Pregenerated sensors for FOXH1 (Homo sapiens)
Ensembl gene IDs: ENSG00000160973Ensembl transcript IDs: ENST00000377317.5, ENST00000525197.1
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CCCGTCTCCCAGGGCACAAGCTCCCTAGCCTCTTTGGATCCATTGCCCCTGAGCGCACGGGAGGGGAGGTaGCGGCTGGTGACTGATGGA | + |
|
Preference number: 2 (lower is better) Translates to: PVSQGTSSLASLDPLPLSAREGR*RLVTDG Trigger: TCCATCAGTCACCAGCCGTCACCTCCCCTCCCGTGC...GCTCAGGGGCAATGGATCCAAAGAGGCTAGGGAGCTTGTGCCCTGGGAGACGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| 3UTR-3UTR TCA 90 bp | AGCTCCCTAGCCTCTTTGGATCCATTGCCCCTGAGCTCCCAGAGTCACCCCTCCCATGACAGACCAGGGTaGGGGTTGTGCCCAGCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: SSLASLDPLPLSSQSHPSHDRPG*GLCPAG Trigger: CCCAGCTGGGCACAACCCTCACCCTGGTCTGTCATG...GGAGGGGTGACTCTGGGAGCTCAGGGGCAATGGATCCAAAGAGGCTAGGGAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| 3UTR-3UTR TCA 90 bp | GGCAGAGGCGGTAGTAAAGTCCCTGTACCCCGTCTCCCAGGGCACAAGCTCCCTTGGATCCATTGCCCCTaGGCTCCCAGAGTCACCCCT | + |
|
Preference number: 2 (lower is better) Translates to: GRGGSKVPVPRLPGHKLPWIHCP*APRVTP Trigger: AGGGGTGACTCTGGGAGCTCAGGGGCAATGGATCCA...AGGGAGCTTGTGCCCTGGGAGACGGGGTACAGGGACTTTACTACCGCCTCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| 3UTR-3UTR TCA 90 bp | AAGCTCCCTAGCCTCTTTGGATCCATTGCCCCTGAGCTCCCAGAGTCACCCCTCCACCTCCGCAGCCAGTaGAGTGTGTTGTGCCTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: KLPSLFGSIAPELPESPLHLRSQ*SVLCLL Trigger: CAGCAGGCACAACACACTTCACTGGCTGCGGAGGTG...GAGGGGTGACTCTGGGAGCTCAGGGGCAATGGATCCAAAGAGGCTAGGGAGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| 3UTR-3UTR GCA 90 bp | TTGGATCCATTGCCCCTGAGCTCCCAGAGTCACCCCTCCACCTCCGCAGCCAGTGTTTCCCGAAAAAGGTaGTACCTCCTTTCCAGACAG | + |
|
Preference number: 2 (lower is better) Translates to: LDPLPLSSQSHPSTSAASVSRKR*YLLSRQ Trigger: CTGTCTGGAAAGGAGGTAGCACCTTTTTCGGGAAAC...ACTGGCTGCGGAGGTGGAGGGGTGACTCTGGGAGCTCAGGGGCAATGGATCCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| 3UTR-3UTR GCA 90 bp | AGAGTCACCCCTCCACCTCCGCAGCCAGTGAAGTGTGTTGTGCCTGCTGAAGTGCTCCTTATCACCATTTaGTGTTATCACGGCACACAG | + |
|
Preference number: 2 (lower is better) Translates to: RVTPPPPQPVKCVVPAEVLLITI*CYHGTQ Trigger: CTGTGTGCCGTGATAACAGCAAATGGTGATAAGGAG...CACTTCAGCAGGCACAACACACTTCACTGGCTGCGGAGGTGGAGGGGTGACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| 3UTR-3UTR CCA 90 bp | CCCAAGTCACCACTCCTGACCCAAAAATCAGGCATGGCATTAAAACGTTGCAAAGGCCACGGCCATGCGTaGGGTGGCCCAATAAACACC | + |
|
Preference number: 2 (lower is better) Translates to: PKSPLLTQKSGMALKRCKGHGHA*GGPINT Trigger: GGTGTTTATTGGGCCACCCCACGCATGGCCGTGGCC...TTTGCAACGTTTTAATGCCATGCCTGATTTTTGGGTCAGGAGTGGTGACTTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| 3UTR-3UTR TCA 90 bp | TTCTCCTTATCACCATTTGCTGTTATCACGGCACACAGCAGGGAATCCCAGGCCCCAAGTCACCACTCCTaGCCCAAAAATCAGGCATGG | + |
|
