RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FOXK2 (Homo sapiens)

Ensembl gene IDs: ENSG00000141568

Ensembl transcript IDs: ENST00000335255.10, ENST00000473637.6, ENST00000526383.2, ENST00000527313.6, ENST00000529652.1, ENST00000531030.5, ENST00000570585.1, ENST00000571160.1, ENST00000571989.1, ENST00000574694.1, ENST00000575578.1, ENST00000624186.1

Found 634 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGGCCCTCGGCCGGCACACTCGGGAAGGGCCAGCGGTTTTCTTCCTaGGGAGCCGGGCGAGGAGGTGCAGGGACCTCCCACTCTCATTCC +
Preference number: 1 (lower is better)
Translates to: RPSAGTLGKGQRFSS*GAGRGGAGTSHSHS
Trigger: GGAATGAGAGTGGGAGGTCCCTGCACCTCCTCGCCCGGCTCCTCAGGAAGAAAACCGCTGGCCCTTCCCGAGTGTGCCGGCCGAGGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR GCA 90 bp TTCACAGCGACGCAGCTGAGGACGACGCAGGACCTCTCCCAAAGGTaGTGCAGCTCCAGCACCAGGGGCCAGGGCTGCGGCGACAGCAGC +
Preference number: 1 (lower is better)
Translates to: FTATQLRTTQDLSQR*CSSSTRGQGCGDSS
Trigger: GCTGCTGTCGCCGCAGCCCTGGCCCCTGGTGCTGGAGCTGCAGCACCTTTGGGAGAGGTCCTGCGTCGTCCTCAGCTGCGTCGCTGTGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR GCA 90 bp GGTGTGAGCTGGGCAAACCCCGTGACCACCTCAGATGCTCCTCCCTaGAATCGCGGTCGCAGTCTGTGGCCGCAGGTGTGGCCTCAACCG +
Preference number: 1 (lower is better)
Translates to: GVSWANPVTTSDAPP*NRGRSLWPQVWPQP
Trigger: CGGTTGAGGCCACACCTGCGGCCACAGACTGCGACCGCGATTGCAGGGAGGAGCATCTGAGGTGGTCACGGGGTTTGCCCAGCTCACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR GCA 90 bp CTCCGGCTGGTCACCGTTGTGGCGCTTTGTGGGCAGGGAGGCCGATaGGGATGCGTGTGTTGCCAACATGTGCAAAGGACTCGCCGCGGC +
Preference number: 1 (lower is better)
Translates to: LRLVTVVALCGQGGR*GCVCCQHVQRTRRG
Trigger: GCCGCGGCGAGTCCTTTGCACATGTTGGCAACACACGCATCCGCATCGGCCTCCCTGCCCACAAAGCGCCACAACGGTGACCAGCCGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR GCA 90 bp ACGATGCCCTCGCCGTCTTCTGTCTTGATCCGCTTCAGCTCCGGCTaGTCCGGCTGGTCACCGTTGTGGCGCTTTGTGGGCAGGGAGGCC +
Preference number: 1 (lower is better)
Translates to: TMPSPSSVLIRFSSG*SGWSPLWRFVGREA
Trigger: GGCCTCCCTGCCCACAAAGCGCCACAACGGTGACCAGCCGGAGCAGCCGGAGCTGAAGCGGATCAAGACAGAAGACGGCGAGGGCATCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR CCA 90 bp AGCTCGGTGAGTCCCGGCAGTTCCTTCCCGGCACTGGCTCGTCCCTaGGTTCTCAAGGTTCCATGCGGCCACAGCGTCCGTCCACCTGTC +
Preference number: 1 (lower is better)
Translates to: SSVSPGSSFPALARP*VLKVPCGHSVRPPV
Trigger: GACAGGTGGACGGACGCTGTGGCCGCATGGAACCTTGAGAACCCAGGGACGAGCCAGTGCCGGGAAGGAACTGCCGGGACTCACCGAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
3UTR CCA 90 bp GTCTTGATCCGCTTCAGCTCCGGCTGCTCCGGCTGGTCACCGTTGTaGCGCTTTGTGGGCAGGGAGGCCGATGCGGATGCGTGTGTTGCC +
Preference number: 1 (lower is better)
Translates to: VLIRFSSGCSGWSPL*RFVGREADADACVA
Trigger: GGCAACACACGCATCCGCATCGGCCTCCCTGCCCACAAAGCGCCACAACGGTGACCAGCCGGAGCAGCCGGAGCTGAAGCGGATCAAGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR GCA 90 bp AGTTCCTTCCCGGCACTGGCTCGTCCCTGGGTTCTCAAGGTTCCATaGGGCCACAGCGTCCGTCCACCTGTCCACGCGAGCCACATGCTG +
Preference number: 1 (lower is better)
Translates to: SSFPALARPWVLKVP*GHSVRPPVHASHML
Trigger: CAGCATGTGGCTCGCGTGGACAGGTGGACGGACGCTGTGGCCGCATGGAACCTTGAGAACCCAGGGACGAGCCAGTGCCGGGAAGGAACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
3UTR GCA 90 bp GGCTGCAGTTGGTGTGAGCTGGGCAAACCCCGTGACCACCTCAGATaGTCCTCCCTGCAATCGCGGTCGCAGTCTGTGGCCGCAGGTGTG +
Preference number: 1 (lower is better)
Translates to: GCSWCELGKPRDHLR*SSLQSRSQSVAAGV
Trigger: CACACCTGCGGCCACAGACTGCGACCGCGATTGCAGGGAGGAGCATCTGAGGTGGTCACGGGGTTTGCCCAGCTCACACCAACTGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR CCA 90 bp TCCTACCACAAAACAGGAAATGCCCCAGACGTGCCCTGCAGGACGTaGCTCGGACCCTGCTCCACCATGGCGGCCGCTCACCGAAGGTGG +
Preference number: 1 (lower is better)
Translates to: SYHKTGNAPDVPCRT*LGPCSTMAAAHRRW
Trigger: CCACCTTCGGTGAGCGGCCGCCATGGTGGAGCAGGGTCCGAGCCACGTCCTGCAGGGCACGTCTGGGGCATTTCCTGTTTTGTGGTAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR CCA 90 bp TCGCCGTCTTCTGTCTTGATCCGCTTCAGCTCCGGCTGCTCCGGCTaGTCACCGTTGTGGCGCTTTGTGGGCAGGGAGGCCGATGCGGAT +
Preference number: 1 (lower is better)
Translates to: SPSSVLIRFSSGCSG*SPLWRFVGREADAD
Trigger: ATCCGCATCGGCCTCCCTGCCCACAAAGCGCCACAACGGTGACCAGCCGGAGCAGCCGGAGCTGAAGCGGATCAAGACAGAAGACGGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR GCA 90 bp GACCTCTCCCAAAGGTGCTGCAGCTCCAGCACCAGGGGCCAGGGCTaGGGCGACAGCAGCTCAGCAACCCTTGCTGTGCTCAAGTTCTTG +
Preference number: 1 (lower is better)
Translates to: DLSQRCCSSSTRGQG*GDSSSATLAVLKFL
Trigger: CAAGAACTTGAGCACAGCAAGGGTTGCTGAGCTGCTGTCGCCGCAGCCCTGGCCCCTGGTGCTGGAGCTGCAGCACCTTTGGGAGAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR GCA 90 bp CTGGTCACCGTTGTGGCGCTTTGTGGGCAGGGAGGCCGATGCGGATaGGTGTGTTGCCAACATGTGCAAAGGACTCGCCGCGGCTGCAGT +
Preference number: 1 (lower is better)
Translates to: LVTVVALCGQGGRCG*VCCQHVQRTRRGCS
Trigger: ACTGCAGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACACGCATCCGCATCGGCCTCCCTGCCCACAAAGCGCCACAACGGTGACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR GCA 90 bp AAGCTCTCCCGGTCGCTAGTTCTGGACACCCTTTTCCCTTACGGCTaGCGGTGGCGTGTCCACGCTCAGGGCAATGACGATGCCCTCGCC +
Preference number: 1 (lower is better)
Translates to: KLSRSLVLDTLFPYG*RWRVHAQGNDDALA
Trigger: GGCGAGGGCATCGTCATTGCCCTGAGCGTGGACACGCCACCGGCAGCCGTAAGGGAAAAGGGTGTCCAGAACTAGCGACCGGGAGAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR GCA 90 bp AGGGACATTTCCTACCACAAAACAGGAAATGCCCCAGACGTGCCCTaGAGGACGTGGCTCGGACCCTGCTCCACCATGGCGGCCGCTCAC +
Preference number: 1 (lower is better)
Translates to: RDISYHKTGNAPDVP*RTWLGPCSTMAAAH
Trigger: GTGAGCGGCCGCCATGGTGGAGCAGGGTCCGAGCCACGTCCTGCAGGGCACGTCTGGGGCATTTCCTGTTTTGTGGTAGGAAATGTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR GCA 90 bp GTTGTGGCGCTTTGTGGGCAGGGAGGCCGATGCGGATGCGTGTGTTaGCAACATGTGCAAAGGACTCGCCGCGGCTGCAGTTGGTGTGAG +
Preference number: 1 (lower is better)
Translates to: VVALCGQGGRCGCVC*QHVQRTRRGCSWCE
Trigger: CTCACACCAACTGCAGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACACGCATCCGCATCGGCCTCCCTGCCCACAAAGCGCCACAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR TCA 90 bp ACACTGAGGAACACAGTGGAGAGCGGGAGTTCACAGCGACGCAGCTaGGGACGACGCAGGACCTCTCCCAAAGGTGCTGCAGCTCCAGCA +
Preference number: 1 (lower is better)
Translates to: TLRNTVESGSSQRRS*GRRRTSPKGAAAPA
Trigger: TGCTGGAGCTGCAGCACCTTTGGGAGAGGTCCTGCGTCGTCCTCAGCTGCGTCGCTGTGAACTCCCGCTCTCCACTGTGTTCCTCAGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR GCA 90 bp AAGATGCAGACAGCTGCACCGAGGGGCTCTGATCCATCCACACGCTaGGCTTTGCTGCGGTCACACACACGGTCTCAGTCACGTGATGGT +
Preference number: 1 (lower is better)
Translates to: KMQTAAPRGSDPSTR*ALLRSHTRSQSRDG
Trigger: ACCATCACGTGACTGAGACCGTGTGTGTGACCGCAGCAAAGCGCAGCGTGTGGATGGATCAGAGCCCCTCGGTGCAGCTGTCTGCATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR GCA 90 bp ACCTGTCGTTTCTCATCCCAGGTTCCGGGCTGCCGGAAAAGGCTTTaGTCTTGTCTCCAGAAGCACCTGCTGGTCTGTCTGGATGGGGCC +
Preference number: 1 (lower is better)
Translates to: TCRFSSQVPGCRKRL*SCLQKHLLVCLDGA
Trigger: GGCCCCATCCAGACAGACCAGCAGGTGCTTCTGGAGACAAGAGCAAAGCCTTTTCCGGCAGCCCGGAACCTGGGATGAGAAACGACAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR TCA 90 bp GCTAGTGTGCAGTCATTTCATACCTTTCAATGGGCGTCACCGCAGTaGCGCTGCCCCAGCCCCATGCTGAGGGCCGACACAATTCACGGA +
Preference number: 1 (lower is better)
Translates to: ASVQSFHTFQWASPQ*RCPSPMLRADTIHG
Trigger: TCCGTGAATTGTGTCGGCCCTCAGCATGGGGCTGGGGCAGCGTCACTGCGGTGACGCCCATTGAAAGGTATGAAATGACTGCACACTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR GCA 90 bp AGACAGCTGCACCGAGGGGCTCTGATCCATCCACACGCTGCGCTTTaGTGCGGTCACACACACGGTCTCAGTCACGTGATGGTTTTGCTT +
Preference number: 1 (lower is better)
Translates to: RQLHRGALIHPHAAL*CGHTHGLSHVMVLL
Trigger: AAGCAAAACCATCACGTGACTGAGACCGTGTGTGTGACCGCAGCAAAGCGCAGCGTGTGGATGGATCAGAGCCCCTCGGTGCAGCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR CCA 90 bp GTCTCCTATCAATCAGAGAACCCCATCAGCTGTGACCAACAGAGCTaGAGCCCTCTGTGGAGGGAGCTGACCCCACACACAGGACAGAGC +
Preference number: 1 (lower is better)
Translates to: VSYQSENPISCDQQS*SPLWRELTPHTGQS
Trigger: GCTCTGTCCTGTGTGTGGGGTCAGCTCCCTCCACAGAGGGCTCCAGCTCTGTTGGTCACAGCTGATGGGGTTCTCTGATTGATAGGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR CCA 90 bp GTAGGCCAGAGATGCACAGACGCGCAGTGTGACTCTGGTTTCCAGTaGCCTTTCTCCTACGCTGACTCGGAACAGCATCCACGCTGTAGG +
Preference number: 1 (lower is better)
Translates to: VGQRCTDAQCDSGFQ*PFSYADSEQHPRCR
Trigger: CCTACAGCGTGGATGCTGTTCCGAGTCAGCGTAGGAGAAAGGCCACTGGAAACCAGAGTCACACTGCGCGTCTGTGCATCTCTGGCCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR GCA 90 bp TCTGGACAACCTTCCACCTGTCGTTTCTCATCCCAGGTTCCGGGCTaGCGGAAAAGGCTTTGCTCTTGTCTCCAGAAGCACCTGCTGGTC +
Preference number: 1 (lower is better)
Translates to: SGQPSTCRFSSQVPG*RKRLCSCLQKHLLV
Trigger: GACCAGCAGGTGCTTCTGGAGACAAGAGCAAAGCCTTTTCCGGCAGCCCGGAACCTGGGATGAGAAACGACAGGTGGAAGGTTGTCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR CCA 90 bp TCAGAGAACCCCATCAGCTGTGACCAACAGAGCTGGAGCCCTCTGTaGAGGGAGCTGACCCCACACACAGGACAGAGCAGAATCCTGATT +
Preference number: 1 (lower is better)
Translates to: SENPISCDQQSWSPL*RELTPHTGQSRILI
Trigger: AATCAGGATTCTGCTCTGTCCTGTGTGTGGGGTCAGCTCCCTCCACAGAGGGCTCCAGCTCTGTTGGTCACAGCTGATGGGGTTCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR CCA 90 bp GTGACCACCTCAGATGCTCCTCCCTGCAATCGCGGTCGCAGTCTGTaGCCGCAGGTGTGGCCTCAACCGACTCTAATGTGTCTACAAAAA +
Preference number: 1 (lower is better)
Translates to: VTTSDAPPCNRGRSL*PQVWPQPTLMCLQK
Trigger: TTTTTGTAGACACATTAGAGTCGGTTGAGGCCACACCTGCGGCCACAGACTGCGACCGCGATTGCAGGGAGGAGCATCTGAGGTGGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR GCA 90 bp AGACAAAAATATACATTCCAAGGTATCTGTAAAGTGCTTGGAAGATaGAGACAGCTGCACCGAGGGGCTCTGATCCATCCACACGCTGCG +
Preference number: 1 (lower is better)
Translates to: RQKYTFQGICKVLGR*RQLHRGALIHPHAA
Trigger: CGCAGCGTGTGGATGGATCAGAGCCCCTCGGTGCAGCTGTCTGCATCTTCCAAGCACTTTACAGATACCTTGGAATGTATATTTTTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR TCA 90 bp ACGGAAAGGGCCTGTGTGATTCTGAAAGTCTCAGTAGAAATGGAGTaGTGTGAAATGCCCAAGACCCCATTATTTTGTAAAGAAAGGACA +
Preference number: 1 (lower is better)
Translates to: TERACVILKVSVEME*CEMPKTPLFCKERT
Trigger: TGTCCTTTCTTTACAAAATAATGGGGTCTTGGGCATTTCACATCACTCCATTTCTACTGAGACTTTCAGAATCACACAGGCCCTTTCCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
3UTR-3UTR GCA 90 bp CCCTCGGCCCTCGGCCGGCACACTCGGGAAGGGCCAGCGGTTTTCTTCCTGAGGCCAACCACAGGGCCCTaGACCCCCGAGTGCTGGCGG +
Preference number: 2 (lower is better)
Translates to: PSALGRHTREGPAVFFLRPTTGP*TPECWR
Trigger: CCGCCAGCACTCGGGGGTGCAGGGCCCTGTGGTTGG...CCTCAGGAAGAAAACCGCTGGCCCTTCCCGAGTGTGCCGGCCGAGGGCCGAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR-3UTR CCA 90 bp GCTGACGCCCTCTCCCCATGTGCACGGCCCTCGGCCCTCGGCCGGCACACTCGGGCCGCTCACCGAAGGTaGGGAGTAGACAGCAGGTCA +
Preference number: 2 (lower is better)
Translates to: ADALSPCARPSALGRHTRAAHRR*GVDSRS
Trigger: TGACCTGCTGTCTACTCCCCACCTTCGGTGAGCGGC...CCGAGTGTGCCGGCCGAGGGCCGAGGGCCGTGCACATGGGGAGAGGGCGTCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR-3UTR CCA 90 bp GCTGCCGGTGGCGTGTCCACGCTCAGGGCAATGACGATGCCCTCGCCGTCTTCTTGCACCCCCGAGTGCTaGCGGGAGGCCGCGTCTCCT +
Preference number: 2 (lower is better)
Translates to: AAGGVSTLRAMTMPSPSSCTPEC*REAASP
Trigger: AGGAGACGCGGCCTCCCGCCAGCACTCGGGGGTGCA...AGAAGACGGCGAGGGCATCGTCATTGCCCTGAGCGTGGACACGCCACCGGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR-3UTR GCA 90 bp AGAGCGGGAGTTCACAGCGACGCAGCTGAGGACGACGCAGGACCTCTCCCAAAGCGCCCTCTCCCCATGTaGACGGCCCTCGGCCCTCGG +
Preference number: 2 (lower is better)
Translates to: RAGVHSDAAEDDAGPLPKRPLPM*TALGPR
Trigger: CCGAGGGCCGAGGGCCGTGCACATGGGGAGAGGGCG...CTTTGGGAGAGGTCCTGCGTCGTCCTCAGCTGCGTCGCTGTGAACTCCCGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR-3UTR CCA 90 bp GAGTCCCGGCAGTTCCTTCCCGGCACTGGCTCGTCCCTGGGTTCTCAAGGTTCCTGCACCCCCGAGTGCTaGCGGGAGGCCGCGTCTCCT +
Preference number: 2 (lower is better)
Translates to: ESRQFLPGTGSSLGSQGSCTPEC*REAASP
Trigger: AGGAGACGCGGCCTCCCGCCAGCACTCGGGGGTGCA...GGAACCTTGAGAACCCAGGGACGAGCCAGTGCCGGGAAGGAACTGCCGGGACTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
3UTR-3UTR CCA 90 bp GTGCACGGCCCTCGGCCCTCGGCCGGCACACTCGGGAAGGGCCAGCGGTTTTCTTCACACAGCGATGCCTaGTCCTCGCGGGAGGACAGA +
Preference number: 2 (lower is better)
Translates to: VHGPRPSAGTLGKGQRFSSHSDA*SSREDR
Trigger: TCTGTCCTCCCGCGAGGACCAGGCATCGCTGTGTGA...AGAAAACCGCTGGCCCTTCCCGAGTGTGCCGGCCGAGGGCCGAGGGCCGTGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR-3UTR TCA 90 bp GCTGACGCCCTCTCCCCATGTGCACGGCCCTCGGCCCTCGGCCGGCACACTCGGGAGAGACCTGGGATCTaGGTTTCAAAAGGGCCTGTG +
Preference number: 2 (lower is better)
Translates to: ADALSPCARPSALGRHTRERPGI*VSKGPV
Trigger: CACAGGCCCTTTTGAAACTCAGATCCCAGGTCTCTC...CCGAGTGTGCCGGCCGAGGGCCGAGGGCCGTGCACATGGGGAGAGGGCGTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR-3UTR GCA 90 bp TGGTCACCGTTGTGGCGCTTTGTGGGCAGGGAGGCCGATGCGGATGCGTGTGTTCCAACCACAGGGCCCTaGACCCCCGAGTGCTGGCGG +
Preference number: 2 (lower is better)
Translates to: WSPLWRFVGREADADACVPTTGP*TPECWR
Trigger: CCGCCAGCACTCGGGGGTGCAGGGCCCTGTGGTTGG...AACACACGCATCCGCATCGGCCTCCCTGCCCACAAAGCGCCACAACGGTGACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR-3UTR GCA 90 bp GTGCACGGCCCTCGGCCCTCGGCCGGCACACTCGGGAAGGGCCAGCGGTTTTCTGTTCTCAAGGTTCCATaGGGCCACAGCGTCCGTCCA +
Preference number: 2 (lower is better)
Translates to: VHGPRPSAGTLGKGQRFSVLKVP*GHSVRP
Trigger: TGGACGGACGCTGTGGCCGCATGGAACCTTGAGAAC...AGAAAACCGCTGGCCCTTCCCGAGTGTGCCGGCCGAGGGCCGAGGGCCGTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR-3UTR GCA 90 bp TCGCGGGAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGGTGCTCCCCTGCACCCCCGAGTaGTGGCGGGAGGCCGCGTCT +
Preference number: 2 (lower is better)
Translates to: SREDRVSLVGRSSAQQVLPCTPE*WREAAS
Trigger: AGACGCGGCCTCCCGCCAGCACTCGGGGGTGCAGGG...GAGCACCTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTCCCGCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
3UTR-3UTR CCA 90 bp GTGCACGGCCCTCGGCCCTCGGCCGGCACACTCGGGAAGGGCCAGCGGTTTTCTCCAGCAGGTGCTCAGTaGAGACACCGTCTCCCAAAT +
Preference number: 2 (lower is better)
Translates to: VHGPRPSAGTLGKGQRFSPAGAQ*RHRLPN
Trigger: ATTTGGGAGACGGTGTCTCCACTGAGCACCTGCTGG...AGAAAACCGCTGGCCCTTCCCGAGTGTGCCGGCCGAGGGCCGAGGGCCGTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR-3UTR CCA 90 bp GCAGTTCCTTCCCGGCACTGGCTCGTCCCTGGGTTCTCAAGGTTCCATGCGGCCCGCCGCGGCTGCAGTTaGTGTGAGCTGGGCAAACCC +
Preference number: 2 (lower is better)
Translates to: AVPSRHWLVPGFSRFHAARRGCS*CELGKP
Trigger: GGGTTTGCCCAGCTCACACCAACTGCAGCCGCGGCG...GGCCGCATGGAACCTTGAGAACCCAGGGACGAGCCAGTGCCGGGAAGGAACTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR CAA 90 bp TCCGCTTCAGCTCCGGCTGCTCCGGCTGGTCACCGTTGTGGCGCTTaGTGGGCAGGGAGGCCGATGCGGATGCGTGTGTTGCCAACATGT +
Preference number: 2 (lower is better)
Translates to: SASAPAAPAGHRCGA*WAGRPMRMRVLPTC
Trigger: ACATGTTGGCAACACACGCATCCGCATCGGCCTCCCTGCCCACAAAGCGCCACAACGGTGACCAGCCGGAGCAGCCGGAGCTGAAGCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR CAA 90 bp TCTGTCTTGATCCGCTTCAGCTCCGGCTGCTCCGGCTGGTCACCGTaGTGGCGCTTTGTGGGCAGGGAGGCCGATGCGGATGCGTGTGTT +
Preference number: 2 (lower is better)
Translates to: SVLIRFSSGCSGWSP*WRFVGREADADACV
Trigger: AACACACGCATCCGCATCGGCCTCCCTGCCCACAAAGCGCCACAACGGTGACCAGCCGGAGCAGCCGGAGCTGAAGCGGATCAAGACAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR CAA 90 bp GTGTCCACGCTCAGGGCAATGACGATGCCCTCGCCGTCTTCTGTCTaGATCCGCTTCAGCTCCGGCTGCTCCGGCTGGTCACCGTTGTGG +
Preference number: 2 (lower is better)
Translates to: VSTLRAMTMPSPSSV*IRFSSGCSGWSPLW
Trigger: CCACAACGGTGACCAGCCGGAGCAGCCGGAGCTGAAGCGGATCAAGACAGAAGACGGCGAGGGCATCGTCATTGCCCTGAGCGTGGACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR-3UTR GCA 90 bp GAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGGTGCTCAGTGGACCCTGCACCCCCGAGTaGTGGCGGGAGGCCGCGTCT +
Preference number: 2 (lower is better)
Translates to: EDRVSLVGRSSAQQVLSGPCTPE*WREAAS
Trigger: AGACGCGGCCTCCCGCCAGCACTCGGGGGTGCAGGG...TCCACTGAGCACCTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
3UTR-3UTR CCA 90 bp GCAACCGAGGATCATGCCGCACACACTCTGAGTGCACCACGTGACGTGGGTCATGTGCCCTGCAGGACGTaGCTCGGACCCTGCTCCACC +
Preference number: 2 (lower is better)
Translates to: ATEDHAAHTLSAPRDVGHVPCRT*LGPCST
Trigger: GGTGGAGCAGGGTCCGAGCCACGTCCTGCAGGGCAC...ATGACCCACGTCACGTGGTGCACTCAGAGTGTGTGCGGCATGATCCTCGGTTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR-3UTR TCA 90 bp CAGGCTGACGCCCTCTCCCCATGTGCACGGCCCTCGGCCCTCGGCCGGCACACTTCAGTAGAAATGGAGTaGTGTGAAATGCCCAAGACC +
Preference number: 2 (lower is better)
Translates to: QADALSPCARPSALGRHTSVEME*CEMPKT
Trigger: GGTCTTGGGCATTTCACATCACTCCATTTCTACTGA...AGTGTGCCGGCCGAGGGCCGAGGGCCGTGCACATGGGGAGAGGGCGTCAGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR-3UTR TCA 90 bp AGGACAATGACGGAAGTGGGTAGACGACTGAAGGAGATCAGCTGTCCACCGCGTTGGGCGTCACCGCAGTaGCGCTGCCCCAGCCCCATG +
Preference number: 2 (lower is better)
Translates to: RTMTEVGRRLKEISCPPRWASPQ*RCPSPM
Trigger: CATGGGGCTGGGGCAGCGTCACTGCGGTGACGCCCA...ACGCGGTGGACAGCTGATCTCCTTCAGTCGTCTACCCACTTCCGTCATTGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR-3UTR TCA 90 bp GAGTCCCGGCAGTTCCTTCCCGGCACTGGCTCGTCCCTGGGTTCTCAAGGTTCCGCCTTTCTCCTACGCTaGCTCGGAACAGCATCCACG +
Preference number: 2 (lower is better)
Translates to: ESRQFLPGTGSSLGSQGSAFLLR*LGTAST
Trigger: CGTGGATGCTGTTCCGAGTCAGCGTAGGAGAAAGGC...GGAACCTTGAGAACCCAGGGACGAGCCAGTGCCGGGAAGGAACTGCCGGGACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR-3UTR GCA 90 bp AGTTCTGGACACCCTTTTCCCTTACGGCTGCCGGTGGCGTGTCCACGCTCAGGGTCCACATGTCTCCGCTaGCTGGTGGGTCCTGTGAGG +
Preference number: 2 (lower is better)
Translates to: SSGHPFPLRLPVACPRSGSTCLR*LVGPVR
Trigger: CCTCACAGGACCCACCAGGCAGCGGAGACATGTGGA...CCCTGAGCGTGGACACGCCACCGGCAGCCGTAAGGGAAAAGGGTGTCCAGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR-3UTR GCA 90 bp AGTTCTGGACACCCTTTTCCCTTACGGCTGCCGGTGGCGTGTCCACGCTCAGGGGCGGTAGGCCAGAGATaGACAGACGCGCAGTGTGAC +
Preference number: 2 (lower is better)
Translates to: SSGHPFPLRLPVACPRSGAVGQR*TDAQCD
Trigger: GTCACACTGCGCGTCTGTGCATCTCTGGCCTACCGC...CCCTGAGCGTGGACACGCCACCGGCAGCCGTAAGGGAAAAGGGTGTCCAGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR-3UTR GCA 90 bp CGTGTCCACGCTCAGGGCAATGACGATGCCCTCGCCGTCTTCTGTCTTGATCCGGGGCAGGGAGGCCGATaGGGATGCGTGTGTTGCCAA +
Preference number: 2 (lower is better)
Translates to: RVHAQGNDDALAVFCLDPGQGGR*GCVCCQ
Trigger: TTGGCAACACACGCATCCGCATCGGCCTCCCTGCCC...CGGATCAAGACAGAAGACGGCGAGGGCATCGTCATTGCCCTGAGCGTGGACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR-3UTR CCA 90 bp CCACAGCGTCCGTCCACCTGTCCACGCGAGCCACATGCTGAAATGGAGGTGGATGGCTGGTCACCGTTGTaGCGCTTTGTGGGCAGGGAG +
Preference number: 2 (lower is better)
Translates to: PQRPSTCPREPHAEMEVDGWSPL*RFVGRE
Trigger: CTCCCTGCCCACAAAGCGCCACAACGGTGACCAGCC...ATCCACCTCCATTTCAGCATGTGGCTCGCGTGGACAGGTGGACGGACGCTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR-3UTR TCA 90 bp GATGCGGATGCGTGTGTTGCCAACATGTGCAAAGGACTCGCCGCGGCTGCAGTTGCTGGGCAAACCCCGTaGCCACCTCAGATGCTCCTC +
Preference number: 2 (lower is better)
Translates to: DADACVANMCKGLAAAAVAGQTP*PPQMLL
Trigger: GAGGAGCATCTGAGGTGGTCACGGGGTTTGCCCAGC...AACTGCAGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACACGCATCCGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR-3UTR GCA 90 bp ACCGCGTACTCTACTAAAGTGAGAGGAGGAGCAACCGAGGATCATGCCGCACACACGTGGCTCGGACCCTaGTCCACCATGGCGGCCGCT +
Preference number: 2 (lower is better)
Translates to: TAYSTKVRGGATEDHAAHTWLGP*STMAAA
Trigger: AGCGGCCGCCATGGTGGAGCAGGGTCCGAGCCACGT...GTGTGCGGCATGATCCTCGGTTGCTCCTCCTCTCACTTTAGTAGAGTACGCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR-3UTR GCA 90 bp TGCAGTCATTTCATACCTTTCAATGGGCGTCACCGCAGTGACGCTGCCCCAGCCAGCCGGGCGAGGAGGTaGAGGGACCTCCCACTCTCA +
Preference number: 2 (lower is better)
Translates to: CSHFIPFNGRHRSDAAPASRARR*RDLPLS
Trigger: TGAGAGTGGGAGGTCCCTGCACCTCCTCGCCCGGCT...GGCTGGGGCAGCGTCACTGCGGTGACGCCCATTGAAAGGTATGAAATGACTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR-3UTR TCA 90 bp ACAGCAGGCGCTGGCCGTGCCGTCCTCACACAGCGATGCCTGGTCCTCGCGGGAAGAAATGGAGTGATGTaGAATGCCCAAGACCCCATT +
Preference number: 2 (lower is better)
Translates to: TAGAGRAVLTQRCLVLAGRNGVM*NAQDPI
Trigger: AATGGGGTCTTGGGCATTTCACATCACTCCATTTCT...TCCCGCGAGGACCAGGCATCGCTGTGTGAGGACGGCACGGCCAGCGCCTGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
3UTR-3UTR GCA 90 bp GCTGCCGGTGGCGTGTCCACGCTCAGGGCAATGACGATGCCCTCGCCGTCTTCTTGCCGGAAAAGGCTTTaGTCTTGTCTCCAGAAGCAC +
Preference number: 2 (lower is better)
Translates to: AAGGVSTLRAMTMPSPSSCRKRL*SCLQKH
Trigger: GTGCTTCTGGAGACAAGAGCAAAGCCTTTTCCGGCA...AGAAGACGGCGAGGGCATCGTCATTGCCCTGAGCGTGGACACGCCACCGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR-3UTR CCA 90 bp TGGTCCTCGCGGGAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGTCACACAGCGATGCCTaGTCCTCGCGGGAGGACAGA +
Preference number: 2 (lower is better)
Translates to: WSSREDRVSLVGRSSAQQSHSDA*SSREDR
Trigger: TCTGTCCTCCCGCGAGGACCAGGCATCGCTGTGTGA...CTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTCCCGCGAGGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
3UTR-3UTR CCA 90 bp GAGTCCCGGCAGTTCCTTCCCGGCACTGGCTCGTCCCTGGGTTCTCAAGGTTCCGACTCTGGTTTCCAGTaGCCTTTCTCCTACGCTGAC +
Preference number: 2 (lower is better)
Translates to: ESRQFLPGTGSSLGSQGSDSGFQ*PFSYAD
Trigger: GTCAGCGTAGGAGAAAGGCCACTGGAAACCAGAGTC...GGAACCTTGAGAACCCAGGGACGAGCCAGTGCCGGGAAGGAACTGCCGGGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR CAA 90 bp CAGACAGCTGCACCGAGGGGCTCTGATCCATCCACACGCTGCGCTTaGCTGCGGTCACACACACGGTCTCAGTCACGTGATGGTTTTGCT +
Preference number: 2 (lower is better)
Translates to: QTAAPRGSDPSTRCA*LRSHTRSQSRDGFA
Trigger: AGCAAAACCATCACGTGACTGAGACCGTGTGTGTGACCGCAGCAAAGCGCAGCGTGTGGATGGATCAGAGCCCCTCGGTGCAGCTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR CAA 90 bp CACCTGTCGTTTCTCATCCCAGGTTCCGGGCTGCCGGAAAAGGCTTaGCTCTTGTCTCCAGAAGCACCTGCTGGTCTGTCTGGATGGGGC +
Preference number: 2 (lower is better)
Translates to: HLSFLIPGSGLPEKA*LLSPEAPAGLSGWG
Trigger: GCCCCATCCAGACAGACCAGCAGGTGCTTCTGGAGACAAGAGCAAAGCCTTTTCCGGCAGCCCGGAACCTGGGATGAGAAACGACAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR-3UTR GCA 90 bp CGTGTGCACCTTCCATCTGTGAGAGGCACACTTCAGTCTGGGTTCAAGATGCAGAGCAGGCGCTGGCCGTaGCGTCCTCACACAGCGATG +
Preference number: 2 (lower is better)
Translates to: RVHLPSVRGTLQSGFKMQSRRWP*RPHTAM
Trigger: CATCGCTGTGTGAGGACGGCACGGCCAGCGCCTGCT...CTGCATCTTGAACCCAGACTGAAGTGTGCCTCTCACAGATGGAAGGTGCACACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR-3UTR GCA 90 bp GATGCGGATGCGTGTGTTGCCAACATGTGCAAAGGACTCGCCGCGGCTGCAGTTGTCTCCAGAAGCACCTaGTGGTCTGTCTGGATGGGG +
Preference number: 2 (lower is better)
Translates to: DADACVANMCKGLAAAAVVSRST*WSVWMG
Trigger: CCCCATCCAGACAGACCAGCAGGTGCTTCTGGAGAC...AACTGCAGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACACGCATCCGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR-3UTR GCA 90 bp AATCGCGGTCGCAGTCTGTGGCCGCAGGTGTGGCCTCAACCGACTCTAATGTGTTCCCAGGTTCCGGGCTaGCGGAAAAGGCTTTGCTCT +
Preference number: 2 (lower is better)
Translates to: NRGRSLWPQVWPQPTLMCSQVPG*RKRLCS
Trigger: AGAGCAAAGCCTTTTCCGGCAGCCCGGAACCTGGGA...ACACATTAGAGTCGGTTGAGGCCACACCTGCGGCCACAGACTGCGACCGCGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR-3UTR GCA 90 bp CCCAGCAGGTGCTCAGTGGAGACACCGTCTCCCAAATCAGGTTTTGTTGTGTGTCGCTTCAGCTCCGGCTaGTCCGGCTGGTCACCGTTG +
Preference number: 2 (lower is better)
Translates to: PSRCSVETPSPKSGFVVCRFSSG*SGWSPL
Trigger: CAACGGTGACCAGCCGGAGCAGCCGGAGCTGAAGCG...ACACACAACAAAACCTGATTTGGGAGACGGTGTCTCCACTGAGCACCTGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR-3UTR TCA 90 bp AAAACGTCTCCAAGGGGACATACGATGCATTTGCTTGGTGTCCCAGCCAAGCTCGCTCAGCCATCAGGCTaGCGCCCTCTCCCCATGTGC +
Preference number: 2 (lower is better)
Translates to: KTSPRGHTMHLLGVPAKLAQPSG*RPLPMC
Trigger: GCACATGGGGAGAGGGCGTCAGCCTGATGGCTGAGC...GAGCTTGGCTGGGACACCAAGCAAATGCATCGTATGTCCCCTTGGAGACGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR-3UTR GCA 90 bp AGGACAATGACGGAAGTGGGTAGACGACTGAAGGAGATCAGCTGTCCACCGCGTCCACACGCTGCGCTTTaGTGCGGTCACACACACGGT +
Preference number: 2 (lower is better)
Translates to: RTMTEVGRRLKEISCPPRPHAAL*CGHTHG
Trigger: ACCGTGTGTGTGACCGCAGCAAAGCGCAGCGTGTGG...ACGCGGTGGACAGCTGATCTCCTTCAGTCGTCTACCCACTTCCGTCATTGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR-3UTR CCA 90 bp CGCAGTGTGACTCTGGTTTCCAGTGGCCTTTCTCCTACGCTGACTCGGAACAGCTCCAGAAGCACCTGCTaGTCTGTCTGGATGGGGCCT +
Preference number: 2 (lower is better)
Translates to: RSVTLVSSGLSPTLTRNSSRSTC*SVWMGP
Trigger: AGGCCCCATCCAGACAGACCAGCAGGTGCTTCTGGA...GCTGTTCCGAGTCAGCGTAGGAGAAAGGCCACTGGAAACCAGAGTCACACTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR-3UTR TCA 90 bp CCACAGCGTCCGTCCACCTGTCCACGCGAGCCACATGCTGAAATGGAGGTGGATTTGGGTTTTCAGTGCTaGGAGGTGAAGTCCAACCAC +
Preference number: 2 (lower is better)
Translates to: PQRPSTCPREPHAEMEVDLGFQC*EVKSNH
Trigger: GTGGTTGGACTTCACCTCTCAGCACTGAAAACCCAA...ATCCACCTCCATTTCAGCATGTGGCTCGCGTGGACAGGTGGACGGACGCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
3UTR-3UTR TCA 90 bp GCCACTGCGGTAGGCCAGAGATGCACAGACGCGCAGTGTGACTCTGGTTTCCAGTTGGGTTTTCAGTGCTaGGAGGTGAAGTCCAACCAC +
Preference number: 2 (lower is better)
Translates to: ATAVGQRCTDAQCDSGFQLGFQC*EVKSNH
Trigger: GTGGTTGGACTTCACCTCTCAGCACTGAAAACCCAA...CTGGAAACCAGAGTCACACTGCGCGTCTGTGCATCTCTGGCCTACCGCAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR-3UTR TCA 90 bp ACCGCGTACTCTACTAAAGTGAGAGGAGGAGCAACCGAGGATCATGCCGCACACTTAAGTGCAGCTCGGTaGGTCCCGGCAGTTCCTTCC +
Preference number: 2 (lower is better)
Translates to: TAYSTKVRGGATEDHAAHLSAAR*VPAVPS
Trigger: GGAAGGAACTGCCGGGACTCACCGAGCTGCACTTAA...GTGTGCGGCATGATCCTCGGTTGCTCCTCCTCTCACTTTAGTAGAGTACGCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR-3UTR GCA 90 bp CGTGTGCACCTTCCATCTGTGAGAGGCACACTTCAGTCTGGGTTCAAGATGCAGCACGCTGCGCTTTGCTaGGGTCACACACACGGTCTC +
Preference number: 2 (lower is better)
Translates to: RVHLPSVRGTLQSGFKMQHAALC*GHTHGL
Trigger: GAGACCGTGTGTGTGACCGCAGCAAAGCGCAGCGTG...CTGCATCTTGAACCCAGACTGAAGTGTGCCTCTCACAGATGGAAGGTGCACACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR-3UTR GCA 90 bp GAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGGTGCTCAGTGGATCAGATGCTCCTCCCTaGAATCGCGGTCGCAGTCTG +
Preference number: 2 (lower is better)
Translates to: EDRVSLVGRSSAQQVLSGSDAPP*NRGRSL
Trigger: CAGACTGCGACCGCGATTGCAGGGAGGAGCATCTGA...TCCACTGAGCACCTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR-3UTR GCA 90 bp CCCAGCAGGTGCTCAGTGGAGACACCGTCTCCCAAATCAGGTTTTGTTGTGTGTCTTTTCCCTTACGGCTaGCGGTGGCGTGTCCACGCT +
Preference number: 2 (lower is better)
Translates to: PSRCSVETPSPKSGFVVCLFPYG*RWRVHA
Trigger: AGCGTGGACACGCCACCGGCAGCCGTAAGGGAAAAG...ACACACAACAAAACCTGATTTGGGAGACGGTGTCTCCACTGAGCACCTGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR-3UTR TCA 90 bp GGACTGAGCTTACACGGGAAAGTCTACCCCCGACTCCTTCTGGATAGTAACATACAGCGGTTTTCTTCCTaGGGAGCCGGGCGAGGAGGT +
Preference number: 2 (lower is better)
Translates to: GLSLHGKVYPRLLLDSNIQRFSS*GAGRGG
Trigger: ACCTCCTCGCCCGGCTCCTCAGGAAGAAAACCGCTG...TATGTTACTATCCAGAAGGAGTCGGGGGTAGACTTTCCCGTGTAAGCTCAGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR-3UTR TCA 90 bp TTCCAGGCCACACCCAGGAAATCTACAAGAGGCGAGAGTATTTTTCCCTCTCAACCCACGGGAATCCCATaGCGGCCGACTCCACGACCA +
Preference number: 2 (lower is better)
Translates to: FQATPRKSTRGESIFPSQPTGIP*RPTPRP
Trigger: TGGTCGTGGAGTCGGCCGTCATGGGATTCCCGTGGG...TTGAGAGGGAAAAATACTCTCGCCTCTTGTAGATTTCCTGGGTGTGGCCTGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575578.1
3UTR-3UTR GCA 90 bp TCATTCCCTCACCCCCGTCCTGTCCTCATTTTCCGTAGAGGAGTCAGCCTCAGGAAGAGAACAGTTAAGTaGAGCTCGGTGAGTCCCGGC +
Preference number: 2 (lower is better)
Translates to: SFPHPRPVLIFRRGVSLRKRTVK*SSVSPG
