Pregenerated sensors for FOXF2-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000261730Ensembl transcript IDs: ENST00000568244.1
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TTCCGTAGCCCTCGGCGCGCACCCTCCCGCGTGCAGTGCCCGGAGTaGCCTCTTCAGGCCCCGCGGGCGCCTCCTGGGTGGGCCCCGCGG | + |
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Preference number: 5 (lower is better) Translates to: FRSPRRAPSRVQCPE*PLQAPRAPPGWAPR Trigger: CCGCGGGGCCCACCCAGGAGGCGCCCGCGGGGCCTGAAGAGGTCACTCCGGGCACTGCACGCGGGAGGGTGCGCGCCGAGGGCTACGGAA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000568244.1 |
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| CDS CCA 90 bp | GGACCTCCAGGGCGCTTCCCCGCGCGGCCGCAGCCGGCCAGCCTCTaGTCTCGGTTGGAGGGCATCGCAGGCGCGGCCTGGCGACCTCCG | + |
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Preference number: 5 (lower is better) Translates to: GPPGRFPARPQPASL*SRLEGIAGAAWRPP Trigger: CGGAGGTCGCCAGGCCGCGCCTGCGATGCCCTCCAACCGAGACCAGAGGCTGGCCGGCTGCGGCCGCGCGGGGAAGCGCCCTGGAGGTCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568244.1 |
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| CDS CCA 90 bp | GTTGGAGGGCATCGCAGGCGCGGCCTGGCGACCTCCGGGCGCCTTTaGCTGGTGTCTTCCGTAGCCCTCGGCGCGCACCCTCCCGCGTGC | + |
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Preference number: 5 (lower is better) Translates to: VGGHRRRGLATSGRL*LVSSVALGAHPPAC Trigger: GCACGCGGGAGGGTGCGCGCCGAGGGCTACGGAAGACACCAGCCAAAGGCGCCCGGAGGTCGCCAGGCCGCGCCTGCGATGCCCTCCAAC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568244.1 |
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| CDS GCA 90 bp | CTTTGGCTGGTGTCTTCCGTAGCCCTCGGCGCGCACCCTCCCGCGTaGAGTGCCCGGAGTGACCTCTTCAGGCCCCGCGGGCGCCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: LWLVSSVALGAHPPA*SARSDLFRPRGRLL Trigger: CAGGAGGCGCCCGCGGGGCCTGAAGAGGTCACTCCGGGCACTGCACGCGGGAGGGTGCGCGCCGAGGGCTACGGAAGACACCAGCCAAAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568244.1 |
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| CDS CCA 90 bp | GGCGAAGTCGAAGAGGTGCTCCGCCTGGTACCGCGGCCTGCGCACTaGGATCGGGGCCTGCAGGCCGCTGGGCTGGCTCCTGGGATCATC | + |
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Preference number: 5 (lower is better) Translates to: GEVEEVLRLVPRPAH*DRGLQAAGLAPGII Trigger: GATGATCCCAGGAGCCAGCCCAGCGGCCTGCAGGCCCCGATCCCAGTGCGCAGGCCGCGGTACCAGGCGGAGCACCTCTTCGACTTCGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568244.1 |
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| CDS CCA 90 bp | CCTGGTACCGCGGCCTGCGCACTGGGATCGGGGCCTGCAGGCCGCTaGGCTGGCTCCTGGGATCATCCCAAGGTTTTGGTCTCGCAACCG | + |
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Preference number: 5 (lower is better) Translates to: PGTAACALGSGPAGR*AGSWDHPKVLVSQP Trigger: CGGTTGCGAGACCAAAACCTTGGGATGATCCCAGGAGCCAGCCCAGCGGCCTGCAGGCCCCGATCCCAGTGCGCAGGCCGCGGTACCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000568244.1 |
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| CDS CCA 90 bp | CGGAGGGAAGGTGTGCAGAGCTCGGGGGTCTCCCAGGACGCAGCTTaGCTCCTACCGGTTTCCAAGGCATCTGCAAGCTCTGTCCTGCGA | + |
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Preference number: 5 (lower is better) Translates to: RREGVQSSGVSQDAA*LLPVSKASASSVLR Trigger: TCGCAGGACAGAGCTTGCAGATGCCTTGGAAACCGGTAGGAGCCAAGCTGCGTCCTGGGAGACCCCCGAGCTCTGCACACCTTCCCTCCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000568244.1 |
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| CDS TCA 90 bp | GGGACGTCCCTTCCAGCAGCATCAGTGGGCGAAAAGTTAACATGCTaGGGGCCACCGGCACCCACACTTGCTTCCAGGAATACTTGCGGT | + |
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Preference number: 5 (lower is better) Translates to: GTSLPAASVGEKLTC*GPPAPTLASRNTCG Trigger: ACCGCAAGTATTCCTGGAAGCAAGTGTGGGTGCCGGTGGCCCTCAGCATGTTAACTTTTCGCCCACTGATGCTGCTGGAAGGGACGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000568244.1 |
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| CDS CCA 72 bp | CCGCGCGGCCGCAGCCGGCCAGCCTCTGGTCTCGGTTaGAGGGCATCGCAGGCGCGGCCTGGCGACCTCCGG | + |
