Pregenerated sensors for FOXI2 (Homo sapiens)
Ensembl gene IDs: ENSG00000186766Ensembl transcript IDs: ENST00000388920.5
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGGCCACCCACCCCAAAGCCCAAGAGCCGCTCAGCCCAGCTCCCTaGTGGCCGAGCCGCCCCCGGCTCTGCGCTTCCTCCCAGGGCACC | + |
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Preference number: 1 (lower is better) Translates to: RATHPKAQEPLSPAP*WPSRPRLCASSQGT Trigger: GGTGCCCTGGGAGGAAGCGCAGAGCCGGGGGCGGCTCGGCCAGCAGGGAGCTGGGCTGAGCGGCTCTTGGGCTTTGGGGTGGGTGGCCCT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR GCA 90 bp | GAGCCGCTCAGCCCAGCTCCCTGCTGGCCGAGCCGCCCCCGGCTCTaGGCTTCCTCCCAGGGCACCAAGGCCTTCAACGCCAACACGTGG | + |
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Preference number: 1 (lower is better) Translates to: EPLSPAPCWPSRPRL*ASSQGTKAFNANTW Trigger: CCACGTGTTGGCGTTGAAGGCCTTGGTGCCCTGGGAGGAAGCGCAGAGCCGGGGGCGGCTCGGCCAGCAGGGAGCTGGGCTGAGCGGCTC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR CCA 90 bp | GAGTGTGGGTGTGGGTGGCACAAACCTGGACCCTTGGGGAACTCCTaGGTGCTGGGCACCGCTCCTGTGGTCAGTGGTGGCGGGGCCCTG | + |
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Preference number: 1 (lower is better) Translates to: ECGCGWHKPGPLGNS*VLGTAPVVSGGGAL Trigger: CAGGGCCCCGCCACCACTGACCACAGGAGCGGTGCCCAGCACCCAGGAGTTCCCCAAGGGTCCAGGTTTGTGCCACCCACACCCACACTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR TCA 90 bp | TTCAACGCCAACACGTGGGGCTGTCACCAGGGGAAACCGGAGGCCTaGGCTCAGCACCTCTGGACCCGCACCCGGCTAGCCTCCAGCCTC | + |
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Preference number: 1 (lower is better) Translates to: FNANTWGCHQGKPEA*AQHLWTRTRLASSL Trigger: GAGGCTGGAGGCTAGCCGGGTGCGGGTCCAGAGGTGCTGAGCTCAGGCCTCCGGTTTCCCCTGGTGACAGCCCCACGTGTTGGCGTTGAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR TCA 90 bp | GCTGGACTTAGAGGCAGAGCAGGGAGGTTCCGAAGGTCGCCTGGGTaGGGGGTGCACAGCAGAAGGGCCACCCACCCCAAAGCCCAAGAG | + |
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Preference number: 1 (lower is better) Translates to: AGLRGRAGRFRRSPG*GVHSRRATHPKAQE Trigger: CTCTTGGGCTTTGGGGTGGGTGGCCCTTCTGCTGTGCACCCCTCACCCAGGCGACCTTCGGAACCTCCCTGCTCTGCCTCTAAGTCCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR GCA 90 bp | TTAGAGGCAGAGCAGGGAGGTTCCGAAGGTCGCCTGGGTGAGGGGTaGACAGCAGAAGGGCCACCCACCCCAAAGCCCAAGAGCCGCTCA | + |
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Preference number: 1 (lower is better) Translates to: LEAEQGGSEGRLGEG*TAEGPPTPKPKSRS Trigger: TGAGCGGCTCTTGGGCTTTGGGGTGGGTGGCCCTTCTGCTGTGCACCCCTCACCCAGGCGACCTTCGGAACCTCCCTGCTCTGCCTCTAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR CCA 90 bp | CAAGCTGGGTGGAGGTGGAAAGGGCCCCCACCACCTGGGCCGCTCTaGCAGCCCACCTTCTTCCCATCTGCTCTAAGGCTCTTTGGAGTC | + |
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Preference number: 1 (lower is better) Translates to: QAGWRWKGPPPPGPL*QPTFFPSALRLFGV Trigger: GACTCCAAAGAGCCTTAGAGCAGATGGGAAGAAGGTGGGCTGCCAGAGCGGCCCAGGTGGTGGGGGCCCTTTCCACCTCCACCCAGCTTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR CCA 90 bp | AGTGTGGGTGTGAGTGTGGGTGTGGGTGGCACAAACCTGGACCCTTaGGGAACTCCTGGGTGCTGGGCACCGCTCCTGTGGTCAGTGGTG | + |
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Preference number: 1 (lower is better) Translates to: SVGVSVGVGGTNLDP*GTPGCWAPLLWSVV Trigger: CACCACTGACCACAGGAGCGGTGCCCAGCACCCAGGAGTTCCCCAAGGGTCCAGGTTTGTGCCACCCACACCCACACTCACACCCACACT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR CCA 90 bp | GGGTGTGAGTGTGGGTGTGAGTGTGGGTGTGAGTGTGGGTGTGGGTaGCACAAACCTGGACCCTTGGGGAACTCCTGGGTGCTGGGCACC | + |
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Preference number: 1 (lower is better) Translates to: GCECGCECGCECGCG*HKPGPLGNSWVLGT Trigger: GGTGCCCAGCACCCAGGAGTTCCCCAAGGGTCCAGGTTTGTGCCACCCACACCCACACTCACACCCACACTCACACCCACACTCACACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR GCA 90 bp | GCCCCCACCACCTGGGCCGCTCTGGCAGCCCACCTTCTTCCCATCTaGTCTAAGGCTCTTTGGAGTCAGCCAGCCTCCTTGGAAAACGCT | + |
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Preference number: 1 (lower is better) Translates to: APTTWAALAAHLLPI*SKALWSQPASLENA Trigger: AGCGTTTTCCAAGGAGGCTGGCTGACTCCAAAGAGCCTTAGAGCAGATGGGAAGAAGGTGGGCTGCCAGAGCGGCCCAGGTGGTGGGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR GCA 90 bp | GGGCTGAGTGACAGGGAAGGGAGCTGGTATCCCAAGGGCGCTTTCTaGCCACGCAGTGCTTCTCCCTCCCACCACCAGCAGTTCCAACCA | + |
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Preference number: 1 (lower is better) Translates to: GLSDREGSWYPKGAF*PRSASPSHHQQFQP Trigger: TGGTTGGAACTGCTGGTGGTGGGAGGGAGAAGCACTGCGTGGGCAGAAAGCGCCCTTGGGATACCAGCTCCCTTCCCTGTCACTCAGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR CCA 90 bp | TTCTTCCCATCTGCTCTAAGGCTCTTTGGAGTCAGCCAGCCTCCTTaGAAAACGCTGGAGCTGAGGGCCGACCCGCCGCCCCTTCAAGGC | + |
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Preference number: 1 (lower is better) Translates to: FFPSALRLFGVSQPP*KTLELRADPPPLQG Trigger: GCCTTGAAGGGGCGGCGGGTCGGCCCTCAGCTCCAGCGTTTTCCAAGGAGGCTGGCTGACTCCAAAGAGCCTTAGAGCAGATGGGAAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR GCA 90 bp | CAGGGAAGGGAGCTGGTATCCCAAGGGCGCTTTCTGCCCACGCAGTaGTTCTCCCTCCCACCACCAGCAGTTCCAACCATTAGCAAGACC | + |
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Preference number: 1 (lower is better) Translates to: QGRELVSQGRFLPTQ*FSLPPPAVPTISKT Trigger: GGTCTTGCTAATGGTTGGAACTGCTGGTGGTGGGAGGGAGAAGCACTGCGTGGGCAGAAAGCGCCCTTGGGATACCAGCTCCCTTCCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR CCA 90 bp | GCAGCTGCAGTGAGGGGCCCTGCAGGCAGATCAGGAATACCTGCGTaGCTGGGGCTTAGGATTGCTAAACCAGCCTGTCCCACTCCAAAG | + |
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Preference number: 1 (lower is better) Translates to: AAAVRGPAGRSGIPA*LGLRIAKPACPTPK Trigger: CTTTGGAGTGGGACAGGCTGGTTTAGCAATCCTAAGCCCCAGCCACGCAGGTATTCCTGATCTGCCTGCAGGGCCCCTCACTGCAGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR TCA 90 bp | GAGGGGAAAGAGACCAAAACAAGTGTGGCCTTCCATGAGCCTGTGTaGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGG | + |
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Preference number: 1 (lower is better) Translates to: EGKETKTSVAFHEPV*VWVWVWVWVWVWVW Trigger: CCACACCCACACCCACACCCACACCCACACCCACACCCACACTCACACAGGCTCATGGAAGGCCACACTTGTTTTGGTCTCTTTCCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR TCA 90 bp | TGTGGGTTTGGAGGGGAAAGAGACCAAAACAAGTGTGGCCTTCCATaGGCCTGTGTGAGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGT | + |
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Preference number: 1 (lower is better) Translates to: CGFGGERDQNKCGLP*ACVSVGVGVGVGVG Trigger: ACCCACACCCACACCCACACCCACACCCACACTCACACAGGCTCATGGAAGGCCACACTTGTTTTGGTCTCTTTCCCCTCCAAACCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR GCA 90 bp | CAGCAGTTCCAACCATTAGCAAGACCTTCCTTACACAGGACCCAATaGCAACTGTCTCAGATCCCCTCACTGCAGGCTCCTGGCCCACCT | + |
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Preference number: 1 (lower is better) Translates to: QQFQPLARPSLHRTQ*QLSQIPSLQAPGPP Trigger: AGGTGGGCCAGGAGCCTGCAGTGAGGGGATCTGAGACAGTTGGCATTGGGTCCTGTGTAAGGAAGGTCTTGCTAATGGTTGGAACTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR CCA 90 bp | CAACTGGCACTCTGCTCACCTGCTTGTGGAGGGCAGCAGCAGAGATaGCACGTGGAGTTAGGAGCCACTGCTGATGAAACATATGACCAG | + |
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Preference number: 1 (lower is better) Translates to: QLALCSPACGGQQQR*HVELGATADETYDQ Trigger: CTGGTCATATGTTTCATCAGCAGTGGCTCCTAACTCCACGTGCCATCTCTGCTGCTGCCCTCCACAAGCAGGTGAGCAGAGTGCCAGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR CCA 90 bp | TGGCTCAAACTGTGGGTTTGGAGGGGAAAGAGACCAAAACAAGTGTaGCCTTCCATGAGCCTGTGTGAGTGTGGGTGTGGGTGTGGGTGT | + |
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Preference number: 1 (lower is better) Translates to: WLKLWVWRGKRPKQV*PSMSLCECGCGCGC Trigger: ACACCCACACCCACACCCACACTCACACAGGCTCATGGAAGGCCACACTTGTTTTGGTCTCTTTCCCCTCCAAACCCACAGTTTGAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR CCA 90 bp | TTGGTTGTGAGTTTAGTTAGGCGACATCATCACCTTCAACACAACTaGCACTCTGCTCACCTGCTTGTGGAGGGCAGCAGCAGAGATGGC | + |
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Preference number: 1 (lower is better) Translates to: LVVSLVRRHHHLQHN*HSAHLLVEGSSRDG Trigger: GCCATCTCTGCTGCTGCCCTCCACAAGCAGGTGAGCAGAGTGCCAGTTGTGTTGAAGGTGATGATGTCGCCTAACTAAACTCACAACCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR-3UTR GCA 90 bp | CGGCTGGACTTAGAGGCAGAGCAGGGAGGTTCCGAAGGTCGCCTGGGTGAGGGGAGCCGCCCCCGGCTCTaGGCTTCCTCCCAGGGCACC | + |
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Preference number: 2 (lower is better) Translates to: RLDLEAEQGGSEGRLGEGSRPRL*ASSQGT Trigger: GGTGCCCTGGGAGGAAGCGCAGAGCCGGGGGCGGCT...CCCCTCACCCAGGCGACCTTCGGAACCTCCCTGCTCTGCCTCTAAGTCCAGCCG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR-3UTR CCA 90 bp | GTGGGTGTGGGTGGCACAAACCTGGACCCTTGGGGAACTCCTGGGTGCTGGGCACGCTCCTGTGGTCAGTaGTGGCGGGGCCCTGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: VGVGGTNLDPWGTPGCWARSCGQ*WRGPGE Trigger: CTCCCCAGGGCCCCGCCACCACTGACCACAGGAGCG...TGCCCAGCACCCAGGAGTTCCCCAAGGGTCCAGGTTTGTGCCACCCACACCCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR-3UTR TCA 90 bp | AGGGGCCCTGCAGGCAGATCAGGAATACCTGCGTGGCTGGGGCTTAGGATTGCTGGAAAACGCTGGAGCTaGGGGCCGACCCGCCGCCCC | + |
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Preference number: 2 (lower is better) Translates to: RGPAGRSGIPAWLGLRIAGKRWS*GPTRRP Trigger: GGGGCGGCGGGTCGGCCCTCAGCTCCAGCGTTTTCC...AGCAATCCTAAGCCCCAGCCACGCAGGTATTCCTGATCTGCCTGCAGGGCCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR-3UTR GCA 90 bp | CAAACCTGGACCCTTGGGGAACTCCTGGGTGCTGGGCACCGCTCCTGTGGTCAGCGCCTGGGTGAGGGGTaGACAGCAGAAGGGCCACCC | + |
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Preference number: 2 (lower is better) Translates to: QTWTLGELLGAGHRSCGQRLGEG*TAEGPP Trigger: GGGTGGCCCTTCTGCTGTGCACCCCTCACCCAGGCG...CTGACCACAGGAGCGGTGCCCAGCACCCAGGAGTTCCCCAAGGGTCCAGGTTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR CAA 90 bp | GAGTGTGGGTGTGAGTGTGGGTGTGGGTGGCACAAACCTGGACCCTaGGGGAACTCCTGGGTGCTGGGCACCGCTCCTGTGGTCAGTGGT | + |
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Preference number: 2 (lower is better) Translates to: ECGCECGCGWHKPGP*GNSWVLGTAPVVSG Trigger: ACCACTGACCACAGGAGCGGTGCCCAGCACCCAGGAGTTCCCCAAGGGTCCAGGTTTGTGCCACCCACACCCACACTCACACCCACACTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR-3UTR GCA 90 bp | AGGGGCCCTGCAGGCAGATCAGGAATACCTGCGTGGCTGGGGCTTAGGATTGCTTGGGGAACTCCTGGGTaGTGGGCACCGCTCCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: RGPAGRSGIPAWLGLRIAWGTPG*WAPLLW Trigger: CCACAGGAGCGGTGCCCAGCACCCAGGAGTTCCCCA...AGCAATCCTAAGCCCCAGCCACGCAGGTATTCCTGATCTGCCTGCAGGGCCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR-3UTR TCA 90 bp | CCCACCAACGTCTCCATCTCCAGGGAGTCCCAGATGCCACAAAGACTCAGGGCAGGGAAACCGGAGGCCTaGGCTCAGCACCTCTGGACC | + |
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Preference number: 2 (lower is better) Translates to: PTNVSISRESQMPQRLRAGKPEA*AQHLWT Trigger: GGTCCAGAGGTGCTGAGCTCAGGCCTCCGGTTTCCC...TGCCCTGAGTCTTTGTGGCATCTGGGACTCCCTGGAGATGGAGACGTTGGTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR-3UTR TCA 90 bp | GTGGGTGTGGGTGGCACAAACCTGGACCCTTGGGGAACTCCTGGGTGCTGGGCAATCAAGGACCAGGGCTaGGTGACAGGGAAGGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: VGVGGTNLDPWGTPGCWAIKDQG*VTGKGA Trigger: AGCTCCCTTCCCTGTCACTCAGCCCTGGTCCTTGAT...TGCCCAGCACCCAGGAGTTCCCCAAGGGTCCAGGTTTGTGCCACCCACACCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR-3UTR CCA 90 bp | CCCACCAACGTCTCCATCTCCAGGGAGTCCCAGATGCCACAAAGACTCAGGGCATCCTGTGGTCAGTGGTaGCGGGGCCCTGGGGAGTTG | + |
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Preference number: 2 (lower is better) Translates to: PTNVSISRESQMPQRLRASCGQW*RGPGEL Trigger: CAACTCCCCAGGGCCCCGCCACCACTGACCACAGGA...TGCCCTGAGTCTTTGTGGCATCTGGGACTCCCTGGAGATGGAGACGTTGGTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR CAA 90 bp | CTTCTTCCCATCTGCTCTAAGGCTCTTTGGAGTCAGCCAGCCTCCTaGGAAAACGCTGGAGCTGAGGGCCGACCCGCCGCCCCTTCAAGG | + |