Trigger: GCCGGGACTCACCGAGCTGCACTTAACTGTTCTCTT...CCTGAGGCTGACTCCTCTACGGAAAATGAGGACAGGACGGGGGTGAGGGAATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR-3UTR GCA 90 bp GCAACCGAGGATCATGCCGCACACACTCTGAGTGCACCACGTGACGTGGGTCATCAGCAACCCTTGCTGTaGTCAAGTTCTTGGGGATTC +
Preference number: 2 (lower is better)
Translates to: ATEDHAAHTLSAPRDVGHQQPLL*SSSWGF
Trigger: GAATCCCCAAGAACTTGAGCACAGCAAGGGTTGCTG...ATGACCCACGTCACGTGGTGCACTCAGAGTGTGTGCGGCATGATCCTCGGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR-3UTR GCA 90 bp AGCTTACACGGGAAAGTCTACCCCCGACTCCTTCTGGATAGTAACATACACAGCTCCACATGTCTCCGCTaGCTGGTGGGTCCTGTGAGG +
Preference number: 2 (lower is better)
Translates to: SLHGKVYPRLLLDSNIHSSTCLR*LVGPVR
Trigger: CCTCACAGGACCCACCAGGCAGCGGAGACATGTGGA...GCTGTGTATGTTACTATCCAGAAGGAGTCGGGGGTAGACTTTCCCGTGTAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR-3UTR CCA 90 bp AAAACGTCTCCAAGGGGACATACGATGCATTTGCTTGGTGTCCCAGCCAAGCTCTGTGACCAACAGAGCTaGAGCCCTCTGTGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: KTSPRGHTMHLLGVPAKLCDQQS*SPLWRE
Trigger: CTCCCTCCACAGAGGGCTCCAGCTCTGTTGGTCACA...GAGCTTGGCTGGGACACCAAGCAAATGCATCGTATGTCCCCTTGGAGACGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR-3UTR TCA 90 bp TCGCGGGAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGGTGCTCTCAGTAGAAATGGAGTaGTGTGAAATGCCCAAGACC +
Preference number: 2 (lower is better)
Translates to: SREDRVSLVGRSSAQQVLSVEME*CEMPKT
Trigger: GGTCTTGGGCATTTCACATCACTCCATTTCTACTGA...GAGCACCTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTCCCGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
3UTR-3UTR TCA 90 bp AGAAACTCTCATCTCTTTTCAGGCAGGTCCTCCCACGGGAATCCCATGACGGCCACCACTTCCCCAGCATaGCTAGATTTCCTGCAGCTT +
Preference number: 2 (lower is better)
Translates to: RNSHLFSGRSSHGNPMTATTSPA*LDFLQL
Trigger: AAGCTGCAGGAAATCTAGTCATGCTGGGGAAGTGGT...GGCCGTCATGGGATTCCCGTGGGAGGACCTGCCTGAAAAGAGATGAGAGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575578.1
3UTR-3UTR CCA 90 bp TCATTCCCTCACCCCCGTCCTGTCCTCATTTTCCGTAGAGGAGTCAGCCTCAGGTACCACGGAGAGACCTaGGATCTGAGTTTCAAAAGG +
Preference number: 2 (lower is better)
Translates to: SFPHPRPVLIFRRGVSLRYHGET*DLSFKR
Trigger: CCTTTTGAAACTCAGATCCCAGGTCTCTCCGTGGTA...CCTGAGGCTGACTCCTCTACGGAAAATGAGGACAGGACGGGGGTGAGGGAATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR-3UTR GCA 90 bp TCATTCCCTCACCCCCGTCCTGTCCTCATTTTCCGTAGAGGAGTCAGCCTCAGGTGTAACACGGAAATGTaGAGATGCCAGAGTAGCTTC +
Preference number: 2 (lower is better)
Translates to: SFPHPRPVLIFRRGVSLRCNTEM*RCQSSF
Trigger: GAAGCTACTCTGGCATCTGCACATTTCCGTGTTACA...CCTGAGGCTGACTCCTCTACGGAAAATGAGGACAGGACGGGGGTGAGGGAATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR-3UTR CCA 90 bp ATACAAACATACCACGGAGAGACCTGGGATCTGAGTTTCAAAAGGGCCTGTGATGTTCCTTCCCGGCACTaGCTCGTCCCTGGGTTCTCA +
Preference number: 2 (lower is better)
Translates to: IQTYHGETWDLSFKRACDVPSRH*LVPGFS
Trigger: TGAGAACCCAGGGACGAGCCAGTGCCGGGAAGGAAC...ATCACAGGCCCTTTTGAAACTCAGATCCCAGGTCTCTCCGTGGTATGTTTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR-3UTR GCA 90 bp GCATTTGCTTGGTGTCCCAGCCAAGCTCCCCACCGGCGACCTCACTGTTCCTTATGGAGTGATGTGAAATaGCCAAGACCCCATTATTTT +
Preference number: 2 (lower is better)
Translates to: AFAWCPSQAPHRRPHCSLWSDVK*PRPHYF
Trigger: AAAATAATGGGGTCTTGGGCATTTCACATCACTCCA...TAAGGAACAGTGAGGTCGCCGGTGGGGAGCTTGGCTGGGACACCAAGCAAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR-3UTR GCA 90 bp TGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGAGTTGATATCGTTAAAGAAATGCGGATGCGTGTGTTaGCAACATGTGCAAAGGACT +
Preference number: 2 (lower is better)
Translates to: WREAASPFGTTELISLKKCGCVC*QHVQRT
Trigger: AGTCCTTTGCACATGTTGGCAACACACGCATCCGCA...TTTCTTTAACGATATCAACTCTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR-3UTR TCA 90 bp AGGACAATGACGGAAGTGGGTAGACGACTGAAGGAGATCAGCTGTCCACCGCGTGGTTTTGTTCAAGTGTaGCTTCTGTCTTTAAGGAGT +
Preference number: 2 (lower is better)
Translates to: RTMTEVGRRLKEISCPPRGFVQV*LLSLRS
Trigger: ACTCCTTAAAGACAGAAGTCACACTTGAACAAAACC...ACGCGGTGGACAGCTGATCTCCTTCAGTCGTCTACCCACTTCCGTCATTGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR CAA 90 bp GCGCTTTGCTGCGGTCACACACACGGTCTCAGTCACGTGATGGTTTaGCTTTTATTTCTTAAACGGCTGAGTGATAATCCAGCTAGTGTG +
Preference number: 2 (lower is better)
Translates to: ALCCGHTHGLSHVMV*LLFLKRLSDNPASV
Trigger: CACACTAGCTGGATTATCACTCAGCCGTTTAAGAAATAAAAGCAAAACCATCACGTGACTGAGACCGTGTGTGTGACCGCAGCAAAGCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR-3UTR GCA 90 bp ACCGCGTACTCTACTAAAGTGAGAGGAGGAGCAACCGAGGATCATGCCGCACACTCTATGGTTTGTTACTaGTCTCGCTTCGATATTCTT +
Preference number: 2 (lower is better)
Translates to: TAYSTKVRGGATEDHAAHSMVCY*SRFDIL
Trigger: AAGAATATCGAAGCGAGAGCAGTAACAAACCATAGA...GTGTGCGGCATGATCCTCGGTTGCTCCTCCTCTCACTTTAGTAGAGTACGCGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR-3UTR CCA 90 bp AAATGGAGTGATGTGAAATGCCCAAGACCCCATTATTTTGTAAAGAAAGGACACGCAGTTGGTGTGAGCTaGGCAAACCCCGTGACCACC +
Preference number: 2 (lower is better)
Translates to: KWSDVKCPRPHYFVKKGHAVGVS*ANPVTT
Trigger: GGTGGTCACGGGGTTTGCCCAGCTCACACCAACTGC...GTGTCCTTTCTTTACAAAATAATGGGGTCTTGGGCATTTCACATCACTCCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR-3UTR TCA 90 bp CGTTGTTTCTTTGCCCCAAATGAAATCCACGGAAAGGGCCTGTGTGATTCTGAAAGAAATGGAGTGATGTaGAATGCCCAAGACCCCATT +
Preference number: 2 (lower is better)
Translates to: RCFFAPNEIHGKGLCDSERNGVM*NAQDPI
Trigger: AATGGGGTCTTGGGCATTTCACATCACTCCATTTCT...TTCAGAATCACACAGGCCCTTTCCGTGGATTTCATTTGGGGCAAAGAAACAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
3UTR TCA 72 bp GCCGGCACACTCGGGAAGGGCCAGCGGTTTTCTTCCTaGGGAGCCGGGCGAGGAGGTGCAGGGACCTCCCAC +
Preference number: 3 (lower is better)
Translates to: AGTLGKGQRFSS*GAGRGGAGTSH
Trigger: GTGGGAGGTCCCTGCACCTCCTCGCCCGGCTCCTCAGGAAGAAAACCGCTGGCCCTTCCCGAGTGTGCCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR CCA 72 bp CGCTTCAGCTCCGGCTGCTCCGGCTGGTCACCGTTGTaGCGCTTTGTGGGCAGGGAGGCCGATGCGGATGCG +
Preference number: 3 (lower is better)
Translates to: RFSSGCSGWSPL*RFVGREADADA
Trigger: CGCATCCGCATCGGCCTCCCTGCCCACAAAGCGCCACAACGGTGACCAGCCGGAGCAGCCGGAGCTGAAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR GCA 72 bp AGTCTTGGGAGACCCACTCACAGCAGGCGCTGGCCGTaGCGTCCTCACACAGCGATGCCTGGTCCTCGCGGG +
Preference number: 3 (lower is better)
Translates to: SLGRPTHSRRWP*RPHTAMPGPRG
Trigger: CCCGCGAGGACCAGGCATCGCTGTGTGAGGACGGCACGGCCAGCGCCTGCTGTGAGTGGGTCTCCCAAGACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
3UTR GCA 72 bp ACAGCAGGCGCTGGCCGTGCCGTCCTCACACAGCGATaGCTGGTCCTCGCGGGAGGACAGAGTTTCACTCGT +
Preference number: 3 (lower is better)
Translates to: TAGAGRAVLTQR*LVLAGGQSFTR
Trigger: ACGAGTGAAACTCTGTCCTCCCGCGAGGACCAGGCATCGCTGTGTGAGGACGGCACGGCCAGCGCCTGCTGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
3UTR GCA 72 bp TGGGCAAACCCCGTGACCACCTCAGATGCTCCTCCCTaGAATCGCGGTCGCAGTCTGTGGCCGCAGGTGTGG +
Preference number: 3 (lower is better)
Translates to: WANPVTTSDAPP*NRGRSLWPQVW
Trigger: CCACACCTGCGGCCACAGACTGCGACCGCGATTGCAGGGAGGAGCATCTGAGGTGGTCACGGGGTTTGCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR CCA 72 bp AGTCCCGGCAGTTCCTTCCCGGCACTGGCTCGTCCCTaGGTTCTCAAGGTTCCATGCGGCCACAGCGTCCGT +
Preference number: 3 (lower is better)
Translates to: SPGSSFPALARP*VLKVPCGHSVR
Trigger: ACGGACGCTGTGGCCGCATGGAACCTTGAGAACCCAGGGACGAGCCAGTGCCGGGAAGGAACTGCCGGGACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
3UTR CCA 72 bp AAAACAGGAAATGCCCCAGACGTGCCCTGCAGGACGTaGCTCGGACCCTGCTCCACCATGGCGGCCGCTCAC +
Preference number: 3 (lower is better)
Translates to: KTGNAPDVPCRT*LGPCSTMAAAH
Trigger: GTGAGCGGCCGCCATGGTGGAGCAGGGTCCGAGCCACGTCCTGCAGGGCACGTCTGGGGCATTTCCTGTTTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR CCA 72 bp TCTGTCTTGATCCGCTTCAGCTCCGGCTGCTCCGGCTaGTCACCGTTGTGGCGCTTTGTGGGCAGGGAGGCC +
Preference number: 3 (lower is better)
Translates to: SVLIRFSSGCSG*SPLWRFVGREA
Trigger: GGCCTCCCTGCCCACAAAGCGCCACAACGGTGACCAGCCGGAGCAGCCGGAGCTGAAGCGGATCAAGACAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR GCA 72 bp GTGCAGACAGCCGGGGCCACTGCGGTAGGCCAGAGATaGACAGACGCGCAGTGTGACTCTGGTTTCCAGTGG +
Preference number: 3 (lower is better)
Translates to: VQTAGATAVGQR*TDAQCDSGFQW
Trigger: CCACTGGAAACCAGAGTCACACTGCGCGTCTGTGCATCTCTGGCCTACCGCAGTGGCCCCGGCTGTCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR GCA 72 bp TGGTGTGAGCTGGGCAAACCCCGTGACCACCTCAGATaGTCCTCCCTGCAATCGCGGTCGCAGTCTGTGGCC +
Preference number: 3 (lower is better)
Translates to: WCELGKPRDHLR*SSLQSRSQSVA
Trigger: GGCCACAGACTGCGACCGCGATTGCAGGGAGGAGCATCTGAGGTGGTCACGGGGTTTGCCCAGCTCACACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR GCA 72 bp TCGCCGTCTTCTGTCTTGATCCGCTTCAGCTCCGGCTaGTCCGGCTGGTCACCGTTGTGGCGCTTTGTGGGC +
Preference number: 3 (lower is better)
Translates to: SPSSVLIRFSSG*SGWSPLWRFVG
Trigger: GCCCACAAAGCGCCACAACGGTGACCAGCCGGAGCAGCCGGAGCTGAAGCGGATCAAGACAGAAGACGGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR CCA 72 bp TGCAAAGGACTCGCCGCGGCTGCAGTTGGTGTGAGCTaGGCAAACCCCGTGACCACCTCAGATGCTCCTCCC +
Preference number: 3 (lower is better)
Translates to: CKGLAAAAVGVS*ANPVTTSDAPP
Trigger: GGGAGGAGCATCTGAGGTGGTCACGGGGTTTGCCCAGCTCACACCAACTGCAGCCGCGGCGAGTCCTTTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR GCA 72 bp TCCTACCACAAAACAGGAAATGCCCCAGACGTGCCCTaGAGGACGTGGCTCGGACCCTGCTCCACCATGGCG +
Preference number: 3 (lower is better)
Translates to: SYHKTGNAPDVP*RTWLGPCSTMA
Trigger: CGCCATGGTGGAGCAGGGTCCGAGCCACGTCCTGCAGGGCACGTCTGGGGCATTTCCTGTTTTGTGGTAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR GCA 72 bp AGGGAGGCCGATGCGGATGCGTGTGTTGCCAACATGTaGAAAGGACTCGCCGCGGCTGCAGTTGGTGTGAGC +
Preference number: 3 (lower is better)
Translates to: READADACVANM*KGLAAAAVGVS
Trigger: GCTCACACCAACTGCAGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACACGCATCCGCATCGGCCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR GCA 72 bp CTTTGTGGGCAGGGAGGCCGATGCGGATGCGTGTGTTaGCAACATGTGCAAAGGACTCGCCGCGGCTGCAGT +
Preference number: 3 (lower is better)
Translates to: LCGQGGRCGCVC*QHVQRTRRGCS
Trigger: ACTGCAGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACACGCATCCGCATCGGCCTCCCTGCCCACAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR GCA 72 bp GTTGTGGCGCTTTGTGGGCAGGGAGGCCGATGCGGATaGGTGTGTTGCCAACATGTGCAAAGGACTCGCCGC +
Preference number: 3 (lower is better)
Translates to: VVALCGQGGRCG*VCCQHVQRTRR
Trigger: GCGGCGAGTCCTTTGCACATGTTGGCAACACACGCATCCGCATCGGCCTCCCTGCCCACAAAGCGCCACAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR TCA 72 bp AACACAGTGGAGAGCGGGAGTTCACAGCGACGCAGCTaGGGACGACGCAGGACCTCTCCCAAAGGTGCTGCA +
Preference number: 3 (lower is better)
Translates to: NTVESGSSQRRS*GRRRTSPKGAA
Trigger: TGCAGCACCTTTGGGAGAGGTCCTGCGTCGTCCTCAGCTGCGTCGCTGTGAACTCCCGCTCTCCACTGTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR GCA 72 bp CACCGAGGGGCTCTGATCCATCCACACGCTGCGCTTTaGTGCGGTCACACACACGGTCTCAGTCACGTGATG +
Preference number: 3 (lower is better)
Translates to: HRGALIHPHAAL*CGHTHGLSHVM
Trigger: CATCACGTGACTGAGACCGTGTGTGTGACCGCAGCAAAGCGCAGCGTGTGGATGGATCAGAGCCCCTCGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR GCA 72 bp ACAGCTGCACCGAGGGGCTCTGATCCATCCACACGCTaGGCTTTGCTGCGGTCACACACACGGTCTCAGTCA +
Preference number: 3 (lower is better)
Translates to: TAAPRGSDPSTR*ALLRSHTRSQS
Trigger: TGACTGAGACCGTGTGTGTGACCGCAGCAAAGCGCAGCGTGTGGATGGATCAGAGCCCCTCGGTGCAGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR GCA 72 bp CGGTCGCTAGTTCTGGACACCCTTTTCCCTTACGGCTaGCGGTGGCGTGTCCACGCTCAGGGCAATGACGAT +
Preference number: 3 (lower is better)
Translates to: RSLVLDTLFPYG*RWRVHAQGNDD
Trigger: ATCGTCATTGCCCTGAGCGTGGACACGCCACCGGCAGCCGTAAGGGAAAAGGGTGTCCAGAACTAGCGACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR TCA 72 bp CAGTCATTTCATACCTTTCAATGGGCGTCACCGCAGTaGCGCTGCCCCAGCCCCATGCTGAGGGCCGACACA +
Preference number: 3 (lower is better)
Translates to: QSFHTFQWASPQ*RCPSPMLRADT
Trigger: TGTGTCGGCCCTCAGCATGGGGCTGGGGCAGCGTCACTGCGGTGACGCCCATTGAAAGGTATGAAATGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR TCA 72 bp TGCTTGGAAGATGCAGACAGCTGCACCGAGGGGCTCTaGTCCATCCACACGCTGCGCTTTGCTGCGGTCACA +
Preference number: 3 (lower is better)
Translates to: CLEDADSCTEGL*SIHTLRFAAVT
Trigger: TGTGACCGCAGCAAAGCGCAGCGTGTGGATGGATCAGAGCCCCTCGGTGCAGCTGTCTGCATCTTCCAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR TCA 72 bp GAGGAGGAGCAACCGAGGATCATGCCGCACACACTCTaGGTGCACCACGTGACGTGGGTCATACGGGAGTTC +
Preference number: 3 (lower is better)
Translates to: EEEQPRIMPHTL*VHHVTWVIREF
Trigger: GAACTCCCGTATGACCCACGTCACGTGGTGCACTCAGAGTGTGTGCGGCATGATCCTCGGTTGCTCCTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR TCA 72 bp ATCTCTTTTCAGGCAGGTCCTCCCACGGGAATCCCATaGCGGCCGACTCCACGACCACTTCCCCAGCATGAC +
Preference number: 3 (lower is better)
Translates to: ISFQAGPPTGIP*RPTPRPLPQHD
Trigger: GTCATGCTGGGGAAGTGGTCGTGGAGTCGGCCGTCATGGGATTCCCGTGGGAGGACCTGCCTGAAAAGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575578.1
3UTR GCA 72 bp CGAGGGGCTCTGATCCATCCACACGCTGCGCTTTGCTaGGGTCACACACACGGTCTCAGTCACGTGATGGTT +
Preference number: 3 (lower is better)
Translates to: RGALIHPHAALC*GHTHGLSHVMV
Trigger: AACCATCACGTGACTGAGACCGTGTGTGTGACCGCAGCAAAGCGCAGCGTGTGGATGGATCAGAGCCCCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR GCA 72 bp GTCACCGTTGTGGCGCTTTGTGGGCAGGGAGGCCGATaGGGATGCGTGTGTTGCCAACATGTGCAAAGGACT +
Preference number: 3 (lower is better)
Translates to: VTVVALCGQGGR*GCVCCQHVQRT
Trigger: AGTCCTTTGCACATGTTGGCAACACACGCATCCGCATCGGCCTCCCTGCCCACAAAGCGCCACAACGGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR CCA 72 bp TCAGATGCTCCTCCCTGCAATCGCGGTCGCAGTCTGTaGCCGCAGGTGTGGCCTCAACCGACTCTAATGTGT +
Preference number: 3 (lower is better)
Translates to: SDAPPCNRGRSL*PQVWPQPTLMC
Trigger: ACACATTAGAGTCGGTTGAGGCCACACCTGCGGCCACAGACTGCGACCGCGATTGCAGGGAGGAGCATCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR GCA 72 bp GACACCTCAAAATACTCTAATTCCACATGTCTCCGCTaGCTGGTGGGTCCTGTGAGGGCGGCGGGGATGGCT +
Preference number: 3 (lower is better)
Translates to: DTSKYSNSTCLR*LVGPVRAAGMA
Trigger: AGCCATCCCCGCCGCCCTCACAGGACCCACCAGGCAGCGGAGACATGTGGAATTAGAGTATTTTGAGGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
3UTR GCA 72 bp AAAGGTCAGGGACATTTCCTACCACAAAACAGGAAATaGCCCAGACGTGCCCTGCAGGACGTGGCTCGGACC +
Preference number: 3 (lower is better)
Translates to: KGQGHFLPQNRK*PRRALQDVART
Trigger: GGTCCGAGCCACGTCCTGCAGGGCACGTCTGGGGCATTTCCTGTTTTGTGGTAGGAAATGTCCCTGACCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR GCA 72 bp TTCTCATCCCAGGTTCCGGGCTGCCGGAAAAGGCTTTaGTCTTGTCTCCAGAAGCACCTGCTGGTCTGTCTG +
Preference number: 3 (lower is better)
Translates to: FSSQVPGCRKRL*SCLQKHLLVCL
Trigger: CAGACAGACCAGCAGGTGCTTCTGGAGACAAGAGCAAAGCCTTTTCCGGCAGCCCGGAACCTGGGATGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR GCA 72 bp CCTTCCACCTGTCGTTTCTCATCCCAGGTTCCGGGCTaGCGGAAAAGGCTTTGCTCTTGTCTCCAGAAGCAC +
Preference number: 3 (lower is better)
Translates to: PSTCRFSSQVPG*RKRLCSCLQKH
Trigger: GTGCTTCTGGAGACAAGAGCAAAGCCTTTTCCGGCAGCCCGGAACCTGGGATGAGAAACGACAGGTGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR-3UTR CAA 90 bp GATGCGGATGCGTGTGTTGCCAACATGTGCAAAGGACTCGCCGCGGCTGCAGTTGAAAAGGCTTTGCTCTaGTCTCCAGAAGCACCTGCT +
Preference number: 3 (lower is better)
Translates to: DADACVANMCKGLAAAAVEKALL*SPEAPA
Trigger: AGCAGGTGCTTCTGGAGACAAGAGCAAAGCCTTTTC...AACTGCAGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACACGCATCCGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR CCA 72 bp AGATGCACAGACGCGCAGTGTGACTCTGGTTTCCAGTaGCCTTTCTCCTACGCTGACTCGGAACAGCATCCA +
Preference number: 3 (lower is better)
Translates to: RCTDAQCDSGFQ*PFSYADSEQHP
Trigger: TGGATGCTGTTCCGAGTCAGCGTAGGAGAAAGGCCACTGGAAACCAGAGTCACACTGCGCGTCTGTGCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR-3UTR CAA 90 bp TGGGTTCTCAAGGTTCCATGCGGCCACAGCGTCCGTCCACCTGTCCACGCGAGCCCAAATCAGGTTTTGTaGTGTGTGGGTTTTGTTCAA +
Preference number: 3 (lower is better)
Translates to: WVLKVPCGHSVRPPVHASPNQVL*CVGFVQ
Trigger: TTGAACAAAACCCACACACAACAAAACCTGATTTGG...GCTCGCGTGGACAGGTGGACGGACGCTGTGGCCGCATGGAACCTTGAGAACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
3UTR-3UTR CAA 90 bp ACCGCGTACTCTACTAAAGTGAGAGGAGGAGCAACCGAGGATCATGCCGCACACGGACATACGATGCATTaGCTTGGTGTCCCAGCCAAG +
Preference number: 3 (lower is better)
Translates to: TAYSTKVRGGATEDHAAHGHTMH*LGVPAK
Trigger: CTTGGCTGGGACACCAAGCAAATGCATCGTATGTCC...GTGTGCGGCATGATCCTCGGTTGCTCCTCCTCTCACTTTAGTAGAGTACGCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR-3UTR CAA 90 bp GAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGGTGCTCAGTGGAATGCGGATGCGTGTGTaGCCAACATGTGCAAAGGAC +
Preference number: 3 (lower is better)
Translates to: EDRVSLVGRSSAQQVLSGMRMRV*PTCAKD
Trigger: GTCCTTTGCACATGTTGGCAACACACGCATCCGCAT...TCCACTGAGCACCTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR-3UTR CAA 90 bp CGTTGTTTCTTTGCCCCAAATGAAATCCACGGAAAGGGCCTGTGTGATTCTGAATCCGGCTGGTCACCGTaGTGGCGCTTTGTGGGCAGG +
Preference number: 3 (lower is better)
Translates to: RCFFAPNEIHGKGLCDSESGWSP*WRFVGR
Trigger: CCTGCCCACAAAGCGCCACAACGGTGACCAGCCGGA...TTCAGAATCACACAGGCCCTTTCCGTGGATTTCATTTGGGGCAAAGAAACAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR TCA 72 bp CGAGGATCATGCCGCACACACTCTGAGTGCACCACGTaGCGTGGGTCATACGGGAGTTCCCTTTTGTTTTCT +
Preference number: 3 (lower is better)
Translates to: RGSCRTHSECTT*RGSYGSSLLFS
Trigger: AGAAAACAAAAGGGAACTCCCGTATGACCCACGTCACGTGGTGCACTCAGAGTGTGTGCGGCATGATCCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR-3UTR CAA 90 bp CCACAGCGTCCGTCCACCTGTCCACGCGAGCCACATGCTGAAATGGAGGTGGATTCAGAGTGGAAAATTTaGCCAGGGACAAAGTCAACA +
Preference number: 3 (lower is better)
Translates to: PQRPSTCPREPHAEMEVDSEWKI*PGTKST
Trigger: TGTTGACTTTGTCCCTGGCAAAATTTTCCACTCTGA...ATCCACCTCCATTTCAGCATGTGGCTCGCGTGGACAGGTGGACGGACGCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
3UTR TCA 72 bp CCCATGACGGCCGACTCCACGACCACTTCCCCAGCATaGCTAGATTTCCTGCAGCTTCGAAATGCAAACATT +
Preference number: 3 (lower is better)
Translates to: PMTADSTTTSPA*LDFLQLRNANI
Trigger: AATGTTTGCATTTCGAAGCTGCAGGAAATCTAGTCATGCTGGGGAAGTGGTCGTGGAGTCGGCCGTCATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575578.1
3UTR-3UTR CAA 90 bp TGGTCCTCGCGGGAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGAACTACGTTGTTTCTTaGCCCCAAATGAAATCCACG +
Preference number: 3 (lower is better)
Translates to: WSSREDRVSLVGRSSAQQNYVVS*PQMKST
Trigger: CGTGGATTTCATTTGGGGCAAAGAAACAACGTAGTT...CTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTCCCGCGAGGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
3UTR-3UTR CAA 90 bp AAAGCTCTCCCGGTCGCTAGTTCTGGACACCCTTTTCCCTTACGGCTGCCGGTGTTTGGCACCACAGAGTaGATATCGTTAAAGAAAAGC +
Preference number: 3 (lower is better)
Translates to: KALPVASSGHPFPLRLPVFGTTE*ISLKKS
Trigger: GCTTTTCTTTAACGATATCAACTCTGTGGTGCCAAA...CACCGGCAGCCGTAAGGGAAAAGGGTGTCCAGAACTAGCGACCGGGAGAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR-3UTR CAA 90 bp GCAACCGAGGATCATGCCGCACACACTCTGAGTGCACCACGTGACGTGGGTCATCCAAATCAGGTTTTGTaGTGTGTGGGTTTTGTTCAA +
Preference number: 3 (lower is better)
Translates to: ATEDHAAHTLSAPRDVGHPNQVL*CVGFVQ
Trigger: TTGAACAAAACCCACACACAACAAAACCTGATTTGG...ATGACCCACGTCACGTGGTGCACTCAGAGTGTGTGCGGCATGATCCTCGGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR-3UTR CAA 90 bp TCATTCCCTCACCCCCGTCCTGTCCTCATTTTCCGTAGAGGAGTCAGCCTCAGGTCAGAGTGGAAAATTTaGCCAGGGACAAAGTCAACA +
Preference number: 3 (lower is better)
Translates to: SFPHPRPVLIFRRGVSLRSEWKI*PGTKST
Trigger: TGTTGACTTTGTCCCTGGCAAAATTTTCCACTCTGA...CCTGAGGCTGACTCCTCTACGGAAAATGAGGACAGGACGGGGGTGAGGGAATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR CCA 72 bp TGTGCACCTTCCATCTGTGAGAGGCACACTTCAGTCTaGGTTCAAGATGCAGAATGGTGCCTACGGCAAAAA +
Preference number: 3 (lower is better)
Translates to: CAPSICERHTSV*VQDAEWCLRQK
Trigger: TTTTTGCCGTAGGCACCATTCTGCATCTTGAACCCAGACTGAAGTGTGCCTCTCACAGATGGAAGGTGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR GCA 72 bp TATACATTCCAAGGTATCTGTAAAGTGCTTGGAAGATaGAGACAGCTGCACCGAGGGGCTCTGATCCATCCA +
Preference number: 3 (lower is better)
Translates to: YTFQGICKVLGR*RQLHRGALIHP
Trigger: TGGATGGATCAGAGCCCCTCGGTGCAGCTGTCTGCATCTTCCAAGCACTTTACAGATACCTTGGAATGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR-3UTR CAA 90 bp TGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGAGTTGATATCGTTAAAGAAACTCCCAAATCAGGTTTaGTTGTGTGTGGGTTTTGTT +
Preference number: 3 (lower is better)
Translates to: WREAASPFGTTELISLKKLPNQV*LCVGFV
Trigger: AACAAAACCCACACACAACAAAACCTGATTTGGGAG...TTTCTTTAACGATATCAACTCTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
3UTR-3UTR CAA 90 bp AAAACGTCTCCAAGGGGACATACGATGCATTTGCTTGGTGTCCCAGCCAAGCTCAACTACGTTGTTTCTTaGCCCCAAATGAAATCCACG +
Preference number: 3 (lower is better)
Translates to: KTSPRGHTMHLLGVPAKLNYVVS*PQMKST
Trigger: CGTGGATTTCATTTGGGGCAAAGAAACAACGTAGTT...GAGCTTGGCTGGGACACCAAGCAAATGCATCGTATGTCCCCTTGGAGACGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR-3UTR CAA 90 bp AGCTTACACGGGAAAGTCTACCCCCGACTCCTTCTGGATAGTAACATACACAGCTTTGGCACCACAGAGTaGATATCGTTAAAGAAAAGC +
Preference number: 3 (lower is better)
Translates to: SLHGKVYPRLLLDSNIHSFGTTE*ISLKKS
Trigger: GCTTTTCTTTAACGATATCAACTCTGTGGTGCCAAA...GCTGTGTATGTTACTATCCAGAAGGAGTCGGGGGTAGACTTTCCCGTGTAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR TCA 72 bp CTTCTTTACCATTTGAATGGACATTTTCCTTACCTGTaGTCCCAACAGAAACAGATCCAGACCTATCATGTG +
Preference number: 3 (lower is better)
Translates to: LLYHLNGHFPYL*SQQKQIQTYHV
Trigger: CACATGATAGGTCTGGATCTGTTTCTGTTGGGATCACAGGTAAGGAAAATGTCCATTCAAATGGTAAAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CCA 90 bp CAGGCTGACGCCCTCTCCCCATGTGCACGGCCCTCGGCCCTCGGCCGGCACACTTGCACCCCCGAGTGCTaGCGGGAGGCCGCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: QADALSPCARPSALGRHTCTPEC*REAASP
Trigger: AGGAGACGCGGCCTCCCGCCAGCACTCGGGGGTGCA...AGTGTGCCGGCCGAGGGCCGAGGGCCGTGCACATGGGGAGAGGGCGTCAGCCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR TCA 90 bp CAGGCTGACGCCCTCTCCCCATGTGCACGGCCCTCGGCCCTCGGCCGGCACACTGGTGGCGCCGGGAGATaGAGCTCGAGTGGCCCATGC +
Preference number: 4 (lower is better)
Translates to: QADALSPCARPSALGRHTGGAGR*SSSGPC
Trigger: GCATGGGCCACTCGAGCTTCATCTCCCGGCGCCACC...AGTGTGCCGGCCGAGGGCCGAGGGCCGTGCACATGGGGAGAGGGCGTCAGCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR GCA 90 bp CAGGCTGACGCCCTCTCCCCATGTGCACGGCCCTCGGCCCTCGGCCGGCACACTACGTGGCTCGGACCCTaGTCCACCATGGCGGCCGCT +
Preference number: 4 (lower is better)
Translates to: QADALSPCARPSALGRHTTWLGP*STMAAA
Trigger: AGCGGCCGCCATGGTGGAGCAGGGTCCGAGCCACGT...AGTGTGCCGGCCGAGGGCCGAGGGCCGTGCACATGGGGAGAGGGCGTCAGCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR GCA 90 bp CCCTCGGCCCTCGGCCGGCACACTCGGGAAGGGCCAGCGGTTTTCTTCCTGAGGGCCCCAGACGTGCCCTaGAGGACGTGGCTCGGACCC +
Preference number: 4 (lower is better)
Translates to: PSALGRHTREGPAVFFLRAPDVP*RTWLGP
Trigger: GGGTCCGAGCCACGTCCTGCAGGGCACGTCTGGGGC...CCTCAGGAAGAAAACCGCTGGCCCTTCCCGAGTGTGCCGGCCGAGGGCCGAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR GCA 90 bp GCTGACGCCCTCTCCCCATGTGCACGGCCCTCGGCCCTCGGCCGGCACACTCGGGAAATGCCCCAGACGTaGCCTGCAGGACGTGGCTCG +
Preference number: 4 (lower is better)
Translates to: ADALSPCARPSALGRHTREMPQT*PAGRGS
Trigger: CGAGCCACGTCCTGCAGGGCACGTCTGGGGCATTTC...CCGAGTGTGCCGGCCGAGGGCCGAGGGCCGTGCACATGGGGAGAGGGCGTCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR TCA 90 bp GGCCCTGCACCCCCGAGTGCTGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGGACAGCACTCCCGCGTaGTTGGGAGAGGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: GPAPPSAGGRPRLLLAPQDSTPA*LGEAGA
Trigger: TGCCCCAGCCTCTCCCAATCACGCGGGAGTGCTGTC...CTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCAGCACTCGGGGGTGCAGGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR GCA 90 bp GCTGACGCCCTCTCCCCATGTGCACGGCCCTCGGCCCTCGGCCGGCACACTCGGATTCTCCTGGGCCTCTaGCTTAGGAGGGGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: ADALSPCARPSALGRHTRILLGL*LRRGQH
Trigger: GTGCTGGCCCCTCCTAAGGCAGAGGCCCAGGAGAAT...CCGAGTGTGCCGGCCGAGGGCCGAGGGCCGTGCACATGGGGAGAGGGCGTCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR TCA 90 bp AGTTCTGGACACCCTTTTCCCTTACGGCTGCCGGTGGCGTGTCCACGCTCAGGGCGCCGCCCGGGGGCGTaGAGATCTCGAGGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: SSGHPFPLRLPVACPRSGRRPGA*RSRGGA
Trigger: GGCGCCACCTCGAGATCTTCACGCCCCCGGGCGGCG...CCCTGAGCGTGGACACGCCACCGGCAGCCGTAAGGGAAAAGGGTGTCCAGAACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR TCA 90 bp CCCTCGGCCCTCGGCCGGCACACTCGGGAAGGGCCAGCGGTTTTCTTCCTGAGGTGGGCGCCACTAGAGTaGGCAGACAGCACTCCCGCG +
Preference number: 4 (lower is better)
Translates to: PSALGRHTREGPAVFFLRWAPLE*ADSTPA
Trigger: CGCGGGAGTGCTGTCTGCTCACTCTAGTGGCGCCCA...CCTCAGGAAGAAAACCGCTGGCCCTTCCCGAGTGTGCCGGCCGAGGGCCGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR TCA 90 bp CAGGCTGACGCCCTCTCCCCATGTGCACGGCCCTCGGCCCTCGGCCGGCACACTCTCTGTGGAGGGAGCTaGCCCCACACACAGGACAGA +
Preference number: 4 (lower is better)
Translates to: QADALSPCARPSALGRHTLCGGS*PHTQDR
Trigger: TCTGTCCTGTGTGTGGGGTCAGCTCCCTCCACAGAG...AGTGTGCCGGCCGAGGGCCGAGGGCCGTGCACATGGGGAGAGGGCGTCAGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR TCA 90 bp GGCCCTGCACCCCCGAGTGCTGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGTTGTGCTCGGGAACCTaGATGTGCACACGCGCGGCA +
Preference number: 4 (lower is better)
Translates to: GPAPPSAGGRPRLLLAPQLCSGT*MCTRAA
Trigger: TGCCGCGCGTGTGCACATTCAGGTTCCCGAGCACAA...CTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCAGCACTCGGGGGTGCAGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR TCA 90 bp GGCCCTGCACCCCCGAGTGCTGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGTCTGTGCCGTCTGAATaGTCCGGCTGGCAGTGCCGA +
Preference number: 4 (lower is better)
Translates to: GPAPPSAGGRPRLLLAPQSVPSE*SGWQCR
Trigger: TCGGCACTGCCAGCCGGATCATTCAGACGGCACAGA...CTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCAGCACTCGGGGGTGCAGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR TCA 90 bp CCCTCGGCCCTCGGCCGGCACACTCGGGAAGGGCCAGCGGTTTTCTTCCTGAGGCAGCGGTTTTCTTCCTaGGGAGCCGGGCGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: PSALGRHTREGPAVFFLRQRFSS*GAGRGG
Trigger: ACCTCCTCGCCCGGCTCCTCAGGAAGAAAACCGCTG...CCTCAGGAAGAAAACCGCTGGCCCTTCCCGAGTGTGCCGGCCGAGGGCCGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR GCA 90 bp GGCCCTGCACCCCCGAGTGCTGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGATTCTCCTGGGCCTCTaGCTTAGGAGGGGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: GPAPPSAGGRPRLLLAPQILLGL*LRRGQH
Trigger: GTGCTGGCCCCTCCTAAGGCAGAGGCCCAGGAGAAT...CTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCAGCACTCGGGGGTGCAGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CCA 90 bp GCTGACGCCCTCTCCCCATGTGCACGGCCCTCGGCCCTCGGCCGGCACACTCGGAGAGGGCTGATGAGGTaGGCCATGGTGTCTGGAATG +
Preference number: 4 (lower is better)
Translates to: ADALSPCARPSALGRHTRRGLMR*AMVSGM
Trigger: CATTCCAGACACCATGGCCCACCTCATCAGCCCTCT...CCGAGTGTGCCGGCCGAGGGCCGAGGGCCGTGCACATGGGGAGAGGGCGTCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CCA 90 bp CCCTCGGCCCTCGGCCGGCACACTCGGGAAGGGCCAGCGGTTTTCTTCCTGAGGTGCACGACGGGTGGCTaGGAGGTCGAGGTGGTCACT +
Preference number: 4 (lower is better)
Translates to: PSALGRHTREGPAVFFLRCTTGG*EVEVVT
Trigger: AGTGACCACCTCGACCTCCCAGCCACCCGTCGTGCA...CCTCAGGAAGAAAACCGCTGGCCCTTCCCGAGTGTGCCGGCCGAGGGCCGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CCA 90 bp GGCCCTGCACCCCCGAGTGCTGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGAGTGTACGTGTTCGCTaGGGCCAGTCCGGCCACACT +
Preference number: 4 (lower is better)
Translates to: GPAPPSAGGRPRLLLAPQSVRVR*GQSGHT
Trigger: AGTGTGGCCGGACTGGCCCCAGCGAACACGTACACT...CTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCAGCACTCGGGGGTGCAGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