Preference number: 2 (lower is better) Translates to: FSLSPFAVITAHSRESQAPSHHS*PKNQAW Trigger: CCATGCCTGATTTTTGGGTCAGGAGTGGTGACTTGG...GGCCTGGGATTCCCTGCTGTGTGCCGTGATAACAGCAAATGGTGATAAGGAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| 3UTR-3UTR CAA 90 bp | TTGGATCCATTGCCCCTGAGCTCCCAGAGTCACCCCTCCACCTCCGCAGCCAGTCCTGCTCCTGCAGCTTaGCCGCTGAGTGTAGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LDPLPLSSQSHPSTSAASPAPAA*PLSVGK Trigger: TTTTCCTACACTCAGCGGCAAAGCTGCAGGAGCAGG...ACTGGCTGCGGAGGTGGAGGGGTGACTCTGGGAGCTCAGGGGCAATGGATCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| 3UTR GCA 72 bp | CAGGCCACAGGTCTTGGCTTTCTCCTTATCACCATTTaGTGTTATCACGGCACACAGCAGGGAATCCCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: QATGLGFLLITI*CYHGTQQGIPG Trigger: GCCTGGGATTCCCTGCTGTGTGCCGTGATAACAGCAAATGGTGATAAGGAGAAAGCCAAGACCTGTGGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| CDS-3UTR TCA 90 bp | GGCAGAGGCGGTAGTAAAGTCCCTGTACCCCGTCTCCCAGGGCACAAGCTCCCTCTCTGGGGAGAGGGTTaGGGGCCCGATGGCTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GRGGSKVPVPRLPGHKLPLWGEG*GPDGSP Trigger: GGGGGAGCCATCGGGCCCTCAACCCTCTCCCCAGAG...AGGGAGCTTGTGCCCTGGGAGACGGGGTACAGGGACTTTACTACCGCCTCTGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| CDS-3UTR GCA 90 bp | AGAGTCACCCCTCCACCTCCGCAGCCAGTGAAGTGTGTTGTGCCTGCTGAAGTGCTGGGAGGGCGACTCTaGCTCTGGGGGCCCCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: RVTPPPPQPVKCVVPAEVLGGRL*LWGPQA Trigger: CGCCTGGGGCCCCCAGAGGCAGAGTCGCCCTCCCAG...CACTTCAGCAGGCACAACACACTTCACTGGCTGCGGAGGTGGAGGGGTGACTCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| CDS-3UTR CCA 90 bp | GGCAGAGGCGGTAGTAAAGTCCCTGTACCCCGTCTCCCAGGGCACAAGCTCCCTCCGGAGCGCCTCAGCTaGGATCAGGCTCACGTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: GRGGSKVPVPRLPGHKLPPERLS*DQAHVD Trigger: GTCGACGTGAGCCTGATCCCAGCTGAGGCGCTCCGG...AGGGAGCTTGTGCCCTGGGAGACGGGGTACAGGGACTTTACTACCGCCTCTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| CDS-3UTR TCA 90 bp | CCCGTCTCCCAGGGCACAAGCTCCCTAGCCTCTTTGGATCCATTGCCCCTGAGCCGGGAGGGAGCGGCCTaGATCACCAAGGCGATCATG | + |
|
Preference number: 4 (lower is better) Translates to: PVSQGTSSLASLDPLPLSREGAA*ITKAIM Trigger: CATGATCGCCTTGGTGATTCAGGCCGCTCCCTCCCG...GCTCAGGGGCAATGGATCCAAAGAGGCTAGGGAGCTTGTGCCCTGGGAGACGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| CDS-3UTR GCA 90 bp | AGCTCCCTAGCCTCTTTGGATCCATTGCCCCTGAGCTCCCAGAGTCACCCCTCCGGGCCAGCTTCAGTCTaGGGGAGGGAGCGGCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSLASLDPLPLSSQSHPSGPASV*GRERPE Trigger: TTCAGGCCGCTCCCTCCCGCAGACTGAAGCTGGCCC...GGAGGGGTGACTCTGGGAGCTCAGGGGCAATGGATCCAAAGAGGCTAGGGAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| CDS-3UTR GCA 90 bp | CCTGCTCCTGCAGCTTTGCCGCTGAGTGTAGGAAAAACAGGCATGACAGACCAGCGCGCACCTCCGTTCTaGCAGCGCCGGCACAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PAPAALPLSVGKTGMTDQRAPPF*QRRHRA Trigger: CGCCCTGTGCCGGCGCTGGCAGAACGGAGGTGCGCG...CTGGTCTGTCATGCCTGTTTTTCCTACACTCAGCGGCAAAGCTGCAGGAGCAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| CDS-3UTR CCA 90 bp | AGAGTCACCCCTCCACCTCCGCAGCCAGTGAAGTGTGTTGTGCCTGCTGAAGTGACTGGGCGGCCGGTATaGCCGGCCGTGCAGCACGTA | + |