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Preference number: 2 (lower is better) Translates to: LLPICSKALWSQPAS*ENAGAEGRPAAPSR Trigger: CCTTGAAGGGGCGGCGGGTCGGCCCTCAGCTCCAGCGTTTTCCAAGGAGGCTGGCTGACTCCAAAGAGCCTTAGAGCAGATGGGAAGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR-3UTR CCA 90 bp | GAGTGTGGGTGTGAGTGTGGGTGTGGGTGGCACAAACCTGGACCCTTGGGGAACTTCAACGCCAACACGTaGGGCTGTCACCAGGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: ECGCECGCGWHKPGPLGNFNANT*GCHQGK Trigger: TTTCCCCTGGTGACAGCCCCACGTGTTGGCGTTGAA...GTTCCCCAAGGGTCCAGGTTTGTGCCACCCACACCCACACTCACACCCACACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR-3UTR TCA 90 bp | CCCACCAACGTCTCCATCTCCAGGGAGTCCCAGATGCCACAAAGACTCAGGGCAAATTCCTCTTCCCAGTaGCTGGGGGCTCCTTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: PTNVSISRESQMPQRLRANSSSQ*LGAPCP Trigger: AGGACAAGGAGCCCCCAGTCACTGGGAAGAGGAATT...TGCCCTGAGTCTTTGTGGCATCTGGGACTCCCTGGAGATGGAGACGTTGGTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR-3UTR GCA 90 bp | GCTGATGAAACATATGACCAGGGCCAGGTTTATCCCAACTCCTGGCTCCTTCTCAGCACTGGTGGCAGCTaGAGTGAGGGGCCCTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: ADETYDQGQVYPNSWLLLSTGGS*SEGPCR Trigger: CCTGCAGGGCCCCTCACTGCAGCTGCCACCAGTGCT...GAGAAGGAGCCAGGAGTTGGGATAAACCTGGCCCTGGTCATATGTTTCATCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR-3UTR CCA 90 bp | GCTCAAACTGTGGGTTTGGAGGGGAAAGAGACCAAAACAAGTGTGGCCTTCCATGTTCCGAAGGTCGCCTaGGTGAGGGGTGCACAGCAG | + |
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Preference number: 2 (lower is better) Translates to: AQTVGLEGKETKTSVAFHVPKVA*VRGAQQ Trigger: CTGCTGTGCACCCCTCACCCAGGCGACCTTCGGAAC...ATGGAAGGCCACACTTGTTTTGGTCTCTTTCCCCTCCAAACCCACAGTTTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR CAA 90 bp | GCCCTGCAGGCAGATCAGGAATACCTGCGTGGCTGGGGCTTAGGATaGCTAAACCAGCCTGTCCCACTCCAAAGTAACAGTAACCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: ALQADQEYLRGWGLG*LNQPVPLQSNSNLS Trigger: AGACAGGTTACTGTTACTTTGGAGTGGGACAGGCTGGTTTAGCAATCCTAAGCCCCAGCCACGCAGGTATTCCTGATCTGCCTGCAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR-3UTR GCA 90 bp | CCCAAGAGAGATTGCGGGTTGGTTGTGAGTTTAGTTAGGCGACATCATCACCTTCTCAGATCCCCTCACTaGAGGCTCCTGGCCCACCTG | + |
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Preference number: 2 (lower is better) Translates to: PKRDCGLVVSLVRRHHHLLRSPH*RLLAHL Trigger: CAGGTGGGCCAGGAGCCTGCAGTGAGGGGATCTGAG...AAGGTGATGATGTCGCCTAACTAAACTCACAACCAACCCGCAATCTCTCTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR-3UTR TCA 90 bp | GCTGATGAAACATATGACCAGGGCCAGGTTTATCCCAACTCCTGGCTCCTTCTCAAGACTCAGGGCATCTaGCTGGGGCACTTAGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: ADETYDQGQVYPNSWLLLKTQGI*LGHLGP Trigger: AGGACCTAAGTGCCCCAGTCAGATGCCCTGAGTCTT...GAGAAGGAGCCAGGAGTTGGGATAAACCTGGCCCTGGTCATATGTTTCATCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR-3UTR GCA 90 bp | ATGAAACATATGACCAGGGCCAGGTTTATCCCAACTCCTGGCTCCTTCTCTCCATGCAGTGAGGGGCCCTaGAGGCAGATCAGGAATACC | + |
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Preference number: 2 (lower is better) Translates to: MKHMTRARFIPTPGSFSPCSEGP*RQIRNT Trigger: GGTATTCCTGATCTGCCTGCAGGGCCCCTCACTGCA...TGGAGAGAAGGAGCCAGGAGTTGGGATAAACCTGGCCCTGGTCATATGTTTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR-3UTR CCA 90 bp | ATGAAACATATGACCAGGGCCAGGTTTATCCCAACTCCTGGCTCCTTCTCTCCACCTCTTCCCAGTGACTaGGGGCTCCTTGTCCTTCAC | + |
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Preference number: 2 (lower is better) Translates to: MKHMTRARFIPTPGSFSPPLPSD*GLLVLH Trigger: GTGAAGGACAAGGAGCCCCCAGTCACTGGGAAGAGG...TGGAGAGAAGGAGCCAGGAGTTGGGATAAACCTGGCCCTGGTCATATGTTTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR-3UTR CCA 90 bp | CCCAAGAGAGATTGCGGGTTGGTTGTGAGTTTAGTTAGGCGACATCATCACCTTACAAACCTGGACCCTTaGGGAACTCCTGGGTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: PKRDCGLVVSLVRRHHHLTNLDP*GTPGCW Trigger: CCAGCACCCAGGAGTTCCCCAAGGGTCCAGGTTTGT...AAGGTGATGATGTCGCCTAACTAAACTCACAACCAACCCGCAATCTCTCTTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR-3UTR CCA 90 bp | CCCAAGAGAGATTGCGGGTTGGTTGTGAGTTTAGTTAGGCGACATCATCACCTTGAGTGTGGGTGTGGGTaGCACAAACCTGGACCCTTG | + |
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Preference number: 2 (lower is better) Translates to: PKRDCGLVVSLVRRHHHLECGCG*HKPGPL Trigger: CAAGGGTCCAGGTTTGTGCCACCCACACCCACACTC...AAGGTGATGATGTCGCCTAACTAAACTCACAACCAACCCGCAATCTCTCTTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR CAA 90 bp | TACACAGGAGGCTGCTGTTCAGGAGCTCTGAACACACGCACAGCTTaGGCTCAAACTGTGGGTTTGGAGGGGAAAGAGACCAAAACAAGT | + |
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Preference number: 2 (lower is better) Translates to: YTGGCCSGALNTRTA*AQTVGLEGKETKTS Trigger: ACTTGTTTTGGTCTCTTTCCCCTCCAAACCCACAGTTTGAGCCAAAGCTGTGCGTGTGTTCAGAGCTCCTGAACAGCAGCCTCCTGTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR-3UTR CCA 90 bp | ATGAAACATATGACCAGGGCCAGGTTTATCCCAACTCCTGGCTCCTTCTCTCCATCAGGAATACCTGCGTaGCTGGGGCTTAGGATTGCT | + |
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Preference number: 2 (lower is better) Translates to: MKHMTRARFIPTPGSFSPSGIPA*LGLRIA Trigger: AGCAATCCTAAGCCCCAGCCACGCAGGTATTCCTGA...TGGAGAGAAGGAGCCAGGAGTTGGGATAAACCTGGCCCTGGTCATATGTTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR-3UTR GCA 90 bp | CCCAAGAGAGATTGCGGGTTGGTTGTGAGTTTAGTTAGGCGACATCATCACCTTATTTACACAGGAGGCTaGTGTTCAGGAGCTCTGAAC | + |
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Preference number: 2 (lower is better) Translates to: PKRDCGLVVSLVRRHHHLIYTGG*CSGALN Trigger: GTTCAGAGCTCCTGAACAGCAGCCTCCTGTGTAAAT...AAGGTGATGATGTCGCCTAACTAAACTCACAACCAACCCGCAATCTCTCTTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR CCA 72 bp | GGCACAAACCTGGACCCTTGGGGAACTCCTGGGTGCTaGGCACCGCTCCTGTGGTCAGTGGTGGCGGGGCCC | + |
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Preference number: 3 (lower is better) Translates to: GTNLDPWGTPGC*APLLWSVVAGP Trigger: GGGCCCCGCCACCACTGACCACAGGAGCGGTGCCCAGCACCCAGGAGTTCCCCAAGGGTCCAGGTTTGTGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR TCA 72 bp | AACACGTGGGGCTGTCACCAGGGGAAACCGGAGGCCTaGGCTCAGCACCTCTGGACCCGCACCCGGCTAGCC | + |
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Preference number: 3 (lower is better) Translates to: NTWGCHQGKPEA*AQHLWTRTRLA Trigger: GGCTAGCCGGGTGCGGGTCCAGAGGTGCTGAGCTCAGGCCTCCGGTTTCCCCTGGTGACAGCCCCACGTGTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR GCA 72 bp | GAGCAGGGAGGTTCCGAAGGTCGCCTGGGTGAGGGGTaGACAGCAGAAGGGCCACCCACCCCAAAGCCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: EQGGSEGRLGEG*TAEGPPTPKPK Trigger: CTTGGGCTTTGGGGTGGGTGGCCCTTCTGCTGTGCACCCCTCACCCAGGCGACCTTCGGAACCTCCCTGCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| 3UTR CCA 72 bp | GAACTCCTGGGTGCTGGGCACCGCTCCTGTGGTCAGTaGTGGCGGGGCCCTGGGGAGTTGCCTTGTCCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: ELLGAGHRSCGQ*WRGPGELPCPR Trigger: TCTAGGACAAGGCAACTCCCCAGGGCCCCGCCACCACTGACCACAGGAGCGGTGCCCAGCACCCAGGAGTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| 3UTR CCA 72 bp | TGTGGGTGGCACAAACCTGGACCCTTGGGGAACTCCTaGGTGCTGGGCACCGCTCCTGTGGTCAGTGGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: CGWHKPGPLGNS*VLGTAPVVSGG Trigger: GCCACCACTGACCACAGGAGCGGTGCCCAGCACCCAGGAGTTCCCCAAGGGTCCAGGTTTGTGCCACCCACA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| 3UTR CCA 72 bp | TCTGCTCTAAGGCTCTTTGGAGTCAGCCAGCCTCCTTaGAAAACGCTGGAGCTGAGGGCCGACCCGCCGCCC | + |