3UTR CAA 72 bp GCTCCGGCTGCTCCGGCTGGTCACCGTTGTGGCGCTTaGTGGGCAGGGAGGCCGATGCGGATGCGTGTGTTG +
Preference number: 4 (lower is better)
Translates to: APAAPAGHRCGA*WAGRPMRMRVL
Trigger: CAACACACGCATCCGCATCGGCCTCCCTGCCCACAAAGCGCCACAACGGTGACCAGCCGGAGCAGCCGGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR TCA 90 bp ACAGCAGGCGCTGGCCGTGCCGTCCTCACACAGCGATGCCTGGTCCTCGCGGGACGCCGTCTTCTGTCTTaGTCCGCTTCAGCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: TAGAGRAVLTQRCLVLAGRRLLS*SASAPA
Trigger: AGCCGGAGCTGAAGCGGATCAAGACAGAAGACGGCG...TCCCGCGAGGACCAGGCATCGCTGTGTGAGGACGGCACGGCCAGCGCCTGCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR TCA 90 bp GGCCCTGCACCCCCGAGTGCTGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGTTAAGTGCAGCTCGGTaGGTCCCGGCAGTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: GPAPPSAGGRPRLLLAPQLSAAR*VPAVPS
Trigger: GGAAGGAACTGCCGGGACTCACCGAGCTGCACTTAA...CTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCAGCACTCGGGGGTGCAGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR TCA 90 bp GCTGACGCCCTCTCCCCATGTGCACGGCCCTCGGCCCTCGGCCGGCACACTCGGAAGTGGGTAGACGACTaGAGGAGATCAGCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: ADALSPCARPSALGRHTRKWVDD*RRSAVH
Trigger: GTGGACAGCTGATCTCCTTCAGTCGTCTACCCACTT...CCGAGTGTGCCGGCCGAGGGCCGAGGGCCGTGCACATGGGGAGAGGGCGTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR TCA 90 bp GGCCCTGCACCCCCGAGTGCTGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGGCCTGCTGTGTCAACTaGGGCAACTCCAGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: GPAPPSAGGRPRLLLAPQACCVN*GNSSLS
Trigger: GCTCAGACTGGAGTTGCCTCAGTTGACACAGCAGGC...CTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCAGCACTCGGGGGTGCAGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR TCA 90 bp GGCCCTGCACCCCCGAGTGCTGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGGCCTTTCTCCTACGCTaGCTCGGAACAGCATCCACG +
Preference number: 4 (lower is better)
Translates to: GPAPPSAGGRPRLLLAPQAFLLR*LGTAST
Trigger: CGTGGATGCTGTTCCGAGTCAGCGTAGGAGAAAGGC...CTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCAGCACTCGGGGGTGCAGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR TCA 90 bp AGGCAGGTCCTCCCACGGGAATCCCATGACGGCCGACTCCACGACCACTTCCCCCCCACGGGAATCCCATaGCGGCCGACTCCACGACCA +
Preference number: 4 (lower is better)
Translates to: RQVLPRESHDGRLHDHFPPTGIP*RPTPRP
Trigger: TGGTCGTGGAGTCGGCCGTCATGGGATTCCCGTGGG...GGGGAAGTGGTCGTGGAGTCGGCCGTCATGGGATTCCCGTGGGAGGACCTGCCT
67% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000575578.1
CDS-3UTR GCA 90 bp AGTTCTGGACACCCTTTTCCCTTACGGCTGCCGGTGGCGTGTCCACGCTCAGGGCCAACCACAGGGCCCTaGACCCCCGAGTGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: SSGHPFPLRLPVACPRSGPTTGP*TPECWR
Trigger: CCGCCAGCACTCGGGGGTGCAGGGCCCTGTGGTTGG...CCCTGAGCGTGGACACGCCACCGGCAGCCGTAAGGGAAAAGGGTGTCCAGAACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR GCA 90 bp ACAGCAGGCGCTGGCCGTGCCGTCCTCACACAGCGATGCCTGGTCCTCGCGGGATCCACATGTCTCCGCTaGCTGGTGGGTCCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: TAGAGRAVLTQRCLVLAGSTCLR*LVGPVR
Trigger: CCTCACAGGACCCACCAGGCAGCGGAGACATGTGGA...TCCCGCGAGGACCAGGCATCGCTGTGTGAGGACGGCACGGCCAGCGCCTGCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR GCA 90 bp GGCCCTGCACCCCCGAGTGCTGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGTCCCAGGTTCCGGGCTaGCGGAAAAGGCTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: GPAPPSAGGRPRLLLAPQSQVPG*RKRLCS
Trigger: AGAGCAAAGCCTTTTCCGGCAGCCCGGAACCTGGGA...CTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCAGCACTCGGGGGTGCAGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR CCA 90 bp GTGCACGGCCCTCGGCCCTCGGCCGGCACACTCGGGAAGGGCCAGCGGTTTTCTGCAAACCGGGCTTCCTaGATGACAGCGAGTTTGGGC +
Preference number: 4 (lower is better)
Translates to: VHGPRPSAGTLGKGQRFSANRAS*MTASLG
Trigger: GCCCAAACTCGCTGTCATCCAGGAAGCCCGGTTTGC...AGAAAACCGCTGGCCCTTCCCGAGTGTGCCGGCCGAGGGCCGAGGGCCGTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CCA 90 bp ACAGCAGGCGCTGGCCGTGCCGTCCTCACACAGCGATGCCTGGTCCTCGCGGGAGGTCGAGGTGGTCACTaGGGTGGCCACAGTGTAGGT +
Preference number: 4 (lower is better)
Translates to: TAGAGRAVLTQRCLVLAGGRGGH*GGHSVG
Trigger: ACCTACACTGTGGCCACCCCAGTGACCACCTCGACC...TCCCGCGAGGACCAGGCATCGCTGTGTGAGGACGGCACGGCCAGCGCCTGCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CCA 90 bp GGCCCTGCACCCCCGAGTGCTGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGGCTGGTCTGTCTGGATaGGGCCTGCTGTGTCAACTG +
Preference number: 4 (lower is better)
Translates to: GPAPPSAGGRPRLLLAPQAGLSG*GLLCQL
Trigger: CAGTTGACACAGCAGGCCCCATCCAGACAGACCAGC...CTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCAGCACTCGGGGGTGCAGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR CAA 72 bp ATCCGCTTCAGCTCCGGCTGCTCCGGCTGGTCACCGTaGTGGCGCTTTGTGGGCAGGGAGGCCGATGCGGAT +
Preference number: 4 (lower is better)
Translates to: IRFSSGCSGWSP*WRFVGREADAD
Trigger: ATCCGCATCGGCCTCCCTGCCCACAAAGCGCCACAACGGTGACCAGCCGGAGCAGCCGGAGCTGAAGCGGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR TCA 90 bp CCACAGCGTCCGTCCACCTGTCCACGCGAGCCACATGCTGAAATGGAGGTGGATGCCCACCTTGTACCCTaGAGACCCCGCTCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: PQRPSTCPREPHAEMEVDAHLVP*RPRSPG
Trigger: CCCCGGGGAGCGGGGTCTTCAGGGTACAAGGTGGGC...ATCCACCTCCATTTCAGCATGTGGCTCGCGTGGACAGGTGGACGGACGCTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR TCA 90 bp TGGGTTCTCAAGGTTCCATGCGGCCACAGCGTCCGTCCACCTGTCCACGCGAGCGCACGGCTGCCGGGGTaGCCACAGCTTGTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: WVLKVPCGHSVRPPVHASARLPG*PQLVQR
Trigger: TCTCTGGACAAGCTGTGGTCACCCCGGCAGCCGTGC...GCTCGCGTGGACAGGTGGACGGACGCTGTGGCCGCATGGAACCTTGAGAACCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR TCA 90 bp ACAGCAGGCGCTGGCCGTGCCGTCCTCACACAGCGATGCCTGGTCCTCGCGGGATCTGAGTGCACCACGTaGCGTGGGTCATACGGGAGT +
Preference number: 4 (lower is better)
Translates to: TAGAGRAVLTQRCLVLAGSECTT*RGSYGS
Trigger: ACTCCCGTATGACCCACGTCACGTGGTGCACTCAGA...TCCCGCGAGGACCAGGCATCGCTGTGTGAGGACGGCACGGCCAGCGCCTGCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR TCA 90 bp GCTGCCGGTGGCGTGTCCACGCTCAGGGCAATGACGATGCCCTCGCCGTCTTCTGAGGCAACTCCAGTCTaGGCTGGCACATGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: AAGGVSTLRAMTMPSPSSEATPV*AGTWGP
Trigger: AGGCCCCCATGTGCCAGCTCAGACTGGAGTTGCCTC...AGAAGACGGCGAGGGCATCGTCATTGCCCTGAGCGTGGACACGCCACCGGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR TCA 90 bp TCCGGCTGGTCACCGTTGTGGCGCTTTGTGGGCAGGGAGGCCGATGCGGATGCGCACAGACGCGCAGTGTaGCTCTGGTTTCCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: SGWSPLWRFVGREADADAHRRAV*LWFPVA
Trigger: GGCCACTGGAAACCAGAGTCACACTGCGCGTCTGTG...CGCATCCGCATCGGCCTCCCTGCCCACAAAGCGCCACAACGGTGACCAGCCGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR GCA 90 bp GTGCACGGCCCTCGGCCCTCGGCCGGCACACTCGGGAAGGGCCAGCGGTTTTCTATGGCCTGTGGTAGCTaGCGCTGGACGGTGATTAAG +
Preference number: 4 (lower is better)
Translates to: VHGPRPSAGTLGKGQRFSMACGS*RWTVIK
Trigger: CTTAATCACCGTCCAGCGGCAGCTACCACAGGCCAT...AGAAAACCGCTGGCCCTTCCCGAGTGTGCCGGCCGAGGGCCGAGGGCCGTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR GCA 90 bp TGGTCCTCGCGGGAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGCCCTGCACCCCCGAGTaGTGGCGGGAGGCCGCGTCT +
Preference number: 4 (lower is better)
Translates to: WSSREDRVSLVGRSSAQQPCTPE*WREAAS
Trigger: AGACGCGGCCTCCCGCCAGCACTCGGGGGTGCAGGG...CTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTCCCGCGAGGACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR GCA 90 bp GGCCCTGCACCCCCGAGTGCTGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGCCACAAAACAGGAAATaGCCCAGACGTGCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: GPAPPSAGGRPRLLLAPQPQNRK*PRRALQ
Trigger: CTGCAGGGCACGTCTGGGGCATTTCCTGTTTTGTGG...CTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCAGCACTCGGGGGTGCAGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CCA 90 bp ACAGCAGGCGCTGGCCGTGCCGTCCTCACACAGCGATGCCTGGTCCTCGCGGGAACGAGTTGCGGCCGATaGTCACCGAGCGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: TAGAGRAVLTQRCLVLAGTSCGR*SPSASS
Trigger: TGAAGAAGCGCTCGGTGACCATCGGCCGCAACTCGT...TCCCGCGAGGACCAGGCATCGCTGTGTGAGGACGGCACGGCCAGCGCCTGCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CCA 90 bp AGTTCTGGACACCCTTTTCCCTTACGGCTGCCGGTGGCGTGTCCACGCTCAGGGGACCCTGGGGCGCTCTaGGCAAACCGGGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: SSGHPFPLRLPVACPRSGDPGAL*ANRASW
Trigger: CCAGGAAGCCCGGTTTGCCCAGAGCGCCCCAGGGTC...CCCTGAGCGTGGACACGCCACCGGCAGCCGTAAGGGAAAAGGGTGTCCAGAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR CCA 90 bp TGGGTTCTCAAGGTTCCATGCGGCCACAGCGTCCGTCCACCTGTCCACGCGAGCTGGCAGTGCCGAGCGTaGCGTGGCCAATGGCGGGAA +
Preference number: 4 (lower is better)
Translates to: WVLKVPCGHSVRPPVHASWQCRA*RGQWRE
Trigger: TTCCCGCCATTGGCCACGCCACGCTCGGCACTGCCA...GCTCGCGTGGACAGGTGGACGGACGCTGTGGCCGCATGGAACCTTGAGAACCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR TCA 90 bp AGGACAATGACGGAAGTGGGTAGACGACTGAAGGAGATCAGCTGTCCACCGCGTCGCCGCCCGGGGGCGTaGAGATCTCGAGGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: RTMTEVGRRLKEISCPPRRRPGA*RSRGGA
Trigger: GGCGCCACCTCGAGATCTTCACGCCCCCGGGCGGCG...ACGCGGTGGACAGCTGATCTCCTTCAGTCGTCTACCCACTTCCGTCATTGTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR TCA 90 bp CGAGTGCTGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGAGTTGATATCGTTGCCCACCTTGTACCCTaGAGACCCCGCTCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: RVLAGGRVSFWHHRVDIVAHLVP*RPRSPG
Trigger: CCCCGGGGAGCGGGGTCTTCAGGGTACAAGGTGGGC...AACGATATCAACTCTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCAGCACTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR TCA 90 bp CTCCTCCCTGCAATCGCGGTCGCAGTCTGTGGCCGCAGGTGTGGCCTCAACCGAATCTGGTGGACGACGTaGACCGTCTGCACGACGGGT +
Preference number: 4 (lower is better)
Translates to: LLPAIAVAVCGRRCGLNRIWWTT*TVCTTG
Trigger: ACCCGTCGTGCAGACGGTTCACGTCGTCCACCAGAT...TCGGTTGAGGCCACACCTGCGGCCACAGACTGCGACCGCGATTGCAGGGAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR TCA 90 bp GCAGTTCCTTCCCGGCACTGGCTCGTCCCTGGGTTCTCAAGGTTCCATGCGGCCTCACAGCGACGCAGCTaGGGACGACGCAGGACCTCT +
Preference number: 4 (lower is better)
Translates to: AVPSRHWLVPGFSRFHAASQRRS*GRRRTS
Trigger: AGAGGTCCTGCGTCGTCCTCAGCTGCGTCGCTGTGA...GGCCGCATGGAACCTTGAGAACCCAGGGACGAGCCAGTGCCGGGAAGGAACTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR GCA 90 bp CTCCTCCCTGCAATCGCGGTCGCAGTCTGTGGCCGCAGGTGTGGCCTCAACCGACGTGACCACCTCAGATaGTCCTCCCTGCAATCGCGG +
Preference number: 4 (lower is better)
Translates to: LLPAIAVAVCGRRCGLNRRDHLR*SSLQSR
Trigger: CCGCGATTGCAGGGAGGAGCATCTGAGGTGGTCACG...TCGGTTGAGGCCACACCTGCGGCCACAGACTGCGACCGCGATTGCAGGGAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR CCA 90 bp AGAGCGGGAGTTCACAGCGACGCAGCTGAGGACGACGCAGGACCTCTCCCAAAGGTGCCGAGCGTGGCGTaGCCAATGGCGGGAATAGGC +
Preference number: 4 (lower is better)
Translates to: RAGVHSDAAEDDAGPLPKVPSVA*PMAGIG
Trigger: GCCTATTCCCGCCATTGGCCACGCCACGCTCGGCAC...CTTTGGGAGAGGTCCTGCGTCGTCCTCAGCTGCGTCGCTGTGAACTCCCGCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CCA 90 bp CTTTTCAGGCAGGTCCTCCCACGGGAATCCCATGACGGCCGACTCCACGACCACTGGCAGTGCCGAGCGTaGCGTGGCCAATGGCGGGAA +
Preference number: 4 (lower is better)
Translates to: LFRQVLPRESHDGRLHDHWQCRA*RGQWRE
Trigger: TTCCCGCCATTGGCCACGCCACGCTCGGCACTGCCA...GTGGTCGTGGAGTCGGCCGTCATGGGATTCCCGTGGGAGGACCTGCCTGAAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575578.1
CDS-3UTR CCA 90 bp CTCCTCCCTGCAATCGCGGTCGCAGTCTGTGGCCGCAGGTGTGGCCTCAACCGAACTATGGTCACCGTCTaGACCGGGGTGGTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: LLPAIAVAVCGRRCGLNRTMVTV*TGVVCA
Trigger: GGCACAGACCACCCCGGTCCAGACGGTGACCATAGT...TCGGTTGAGGCCACACCTGCGGCCACAGACTGCGACCGCGATTGCAGGGAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR CCA 90 bp AGTTCTGGACACCCTTTTCCCTTACGGCTGCCGGTGGCGTGTCCACGCTCAGGGCGTTGTGGCGCTTTGTaGGCAGGGAGGCCGATGCGG +
Preference number: 4 (lower is better)
Translates to: SSGHPFPLRLPVACPRSGRCGAL*AGRPMR
Trigger: CCGCATCGGCCTCCCTGCCCACAAAGCGCCACAACG...CCCTGAGCGTGGACACGCCACCGGCAGCCGTAAGGGAAAAGGGTGTCCAGAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR CCA 90 bp TGGTCCTCGCGGGAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGTGCACCCCCGAGTGCTaGCGGGAGGCCGCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: WSSREDRVSLVGRSSAQQCTPEC*REAASP
Trigger: AGGAGACGCGGCCTCCCGCCAGCACTCGGGGGTGCA...CTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTCCCGCGAGGACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
3UTR CAA 72 bp GCTTTGTGGGCAGGGAGGCCGATGCGGATGCGTGTGTaGCCAACATGTGCAAAGGACTCGCCGCGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: ALWAGRPMRMRV*PTCAKDSPRLQ
Trigger: CTGCAGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACACGCATCCGCATCGGCCTCCCTGCCCACAAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR TCA 90 bp GATGCGGATGCGTGTGTTGCCAACATGTGCAAAGGACTCGCCGCGGCTGCAGTTGGTGGCGCCGGGAGATaGAGCTCGAGTGGCCCATGC +
Preference number: 4 (lower is better)
Translates to: DADACVANMCKGLAAAAVGGAGR*SSSGPC
Trigger: GCATGGGCCACTCGAGCTTCATCTCCCGGCGCCACC...AACTGCAGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACACGCATCCGCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR TCA 90 bp TCCGGCTGGTCACCGTTGTGGCGCTTTGTGGGCAGGGAGGCCGATGCGGATGCGGGAGTAAGGCGGCTTTaGATCATCCTTCGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: SGWSPLWRFVGREADADAGVRRL*IILRAV
Trigger: GACAGCCCGAAGGATGATTCAAAGCCGCCTTACTCC...CGCATCCGCATCGGCCTCCCTGCCCACAAAGCGCCACAACGGTGACCAGCCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR TCA 90 bp CCACAGCGTCCGTCCACCTGTCCACGCGAGCCACATGCTGAAATGGAGGTGGATTGGGCGCCACTAGAGTaGGCAGACAGCACTCCCGCG +
Preference number: 4 (lower is better)
Translates to: PQRPSTCPREPHAEMEVDWAPLE*ADSTPA
Trigger: CGCGGGAGTGCTGTCTGCTCACTCTAGTGGCGCCCA...ATCCACCTCCATTTCAGCATGTGGCTCGCGTGGACAGGTGGACGGACGCTGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR TCA 90 bp ACAGCAGGCGCTGGCCGTGCCGTCCTCACACAGCGATGCCTGGTCCTCGCGGGATGCACCTTCCATCTGTaGGAGGCACACTTCAGTCTG +
Preference number: 4 (lower is better)
Translates to: TAGAGRAVLTQRCLVLAGCTFHL*EAHFSL
Trigger: CAGACTGAAGTGTGCCTCTCACAGATGGAAGGTGCA...TCCCGCGAGGACCAGGCATCGCTGTGTGAGGACGGCACGGCCAGCGCCTGCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR TCA 90 bp TGGTCACCGTTGTGGCGCTTTGTGGGCAGGGAGGCCGATGCGGATGCGTGTGTTGCTGGGCAAACCCCGTaGCCACCTCAGATGCTCCTC +
Preference number: 4 (lower is better)
Translates to: WSPLWRFVGREADADACVAGQTP*PPQMLL
Trigger: GAGGAGCATCTGAGGTGGTCACGGGGTTTGCCCAGC...AACACACGCATCCGCATCGGCCTCCCTGCCCACAAAGCGCCACAACGGTGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR GCA 90 bp GAGTCCCGGCAGTTCCTTCCCGGCACTGGCTCGTCCCTGGGTTCTCAAGGTTCCGGAGGGGCAGGAGTTTaGAGCGCTGATGGTTCCCGT +
Preference number: 4 (lower is better)
Translates to: ESRQFLPGTGSSLGSQGSGGAGV*SADGSR
Trigger: ACGGGAACCATCAGCGCTGCAAACTCCTGCCCCTCC...GGAACCTTGAGAACCCAGGGACGAGCCAGTGCCGGGAAGGAACTGCCGGGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR GCA 90 bp TGGTCCTCGCGGGAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGAGGGGCCAGCACGGCTaGCGGGGTGACCACAGCTTG +
Preference number: 4 (lower is better)
Translates to: WSSREDRVSLVGRSSAQQRGQHG*RGDHSL
Trigger: CAAGCTGTGGTCACCCCGGCAGCCGTGCTGGCCCCT...CTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTCCCGCGAGGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR GCA 90 bp GCTGCCGGTGGCGTGTCCACGCTCAGGGCAATGACGATGCCCTCGCCGTCTTCTGTTCTCAAGGTTCCATaGGGCCACAGCGTCCGTCCA +
Preference number: 4 (lower is better)
Translates to: AAGGVSTLRAMTMPSPSSVLKVP*GHSVRP
Trigger: TGGACGGACGCTGTGGCCGCATGGAACCTTGAGAAC...AGAAGACGGCGAGGGCATCGTCATTGCCCTGAGCGTGGACACGCCACCGGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR GCA 90 bp GTGCACGGCCCTCGGCCCTCGGCCGGCACACTCGGGAAGGGCCAGCGGTTTTCTCAGCAACCCTTGCTGTaGTCAAGTTCTTGGGGATTC +
Preference number: 4 (lower is better)
Translates to: VHGPRPSAGTLGKGQRFSQQPLL*SSSWGF
Trigger: GAATCCCCAAGAACTTGAGCACAGCAAGGGTTGCTG...AGAAAACCGCTGGCCCTTCCCGAGTGTGCCGGCCGAGGGCCGAGGGCCGTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR GCA 90 bp TGGGTTCTCAAGGTTCCATGCGGCCACAGCGTCCGTCCACCTGTCCACGCGAGCGACCTCTCCCAAAGGTaGTGCAGCTCCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: WVLKVPCGHSVRPPVHASDLSQR*CSSSTR
Trigger: CCTGGTGCTGGAGCTGCAGCACCTTTGGGAGAGGTC...GCTCGCGTGGACAGGTGGACGGACGCTGTGGCCGCATGGAACCTTGAGAACCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR GCA 90 bp GCAGTTCCTTCCCGGCACTGGCTCGTCCCTGGGTTCTCAAGGTTCCATGCGGCCGCGGTAGGCCAGAGATaGACAGACGCGCAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: AVPSRHWLVPGFSRFHAAAVGQR*TDAQCD
Trigger: GTCACACTGCGCGTCTGTGCATCTCTGGCCTACCGC...GGCCGCATGGAACCTTGAGAACCCAGGGACGAGCCAGTGCCGGGAAGGAACTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR GCA 90 bp CTTCAGCTCCGGCTGCTCCGGCTGGTCACCGTTGTGGCGCTTTGTGGGCAGGGATCAGATGCTCCTCCCTaGAATCGCGGTCGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: LQLRLLRLVTVVALCGQGSDAPP*NRGRSL
Trigger: CAGACTGCGACCGCGATTGCAGGGAGGAGCATCTGA...TCCCTGCCCACAAAGCGCCACAACGGTGACCAGCCGGAGCAGCCGGAGCTGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR CCA 90 bp TGGTCACCGTTGTGGCGCTTTGTGGGCAGGGAGGCCGATGCGGATGCGTGTGTTGGTGACCGACACCGCTaGGATCTGGTGGACGACGTG +
Preference number: 4 (lower is better)
Translates to: WSPLWRFVGREADADACVGDRHR*DLVDDV
Trigger: CACGTCGTCCACCAGATCCCAGCGGTGTCGGTCACC...AACACACGCATCCGCATCGGCCTCCCTGCCCACAAAGCGCCACAACGGTGACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR CCA 90 bp GCAACCGAGGATCATGCCGCACACACTCTGAGTGCACCACGTGACGTGGGTCATCCTTACGGCTGCCGGTaGCGTGTCCACGCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: ATEDHAAHTLSAPRDVGHPYGCR*RVHAQG
Trigger: GCCCTGAGCGTGGACACGCCACCGGCAGCCGTAAGG...ATGACCCACGTCACGTGGTGCACTCAGAGTGTGTGCGGCATGATCCTCGGTTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CCA 90 bp CGAGTGCTGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGAGTTGATATCGTTCCTTACGGCTGCCGGTaGCGTGTCCACGCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: RVLAGGRVSFWHHRVDIVPYGCR*RVHAQG
Trigger: GCCCTGAGCGTGGACACGCCACCGGCAGCCGTAAGG...AACGATATCAACTCTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCAGCACTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CCA 90 bp GTGCACGGCCCTCGGCCCTCGGCCGGCACACTCGGGAAGGGCCAGCGGTTTTCTCAAGAAAACCCGGTGTaGGAGTCTGCTCATCTATGG +
Preference number: 4 (lower is better)
Translates to: VHGPRPSAGTLGKGQRFSQENPV*ESAHLW
Trigger: CCATAGATGAGCAGACTCCCACACCGGGTTTTCTTG...AGAAAACCGCTGGCCCTTCCCGAGTGTGCCGGCCGAGGGCCGAGGGCCGTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CCA 90 bp GCTGCCGGTGGCGTGTCCACGCTCAGGGCAATGACGATGCCCTCGCCGTCTTCTCTGTGGCCGCAGGTGTaGCCTCAACCGACTCTAATG +
Preference number: 4 (lower is better)
Translates to: AAGGVSTLRAMTMPSPSSLWPQV*PQPTLM
Trigger: CATTAGAGTCGGTTGAGGCCACACCTGCGGCCACAG...AGAAGACGGCGAGGGCATCGTCATTGCCCTGAGCGTGGACACGCCACCGGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR TCA 90 bp GGTGTCTCTGGACAACCTTCCACCTGTCGTTTCTCATCCCAGGTTCCGGGCTGCGTCCGGCCACACTGGTaGCCGACACCGCTGGGATCT +
Preference number: 4 (lower is better)
Translates to: GVSGQPSTCRFSSQVPGCVRPHW*PTPLGS
Trigger: AGATCCCAGCGGTGTCGGTCACCAGTGTGGCCGGAC...GCAGCCCGGAACCTGGGATGAGAAACGACAGGTGGAAGGTTGTCCAGAGACACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR TCA 90 bp GCATTTGCTTGGTGTCCCAGCCAAGCTCCCCACCGGCGACCTCACTGTTCCTTAGCACGGCTGCCGGGGTaGCCACAGCTTGTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: AFAWCPSQAPHRRPHCSLARLPG*PQLVQR
Trigger: TCTCTGGACAAGCTGTGGTCACCCCGGCAGCCGTGC...TAAGGAACAGTGAGGTCGCCGGTGGGGAGCTTGGCTGGGACACCAAGCAAATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR TCA 90 bp CTTTTCAGGCAGGTCCTCCCACGGGAATCCCATGACGGCCGACTCCACGACCACGTGGTCTGTGCCGTCTaGATGATCCGGCTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LFRQVLPRESHDGRLHDHVVCAV*MIRLAV
Trigger: CACTGCCAGCCGGATCATTCAGACGGCACAGACCAC...GTGGTCGTGGAGTCGGCCGTCATGGGATTCCCGTGGGAGGACCTGCCTGAAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575578.1
CDS-3UTR TCA 90 bp CGAGTGCTGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGAGTTGATATCGTTTGCACCGAGGGGCTCTaGTCCATCCACACGCTGCGC +
Preference number: 4 (lower is better)
Translates to: RVLAGGRVSFWHHRVDIVCTEGL*SIHTLR
Trigger: GCGCAGCGTGTGGATGGATCAGAGCCCCTCGGTGCA...AACGATATCAACTCTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCAGCACTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR GCA 90 bp CTTCAGCTCCGGCTGCTCCGGCTGGTCACCGTTGTGGCGCTTTGTGGGCAGGGAGACTCAGACGCCTCCTaGTTCTCTCTCTTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: LQLRLLRLVTVVALCGQGDSDAS*FSLFSL
Trigger: CAGCGAGAAGAGAGAGAAGCAGGAGGCGTCTGAGTC...TCCCTGCCCACAAAGCGCCACAACGGTGACCAGCCGGAGCAGCCGGAGCTGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR GCA 90 bp GCCACTGCGGTAGGCCAGAGATGCACAGACGCGCAGTGTGACTCTGGTTTCCAGAGCGAGTTTGGGCTGTaGAGCGCCAGGCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: ATAVGQRCTDAQCDSGFQSEFGL*SARLRL
Trigger: GAGCCTGAGCCTGGCGCTGCACAGCCCAAACTCGCT...CTGGAAACCAGAGTCACACTGCGCGTCTGTGCATCTCTGGCCTACCGCAGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR GCA 90 bp CTCCCACGGGAATCCCATGACGGCCGACTCCACGACCACTTCCCCAGCATGACTGACCGGGGTGGTCTGTaGCGTCTGAATGATCCGGCT +
Preference number: 4 (lower is better)
Translates to: LPRESHDGRLHDHFPSMTDRGGL*RLNDPA
Trigger: AGCCGGATCATTCAGACGGCACAGACCACCCCGGTC...AGTCATGCTGGGGAAGTGGTCGTGGAGTCGGCCGTCATGGGATTCCCGTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575578.1
CDS-3UTR GCA 90 bp GAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGGTGCTCAGTGGACCAACCACAGGGCCCTaGACCCCCGAGTGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: EDRVSLVGRSSAQQVLSGPTTGP*TPECWR
Trigger: CCGCCAGCACTCGGGGGTGCAGGGCCCTGTGGTTGG...TCCACTGAGCACCTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR GCA 90 bp GCTCCGGCTGGTCACCGTTGTGGCGCTTTGTGGGCAGGGAGGCCGATGCGGATGAAGAGAACAGTTAAGTaGAGCTCGGTGAGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: APAGHRCGALWAGRPMRMKRTVK*SSVSPG
Trigger: GCCGGGACTCACCGAGCTGCACTTAACTGTTCTCTT...CATCCGCATCGGCCTCCCTGCCCACAAAGCGCCACAACGGTGACCAGCCGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR GCA 90 bp TTCCTACCACAAAACAGGAAATGCCCCAGACGTGCCCTGCAGGACGTGGCTCGGAGCCGGGCGAGGAGGTaGAGGGACCTCCCACTCTCA +
Preference number: 4 (lower is better)
Translates to: FLPQNRKCPRRALQDVARSRARR*RDLPLS
Trigger: TGAGAGTGGGAGGTCCCTGCACCTCCTCGCCCGGCT...CCGAGCCACGTCCTGCAGGGCACGTCTGGGGCATTTCCTGTTTTGTGGTAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR GCA 90 bp AGGTCCTCCCACGGGAATCCCATGACGGCCGACTCCACGACCACTTCCCCAGCAAGTGAGAAGGGGCTCTaGTCCCAGTACCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: RSSHGNPMTADSTTTSPASEKGL*SQYPQP
Trigger: TGGCTGTGGGTACTGGGAGCAGAGCCCCTTCTCACT...TGCTGGGGAAGTGGTCGTGGAGTCGGCCGTCATGGGATTCCCGTGGGAGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575578.1
CDS-3UTR CCA 90 bp AGAGCGGGAGTTCACAGCGACGCAGCTGAGGACGACGCAGGACCTCTCCCAAAGCAGGGGCGAGATGTGTaGCTGTACGGCCTTCACTGG +
Preference number: 4 (lower is better)
Translates to: RAGVHSDAAEDDAGPLPKQGRDV*LYGLHW
Trigger: CCAGTGAAGGCCGTACAGCCACACATCTCGCCCCTG...CTTTGGGAGAGGTCCTGCGTCGTCCTCAGCTGCGTCGCTGTGAACTCCCGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CCA 90 bp CGAGTGCTGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGAGTTGATATCGTTGCACTCCCGCGTGATTaGGAGAGGCTGGGGCACTCC +
Preference number: 4 (lower is better)
Translates to: RVLAGGRVSFWHHRVDIVALPRD*ERLGHS
Trigger: GGAGTGCCCCAGCCTCTCCCAATCACGCGGGAGTGC...AACGATATCAACTCTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCAGCACTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CCA 90 bp TTCCTACCACAAAACAGGAAATGCCCCAGACGTGCCCTGCAGGACGTGGCTCGGGCTGGGAGGTCGAGGTaGTCACTGGGGTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: FLPQNRKCPRRALQDVARAGRSR*SLGWPQ
Trigger: CTGTGGCCACCCCAGTGACCACCTCGACCTCCCAGC...CCGAGCCACGTCCTGCAGGGCACGTCTGGGGCATTTCCTGTTTTGTGGTAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CCA 90 bp GCAGTTCCTTCCCGGCACTGGCTCGTCCCTGGGTTCTCAAGGTTCCATGCGGCCGTGCCTGTTGTACTATaGTCACCGTCTGGACCGGGG +
Preference number: 4 (lower is better)
Translates to: AVPSRHWLVPGFSRFHAAVPVVL*SPSGPG
Trigger: CCCCGGTCCAGACGGTGACCATAGTACAACAGGCAC...GGCCGCATGGAACCTTGAGAACCCAGGGACGAGCCAGTGCCGGGAAGGAACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CCA 90 bp CGAGTGCTGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGAGTTGATATCGTTGCGGCATTGTTCACCTaGCCGTGGACCGCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: RVLAGGRVSFWHHRVDIVAALFT*PWTAVG
Trigger: CCCCACTGCGGTCCACGGCCAGGTGAACAATGCCGC...AACGATATCAACTCTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCAGCACTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CCA 90 bp TCGCGGGAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGGTGCTCGACCCTGCTCCACCATaGCGGCCGCTCACCGAAGGT +
Preference number: 4 (lower is better)
Translates to: SREDRVSLVGRSSAQQVLDPAPP*RPLTEG
Trigger: ACCTTCGGTGAGCGGCCGCCATGGTGGAGCAGGGTC...GAGCACCTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTCCCGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CCA 90 bp TGGTCCTCGCGGGAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGGGCCCATTGTTCACCTaGCCGTGGACCGCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: WSSREDRVSLVGRSSAQQGPLFT*PWTAVG
Trigger: CCCCACTGCGGTCCACGGCCAGGTGAACAATGGGCC...CTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTCCCGCGAGGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR CCA 90 bp CTCCTCCCTGCAATCGCGGTCGCAGTCTGTGGCCGCAGGTGTGGCCTCAACCGACGCTGTAGGTGTCTCTaGACAACCTTCCACCTGTCG +
Preference number: 4 (lower is better)
Translates to: LLPAIAVAVCGRRCGLNRRCRCL*TTFHLS
Trigger: CGACAGGTGGAAGGTTGTCCAGAGACACCTACAGCG...TCGGTTGAGGCCACACCTGCGGCCACAGACTGCGACCGCGATTGCAGGGAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR CCA 90 bp AAAGCTCTCCCGGTCGCTAGTTCTGGACACCCTTTTCCCTTACGGCTGCCGGTGCGCGGTCGCAGTCTGTaGCCGCAGGTGTGGCCTCAA +
Preference number: 4 (lower is better)
Translates to: KALPVASSGHPFPLRLPVRGRSL*PQVWPQ
Trigger: TTGAGGCCACACCTGCGGCCACAGACTGCGACCGCG...CACCGGCAGCCGTAAGGGAAAAGGGTGTCCAGAACTAGCGACCGGGAGAGCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR CCA 90 bp TCCGGGCTGCCGGAAAAGGCTTTGCTCTTGTCTCCAGAAGCACCTGCTGGTCTGCGCCGCGGCTGCAGTTaGTGTGAGCTGGGCAAACCC +
Preference number: 4 (lower is better)
Translates to: SGLPEKALLLSPEAPAGLRRGCS*CELGKP
Trigger: GGGTTTGCCCAGCTCACACCAACTGCAGCCGCGGCG...CAGACCAGCAGGTGCTTCTGGAGACAAGAGCAAAGCCTTTTCCGGCAGCCCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
3UTR CAA 72 bp CTCAGGGCAATGACGATGCCCTCGCCGTCTTCTGTCTaGATCCGCTTCAGCTCCGGCTGCTCCGGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: LRAMTMPSPSSV*IRFSSGCSGWS
Trigger: TGACCAGCCGGAGCAGCCGGAGCTGAAGCGGATCAAGACAGAAGACGGCGAGGGCATCGTCATTGCCCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR TCA 90 bp GAGTCCCGGCAGTTCCTTCCCGGCACTGGCTCGTCCCTGGGTTCTCAAGGTTCCAAATCCCGTTCAGGGTaGGCTGTTTGTCGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: ESRQFLPGTGSSLGSQGSKSRSG*AVCREP
Trigger: TGGCTCCCGACAAACAGCTCACCCTGAACGGGATTT...GGAACCTTGAGAACCCAGGGACGAGCCAGTGCCGGGAAGGAACTGCCGGGACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR TCA 90 bp CGCAGTGTGACTCTGGTTTCCAGTGGCCTTTCTCCTACGCTGACTCGGAACAGCGACAGCACTCCCGCGTaGTTGGGAGAGGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: RSVTLVSSGLSPTLTRNSDSTPA*LGEAGA
Trigger: TGCCCCAGCCTCTCCCAATCACGCGGGAGTGCTGTC...GCTGTTCCGAGTCAGCGTAGGAGAAAGGCCACTGGAAACCAGAGTCACACTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR TCA 90 bp AGGACAATGACGGAAGTGGGTAGACGACTGAAGGAGATCAGCTGTCCACCGCGTCTGACTGGACAGAGGTaGCCCTGGGGCGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: RTMTEVGRRLKEISCPPRLTGQR*PWGALG