|
Preference number: 4 (lower is better) Translates to: RVTPPPPQPVKCVVPAEVTGRPV*PAVQHV Trigger: TACGTGCTGCACGGCCGGCCATACCGGCCGCCCAGT...CACTTCAGCAGGCACAACACACTTCACTGGCTGCGGAGGTGGAGGGGTGACTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| CDS-3UTR CCA 90 bp | CCTGTACCCCGTCTCCCAGGGCACAAGCTCCCTAGCCTCTTTGGATCCATTGCCATCGCAGAGCAGCCCTaGGGGCCCTCGGGTTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PVPRLPGHKLPSLFGSIAIAEQP*GPSGFR Trigger: CCTGAAACCCGAGGGCCCCCAGGGCTGCTCTGCGAT...GGCAATGGATCCAAAGAGGCTAGGGAGCTTGTGCCCTGGGAGACGGGGTACAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| CDS-3UTR TCA 90 bp | AGCTCCCTAGCCTCTTTGGATCCATTGCCCCTGAGCTCCCAGAGTCACCCCTCCGGTCCCGAGGGTGGCTaGCCCAAACGTCGTAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: SSLASLDPLPLSSQSHPSGPEGG*PKRRRC Trigger: GCATCTACGACGTTTGGGTCAGCCACCCTCGGGACC...GGAGGGGTGACTCTGGGAGCTCAGGGGCAATGGATCCAAAGAGGCTAGGGAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| CDS-3UTR TCA 90 bp | GGCAGAGGCGGTAGTAAAGTCCCTGTACCCCGTCTCCCAGGGCACAAGCTCCCTCACCTCCGCAGCCAGTaGAGTGTGTTGTGCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRGGSKVPVPRLPGHKLPHLRSQ*SVLCLL Trigger: CAGCAGGCACAACACACTTCACTGGCTGCGGAGGTG...AGGGAGCTTGTGCCCTGGGAGACGGGGTACAGGGACTTTACTACCGCCTCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| CDS-3UTR GCA 90 bp | GGCAGAGGCGGTAGTAAAGTCCCTGTACCCCGTCTCCCAGGGCACAAGCTCCCTGGTCCTTGGGCACCTTaGGGAAGCATCGGTTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRGGSKVPVPRLPGHKLPGPWAP*GSIGWR Trigger: CCTCCAACCGATGCTTCCGCAAGGTGCCCAAGGACC...AGGGAGCTTGTGCCCTGGGAGACGGGGTACAGGGACTTTACTACCGCCTCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| CDS-3UTR GCA 90 bp | CCTGTACCCCGTCTCCCAGGGCACAAGCTCCCTAGCCTCTTTGGATCCATTGCCCTGCAGGAACTGGGCTaGTCTGTGGAGCTAGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PVPRLPGHKLPSLFGSIALQELG*SVELAP Trigger: CGGGGCTAGCTCCACAGAGCAGCCCAGTTCCTGCAG...GGCAATGGATCCAAAGAGGCTAGGGAGCTTGTGCCCTGGGAGACGGGGTACAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| 3UTR CAA 72 bp | TCCCAGGGCACAAGCTCCCTAGCCTCTTTGGATCCATaGCCCCTGAGCTCCCAGAGTCACCCCTCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQGTSSLASLDP*PLSSQSHPSTS Trigger: GGAGGTGGAGGGGTGACTCTGGGAGCTCAGGGGCAATGGATCCAAAGAGGCTAGGGAGCTTGTGCCCTGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| 3UTR CAA 72 bp | TACCCCGTCTCCCAGGGCACAAGCTCCCTAGCCTCTTaGGATCCATTGCCCCTGAGCTCCCAGAGTCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: YPVSQGTSSLAS*DPLPLSSQSHP Trigger: GGGGTGACTCTGGGAGCTCAGGGGCAATGGATCCAAAGAGGCTAGGGAGCTTGTGCCCTGGGAGACGGGGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| CDS-3UTR TCA 90 bp | AAGCTCCCTAGCCTCTTTGGATCCATTGCCCCTGAGCTCCCAGAGTCACCCCTCCATGACAGACCAGGGTaGGGGTTGTGCCCAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KLPSLFGSIAPELPESPLHDRPG*GLCPAG Trigger: CCCAGCTGGGCACAACCCTCACCCTGGTCTGTCATG...GAGGGGTGACTCTGGGAGCTCAGGGGCAATGGATCCAAAGAGGCTAGGGAGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| CDS-3UTR GCA 90 bp | AGCTCCCTAGCCTCTTTGGATCCATTGCCCCTGAGCTCCCAGAGTCACCCCTCCCTTGGCCTGGGGCTTTaGAGGGTCCTTGGGCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSLASLDPLPLSSQSHPSLGLGL*RVLGHL Trigger: AAGGTGCCCAAGGACCCTGCAAAGCCCCAGGCCAAG...GGAGGGGTGACTCTGGGAGCTCAGGGGCAATGGATCCAAAGAGGCTAGGGAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| CDS-3UTR CCA 90 bp | GTCCCTGTACCCCGTCTCCCAGGGCACAAGCTCCCTAGCCTCTTTGGATCCATTGGCCACGGCCATGCGTaGGGTGGCCCAATAAACACC | + |
|
Preference number: 4 (lower is better) Translates to: VPVPRLPGHKLPSLFGSIGHGHA*GGPINT Trigger: GGTGTTTATTGGGCCACCCCACGCATGGCCGTGGCC...AATGGATCCAAAGAGGCTAGGGAGCTTGTGCCCTGGGAGACGGGGTACAGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| CDS-3UTR TCA 90 bp | AGAGTCACCCCTCCACCTCCGCAGCCAGTGAAGTGTGTTGTGCCTGCTGAAGTGCCTGGACCTGACGGATaGTCTGGGCCAGCTTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RVTPPPPQPVKCVVPAEVPGPDG*SGPASV Trigger: GACTGAAGCTGGCCCAGATCATCCGTCAGGTCCAGG...CACTTCAGCAGGCACAACACACTTCACTGGCTGCGGAGGTGGAGGGGTGACTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| CDS-3UTR GCA 90 bp | CTCCTTATCACCATTTGCTGTTATCACGGCACACAGCAGGGAATCCCAGGCCCCCACAGGGCGGTGTTCTaGAGCCGGAGCGCCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLITICCYHGTQQGIPGPHRAVF*SRSASA Trigger: AGCTGAGGCGCTCCGGCTGCAGAACACCGCCCTGTG...GGGGCCTGGGATTCCCTGCTGTGTGCCGTGATAACAGCAAATGGTGATAAGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| CDS-3UTR TCA 90 bp | TCTCCTTATCACCATTTGCTGTTATCACGGCACACAGCAGGGAATCCCAGGCCCGCACGGGAGGGGAGGTaGCGGCTGGTGACTGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: SPYHHLLLSRHTAGNPRPAREGR*RLVTDG Trigger: TCCATCAGTCACCAGCCGTCACCTCCCCTCCCGTGC...GGGCCTGGGATTCCCTGCTGTGTGCCGTGATAACAGCAAATGGTGATAAGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| CDS-3UTR GCA 90 bp | TTCTCCTTATCACCATTTGCTGTTATCACGGCACACAGCAGGGAATCCCAGGCCCCCCGCCCCCAGCCCTaGATCAGGCCACAGGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FSLSPFAVITAHSRESQAPRPQP*IRPQVL Trigger: CAAGACCTGTGGCCTGATGCAGGGCTGGGGGCGGGG...GGCCTGGGATTCCCTGCTGTGTGCCGTGATAACAGCAAATGGTGATAAGGAGAA 59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| CDS-3UTR TCA 90 bp | CTCCTTATCACCATTTGCTGTTATCACGGCACACAGCAGGGAATCCCAGGCCCCTGGATCCATTGCCCCTaGGCTCCCAGAGTCACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLITICCYHGTQQGIPGPWIHCP*APRVTP Trigger: AGGGGTGACTCTGGGAGCTCAGGGGCAATGGATCCA...GGGGCCTGGGATTCCCTGCTGTGTGCCGTGATAACAGCAAATGGTGATAAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| CDS-3UTR CCA 90 bp | CGCCAAGTGGTTACCCAAGTCACCACTCCTGACCCAAAAATCAGGCATGGCATTCTCCTCTTAGGGGGCTaGGAGGGCGACTCTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RQVVTQVTTPDPKIRHGILLLGG*EGDSAS