|
Preference number: 3 (lower is better) Translates to: SALRLFGVSQPP*KTLELRADPPP Trigger: GGGCGGCGGGTCGGCCCTCAGCTCCAGCGTTTTCCAAGGAGGCTGGCTGACTCCAAAGAGCCTTAGAGCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| 3UTR GCA 72 bp | ACCTGGGCCGCTCTGGCAGCCCACCTTCTTCCCATCTaGTCTAAGGCTCTTTGGAGTCAGCCAGCCTCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: TWAALAAHLLPI*SKALWSQPASL Trigger: CAAGGAGGCTGGCTGACTCCAAAGAGCCTTAGAGCAGATGGGAAGAAGGTGGGCTGCCAGAGCGGCCCAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| 3UTR CCA 72 bp | TGTGGGTGTGAGTGTGGGTGTGAGTGTGGGTGTGGGTaGCACAAACCTGGACCCTTGGGGAACTCCTGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: CGCECGCECGCG*HKPGPLGNSWV Trigger: CACCCAGGAGTTCCCCAAGGGTCCAGGTTTGTGCCACCCACACCCACACTCACACCCACACTCACACCCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| 3UTR CCA 72 bp | GGGGCCCTGCAGGCAGATCAGGAATACCTGCGTGGCTaGGGCTTAGGATTGCTAAACCAGCCTGTCCCACTC | + |
|
Preference number: 3 (lower is better) Translates to: GALQADQEYLRG*GLGLLNQPVPL Trigger: GAGTGGGACAGGCTGGTTTAGCAATCCTAAGCCCCAGCCACGCAGGTATTCCTGATCTGCCTGCAGGGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| 3UTR GCA 72 bp | GAGCTGGTATCCCAAGGGCGCTTTCTGCCCACGCAGTaGTTCTCCCTCCCACCACCAGCAGTTCCAACCATT | + |
|
Preference number: 3 (lower is better) Translates to: ELVSQGRFLPTQ*FSLPPPAVPTI Trigger: AATGGTTGGAACTGCTGGTGGTGGGAGGGAGAAGCACTGCGTGGGCAGAAAGCGCCCTTGGGATACCAGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| 3UTR GCA 72 bp | CCCCCACCAACGTCTCCATCTCCAGGGAGTCCCAGATaGCACAAAGACTCAGGGCATCTGACTGGGGCACTT | + |
|
Preference number: 3 (lower is better) Translates to: PPPTSPSPGSPR*HKDSGHLTGAL Trigger: AAGTGCCCCAGTCAGATGCCCTGAGTCTTTGTGGCATCTGGGACTCCCTGGAGATGGAGACGTTGGTGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| 3UTR TCA 72 bp | GAGACCAAAACAAGTGTGGCCTTCCATGAGCCTGTGTaGGTGTGGGTGTGGGTGTGGGTGTGGGTGTGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: ETKTSVAFHEPV*VWVWVWVWVWV Trigger: CACCCACACCCACACCCACACCCACACCCACACTCACACAGGCTCATGGAAGGCCACACTTGTTTTGGTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| 3UTR TCA 72 bp | GGAGGGGAAAGAGACCAAAACAAGTGTGGCCTTCCATaGGCCTGTGTGAGTGTGGGTGTGGGTGTGGGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: GGERDQNKCGLP*ACVSVGVGVGV Trigger: CACACCCACACCCACACCCACACTCACACAGGCTCATGGAAGGCCACACTTGTTTTGGTCTCTTTCCCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| 3UTR CCA 72 bp | GCAGCCCACCTTCTTCCCATCTGCTCTAAGGCTCTTTaGAGTCAGCCAGCCTCCTTGGAAAACGCTGGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: AAHLLPICSKAL*SQPASLENAGA Trigger: AGCTCCAGCGTTTTCCAAGGAGGCTGGCTGACTCCAAAGAGCCTTAGAGCAGATGGGAAGAAGGTGGGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| 3UTR TCA 72 bp | CAGGGAGTCCCAGATGCCACAAAGACTCAGGGCATCTaGCTGGGGCACTTAGGTCCTCTAAGGAGTACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: QGVPDATKTQGI*LGHLGPLRSTE Trigger: CTCTGTACTCCTTAGAGGACCTAAGTGCCCCAGTCAGATGCCCTGAGTCTTTGTGGCATCTGGGACTCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| 3UTR CCA 72 bp | CTGTGGGTTTGGAGGGGAAAGAGACCAAAACAAGTGTaGCCTTCCATGAGCCTGTGTGAGTGTGGGTGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LWVWRGKRPKQV*PSMSLCECGCG Trigger: CCCACACCCACACTCACACAGGCTCATGGAAGGCCACACTTGTTTTGGTCTCTTTCCCCTCCAAACCCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| 3UTR-3UTR CAA 90 bp | CCCAAGAGAGATTGCGGGTTGGTTGTGAGTTTAGTTAGGCGACATCATCACCTTCACAAACCTGGACCCTaGGGGAACTCCTGGGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PKRDCGLVVSLVRRHHHLHKPGP*GNSWVL Trigger: CAGCACCCAGGAGTTCCCCAAGGGTCCAGGTTTGTG...AAGGTGATGATGTCGCCTAACTAAACTCACAACCAACCCGCAATCTCTCTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| 3UTR CCA 72 bp | AGTTTAGTTAGGCGACATCATCACCTTCAACACAACTaGCACTCTGCTCACCTGCTTGTGGAGGGCAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: SLVRRHHHLQHN*HSAHLLVEGSS Trigger: GCTGCTGCCCTCCACAAGCAGGTGAGCAGAGTGCCAGTTGTGTTGAAGGTGATGATGTCGCCTAACTAAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| 3UTR-3UTR CAA 90 bp | CCCAAGAGAGATTGCGGGTTGGTTGTGAGTTTAGTTAGGCGACATCATCACCTTAGTCAGCCAGCCTCCTaGGAAAACGCTGGAGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: PKRDCGLVVSLVRRHHHLSQPAS*ENAGAE Trigger: CTCAGCTCCAGCGTTTTCCAAGGAGGCTGGCTGACT...AAGGTGATGATGTCGCCTAACTAAACTCACAACCAACCCGCAATCTCTCTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| 3UTR-3UTR CAA 90 bp | GCTGATGAAACATATGACCAGGGCCAGGTTTATCCCAACTCCTGGCTCCTTCTCGTGACTGGGGGCTCCTaGTCCTTCACAAAGATACCA | + |
|
Preference number: 3 (lower is better) Translates to: ADETYDQGQVYPNSWLLLVTGGS*SFTKIP Trigger: TGGTATCTTTGTGAAGGACAAGGAGCCCCCAGTCAC...GAGAAGGAGCCAGGAGTTGGGATAAACCTGGCCCTGGTCATATGTTTCATCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| CDS-3UTR CCA 90 bp | CGCCAACACGTGGGGCTGTCACCAGGGGAAACCGGAGGCCTGAGCTCAGCACCTGCGACCCATCCAGCTTaGCCGCCAGCAGCGCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: RQHVGLSPGETGGLSSAPATHPA*PPAAPG Trigger: CCCGGGCGCTGCTGGCGGCCAAGCTGGATGGGTCGC...AGGTGCTGAGCTCAGGCCTCCGGTTTCCCCTGGTGACAGCCCCACGTGTTGGCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| CDS-3UTR GCA 90 bp | GTGGGTGTGGGTGGCACAAACCTGGACCCTTGGGGAACTCCTGGGTGCTGGGCAAGCCGCCCCCGGCTCTaGGCTTCCTCCCAGGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: VGVGGTNLDPWGTPGCWASRPRL*ASSQGT Trigger: GGTGCCCTGGGAGGAAGCGCAGAGCCGGGGGCGGCT...TGCCCAGCACCCAGGAGTTCCCCAAGGGTCCAGGTTTGTGCCACCCACACCCAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| CDS-3UTR GCA 90 bp | CGCTTCCTCCCAGGGCACCAAGGCCTTCAACGCCAACACGTGGGGCTGTCACCAGGAGAGGGCGAGGCCTaGAGGTCCAGGCAAGCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: RFLPGHQGLQRQHVGLSPGEGEA*RSRQAA Trigger: CGCGGCTTGCCTGGACCTGCAGGCCTCGCCCTCTCC...TGGTGACAGCCCCACGTGTTGGCGTTGAAGGCCTTGGTGCCCTGGGAGGAAGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| CDS-3UTR CCA 90 bp | CGCCAACACGTGGGGCTGTCACCAGGGGAAACCGGAGGCCTGAGCTCAGCACCTGGTCGTCGCAGTAGGTaGCCATGTCCAGCCGCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RQHVGLSPGETGGLSSAPGRRSR*PCPAAP Trigger: GGGCGCGGCTGGACATGGCCACCTACTGCGACGACC...AGGTGCTGAGCTCAGGCCTCCGGTTTCCCCTGGTGACAGCCCCACGTGTTGGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| CDS-3UTR CCA 90 bp | CGGCTGGACTTAGAGGCAGAGCAGGGAGGTTCCGAAGGTCGCCTGGGTGAGGGGAGGGTCTGGGGAGCGTaGGTGGCGACTGTCGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RLDLEAEQGGSEGRLGEGRVWGA*VATVGG Trigger: GCCACCGACAGTCGCCACCCACGCTCCCCAGACCCT...CCCCTCACCCAGGCGACCTTCGGAACCTCCCTGCTCTGCCTCTAAGTCCAGCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| CDS-3UTR TCA 90 bp | CAAACCTGGACCCTTGGGGAACTCCTGGGTGCTGGGCACCGCTCCTGTGGTCAGCGTAGGACTTGGGGCTaGGCGCTGGCGCGTTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: QTWTLGELLGAGHRSCGQRRTWG*ALARSP Trigger: GGGTGAACGCGCCAGCGCTCAGCCCCAAGTCCTACG...CTGACCACAGGAGCGGTGCCCAGCACCCAGGAGTTCCCCAAGGGTCCAGGTTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| CDS-3UTR CCA 90 bp | CGGCTGGACTTAGAGGCAGAGCAGGGAGGTTCCGAAGGTCGCCTGGGTGAGGGGTCCTGTGGTCAGTGGTaGCGGGGCCCTGGGGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RLDLEAEQGGSEGRLGEGSCGQW*RGPGEL Trigger: CAACTCCCCAGGGCCCCGCCACCACTGACCACAGGA...CCCCTCACCCAGGCGACCTTCGGAACCTCCCTGCTCTGCCTCTAAGTCCAGCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| CDS-3UTR TCA 90 bp | CAAACCTGGACCCTTGGGGAACTCCTGGGTGCTGGGCACCGCTCCTGTGGTCAGGGGAAACCGGAGGCCTaGGCTCAGCACCTCTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: QTWTLGELLGAGHRSCGQGKPEA*AQHLWT Trigger: GGTCCAGAGGTGCTGAGCTCAGGCCTCCGGTTTCCC...CTGACCACAGGAGCGGTGCCCAGCACCCAGGAGTTCCCCAAGGGTCCAGGTTTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| CDS-3UTR TCA 90 bp | CCAGGGCGGCTGGACTTAGAGGCAGAGCAGGGAGGTTCCGAAGGTCGCCTGGGTCTGCGGCAGCTTCCCTaGAGCAGAAGGGAAGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PGRLDLEAEQGGSEGRLGLRQLP*SRREGP Trigger: AGGGCCTTCCCTTCTGCTTCAGGGAAGCTGCCGCAG...ACCCAGGCGACCTTCGGAACCTCCCTGCTCTGCCTCTAAGTCCAGCCGCCCTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| CDS-3UTR CCA 90 bp | GTGGGTGTGGGTGGCACAAACCTGGACCCTTGGGGAACTCCTGGGTGCTGGGCACTTGGGGCTGAGCGCTaGCGCGTTCACCCACAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VGVGGTNLDPWGTPGCWALGAER*RVHPQE Trigger: CTCCTGTGGGTGAACGCGCCAGCGCTCAGCCCCAAG...TGCCCAGCACCCAGGAGTTCCCCAAGGGTCCAGGTTTGTGCCACCCACACCCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| CDS-3UTR CCA 90 bp | AGGGGCCCTGCAGGCAGATCAGGAATACCTGCGTGGCTGGGGCTTAGGATTGCTTCTGGGGAGCGTGGGTaGCGACTGTCGGTGGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: RGPAGRSGIPAWLGLRIASGERG*RLSVAA Trigger: GGCGGCCACCGACAGTCGCCACCCACGCTCCCCAGA...AGCAATCCTAAGCCCCAGCCACGCAGGTATTCCTGATCTGCCTGCAGGGCCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| CDS-3UTR TCA 90 bp | GAGTGTGGGTGTGAGTGTGGGTGTGGGTGGCACAAACCTGGACCCTTGGGGAACTGTAGAGGAGGTGACTaGGGCGGAAGCCGGCGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ECGCECGCGWHKPGPLGNCRGGD*GGSRRP Trigger: CGGCCGCCGGCTTCCGCCTCAGTCACCTCCTCTACA...GTTCCCCAAGGGTCCAGGTTTGTGCCACCCACACCCACACTCACACCCACACTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| CDS-3UTR GCA 90 bp | AGGGGCCCTGCAGGCAGATCAGGAATACCTGCGTGGCTGGGGCTTAGGATTGCTCGCCTGGGTGAGGGGTaGACAGCAGAAGGGCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: RGPAGRSGIPAWLGLRIARLGEG*TAEGPP Trigger: GGGTGGCCCTTCTGCTGTGCACCCCTCACCCAGGCG...AGCAATCCTAAGCCCCAGCCACGCAGGTATTCCTGATCTGCCTGCAGGGCCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| CDS-3UTR CCA 90 bp | CCAGGGCGGCTGGACTTAGAGGCAGAGCAGGGAGGTTCCGAAGGTCGCCTGGGTGGTGGCGACTGTCGGTaGCCGCCTCCCGAAAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PGRLDLEAEQGGSEGRLGGGDCR*PPPERK Trigger: TTTTCTTTCGGGAGGCGGCCACCGACAGTCGCCACC...ACCCAGGCGACCTTCGGAACCTCCCTGCTCTGCCTCTAAGTCCAGCCGCCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| CDS-3UTR CCA 90 bp | CCCACCAACGTCTCCATCTCCAGGGAGTCCCAGATGCCACAAAGACTCAGGGCATGGGCACCGCTCCTGTaGTCAGTGGTGGCGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PTNVSISRESQMPQRLRAWAPLL*SVVAGP Trigger: GGGCCCCGCCACCACTGACCACAGGAGCGGTGCCCA...TGCCCTGAGTCTTTGTGGCATCTGGGACTCCCTGGAGATGGAGACGTTGGTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| CDS-3UTR CCA 90 bp | CCAGGGCGGCTGGACTTAGAGGCAGAGCAGGGAGGTTCCGAAGGTCGCCTGGGTGGGCAGCAGCAGAGATaGCACGTGGAGTTAGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGRLDLEAEQGGSEGRLGGQQQR*HVELGA Trigger: GGCTCCTAACTCCACGTGCCATCTCTGCTGCTGCCC...ACCCAGGCGACCTTCGGAACCTCCCTGCTCTGCCTCTAAGTCCAGCCGCCCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| CDS-3UTR CCA 90 bp | GAGTGTGGGTGTGAGTGTGGGTGTGGGTGGCACAAACCTGGACCCTTGGGGAACAGCGCACGGCCGCGCTaGCTTCAGCTCTCCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ECGCECGCGWHKPGPLGNSARPR*LQLSSS Trigger: GGAAGAGGAGAGCTGAAGCCAGCGCGGCCGTGCGCT...GTTCCCCAAGGGTCCAGGTTTGTGCCACCCACACCCACACTCACACCCACACTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| CDS-3UTR CCA 90 bp | GAGTGTGGGTGTGAGTGTGGGTGTGGGTGGCACAAACCTGGACCCTTGGGGAACGTGGGCCAAGCTGGGTaGAGGTGGAAAGGGCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ECGCECGCGWHKPGPLGNVGQAG*RWKGPP Trigger: TGGGGGCCCTTTCCACCTCCACCCAGCTTGGCCCAC...GTTCCCCAAGGGTCCAGGTTTGTGCCACCCACACCCACACTCACACCCACACTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| CDS-3UTR CCA 90 bp | GTGGGTGTGGGTGGCACAAACCTGGACCCTTGGGGAACTCCTGGGTGCTGGGCATCTCCACTCTCTTCCTaGGAAGGACCCCTCCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: VGVGGTNLDPWGTPGCWASPLSS*EGPLPP Trigger: GGGTGGGAGGGGTCCTTCCCAGGAAGAGAGTGGAGA...TGCCCAGCACCCAGGAGTTCCCCAAGGGTCCAGGTTTGTGCCACCCACACCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| CDS-3UTR CCA 90 bp | CGGCTGGACTTAGAGGCAGAGCAGGGAGGTTCCGAAGGTCGCCTGGGTGAGGGGTTCAACGCCAACACGTaGGGCTGTCACCAGGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RLDLEAEQGGSEGRLGEGFNANT*GCHQGK Trigger: TTTCCCCTGGTGACAGCCCCACGTGTTGGCGTTGAA...CCCCTCACCCAGGCGACCTTCGGAACCTCCCTGCTCTGCCTCTAAGTCCAGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| CDS-3UTR CCA 90 bp | GTGGGTGTGGGTGGCACAAACCTGGACCCTTGGGGAACTCCTGGGTGCTGGGCAGACAGGGAAGGGAGCTaGTATCCCAAGGGCGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VGVGGTNLDPWGTPGCWADREGS*YPKGAF Trigger: GAAAGCGCCCTTGGGATACCAGCTCCCTTCCCTGTC...TGCCCAGCACCCAGGAGTTCCCCAAGGGTCCAGGTTTGTGCCACCCACACCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| CDS-3UTR CCA 90 bp | CAAACCTGGACCCTTGGGGAACTCCTGGGTGCTGGGCACCGCTCCTGTGGTCAGGAGTGTGGGTGTGGGTaGCACAAACCTGGACCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QTWTLGELLGAGHRSCGQECGCG*HKPGPL Trigger: CAAGGGTCCAGGTTTGTGCCACCCACACCCACACTC...CTGACCACAGGAGCGGTGCCCAGCACCCAGGAGTTCCCCAAGGGTCCAGGTTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| 