Trigger: GCCCAGAGCGCCCCAGGGTCACCTCTGTCCAGTCAG...ACGCGGTGGACAGCTGATCTCCTTCAGTCGTCTACCCACTTCCGTCATTGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR TCA 90 bp TGCTGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGAGTTGATATCGTTAAAGCTGACTGGACAGAGGTaGCCCTGGGGCGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: CWREAASPFGTTELISLKLTGQR*PWGALG
Trigger: GCCCAGAGCGCCCCAGGGTCACCTCTGTCCAGTCAG...CTTTAACGATATCAACTCTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR TCA 90 bp GCTGCCGGTGGCGTGTCCACGCTCAGGGCAATGACGATGCCCTCGCCGTCTTCTGTGATTAAGACTGGCTaGCTGGACAGAGGTGACCCT +
Preference number: 4 (lower is better)
Translates to: AAGGVSTLRAMTMPSPSSVIKTG*LDRGDP
Trigger: AGGGTCACCTCTGTCCAGTCAGCCAGTCTTAATCAC...AGAAGACGGCGAGGGCATCGTCATTGCCCTGAGCGTGGACACGCCACCGGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR TCA 90 bp TGGTCCTCGCGGGAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGGACCGCAGTGGGGACTaGTGCCACGTGAGTGCCGTT +
Preference number: 4 (lower is better)
Translates to: WSSREDRVSLVGRSSAQQDRSGD*CHVSAV
Trigger: AACGGCACTCACGTGGCATCAGTCCCCACTGCGGTC...CTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTCCCGCGAGGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR TCA 90 bp TTCCTACCACAAAACAGGAAATGCCCCAGACGTGCCCTGCAGGACGTGGCTCGGCCACGCTCAGGGCAATaGCGATGCCCTCGCCGTCTT +
Preference number: 4 (lower is better)
Translates to: FLPQNRKCPRRALQDVARPRSGQ*RCPRRL
Trigger: AAGACGGCGAGGGCATCGTCATTGCCCTGAGCGTGG...CCGAGCCACGTCCTGCAGGGCACGTCTGGGGCATTTCCTGTTTTGTGGTAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR TCA 90 bp TCGCGGGAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGGTGCTCCCACGCTCAGGGCAATaGCGATGCCCTCGCCGTCTT +
Preference number: 4 (lower is better)
Translates to: SREDRVSLVGRSSAQQVLPRSGQ*RCPRRL
Trigger: AAGACGGCGAGGGCATCGTCATTGCCCTGAGCGTGG...GAGCACCTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTCCCGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR TCA 90 bp GGCCCTGCACCCCCGAGTGCTGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGAACCAGTTTATGGACTaGGCTTACACGGGAAAGTCT +
Preference number: 4 (lower is better)
Translates to: GPAPPSAGGRPRLLLAPQNQFMD*AYTGKS
Trigger: AGACTTTCCCGTGTAAGCTCAGTCCATAAACTGGTT...CTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCAGCACTCGGGGGTGCAGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR GCA 90 bp GCCACTGCGGTAGGCCAGAGATGCACAGACGCGCAGTGTGACTCTGGTTTCCAGGGAGGGGCAGGAGTTTaGAGCGCTGATGGTTCCCGT +
Preference number: 4 (lower is better)
Translates to: ATAVGQRCTDAQCDSGFQGGAGV*SADGSR
Trigger: ACGGGAACCATCAGCGCTGCAAACTCCTGCCCCTCC...CTGGAAACCAGAGTCACACTGCGCGTCTGTGCATCTCTGGCCTACCGCAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR GCA 90 bp TGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGAGTTGATATCGTTAAAGAAACCCTGCACCCCCGAGTaGTGGCGGGAGGCCGCGTCT +
Preference number: 4 (lower is better)
Translates to: WREAASPFGTTELISLKKPCTPE*WREAAS
Trigger: AGACGCGGCCTCCCGCCAGCACTCGGGGGTGCAGGG...TTTCTTTAACGATATCAACTCTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR GCA 90 bp TGCAGTCATTTCATACCTTTCAATGGGCGTCACCGCAGTGACGCTGCCCCAGCCAGCAGGCGCTGGCCGTaGCGTCCTCACACAGCGATG +
Preference number: 4 (lower is better)
Translates to: CSHFIPFNGRHRSDAAPASRRWP*RPHTAM
Trigger: CATCGCTGTGTGAGGACGGCACGGCCAGCGCCTGCT...GGCTGGGGCAGCGTCACTGCGGTGACGCCCATTGAAAGGTATGAAATGACTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR GCA 90 bp GTGCACGGCCCTCGGCCCTCGGCCGGCACACTCGGGAAGGGCCAGCGGTTTTCTTGTAACACGGAAATGTaGAGATGCCAGAGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: VHGPRPSAGTLGKGQRFSCNTEM*RCQSSF
Trigger: GAAGCTACTCTGGCATCTGCACATTTCCGTGTTACA...AGAAAACCGCTGGCCCTTCCCGAGTGTGCCGGCCGAGGGCCGAGGGCCGTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR GCA 90 bp TCCGGCTGGTCACCGTTGTGGCGCTTTGTGGGCAGGGAGGCCGATGCGGATGCGTGCCGGAAAAGGCTTTaGTCTTGTCTCCAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: SGWSPLWRFVGREADADACRKRL*SCLQKH
Trigger: GTGCTTCTGGAGACAAGAGCAAAGCCTTTTCCGGCA...CGCATCCGCATCGGCCTCCCTGCCCACAAAGCGCCACAACGGTGACCAGCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR GCA 90 bp CGCAGTGTGACTCTGGTTTCCAGTGGCCTTTCTCCTACGCTGACTCGGAACAGCGACAGCCGGGGCCACTaGGGTAGGCCAGAGATGCAC +
Preference number: 4 (lower is better)
Translates to: RSVTLVSSGLSPTLTRNSDSRGH*GRPEMH
Trigger: GTGCATCTCTGGCCTACCGCAGTGGCCCCGGCTGTC...GCTGTTCCGAGTCAGCGTAGGAGAAAGGCCACTGGAAACCAGAGTCACACTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR CCA 90 bp CGCAGTGTGACTCTGGTTTCCAGTGGCCTTTCTCCTACGCTGACTCGGAACAGCCGTCTGCACGACGGGTaGCTGGGAGGTCGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: RSVTLVSSGLSPTLTRNSRLHDG*LGGRGG
Trigger: ACCACCTCGACCTCCCAGCCACCCGTCGTGCAGACG...GCTGTTCCGAGTCAGCGTAGGAGAAAGGCCACTGGAAACCAGAGTCACACTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR CCA 90 bp TTCCTACCACAAAACAGGAAATGCCCCAGACGTGCCCTGCAGGACGTGGCTCGGGGTGACCGACACCGCTaGGATCTGGTGGACGACGTG +
Preference number: 4 (lower is better)
Translates to: FLPQNRKCPRRALQDVARGDRHR*DLVDDV
Trigger: CACGTCGTCCACCAGATCCCAGCGGTGTCGGTCACC...CCGAGCCACGTCCTGCAGGGCACGTCTGGGGCATTTCCTGTTTTGTGGTAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CCA 90 bp CATCTCTTTTCAGGCAGGTCCTCCCACGGGAATCCCATGACGGCCGACTCCACGACTATGGTCACCGTCTaGACCGGGGTGGTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: HLFSGRSSHGNPMTADSTTMVTV*TGVVCA
Trigger: GGCACAGACCACCCCGGTCCAGACGGTGACCATAGT...CGTGGAGTCGGCCGTCATGGGATTCCCGTGGGAGGACCTGCCTGAAAAGAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575578.1
CDS-3UTR CCA 90 bp TGGTCCTCGCGGGAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGGGCTGGTCACCGTTGTaGCGCTTTGTGGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: WSSREDRVSLVGRSSAQQGWSPL*RFVGRE
Trigger: CTCCCTGCCCACAAAGCGCCACAACGGTGACCAGCC...CTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTCCCGCGAGGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CCA 90 bp CCACAGCGTCCGTCCACCTGTCCACGCGAGCCACATGCTGAAATGGAGGTGGATTCACACAGCGATGCCTaGTCCTCGCGGGAGGACAGA +
Preference number: 4 (lower is better)
Translates to: PQRPSTCPREPHAEMEVDSHSDA*SSREDR
Trigger: TCTGTCCTCCCGCGAGGACCAGGCATCGCTGTGTGA...ATCCACCTCCATTTCAGCATGTGGCTCGCGTGGACAGGTGGACGGACGCTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
3UTR CAA 72 bp GCACCGAGGGGCTCTGATCCATCCACACGCTGCGCTTaGCTGCGGTCACACACACGGTCTCAGTCACGTGAT +
Preference number: 4 (lower is better)
Translates to: APRGSDPSTRCA*LRSHTRSQSRD
Trigger: ATCACGTGACTGAGACCGTGTGTGTGACCGCAGCAAAGCGCAGCGTGTGGATGGATCAGAGCCCCTCGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR TCA 90 bp ACAGCAGGCGCTGGCCGTGCCGTCCTCACACAGCGATGCCTGGTCCTCGCGGGATGTCAGCCATTAAATTaGGGTCAGATGGCATCACTC +
Preference number: 4 (lower is better)
Translates to: TAGAGRAVLTQRCLVLAGCQPLN*GQMASL
Trigger: GAGTGATGCCATCTGACCTCAATTTAATGGCTGACA...TCCCGCGAGGACCAGGCATCGCTGTGTGAGGACGGCACGGCCAGCGCCTGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR TCA 90 bp TGGTCCTCGCGGGAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGGCTGCCGCTGGACGGTaGTTAAGACTGGCTGACTGG +
Preference number: 4 (lower is better)
Translates to: WSSREDRVSLVGRSSAQQAAAGR*LRLADW
Trigger: CCAGTCAGCCAGTCTTAATCACCGTCCAGCGGCAGC...CTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTCCCGCGAGGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR TCA 90 bp TCGCGGGAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGGTGCTCGCTGCCGCTGGACGGTaGTTAAGACTGGCTGACTGG +
Preference number: 4 (lower is better)
Translates to: SREDRVSLVGRSSAQQVLAAAGR*LRLADW
Trigger: CCAGTCAGCCAGTCTTAATCACCGTCCAGCGGCAGC...GAGCACCTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTCCCGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR TCA 90 bp GGTGTCTCTGGACAACCTTCCACCTGTCGTTTCTCATCCCAGGTTCCGGGCTGCTCTGTGCCGTCTGAATaGTCCGGCTGGCAGTGCCGA +
Preference number: 4 (lower is better)
Translates to: GVSGQPSTCRFSSQVPGCSVPSE*SGWQCR
Trigger: TCGGCACTGCCAGCCGGATCATTCAGACGGCACAGA...GCAGCCCGGAACCTGGGATGAGAAACGACAGGTGGAAGGTTGTCCAGAGACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR GCA 90 bp GCAGTTGGTGTGAGCTGGGCAAACCCCGTGACCACCTCAGATGCTCCTCCCTGCATGGCCTGTGGTAGCTaGCGCTGGACGGTGATTAAG +
Preference number: 4 (lower is better)
Translates to: AVGVSWANPVTTSDAPPCMACGS*RWTVIK
Trigger: CTTAATCACCGTCCAGCGGCAGCTACCACAGGCCAT...GCAGGGAGGAGCATCTGAGGTGGTCACGGGGTTTGCCCAGCTCACACCAACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR GCA 90 bp CGCAGTGTGACTCTGGTTTCCAGTGGCCTTTCTCCTACGCTGACTCGGAACAGCGGGCAGGGAGGCCGATaGGGATGCGTGTGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: RSVTLVSSGLSPTLTRNSGQGGR*GCVCCQ
Trigger: TTGGCAACACACGCATCCGCATCGGCCTCCCTGCCC...GCTGTTCCGAGTCAGCGTAGGAGAAAGGCCACTGGAAACCAGAGTCACACTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR GCA 90 bp CTGACTCGGAACAGCATCCACGCTGTAGGTGTCTCTGGACAACCTTCCACCTGTCGCTTCAGCTCCGGCTaGTCCGGCTGGTCACCGTTG +
Preference number: 4 (lower is better)
Translates to: LTRNSIHAVGVSGQPSTCRFSSG*SGWSPL
Trigger: CAACGGTGACCAGCCGGAGCAGCCGGAGCTGAAGCG...ACAGGTGGAAGGTTGTCCAGAGACACCTACAGCGTGGATGCTGTTCCGAGTCAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR GCA 90 bp TTCCGGGCTGCCGGAAAAGGCTTTGCTCTTGTCTCCAGAAGCACCTGCTGGTCTGTCCTCACACAGCGATaGCTGGTCCTCGCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: FRAAGKGFALVSRSTCWSVLTQR*LVLAGG
Trigger: TCCTCCCGCGAGGACCAGGCATCGCTGTGTGAGGAC...AGACCAGCAGGTGCTTCTGGAGACAAGAGCAAAGCCTTTTCCGGCAGCCCGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR GCA 90 bp CCCTCGGCCCTCGGCCGGCACACTCGGGAAGGGCCAGCGGTTTTCTTCCTGAGGAATTCATCAGGCAGCTaGTGTAACACGGAAATGTGC +
Preference number: 4 (lower is better)
Translates to: PSALGRHTREGPAVFFLRNSSGS*CNTEMC
Trigger: GCACATTTCCGTGTTACAGCAGCTGCCTGATGAATT...CCTCAGGAAGAAAACCGCTGGCCCTTCCCGAGTGTGCCGGCCGAGGGCCGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CCA 90 bp TGCTGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGAGTTGATATCGTTAAAGGCACTCCCGCGTGATTaGGAGAGGCTGGGGCACTCC +
Preference number: 4 (lower is better)
Translates to: CWREAASPFGTTELISLKALPRD*ERLGHS
Trigger: GGAGTGCCCCAGCCTCTCCCAATCACGCGGGAGTGC...CTTTAACGATATCAACTCTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CCA 90 bp CGAGTGCTGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGAGTTGATATCGTTGGTCGAGGTGGTCACTaGGGTGGCCACAGTGTAGGT +
Preference number: 4 (lower is better)
Translates to: RVLAGGRVSFWHHRVDIVGRGGH*GGHSVG
Trigger: ACCTACACTGTGGCCACCCCAGTGACCACCTCGACC...AACGATATCAACTCTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCAGCACTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CCA 90 bp CCACAGCGTCCGTCCACCTGTCCACGCGAGCCACATGCTGAAATGGAGGTGGATTGGTCTCCATTCTCCTaGGCCTCTGCCTTAGGAGGG +
Preference number: 4 (lower is better)
Translates to: PQRPSTCPREPHAEMEVDWSPFS*ASALGG
Trigger: CCCTCCTAAGGCAGAGGCCCAGGAGAATGGAGACCA...ATCCACCTCCATTTCAGCATGTGGCTCGCGTGGACAGGTGGACGGACGCTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CCA 90 bp CGAGTGCTGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGAGTTGATATCGTTACTATGGTCACCGTCTaGACCGGGGTGGTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: RVLAGGRVSFWHHRVDIVTMVTV*TGVVCA
Trigger: GGCACAGACCACCCCGGTCCAGACGGTGACCATAGT...AACGATATCAACTCTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCAGCACTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CCA 90 bp CGTGTCCACGCTCAGGGCAATGACGATGCCCTCGCCGTCTTCTGTCTTGATCCGGTGCCTGTTGTACTATaGTCACCGTCTGGACCGGGG +
Preference number: 4 (lower is better)
Translates to: RVHAQGNDDALAVFCLDPVPVVL*SPSGPG
Trigger: CCCCGGTCCAGACGGTGACCATAGTACAACAGGCAC...CGGATCAAGACAGAAGACGGCGAGGGCATCGTCATTGCCCTGAGCGTGGACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR CCA 90 bp TTTTCAGGCAGGTCCTCCCACGGGAATCCCATGACGGCCGACTCCACGACCACTGTGCCTGTTGTACTATaGTCACCGTCTGGACCGGGG +
Preference number: 4 (lower is better)
Translates to: FSGRSSHGNPMTADSTTTVPVVL*SPSGPG
Trigger: CCCCGGTCCAGACGGTGACCATAGTACAACAGGCAC...AGTGGTCGTGGAGTCGGCCGTCATGGGATTCCCGTGGGAGGACCTGCCTGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575578.1
CDS-3UTR CCA 90 bp TGCTGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGAGTTGATATCGTTAAAGGGCCGTGGACCGCAGTaGGGACTGATGCCACGTGAG +
Preference number: 4 (lower is better)
Translates to: CWREAASPFGTTELISLKGRGPQ*GLMPRE
Trigger: CTCACGTGGCATCAGTCCCCACTGCGGTCCACGGCC...CTTTAACGATATCAACTCTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CCA 90 bp TTTTCAGGCAGGTCCTCCCACGGGAATCCCATGACGGCCGACTCCACGACCACTTTGTTCACCTGGCCGTaGACCGCAGTGGGGACTGAT +
Preference number: 4 (lower is better)
Translates to: FSGRSSHGNPMTADSTTTLFTWP*TAVGTD
Trigger: ATCAGTCCCCACTGCGGTCCACGGCCAGGTGAACAA...AGTGGTCGTGGAGTCGGCCGTCATGGGATTCCCGTGGGAGGACCTGCCTGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575578.1
CDS-3UTR CCA 90 bp GAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGGTGCTCAGTGGACGTTGTGGCGCTTTGTaGGCAGGGAGGCCGATGCGG +
Preference number: 4 (lower is better)
Translates to: EDRVSLVGRSSAQQVLSGRCGAL*AGRPMR
Trigger: CCGCATCGGCCTCCCTGCCCACAAAGCGCCACAACG...TCCACTGAGCACCTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CCA 90 bp TCGCGGGAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGGTGCTCTCACACAGCGATGCCTaGTCCTCGCGGGAGGACAGA +
Preference number: 4 (lower is better)
Translates to: SREDRVSLVGRSSAQQVLSHSDA*SSREDR
Trigger: TCTGTCCTCCCGCGAGGACCAGGCATCGCTGTGTGA...GAGCACCTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTCCCGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CCA 90 bp GCAACCGAGGATCATGCCGCACACACTCTGAGTGCACCACGTGACGTGGGTCATGCCGCTCACCGAAGGTaGGGAGTAGACAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: ATEDHAAHTLSAPRDVGHAAHRR*GVDSRS
Trigger: TGACCTGCTGTCTACTCCCCACCTTCGGTGAGCGGC...ATGACCCACGTCACGTGGTGCACTCAGAGTGTGTGCGGCATGATCCTCGGTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CCA 90 bp GATGCGGATGCGTGTGTTGCCAACATGTGCAAAGGACTCGCCGCGGCTGCAGTTGCAGTTGGTGTGAGCTaGGCAAACCCCGTGACCACC +
Preference number: 4 (lower is better)
Translates to: DADACVANMCKGLAAAAVAVGVS*ANPVTT
Trigger: GGTGGTCACGGGGTTTGCCCAGCTCACACCAACTGC...AACTGCAGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACACGCATCCGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR TCA 90 bp CGCAGTGTGACTCTGGTTTCCAGTGGCCTTTCTCCTACGCTGACTCGGAACAGCGTGGTCTGTGCCGTCTaGATGATCCGGCTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: RSVTLVSSGLSPTLTRNSVVCAV*MIRLAV
Trigger: CACTGCCAGCCGGATCATTCAGACGGCACAGACCAC...GCTGTTCCGAGTCAGCGTAGGAGAAAGGCCACTGGAAACCAGAGTCACACTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR TCA 90 bp CTCCCACGGGAATCCCATGACGGCCGACTCCACGACCACTTCCCCAGCATGACTGGGACTGATGCCACGTaGGTGCCGTTTTGTGTTACA +
Preference number: 4 (lower is better)
Translates to: LPRESHDGRLHDHFPSMTGTDAT*VPFCVT
Trigger: TGTAACACAAAACGGCACTCACGTGGCATCAGTCCC...AGTCATGCTGGGGAAGTGGTCGTGGAGTCGGCCGTCATGGGATTCCCGTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575578.1
CDS-3UTR TCA 90 bp GAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGGTGCTCAGTGGAGACCGCAGTGGGGACTaGTGCCACGTGAGTGCCGTT +
Preference number: 4 (lower is better)
Translates to: EDRVSLVGRSSAQQVLSGDRSGD*CHVSAV
Trigger: AACGGCACTCACGTGGCATCAGTCCCCACTGCGGTC...TCCACTGAGCACCTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR GCA 90 bp ACCGCGTACTCTACTAAAGTGAGAGGAGGAGCAACCGAGGATCATGCCGCACACAGCGAGTTTGGGCTGTaGAGCGCCAGGCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: TAYSTKVRGGATEDHAAHSEFGL*SARLRL
Trigger: GAGCCTGAGCCTGGCGCTGCACAGCCCAAACTCGCT...GTGTGCGGCATGATCCTCGGTTGCTCCTCCTCTCACTTTAGTAGAGTACGCGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR GCA 90 bp TTCCGGGCTGCCGGAAAAGGCTTTGCTCTTGTCTCCAGAAGCACCTGCTGGTCTGACCGGGGTGGTCTGTaGCGTCTGAATGATCCGGCT +
Preference number: 4 (lower is better)
Translates to: FRAAGKGFALVSRSTCWSDRGGL*RLNDPA
Trigger: AGCCGGATCATTCAGACGGCACAGACCACCCCGGTC...AGACCAGCAGGTGCTTCTGGAGACAAGAGCAAAGCCTTTTCCGGCAGCCCGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR GCA 90 bp CCCAGCAGGTGCTCAGTGGAGACACCGTCTCCCAAATCAGGTTTTGTTGTGTGTAGCAGGCGCTGGCCGTaGCGTCCTCACACAGCGATG +
Preference number: 4 (lower is better)
Translates to: PSRCSVETPSPKSGFVVCSRRWP*RPHTAM
Trigger: CATCGCTGTGTGAGGACGGCACGGCCAGCGCCTGCT...ACACACAACAAAACCTGATTTGGGAGACGGTGTCTCCACTGAGCACCTGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR GCA 90 bp GTGCACGGCCCTCGGCCCTCGGCCGGCACACTCGGGAAGGGCCAGCGGTTTTCTTGGAGTGATGTGAAATaGCCAAGACCCCATTATTTT +
Preference number: 4 (lower is better)
Translates to: VHGPRPSAGTLGKGQRFSWSDVK*PRPHYF
Trigger: AAAATAATGGGGTCTTGGGCATTTCACATCACTCCA...AGAAAACCGCTGGCCCTTCCCGAGTGTGCCGGCCGAGGGCCGAGGGCCGTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR GCA 90 bp AAAACGTCTCCAAGGGGACATACGATGCATTTGCTTGGTGTCCCAGCCAAGCTCACCAGGGGCCAGGGCTaGGGCGACAGCAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: KTSPRGHTMHLLGVPAKLTRGQG*GDSSSA
Trigger: TGCTGAGCTGCTGTCGCCGCAGCCCTGGCCCCTGGT...GAGCTTGGCTGGGACACCAAGCAAATGCATCGTATGTCCCCTTGGAGACGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR GCA 90 bp TCCGGGCTGCCGGAAAAGGCTTTGCTCTTGTCTCCAGAAGCACCTGCTGGTCTGGTCTCCAGAAGCACCTaGTGGTCTGTCTGGATGGGG +
Preference number: 4 (lower is better)
Translates to: SGLPEKALLLSPEAPAGLVSRST*WSVWMG
Trigger: CCCCATCCAGACAGACCAGCAGGTGCTTCTGGAGAC...CAGACCAGCAGGTGCTTCTGGAGACAAGAGCAAAGCCTTTTCCGGCAGCCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR CCA 90 bp GCAACCGAGGATCATGCCGCACACACTCTGAGTGCACCACGTGACGTGGGTCATCTGTACGGCCTTCACTaGAGACTCAGACGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: ATEDHAAHTLSAPRDVGHLYGLH*RLRRLL
Trigger: CAGGAGGCGTCTGAGTCTCCAGTGAAGGCCGTACAG...ATGACCCACGTCACGTGGTGCACTCAGAGTGTGTGCGGCATGATCCTCGGTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CCA 90 bp CTCCTCCCTGCAATCGCGGTCGCAGTCTGTGGCCGCAGGTGTGGCCTCAACCGATTTGCTTTCAGAGGCTaGGTCTATCCTCCAGAACGA +
Preference number: 4 (lower is better)
Translates to: LLPAIAVAVCGRRCGLNRFAFRG*VYPPER
Trigger: TCGTTCTGGAGGATAGACCCAGCCTCTGAAAGCAAA...TCGGTTGAGGCCACACCTGCGGCCACAGACTGCGACCGCGATTGCAGGGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR CCA 90 bp TCCGGGCTGCCGGAAAAGGCTTTGCTCTTGTCTCCAGAAGCACCTGCTGGTCTGGCAAACCGGGCTTCCTaGATGACAGCGAGTTTGGGC +
Preference number: 4 (lower is better)
Translates to: SGLPEKALLLSPEAPAGLANRAS*MTASLG
Trigger: GCCCAAACTCGCTGTCATCCAGGAAGCCCGGTTTGC...CAGACCAGCAGGTGCTTCTGGAGACAAGAGCAAAGCCTTTTCCGGCAGCCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR CCA 90 bp TGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGAGTTGATATCGTTAAAGAAAGACCCTGGGGCGCTCTaGGCAAACCGGGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: WREAASPFGTTELISLKKDPGAL*ANRASW
Trigger: CCAGGAAGCCCGGTTTGCCCAGAGCGCCCCAGGGTC...TTTCTTTAACGATATCAACTCTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CCA 90 bp TGCCGGAAAAGGCTTTGCTCTTGTCTCCAGAAGCACCTGCTGGTCTGTCTGGATGCTGGGAGGTCGAGGTaGTCACTGGGGTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: CRKRLCSCLQKHLLVCLDAGRSR*SLGWPQ
Trigger: CTGTGGCCACCCCAGTGACCACCTCGACCTCCCAGC...ATCCAGACAGACCAGCAGGTGCTTCTGGAGACAAGAGCAAAGCCTTTTCCGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR CCA 90 bp CCCAGCAGGTGCTCAGTGGAGACACCGTCTCCCAAATCAGGTTTTGTTGTGTGTCGTCTGCACGACGGGTaGCTGGGAGGTCGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: PSRCSVETPSPKSGFVVCRLHDG*LGGRGG
Trigger: ACCACCTCGACCTCCCAGCCACCCGTCGTGCAGACG...ACACACAACAAAACCTGATTTGGGAGACGGTGTCTCCACTGAGCACCTGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CCA 90 bp TCGCGGGAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGGTGCTCTTGTTCACCTGGCCGTaGACCGCAGTGGGGACTGAT +
Preference number: 4 (lower is better)
Translates to: SREDRVSLVGRSSAQQVLLFTWP*TAVGTD
Trigger: ATCAGTCCCCACTGCGGTCCACGGCCAGGTGAACAA...GAGCACCTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTCCCGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CCA 90 bp GTGAGAGGCACACTTCAGTCTGGGTTCAAGATGCAGAATGGTGCCTACGGCAAAGTGCCCTGCAGGACGTaGCTCGGACCCTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: VRGTLQSGFKMQNGAYGKVPCRT*LGPCST
Trigger: GGTGGAGCAGGGTCCGAGCCACGTCCTGCAGGGCAC...TTTGCCGTAGGCACCATTCTGCATCTTGAACCCAGACTGAAGTGTGCCTCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR TCA 90 bp CGAGTGCTGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGAGTTGATATCGTTGGAGTAAGGCGGCTTTaGATCATCCTTCGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: RVLAGGRVSFWHHRVDIVGVRRL*IILRAV
Trigger: GACAGCCCGAAGGATGATTCAAAGCCGCCTTACTCC...AACGATATCAACTCTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCAGCACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR TCA 90 bp GTGAGAGGCACACTTCAGTCTGGGTTCAAGATGCAGAATGGTGCCTACGGCAAAGTCCGGCCACACTGGTaGCCGACACCGCTGGGATCT +
Preference number: 4 (lower is better)
Translates to: VRGTLQSGFKMQNGAYGKVRPHW*PTPLGS
Trigger: AGATCCCAGCGGTGTCGGTCACCAGTGTGGCCGGAC...TTTGCCGTAGGCACCATTCTGCATCTTGAACCCAGACTGAAGTGTGCCTCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR TCA 90 bp GAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGGTGCTCAGTGGAGTGGTCTGTGCCGTCTaGATGATCCGGCTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: EDRVSLVGRSSAQQVLSGVVCAV*MIRLAV
Trigger: CACTGCCAGCCGGATCATTCAGACGGCACAGACCAC...TCCACTGAGCACCTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR TCA 90 bp GCTGCCGGTGGCGTGTCCACGCTCAGGGCAATGACGATGCCCTCGCCGTCTTCTAGAAATGGAGTGATGTaGAATGCCCAAGACCCCATT +
Preference number: 4 (lower is better)
Translates to: AAGGVSTLRAMTMPSPSSRNGVM*NAQDPI
Trigger: AATGGGGTCTTGGGCATTTCACATCACTCCATTTCT...AGAAGACGGCGAGGGCATCGTCATTGCCCTGAGCGTGGACACGCCACCGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR TCA 90 bp GAGTCCCGGCAGTTCCTTCCCGGCACTGGCTCGTCCCTGGGTTCTCAAGGTTCCAATGAAAAAGCCAAGTaGACGTGGCAGAGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: ESRQFLPGTGSSLGSQGSNEKAK*TWQSEE
Trigger: CTCCTCACTCTGCCACGTTCACTTGGCTTTTTCATT...GGAACCTTGAGAACCCAGGGACGAGCCAGTGCCGGGAAGGAACTGCCGGGACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR TCA 90 bp TGGTCCTCGCGGGAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGTCTAGCGGAGGACAATaGCGGAAGTGGGTAGACGAC +
Preference number: 4 (lower is better)
Translates to: WSSREDRVSLVGRSSAQQSSGGQ*RKWVDD
Trigger: GTCGTCTACCCACTTCCGTCATTGTCCTCCGCTAGA...CTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTCCCGCGAGGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR TCA 90 bp CTCCCACGGGAATCCCATGACGGCCGACTCCACGACCACTTCCCCAGCATGACTACCACTTCCCCAGCATaGCTAGATTTCCTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: LPRESHDGRLHDHFPSMTTTSPA*LDFLQL
Trigger: AAGCTGCAGGAAATCTAGTCATGCTGGGGAAGTGGT...AGTCATGCTGGGGAAGTGGTCGTGGAGTCGGCCGTCATGGGATTCCCGTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575578.1
CDS-3UTR GCA 90 bp AGCTTACACGGGAAAGTCTACCCCCGACTCCTTCTGGATAGTAACATACACAGCAGGGGCCAGCACGGCTaGCGGGGTGACCACAGCTTG +
Preference number: 4 (lower is better)
Translates to: SLHGKVYPRLLLDSNIHSRGQHG*RGDHSL
Trigger: CAAGCTGTGGTCACCCCGGCAGCCGTGCTGGCCCCT...GCTGTGTATGTTACTATCCAGAAGGAGTCGGGGGTAGACTTTCCCGTGTAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR GCA 90 bp TGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGAGTTGATATCGTTAAAGAAACGCTTCAGCTCCGGCTaGTCCGGCTGGTCACCGTTG +
Preference number: 4 (lower is better)
Translates to: WREAASPFGTTELISLKKRFSSG*SGWSPL
Trigger: CAACGGTGACCAGCCGGAGCAGCCGGAGCTGAAGCG...TTTCTTTAACGATATCAACTCTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR GCA 90 bp CCCAGCAGGTGCTCAGTGGAGACACCGTCTCCCAAATCAGGTTTTGTTGTGTGTGTCCTCACACAGCGATaGCTGGTCCTCGCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: PSRCSVETPSPKSGFVVCVLTQR*LVLAGG
Trigger: TCCTCCCGCGAGGACCAGGCATCGCTGTGTGAGGAC...ACACACAACAAAACCTGATTTGGGAGACGGTGTCTCCACTGAGCACCTGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR GCA 90 bp TGCAGTCATTTCATACCTTTCAATGGGCGTCACCGCAGTGACGCTGCCCCAGCCGTTCTCAAGGTTCCATaGGGCCACAGCGTCCGTCCA +
Preference number: 4 (lower is better)
Translates to: CSHFIPFNGRHRSDAAPAVLKVP*GHSVRP
Trigger: TGGACGGACGCTGTGGCCGCATGGAACCTTGAGAAC...GGCTGGGGCAGCGTCACTGCGGTGACGCCCATTGAAAGGTATGAAATGACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR GCA 90 bp ATACAAACATACCACGGAGAGACCTGGGATCTGAGTTTCAAAAGGGCCTGTGATCGCCCTCTCCCCATGTaGACGGCCCTCGGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: IQTYHGETWDLSFKRACDRPLPM*TALGPR
Trigger: CCGAGGGCCGAGGGCCGTGCACATGGGGAGAGGGCG...ATCACAGGCCCTTTTGAAACTCAGATCCCAGGTCTCTCCGTGGTATGTTTGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR GCA 90 bp GAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGGTGCTCAGTGGACCACACGCTGCGCTTTaGTGCGGTCACACACACGGT +
Preference number: 4 (lower is better)
Translates to: EDRVSLVGRSSAQQVLSGPHAAL*CGHTHG
Trigger: ACCGTGTGTGTGACCGCAGCAAAGCGCAGCGTGTGG...TCCACTGAGCACCTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR GCA 90 bp AGAGCGGGAGTTCACAGCGACGCAGCTGAGGACGACGCAGGACCTCTCCCAAAGGACATACGATGCATTTaGTTGGTGTCCCAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: RAGVHSDAAEDDAGPLPKDIRCI*LVSQPS
Trigger: GCTTGGCTGGGACACCAAGCAAATGCATCGTATGTC...CTTTGGGAGAGGTCCTGCGTCGTCCTCAGCTGCGTCGCTGTGAACTCCCGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR GCA 90 bp CAGGTCCTCCCACGGGAATCCCATGACGGCCGACTCCACGACCACTTCCCCAGCCCTGCAGCTTCGAAATaGAAACATTGCCTCAGACAA +
Preference number: 4 (lower is better)
Translates to: QVLPRESHDGRLHDHFPSPAASK*KHCLRQ
Trigger: TTGTCTGAGGCAATGTTTGCATTTCGAAGCTGCAGG...GCTGGGGAAGTGGTCGTGGAGTCGGCCGTCATGGGATTCCCGTGGGAGGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575578.1
CDS-3UTR CCA 90 bp TGCAGTCATTTCATACCTTTCAATGGGCGTCACCGCAGTGACGCTGCCCCAGCCGAACGAGCCTTTGCCTaGTTCTTCCTGGGAACGCGG +
Preference number: 4 (lower is better)
Translates to: CSHFIPFNGRHRSDAAPAERAFA*FFLGTR
Trigger: CCGCGTTCCCAGGAAGAACCAGGCAAAGGCTCGTTC...GGCTGGGGCAGCGTCACTGCGGTGACGCCCATTGAAAGGTATGAAATGACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CCA 90 bp TGGTCCTCGCGGGAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGGTGATTGGGAGAGGCTaGGGCACTCCTAGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: WSSREDRVSLVGRSSAQQVIGRG*GTPRRE
Trigger: CTCTCTTCTAGGAGTGCCCCAGCCTCTCCCAATCAC...CTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTCCCGCGAGGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CCA 90 bp TCCGGGCTGCCGGAAAAGGCTTTGCTCTTGTCTCCAGAAGCACCTGCTGGTCTGTGTGGTAGCTGCCGCTaGACGGTGATTAAGACTGGC +
Preference number: 4 (lower is better)
Translates to: SGLPEKALLLSPEAPAGLCGSCR*TVIKTG
Trigger: GCCAGTCTTAATCACCGTCCAGCGGCAGCTACCACA...CAGACCAGCAGGTGCTTCTGGAGACAAGAGCAAAGCCTTTTCCGGCAGCCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR CCA 90 bp CCCAGCAGGTGCTCAGTGGAGACACCGTCTCCCAAATCAGGTTTTGTTGTGTGTTGCACGACGGGTGGCTaGGAGGTCGAGGTGGTCACT +
Preference number: 4 (lower is better)
Translates to: PSRCSVETPSPKSGFVVCCTTGG*EVEVVT
Trigger: AGTGACCACCTCGACCTCCCAGCCACCCGTCGTGCA...ACACACAACAAAACCTGATTTGGGAGACGGTGTCTCCACTGAGCACCTGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CCA 90 bp TGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGAGTTGATATCGTTAAAGAAAGTGCCGAGCGTGGCGTaGCCAATGGCGGGAATAGGC +
Preference number: 4 (lower is better)
Translates to: WREAASPFGTTELISLKKVPSVA*PMAGIG
Trigger: GCCTATTCCCGCCATTGGCCACGCCACGCTCGGCAC...TTTCTTTAACGATATCAACTCTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR TCA 90 bp CGAGTGCTGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGAGTTGATATCGTTTGGTGTCTGGAATGTTaGTGGTCAGGGGCGAGATGT +
Preference number: 4 (lower is better)
Translates to: RVLAGGRVSFWHHRVDIVWCLEC*WSGARC
Trigger: ACATCTCGCCCCTGACCATCAACATTCCAGACACCA...AACGATATCAACTCTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCAGCACTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR TCA 90 bp TGGGTTCTCAAGGTTCCATGCGGCCACAGCGTCCGTCCACCTGTCCACGCGAGCTGTCAGCCATTAAATTaGGGTCAGATGGCATCACTC +
Preference number: 4 (lower is better)
Translates to: WVLKVPCGHSVRPPVHASCQPLN*GQMASL
Trigger: GAGTGATGCCATCTGACCTCAATTTAATGGCTGACA...GCTCGCGTGGACAGGTGGACGGACGCTGTGGCCGCATGGAACCTTGAGAACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR TCA 90 bp TTTTCAGGCAGGTCCTCCCACGGGAATCCCATGACGGCCGACTCCACGACCACTATTGGTAGCTGGTGTTaGCCTAGAGGTGCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: FSGRSSHGNPMTADSTTTIGSWC*PRGACC