Trigger: AGAGGCAGAGTCGCCCTCCCAGCCCCCTAAGAGGAG...AATGCCATGCCTGATTTTTGGGTCAGGAGTGGTGACTTGGGTAACCACTTGGCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| CDS-3UTR CCA 90 bp | AGAGTCACCCCTCCACCTCCGCAGCCAGTGAAGTGTGTTGTGCCTGCTGAAGTGTGCGGAAGCATCGGTTaGAGGAAAGGTTGTGGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: RVTPPPPQPVKCVVPAEVCGSIG*RKGCGE Trigger: TTCGCCACAACCTTTCCTCCAACCGATGCTTCCGCA...CACTTCAGCAGGCACAACACACTTCACTGGCTGCGGAGGTGGAGGGGTGACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| CDS-3UTR CCA 90 bp | CTCCTTATCACCATTTGCTGTTATCACGGCACACAGCAGGGAATCCCAGGCCCCGCTTTGCAGGGTCCTTaGGCACCTTGCGGAAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: LLITICCYHGTQQGIPGPALQGP*APCGSI Trigger: GATGCTTCCGCAAGGTGCCCAAGGACCCTGCAAAGC...GGGGCCTGGGATTCCCTGCTGTGTGCCGTGATAACAGCAAATGGTGATAAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| CDS-3UTR CCA 90 bp | CTCCTTATCACCATTTGCTGTTATCACGGCACACAGCAGGGAATCCCAGGCCCCTCACCAAGGCGATCATaGCCAAGTAGGTGTAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLITICCYHGTQQGIPGPSPRRS*PSRCRG Trigger: CCCCCTACACCTACTTGGCCATGATCGCCTTGGTGA...GGGGCCTGGGATTCCCTGCTGTGTGCCGTGATAACAGCAAATGGTGATAAGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| CDS-3UTR GCA 90 bp | AGAGTCACCCCTCCACCTCCGCAGCCAGTGAAGTGTGTTGTGCCTGCTGAAGTGGTTTCCCGAAAAAGGTaGTACCTCCTTTCCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: RVTPPPPQPVKCVVPAEVVSRKR*YLLSRQ Trigger: CTGTCTGGAAAGGAGGTAGCACCTTTTTCGGGAAAC...CACTTCAGCAGGCACAACACACTTCACTGGCTGCGGAGGTGGAGGGGTGACTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| CDS-3UTR TCA 90 bp | CCCAAGTCACCACTCCTGACCCAAAAATCAGGCATGGCATTAAAACGTTGCAAAAACACGGCCTGGACCTaGCGGATGATCTGGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PKSPLLTQKSGMALKRCKNTAWT*RMIWAS Trigger: GCTGGCCCAGATCATCCGTCAGGTCCAGGCCGTGTT...TTTGCAACGTTTTAATGCCATGCCTGATTTTTGGGTCAGGAGTGGTGACTTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| CDS-3UTR GCA 90 bp | CCTGCTCCTGCAGCTTTGCCGCTGAGTGTAGGAAAAACAGGCATGACAGACCAGCTCCTTATCACCATTTaGTGTTATCACGGCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: PAPAALPLSVGKTGMTDQLLITI*CYHGTQ Trigger: CTGTGTGCCGTGATAACAGCAAATGGTGATAAGGAG...CTGGTCTGTCATGCCTGTTTTTCCTACACTCAGCGGCAAAGCTGCAGGAGCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| CDS-3UTR CCA 90 bp | TCTCCTTATCACCATTTGCTGTTATCACGGCACACAGCAGGGAATCCCAGGCCCTTGGAGGAAAGGTTGTaGCGAATGGAGTCTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPYHHLLLSRHTAGNPRPLEERL*RMESFQ Trigger: CTGGAAAGACTCCATTCGCCACAACCTTTCCTCCAA...GGGCCTGGGATTCCCTGCTGTGTGCCGTGATAACAGCAAATGGTGATAAGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| CDS-3UTR CAA 90 bp | TTGGATCCATTGCCCCTGAGCTCCCAGAGTCACCCCTCCACCTCCGCAGCCAGTGCTCTGGGGAGAGGGTaGAGGGCCCGATGGCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LDPLPLSSQSHPSTSAASALGRG*RARWLP Trigger: GGGGAGCCATCGGGCCCTCAACCCTCTCCCCAGAGC...ACTGGCTGCGGAGGTGGAGGGGTGACTCTGGGAGCTCAGGGGCAATGGATCCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| CDS-3UTR CAA 90 bp | AGCTCCCTAGCCTCTTTGGATCCATTGCCCCTGAGCTCCCAGAGTCACCCCTCCAGCTCCCTAGCCTCTTaGGATCCATTGCCCCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSLASLDPLPLSSQSHPSSSLAS*DPLPLS Trigger: GCTCAGGGGCAATGGATCCAAAGAGGCTAGGGAGCT...GGAGGGGTGACTCTGGGAGCTCAGGGGCAATGGATCCAAAGAGGCTAGGGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| CDS-3UTR CAA 90 bp | AGCTCCCTAGCCTCTTTGGATCCATTGCCCCTGAGCTCCCAGAGTCACCCCTCCTTGCGGAAGCATCGGTaGGAGGAAAGGTTGTGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: SSLASLDPLPLSSQSHPSLRKHR*EERLWR Trigger: TCGCCACAACCTTTCCTCCAACCGATGCTTCCGCAA...GGAGGGGTGACTCTGGGAGCTCAGGGGCAATGGATCCAAAGAGGCTAGGGAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| CDS-3UTR CAA 90 bp | GTCCCTGTACCCCGTCTCCCAGGGCACAAGCTCCCTAGCCTCTTTGGATCCATTGCCTCTTTGGATCCATaGCCCCTGAGCTCCCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: VPVPRLPGHKLPSLFGSIASLDP*PLSSQS Trigger: ACTCTGGGAGCTCAGGGGCAATGGATCCAAAGAGGC...AATGGATCCAAAGAGGCTAGGGAGCTTGTGCCCTGGGAGACGGGGTACAGGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| CDS-3UTR CAA 90 bp | TCTCCTTATCACCATTTGCTGTTATCACGGCACACAGCAGGGAATCCCAGGCCCGGGTCCTTGGGCACCTaGCGGAAGCATCGGTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SPYHHLLLSRHTAGNPRPGSLGT*RKHRLE Trigger: CTCCAACCGATGCTTCCGCAAGGTGCCCAAGGACCC...GGGCCTGGGATTCCCTGCTGTGTGCCGTGATAACAGCAAATGGTGATAAGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| CDS-3UTR CAA 90 bp | TCTCCTTATCACCATTTGCTGTTATCACGGCACACAGCAGGGAATCCCAGGCCCGGCTTTGCAGGGTCCTaGGGCACCTTGCGGAAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SPYHHLLLSRHTAGNPRPGFAGS*GTLRKH Trigger: ATGCTTCCGCAAGGTGCCCAAGGACCCTGCAAAGCC...GGGCCTGGGATTCCCTGCTGTGTGCCGTGATAACAGCAAATGGTGATAAGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| CDS-3UTR CAA 90 bp | CTCCTTATCACCATTTGCTGTTATCACGGCACACAGCAGGGAATCCCAGGCCCCCCTGCTCCTGCAGCTTaGCCGCTGAGTGTAGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LLITICCYHGTQQGIPGPPAPAA*PLSVGK Trigger: TTTTCCTACACTCAGCGGCAAAGCTGCAGGAGCAGG...GGGGCCTGGGATTCCCTGCTGTGTGCCGTGATAACAGCAAATGGTGATAAGGAG 56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| CDS-3UTR CAA 90 bp | CTCCTTATCACCATTTGCTGTTATCACGGCACACAGCAGGGAATCCCAGGCCCCTCTCCTTATCACCATTaGCTGTTATCACGGCACACA | + |
|
Preference number: 5 (lower is better) Translates to: LLITICCYHGTQQGIPGPSPYHH*LLSRHT Trigger: TGTGTGCCGTGATAACAGCAAATGGTGATAAGGAGA...GGGGCCTGGGATTCCCTGCTGTGTGCCGTGATAACAGCAAATGGTGATAAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377317.5 |
||
| CDS GCA 72 bp | CCAGCCCTCGTAGTCTTCCCTGGGCCAGCTTCAGTCTaGGGGAGGGAGCGGCCTGAATCACCAAGGCGATCA | + |
|
Preference number: 6 (lower is better) Translates to: PALVVFPGPASV*GRERPESPRRS Trigger: TGATCGCCTTGGTGATTCAGGCCGCTCCCTCCCGCAGACTGAAGCTGGCCCAGGGAAGACTACGAGGGCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525197.1 |
||