3UTR CAA 72 bp | ATCTGCTCTAAGGCTCTTTGGAGTCAGCCAGCCTCCTaGGAAAACGCTGGAGCTGAGGGCCGACCCGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: ICSKALWSQPAS*ENAGAEGRPAA Trigger: GGCGGCGGGTCGGCCCTCAGCTCCAGCGTTTTCCAAGGAGGCTGGCTGACTCCAAAGAGCCTTAGAGCAGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| CDS-3UTR TCA 90 bp | GCTGATGAAACATATGACCAGGGCCAGGTTTATCCCAACTCCTGGCTCCTTCTCGGAAAACGCTGGAGCTaGGGGCCGACCCGCCGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ADETYDQGQVYPNSWLLLGKRWS*GPTRRP Trigger: GGGGCGGCGGGTCGGCCCTCAGCTCCAGCGTTTTCC...GAGAAGGAGCCAGGAGTTGGGATAAACCTGGCCCTGGTCATATGTTTCATCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| CDS-3UTR TCA 90 bp | CGCTTCCTCCCAGGGCACCAAGGCCTTCAACGCCAACACGTGGGGCTGTCACCAAAGACTCAGGGCATCTaGCTGGGGCACTTAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RFLPGHQGLQRQHVGLSPKTQGI*LGHLGP Trigger: AGGACCTAAGTGCCCCAGTCAGATGCCCTGAGTCTT...TGGTGACAGCCCCACGTGTTGGCGTTGAAGGCCTTGGTGCCCTGGGAGGAAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| CDS-3UTR GCA 90 bp | CGGCTGGACTTAGAGGCAGAGCAGGGAGGTTCCGAAGGTCGCCTGGGTGAGGGGCCAGGGTCCAGTAATTaGCTTTACCTGGGTCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RLDLEAEQGGSEGRLGEGPGSSN*LYLGRP Trigger: AGGACGACCCAGGTAAAGGCAATTACTGGACCCTGG...CCCCTCACCCAGGCGACCTTCGGAACCTCCCTGCTCTGCCTCTAAGTCCAGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| CDS-3UTR GCA 90 bp | CCAGTGACTGGGGGCTCCTTGTCCTTCACAAAGATACCATCCCTAAGAAGGAACGGTGGCGGCCTCGGGTaGGGATGGAGAGGGCGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PVTGGSLSFTKIPSLRRNGGGLG*GWRGRG Trigger: GCCTCGCCCTCTCCATCCGCACCCGAGGCCGCCACC...GTTCCTTCTTAGGGATGGTATCTTTGTGAAGGACAAGGAGCCCCCAGTCACTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| CDS-3UTR CCA 90 bp | GAGTGTGGGTGTGAGTGTGGGTGTGGGTGGCACAAACCTGGACCCTTGGGGAACCGCACCGAAACTCACTaGCGACCCATCCAGCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ECGCECGCGWHKPGPLGNRTETH*RPIQLG Trigger: GCCAAGCTGGATGGGTCGCCAGTGAGTTTCGGTGCG...GTTCCCCAAGGGTCCAGGTTTGTGCCACCCACACCCACACTCACACCCACACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| CDS-3UTR CCA 90 bp | CGCCAACACGTGGGGCTGTCACCAGGGGAAACCGGAGGCCTGAGCTCAGCACCTTGCTCTAAGGCTCTTTaGAGTCAGCCAGCCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RQHVGLSPGETGGLSSAPCSKAL*SQPASL Trigger: CAAGGAGGCTGGCTGACTCCAAAGAGCCTTAGAGCA...AGGTGCTGAGCTCAGGCCTCCGGTTTCCCCTGGTGACAGCCCCACGTGTTGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| CDS-3UTR TCA 90 bp | AGGGGCCCTGCAGGCAGATCAGGAATACCTGCGTGGCTGGGGCTTAGGATTGCTATCAAGGACCAGGGCTaGGTGACAGGGAAGGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RGPAGRSGIPAWLGLRIAIKDQG*VTGKGA Trigger: AGCTCCCTTCCCTGTCACTCAGCCCTGGTCCTTGAT...AGCAATCCTAAGCCCCAGCCACGCAGGTATTCCTGATCTGCCTGCAGGGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388920.5 |
||
| CDS-3UTR CCA 90 bp | AGGGGCCCTGCAGGCAGATCAGGAATACCTGCGTGGCTGGGGCTTAGGATTGCTGTCAGCCAGCCTCCTTaGAAAACGCTGGAGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RGPAGRSGIPAWLGLRIAVSQPP*KTLELR Trigger: CCTCAGCTCCAGCGTTTTCCAAGGAGGCTGGCTGAC...AGCAATCCTAAGCCCCAGCCACGCAGGTATTCCTGATCTGCCTGCAGGGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR CCA 90 bp | GTGGGTGTGGGTGGCACAAACCTGGACCCTTGGGGAACTCCTGGGTGCTGGGCATCAGGAATACCTGCGTaGCTGGGGCTTAGGATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VGVGGTNLDPWGTPGCWASGIPA*LGLRIA Trigger: AGCAATCCTAAGCCCCAGCCACGCAGGTATTCCTGA...TGCCCAGCACCCAGGAGTTCCCCAAGGGTCCAGGTTTGTGCCACCCACACCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR TCA 90 bp | AGGGGCCCTGCAGGCAGATCAGGAATACCTGCGTGGCTGGGGCTTAGGATTGCTGCTGTTCAGGAGCTCTaGACACACGCACAGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RGPAGRSGIPAWLGLRIAAVQEL*THAQLW Trigger: CCAAAGCTGTGCGTGTGTTCAGAGCTCCTGAACAGC...AGCAATCCTAAGCCCCAGCCACGCAGGTATTCCTGATCTGCCTGCAGGGCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR TCA 90 bp | GAGTGTGGGTGTGAGTGTGGGTGTGGGTGGCACAAACCTGGACCCTTGGGGAACAATTCCTCTTCCCAGTaGCTGGGGGCTCCTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ECGCECGCGWHKPGPLGNNSSSQ*LGAPCP Trigger: AGGACAAGGAGCCCCCAGTCACTGGGAAGAGGAATT...GTTCCCCAAGGGTCCAGGTTTGTGCCACCCACACCCACACTCACACCCACACTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR GCA 90 bp | CCAGTGACTGGGGGCTCCTTGTCCTTCACAAAGATACCATCCCTAAGAAGGAACGGCCTGGGCCAGCGGTaGCGCACCGAAACTCACTGG | + |
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Preference number: 4 (lower is better) Translates to: PVTGGSLSFTKIPSLRRNGLGQR*RTETHW Trigger: CCAGTGAGTTTCGGTGCGGCACCGCTGGCCCAGGCC...GTTCCTTCTTAGGGATGGTATCTTTGTGAAGGACAAGGAGCCCCCAGTCACTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR GCA 90 bp | CCCACCAACGTCTCCATCTCCAGGGAGTCCCAGATGCCACAAAGACTCAGGGCATGCAGTGAGGGGCCCTaGAGGCAGATCAGGAATACC | + |
|
Preference number: 4 (lower is better) Translates to: PTNVSISRESQMPQRLRACSEGP*RQIRNT Trigger: GGTATTCCTGATCTGCCTGCAGGGCCCCTCACTGCA...TGCCCTGAGTCTTTGTGGCATCTGGGACTCCCTGGAGATGGAGACGTTGGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR CCA 90 bp | ATGAAACATATGACCAGGGCCAGGTTTATCCCAACTCCTGGCTCCTTCTCTCCAGGCCTCGGGTGCGGATaGAGAGGGCGAGGCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: MKHMTRARFIPTPGSFSPGLGCG*RGRGLQ Trigger: CTGCAGGCCTCGCCCTCTCCATCCGCACCCGAGGCC...TGGAGAGAAGGAGCCAGGAGTTGGGATAAACCTGGCCCTGGTCATATGTTTCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR CCA 90 bp | GCTCAAACTGTGGGTTTGGAGGGGAAAGAGACCAAAACAAGTGTGGCCTTCCATCGCTCCTGTGGTCAGTaGTGGCGGGGCCCTGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AQTVGLEGKETKTSVAFHRSCGQ*WRGPGE Trigger: CTCCCCAGGGCCCCGCCACCACTGACCACAGGAGCG...ATGGAAGGCCACACTTGTTTTGGTCTCTTTCCCCTCCAAACCCACAGTTTGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR CCA 90 bp | CCCACCAACGTCTCCATCTCCAGGGAGTCCCAGATGCCACAAAGACTCAGGGCACCTCTTCCCAGTGACTaGGGGCTCCTTGTCCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PTNVSISRESQMPQRLRAPLPSD*GLLVLH Trigger: GTGAAGGACAAGGAGCCCCCAGTCACTGGGAAGAGG...TGCCCTGAGTCTTTGTGGCATCTGGGACTCCCTGGAGATGGAGACGTTGGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR GCA 90 bp | CAAACCTGGACCCTTGGGGAACTCCTGGGTGCTGGGCACCGCTCCTGTGGTCAGCACCTTCTTCCCATCTaGTCTAAGGCTCTTTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QTWTLGELLGAGHRSCGQHLLPI*SKALWS Trigger: ACTCCAAAGAGCCTTAGAGCAGATGGGAAGAAGGTG...CTGACCACAGGAGCGGTGCCCAGCACCCAGGAGTTCCCCAAGGGTCCAGGTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR GCA 90 bp | CCAGTGACTGGGGGCTCCTTGTCCTTCACAAAGATACCATCCCTAAGAAGGAACTGGGGAACTCCTGGGTaGTGGGCACCGCTCCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PVTGGSLSFTKIPSLRRNWGTPG*WAPLLW Trigger: CCACAGGAGCGGTGCCCAGCACCCAGGAGTTCCCCA...GTTCCTTCTTAGGGATGGTATCTTTGTGAAGGACAAGGAGCCCCCAGTCACTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR CCA 90 bp | GCTGATGAAACATATGACCAGGGCCAGGTTTATCCCAACTCCTGGCTCCTTCTCAACCGGAGAAGCAGGTaGCGGCCTCGGGTGCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: ADETYDQGQVYPNSWLLLNRRSR*RPRVRM Trigger: CATCCGCACCCGAGGCCGCCACCTGCTTCTCCGGTT...GAGAAGGAGCCAGGAGTTGGGATAAACCTGGCCCTGGTCATATGTTTCATCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR TCA 90 bp | CACCTTCTTCCCATCTGCTCTAAGGCTCTTTGGAGTCAGCCAGCCTCCTTGGAAAGGACCAGGGCTGAGTaGCAGGGAAGGGAGCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: HLLPICSKALWSQPASLERTRAE*QGRELV Trigger: TACCAGCTCCCTTCCCTGTCACTCAGCCCTGGTCCT...TTCCAAGGAGGCTGGCTGACTCCAAAGAGCCTTAGAGCAGATGGGAAGAAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR GCA 90 bp | CCAGTGACTGGGGGCTCCTTGTCCTTCACAAAGATACCATCCCTAAGAAGGAACCTCAGATCCCCTCACTaGAGGCTCCTGGCCCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: PVTGGSLSFTKIPSLRRNLRSPH*RLLAHL Trigger: CAGGTGGGCCAGGAGCCTGCAGTGAGGGGATCTGAG...GTTCCTTCTTAGGGATGGTATCTTTGTGAAGGACAAGGAGCCCCCAGTCACTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR GCA 90 bp | GCTCAAACTGTGGGTTTGGAGGGGAAAGAGACCAAAACAAGTGTGGCCTTCCATAGCACTGGTGGCAGCTaGAGTGAGGGGCCCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AQTVGLEGKETKTSVAFHSTGGS*SEGPCR Trigger: CCTGCAGGGCCCCTCACTGCAGCTGCCACCAGTGCT...ATGGAAGGCCACACTTGTTTTGGTCTCTTTCCCCTCCAAACCCACAGTTTGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR CCA 90 bp | CCAGTGACTGGGGGCTCCTTGTCCTTCACAAAGATACCATCCCTAAGAAGGAACGTTCCGAAGGTCGCCTaGGTGAGGGGTGCACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PVTGGSLSFTKIPSLRRNVPKVA*VRGAQQ Trigger: CTGCTGTGCACCCCTCACCCAGGCGACCTTCGGAAC...GTTCCTTCTTAGGGATGGTATCTTTGTGAAGGACAAGGAGCCCCCAGTCACTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR CCA 90 bp | CCAGTGACTGGGGGCTCCTTGTCCTTCACAAAGATACCATCCCTAAGAAGGAACGGAACTCCTGGGTGCTaGGCACCGCTCCTGTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PVTGGSLSFTKIPSLRRNGTPGC*APLLWS Trigger: TGACCACAGGAGCGGTGCCCAGCACCCAGGAGTTCC...GTTCCTTCTTAGGGATGGTATCTTTGTGAAGGACAAGGAGCCCCCAGTCACTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR CCA 90 bp | GAGTGTGGGTGTGAGTGTGGGTGTGGGTGGCACAAACCTGGACCCTTGGGGAACCACCTTCAACACAACTaGCACTCTGCTCACCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ECGCECGCGWHKPGPLGNHLQHN*HSAHLL Trigger: AAGCAGGTGAGCAGAGTGCCAGTTGTGTTGAAGGTG...GTTCCCCAAGGGTCCAGGTTTGTGCCACCCACACCCACACTCACACCCACACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR GCA 90 bp | CACCTTCTTCCCATCTGCTCTAAGGCTCTTTGGAGTCAGCCAGCCTCCTTGGAAGCCAGCCCGCCTTGCTaGGCTTGTAGAAAGGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HLLPICSKALWSQPASLEASPPC*ACRKGS Trigger: ACTTCCCTTTCTACAAGCGCAGCAAGGCGGGCTGGC...TTCCAAGGAGGCTGGCTGACTCCAAAGAGCCTTAGAGCAGATGGGAAGAAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR GCA 90 bp | ATGAAACATATGACCAGGGCCAGGTTTATCCCAACTCCTGGCTCCTTCTCTCCACCCAAGGGCGCTTTCTaGCCACGCAGTGCTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: MKHMTRARFIPTPGSFSPPKGAF*PRSASP Trigger: GGGAGAAGCACTGCGTGGGCAGAAAGCGCCCTTGGG...TGGAGAGAAGGAGCCAGGAGTTGGGATAAACCTGGCCCTGGTCATATGTTTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR GCA 90 bp | GCTGATGAAACATATGACCAGGGCCAGGTTTATCCCAACTCCTGGCTCCTTCTCGGCACTCTGCTCACCTaGTTGTGGAGGGCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ADETYDQGQVYPNSWLLLGTLLT*LWRAAA Trigger: TGCTGCTGCCCTCCACAAGCAGGTGAGCAGAGTGCC...GAGAAGGAGCCAGGAGTTGGGATAAACCTGGCCCTGGTCATATGTTTCATCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR GCA 90 bp | GCTGATGAAACATATGACCAGGGCCAGGTTTATCCCAACTCCTGGCTCCTTCTCTTTCTGCCCACGCAGTaGTTCTCCCTCCCACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: ADETYDQGQVYPNSWLLLFLPTQ*FSLPPP Trigger: TGGTGGTGGGAGGGAGAAGCACTGCGTGGGCAGAAA...GAGAAGGAGCCAGGAGTTGGGATAAACCTGGCCCTGGTCATATGTTTCATCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR CCA 90 bp | CCCAAGAGAGATTGCGGGTTGGTTGTGAGTTTAGTTAGGCGACATCATCACCTTGAGGGGTTAAGGGTCTaGGGAGCGTGGGTGGCGACT | + |
|
Preference number: 4 (lower is better) Translates to: PKRDCGLVVSLVRRHHHLEGLRV*GAWVAT Trigger: AGTCGCCACCCACGCTCCCCAGACCCTTAACCCCTC...AAGGTGATGATGTCGCCTAACTAAACTCACAACCAACCCGCAATCTCTCTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR CCA 90 bp | CCAGTGACTGGGGGCTCCTTGTCCTTCACAAAGATACCATCCCTAAGAAGGAACACAAACCTGGACCCTTaGGGAACTCCTGGGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PVTGGSLSFTKIPSLRRNTNLDP*GTPGCW Trigger: CCAGCACCCAGGAGTTCCCCAAGGGTCCAGGTTTGT...GTTCCTTCTTAGGGATGGTATCTTTGTGAAGGACAAGGAGCCCCCAGTCACTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR GCA 90 bp | ATGAAACATATGACCAGGGCCAGGTTTATCCCAACTCCTGGCTCCTTCTCTCCATCTGCCAGCCCGCCTTaGTGCGCTTGTAGAAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: MKHMTRARFIPTPGSFSPSASPP*CACRKG Trigger: TCCCTTTCTACAAGCGCAGCAAGGCGGGCTGGCAGA...TGGAGAGAAGGAGCCAGGAGTTGGGATAAACCTGGCCCTGGTCATATGTTTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR CCA 90 bp | ATGAAACATATGACCAGGGCCAGGTTTATCCCAACTCCTGGCTCCTTCTCTCCATGGGTGGCACAAACCTaGACCCTTGGGGAACTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: MKHMTRARFIPTPGSFSPWVAQT*TLGELL Trigger: CAGGAGTTCCCCAAGGGTCCAGGTTTGTGCCACCCA...TGGAGAGAAGGAGCCAGGAGTTGGGATAAACCTGGCCCTGGTCATATGTTTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| 3UTR CAA 72 bp | GCAGATCAGGAATACCTGCGTGGCTGGGGCTTAGGATaGCTAAACCAGCCTGTCCCACTCCAAAGTAACAGT | + |