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Preference number: 6 (lower is better) Translates to: PRGRSRPASGLG*RASQARPGDLR Trigger: CCGGAGGTCGCCAGGCCGCGCCTGCGATGCCCTCCAACCGAGACCAGAGGCTGGCCGGCTGCGGCCGCGCGG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568244.1 |
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| CDS CAA 72 bp | CCCGCGCGGCCGCAGCCGGCCAGCCTCTGGTCTCGGTaGGAGGGCATCGCAGGCGCGGCCTGGCGACCTCCG | + |
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Preference number: 6 (lower is better) Translates to: PARPQPASLWSR*EGIAGAAWRPP Trigger: CGGAGGTCGCCAGGCCGCGCCTGCGATGCCCTCCAACCGAGACCAGAGGCTGGCCGGCTGCGGCCGCGCGGG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568244.1 |
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| CDS CAA 90 bp | GGGCGCTTCCCCGCGCGGCCGCAGCCGGCCAGCCTCTGGTCTCGGTaGGAGGGCATCGCAGGCGCGGCCTGGCGACCTCCGGGCGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: GRFPARPQPASLWSR*EGIAGAAWRPPGAF Trigger: AAAGGCGCCCGGAGGTCGCCAGGCCGCGCCTGCGATGCCCTCCAACCGAGACCAGAGGCTGGCCGGCTGCGGCCGCGCGGGGAAGCGCCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568244.1 |
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| CDS TCA 72 bp | CCTCGGCGCGCACCCTCCCGCGTGCAGTGCCCGGAGTaGCCTCTTCAGGCCCCGCGGGCGCCTCCTGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: PRRAPSRVQCPE*PLQAPRAPPGW Trigger: CCACCCAGGAGGCGCCCGCGGGGCCTGAAGAGGTCACTCCGGGCACTGCACGCGGGAGGGTGCGCGCCGAGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568244.1 |
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| CDS CAA 90 bp | GGTTGGAGGGCATCGCAGGCGCGGCCTGGCGACCTCCGGGCGCCTTaGGCTGGTGTCTTCCGTAGCCCTCGGCGCGCACCCTCCCGCGTG | + |
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Preference number: 6 (lower is better) Translates to: GWRASQARPGDLRAP*AGVFRSPRRAPSRV Trigger: CACGCGGGAGGGTGCGCGCCGAGGGCTACGGAAGACACCAGCCAAAGGCGCCCGGAGGTCGCCAGGCCGCGCCTGCGATGCCCTCCAACC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568244.1 |
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| CDS GCA 72 bp | GTGTCTTCCGTAGCCCTCGGCGCGCACCCTCCCGCGTaGAGTGCCCGGAGTGACCTCTTCAGGCCCCGCGGG | + |
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Preference number: 6 (lower is better) Translates to: VSSVALGAHPPA*SARSDLFRPRG Trigger: CCCGCGGGGCCTGAAGAGGTCACTCCGGGCACTGCACGCGGGAGGGTGCGCGCCGAGGGCTACGGAAGACAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568244.1 |
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| CDS CCA 72 bp | GACCAGCCAGACGGGAGAAGAAAGCCCTGCCCGGGCTaGGTTGGGACCTCCAGGGCGCTTCCCCGCGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: DQPDGRRKPCPG*VGTSRALPRAA Trigger: GGCCGCGCGGGGAAGCGCCCTGGAGGTCCCAACCCAGCCCGGGCAGGGCTTTCTTCTCCCGTCTGGCTGGTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568244.1 |
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| CDS GCA 72 bp | GAGCGTTGCCACAGCCGGGAGGGCGGAGGGAAGGTGTaGAGAGCTCGGGGGTCTCCCAGGACGCAGCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: ERCHSREGGGKV*RARGSPRTQLG Trigger: GCCAAGCTGCGTCCTGGGAGACCCCCGAGCTCTGCACACCTTCCCTCCGCCCTCCCGGCTGTGGCAACGCTC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000568244.1 |
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| CDS CCA 72 bp | CTCTGGTCTCGGTTGGAGGGCATCGCAGGCGCGGCCTaGCGACCTCCGGGCGCCTTTGGCTGGTGTCTTCCG | + |
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Preference number: 6 (lower is better) Translates to: LWSRLEGIAGAA*RPPGAFGWCLP Trigger: CGGAAGACACCAGCCAAAGGCGCCCGGAGGTCGCCAGGCCGCGCCTGCGATGCCCTCCAACCGAGACCAGAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568244.1 |
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| CDS CAA 72 bp | GGCCGCTGGGCTGGCTCCTGGGATCATCCCAAGGTTTaGGTCTCGCAACCGAGGGGACCCGCGCCCGGCAAT | + |
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Preference number: 6 (lower is better) Translates to: GRWAGSWDHPKV*VSQPRGPAPGN Trigger: ATTGCCGGGCGCGGGTCCCCTCGGTTGCGAGACCAAAACCTTGGGATGATCCCAGGAGCCAGCCCAGCGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568244.1 |