Trigger: ACAACAGGCACCTCTAGGTCAACACCAGCTACCAAT...AGTGGTCGTGGAGTCGGCCGTCATGGGATTCCCGTGGGAGGACCTGCCTGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575578.1
CDS-3UTR TCA 90 bp TCGCGGGAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGGTGCTCGGGACTGATGCCACGTaGGTGCCGTTTTGTGTTACA +
Preference number: 4 (lower is better)
Translates to: SREDRVSLVGRSSAQQVLGTDAT*VPFCVT
Trigger: TGTAACACAAAACGGCACTCACGTGGCATCAGTCCC...GAGCACCTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTCCCGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR TCA 90 bp CCCAGCAGGTGCTCAGTGGAGACACCGTCTCCCAAATCAGGTTTTGTTGTGTGTCGCCGTCTTCTGTCTTaGTCCGCTTCAGCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: PSRCSVETPSPKSGFVVCRRLLS*SASAPA
Trigger: AGCCGGAGCTGAAGCGGATCAAGACAGAAGACGGCG...ACACACAACAAAACCTGATTTGGGAGACGGTGTCTCCACTGAGCACCTGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR GCA 90 bp GCCGCTTCCAGGCCACACCCAGGAAATCTACAAGAGGCGAGAGTATTTTTCCCTATTCTCCTGGGCCTCTaGCTTAGGAGGGGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: AASRPHPGNLQEARVFFPILLGL*LRRGQH
Trigger: GTGCTGGCCCCTCCTAAGGCAGAGGCCCAGGAGAAT...AGGGAAAAATACTCTCGCCTCTTGTAGATTTCCTGGGTGTGGCCTGGAAGCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575578.1
CDS-3UTR GCA 90 bp CCACAGCGTCCGTCCACCTGTCCACGCGAGCCACATGCTGAAATGGAGGTGGATTGCGGATGCGTGTGTTaGCAACATGTGCAAAGGACT +
Preference number: 4 (lower is better)
Translates to: PQRPSTCPREPHAEMEVDCGCVC*QHVQRT
Trigger: AGTCCTTTGCACATGTTGGCAACACACGCATCCGCA...ATCCACCTCCATTTCAGCATGTGGCTCGCGTGGACAGGTGGACGGACGCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR GCA 90 bp TGCTGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGAGTTGATATCGTTAAAGGATCCATCCACACGCTaGGCTTTGCTGCGGTCACAC +
Preference number: 4 (lower is better)
Translates to: CWREAASPFGTTELISLKDPSTR*ALLRSH
Trigger: GTGTGACCGCAGCAAAGCGCAGCGTGTGGATGGATC...CTTTAACGATATCAACTCTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR GCA 90 bp CGCAGTGTGACTCTGGTTTCCAGTGGCCTTTCTCCTACGCTGACTCGGAACAGCTGTGTTGCCAACATGTaGAAAGGACTCGCCGCGGCT +
Preference number: 4 (lower is better)
Translates to: RSVTLVSSGLSPTLTRNSCVANM*KGLAAA
Trigger: AGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACA...GCTGTTCCGAGTCAGCGTAGGAGAAAGGCCACTGGAAACCAGAGTCACACTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR CCA 90 bp GCATTTGCTTGGTGTCCCAGCCAAGCTCCCCACCGGCGACCTCACTGTTCCTTATTGCCTGGTTCTTCCTaGGAACGCGGCACTTTGATG +
Preference number: 4 (lower is better)
Translates to: AFAWCPSQAPHRRPHCSLLPGSS*ERGTLM
Trigger: CATCAAAGTGCCGCGTTCCCAGGAAGAACCAGGCAA...TAAGGAACAGTGAGGTCGCCGGTGGGGAGCTTGGCTGGGACACCAAGCAAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CCA 90 bp TGCTGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGAGTTGATATCGTTAAAGGAACGAGCCTTTGCCTaGTTCTTCCTGGGAACGCGG +
Preference number: 4 (lower is better)
Translates to: CWREAASPFGTTELISLKERAFA*FFLGTR
Trigger: CCGCGTTCCCAGGAAGAACCAGGCAAAGGCTCGTTC...CTTTAACGATATCAACTCTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CCA 90 bp TGCAGTCATTTCATACCTTTCAATGGGCGTCACCGCAGTGACGCTGCCCCAGCCTGTGGTAGCTGCCGCTaGACGGTGATTAAGACTGGC +
Preference number: 4 (lower is better)
Translates to: CSHFIPFNGRHRSDAAPACGSCR*TVIKTG
Trigger: GCCAGTCTTAATCACCGTCCAGCGGCAGCTACCACA...GGCTGGGGCAGCGTCACTGCGGTGACGCCCATTGAAAGGTATGAAATGACTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CCA 90 bp CTGACTCGGAACAGCATCCACGCTGTAGGTGTCTCTGGACAACCTTCCACCTGTTGGTCTCCATTCTCCTaGGCCTCTGCCTTAGGAGGG +
Preference number: 4 (lower is better)
Translates to: LTRNSIHAVGVSGQPSTCWSPFS*ASALGG
Trigger: CCCTCCTAAGGCAGAGGCCCAGGAGAATGGAGACCA...ACAGGTGGAAGGTTGTCCAGAGACACCTACAGCGTGGATGCTGTTCCGAGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR CCA 90 bp GAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGGTGCTCAGTGGATTGTTCACCTGGCCGTaGACCGCAGTGGGGACTGAT +
Preference number: 4 (lower is better)
Translates to: EDRVSLVGRSSAQQVLSGLFTWP*TAVGTD
Trigger: ATCAGTCCCCACTGCGGTCCACGGCCAGGTGAACAA...TCCACTGAGCACCTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CCA 90 bp TGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGAGTTGATATCGTTAAAGAAAGGCTGGTCACCGTTGTaGCGCTTTGTGGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: WREAASPFGTTELISLKKGWSPL*RFVGRE
Trigger: CTCCCTGCCCACAAAGCGCCACAACGGTGACCAGCC...TTTCTTTAACGATATCAACTCTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CCA 90 bp TTCCGGGCTGCCGGAAAAGGCTTTGCTCTTGTCTCCAGAAGCACCTGCTGGTCTCCAGCAGGTGCTCAGTaGAGACACCGTCTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: FRAAGKGFALVSRSTCWSPAGAQ*RHRLPN
Trigger: ATTTGGGAGACGGTGTCTCCACTGAGCACCTGCTGG...AGACCAGCAGGTGCTTCTGGAGACAAGAGCAAAGCCTTTTCCGGCAGCCCGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR CCA 90 bp ACCGCGTACTCTACTAAAGTGAGAGGAGGAGCAACCGAGGATCATGCCGCACACTGTGACCAACAGAGCTaGAGCCCTCTGTGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: TAYSTKVRGGATEDHAAHCDQQS*SPLWRE
Trigger: CTCCCTCCACAGAGGGCTCCAGCTCTGTTGGTCACA...GTGTGCGGCATGATCCTCGGTTGCTCCTCCTCTCACTTTAGTAGAGTACGCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CCA 90 bp TCGCGGGAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGGTGCTCGACTCTGGTTTCCAGTaGCCTTTCTCCTACGCTGAC +
Preference number: 4 (lower is better)
Translates to: SREDRVSLVGRSSAQQVLDSGFQ*PFSYAD
Trigger: GTCAGCGTAGGAGAAAGGCCACTGGAAACCAGAGTC...GAGCACCTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTCCCGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR TCA 90 bp TCCGGGCTGCCGGAAAAGGCTTTGCTCTTGTCTCCAGAAGCACCTGCTGGTCTGGAGATTGTGGCGAATTaGATTCTGCCAGCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: SGLPEKALLLSPEAPAGLEIVAN*ILPALV
Trigger: GACAAGGGCTGGCAGAATTCAATTCGCCACAATCTC...CAGACCAGCAGGTGCTTCTGGAGACAAGAGCAAAGCCTTTTCCGGCAGCCCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR TCA 90 bp TCGCGGGAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGGTGCTCTTGGGTTTTCAGTGCTaGGAGGTGAAGTCCAACCAC +
Preference number: 4 (lower is better)
Translates to: SREDRVSLVGRSSAQQVLLGFQC*EVKSNH
Trigger: GTGGTTGGACTTCACCTCTCAGCACTGAAAACCCAA...GAGCACCTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTCCCGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR TCA 90 bp GATGCGTGTGTTGCCAACATGTGCAAAGGACTCGCCGCGGCTGCAGTTGGTGTGTTGGGTTTTCAGTGCTaGGAGGTGAAGTCCAACCAC +
Preference number: 4 (lower is better)
Translates to: DACVANMCKGLAAAAVGVLGFQC*EVKSNH
Trigger: GTGGTTGGACTTCACCTCTCAGCACTGAAAACCCAA...CACACCAACTGCAGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACACGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR TCA 90 bp GTGAGAGGCACACTTCAGTCTGGGTTCAAGATGCAGAATGGTGCCTACGGCAAAGTGAACGTGGCAGAGTaGGGAGGAGACAGGAGCGTG +
Preference number: 4 (lower is better)
Translates to: VRGTLQSGFKMQNGAYGKVNVAE*GGDRSV
Trigger: CACGCTCCTGTCTCCTCCTCACTCTGCCACGTTCAC...TTTGCCGTAGGCACCATTCTGCATCTTGAACCCAGACTGAAGTGTGCCTCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR GCA 90 bp TGCAGTCATTTCATACCTTTCAATGGGCGTCACCGCAGTGACGCTGCCCCAGCCTCCAGAACGAGCCTTTaGCTGGTTCTTCCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: CSHFIPFNGRHRSDAAPASRTSL*LVLPGN
Trigger: GTTCCCAGGAAGAACCAGGCAAAGGCTCGTTCTGGA...GGCTGGGGCAGCGTCACTGCGGTGACGCCCATTGAAAGGTATGAAATGACTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR GCA 90 bp TGGTCACCGTTGTGGCGCTTTGTGGGCAGGGAGGCCGATGCGGATGCGTGTGTTTGTAACACGGAAATGTaGAGATGCCAGAGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: WSPLWRFVGREADADACVCNTEM*RCQSSF
Trigger: GAAGCTACTCTGGCATCTGCACATTTCCGTGTTACA...AACACACGCATCCGCATCGGCCTCCCTGCCCACAAAGCGCCACAACGGTGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR GCA 90 bp TGCAGTCATTTCATACCTTTCAATGGGCGTCACCGCAGTGACGCTGCCCCAGCCAAGAGAACAGTTAAGTaGAGCTCGGTGAGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: CSHFIPFNGRHRSDAAPAKRTVK*SSVSPG
Trigger: GCCGGGACTCACCGAGCTGCACTTAACTGTTCTCTT...GGCTGGGGCAGCGTCACTGCGGTGACGCCCATTGAAAGGTATGAAATGACTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR GCA 90 bp TGGTCCTCGCGGGAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGCAAGGGGACATACGATaGATTTGCTTGGTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: WSSREDRVSLVGRSSAQQQGDIR*ICLVSQ
Trigger: CTGGGACACCAAGCAAATGCATCGTATGTCCCCTTG...CTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTCCCGCGAGGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CCA 90 bp CGTGTGCACCTTCCATCTGTGAGAGGCACACTTCAGTCTGGGTTCAAGATGCAGACGAGTTGCGGCCGATaGTCACCGAGCGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: RVHLPSVRGTLQSGFKMQTSCGR*SPSASS
Trigger: TGAAGAAGCGCTCGGTGACCATCGGCCGCAACTCGT...CTGCATCTTGAACCCAGACTGAAGTGTGCCTCTCACAGATGGAAGGTGCACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CCA 90 bp CCCAGCAGGTGCTCAGTGGAGACACCGTCTCCCAAATCAGGTTTTGTTGTGTGTCTGTACGGCCTTCACTaGAGACTCAGACGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: PSRCSVETPSPKSGFVVCLYGLH*RLRRLL
Trigger: CAGGAGGCGTCTGAGTCTCCAGTGAAGGCCGTACAG...ACACACAACAAAACCTGATTTGGGAGACGGTGTCTCCACTGAGCACCTGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CCA 90 bp CTGACTCGGAACAGCATCCACGCTGTAGGTGTCTCTGGACAACCTTCCACCTGTAGAGGGCTGATGAGGTaGGCCATGGTGTCTGGAATG +
Preference number: 4 (lower is better)
Translates to: LTRNSIHAVGVSGQPSTCRGLMR*AMVSGM
Trigger: CATTCCAGACACCATGGCCCACCTCATCAGCCCTCT...ACAGGTGGAAGGTTGTCCAGAGACACCTACAGCGTGGATGCTGTTCCGAGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR CCA 90 bp CCACAGCGTCCGTCCACCTGTCCACGCGAGCCACATGCTGAAATGGAGGTGGATTTTGCTTTCAGAGGCTaGGTCTATCCTCCAGAACGA +
Preference number: 4 (lower is better)
Translates to: PQRPSTCPREPHAEMEVDFAFRG*VYPPER
Trigger: TCGTTCTGGAGGATAGACCCAGCCTCTGAAAGCAAA...ATCCACCTCCATTTCAGCATGTGGCTCGCGTGGACAGGTGGACGGACGCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CCA 90 bp AGGACAATGACGGAAGTGGGTAGACGACTGAAGGAGATCAGCTGTCCACCGCGTGTGATTGGGAGAGGCTaGGGCACTCCTAGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: RTMTEVGRRLKEISCPPRVIGRG*GTPRRE
Trigger: CTCTCTTCTAGGAGTGCCCCAGCCTCTCCCAATCAC...ACGCGGTGGACAGCTGATCTCCTTCAGTCGTCTACCCACTTCCGTCATTGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CCA 90 bp GAGTCCCGGCAGTTCCTTCCCGGCACTGGCTCGTCCCTGGGTTCTCAAGGTTCCGAAGTAACCAGTTTATaGACTGAGCTTACACGGGAA +
Preference number: 4 (lower is better)
Translates to: ESRQFLPGTGSSLGSQGSEVTSL*TELTRE
Trigger: TTCCCGTGTAAGCTCAGTCCATAAACTGGTTACTTC...GGAACCTTGAGAACCCAGGGACGAGCCAGTGCCGGGAAGGAACTGCCGGGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR CAA 72 bp TTTCTCATCCCAGGTTCCGGGCTGCCGGAAAAGGCTTaGCTCTTGTCTCCAGAAGCACCTGCTGGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: FLIPGSGLPEKA*LLSPEAPAGLS
Trigger: AGACAGACCAGCAGGTGCTTCTGGAGACAAGAGCAAAGCCTTTTCCGGCAGCCCGGAACCTGGGATGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR TCA 90 bp CCACAGCGTCCGTCCACCTGTCCACGCGAGCCACATGCTGAAATGGAGGTGGATAGAAATGGAGTGATGTaGAATGCCCAAGACCCCATT +
Preference number: 4 (lower is better)
Translates to: PQRPSTCPREPHAEMEVDRNGVM*NAQDPI
Trigger: AATGGGGTCTTGGGCATTTCACATCACTCCATTTCT...ATCCACCTCCATTTCAGCATGTGGCTCGCGTGGACAGGTGGACGGACGCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR TCA 90 bp TCGCGGGAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGGTGCTCTTTCTTTGCCCCAAATaGAATCCACGGAAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SREDRVSLVGRSSAQQVLFLCPK*NPRKGP
Trigger: AGGCCCTTTCCGTGGATTTCATTTGGGGCAAAGAAA...GAGCACCTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTCCCGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR TCA 90 bp GATGCGTGTGTTGCCAACATGTGCAAAGGACTCGCCGCGGCTGCAGTTGGTGTGTTTCTTTGCCCCAAATaGAATCCACGGAAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: DACVANMCKGLAAAAVGVFLCPK*NPRKGP
Trigger: AGGCCCTTTCCGTGGATTTCATTTGGGGCAAAGAAA...CACACCAACTGCAGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACACGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR GCA 90 bp GCAGTTCCTTCCCGGCACTGGCTCGTCCCTGGGTTCTCAAGGTTCCATGCGGCCCCTGTTCTATTAATTTaGTTTCAGAGGCTGGGTCTA +
Preference number: 4 (lower is better)
Translates to: AVPSRHWLVPGFSRFHAAPVLLI*FQRLGL
Trigger: TAGACCCAGCCTCTGAAAGCAAATTAATAGAACAGG...GGCCGCATGGAACCTTGAGAACCCAGGGACGAGCCAGTGCCGGGAAGGAACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR GCA 90 bp TGGGTTCTCAAGGTTCCATGCGGCCACAGCGTCCGTCCACCTGTCCACGCGAGCCCTGTTCTATTAATTTaGTTTCAGAGGCTGGGTCTA +
Preference number: 4 (lower is better)
Translates to: WVLKVPCGHSVRPPVHASPVLLI*FQRLGL
Trigger: TAGACCCAGCCTCTGAAAGCAAATTAATAGAACAGG...GCTCGCGTGGACAGGTGGACGGACGCTGTGGCCGCATGGAACCTTGAGAACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR GCA 90 bp GGACTGAGCTTACACGGGAAAGTCTACCCCCGACTCCTTCTGGATAGTAACATACTTTTCCCTTACGGCTaGCGGTGGCGTGTCCACGCT +
Preference number: 4 (lower is better)
Translates to: GLSLHGKVYPRLLLDSNILFPYG*RWRVHA
Trigger: AGCGTGGACACGCCACCGGCAGCCGTAAGGGAAAAG...TATGTTACTATCCAGAAGGAGTCGGGGGTAGACTTTCCCGTGTAAGCTCAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CCA 90 bp GAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGGTGCTCAGTGGATTGCCTGGTTCTTCCTaGGAACGCGGCACTTTGATG +
Preference number: 4 (lower is better)
Translates to: EDRVSLVGRSSAQQVLSGLPGSS*ERGTLM
Trigger: CATCAAAGTGCCGCGTTCCCAGGAAGAACCAGGCAA...TCCACTGAGCACCTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CCA 90 bp CTCAATGTATTAGAAACTCTCATCTCTTTTCAGGCAGGTCCTCCCACGGGAATCGTGCCGAGCGTGGCGTaGCCAATGGCGGGAATAGGC +
Preference number: 4 (lower is better)
Translates to: LNVLETLISFQAGPPTGIVPSVA*PMAGIG
Trigger: GCCTATTCCCGCCATTGGCCACGCCACGCTCGGCAC...GATTCCCGTGGGAGGACCTGCCTGAAAAGAGATGAGAGTTTCTAATACATTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575578.1
CDS-3UTR CCA 90 bp AGGATTGGGTTCGGTTCTGAAAGGTCAGGGACATTTCCTACCACAAAACAGGAAGGCCGTGGACCGCAGTaGGGACTGATGCCACGTGAG +
Preference number: 4 (lower is better)
Translates to: RIGFGSERSGTFPTTKQEGRGPQ*GLMPRE
Trigger: CTCACGTGGCATCAGTCCCCACTGCGGTCCACGGCC...TTCCTGTTTTGTGGTAGGAAATGTCCCTGACCTTTCAGAACCGAACCCAATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CCA 90 bp GGACTGAGCTTACACGGGAAAGTCTACCCCCGACTCCTTCTGGATAGTAACATAGTTCCTTCCCGGCACTaGCTCGTCCCTGGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: GLSLHGKVYPRLLLDSNIVPSRH*LVPGFS
Trigger: TGAGAACCCAGGGACGAGCCAGTGCCGGGAAGGAAC...TATGTTACTATCCAGAAGGAGTCGGGGGTAGACTTTCCCGTGTAAGCTCAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CCA 90 bp TTCCTACCACAAAACAGGAAATGCCCCAGACGTGCCCTGCAGGACGTGGCTCGGAGGCACACTTCAGTCTaGGTTCAAGATGCAGAATGG +
Preference number: 4 (lower is better)
Translates to: FLPQNRKCPRRALQDVARRHTSV*VQDAEW
Trigger: CCATTCTGCATCTTGAACCCAGACTGAAGTGTGCCT...CCGAGCCACGTCCTGCAGGGCACGTCTGGGGCATTTCCTGTTTTGTGGTAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CCA 90 bp AAAACGTCTCCAAGGGGACATACGATGCATTTGCTTGGTGTCCCAGCCAAGCTCGTGCACCACGTGACGTaGGTCATACGGGAGTTCCCT +
Preference number: 4 (lower is better)
Translates to: KTSPRGHTMHLLGVPAKLVHHVT*VIREFP
Trigger: AGGGAACTCCCGTATGACCCACGTCACGTGGTGCAC...GAGCTTGGCTGGGACACCAAGCAAATGCATCGTATGTCCCCTTGGAGACGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR TCA 90 bp ACCGCGTACTCTACTAAAGTGAGAGGAGGAGCAACCGAGGATCATGCCGCACACATTGGTAGCTGGTGTTaGCCTAGAGGTGCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: TAYSTKVRGGATEDHAAHIGSWC*PRGACC
Trigger: ACAACAGGCACCTCTAGGTCAACACCAGCTACCAAT...GTGTGCGGCATGATCCTCGGTTGCTCCTCCTCTCACTTTAGTAGAGTACGCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR TCA 90 bp GCAGTTCCTTCCCGGCACTGGCTCGTCCCTGGGTTCTCAAGGTTCCATGCGGCCGACAGAGCAGAATCCTaGTTATTTTACAAACTGCAA +
Preference number: 4 (lower is better)
Translates to: AVPSRHWLVPGFSRFHAADRAES*LFYKLQ
Trigger: TTGCAGTTTGTAAAATAATCAGGATTCTGCTCTGTC...GGCCGCATGGAACCTTGAGAACCCAGGGACGAGCCAGTGCCGGGAAGGAACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR GCA 90 bp CTCTCATCTCTTTTCAGGCAGGTCCTCCCACGGGAATCCCATGACGGCCGACTCCTGATGCCACGTGAGTaGCGTTTTGTGTTACAGTTT +
Preference number: 4 (lower is better)
Translates to: LSSLFRQVLPRESHDGRLLMPRE*RFVLQF
Trigger: AAACTGTAACACAAAACGGCACTCACGTGGCATCAG...GAGTCGGCCGTCATGGGATTCCCGTGGGAGGACCTGCCTGAAAAGAGATGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575578.1
CDS-3UTR GCA 90 bp AAAACGTCTCCAAGGGGACATACGATGCATTTGCTTGGTGTCCCAGCCAAGCTCTGTGTTGCCAACATGTaGAAAGGACTCGCCGCGGCA +
Preference number: 4 (lower is better)
Translates to: KTSPRGHTMHLLGVPAKLCVANM*KGLAAA
Trigger: TGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACA...GAGCTTGGCTGGGACACCAAGCAAATGCATCGTATGTCCCCTTGGAGACGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR GCA 90 bp CGTTGTTTCTTTGCCCCAAATGAAATCCACGGAAAGGGCCTGTGTGATTCTGAAGGGCAGGGAGGCCGATaGGGATGCGTGTGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: RCFFAPNEIHGKGLCDSEGQGGR*GCVCCQ
Trigger: TTGGCAACACACGCATCCGCATCGGCCTCCCTGCCC...TTCAGAATCACACAGGCCCTTTCCGTGGATTTCATTTGGGGCAAAGAAACAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR GCA 90 bp TCGCGGGAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGGTGCTCAATTCATCAGGCAGCTaGTGTAACACGGAAATGTGC +
Preference number: 4 (lower is better)
Translates to: SREDRVSLVGRSSAQQVLNSSGS*CNTEMC
Trigger: GCACATTTCCGTGTTACAGCAGCTGCCTGATGAATT...GAGCACCTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTCCCGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR GCA 90 bp GAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGGTGCTCAGTGGACCCGGTGTGGGAGTCTaGTCATCTATGGTTTGTTAC +
Preference number: 4 (lower is better)
Translates to: EDRVSLVGRSSAQQVLSGPGVGV*SSMVCY
Trigger: GTAACAAACCATAGATGAGCAGACTCCCACACCGGG...TCCACTGAGCACCTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR TCA 90 bp AGGATTGGGTTCGGTTCTGAAAGGTCAGGGACATTTCCTACCACAAAACAGGAAATCTGGTGGACGACGTaGACCGTCTGCACGACGGGT +
Preference number: 4 (lower is better)
Translates to: RIGFGSERSGTFPTTKQEIWWTT*TVCTTG
Trigger: ACCCGTCGTGCAGACGGTTCACGTCGTCCACCAGAT...TTCCTGTTTTGTGGTAGGAAATGTCCCTGACCTTTCAGAACCGAACCCAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR TCA 90 bp TGCCGGAAAAGGCTTTGCTCTTGTCTCCAGAAGCACCTGCTGGTCTGTCTGGATATTGGTAGCTGGTGTTaGCCTAGAGGTGCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: CRKRLCSCLQKHLLVCLDIGSWC*PRGACC
Trigger: ACAACAGGCACCTCTAGGTCAACACCAGCTACCAAT...ATCCAGACAGACCAGCAGGTGCTTCTGGAGACAAGAGCAAAGCCTTTTCCGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR TCA 90 bp GTGAGAGGCACACTTCAGTCTGGGTTCAAGATGCAGAATGGTGCCTACGGCAAAGGGACTGATGCCACGTaGGTGCCGTTTTGTGTTACA +
Preference number: 4 (lower is better)
Translates to: VRGTLQSGFKMQNGAYGKGTDAT*VPFCVT
Trigger: TGTAACACAAAACGGCACTCACGTGGCATCAGTCCC...TTTGCCGTAGGCACCATTCTGCATCTTGAACCCAGACTGAAGTGTGCCTCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR TCA 90 bp TTCCGGGCTGCCGGAAAAGGCTTTGCTCTTGTCTCCAGAAGCACCTGCTGGTCTTCAGTAGAAATGGAGTaGTGTGAAATGCCCAAGACC +
Preference number: 4 (lower is better)
Translates to: FRAAGKGFALVSRSTCWSSVEME*CEMPKT
Trigger: GGTCTTGGGCATTTCACATCACTCCATTTCTACTGA...AGACCAGCAGGTGCTTCTGGAGACAAGAGCAAAGCCTTTTCCGGCAGCCCGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR TCA 90 bp TCGCGGGAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGGTGCTCACGGTCTCAGTCACGTaGTGGTTTTGCTTTTATTTC +
Preference number: 4 (lower is better)
Translates to: SREDRVSLVGRSSAQQVLTVSVT*WFCFYF
Trigger: GAAATAAAAGCAAAACCATCACGTGACTGAGACCGT...GAGCACCTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTCCCGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR TCA 90 bp AGGATTGGGTTCGGTTCTGAAAGGTCAGGGACATTTCCTACCACAAAACAGGAAATGCCGCACACACTCTaGGTGCACCACGTGACGTGG +
Preference number: 4 (lower is better)
Translates to: RIGFGSERSGTFPTTKQEMPHTL*VHHVTW
Trigger: CCACGTCACGTGGTGCACTCAGAGTGTGTGCGGCAT...TTCCTGTTTTGTGGTAGGAAATGTCCCTGACCTTTCAGAACCGAACCCAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR TCA 90 bp CAATGTATTAGAAACTCTCATCTCTTTTCAGGCAGGTCCTCCCACGGGAATCCCAACCGAAACCACGAGTaGGAAGGGGCTCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: QCIRNSHLFSGRSSHGNPNRNHE*EGALLP
Trigger: TGGGAGCAGAGCCCCTTCTCACTCGTGGTTTCGGTT...GGGATTCCCGTGGGAGGACCTGCCTGAAAAGAGATGAGAGTTTCTAATACATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575578.1
CDS-3UTR GCA 90 bp ATACAAACATACCACGGAGAGACCTGGGATCTGAGTTTCAAAAGGGCCTGTGATGACCGGGGTGGTCTGTaGCGTCTGAATGATCCGGCT +
Preference number: 4 (lower is better)
Translates to: IQTYHGETWDLSFKRACDDRGGL*RLNDPA
Trigger: AGCCGGATCATTCAGACGGCACAGACCACCCCGGTC...ATCACAGGCCCTTTTGAAACTCAGATCCCAGGTCTCTCCGTGGTATGTTTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR GCA 90 bp CGTTGTTTCTTTGCCCCAAATGAAATCCACGGAAAGGGCCTGTGTGATTCTGAATCCACATGTCTCCGCTaGCTGGTGGGTCCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: RCFFAPNEIHGKGLCDSESTCLR*LVGPVR
Trigger: CCTCACAGGACCCACCAGGCAGCGGAGACATGTGGA...TTCAGAATCACACAGGCCCTTTCCGTGGATTTCATTTGGGGCAAAGAAACAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR GCA 90 bp CGTTGTTTCTTTGCCCCAAATGAAATCCACGGAAAGGGCCTGTGTGATTCTGAACACGCTGCGCTTTGCTaGGGTCACACACACGGTCTC +
Preference number: 4 (lower is better)
Translates to: RCFFAPNEIHGKGLCDSEHAALC*GHTHGL
Trigger: GAGACCGTGTGTGTGACCGCAGCAAAGCGCAGCGTG...TTCAGAATCACACAGGCCCTTTCCGTGGATTTCATTTGGGGCAAAGAAACAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR GCA 90 bp AAAACGTCTCCAAGGGGACATACGATGCATTTGCTTGGTGTCCCAGCCAAGCTCAAAGTGCTTGGAAGATaGAGACAGCTGCACCGAGGG +
Preference number: 4 (lower is better)
Translates to: KTSPRGHTMHLLGVPAKLKVLGR*RQLHRG
Trigger: CCCTCGGTGCAGCTGTCTGCATCTTCCAAGCACTTT...GAGCTTGGCTGGGACACCAAGCAAATGCATCGTATGTCCCCTTGGAGACGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR GCA 90 bp TCGCGGGAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGGTGCTCAAGGTATCTGTAAAGTaGTTGGAAGATGCAGACAGC +
Preference number: 4 (lower is better)
Translates to: SREDRVSLVGRSSAQQVLKVSVK*LEDADS
Trigger: GCTGTCTGCATCTTCCAAGCACTTTACAGATACCTT...GAGCACCTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTCCCGCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR GCA 90 bp AAAACGTCTCCAAGGGGACATACGATGCATTTGCTTGGTGTCCCAGCCAAGCTCCAGCTCAGCAACCCTTaGTGTGCTCAAGTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: KTSPRGHTMHLLGVPAKLQLSNP*CAQVLG
Trigger: CCCAAGAACTTGAGCACAGCAAGGGTTGCTGAGCTG...GAGCTTGGCTGGGACACCAAGCAAATGCATCGTATGTCCCCTTGGAGACGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR GCA 90 bp GTCCTCCCACGGGAATCCCATGACGGCCGACTCCACGACCACTTCCCCAGCATGTCGAAATGCAAACATTaGCTCAGACAAAAGCTAAAA +
Preference number: 4 (lower is better)
Translates to: VLPRESHDGRLHDHFPSMSKCKH*LRQKLK
Trigger: TTTTAGCTTTTGTCTGAGGCAATGTTTGCATTTCGA...CATGCTGGGGAAGTGGTCGTGGAGTCGGCCGTCATGGGATTCCCGTGGGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575578.1
CDS-3UTR CCA 90 bp AGCTTACACGGGAAAGTCTACCCCCGACTCCTTCTGGATAGTAACATACACAGCGTGGGCCATGGTGTCTaGAATGTTGATGGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: SLHGKVYPRLLLDSNIHSVGHGV*NVDGQG
Trigger: CCCCTGACCATCAACATTCCAGACACCATGGCCCAC...GCTGTGTATGTTACTATCCAGAAGGAGTCGGGGGTAGACTTTCCCGTGTAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CCA 90 bp AGGATTGGGTTCGGTTCTGAAAGGTCAGGGACATTTCCTACCACAAAACAGGAAAGTGTACGTGTTCGCTaGGGCCAGTCCGGCCACACT +
Preference number: 4 (lower is better)
Translates to: RIGFGSERSGTFPTTKQESVRVR*GQSGHT
Trigger: AGTGTGGCCGGACTGGCCCCAGCGAACACGTACACT...TTCCTGTTTTGTGGTAGGAAATGTCCCTGACCTTTCAGAACCGAACCCAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CCA 90 bp CGTTGTTTCTTTGCCCCAAATGAAATCCACGGAAAGGGCCTGTGTGATTCTGAAGTTCCTTCCCGGCACTaGCTCGTCCCTGGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: RCFFAPNEIHGKGLCDSEVPSRH*LVPGFS
Trigger: TGAGAACCCAGGGACGAGCCAGTGCCGGGAAGGAAC...TTCAGAATCACACAGGCCCTTTCCGTGGATTTCATTTGGGGCAAAGAAACAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CCA 90 bp GAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGGTGCTCAGTGGATACCACGGAGAGACCTaGGATCTGAGTTTCAAAAGG +
Preference number: 4 (lower is better)
Translates to: EDRVSLVGRSSAQQVLSGYHGET*DLSFKR
Trigger: CCTTTTGAAACTCAGATCCCAGGTCTCTCCGTGGTA...TCCACTGAGCACCTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CCA 90 bp GAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGGTGCTCAGTGGAACCCCCGACTCCTTCTaGATAGTAACATACACAGCT +
Preference number: 4 (lower is better)
Translates to: EDRVSLVGRSSAQQVLSGTPDSF*IVTYTA
Trigger: AGCTGTGTATGTTACTATCCAGAAGGAGTCGGGGGT...TCCACTGAGCACCTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CCA 90 bp TTCCAGGCCACACCCAGGAAATCTACAAGAGGCGAGAGTATTTTTCCCTCTCAATTACCATTGTTCACCTaGCCGTGGACCGCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: FQATPRKSTRGESIFPSQLPLFT*PWTAVG
Trigger: CCCCACTGCGGTCCACGGCCAGGTGAACAATGGTAA...TTGAGAGGGAAAAATACTCTCGCCTCTTGTAGATTTCCTGGGTGTGGCCTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575578.1
CDS-3UTR TCA 90 bp AGCTTACACGGGAAAGTCTACCCCCGACTCCTTCTGGATAGTAACATACACAGCGAGAGACCTGGGATCTaGGTTTCAAAAGGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: SLHGKVYPRLLLDSNIHSERPGI*VSKGPV
Trigger: CACAGGCCCTTTTGAAACTCAGATCCCAGGTCTCTC...GCTGTGTATGTTACTATCCAGAAGGAGTCGGGGGTAGACTTTCCCGTGTAAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR TCA 90 bp GCATTTGCTTGGTGTCCCAGCCAAGCTCCCCACCGGCGACCTCACTGTTCCTTATATTTCTTAAACGGCTaGGTGATAATCCAGCTAGTG +
Preference number: 4 (lower is better)
Translates to: AFAWCPSQAPHRRPHCSLYFLNG*VIIQLV
Trigger: CACTAGCTGGATTATCACTCAGCCGTTTAAGAAATA...TAAGGAACAGTGAGGTCGCCGGTGGGGAGCTTGGCTGGGACACCAAGCAAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR TCA 90 bp GTGAGAGGCACACTTCAGTCTGGGTTCAAGATGCAGAATGGTGCCTACGGCAAATCCAGACCTATCATGTaGAGTCCACGTTCCAGGATC +
Preference number: 4 (lower is better)
Translates to: VRGTLQSGFKMQNGAYGKSRPIM*SPRSRI
Trigger: GATCCTGGAACGTGGACTTCACATGATAGGTCTGGA...TTTGCCGTAGGCACCATTCTGCATCTTGAACCCAGACTGAAGTGTGCCTCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR TCA 90 bp CGTGTGCACCTTCCATCTGTGAGAGGCACACTTCAGTCTGGGTTCAAGATGCAGTCACAGCAGACTTCCTaGAAAGCAGACACTGAGGAA +
Preference number: 4 (lower is better)
Translates to: RVHLPSVRGTLQSGFKMQSQQTS*KADTEE
Trigger: TTCCTCAGTGTCTGCTTTTCAGGAAGTCTGCTGTGA...CTGCATCTTGAACCCAGACTGAAGTGTGCCTCTCACAGATGGAAGGTGCACACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR TCA 90 bp GGACTGAGCTTACACGGGAAAGTCTACCCCCGACTCCTTCTGGATAGTAACATAATTGTTCCTAGTCCCTaGGGAGCTCAGAAGTTGGGC +
Preference number: 4 (lower is better)
Translates to: GLSLHGKVYPRLLLDSNIIVPSP*GAQKLG
Trigger: GCCCAACTTCTGAGCTCCTCAGGGACTAGGAACAAT...TATGTTACTATCCAGAAGGAGTCGGGGGTAGACTTTCCCGTGTAAGCTCAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR GCA 90 bp GAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGGTGCTCAGTGGACTGATGCCACGTGAGTaGCGTTTTGTGTTACAGTTT +
Preference number: 4 (lower is better)
Translates to: EDRVSLVGRSSAQQVLSGLMPRE*RFVLQF
Trigger: AAACTGTAACACAAAACGGCACTCACGTGGCATCAG...TCCACTGAGCACCTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR GCA 90 bp TGCTGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGAGTTGATATCGTTAAAGCTGATGCCACGTGAGTaGCGTTTTGTGTTACAGTTT +
Preference number: 4 (lower is better)
Translates to: CWREAASPFGTTELISLKLMPRE*RFVLQF
Trigger: AAACTGTAACACAAAACGGCACTCACGTGGCATCAG...CTTTAACGATATCAACTCTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR GCA 90 bp CCACAGCGTCCGTCCACCTGTCCACGCGAGCCACATGCTGAAATGGAGGTGGATATAATCCAGCTAGTGTaGAGTCATTTCATACCTTTC +
Preference number: 4 (lower is better)
Translates to: PQRPSTCPREPHAEMEVDIIQLV*SHFIPF
Trigger: GAAAGGTATGAAATGACTGCACACTAGCTGGATTAT...ATCCACCTCCATTTCAGCATGTGGCTCGCGTGGACAGGTGGACGGACGCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR GCA 90 bp TTCCTACCACAAAACAGGAAATGCCCCAGACGTGCCCTGCAGGACGTGGCTCGGAGTAACATACACAGCTaGATAAAAACGTCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: FLPQNRKCPRRALQDVARSNIHS*IKTSPR
Trigger: CCTTGGAGACGTTTTTATGCAGCTGTGTATGTTACT...CCGAGCCACGTCCTGCAGGGCACGTCTGGGGCATTTCCTGTTTTGTGGTAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR GCA 90 bp AAAACGTCTCCAAGGGGACATACGATGCATTTGCTTGGTGTCCCAGCCAAGCTCAGTCTGGGTTCAAGATaGAGAATGGTGCCTACGGCA +
Preference number: 4 (lower is better)