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Preference number: 4 (lower is better) Translates to: ADQEYLRGWGLG*LNQPVPLQSNS Trigger: ACTGTTACTTTGGAGTGGGACAGGCTGGTTTAGCAATCCTAAGCCCCAGCCACGCAGGTATTCCTGATCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR GCA 90 bp | CCCAAGAGAGATTGCGGGTTGGTTGTGAGTTTAGTTAGGCGACATCATCACCTTCCAGGGAGTCCCAGATaGCACAAAGACTCAGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: PKRDCGLVVSLVRRHHHLPGSPR*HKDSGH Trigger: ATGCCCTGAGTCTTTGTGGCATCTGGGACTCCCTGG...AAGGTGATGATGTCGCCTAACTAAACTCACAACCAACCCGCAATCTCTCTTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR GCA 90 bp | CCCAAGAGAGATTGCGGGTTGGTTGTGAGTTTAGTTAGGCGACATCATCACCTTGACAGTCAGGAGCCCTaGTCTCATTTCCAGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PKRDCGLVVSLVRRHHHLDSQEP*SHFQHW Trigger: CCAGTGCTGGAAATGAGAGCAGGGCTCCTGACTGTC...AAGGTGATGATGTCGCCTAACTAAACTCACAACCAACCCGCAATCTCTCTTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR CCA 90 bp | CCAGTGACTGGGGGCTCCTTGTCCTTCACAAAGATACCATCCCTAAGAAGGAACGAATACCTGCGTGGCTaGGGCTTAGGATTGCTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PVTGGSLSFTKIPSLRRNEYLRG*GLGLLN Trigger: GTTTAGCAATCCTAAGCCCCAGCCACGCAGGTATTC...GTTCCTTCTTAGGGATGGTATCTTTGTGAAGGACAAGGAGCCCCCAGTCACTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR GCA 90 bp | CCAGTGACTGGGGGCTCCTTGTCCTTCACAAAGATACCATCCCTAAGAAGGAACATTTACACAGGAGGCTaGTGTTCAGGAGCTCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PVTGGSLSFTKIPSLRRNIYTGG*CSGALN Trigger: GTTCAGAGCTCCTGAACAGCAGCCTCCTGTGTAAAT...GTTCCTTCTTAGGGATGGTATCTTTGTGAAGGACAAGGAGCCCCCAGTCACTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR CCA 90 bp | GCTGATGAAACATATGACCAGGGCCAGGTTTATCCCAACTCCTGGCTCCTTCTCAGACCAAAACAAGTGTaGCCTTCCATGAGCCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ADETYDQGQVYPNSWLLLRPKQV*PSMSLC Trigger: ACACAGGCTCATGGAAGGCCACACTTGTTTTGGTCT...GAGAAGGAGCCAGGAGTTGGGATAAACCTGGCCCTGGTCATATGTTTCATCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS GCA 90 bp | GCAGTAGGTGGCCATGTCCAGCCGCGCCCGGGCCTGGGCCAGCGGTaGCGCACCGAAACTCACTGGCGACCCATCCAGCTTGGCCGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AVGGHVQPRPGLGQR*RTETHWRPIQLGRQ Trigger: CTGGCGGCCAAGCTGGATGGGTCGCCAGTGAGTTTCGGTGCGGCACCGCTGGCCCAGGCCCGGGCGCGGCTGGACATGGCCACCTACTGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS GCA 90 bp | GCTCATAGCAGAAGCGAAACCGGAGAAGCAGGTGGCGGCCTCGGGTaGGGATGGAGAGGGCGAGGCCTGCAGGTCCAGGCAAGCCGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: AHSRSETGEAGGGLG*GWRGRGLQVQASRA Trigger: AGCGCGGCTTGCCTGGACCTGCAGGCCTCGCCCTCTCCATCCGCACCCGAGGCCGCCACCTGCTTCTCCGGTTTCGCTTCTGCTATGAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR CAA 90 bp | ATGAAACATATGACCAGGGCCAGGTTTATCCCAACTCCTGGCTCCTTCTCTCCAGGCGACCCATCCAGCTaGGCCGCCAGCAGCGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: MKHMTRARFIPTPGSFSPGDPSS*AASSAR Trigger: CCGGGCGCTGCTGGCGGCCAAGCTGGATGGGTCGCC...TGGAGAGAAGGAGCCAGGAGTTGGGATAAACCTGGCCCTGGTCATATGTTTCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR CAA 90 bp | CAAACCTGGACCCTTGGGGAACTCCTGGGTGCTGGGCACCGCTCCTGTGGTCAGGTGACTGGGGGCTCCTaGTCCTTCACAAAGATACCA | + |
|
Preference number: 5 (lower is better) Translates to: QTWTLGELLGAGHRSCGQVTGGS*SFTKIP Trigger: TGGTATCTTTGTGAAGGACAAGGAGCCCCCAGTCAC...CTGACCACAGGAGCGGTGCCCAGCACCCAGGAGTTCCCCAAGGGTCCAGGTTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR CAA 90 bp | CCCACCAACGTCTCCATCTCCAGGGAGTCCCAGATGCCACAAAGACTCAGGGCAAGTCAGCCAGCCTCCTaGGAAAACGCTGGAGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PTNVSISRESQMPQRLRASQPAS*ENAGAE Trigger: CTCAGCTCCAGCGTTTTCCAAGGAGGCTGGCTGACT...TGCCCTGAGTCTTTGTGGCATCTGGGACTCCCTGGAGATGGAGACGTTGGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR CAA 90 bp | CCCACCAACGTCTCCATCTCCAGGGAGTCCCAGATGCCACAAAGACTCAGGGCAGGCTGGGGCTTAGGATaGCTAAACCAGCCTGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PTNVSISRESQMPQRLRAGWGLG*LNQPVP Trigger: TGGGACAGGCTGGTTTAGCAATCCTAAGCCCCAGCC...TGCCCTGAGTCTTTGTGGCATCTGGGACTCCCTGGAGATGGAGACGTTGGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR CAA 90 bp | GTGGGTGTGGGTGGCACAAACCTGGACCCTTGGGGAACTCCTGGGTGCTGGGCAAAGAGAGATTGCGGGTaGGTTGTGAGTTTAGTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: VGVGGTNLDPWGTPGCWAKRDCG*VVSLVR Trigger: CCTAACTAAACTCACAACCAACCCGCAATCTCTCTT...TGCCCAGCACCCAGGAGTTCCCCAAGGGTCCAGGTTTGTGCCACCCACACCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR CAA 90 bp | CCAGTGACTGGGGGCTCCTTGTCCTTCACAAAGATACCATCCCTAAGAAGGAACCACAAACCTGGACCCTaGGGGAACTCCTGGGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PVTGGSLSFTKIPSLRRNHKPGP*GNSWVL Trigger: CAGCACCCAGGAGTTCCCCAAGGGTCCAGGTTTGTG...GTTCCTTCTTAGGGATGGTATCTTTGTGAAGGACAAGGAGCCCCCAGTCACTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR CAA 90 bp | CCCACCAACGTCTCCATCTCCAGGGAGTCCCAGATGCCACAAAGACTCAGGGCAGCTCAAACTGTGGGTTaGGAGGGGAAAGAGACCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PTNVSISRESQMPQRLRAAQTVG*EGKETK Trigger: TTTGGTCTCTTTCCCCTCCAAACCCACAGTTTGAGC...TGCCCTGAGTCTTTGTGGCATCTGGGACTCCCTGGAGATGGAGACGTTGGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR CAA 90 bp | GTGGGTGTGGGTGGCACAAACCTGGACCCTTGGGGAACTCCTGGGTGCTGGGCATCTTCTTTAATTGTATaGCTTATGGGGAGTGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: VGVGGTNLDPWGTPGCWASSLIV*LMGSVP Trigger: GGGGACACTCCCCATAAGCAATACAATTAAAGAAGA...TGCCCAGCACCCAGGAGTTCCCCAAGGGTCCAGGTTTGTGCCACCCACACCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS-3UTR CAA 90 bp | CCAGTGACTGGGGGCTCCTTGTCCTTCACAAAGATACCATCCCTAAGAAGGAACAACACACGCACAGCTTaGGCTCAAACTGTGGGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PVTGGSLSFTKIPSLRRNNTRTA*AQTVGL Trigger: CAAACCCACAGTTTGAGCCAAAGCTGTGCGTGTGTT...GTTCCTTCTTAGGGATGGTATCTTTGTGAAGGACAAGGAGCCCCCAGTCACTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS CCA 72 bp | GCGGGGCCGAGGAGGGGCCCAGGTCGTCGCAGTAGGTaGCCATGTCCAGCCGCGCCCGGGCCTGGGCCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: AGPRRGPGRRSR*PCPAAPGPGPA Trigger: CGCTGGCCCAGGCCCGGGCGCGGCTGGACATGGCCACCTACTGCGACGACCTGGGCCCCTCCTCGGCCCCGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS GCA 72 bp | GGCCATGTCCAGCCGCGCCCGGGCCTGGGCCAGCGGTaGCGCACCGAAACTCACTGGCGACCCATCCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: GHVQPRPGLGQR*RTETHWRPIQL Trigger: AAGCTGGATGGGTCGCCAGTGAGTTTCGGTGCGGCACCGCTGGCCCAGGCCCGGGCGCGGCTGGACATGGCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS CCA 72 bp | GAAACCGGAGAAGCAGGTGGCGGCCTCGGGTGCGGATaGAGAGGGCGAGGCCTGCAGGTCCAGGCAAGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: ETGEAGGGLGCG*RGRGLQVQASR Trigger: GCGGCTTGCCTGGACCTGCAGGCCTCGCCCTCTCCATCCGCACCCGAGGCCGCCACCTGCTTCTCCGGTTTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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| CDS CCA 72 bp | GTTAAGGGTCTGGGGAGCGTGGGTGGCGACTGTCGGTaGCCGCCTCCCGAAAGAAAAGTCGCCCGCCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: VKGLGSVGGDCR*PPPERKVARQA Trigger: GGCCTGGCGGGCGACTTTTCTTTCGGGAGGCGGCCACCGACAGTCGCCACCCACGCTCCCCAGACCCTTAAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388920.5 |
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