Translates to: KTSPRGHTMHLLGVPAKLSLGSR*RMVPTA
Trigger: TGCCGTAGGCACCATTCTGCATCTTGAACCCAGACT...GAGCTTGGCTGGGACACCAAGCAAATGCATCGTATGTCCCCTTGGAGACGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CCA 90 bp CGTTGTTTCTTTGCCCCAAATGAAATCCACGGAAAGGGCCTGTGTGATTCTGAATCCAGAAGCACCTGCTaGTCTGTCTGGATGGGGCCT +
Preference number: 4 (lower is better)
Translates to: RCFFAPNEIHGKGLCDSESRSTC*SVWMGP
Trigger: AGGCCCCATCCAGACAGACCAGCAGGTGCTTCTGGA...TTCAGAATCACACAGGCCCTTTCCGTGGATTTCATTTGGGGCAAAGAAACAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR GCA 90 bp CGTTGTTTCTTTGCCCCAAATGAAATCCACGGAAAGGGCCTGTGTGATTCTGAAGACTCAGACGCCTCCTaGTTCTCTCTCTTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: RCFFAPNEIHGKGLCDSEDSDAS*FSLFSL
Trigger: CAGCGAGAAGAGAGAGAAGCAGGAGGCGTCTGAGTC...TTCAGAATCACACAGGCCCTTTCCGTGGATTTCATTTGGGGCAAAGAAACAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR GCA 90 bp CGTTGTTTCTTTGCCCCAAATGAAATCCACGGAAAGGGCCTGTGTGATTCTGAAAGCAACCGAGGATCATaGCGCACACACTCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: RCFFAPNEIHGKGLCDSESNRGS*RTHSEC
Trigger: GCACTCAGAGTGTGTGCGGCATGATCCTCGGTTGCT...TTCAGAATCACACAGGCCCTTTCCGTGGATTTCATTTGGGGCAAAGAAACAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CCA 90 bp CGTTGTTTCTTTGCCCCAAATGAAATCCACGGAAAGGGCCTGTGTGATTCTGAAGTGGGCCATGGTGTCTaGAATGTTGATGGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: RCFFAPNEIHGKGLCDSEVGHGV*NVDGQG
Trigger: CCCCTGACCATCAACATTCCAGACACCATGGCCCAC...TTCAGAATCACACAGGCCCTTTCCGTGGATTTCATTTGGGGCAAAGAAACAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CCA 90 bp CGTTGTTTCTTTGCCCCAAATGAAATCCACGGAAAGGGCCTGTGTGATTCTGAATTAAGACTGGCTGACTaGACAGAGGTGACCCTGGGG +
Preference number: 4 (lower is better)
Translates to: RCFFAPNEIHGKGLCDSELRLAD*TEVTLG
Trigger: CCCCAGGGTCACCTCTGTCCAGTCAGCCAGTCTTAA...TTCAGAATCACACAGGCCCTTTCCGTGGATTTCATTTGGGGCAAAGAAACAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CCA 90 bp AAATGGAGTGATGTGAAATGCCCAAGACCCCATTATTTTGTAAAGAAAGGACACTGGCAGTGCCGAGCGTaGCGTGGCCAATGGCGGGAA +
Preference number: 4 (lower is better)
Translates to: KWSDVKCPRPHYFVKKGHWQCRA*RGQWRE
Trigger: TTCCCGCCATTGGCCACGCCACGCTCGGCACTGCCA...GTGTCCTTTCTTTACAAAATAATGGGGTCTTGGGCATTTCACATCACTCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CCA 90 bp CCAGGAAATCTACAAGAGGCGAGAGTATTTTTCCCTCTCAATGTATTAGAAACTGGCCGTGGACCGCAGTaGGGACTGATGCCACGTGAG +
Preference number: 4 (lower is better)
Translates to: PGNLQEARVFFPLNVLETGRGPQ*GLMPRE
Trigger: CTCACGTGGCATCAGTCCCCACTGCGGTCCACGGCC...AGTTTCTAATACATTGAGAGGGAAAAATACTCTCGCCTCTTGTAGATTTCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575578.1
3UTR CAA 72 bp CTGTCCTCATTTTCCGTAGAGGAGTCAGCCTCAGGATaGGGTTCGGTTCTGAAAGGTCAGGGACATTTCCTA +
Preference number: 4 (lower is better)
Translates to: LSSFSVEESASG*GSVLKGQGHFL
Trigger: TAGGAAATGTCCCTGACCTTTCAGAACCGAACCCAATCCTGAGGCTGACTCCTCTACGGAAAATGAGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR TCA 90 bp AGGATTGGGTTCGGTTCTGAAAGGTCAGGGACATTTCCTACCACAAAACAGGAATGGTGTCTGGAATGTTaGTGGTCAGGGGCGAGATGT +
Preference number: 4 (lower is better)
Translates to: RIGFGSERSGTFPTTKQEWCLEC*WSGARC
Trigger: ACATCTCGCCCCTGACCATCAACATTCCAGACACCA...TTCCTGTTTTGTGGTAGGAAATGTCCCTGACCTTTCAGAACCGAACCCAATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR TCA 90 bp CGTTGTTTCTTTGCCCCAAATGAAATCCACGGAAAGGGCCTGTGTGATTCTGAAGTGATTAAGACTGGCTaGCTGGACAGAGGTGACCCT +
Preference number: 4 (lower is better)
Translates to: RCFFAPNEIHGKGLCDSEVIKTG*LDRGDP
Trigger: AGGGTCACCTCTGTCCAGTCAGCCAGTCTTAATCAC...TTCAGAATCACACAGGCCCTTTCCGTGGATTTCATTTGGGGCAAAGAAACAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR TCA 90 bp GGAAATCTACAAGAGGCGAGAGTATTTTTCCCTCTCAATGTATTAGAAACTCTCGACCGCAGTGGGGACTaGTGCCACGTGAGTGCCGTT +
Preference number: 4 (lower is better)
Translates to: GNLQEARVFFPLNVLETLDRSGD*CHVSAV
Trigger: AACGGCACTCACGTGGCATCAGTCCCCACTGCGGTC...GAGAGTTTCTAATACATTGAGAGGGAAAAATACTCTCGCCTCTTGTAGATTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575578.1
CDS-3UTR TCA 90 bp TGCTGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGAGTTGATATCGTTAAAGGGTTTTGTTCAAGTGTaGCTTCTGTCTTTAAGGAGT +
Preference number: 4 (lower is better)
Translates to: CWREAASPFGTTELISLKGFVQV*LLSLRS
Trigger: ACTCCTTAAAGACAGAAGTCACACTTGAACAAAACC...CTTTAACGATATCAACTCTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR GCA 90 bp TTCTCATCCCAGGTTCCGGGCTGCCGGAAAAGGCTTTGCTCTTGTCTCCAGAAGTGGAGTGATGTGAAATaGCCAAGACCCCATTATTTT +
Preference number: 4 (lower is better)
Translates to: FSSQVPGCRKRLCSCLQKWSDVK*PRPHYF
Trigger: AAAATAATGGGGTCTTGGGCATTTCACATCACTCCA...CTTCTGGAGACAAGAGCAAAGCCTTTTCCGGCAGCCCGGAACCTGGGATGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR CCA 90 bp CCACACCCAGGAAATCTACAAGAGGCGAGAGTATTTTTCCCTCTCAATGTATTATGGTCTCCATTCTCCTaGGCCTCTGCCTTAGGAGGG +
Preference number: 4 (lower is better)
Translates to: PHPGNLQEARVFFPLNVLWSPFS*ASALGG
Trigger: CCCTCCTAAGGCAGAGGCCCAGGAGAATGGAGACCA...TAATACATTGAGAGGGAAAAATACTCTCGCCTCTTGTAGATTTCCTGGGTGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575578.1
CDS-3UTR TCA 90 bp CCAGGAAATCTACAAGAGGCGAGAGTATTTTTCCCTCTCAATGTATTAGAAACTTCTGTGCCGTCTGAATaGTCCGGCTGGCAGTGCCGA +
Preference number: 4 (lower is better)
Translates to: PGNLQEARVFFPLNVLETSVPSE*SGWQCR
Trigger: TCGGCACTGCCAGCCGGATCATTCAGACGGCACAGA...AGTTTCTAATACATTGAGAGGGAAAAATACTCTCGCCTCTTGTAGATTTCCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575578.1
CDS-3UTR TCA 90 bp GGACTGAGCTTACACGGGAAAGTCTACCCCCGACTCCTTCTGGATAGTAACATATCAGTAGAAATGGAGTaGTGTGAAATGCCCAAGACC +
Preference number: 4 (lower is better)
Translates to: GLSLHGKVYPRLLLDSNISVEME*CEMPKT
Trigger: GGTCTTGGGCATTTCACATCACTCCATTTCTACTGA...TATGTTACTATCCAGAAGGAGTCGGGGGTAGACTTTCCCGTGTAAGCTCAGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR TCA 90 bp TGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGAGTTGATATCGTTAAAGAAACATTTTCCTTACCTGTaGTCCCAACAGAAACAGATC +
Preference number: 4 (lower is better)
Translates to: WREAASPFGTTELISLKKHFPYL*SQQKQI
Trigger: GATCTGTTTCTGTTGGGATCACAGGTAAGGAAAATG...TTTCTTTAACGATATCAACTCTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR GCA 90 bp AAATGGAGTGATGTGAAATGCCCAAGACCCCATTATTTTGTAAAGAAAGGACACCTTTTCCCTTACGGCTaGCGGTGGCGTGTCCACGCT +
Preference number: 4 (lower is better)
Translates to: KWSDVKCPRPHYFVKKGHLFPYG*RWRVHA
Trigger: AGCGTGGACACGCCACCGGCAGCCGTAAGGGAAAAG...GTGTCCTTTCTTTACAAAATAATGGGGTCTTGGGCATTTCACATCACTCCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR TCA 90 bp AAATGGAGTGATGTGAAATGCCCAAGACCCCATTATTTTGTAAAGAAAGGACACTTAAGTGCAGCTCGGTaGGTCCCGGCAGTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: KWSDVKCPRPHYFVKKGHLSAAR*VPAVPS
Trigger: GGAAGGAACTGCCGGGACTCACCGAGCTGCACTTAA...GTGTCCTTTCTTTACAAAATAATGGGGTCTTGGGCATTTCACATCACTCCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR TCA 90 bp AAATGGAGTGATGTGAAATGCCCAAGACCCCATTATTTTGTAAAGAAAGGACACAAATCCCGTTCAGGGTaGGCTGTTTGTCGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: KWSDVKCPRPHYFVKKGHKSRSG*AVCREP
Trigger: TGGCTCCCGACAAACAGCTCACCCTGAACGGGATTT...GTGTCCTTTCTTTACAAAATAATGGGGTCTTGGGCATTTCACATCACTCCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR GCA 90 bp GTGAGAGGCACACTTCAGTCTGGGTTCAAGATGCAGAATGGTGCCTACGGCAAATCTATGGTTTGTTACTaGTCTCGCTTCGATATTCTT +
Preference number: 4 (lower is better)
Translates to: VRGTLQSGFKMQNGAYGKSMVCY*SRFDIL
Trigger: AAGAATATCGAAGCGAGAGCAGTAACAAACCATAGA...TTTGCCGTAGGCACCATTCTGCATCTTGAACCCAGACTGAAGTGTGCCTCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CCA 90 bp AAATGGAGTGATGTGAAATGCCCAAGACCCCATTATTTTGTAAAGAAAGGACACTTAAGACTGGCTGACTaGACAGAGGTGACCCTGGGG +
Preference number: 4 (lower is better)
Translates to: KWSDVKCPRPHYFVKKGHLRLAD*TEVTLG
Trigger: CCCCAGGGTCACCTCTGTCCAGTCAGCCAGTCTTAA...GTGTCCTTTCTTTACAAAATAATGGGGTCTTGGGCATTTCACATCACTCCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CCA 90 bp AAATGGAGTGATGTGAAATGCCCAAGACCCCATTATTTTGTAAAGAAAGGACACCCAGCAGGTGCTCAGTaGAGACACCGTCTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: KWSDVKCPRPHYFVKKGHPAGAQ*RHRLPN
Trigger: ATTTGGGAGACGGTGTCTCCACTGAGCACCTGCTGG...GTGTCCTTTCTTTACAAAATAATGGGGTCTTGGGCATTTCACATCACTCCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CCA 90 bp CGTTGTTTCTTTGCCCCAAATGAAATCCACGGAAAGGGCCTGTGTGATTCTGAAGAGTCTGCTCATCTATaGTTTGTTACTGCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: RCFFAPNEIHGKGLCDSEESAHL*FVTALA
Trigger: AGCGAGAGCAGTAACAAACCATAGATGAGCAGACTC...TTCAGAATCACACAGGCCCTTTCCGTGGATTTCATTTGGGGCAAAGAAACAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
3UTR CAA 72 bp TGCGGTCACACACACGGTCTCAGTCACGTGATGGTTTaGCTTTTATTTCTTAAACGGCTGAGTGATAATCCA +
Preference number: 4 (lower is better)
Translates to: CGHTHGLSHVMV*LLFLKRLSDNP
Trigger: TGGATTATCACTCAGCCGTTTAAGAAATAAAAGCAAAACCATCACGTGACTGAGACCGTGTGTGTGACCGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR TCA 90 bp AAATGGAGTGATGTGAAATGCCCAAGACCCCATTATTTTGTAAAGAAAGGACACGAGATTGTGGCGAATTaGATTCTGCCAGCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: KWSDVKCPRPHYFVKKGHEIVAN*ILPALV
Trigger: GACAAGGGCTGGCAGAATTCAATTCGCCACAATCTC...GTGTCCTTTCTTTACAAAATAATGGGGTCTTGGGCATTTCACATCACTCCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR TCA 90 bp AAATGGAGTGATGTGAAATGCCCAAGACCCCATTATTTTGTAAAGAAAGGACACGATTGGGTTCGGTTCTaGAAGGTCAGGGACATTTCC +
Preference number: 4 (lower is better)
Translates to: KWSDVKCPRPHYFVKKGHDWVRF*KVRDIS
Trigger: GGAAATGTCCCTGACCTTTCAGAACCGAACCCAATC...GTGTCCTTTCTTTACAAAATAATGGGGTCTTGGGCATTTCACATCACTCCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR GCA 90 bp AAATGGAGTGATGTGAAATGCCCAAGACCCCATTATTTTGTAAAGAAAGGACACTGCGGATGCGTGTGTTaGCAACATGTGCAAAGGACT +
Preference number: 4 (lower is better)
Translates to: KWSDVKCPRPHYFVKKGHCGCVC*QHVQRT
Trigger: AGTCCTTTGCACATGTTGGCAACACACGCATCCGCA...GTGTCCTTTCTTTACAAAATAATGGGGTCTTGGGCATTTCACATCACTCCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS GCA 90 bp ACAGGCCCTGGCGTGGGCAATACCCGCCTCCTACTCGCAGTCCCCTaGAGGGACGCTGGCTGGTCAGAGACCGACCTCCGCCCCCAGGTC +
Preference number: 5 (lower is better)
Translates to: TGPGVGNTRLLLAVP*RDAGWSETDLRPQV
Trigger: GACCTGGGGGCGGAGGTCGGTCTCTGACCAGCCAGCGTCCCTGCAGGGGACTGCGAGTAGGAGGCGGGTATTGCCCACGCCAGGGCCTGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS-3UTR CAA 90 bp GGCCCTGCACCCCCGAGTGCTGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGCACCGTTGTGGCGCTTaGTGGGCAGGGAGGCCGATG +
Preference number: 5 (lower is better)
Translates to: GPAPPSAGGRPRLLLAPQHRCGA*WAGRPM
Trigger: CATCGGCCTCCCTGCCCACAAAGCGCCACAACGGTG...CTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCAGCACTCGGGGGTGCAGGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CAA 90 bp GCTGACGCCCTCTCCCCATGTGCACGGCCCTCGGCCCTCGGCCGGCACACTCGGTCGCCGTCTTCTGTCTaGATCCGCTTCAGCTCCGGC +
Preference number: 5 (lower is better)
Translates to: ADALSPCARPSALGRHTRSPSSV*IRFSSG
Trigger: GCCGGAGCTGAAGCGGATCAAGACAGAAGACGGCGA...CCGAGTGTGCCGGCCGAGGGCCGAGGGCCGTGCACATGGGGAGAGGGCGTCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS CCA 90 bp GGCAATACCCGCCTCCTACTCGCAGTCCCCTGCAGGGACGCTGGCTaGTCAGAGACCGACCTCCGCCCCCAGGTCTTCCCTAGCGGAGCG +
Preference number: 5 (lower is better)
Translates to: GNTRLLLAVPCRDAG*SETDLRPQVFPSGA
Trigger: CGCTCCGCTAGGGAAGACCTGGGGGCGGAGGTCGGTCTCTGACCAGCCAGCGTCCCTGCAGGGGACTGCGAGTAGGAGGCGGGTATTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS CCA 90 bp TGGTTGAGGCAGACAGGAGATGGCCCTGCTGGCTCGGCGAAGGAGTaGCTGCCGCTCGCTGCTCTCCCTCATGCGGAGGCCCTGCCCTCG +
Preference number: 5 (lower is better)
Translates to: WLRQTGDGPAGSAKE*LPLAALPHAEALPS
Trigger: CGAGGGCAGGGCCTCCGCATGAGGGAGAGCAGCGAGCGGCAGCCACTCCTTCGCCGAGCCAGCAGGGCCATCTCCTGTCTGCCTCAACCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS GCA 90 bp CGCCCCCAGGTCTTCCCTAGCGGAGCGGATGTGAGTCCGGCCAGGTaGGTGGTCAGCTCCTCATGGCCAGATAGCCGGGGCAGCCACGAA +
Preference number: 5 (lower is better)
Translates to: RPQVFPSGADVSPAR*VVSSSWPDSRGSHE
Trigger: TTCGTGGCTGCCCCGGCTATCTGGCCATGAGGAGCTGACCACGCACCTGGCCGGACTCACATCCGCTCCGCTAGGGAAGACCTGGGGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS CCA 90 bp CGTGTTCGCTGGGGCCAGTCCGGCCACACTGGTGACCGACACCGCTaGGATCTGGTGGACGACGTGAACCGTCTGCACGACGGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: RVRWGQSGHTGDRHR*DLVDDVNRLHDGWL
Trigger: CAGCCACCCGTCGTGCAGACGGTTCACGTCGTCCACCAGATCCCAGCGGTGTCGGTCACCAGTGTGGCCGGACTGGCCCCAGCGAACACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS CCA 90 bp AGGCCAAGGGGCCCTCCTCGTCCGCGTGGCCTGATCCCGCTGCTCTaGGGCTGTCAATCCAGTGGCGGCAGCTGCTGCTCTGCCTGGAAA +
Preference number: 5 (lower is better)
Translates to: RPRGPPRPRGLIPLL*GCQSSGGSCCSAWK
Trigger: TTTCCAGGCAGAGCAGCAGCTGCCGCCACTGGATTGACAGCCCCAGAGCAGCGGGATCAGGCCACGCGGACGAGGAGGGCCCCTTGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529652.1
CDS TCA 90 bp CCGGCCACACTGGTGACCGACACCGCTGGGATCTGGTGGACGACGTaGACCGTCTGCACGACGGGTGGCTGGGAGGTCGAGGTGGTCACT +
Preference number: 5 (lower is better)
Translates to: PATLVTDTAGIWWTT*TVCTTGGWEVEVVT
Trigger: AGTGACCACCTCGACCTCCCAGCCACCCGTCGTGCAGACGGTTCACGTCGTCCACCAGATCCCAGCGGTGTCGGTCACCAGTGTGGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS TCA 90 bp CAGAGACCGACCTCCGCCCCCAGGTCTTCCCTAGCGGAGCGGATGTaGGTCCGGCCAGGTGCGTGGTCAGCTCCTCATGGCCAGATAGCC +
Preference number: 5 (lower is better)
Translates to: QRPTSAPRSSLAERM*VRPGAWSAPHGQIA
Trigger: GGCTATCTGGCCATGAGGAGCTGACCACGCACCTGGCCGGACTCACATCCGCTCCGCTAGGGAAGACCTGGGGGCGGAGGTCGGTCTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS GCA 90 bp CCGCCGCCTTGGCTCTGTTTCTCTGGGGCACCCTCACCTACCAGGTaGCATCAGGACCCCACCATCTCCAGCTTCCGGCACAGGCCAGTC +
Preference number: 5 (lower is better)
Translates to: PPPWLCFSGAPSPTR*HQDPTISSFRHRPV
Trigger: GACTGGCCTGTGCCGGAAGCTGGAGATGGTGGGGTCCTGATGGCACCTGGTAGGTGAGGGTGCCCCAGAGAAACAGAGCCAAGGCGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS CCA 90 bp CACCGCTGGGATCTGGTGGACGACGTGAACCGTCTGCACGACGGGTaGCTGGGAGGTCGAGGTGGTCACTGGGGTGGCCACAGTGTAGGT +
Preference number: 5 (lower is better)
Translates to: HRWDLVDDVNRLHDG*LGGRGGHWGGHSVG
Trigger: ACCTACACTGTGGCCACCCCAGTGACCACCTCGACCTCCCAGCCACCCGTCGTGCAGACGGTTCACGTCGTCCACCAGATCCCAGCGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS CCA 90 bp TCGTCCGCGTGGCCTGATCCCGCTGCTCTGGGGCTGTCAATCCAGTaGCGGCAGCTGCTGCTCTGCCTGGAAAGGCTCCGCTTTGAGGCT +
Preference number: 5 (lower is better)
Translates to: SSAWPDPAALGLSIQ*RQLLLCLERLRFEA
Trigger: AGCCTCAAAGCGGAGCCTTTCCAGGCAGAGCAGCAGCTGCCGCCACTGGATTGACAGCCCCAGAGCAGCGGGATCAGGCCACGCGGACGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529652.1
CDS CCA 90 bp AGCGGAGCGGATGTGAGTCCGGCCAGGTGCGTGGTCAGCTCCTCATaGCCAGATAGCCGGGGCAGCCACGAAGAGCGGGAGTCAACACTG +
Preference number: 5 (lower is better)
Translates to: SGADVSPARCVVSSS*PDSRGSHEERESTL
Trigger: CAGTGTTGACTCCCGCTCTTCGTGGCTGCCCCGGCTATCTGGCCATGAGGAGCTGACCACGCACCTGGCCGGACTCACATCCGCTCCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS TCA 90 bp GTACTATGGTCACCGTCTGGACCGGGGTGGTCTGTGCCGTCTGAATaGTCCGGCTGGCAGTGCCGAGCGTGGCGTGGCCAATGGCGGGAA +
Preference number: 5 (lower is better)
Translates to: VLWSPSGPGWSVPSE*SGWQCRAWRGQWRE
Trigger: TTCCCGCCATTGGCCACGCCACGCTCGGCACTGCCAGCCGGATCATTCAGACGGCACAGACCACCCCGGTCCAGACGGTGACCATAGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335255.10
ENST00000473637.6
ENST00000575578.1
CDS GCA 90 bp AGGTGCCTGTTGTACTATGGTCACCGTCTGGACCGGGGTGGTCTGTaGCGTCTGAATGATCCGGCTGGCAGTGCCGAGCGTGGCGTGGCC +
Preference number: 5 (lower is better)
Translates to: RCLLYYGHRLDRGGL*RLNDPAGSAERGVA
Trigger: GGCCACGCCACGCTCGGCACTGCCAGCCGGATCATTCAGACGGCACAGACCACCCCGGTCCAGACGGTGACCATAGTACAACAGGCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335255.10
ENST00000473637.6
ENST00000575578.1
CDS GCA 90 bp GAGCCAGAAGGCTCGGAAGGCCCACACTCTCCCAGGTATGTGGCCTaGAGGCGTGGGGCTATAGCCGTCCAGCCAGCTGATCCTGGCACA +
Preference number: 5 (lower is better)
Translates to: EPEGSEGPHSPRYVA*RRGAIAVQPADPGT
Trigger: TGTGCCAGGATCAGCTGGCTGGACGGCTATAGCCCCACGCCTGCAGGCCACATACCTGGGAGAGTGTGGGCCTTCCGAGCCTTCTGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529652.1
ENST00000571989.1
CDS GCA 90 bp CTGGTCACCGTTGTGGCGCTTTGTGGGCAGGGAGGCCGATGCGGATaGGTGTGTTGCCAACATGTGCAAAGGACTCGCCGCGGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: LVTVVALCGQGGRCG*VCCQHVQRTRRGRC
Trigger: GCACCTGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACACGCATCCGCATCGGCCTCCCTGCCCACAAAGCGCCACAACGGTGACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529652.1
CDS CCA 90 bp AGGCTGAGTCCAGTAGTGGTTGAGGCAGACAGGAGATGGCCCTGCTaGCTCGGCGAAGGAGTGGCTGCCGCTCGCTGCTCTCCCTCATGC +
Preference number: 5 (lower is better)
Translates to: RLSPVVVEADRRWPC*LGEGVAAARCSPSC
Trigger: GCATGAGGGAGAGCAGCGAGCGGCAGCCACTCCTTCGCCGAGCCAGCAGGGCCATCTCCTGTCTGCCTCAACCACTACTGGACTCAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS-3UTR CAA 90 bp GGCCCTGCACCCCCGAGTGCTGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGTTCAGGGTGAGCTGTTaGTCGGGAGCCATCGTAATC +
Preference number: 5 (lower is better)
Translates to: GPAPPSAGGRPRLLLAPQFRVSC*SGAIVI
Trigger: GATTACGATGGCTCCCGACAAACAGCTCACCCTGAA...CTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCAGCACTCGGGGGTGCAGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS TCA 90 bp CAGAGACAGTGTACGTGTTCGCTGGGGCCAGTCCGGCCACACTGGTaGCCGACACCGCTGGGATCTGGTGGACGACGTGAACCGTCTGCA +
Preference number: 5 (lower is better)
Translates to: QRQCTCSLGPVRPHW*PTPLGSGGRREPSA
Trigger: TGCAGACGGTTCACGTCGTCCACCAGATCCCAGCGGTGTCGGTCACCAGTGTGGCCGGACTGGCCCCAGCGAACACGTACACTGTCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS TCA 90 bp TGTTGTACTATGGTCACCGTCTGGACCGGGGTGGTCTGTGCCGTCTaGATGATCCGGCTGGCAGTGCCGAGCGTGGCGTGGCCAATGGCG +
Preference number: 5 (lower is better)
Translates to: CCTMVTVWTGVVCAV*MIRLAVPSVAWPMA
Trigger: CGCCATTGGCCACGCCACGCTCGGCACTGCCAGCCGGATCATTCAGACGGCACAGACCACCCCGGTCCAGACGGTGACCATAGTACAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335255.10
ENST00000473637.6
ENST00000575578.1
CDS GCA 90 bp GTTGTGGCGCTTTGTGGGCAGGGAGGCCGATGCGGATGCGTGTGTTaGCAACATGTGCAAAGGACTCGCCGCGGCAGGTGCCATCAGGAC +
Preference number: 5 (lower is better)
Translates to: VVALCGQGGRCGCVC*QHVQRTRRGRCHQD
Trigger: GTCCTGATGGCACCTGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACACGCATCCGCATCGGCCTCCCTGCCCACAAAGCGCCACAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529652.1
CDS GCA 90 bp CCCGGTTCCTGGAGTCTAGGACTACCTCTTGTCTCCCCAGCACCCTaGCCTTCCCTTCACCTGGTGTCCACAGTGGGCGGGATTGCCTGC +
Preference number: 5 (lower is better)
Translates to: PGSWSLGLPLVSPAP*PSLHLVSTVGGIAC
Trigger: GCAGGCAATCCCGCCCACTGTGGACACCAGGTGAAGGGAAGGGCAGGGTGCTGGGGAGACAAGAGGTAGTCCTAGACTCCAGGAACCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574694.1
CDS GCA 90 bp GTTGTGGCGCTTTGTGGGCAGGGAGGCCGATGCGGATGCGTGTGTTaGCAACATGTGCAAAGGACTCGCCGCGGCCCAAATCTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: VVALCGQGGRCGCVC*QHVQRTRRGPNLAA
Trigger: GGCAGCCAGATTTGGGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACACGCATCCGCATCGGCCTCCCTGCCCACAAAGCGCCACAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571989.1
CDS GCA 90 bp AGGGTGGGAGCAGGAACACACCCCTGGGAGGCCCCAAAGCAGCTGTaGAGCAACCACTTCAGGCTGTCCCAGGAGGCTCAGAGCAGACAC +
Preference number: 5 (lower is better)
Translates to: RVGAGTHPWEAPKQL*SNHFRLSQEAQSRH
Trigger: GTGTCTGCTCTGAGCCTCCTGGGACAGCCTGAAGTGGTTGCTGCACAGCTGCTTTGGGGCCTCCCAGGGGTGTGTTCCTGCTCCCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS GCA 90 bp GAAAGGCTGAGTCCAGTAGTGGTTGAGGCAGACAGGAGATGGCCCTaGTGGCTCGGCGAAGGAGTGGCTGCCGCTCGCTGCTCTCCCTCA +
Preference number: 5 (lower is better)
Translates to: ERLSPVVVEADRRWP*WLGEGVAAARCSPS
Trigger: TGAGGGAGAGCAGCGAGCGGCAGCCACTCCTTCGCCGAGCCAGCAGGGCCATCTCCTGTCTGCCTCAACCACTACTGGACTCAGCCTTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS CCA 90 bp CTCTGCAAGGGTCCTTGTGAGGGACATGGGACCGTAATTCCTCTGTaGGGCCGGGAGCCAGAAGGCTCGGAAGGCCCACACTCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: LCKGPCEGHGTVIPL*GREPEGSEGPHSPR
Trigger: CCTGGGAGAGTGTGGGCCTTCCGAGCCTTCTGGCTCCCGGCCCCACAGAGGAATTACGGTCCCATGTCCCTCACAAGGACCCTTGCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529652.1
ENST00000571989.1
CDS CCA 90 bp CGGTCCACCCTGCAGATGCTGAGCTTGGCAGGCCCCACAACAGAGTaGGCAGATTCCACAGAATCTGTCTCCAGGCCGCCGCCTTGGCTC +
Preference number: 5 (lower is better)
Translates to: RSTLQMLSLAGPTTE*ADSTESVSRPPPWL
Trigger: GAGCCAAGGCGGCGGCCTGGAGACAGATTCTGTGGAATCTGCCCACTCTGTTGTGGGGCCTGCCAAGCTCAGCATCTGCAGGGTGGACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS-3UTR CAA 90 bp TTCCTACCACAAAACAGGAAATGCCCCAGACGTGCCCTGCAGGACGTGGCTCGGGGACTCGCCGCGGCATaGTTCACCTGGCCGTGGACC +
Preference number: 5 (lower is better)
Translates to: FLPQNRKCPRRALQDVARGLAAA*FTWPWT
Trigger: GGTCCACGGCCAGGTGAACAATGCCGCGGCGAGTCC...CCGAGCCACGTCCTGCAGGGCACGTCTGGGGCATTTCCTGTTTTGTGGTAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CAA 90 bp ACAGCAGGCGCTGGCCGTGCCGTCCTCACACAGCGATGCCTGGTCCTCGCGGGAGAGTCAGCCTCAGGATaGGGTTCGGTTCTGAAAGGT +
Preference number: 5 (lower is better)
Translates to: TAGAGRAVLTQRCLVLAGESASG*GSVLKG
Trigger: ACCTTTCAGAACCGAACCCAATCCTGAGGCTGACTC...TCCCGCGAGGACCAGGCATCGCTGTGTGAGGACGGCACGGCCAGCGCCTGCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS GCA 90 bp GTTGTGGCGCTTTGTGGGCAGGGAGGCCGATGCGGATGCGTGTGTTaGCAACATGTGCAAAGGACTCGCCGCGGCATTGTTCACCTGGCC +
Preference number: 5 (lower is better)
Translates to: VVALCGQGGRCGCVC*QHVQRTRRGIVHLA
Trigger: GGCCAGGTGAACAATGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACACGCATCCGCATCGGCCTCCCTGCCCACAAAGCGCCACAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS GCA 90 bp CCCGGCTCCCCTGTGTCCTGCTCTGTGCCGATGCACTGCTCCCTCTaGAAGGGTCCTTGTGAGGGACATGGGACCGTAATTCCTCTGTGG +
Preference number: 5 (lower is better)
Translates to: PGSPVSCSVPMHCSL*KGPCEGHGTVIPLW
Trigger: CCACAGAGGAATTACGGTCCCATGTCCCTCACAAGGACCCTTGCAGAGGGAGCAGTGCATCGGCACAGAGCAGGACACAGGGGAGCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529652.1
ENST00000571989.1
CDS GCA 90 bp CAGCCTCAGCCCGGCTCCCCTGTGTCCTGCTCTGTGCCGATGCACTaGTCCCTCTGCAAGGGTCCTTGTGAGGGACATGGGACCGTAATT +
Preference number: 5 (lower is better)
Translates to: QPQPGSPVSCSVPMH*SLCKGPCEGHGTVI
Trigger: AATTACGGTCCCATGTCCCTCACAAGGACCCTTGCAGAGGGAGCAGTGCATCGGCACAGAGCAGGACACAGGGGAGCCGGGCTGAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529652.1
ENST00000571989.1
CDS GCA 90 bp CTGGTCACCGTTGTGGCGCTTTGTGGGCAGGGAGGCCGATGCGGATaGGTGTGTTGCCAACATGTGCAAAGGACTCGCCGCGGCCCAAAT +
Preference number: 5 (lower is better)
Translates to: LVTVVALCGQGGRCG*VCCQHVQRTRRGPN
Trigger: ATTTGGGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACACGCATCCGCATCGGCCTCCCTGCCCACAAAGCGCCACAACGGTGACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571989.1
CDS CCA 90 bp TCCCGTGGGGGAGGGCAGAGGGCTGATGAGGTGGGCCATGGTGTCTaGAATGTTGATGGTCAGGGGCGAGATGTGTGGCTGTACGGCCTT +
Preference number: 5 (lower is better)
Translates to: SRGGGQRADEVGHGV*NVDGQGRDVWLYGL
Trigger: AAGGCCGTACAGCCACACATCTCGCCCCTGACCATCAACATTCCAGACACCATGGCCCACCTCATCAGCCCTCTGCCCTCCCCCACGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000335255.10
ENST00000473637.6
ENST00000526383.2
ENST00000527313.6
ENST00000531030.5
ENST00000570585.1
CDS CCA 90 bp GGACCAGCTAGGGATACCCACATCATCAAATCCTCACCCCAAATCTaGCTGCCAGATCCCCACCGAGGCACGCGTGAGCACCTGGCGGCC +
Preference number: 5 (lower is better)
Translates to: GPARDTHIIKSSPQI*LPDPHRGTREHLAA
Trigger: GGCCGCCAGGTGCTCACGCGTGCCTCGGTGGGGATCTGGCAGCCAGATTTGGGGTGAGGATTTGATGATGTGGGTATCCCTAGCTGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529652.1
CDS CCA 90 bp CTGCTCTGGGGCTGTCAATCCAGTGGCGGCAGCTGCTGCTCTGCCTaGAAAGGCTCCGCTTTGAGGCTGGGTGTGAAAGACGTCCAGGGA +
Preference number: 5 (lower is better)
Translates to: LLWGCQSSGGSCCSA*KGSALRLGVKDVQG
Trigger: TCCCTGGACGTCTTTCACACCCAGCCTCAAAGCGGAGCCTTTCCAGGCAGAGCAGCAGCTGCCGCCACTGGATTGACAGCCCCAGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529652.1
CDS CCA 90 bp CAAACACAGCACACATGGTACGCTACGCCCTGGTGCCTAGAGATGTaGGAGGGGGACTTGCCCACCTGTCCGTCAAGGGCCAGCCCTCTC +
Preference number: 5 (lower is better)
Translates to: QTQHTWYATPWCLEM*EGDLPTCPSRASPL
Trigger: GAGAGGGCTGGCCCTTGACGGACAGGTGGGCAAGTCCCCCTCCCACATCTCTAGGCACCAGGGCGTAGCGTACCATGTGTGCTGTGTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS TCA 90 bp CTCAGCTTCCAGAAAGCACGGCTGCCACAAAGCAGGAAGCTGGGCTaGGGAAGAGGCTTGGAGCCCAACGAGAGGGCAGGGGAGACTCCA +
Preference number: 5 (lower is better)
Translates to: LSFQKARLPQSRKLG*GRGLEPNERAGETP
Trigger: TGGAGTCTCCCCTGCCCTCTCGTTGGGCTCCAAGCCTCTTCCTCAGCCCAGCTTCCTGCTTTGTGGCAGCCGTGCTTTCTGGAAGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS GCA 90 bp CTGGTCACCGTTGTGGCGCTTTGTGGGCAGGGAGGCCGATGCGGATaGGTGTGTTGCCAACATGTGCAAAGGACTCGCCGCGGCATTGTT +
Preference number: 5 (lower is better)
Translates to: LVTVVALCGQGGRCG*VCCQHVQRTRRGIV
Trigger: AACAATGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACACGCATCCGCATCGGCCTCCCTGCCCACAAAGCGCCACAACGGTGACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS GCA 90 bp CAGGGGTTCTCACGGCAGAACCAGGTGGACACAAACAGGGCAAGGTaGTTGGATGCCAAGTGGCTCCGCCATCTCTGCTGGGCTCTGCAC +
Preference number: 5 (lower is better)
Translates to: QGFSRQNQVDTNRAR*LDAKWLRHLCWALH
Trigger: GTGCAGAGCCCAGCAGAGATGGCGGAGCCACTTGGCATCCAAGCACCTTGCCCTGTTTGTGTCCACCTGGTTCTGCCGTGAGAACCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531030.5
CDS-3UTR CAA 90 bp TGCAGTCATTTCATACCTTTCAATGGGCGTCACCGCAGTGACGCTGCCCCAGCCTCCGGCTGGTCACCGTaGTGGCGCTTTGTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: CSHFIPFNGRHRSDAAPASGWSP*WRFVGR
Trigger: CCTGCCCACAAAGCGCCACAACGGTGACCAGCCGGA...GGCTGGGGCAGCGTCACTGCGGTGACGCCCATTGAAAGGTATGAAATGACTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CAA 90 bp CCACAGCGTCCGTCCACCTGTCCACGCGAGCCACATGCTGAAATGGAGGTGGATTCGCCGTCTTCTGTCTaGATCCGCTTCAGCTCCGGC +
Preference number: 5 (lower is better)
Translates to: PQRPSTCPREPHAEMEVDSPSSV*IRFSSG
Trigger: GCCGGAGCTGAAGCGGATCAAGACAGAAGACGGCGA...ATCCACCTCCATTTCAGCATGTGGCTCGCGTGGACAGGTGGACGGACGCTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CAA 90 bp ACAGCAGGCGCTGGCCGTGCCGTCCTCACACAGCGATGCCTGGTCCTCGCGGGACTGCTCATCTATGGTTaGTTACTGCTCTCGCTTCGA +
Preference number: 5 (lower is better)
Translates to: TAGAGRAVLTQRCLVLAGLLIYG*LLLSLR
Trigger: TCGAAGCGAGAGCAGTAACAAACCATAGATGAGCAG...TCCCGCGAGGACCAGGCATCGCTGTGTGAGGACGGCACGGCCAGCGCCTGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS GCA 90 bp CCTGAATGTGCACGGCAGAACCAGGTGGACACAAACAGGGCAAGGTaGTTGGATGCCAAGTGGCTCCGCCATCTCTGCTGGGCTCTGCAC +
Preference number: 5 (lower is better)
Translates to: PECARQNQVDTNRAR*LDAKWLRHLCWALH
Trigger: GTGCAGAGCCCAGCAGAGATGGCGGAGCCACTTGGCATCCAAGCACCTTGCCCTGTTTGTGTCCACCTGGTTCTGCCGTGCACATTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526383.2
CDS CCA 90 bp ACAGAGTGGGCAGATTCCACAGAATCTGTCTCCAGGCCGCCGCCTTaGCTCTGTTTCTCTGGGGCACCCTCACCTACCAGGTGCCATCAG +
Preference number: 5 (lower is better)
Translates to: TEWADSTESVSRPPP*LCFSGAPSPTRCHQ
Trigger: CTGATGGCACCTGGTAGGTGAGGGTGCCCCAGAGAAACAGAGCCAAGGCGGCGGCCTGGAGACAGATTCTGTGGAATCTGCCCACTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS-3UTR CAA 90 bp TGGGTTCTCAAGGTTCCATGCGGCCACAGCGTCCGTCCACCTGTCCACGCGAGCAGGAGTAAGGCGGCTTaGAATCATCCTTCGGGCTGT +
Preference number: 5 (lower is better)
Translates to: WVLKVPCGHSVRPPVHASRSKAA*NHPSGC
Trigger: ACAGCCCGAAGGATGATTCAAAGCCGCCTTACTCCT...GCTCGCGTGGACAGGTGGACGGACGCTGTGGCCGCATGGAACCTTGAGAACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CAA 90 bp GAGTCCCGGCAGTTCCTTCCCGGCACTGGCTCGTCCCTGGGTTCTCAAGGTTCCATGCGGATGCGTGTGTaGCCAACATGTGCAAAGGAC +
Preference number: 5 (lower is better)
Translates to: ESRQFLPGTGSSLGSQGSMRMRV*PTCAKD
Trigger: GTCCTTTGCACATGTTGGCAACACACGCATCCGCAT...GGAACCTTGAGAACCCAGGGACGAGCCAGTGCCGGGAAGGAACTGCCGGGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CAA 90 bp AGGACAATGACGGAAGTGGGTAGACGACTGAAGGAGATCAGCTGTCCACCGCGTCACCGTTGTGGCGCTTaGTGGGCAGGGAGGCCGATG +
Preference number: 5 (lower is better)
Translates to: RTMTEVGRRLKEISCPPRHRCGA*WAGRPM
Trigger: CATCGGCCTCCCTGCCCACAAAGCGCCACAACGGTG...ACGCGGTGGACAGCTGATCTCCTTCAGTCGTCTACCCACTTCCGTCATTGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CAA 90 bp TGCTGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGAGTTGATATCGTTAAAGAGGCCAAGGGGCCCATaGTTCACCTGGCCGTGGACC +
Preference number: 5 (lower is better)
Translates to: CWREAASPFGTTELISLKRPRGP*FTWPWT
Trigger: GGTCCACGGCCAGGTGAACAATGGGCCCCTTGGCCT...CTTTAACGATATCAACTCTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS GCA 90 bp TTTGTGGGCAGGGAGGCCGATGCGGATGCGTGTGTTGCCAACATGTaGAAAGGACTCGCCGCGGCTGAAATGACACGAGGGAGTCAGAAC +
Preference number: 5 (lower is better)
Translates to: FVGREADADACVANM*KGLAAAEMTRGSQN
Trigger: GTTCTGACTCCCTCGTGTCATTTCAGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACACGCATCCGCATCGGCCTCCCTGCCCACAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS CCA 90 bp GTGGGCCATGGTGTCTGGAATGTTGATGGTCAGGGGCGAGATGTGTaGCTGTACGGCCTTCACTGGAGACTCAGACGCCTCCTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: VGHGVWNVDGQGRDV*LYGLHWRLRRLLLL
Trigger: GAGAAGCAGGAGGCGTCTGAGTCTCCAGTGAAGGCCGTACAGCCACACATCTCGCCCCTGACCATCAACATTCCAGACACCATGGCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335255.10
ENST00000473637.6
ENST00000526383.2
ENST00000527313.6
ENST00000531030.5
ENST00000570585.1
CDS CCA 90 bp CGGGCTGCCGGAAAAGGCTTTGCTCTTGTCTCCAGAAGCACCTGCTaGTCTGTCTGGATGGGGCCTGCTGTGTCAACTGAGGCAACTCCA +
Preference number: 5 (lower is better)
Translates to: RAAGKGFALVSRSTC*SVWMGPAVSTEATP
Trigger: TGGAGTTGCCTCAGTTGACACAGCAGGCCCCATCCAGACAGACCAGCAGGTGCTTCTGGAGACAAGAGCAAAGCCTTTTCCGGCAGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473637.6
ENST00000529652.1
CDS-3UTR CAA 90 bp TGGGTTCTCAAGGTTCCATGCGGCCACAGCGTCCGTCCACCTGTCCACGCGAGCGGCTCTACTTTCACTTaGACTTCCCTGTGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: WVLKVPCGHSVRPPVHASGSTFT*TSLWSP
Trigger: TGGAGACCACAGGGAAGTCAAAGTGAAAGTAGAGCC...GCTCGCGTGGACAGGTGGACGGACGCTGTGGCCGCATGGAACCTTGAGAACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CAA 90 bp AGTTCTGGACACCCTTTTCCCTTACGGCTGCCGGTGGCGTGTCCACGCTCAGGGATGCGGATGCGTGTGTaGCCAACATGTGCAAAGGAC +
Preference number: 5 (lower is better)
Translates to: SSGHPFPLRLPVACPRSGMRMRV*PTCAKD
Trigger: GTCCTTTGCACATGTTGGCAACACACGCATCCGCAT...CCCTGAGCGTGGACACGCCACCGGCAGCCGTAAGGGAAAAGGGTGTCCAGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR CAA 90 bp CCCAGCAGGTGCTCAGTGGAGACACCGTCTCCCAAATCAGGTTTTGTTGTGTGTTCCGGCTGGTCACCGTaGTGGCGCTTTGTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: PSRCSVETPSPKSGFVVCSGWSP*WRFVGR
Trigger: CCTGCCCACAAAGCGCCACAACGGTGACCAGCCGGA...ACACACAACAAAACCTGATTTGGGAGACGGTGTCTCCACTGAGCACCTGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CAA 90 bp AGGACAATGACGGAAGTGGGTAGACGACTGAAGGAGATCAGCTGTCCACCGCGTTCCACACGCTGCGCTTaGCTGCGGTCACACACACGG +
Preference number: 5 (lower is better)
Translates to: RTMTEVGRRLKEISCPPRSTRCA*LRSHTR
Trigger: CCGTGTGTGTGACCGCAGCAAAGCGCAGCGTGTGGA...ACGCGGTGGACAGCTGATCTCCTTCAGTCGTCTACCCACTTCCGTCATTGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS TCA 90 bp CCTGCTTGGTGGCTTTCCTCTAGAAGTGTCCTTCACGTTTGTCACTaGTCGTCCTCCAAGCCTGGGCCATGGGGATGCCACAGAAGGCCC +
Preference number: 5 (lower is better)
Translates to: PAWWLSSRSVLHVCH*SSSKPGPWGCHRRP
Trigger: GGGCCTTCTGTGGCATCCCCATGGCCCAGGCTTGGAGGACGATCAGTGACAAACGTGAAGGACACTTCTAGAGGAAAGCCACCAAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574694.1
CDS GCA 90 bp TTCCGGGCTGCCGGAAAAGGCTTTGCTCTTGTCTCCAGAAGCACCTaGTGGTCTGTCTGGATGGGGCCTGCTGTGTCAACTGAGGCAACT +
Preference number: 5 (lower is better)
Translates to: FRAAGKGFALVSRST*WSVWMGPAVSTEAT
Trigger: AGTTGCCTCAGTTGACACAGCAGGCCCCATCCAGACAGACCAGCAGGTGCTTCTGGAGACAAGAGCAAAGCCTTTTCCGGCAGCCCGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473637.6
ENST00000529652.1
CDS GCA 90 bp AGCACCCTGCCCTTCCCTTCACCTGGTGTCCACAGTGGGCGGGATTaGCTGCTTGGTGGCTTTCCTCTAGAAGTGTCCTTCACGTTTGTC +
Preference number: 5 (lower is better)
Translates to: STLPFPSPGVHSGRD*LLGGFPLEVSFTFV
Trigger: GACAAACGTGAAGGACACTTCTAGAGGAAAGCCACCAAGCAGGCAATCCCGCCCACTGTGGACACCAGGTGAAGGGAAGGGCAGGGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574694.1
CDS GCA 90 bp TGTGTCCTGGGTCAGTCCACAGAGGTGTGTGGGCAGAACAGAGACTaGTGGCTGCTAACGGCTGACCAGGCTGAGTTAATTCCAAAGGCC +
Preference number: 5 (lower is better)
Translates to: CVLGQSTEVCGQNRD*WLLTADQAELIPKA
Trigger: GGCCTTTGGAATTAACTCAGCCTGGTCAGCCGTTAGCAGCCAGCAGTCTCTGTTCTGCCCACACACCTCTGTGGACTGACCCAGGACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS CCA 90 bp GCAAAGGACTCGCCGCGGCATTGTTCACCTGGCCGTGGACCGCAGTaGGGACTGATGCCACGTGAGTGCCGTTTTGTGTTACAGTTTTTA +
Preference number: 5 (lower is better)
Translates to: AKDSPRHCSPGRGPQ*GLMPRECRFVLQFL
Trigger: TAAAAACTGTAACACAAAACGGCACTCACGTGGCATCAGTCCCCACTGCGGTCCACGGCCAGGTGAACAATGCCGCGGCGAGTCCTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS CCA 90 bp TCCTCCAAGCCTGGGCCATGGGGATGCCACAGAAGGCCCCTGCAGTaGGGAAGTTGTGTGAACAACTCCAAGACTCCTTTGCTAAAGGAC +
Preference number: 5 (lower is better)
Translates to: SSKPGPWGCHRRPLQ*GSCVNNSKTPLLKD
Trigger: GTCCTTTAGCAAAGGAGTCTTGGAGTTGTTCACACAACTTCCCCACTGCAGGGGCCTTCTGTGGCATCCCCATGGCCCAGGCTTGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574694.1
CDS CCA 90 bp CCCTGTAAATGGGAAAGAGCATCCTTTCCTCACCTTCCCGGTTCCTaGAGTCTAGGACTACCTCTTGTCTCCCCAGCACCCTGCCCTTCC +
Preference number: 5 (lower is better)
Translates to: PCKWERASFPHLPGS*SLGLPLVSPAPCPS
Trigger: GGAAGGGCAGGGTGCTGGGGAGACAAGAGGTAGTCCTAGACTCCAGGAACCGGGAAGGTGAGGAAAGGATGCTCTTTCCCATTTACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574694.1
CDS CCA 90 bp CGGGGCTCCATCTGTCCCATAGGAGAGAAGCACCACAGTTTCTCATaGATGCTGCTCACCTGTGTCCTGGGTCAGTCCACAGAGGTGTGT +
Preference number: 5 (lower is better)
Translates to: RGSICPIGEKHHSFS*MLLTCVLGQSTEVC
Trigger: ACACACCTCTGTGGACTGACCCAGGACACAGGTGAGCAGCATCCATGAGAAACTGTGGTGCTTCTCTCCTATGGGACAGATGGAGCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS-3UTR CAA 90 bp TCCGGGCTGCCGGAAAAGGCTTTGCTCTTGTCTCCAGAAGCACCTGCTGGTCTGATGGTGTCTGGAATGTaGATGGTCAGGGGCGAGATG +
Preference number: 5 (lower is better)
Translates to: SGLPEKALLLSPEAPAGLMVSGM*MVRGEM
Trigger: CATCTCGCCCCTGACCATCAACATTCCAGACACCAT...CAGACCAGCAGGTGCTTCTGGAGACAAGAGCAAAGCCTTTTCCGGCAGCCCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR CAA 90 bp TCGCGGGAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGGTGCTCGGACATACGATGCATTaGCTTGGTGTCCCAGCCAAG +
Preference number: 5 (lower is better)
Translates to: SREDRVSLVGRSSAQQVLGHTMH*LGVPAK
Trigger: CTTGGCTGGGACACCAAGCAAATGCATCGTATGTCC...GAGCACCTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTCCCGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CAA 90 bp ACAGCAGGCGCTGGCCGTGCCGTCCTCACACAGCGATGCCTGGTCCTCGCGGGATCCCTTCTTTACCATTaGAATGGACATTTTCCTTAC +
Preference number: 5 (lower is better)
Translates to: TAGAGRAVLTQRCLVLAGSLLYH*NGHFPY
Trigger: GTAAGGAAAATGTCCATTCAAATGGTAAAGAAGGGA...TCCCGCGAGGACCAGGCATCGCTGTGTGAGGACGGCACGGCCAGCGCCTGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CAA 90 bp GGTGTCTCTGGACAACCTTCCACCTGTCGTTTCTCATCCCAGGTTCCGGGCTGCCTGCCGGAAAAGGCTTaGCTCTTGTCTCCAGAAGCA +
Preference number: 5 (lower is better)
Translates to: GVSGQPSTCRFSSQVPGCLPEKA*LLSPEA
Trigger: TGCTTCTGGAGACAAGAGCAAAGCCTTTTCCGGCAG...GCAGCCCGGAACCTGGGATGAGAAACGACAGGTGGAAGGTTGTCCAGAGACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS GCA 90 bp GAGATGTGTGGCTGTACGGCCTTCACTGGAGACTCAGACGCCTCCTaGTTCTCTCTCTTCTCGCTGGACAGGGCAGTGAACGTTATCTTG +
Preference number: 5 (lower is better)
Translates to: EMCGCTAFTGDSDAS*FSLFSLDRAVNVIL
Trigger: CAAGATAACGTTCACTGCCCTGTCCAGCGAGAAGAGAGAGAAGCAGGAGGCGTCTGAGTCTCCAGTGAAGGCCGTACAGCCACACATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335255.10
ENST00000473637.6
ENST00000526383.2
ENST00000527313.6
ENST00000531030.5
ENST00000570585.1
CDS GCA 90 bp TTTGAGGCTGGGTGTGAAAGACGTCCAGGGACCCTCAGACGTCACTaGCGTTTTACATGCTCACAACGCAACACCCATCGTCACTGTGGG +
Preference number: 5 (lower is better)
Translates to: FEAGCERRPGTLRRH*RFTCSQRNTHRHCG
Trigger: CCCACAGTGACGATGGGTGTTGCGTTGTGAGCATGTAAAACGGCAGTGACGTCTGAGGGTCCCTGGACGTCTTTCACACCCAGCCTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529652.1
CDS-3UTR CAA 90 bp TGGGTTCTCAAGGTTCCATGCGGCCACAGCGTCCGTCCACCTGTCCACGCGAGCCACGTGAGTGCCGTTTaGTGTTACAGTTTTTATTGG +
Preference number: 5 (lower is better)
Translates to: WVLKVPCGHSVRPPVHASHVSAV*CYSFYW
Trigger: CCAATAAAAACTGTAACACAAAACGGCACTCACGTG...GCTCGCGTGGACAGGTGGACGGACGCTGTGGCCGCATGGAACCTTGAGAACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CAA 90 bp GAGTCCCGGCAGTTCCTTCCCGGCACTGGCTCGTCCCTGGGTTCTCAAGGTTCCAACTACGTTGTTTCTTaGCCCCAAATGAAATCCACG +
Preference number: 5 (lower is better)
Translates to: ESRQFLPGTGSSLGSQGSNYVVS*PQMKST
Trigger: CGTGGATTTCATTTGGGGCAAAGAAACAACGTAGTT...GGAACCTTGAGAACCCAGGGACGAGCCAGTGCCGGGAAGGAACTGCCGGGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS TCA 90 bp CACGGGAATCCCATGACGGCCGACTCCACGACCACTTCCCCAGCATaGCTAGATTTCCTGCAGCTTCGAAATGCAAACATTGCCTCAGAC +
Preference number: 5 (lower is better)
Translates to: HGNPMTADSTTTSPA*LDFLQLRNANIASD
Trigger: GTCTGAGGCAATGTTTGCATTTCGAAGCTGCAGGAAATCTAGTCATGCTGGGGAAGTGGTCGTGGAGTCGGCCGTCATGGGATTCCCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575578.1
CDS-3UTR CAA 90 bp TTCCTACCACAAAACAGGAAATGCCCCAGACGTGCCCTGCAGGACGTGGCTCGGGCAGTGAACGTTATCTaGATGTTTGTGCTCGGGAAC +
Preference number: 5 (lower is better)
Translates to: FLPQNRKCPRRALQDVARAVNVI*MFVLGN
Trigger: GTTCCCGAGCACAAACATCAAGATAACGTTCACTGC...CCGAGCCACGTCCTGCAGGGCACGTCTGGGGCATTTCCTGTTTTGTGGTAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CAA 90 bp TGCAGTCATTTCATACCTTTCAATGGGCGTCACCGCAGTGACGCTGCCCCAGCCGGCTCTACTTTCACTTaGACTTCCCTGTGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: CSHFIPFNGRHRSDAAPAGSTFT*TSLWSP
Trigger: TGGAGACCACAGGGAAGTCAAAGTGAAAGTAGAGCC...GGCTGGGGCAGCGTCACTGCGGTGACGCCCATTGAAAGGTATGAAATGACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CAA 90 bp GCCGCTTCCAGGCCACACCCAGGAAATCTACAAGAGGCGAGAGTATTTTTCCCTCAGCATGTCTTACCATaGTTCACCTGGCCGTGGACC +
Preference number: 5 (lower is better)
Translates to: AASRPHPGNLQEARVFFPQHVLP*FTWPWT
Trigger: GGTCCACGGCCAGGTGAACAATGGTAAGACATGCTG...AGGGAAAAATACTCTCGCCTCTTGTAGATTTCCTGGGTGTGGCCTGGAAGCGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575578.1
CDS CCA 90 bp CCGACCAGCATGTCTTACCATTGTTCACCTGGCCGTGGACCGCAGTaGGGACTGATGCCACGTGAGTGCCGTTTTGTGTTACAGTTTTTA +
Preference number: 5 (lower is better)
Translates to: PTSMSYHCSPGRGPQ*GLMPRECRFVLQFL
Trigger: TAAAAACTGTAACACAAAACGGCACTCACGTGGCATCAGTCCCCACTGCGGTCCACGGCCAGGTGAACAATGGTAAGACATGCTGGTCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575578.1
CDS-3UTR CAA 90 bp GATGCGTGTGTTGCCAACATGTGCAAAGGACTCGCCGCGGCTGCAGTTGGTGTGGCCTGTTCTATTAATTaGCTTTCAGAGGCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: DACVANMCKGLAAAAVGVACSIN*LSEAGS
Trigger: AGACCCAGCCTCTGAAAGCAAATTAATAGAACAGGC...CACACCAACTGCAGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACACGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR CAA 90 bp AGAAACTCTCATCTCTTTTCAGGCAGGTCCTCCCACGGGAATCCCATGACGGCCGGCTCTACTTTCACTTaGACTTCCCTGTGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: RNSHLFSGRSSHGNPMTAGSTFT*TSLWSP
Trigger: TGGAGACCACAGGGAAGTCAAAGTGAAAGTAGAGCC...GGCCGTCATGGGATTCCCGTGGGAGGACCTGCCTGAAAAGAGATGAGAGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575578.1
CDS-3UTR CAA 90 bp AAAACGTCTCCAAGGGGACATACGATGCATTTGCTTGGTGTCCCAGCCAAGCTCATGGTGTCTGGAATGTaGATGGTCAGGGGCGAGATG +
Preference number: 5 (lower is better)
Translates to: KTSPRGHTMHLLGVPAKLMVSGM*MVRGEM
Trigger: CATCTCGCCCCTGACCATCAACATTCCAGACACCAT...GAGCTTGGCTGGGACACCAAGCAAATGCATCGTATGTCCCCTTGGAGACGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CAA 90 bp TGGTCCTCGCGGGAGGACAGAGTTTCACTCGTAGGTAGAAGCTCAGCCCAGCAGTCAGAGTGGAAAATTTaGCCAGGGACAAAGTCAACA +
Preference number: 5 (lower is better)
Translates to: WSSREDRVSLVGRSSAQQSEWKI*PGTKST
Trigger: TGTTGACTTTGTCCCTGGCAAAATTTTCCACTCTGA...CTGCTGGGCTGAGCTTCTACCTACGAGTGAAACTCTGTCCTCCCGCGAGGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CAA 90 bp TGCCGGAAAAGGCTTTGCTCTTGTCTCCAGAAGCACCTGCTGGTCTGTCTGGATGAAAAGGCTTTGCTCTaGTCTCCAGAAGCACCTGCT +
Preference number: 5 (lower is better)
Translates to: CRKRLCSCLQKHLLVCLDEKALL*SPEAPA
Trigger: AGCAGGTGCTTCTGGAGACAAGAGCAAAGCCTTTTC...ATCCAGACAGACCAGCAGGTGCTTCTGGAGACAAGAGCAAAGCCTTTTCCGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS CCA 90 bp TCACTGCCGTTTTACATGCTCACAACGCAACACCCATCGTCACTGTaGGACCAGCTAGGGATACCCACATCATCAAATCCTCACCCCAAA +
Preference number: 5 (lower is better)
Translates to: SLPFYMLTTQHPSSL*DQLGIPTSSNPHPK
Trigger: TTTGGGGTGAGGATTTGATGATGTGGGTATCCCTAGCTGGTCCCACAGTGACGATGGGTGTTGCGTTGTGAGCATGTAAAACGGCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529652.1
CDS-3UTR CAA 90 bp TGCTGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGAGTTGATATCGTTAAAGGCCTGTTCTATTAATTaGCTTTCAGAGGCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: CWREAASPFGTTELISLKACSIN*LSEAGS
Trigger: AGACCCAGCCTCTGAAAGCAAATTAATAGAACAGGC...CTTTAACGATATCAACTCTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CAA 90 bp GATGCGTGTGTTGCCAACATGTGCAAAGGACTCGCCGCGGCTGCAGTTGGTGTGTTTGGCACCACAGAGTaGATATCGTTAAAGAAAAGC +
Preference number: 5 (lower is better)
Translates to: DACVANMCKGLAAAAVGVFGTTE*ISLKKS
Trigger: GCTTTTCTTTAACGATATCAACTCTGTGGTGCCAAA...CACACCAACTGCAGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACACGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR CAA 90 bp CTGACTCGGAACAGCATCCACGCTGTAGGTGTCTCTGGACAACCTTCCACCTGTCACGTGAGTGCCGTTTaGTGTTACAGTTTTTATTGG +
Preference number: 5 (lower is better)
Translates to: LTRNSIHAVGVSGQPSTCHVSAV*CYSFYW
Trigger: CCAATAAAAACTGTAACACAAAACGGCACTCACGTG...ACAGGTGGAAGGTTGTCCAGAGACACCTACAGCGTGGATGCTGTTCCGAGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR CAA 90 bp AGGACAATGACGGAAGTGGGTAGACGACTGAAGGAGATCAGCTGTCCACCGCGTCTCCCAAATCAGGTTTaGTTGTGTGTGGGTTTTGTT +
Preference number: 5 (lower is better)
Translates to: RTMTEVGRRLKEISCPPRLPNQV*LCVGFV
Trigger: AACAAAACCCACACACAACAAAACCTGATTTGGGAG...ACGCGGTGGACAGCTGATCTCCTTCAGTCGTCTACCCACTTCCGTCATTGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CAA 90 bp TGCTGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGAGTTGATATCGTTAAAGTCAGAGTGGAAAATTTaGCCAGGGACAAAGTCAACA +
Preference number: 5 (lower is better)
Translates to: CWREAASPFGTTELISLKSEWKI*PGTKST
Trigger: TGTTGACTTTGTCCCTGGCAAAATTTTCCACTCTGA...CTTTAACGATATCAACTCTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CAA 90 bp CTCTCATCTCTTTTCAGGCAGGTCCTCCCACGGGAATCCCATGACGGCCGACTCTTCGAAATGCAAACATaGCCTCAGACAAAAGCTAAA +
Preference number: 5 (lower is better)
Translates to: LSSLFRQVLPRESHDGRLFEMQT*PQTKAK
Trigger: TTTAGCTTTTGTCTGAGGCAATGTTTGCATTTCGAA...GAGTCGGCCGTCATGGGATTCCCGTGGGAGGACCTGCCTGAAAAGAGATGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575578.1
CDS-3UTR CAA 90 bp CGTTGTTTCTTTGCCCCAAATGAAATCCACGGAAAGGGCCTGTGTGATTCTGAATTCAGGGTGAGCTGTTaGTCGGGAGCCATCGTAATC +
Preference number: 5 (lower is better)
Translates to: RCFFAPNEIHGKGLCDSEFRVSC*SGAIVI
Trigger: GATTACGATGGCTCCCGACAAACAGCTCACCCTGAA...TTCAGAATCACACAGGCCCTTTCCGTGGATTTCATTTGGGGCAAAGAAACAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CAA 90 bp GCCGCTTCCAGGCCACACCCAGGAAATCTACAAGAGGCGAGAGTATTTTTCCCTCACGTGAGTGCCGTTTaGTGTTACAGTTTTTATTGG +
Preference number: 5 (lower is better)
Translates to: AASRPHPGNLQEARVFFPHVSAV*CYSFYW
Trigger: CCAATAAAAACTGTAACACAAAACGGCACTCACGTG...AGGGAAAAATACTCTCGCCTCTTGTAGATTTCCTGGGTGTGGCCTGGAAGCGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000575578.1
CDS-3UTR CAA 90 bp TTCTCATCCCAGGTTCCGGGCTGCCGGAAAAGGCTTTGCTCTTGTCTCCAGAAGCCAAATCAGGTTTTGTaGTGTGTGGGTTTTGTTCAA +
Preference number: 5 (lower is better)
Translates to: FSSQVPGCRKRLCSCLQKPNQVL*CVGFVQ
Trigger: TTGAACAAAACCCACACACAACAAAACCTGATTTGG...CTTCTGGAGACAAGAGCAAAGCCTTTTCCGGCAGCCCGGAACCTGGGATGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS-3UTR CAA 90 bp CCCAGCAGGTGCTCAGTGGAGACACCGTCTCCCAAATCAGGTTTTGTTGTGTGTCTCCCAAATCAGGTTTaGTTGTGTGTGGGTTTTGTT +
Preference number: 5 (lower is better)
Translates to: PSRCSVETPSPKSGFVVCLPNQV*LCVGFV
Trigger: AACAAAACCCACACACAACAAAACCTGATTTGGGAG...ACACACAACAAAACCTGATTTGGGAGACGGTGTCTCCACTGAGCACCTGCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS-3UTR CAA 90 bp TGGCGGGAGGCCGCGTCTCCTTTTGGCACCACAGAGTTGATATCGTTAAAGAAATACGGGAGTTCCCTTTaGTTTTCTCGTTTGGTTCAG +
Preference number: 5 (lower is better)
Translates to: WREAASPFGTTELISLKKYGSSL*FSRLVQ
Trigger: CTGAACCAAACGAGAAAACAAAAGGGAACTCCCGTA...TTTCTTTAACGATATCAACTCTGTGGTGCCAAAAGGAGACGCGGCCTCCCGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS TCA 90 bp AAGCTTCCTTTTCATTTTCAGGCTGTGAGTTGTCAGCCATTAAATTaGGGTCAGATGGCATCACTCGGCCCACCTTGTACCCTGAAGACC +
Preference number: 5 (lower is better)
Translates to: KLPFHFQAVSCQPLN*GQMASLGPPCTLKT
Trigger: GGTCTTCAGGGTACAAGGTGGGCCGAGTGATGCCATCTGACCTCAATTTAATGGCTGACAACTCACAGCCTGAAAATGAAAAGGAAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335255.10
ENST00000473637.6
ENST00000526383.2
ENST00000531030.5
ENST00000570585.1
CDS-3UTR CAA 90 bp CGTTGTTTCTTTGCCCCAAATGAAATCCACGGAAAGGGCCTGTGTGATTCTGAAGCAGTGAACGTTATCTaGATGTTTGTGCTCGGGAAC +
Preference number: 5 (lower is better)
Translates to: RCFFAPNEIHGKGLCDSEAVNVI*MFVLGN
Trigger: GTTCCCGAGCACAAACATCAAGATAACGTTCACTGC...TTCAGAATCACACAGGCCCTTTCCGTGGATTTCATTTGGGGCAAAGAAACAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS GCA 90 bp AACATGCGATGGGTAATGTTATGTGCCAGCCTGGCTGAGCCACAGTaGCCAGATTTTGGTCAACCATTAATCTGGATGTTTCTGTATAGT +
Preference number: 5 (lower is better)
Translates to: NMRWVMLCASLAEPQ*PDFGQPLIWMFLYS
Trigger: ACTATACAGAAACATCCAGATTAATGGTTGACCAAAATCTGGGCACTGTGGCTCAGCCAGGCTGGCACATAACATTACCCATCGCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS CCA 90 bp TTGTACAAGGACAGGAGTTGTGACTTAGCACCTATCGTGTCTGTGTaGTTTGAGCATCTGCAAGAGTTCTCAGTAGTTGTCATTTCTCCA +
Preference number: 5 (lower is better)
Translates to: LYKDRSCDLAPIVSV*FEHLQEFSVVVISP
Trigger: TGGAGAAATGACAACTACTGAGAACTCTTGCAGATGCTCAAACCACACAGACACGATAGGTGCTAAGTCACAACTCCTGTCCTTGTACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574694.1
CDS-3UTR CAA 90 bp CGTTGTTTCTTTGCCCCAAATGAAATCCACGGAAAGGGCCTGTGTGATTCTGAAAGTCACGTGATGGTTTaGCTTTTATTTCTTAAACGG +
Preference number: 5 (lower is better)
Translates to: RCFFAPNEIHGKGLCDSESHVMV*LLFLKR
Trigger: CCGTTTAAGAAATAAAAGCAAAACCATCACGTGACT...TTCAGAATCACACAGGCCCTTTCCGTGGATTTCATTTGGGGCAAAGAAACAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS-3UTR CAA 90 bp AAATGGAGTGATGTGAAATGCCCAAGACCCCATTATTTTGTAAAGAAAGGACACTTTGGCACCACAGAGTaGATATCGTTAAAGAAAAGC +
Preference number: 5 (lower is better)
Translates to: KWSDVKCPRPHYFVKKGHFGTTE*ISLKKS
Trigger: GCTTTTCTTTAACGATATCAACTCTGTGGTGCCAAA...GTGTCCTTTCTTTACAAAATAATGGGGTCTTGGGCATTTCACATCACTCCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS GCA 72 bp CCCTGCTGGCTCGGCGAAGGAGTGGCTGCCGCTCGCTaGTCTCCCTCATGCGGAGGCCCTGCCCTCGCCCCC +
Preference number: 6 (lower is better)
Translates to: PCWLGEGVAAAR*SPSCGGPALAP
Trigger: GGGGGCGAGGGCAGGGCCTCCGCATGAGGGAGAGCAGCGAGCGGCAGCCACTCCTTCGCCGAGCCAGCAGGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS GCA 72 bp GTGCTCGGGAACCTGAATGTGCACACGCGCGGCAGCTaGAGCGGCGGCGCCCCGCGCCTCTGGAACACGCCG +
Preference number: 6 (lower is better)
Translates to: VLGNLNVHTRGS*SGGAPRLWNTP
Trigger: CGGCGTGTTCCAGAGGCGCGGGGCGCCGCCGCTGCAGCTGCCGCGCGTGTGCACATTCAGGTTCCCGAGCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335255.10
ENST00000473637.6
ENST00000527313.6
CDS GCA 72 bp CAGGAGATGGCCCTGCTGGCTCGGCGAAGGAGTGGCTaGCGCTCGCTGCTCTCCCTCATGCGGAGGCCCTGC +
Preference number: 6 (lower is better)
Translates to: QEMALLARRRSG*RSLLSLMRRPC
Trigger: GCAGGGCCTCCGCATGAGGGAGAGCAGCGAGCGGCAGCCACTCCTTCGCCGAGCCAGCAGGGCCATCTCCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS GCA 72 bp GGCGTGGGCAATACCCGCCTCCTACTCGCAGTCCCCTaGAGGGACGCTGGCTGGTCAGAGACCGACCTCCGC +
Preference number: 6 (lower is better)
Translates to: GVGNTRLLLAVP*RDAGWSETDLR
Trigger: GCGGAGGTCGGTCTCTGACCAGCCAGCGTCCCTGCAGGGGACTGCGAGTAGGAGGCGGGTATTGCCCACGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS CCA 72 bp CGCCTCCTACTCGCAGTCCCCTGCAGGGACGCTGGCTaGTCAGAGACCGACCTCCGCCCCCAGGTCTTCCCT +
Preference number: 6 (lower is better)
Translates to: RLLLAVPCRDAG*SETDLRPQVFP
Trigger: AGGGAAGACCTGGGGGCGGAGGTCGGTCTCTGACCAGCCAGCGTCCCTGCAGGGGACTGCGAGTAGGAGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS CCA 72 bp CAGACAGGAGATGGCCCTGCTGGCTCGGCGAAGGAGTaGCTGCCGCTCGCTGCTCTCCCTCATGCGGAGGCC +
Preference number: 6 (lower is better)
Translates to: QTGDGPAGSAKE*LPLAALPHAEA
Trigger: GGCCTCCGCATGAGGGAGAGCAGCGAGCGGCAGCCACTCCTTCGCCGAGCCAGCAGGGCCATCTCCTGTCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS TCA 72 bp CCAAATCTGGCTGCCAGATCCCCACCGAGGCACGCGTaGGCACCTGGCGGCCACAAGGGACCCGCAGCCTCA +
Preference number: 6 (lower is better)
Translates to: PNLAARSPPRHA*APGGHKGPAAS
Trigger: TGAGGCTGCGGGTCCCTTGTGGCCGCCAGGTGCTCACGCGTGCCTCGGTGGGGATCTGGCAGCCAGATTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529652.1
ENST00000571989.1
CDS TCA 72 bp ACCTCCGCCCCCAGGTCTTCCCTAGCGGAGCGGATGTaGGTCCGGCCAGGTGCGTGGTCAGCTCCTCATGGC +
Preference number: 6 (lower is better)
Translates to: TSAPRSSLAERM*VRPGAWSAPHG
Trigger: GCCATGAGGAGCTGACCACGCACCTGGCCGGACTCACATCCGCTCCGCTAGGGAAGACCTGGGGGCGGAGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS GCA 72 bp AGGGACCCGCAGCCTCAGCCCGGCTCCCCTGTGTCCTaGTCTGTGCCGATGCACTGCTCCCTCTGCAAGGGT +
Preference number: 6 (lower is better)
Translates to: RDPQPQPGSPVS*SVPMHCSLCKG
Trigger: ACCCTTGCAGAGGGAGCAGTGCATCGGCACAGAGCAGGACACAGGGGAGCCGGGCTGAGGCTGCGGGTCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529652.1
ENST00000571989.1
CDS CCA 72 bp GGTGACCCTGGGGCGCTCTGGGCAAACCGGGCTTCCTaGATGACAGCGAGTTTGGGCTGTGCAGCGCCAGGC +
Preference number: 6 (lower is better)
Translates to: GDPGALWANRAS*MTASLGCAAPG
Trigger: GCCTGGCGCTGCACAGCCCAAACTCGCTGTCATCCAGGAAGCCCGGTTTGCCCAGAGCGCCCCAGGGTCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS TCA 72 bp CTGGTGACCGACACCGCTGGGATCTGGTGGACGACGTaGACCGTCTGCACGACGGGTGGCTGGGAGGTCGAG +
Preference number: 6 (lower is better)
Translates to: LVTDTAGIWWTT*TVCTTGGWEVE
Trigger: CTCGACCTCCCAGCCACCCGTCGTGCAGACGGTTCACGTCGTCCACCAGATCCCAGCGGTGTCGGTCACCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS TCA 72 bp TCACCGTCTGGACCGGGGTGGTCTGTGCCGTCTGAATaGTCCGGCTGGCAGTGCCGAGCGTGGCGTGGCCAA +
Preference number: 6 (lower is better)
Translates to: SPSGPGWSVPSE*SGWQCRAWRGQ
Trigger: TTGGCCACGCCACGCTCGGCACTGCCAGCCGGATCATTCAGACGGCACAGACCACCCCGGTCCAGACGGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335255.10
ENST00000473637.6
ENST00000575578.1
CDS TCA 72 bp ATGGTCACCGTCTGGACCGGGGTGGTCTGTGCCGTCTaGATGATCCGGCTGGCAGTGCCGAGCGTGGCGTGG +
Preference number: 6 (lower is better)
Translates to: MVTVWTGVVCAV*MIRLAVPSVAW
Trigger: CCACGCCACGCTCGGCACTGCCAGCCGGATCATTCAGACGGCACAGACCACCCCGGTCCAGACGGTGACCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335255.10
ENST00000473637.6
ENST00000575578.1
CDS GCA 72 bp GTCTTCCCTAGCGGAGCGGATGTGAGTCCGGCCAGGTaGGTGGTCAGCTCCTCATGGCCAGATAGCCGGGGC +
Preference number: 6 (lower is better)
Translates to: VFPSGADVSPAR*VVSSSWPDSRG
Trigger: GCCCCGGCTATCTGGCCATGAGGAGCTGACCACGCACCTGGCCGGACTCACATCCGCTCCGCTAGGGAAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS CCA 72 bp GATCTGGTGGACGACGTGAACCGTCTGCACGACGGGTaGCTGGGAGGTCGAGGTGGTCACTGGGGTGGCCAC +
Preference number: 6 (lower is better)
Translates to: DLVDDVNRLHDG*LGGRGGHWGGH
Trigger: GTGGCCACCCCAGTGACCACCTCGACCTCCCAGCCACCCGTCGTGCAGACGGTTCACGTCGTCCACCAGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS CCA 72 bp TGGGGCCAGTCCGGCCACACTGGTGACCGACACCGCTaGGATCTGGTGGACGACGTGAACCGTCTGCACGAC +
Preference number: 6 (lower is better)
Translates to: WGQSGHTGDRHR*DLVDDVNRLHD
Trigger: GTCGTGCAGACGGTTCACGTCGTCCACCAGATCCCAGCGGTGTCGGTCACCAGTGTGGCCGGACTGGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS CCA 72 bp TGGCCTGATCCCGCTGCTCTGGGGCTGTCAATCCAGTaGCGGCAGCTGCTGCTCTGCCTGGAAAGGCTCCGC +
Preference number: 6 (lower is better)
Translates to: WPDPAALGLSIQ*RQLLLCLERLR
Trigger: GCGGAGCCTTTCCAGGCAGAGCAGCAGCTGCCGCCACTGGATTGACAGCCCCAGAGCAGCGGGATCAGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529652.1
CDS CCA 72 bp CTTCCTCCTGGGGCGCTCTGGGCAAACCGGGCTTCCTaGATGACAGCGAGTTTGGGCTGTGCAGCGCCAGGC +
Preference number: 6 (lower is better)
Translates to: LPPGALWANRAS*MTASLGCAAPG
Trigger: GCCTGGCGCTGCACAGCCCAAACTCGCTGTCATCCAGGAAGCCCGGTTTGCCCAGAGCGCCCCAGGAGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571160.1
CDS CCA 72 bp GATGTGAGTCCGGCCAGGTGCGTGGTCAGCTCCTCATaGCCAGATAGCCGGGGCAGCCACGAAGAGCGGGAG +
Preference number: 6 (lower is better)
Translates to: DVSPARCVVSSS*PDSRGSHEERE
Trigger: CTCCCGCTCTTCGTGGCTGCCCCGGCTATCTGGCCATGAGGAGCTGACCACGCACCTGGCCGGACTCACATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS GCA 72 bp GGCTCGGAAGGCCCACACTCTCCCAGGTATGTGGCCTaGAGGCGTGGGGCTATAGCCGTCCAGCCAGCTGAT +
Preference number: 6 (lower is better)
Translates to: GSEGPHSPRYVA*RRGAIAVQPAD
Trigger: ATCAGCTGGCTGGACGGCTATAGCCCCACGCCTGCAGGCCACATACCTGGGAGAGTGTGGGCCTTCCGAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529652.1
ENST00000571989.1
CDS GCA 72 bp CCCGGCTCCCCTGTGTCCTGCTCTGTGCCGATGCACTaGTCCCTCTGCAAGGGTCCTTGTGAGGGACATGGG +
Preference number: 6 (lower is better)
Translates to: PGSPVSCSVPMH*SLCKGPCEGHG
Trigger: CCCATGTCCCTCACAAGGACCCTTGCAGAGGGAGCAGTGCATCGGCACAGAGCAGGACACAGGGGAGCCGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529652.1
ENST00000571989.1
CDS GCA 72 bp CCGCTGCTCTGGGGCTGTCAATCCAGTGGCGGCAGCTaGTGCTCTGCCTGGAAAGGCTCCGCTTTGAGGCTG +
Preference number: 6 (lower is better)
Translates to: PLLWGCQSSGGS*CSAWKGSALRL
Trigger: CAGCCTCAAAGCGGAGCCTTTCCAGGCAGAGCAGCAGCTGCCGCCACTGGATTGACAGCCCCAGAGCAGCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529652.1
CDS CCA 72 bp CCAGTAGTGGTTGAGGCAGACAGGAGATGGCCCTGCTaGCTCGGCGAAGGAGTGGCTGCCGCTCGCTGCTCT +
Preference number: 6 (lower is better)
Translates to: PVVVEADRRWPC*LGEGVAAARCS
Trigger: AGAGCAGCGAGCGGCAGCCACTCCTTCGCCGAGCCAGCAGGGCCATCTCCTGTCTGCCTCAACCACTACTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS CAA 72 bp GCTACGCCCTGGTGCCTAGAGATGTGGGAGGGGGACTaGCCCACCTGTCCGTCAAGGGCCAGCCCTCTCAGA +
Preference number: 6 (lower is better)
Translates to: ATPWCLEMWEGD*PTCPSRASPLR
Trigger: TCTGAGAGGGCTGGCCCTTGACGGACAGGTGGGCAAGTCCCCCTCCCACATCTCTAGGCACCAGGGCGTAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS CAA 90 bp ATCAGGACCCCACCATCTCCAGCTTCCGGCACAGGCCAGTCCTCCTaGTGGGCGGCGGCATTTCTGGAAGACGCTGTCACCTCCCCAGGG +
Preference number: 6 (lower is better)
Translates to: IRTPPSPASGTGQSS*WAAAFLEDAVTSPG
Trigger: CCCTGGGGAGGTGACAGCGTCTTCCAGAAATGCCGCCGCCCACAAGGAGGACTGGCCTGTGCCGGAAGCTGGAGATGGTGGGGTCCTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529652.1
ENST00000624186.1
CDS CAA 90 bp ACATGGTACGCTACGCCCTGGTGCCTAGAGATGTGGGAGGGGGACTaGCCCACCTGTCCGTCAAGGGCCAGCCCTCTCAGACCACAGGCC +
Preference number: 6 (lower is better)
Translates to: TWYATPWCLEMWEGD*PTCPSRASPLRPQA
Trigger: GGCCTGTGGTCTGAGAGGGCTGGCCCTTGACGGACAGGTGGGCAAGTCCCCCTCCCACATCTCTAGGCACCAGGGCGTAGCGTACCATGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS TCA 72 bp TGTACGTGTTCGCTGGGGCCAGTCCGGCCACACTGGTaGCCGACACCGCTGGGATCTGGTGGACGACGTGAA +
Preference number: 6 (lower is better)
Translates to: CTCSLGPVRPHW*PTPLGSGGRRE
Trigger: TTCACGTCGTCCACCAGATCCCAGCGGTGTCGGTCACCAGTGTGGCCGGACTGGCCCCAGCGAACACGTACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335255.10
ENST00000473637.6
CDS GCA 72 bp AGGGAGGCCGATGCGGATGCGTGTGTTGCCAACATGTaGAAAGGACTCGCCGCGGCAGGTGCCATCAGGACC +
Preference number: 6 (lower is better)
Translates to: READADACVANM*KGLAAAGAIRT
Trigger: GGTCCTGATGGCACCTGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACACGCATCCGCATCGGCCTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529652.1
CDS GCA 72 bp CTTTGTGGGCAGGGAGGCCGATGCGGATGCGTGTGTTaGCAACATGTGCAAAGGACTCGCCGCGGCAGGTGC +
Preference number: 6 (lower is better)
Translates to: LCGQGGRCGCVC*QHVQRTRRGRC
Trigger: GCACCTGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACACGCATCCGCATCGGCCTCCCTGCCCACAAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529652.1
CDS GCA 72 bp GCAGGAACACACCCCTGGGAGGCCCCAAAGCAGCTGTaGAGCAACCACTTCAGGCTGTCCCAGGAGGCTCAG +
Preference number: 6 (lower is better)
Translates to: AGTHPWEAPKQL*SNHFRLSQEAQ
Trigger: CTGAGCCTCCTGGGACAGCCTGAAGTGGTTGCTGCACAGCTGCTTTGGGGCCTCCCAGGGGTGTGTTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS CCA 72 bp GGTCCTTGTGAGGGACATGGGACCGTAATTCCTCTGTaGGGCCGGGAGCCAGAAGGCTCGGAAGGCCCACAC +
Preference number: 6 (lower is better)
Translates to: GPCEGHGTVIPL*GREPEGSEGPH
Trigger: GTGTGGGCCTTCCGAGCCTTCTGGCTCCCGGCCCCACAGAGGAATTACGGTCCCATGTCCCTCACAAGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529652.1
ENST00000571989.1
CDS CCA 72 bp CCATCTCCAGCTTCCGGCACAGGCCAGTCCTCCTTGTaGGCGGCGGCATTTCTGGAAGACGCTGTCACCTCC +
Preference number: 6 (lower is better)
Translates to: PSPASGTGQSSL*AAAFLEDAVTS
Trigger: GGAGGTGACAGCGTCTTCCAGAAATGCCGCCGCCCACAAGGAGGACTGGCCTGTGCCGGAAGCTGGAGATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529652.1
ENST00000624186.1
CDS CCA 72 bp CACACATGGTACGCTACGCCCTGGTGCCTAGAGATGTaGGAGGGGGACTTGCCCACCTGTCCGTCAAGGGCC +
Preference number: 6 (lower is better)
Translates to: HTWYATPWCLEM*EGDLPTCPSRA
Trigger: GGCCCTTGACGGACAGGTGGGCAAGTCCCCCTCCCACATCTCTAGGCACCAGGGCGTAGCGTACCATGTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS CCA 72 bp ATCTGTCTCCAGGCCGCCGCCTTGGCTCTGTTTCTCTaGGGCACCCTCACCTACCAGGTGCCATCAGGACCC +
Preference number: 6 (lower is better)
Translates to: ICLQAAALALFL*GTLTYQVPSGP
Trigger: GGGTCCTGATGGCACCTGGTAGGTGAGGGTGCCCCAGAGAAACAGAGCCAAGGCGGCGGCCTGGAGACAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS CAA 72 bp GCTTTGTGGGCAGGGAGGCCGATGCGGATGCGTGTGTaGCCAACATGTGCAAAGGACTCGCCGCGGCAGGTG +
Preference number: 6 (lower is better)
Translates to: ALWAGRPMRMRV*PTCAKDSPRQV
Trigger: CACCTGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACACGCATCCGCATCGGCCTCCCTGCCCACAAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529652.1
CDS CAA 90 bp CGTTGTGGCGCTTTGTGGGCAGGGAGGCCGATGCGGATGCGTGTGTaGCCAACATGTGCAAAGGACTCGCCGCGGCAGGTGCCATCAGGA +
Preference number: 6 (lower is better)
Translates to: RCGALWAGRPMRMRV*PTCAKDSPRQVPSG
Trigger: TCCTGATGGCACCTGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACACGCATCCGCATCGGCCTCCCTGCCCACAAAGCGCCACAACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529652.1
CDS CAA 90 bp CGTTGTGGCGCTTTGTGGGCAGGGAGGCCGATGCGGATGCGTGTGTaGCCAACATGTGCAAAGGACTCGCCGCGGCCCAAATCTGGCTGC +
Preference number: 6 (lower is better)
Translates to: RCGALWAGRPMRMRV*PTCAKDSPRPKSGC
Trigger: GCAGCCAGATTTGGGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACACGCATCCGCATCGGCCTCCCTGCCCACAAAGCGCCACAACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571989.1
CDS CAA 90 bp CGTTGTGGCGCTTTGTGGGCAGGGAGGCCGATGCGGATGCGTGTGTaGCCAACATGTGCAAAGGACTCGCCGCGGCATTGTTCACCTGGC +
Preference number: 6 (lower is better)
Translates to: RCGALWAGRPMRMRV*PTCAKDSPRHCSPG
Trigger: GCCAGGTGAACAATGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACACGCATCCGCATCGGCCTCCCTGCCCACAAAGCGCCACAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS TCA 72 bp ATGGGGCCTGCTGTGTCAACTGAGGCAACTCCAGTCTaGGCTGGCACATGGGGGCCTTCTGAGGCCAAGGGG +
Preference number: 6 (lower is better)
Translates to: MGPAVSTEATPV*AGTWGPSEAKG
Trigger: CCCCTTGGCCTCAGAAGGCCCCCATGTGCCAGCTCAGACTGGAGTTGCCTCAGTTGACACAGCAGGCCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473637.6
ENST00000529652.1
CDS TCA 72 bp CACTGCTGGGGGAGAAAGGCTGAGTCCAGTAGTGGTTaGGGCAGACAGGAGATGGCCCTGCTGGCTCGGCGA +
Preference number: 6 (lower is better)
Translates to: HCWGRKAESSSG*GRQEMALLARR
Trigger: TCGCCGAGCCAGCAGGGCCATCTCCTGTCTGCCTCAACCACTACTGGACTCAGCCTTTCTCCCCCAGCAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS GCA 72 bp AGGGAGGCCGATGCGGATGCGTGTGTTGCCAACATGTaGAAAGGACTCGCCGCGGCATTGTTCACCTGGCCG +
Preference number: 6 (lower is better)
Translates to: READADACVANM*KGLAAALFTWP
Trigger: CGGCCAGGTGAACAATGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACACGCATCCGCATCGGCCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS GCA 72 bp ACAGTCAGAACCGAAACCACGAGTGAGAAGGGGCTCTaGTCCCAGTACCCACAGCCACGGGGAGCCACCGAC +
Preference number: 6 (lower is better)
Translates to: TVRTETTSEKGL*SQYPQPRGATD
Trigger: GTCGGTGGCTCCCCGTGGCTGTGGGTACTGGGAGCAGAGCCCCTTCTCACTCGTGGTTTCGGTTCTGACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575578.1
CDS GCA 72 bp AGGGAGGCCGATGCGGATGCGTGTGTTGCCAACATGTaGAAAGGACTCGCCGCGGCCCAAATCTGGCTGCCA +
Preference number: 6 (lower is better)
Translates to: READADACVANM*KGLAAAQIWLP
Trigger: TGGCAGCCAGATTTGGGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACACGCATCCGCATCGGCCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571989.1
CDS GCA 72 bp TGGCTCTGTTTCTCTGGGGCACCCTCACCTACCAGGTaGCATCAGGACCCCACCATCTCCAGCTTCCGGCAC +
Preference number: 6 (lower is better)
Translates to: WLCFSGAPSPTR*HQDPTISSFRH
Trigger: GTGCCGGAAGCTGGAGATGGTGGGGTCCTGATGGCACCTGGTAGGTGAGGGTGCCCCAGAGAAACAGAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS CCA 72 bp ATAGCCGGGGCAGCCACGAAGAGCGGGAGTCAACACTaGGCTCCGAAGAGACTCAAGCAGCAAACGGGGACC +
Preference number: 6 (lower is better)
Translates to: IAGAATKSGSQH*APKRLKQQTGT
Trigger: GGTCCCCGTTTGCTGCTTGAGTCTCTTCGGAGCCCAGTGTTGACTCCCGCTCTTCGTGGCTGCCCCGGCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS CAA 72 bp CAGCCACGGGGAGCCACCGACCAGCATGTCTTACCATaGTTCACCTGGCCGTGGACCGCAGTGGGGACTGAT +
Preference number: 6 (lower is better)
Translates to: QPRGATDQHVLP*FTWPWTAVGTD
Trigger: ATCAGTCCCCACTGCGGTCCACGGCCAGGTGAACAATGGTAAGACATGCTGGTCGGTGGCTCCCCGTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575578.1
CDS CAA 72 bp GCTTTGTGGGCAGGGAGGCCGATGCGGATGCGTGTGTaGCCAACATGTGCAAAGGACTCGCCGCGGCCCAAA +
Preference number: 6 (lower is better)
Translates to: ALWAGRPMRMRV*PTCAKDSPRPK
Trigger: TTTGGGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACACGCATCCGCATCGGCCTCCCTGCCCACAAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571989.1
CDS CAA 90 bp CAATCCAGTGGCGGCAGCTGCTGCTCTGCCTGGAAAGGCTCCGCTTaGAGGCTGGGTGTGAAAGACGTCCAGGGACCCTCAGACGTCACT +
Preference number: 6 (lower is better)
Translates to: QSSGGSCCSAWKGSA*RLGVKDVQGPSDVT
Trigger: AGTGACGTCTGAGGGTCCCTGGACGTCTTTCACACCCAGCCTCAAAGCGGAGCCTTTCCAGGCAGAGCAGCAGCTGCCGCCACTGGATTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529652.1
CDS CAA 90 bp GGGTTCTCACGGCAGAACCAGGTGGACACAAACAGGGCAAGGTGCTaGGATGCCAAGTGGCTCCGCCATCTCTGCTGGGCTCTGCACACG +
Preference number: 6 (lower is better)
Translates to: GFSRQNQVDTNRARC*DAKWLRHLCWALHT
Trigger: CGTGTGCAGAGCCCAGCAGAGATGGCGGAGCCACTTGGCATCCAAGCACCTTGCCCTGTTTGTGTCCACCTGGTTCTGCCGTGAGAACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531030.5
CDS TCA 72 bp TGTGCCGATGCACTGCTCCCTCTGCAAGGGTCCTTGTaGGGGACATGGGACCGTAATTCCTCTGTGGGGCCG +
Preference number: 6 (lower is better)
Translates to: CADALLPLQGSL*GTWDRNSSVGP
Trigger: CGGCCCCACAGAGGAATTACGGTCCCATGTCCCTCACAAGGACCCTTGCAGAGGGAGCAGTGCATCGGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529652.1
ENST00000571989.1
CDS GCA 72 bp TTGTACTATGGTCACCGTCTGGACCGGGGTGGTCTGTaGCGTCTGAATGATCCGGCTGGCAGTGCCGAGCGT +
Preference number: 6 (lower is better)
Translates to: LYYGHRLDRGGL*RLNDPAGSAER
Trigger: ACGCTCGGCACTGCCAGCCGGATCATTCAGACGGCACAGACCACCCCGGTCCAGACGGTGACCATAGTACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335255.10
ENST00000473637.6
ENST00000575578.1
CDS GCA 72 bp CTTTGTGGGCAGGGAGGCCGATGCGGATGCGTGTGTTaGCAACATGTGCAAAGGACTCGCCGCGGCCCAAAT +
Preference number: 6 (lower is better)
Translates to: LCGQGGRCGCVC*QHVQRTRRGPN
Trigger: ATTTGGGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACACGCATCCGCATCGGCCTCCCTGCCCACAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571989.1
CDS GCA 72 bp GGTCCTAGGCCCCTAGGCTGCGCACACACCAGCCACTaGACTTCTCTAACCCAAGACCAACTCAGAGCACCC +
Preference number: 6 (lower is better)
Translates to: GPRPLGCAHTSH*TSLTQDQLRAP
Trigger: GGGTGCTCTGAGTTGGTCTTGGGTTAGAGAAGTGCAGTGGCTGGTGTGTGCGCAGCCTAGGGGCCTAGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS GCA 72 bp AGGGAGGCCGATGCGGATGCGTGTGTTGCCAACATGTaGAAAGGACTCGCCGCGGCTGAAATGACACGAGGG +
Preference number: 6 (lower is better)
Translates to: READADACVANM*KGLAAAEMTRG
Trigger: CCCTCGTGTCATTTCAGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACACGCATCCGCATCGGCCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS CCA 72 bp GGAGGGCAGAGGGCTGATGAGGTGGGCCATGGTGTCTaGAATGTTGATGGTCAGGGGCGAGATGTGTGGCTG +
Preference number: 6 (lower is better)
Translates to: GGQRADEVGHGV*NVDGQGRDVWL
Trigger: CAGCCACACATCTCGCCCCTGACCATCAACATTCCAGACACCATGGCCCACCTCATCAGCCCTCTGCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335255.10
ENST00000473637.6
ENST00000526383.2
ENST00000527313.6
ENST00000531030.5
ENST00000570585.1
CDS CCA 72 bp TCGCCGCGGCATTGTTCACCTGGCCGTGGACCGCAGTaGGGACTGATGCCACGTGAGTGCCGTTTTGTGTTA +
Preference number: 6 (lower is better)
Translates to: SPRHCSPGRGPQ*GLMPRECRFVL
Trigger: TAACACAAAACGGCACTCACGTGGCATCAGTCCCCACTGCGGTCCACGGCCAGGTGAACAATGCCGCGGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS CCA 72 bp GCAGATTCCACAGAATCTGTCTCCAGGCCGCCGCCTTaGCTCTGTTTCTCTGGGGCACCCTCACCTACCAGG +
Preference number: 6 (lower is better)
Translates to: ADSTESVSRPPP*LCFSGAPSPTR
Trigger: CCTGGTAGGTGAGGGTGCCCCAGAGAAACAGAGCCAAGGCGGCGGCCTGGAGACAGATTCTGTGGAATCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS CCA 72 bp CTGCAGATGCTGAGCTTGGCAGGCCCCACAACAGAGTaGGCAGATTCCACAGAATCTGTCTCCAGGCCGCCG +
Preference number: 6 (lower is better)
Translates to: LQMLSLAGPTTE*ADSTESVSRPP
Trigger: CGGCGGCCTGGAGACAGATTCTGTGGAATCTGCCCACTCTGTTGTGGGGCCTGCCAAGCTCAGCATCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS CAA 72 bp GCTTTGTGGGCAGGGAGGCCGATGCGGATGCGTGTGTaGCCAACATGTGCAAAGGACTCGCCGCGGCATTGT +
Preference number: 6 (lower is better)
Translates to: ALWAGRPMRMRV*PTCAKDSPRHC
Trigger: ACAATGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACACGCATCCGCATCGGCCTCCCTGCCCACAAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS CAA 72 bp GGCAGATTCCACAGAATCTGTCTCCAGGCCGCCGCCTaGGCTCTGTTTCTCTGGGGCACCCTCACCTACCAG +
Preference number: 6 (lower is better)
Translates to: GRFHRICLQAAA*ALFLWGTLTYQ
Trigger: CTGGTAGGTGAGGGTGCCCCAGAGAAACAGAGCCAAGGCGGCGGCCTGGAGACAGATTCTGTGGAATCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS CAA 72 bp GCTTTGTGGGCAGGGAGGCCGATGCGGATGCGTGTGTaGCCAACATGTGCAAAGGACTCGCCGCGGCTGAAA +
Preference number: 6 (lower is better)
Translates to: ALWAGRPMRMRV*PTCAKDSPRLK
Trigger: TTTCAGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACACGCATCCGCATCGGCCTCCCTGCCCACAAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS CAA 90 bp GAATGTGCACGGCAGAACCAGGTGGACACAAACAGGGCAAGGTGCTaGGATGCCAAGTGGCTCCGCCATCTCTGCTGGGCTCTGCACACG +
Preference number: 6 (lower is better)
Translates to: ECARQNQVDTNRARC*DAKWLRHLCWALHT
Trigger: CGTGTGCAGAGCCCAGCAGAGATGGCGGAGCCACTTGGCATCCAAGCACCTTGCCCTGTTTGTGTCCACCTGGTTCTGCCGTGCACATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526383.2
CDS GCA 72 bp GGCTGTACGGCCTTCACTGGAGACTCAGACGCCTCCTaGTTCTCTCTCTTCTCGCTGGACAGGGCAGTGAAC +
Preference number: 6 (lower is better)
Translates to: GCTAFTGDSDAS*FSLFSLDRAVN
Trigger: GTTCACTGCCCTGTCCAGCGAGAAGAGAGAGAAGCAGGAGGCGTCTGAGTCTCCAGTGAAGGCCGTACAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335255.10
ENST00000473637.6
ENST00000526383.2
ENST00000527313.6
ENST00000531030.5
ENST00000570585.1
CDS GCA 72 bp CTTTGTGGGCAGGGAGGCCGATGCGGATGCGTGTGTTaGCAACATGTGCAAAGGACTCGCCGCGGCATTGTT +
Preference number: 6 (lower is better)
Translates to: LCGQGGRCGCVC*QHVQRTRRGIV
Trigger: AACAATGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACACGCATCCGCATCGGCCTCCCTGCCCACAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS CCA 72 bp CAAGGGGCCCATTGTTCACCTGGCCGTGGACCGCAGTaGGGACTGATGCCACGTGAGTGCCGTTTTGTGTTA +
Preference number: 6 (lower is better)
Translates to: QGAHCSPGRGPQ*GLMPRECRFVL
Trigger: TAACACAAAACGGCACTCACGTGGCATCAGTCCCCACTGCGGTCCACGGCCAGGTGAACAATGGGCCCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS CCA 72 bp TGTCCTTCACGTTTGTCACTGATCGTCCTCCAAGCCTaGGCCATGGGGATGCCACAGAAGGCCCCTGCAGTG +
Preference number: 6 (lower is better)
Translates to: CPSRLSLIVLQA*AMGMPQKAPAV
Trigger: CACTGCAGGGGCCTTCTGTGGCATCCCCATGGCCCAGGCTTGGAGGACGATCAGTGACAAACGTGAAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574694.1
CDS CCA 72 bp CAACCACAAACACAGCACACATGGTACGCTACGCCCTaGTGCCTAGAGATGTGGGAGGGGGACTTGCCCACC +
Preference number: 6 (lower is better)
Translates to: QPQTQHTWYATP*CLEMWEGDLPT
Trigger: GGTGGGCAAGTCCCCCTCCCACATCTCTAGGCACCAGGGCGTAGCGTACCATGTGTGCTGTGTTTGTGGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS CAA 90 bp AACAGAGTGGGCAGATTCCACAGAATCTGTCTCCAGGCCGCCGCCTaGGCTCTGTTTCTCTGGGGCACCCTCACCTACCAGGTGCCATCA +
Preference number: 6 (lower is better)
Translates to: NRVGRFHRICLQAAA*ALFLWGTLTYQVPS
Trigger: TGATGGCACCTGGTAGGTGAGGGTGCCCCAGAGAAACAGAGCCAAGGCGGCGGCCTGGAGACAGATTCTGTGGAATCTGCCCACTCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS CAA 90 bp CAGCACCCTGCCCTTCCCTTCACCTGGTGTCCACAGTGGGCGGGATaGCCTGCTTGGTGGCTTTCCTCTAGAAGTGTCCTTCACGTTTGT +
Preference number: 6 (lower is better)
Translates to: QHPALPFTWCPQWAG*PAWWLSSRSVLHVC
Trigger: ACAAACGTGAAGGACACTTCTAGAGGAAAGCCACCAAGCAGGCAATCCCGCCCACTGTGGACACCAGGTGAAGGGAAGGGCAGGGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574694.1
CDS TCA 72 bp GTGTGTTGCCAACATGTGCAAAGGACTCGCCGCGGCTaGAATGACACGAGGGAGTCAGAACCCCACGCTCTC +
Preference number: 6 (lower is better)
Translates to: VCCQHVQRTRRG*NDTRESEPHAL
Trigger: GAGAGCGTGGGGTTCTGACTCCCTCGTGTCATTTCAGCCGCGGCGAGTCCTTTGCACATGTTGGCAACACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS GCA 72 bp CCCTTCCCTTCACCTGGTGTCCACAGTGGGCGGGATTaGCTGCTTGGTGGCTTTCCTCTAGAAGTGTCCTTC +
Preference number: 6 (lower is better)
Translates to: PFPSPGVHSGRD*LLGGFPLEVSF
Trigger: GAAGGACACTTCTAGAGGAAAGCCACCAAGCAGGCAATCCCGCCCACTGTGGACACCAGGTGAAGGGAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574694.1
CDS CCA 72 bp GGTGTCTGGAATGTTGATGGTCAGGGGCGAGATGTGTaGCTGTACGGCCTTCACTGGAGACTCAGACGCCTC +
Preference number: 6 (lower is better)
Translates to: GVWNVDGQGRDV*LYGLHWRLRRL
Trigger: GAGGCGTCTGAGTCTCCAGTGAAGGCCGTACAGCCACACATCTCGCCCCTGACCATCAACATTCCAGACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335255.10
ENST00000473637.6
ENST00000526383.2
ENST00000527313.6
ENST00000531030.5
ENST00000570585.1
CDS CCA 72 bp GTAGCTGGTGTTGACCTAGAGGTGCCTGTTGTACTATaGTCACCGTCTGGACCGGGGTGGTCTGTGCCGTCT +
Preference number: 6 (lower is better)
Translates to: VAGVDLEVPVVL*SPSGPGWSVPS
Trigger: AGACGGCACAGACCACCCCGGTCCAGACGGTGACCATAGTACAACAGGCACCTCTAGGTCAACACCAGCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335255.10
ENST00000473637.6
ENST00000575578.1
CDS CCA 72 bp AGGGATACCCACATCATCAAATCCTCACCCCAAATCTaGCTGCCAGATCCCCACCGAGGCACGCGTGAGCAC +
Preference number: 6 (lower is better)
Translates to: RDTHIIKSSPQI*LPDPHRGTREH
Trigger: GTGCTCACGCGTGCCTCGGTGGGGATCTGGCAGCCAGATTTGGGGTGAGGATTTGATGATGTGGGTATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529652.1
CDS CCA 72 bp CCTGGGCCATGGGGATGCCACAGAAGGCCCCTGCAGTaGGGAAGTTGTGTGAACAACTCCAAGACTCCTTTG +
Preference number: 6 (lower is better)
Translates to: PGPWGCHRRPLQ*GSCVNNSKTPL
Trigger: CAAAGGAGTCTTGGAGTTGTTCACACAACTTCCCCACTGCAGGGGCCTTCTGTGGCATCCCCATGGCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574694.1
CDS TCA 72 bp GGAGGCTCAGAGCAGACACGCCTACAGGGCAGTACCTaGACCCAACCACAAACACAGCACACATGGTACGCT +
Preference number: 6 (lower is better)
Translates to: GGSEQTRLQGST*TQPQTQHTWYA
Trigger: AGCGTACCATGTGTGCTGTGTTTGTGGTTGGGTTCAGGTACTGCCCTGTAGGCGTGTCTGCTCTGAGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS GCA 72 bp GCCGGAAAAGGCTTTGCTCTTGTCTCCAGAAGCACCTaGTGGTCTGTCTGGATGGGGCCTGCTGTGTCAACT +
Preference number: 6 (lower is better)
Translates to: AGKGFALVSRST*WSVWMGPAVST
Trigger: AGTTGACACAGCAGGCCCCATCCAGACAGACCAGCAGGTGCTTCTGGAGACAAGAGCAAAGCCTTTTCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473637.6
ENST00000529652.1
CDS CCA 72 bp TGGGAAAGAGCATCCTTTCCTCACCTTCCCGGTTCCTaGAGTCTAGGACTACCTCTTGTCTCCCCAGCACCC +
Preference number: 6 (lower is better)
Translates to: WERASFPHLPGS*SLGLPLVSPAP
Trigger: GGGTGCTGGGGAGACAAGAGGTAGTCCTAGACTCCAGGAACCGGGAAGGTGAGGAAAGGATGCTCTTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574694.1
CDS CAA 90 bp TCCTGCTTCTCTCTCTTCTCGCTGGACAGGGCAGTGAACGTTATCTaGATGTTTGTGCTCGGGAACCTGAATGTGCACACGCGCGGCAGC +
Preference number: 6 (lower is better)
Translates to: SCFSLFSLDRAVNVI*MFVLGNLNVHTRGS
Trigger: GCTGCCGCGCGTGTGCACATTCAGGTTCCCGAGCACAAACATCAAGATAACGTTCACTGCCCTGTCCAGCGAGAAGAGAGAGAAGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335255.10
ENST00000473637.6
ENST00000527313.6
ENST00000570585.1
CDS TCA 72 bp GGCATTGTTCACCTGGCCGTGGACCGCAGTGGGGACTaGTGCCACGTGAGTGCCGTTTTGTGTTACAGTTTT +
Preference number: 6 (lower is better)
Translates to: GIVHLAVDRSGD*CHVSAVLCYSF
Trigger: AAAACTGTAACACAAAACGGCACTCACGTGGCATCAGTCCCCACTGCGGTCCACGGCCAGGTGAACAATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335255.10
CDS TCA 72 bp CCCATTGTTCACCTGGCCGTGGACCGCAGTGGGGACTaGTGCCACGTGAGTGCCGTTTTGTGTTACAGTTTT +
Preference number: 6 (lower is better)
Translates to: PIVHLAVDRSGD*CHVSAVLCYSF
Trigger: AAAACTGTAACACAAAACGGCACTCACGTGGCATCAGTCCCCACTGCGGTCCACGGCCAGGTGAACAATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473637.6
CDS TCA 72 bp TGGCTTTCCTCTAGAAGTGTCCTTCACGTTTGTCACTaGTCGTCCTCCAAGCCTGGGCCATGGGGATGCCAC +
Preference number: 6 (lower is better)
Translates to: WLSSRSVLHVCH*SSSKPGPWGCH
Trigger: GTGGCATCCCCATGGCCCAGGCTTGGAGGACGATCAGTGACAAACGTGAAGGACACTTCTAGAGGAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574694.1
CDS GCA 72 bp GGGTGTGAAAGACGTCCAGGGACCCTCAGACGTCACTaGCGTTTTACATGCTCACAACGCAACACCCATCGT +
Preference number: 6 (lower is better)
Translates to: GCERRPGTLRRH*RFTCSQRNTHR
Trigger: ACGATGGGTGTTGCGTTGTGAGCATGTAAAACGGCAGTGACGTCTGAGGGTCCCTGGACGTCTTTCACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529652.1
CDS CCA 72 bp TTTGCTCTTGTCTCCAGAAGCACCTGCTGGTCTGTCTaGATGGGGCCTGCTGTGTCAACTGAGGCAACTCCA +
Preference number: 6 (lower is better)
Translates to: FALVSRSTCWSV*MGPAVSTEATP
Trigger: TGGAGTTGCCTCAGTTGACACAGCAGGCCCCATCCAGACAGACCAGCAGGTGCTTCTGGAGACAAGAGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473637.6
ENST00000529652.1
CDS CCA 72 bp GGAAAAGGCTTTGCTCTTGTCTCCAGAAGCACCTGCTaGTCTGTCTGGATGGGGCCTGCTGTGTCAACTGAG +
Preference number: 6 (lower is better)
Translates to: GKGFALVSRSTC*SVWMGPAVSTE
Trigger: CTCAGTTGACACAGCAGGCCCCATCCAGACAGACCAGCAGGTGCTTCTGGAGACAAGAGCAAAGCCTTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473637.6
ENST00000529652.1
CDS CCA 72 bp ACCTGGTGTCCACAGTGGGCGGGATTGCCTGCTTGGTaGCTTTCCTCTAGAAGTGTCCTTCACGTTTGTCAC +
Preference number: 6 (lower is better)
Translates to: TWCPQWAGLPAW*LSSRSVLHVCH
Trigger: GTGACAAACGTGAAGGACACTTCTAGAGGAAAGCCACCAAGCAGGCAATCCCGCCCACTGTGGACACCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574694.1
CDS TCA 72 bp ACCATTGTTCACCTGGCCGTGGACCGCAGTGGGGACTaGTGCCACGTGAGTGCCGTTTTGTGTTACAGTTTT +
Preference number: 6 (lower is better)
Translates to: TIVHLAVDRSGD*CHVSAVLCYSF
Trigger: AAAACTGTAACACAAAACGGCACTCACGTGGCATCAGTCCCCACTGCGGTCCACGGCCAGGTGAACAATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575578.1
CDS TCA 72 bp TGTGGTAGCTGCCGCTGGACGGTGATTAAGACTGGCTaGCTGGACAGAGGTGACCCTAGGATCAACATCTTC +
Preference number: 6 (lower is better)
Translates to: CGSCRWTVIKTG*LDRGDPRINIF
Trigger: GAAGATGTTGATCCTAGGGTCACCTCTGTCCAGTCAGCCAGTCTTAATCACCGTCCAGCGGCAGCTACCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571160.1
CDS CCA 72 bp ATGTCTTACCATTGTTCACCTGGCCGTGGACCGCAGTaGGGACTGATGCCACGTGAGTGCCGTTTTGTGTTA +
Preference number: 6 (lower is better)
Translates to: MSYHCSPGRGPQ*GLMPRECRFVL
Trigger: TAACACAAAACGGCACTCACGTGGCATCAGTCCCCACTGCGGTCCACGGCCAGGTGAACAATGGTAAGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575578.1
CDS CCA 72 bp TTCACCTGGTGTCCACAGTGGGCGGGATTGCCTGCTTaGTGGCTTTCCTCTAGAAGTGTCCTTCACGTTTGT +
Preference number: 6 (lower is better)
Translates to: FTWCPQWAGLPA*WLSSRSVLHVC
Trigger: ACAAACGTGAAGGACACTTCTAGAGGAAAGCCACCAAGCAGGCAATCCCGCCCACTGTGGACACCAGGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574694.1
CDS CAA 90 bp TCCTGCTTCTCTCTCTTCTCGCTGGACAGGGCAGTGAACGTTATCTaGATGTTTGTGCTCGGGAACCTGAATGTGCACGGCAGAACCAGG +
Preference number: 6 (lower is better)
Translates to: SCFSLFSLDRAVNVI*MFVLGNLNVHGRTR
Trigger: CCTGGTTCTGCCGTGCACATTCAGGTTCCCGAGCACAAACATCAAGATAACGTTCACTGCCCTGTCCAGCGAGAAGAGAGAGAAGCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526383.2
CDS CAA 90 bp TCCTGCTTCTCTCTCTTCTCGCTGGACAGGGCAGTGAACGTTATCTaGATGTTTGTGCTCGGGAACCTGAATGTGCACCAGCCTAACGGC +
Preference number: 6 (lower is better)
Translates to: SCFSLFSLDRAVNVI*MFVLGNLNVHQPNG
Trigger: GCCGTTAGGCTGGTGCACATTCAGGTTCCCGAGCACAAACATCAAGATAACGTTCACTGCCCTGTCCAGCGAGAAGAGAGAGAAGCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531030.5
CDS CCA 72 bp ATCTGTCCCATAGGAGAGAAGCACCACAGTTTCTCATaGATGCTGCTCACCTGTGTCCTGGGTCAGTCCACA +
Preference number: 6 (lower is better)
Translates to: ICPIGEKHHSFS*MLLTCVLGQST
Trigger: TGTGGACTGACCCAGGACACAGGTGAGCAGCATCCATGAGAAACTGTGGTGCTTCTCTCCTATGGGACAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS CAA 72 bp TCTCTCTTCTCGCTGGACAGGGCAGTGAACGTTATCTaGATGTTTGTGCTCGGGAACCTGAATGTGCACGGC +
Preference number: 6 (lower is better)
Translates to: SLFSLDRAVNVI*MFVLGNLNVHG
Trigger: GCCGTGCACATTCAGGTTCCCGAGCACAAACATCAAGATAACGTTCACTGCCCTGTCCAGCGAGAAGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526383.2
CDS CAA 90 bp GGCACGCCCCTAGGCCGTCGTTTCCTAAAAGCCTGTTCTATTAATTaGCTTTCAGAGGCTGGGTCTATCCTCCAGAACGAGCCTTTGCCT +
Preference number: 6 (lower is better)
Translates to: GTPLGRRFLKACSIN*LSEAGSILQNEPLP
Trigger: AGGCAAAGGCTCGTTCTGGAGGATAGACCCAGCCTCTGAAAGCAAATTAATAGAACAGGCTTTTAGGAAACGACGGCCTAGGGGCGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335255.10
ENST00000473637.6
ENST00000526383.2
ENST00000531030.5
ENST00000571160.1
CDS TCA 72 bp CCTGGAAGCCAAACCCCTGTCAACAGTGTGGATGTGTaGCTTTATCGTGTTCCCTTCTCCTTTCCACCTCTG +
Preference number: 6 (lower is better)
Translates to: PGSQTPVNSVDV*LYRVPFSFPPL
Trigger: CAGAGGTGGAAAGGAGAAGGGAACACGATAAAGTCACACATCCACACTGTTGACAGGGGTTTGGCTTCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS CCA 72 bp CAGTCAGCTCTGAGTAAATCAGCTGATCGCCATGAGTaGGTGGGCCTCATCCAATCAGGTGAAGGACTAAGA +
Preference number: 6 (lower is better)
Translates to: QSALSKSADRHE*VGLIQSGEGLR
Trigger: TCTTAGTCCTTCACCTGATTGGATGAGGCCCACCCACTCATGGCGATCAGCTGATTTACTCAGAGCTGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS CAA 72 bp TCTCTCTTCTCGCTGGACAGGGCAGTGAACGTTATCTaGATGTTTGTGCTCGGGAACCTGAATGTGCACACG +
Preference number: 6 (lower is better)
Translates to: SLFSLDRAVNVI*MFVLGNLNVHT
Trigger: CGTGTGCACATTCAGGTTCCCGAGCACAAACATCAAGATAACGTTCACTGCCCTGTCCAGCGAGAAGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335255.10
ENST00000473637.6
ENST00000527313.6
ENST00000570585.1
CDS CAA 72 bp TCTCTCTTCTCGCTGGACAGGGCAGTGAACGTTATCTaGATGTTTGTGCTCGGGAACCTGAATGTGCACCAG +
Preference number: 6 (lower is better)
Translates to: SLFSLDRAVNVI*MFVLGNLNVHQ
Trigger: CTGGTGCACATTCAGGTTCCCGAGCACAAACATCAAGATAACGTTCACTGCCCTGTCCAGCGAGAAGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531030.5
CDS TCA 72 bp TTCTCGGTATCCATCAGCCTCTATTTAACAACAAACTaGAGGCATTTACCTGCCAGCCCTTGTCCGCAGTCC +
Preference number: 6 (lower is better)
Translates to: FSVSISLYLTTN*RHLPASPCPQS
Trigger: GGACTGCGGACAAGGGCTGGCAGGTAAATGCCTTCAGTTTGTTGTTAAATAGAGGCTGATGGATACCGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527313.6
ENST00000570585.1
CDS CCA 72 bp TTTTACATGCTCACAACGCAACACCCATCGTCACTGTaGGACCAGCTAGGGATACCCACATCATCAAATCCT +
Preference number: 6 (lower is better)
Translates to: FYMLTTQHPSSL*DQLGIPTSSNP
Trigger: AGGATTTGATGATGTGGGTATCCCTAGCTGGTCCCACAGTGACGATGGGTGTTGCGTTGTGAGCATGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529652.1
CDS CCA 72 bp TTAATTCCAAAGGCCAAGCTTCCAACTAACATGCGATaGGTAATGTTATGTGCCAGCCTGGCTGAGCCACAG +
Preference number: 6 (lower is better)
Translates to: LIPKAKLPTNMR*VMLCASLAEPQ
Trigger: CTGTGGCTCAGCCAGGCTGGCACATAACATTACCCATCGCATGTTAGTTGGAAGCTTGGCCTTTGGAATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS CAA 90 bp GAAGCTTCCTTTTCATTTTCAGGCTGTGAGTTGTCAGCCATTAAATaGAGGTCAGATGGCATCACTCGGCCCACCTTGTACCCTGAAGAC +
Preference number: 6 (lower is better)
Translates to: EASFSFSGCELSAIK*RSDGITRPTLYPED
Trigger: GTCTTCAGGGTACAAGGTGGGCCGAGTGATGCCATCTGACCTCAATTTAATGGCTGACAACTCACAGCCTGAAAATGAAAAGGAAGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335255.10
ENST00000473637.6
ENST00000526383.2
ENST00000531030.5
ENST00000570585.1
CDS TCA 72 bp TTTCATTTTCAGGCTGTGAGTTGTCAGCCATTAAATTaGGGTCAGATGGCATCACTCGGCCCACCTTGTACC +
Preference number: 6 (lower is better)
Translates to: FHFQAVSCQPLN*GQMASLGPPCT
Trigger: GGTACAAGGTGGGCCGAGTGATGCCATCTGACCTCAATTTAATGGCTGACAACTCACAGCCTGAAAATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335255.10
ENST00000473637.6
ENST00000526383.2
ENST00000531030.5
ENST00000570585.1
CDS CCA 72 bp GACAGGAGTTGTGACTTAGCACCTATCGTGTCTGTGTaGTTTGAGCATCTGCAAGAGTTCTCAGTAGTTGTC +
Preference number: 6 (lower is better)
Translates to: DRSCDLAPIVSV*FEHLQEFSVVV
Trigger: GACAACTACTGAGAACTCTTGCAGATGCTCAAACCACACAGACACGATAGGTGCTAAGTCACAACTCCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574694.1
CDS TCA 72 bp CCGTTTTGTGTTACAGTTTTTATTGGTAGCTGGTGTTaGCCTAGAGGTGCCTGTTGTACTATGGTCACCGTC +
Preference number: 6 (lower is better)
Translates to: PFCVTVFIGSWC*PRGACCTMVTV
Trigger: GACGGTGACCATAGTACAACAGGCACCTCTAGGTCAACACCAGCTACCAATAAAAACTGTAACACAAAACGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335255.10
ENST00000473637.6
ENST00000575578.1
CDS CAA 72 bp TTTTCATTTTCAGGCTGTGAGTTGTCAGCCATTAAATaGAGGTCAGATGGCATCACTCGGCCCACCTTGTAC +
Preference number: 6 (lower is better)
Translates to: FSFSGCELSAIK*RSDGITRPTLY
Trigger: GTACAAGGTGGGCCGAGTGATGCCATCTGACCTCAATTTAATGGCTGACAACTCACAGCCTGAAAATGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335255.10
ENST00000473637.6
ENST00000526383.2
ENST00000531030.5
ENST00000570585.1
CDS TCA 72 bp TGTGACTTTATCGTGTTCCCTTCTCCTTTCCACCTCTaGGCAACAGAAATAGCAGAGGACCAATTTACACAT +
Preference number: 6 (lower is better)
Translates to: CDFIVFPSPFHL*ATEIAEDQFTH
Trigger: ATGTGTAAATTGGTCCTCTGCTATTTCTGTTGCTCAGAGGTGGAAAGGAGAAGGGAACACGATAAAGTCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624186.1
CDS CCA 72 bp AAGTGCTTTATTCAGTTTCTAACAGTGCTGTTTATTTaGACCATTAACAGCCTGCTGTGTGACTTGGAGGCA +
Preference number: 6 (lower is better)
Translates to: KCFIQFLTVLFI*TINSLLCDLEA
Trigger: TGCCTCCAAGTCACACAGCAGGCTGTTAATGGTCCAAATAAACAGCACTGTTAGAAACTGAATAAAGCACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574694.1