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| CDS CAA 90 bp | GGGCCTGCAGGCCGCTGGGCTGGCTCCTGGGATCATCCCAAGGTTTaGGTCTCGCAACCGAGGGGACCCGCGCCCGGCAATTTGGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: GPAGRWAGSWDHPKV*VSQPRGPAPGNLGS Trigger: ACTTCCCAAATTGCCGGGCGCGGGTCCCCTCGGTTGCGAGACCAAAACCTTGGGATGATCCCAGGAGCCAGCCCAGCGGCCTGCAGGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568244.1 |
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| CDS CAA 90 bp | GCGGAGGGAAGGTGTGCAGAGCTCGGGGGTCTCCCAGGACGCAGCTaGGCTCCTACCGGTTTCCAAGGCATCTGCAAGCTCTGTCCTGCG | + |
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Preference number: 6 (lower is better) Translates to: AEGRCAELGGLPGRS*APTGFQGICKLCPA Trigger: CGCAGGACAGAGCTTGCAGATGCCTTGGAAACCGGTAGGAGCCAAGCTGCGTCCTGGGAGACCCCCGAGCTCTGCACACCTTCCCTCCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000568244.1 |
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| CDS TCA 72 bp | CCCGCGCCCGGCAATTTGGGAAGTGCGGAAATGGGGTaGGGCCGGTCTTCGCTTGAGGGTCTCGTAGATTGG | + |
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Preference number: 6 (lower is better) Translates to: PAPGNLGSAEMG*GRSSLEGLVDW Trigger: CCAATCTACGAGACCCTCAAGCGAAGACCGGCCTCACCCCATTTCCGCACTTCCCAAATTGCCGGGCGCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568244.1 |
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| CDS CCA 72 bp | GGTGTGCAGAGCTCGGGGGTCTCCCAGGACGCAGCTTaGCTCCTACCGGTTTCCAAGGCATCTGCAAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: GVQSSGVSQDAA*LLPVSKASASS Trigger: AGAGCTTGCAGATGCCTTGGAAACCGGTAGGAGCCAAGCTGCGTCCTGGGAGACCCCCGAGCTCTGCACACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000568244.1 |
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| CDS CAA 72 bp | AGGTGTGCAGAGCTCGGGGGTCTCCCAGGACGCAGCTaGGCTCCTACCGGTTTCCAAGGCATCTGCAAGCTC | + |
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Preference number: 6 (lower is better) Translates to: RCAELGGLPGRS*APTGFQGICKL Trigger: GAGCTTGCAGATGCCTTGGAAACCGGTAGGAGCCAAGCTGCGTCCTGGGAGACCCCCGAGCTCTGCACACCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000568244.1 |
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| CDS CAA 72 bp | TATCCTGAGCTCGGCGGGGAGGACGAGAGGGGAGTTTaGATGCGCCAGGAAGTTCATCTATCGCCCAGGCGC | + |
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Preference number: 6 (lower is better) Translates to: YPELGGEDERGV*MRQEVHLSPRR Trigger: GCGCCTGGGCGATAGATGAACTTCCTGGCGCATCAAAACTCCCCTCTCGTCCTCCCCGCCGAGCTCAGGATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000568244.1 |
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| CDS CCA 72 bp | ACTCTGTTCCAACCTAAGCCCCTTCTCTCTGCCTTTTaGACAAAGCGGGCCGCCTCTGCTCTCCACTCACTC | + |
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Preference number: 6 (lower is better) Translates to: TLFQPKPLLSAF*TKRAASALHSL Trigger: GAGTGAGTGGAGAGCAGAGGCGGCCCGCTTTGTCCAAAAGGCAGAGAGAAGGGGCTTAGGTTGGAACAGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000568244.1 |
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| CDS CCA 72 bp | AAGGCATCTGCAAGCTCTGTCCTGCGACCTAAAGCATaGGGACGTCCCTTCCAGCAGCATCAGTGGGCGAAA | + |
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Preference number: 6 (lower is better) Translates to: KASASSVLRPKA*GRPFQQHQWAK Trigger: TTTCGCCCACTGATGCTGCTGGAAGGGACGTCCCCATGCTTTAGGTCGCAGGACAGAGCTTGCAGATGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568244.1 |
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| CDS TCA 72 bp | CTTCCAGCAGCATCAGTGGGCGAAAAGTTAACATGCTaGGGGCCACCGGCACCCACACTTGCTTCCAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: LPAASVGEKLTC*GPPAPTLASRN Trigger: ATTCCTGGAAGCAAGTGTGGGTGCCGGTGGCCCTCAGCATGTTAACTTTTCGCCCACTGATGCTGCTGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000568244.1 |
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| CDS CAA 90 bp | AACATGCTGAGGGCCACCGGCACCCACACTTGCTTCCAGGAATACTaGCGGTACAGGCTTCCTGACTTATTTTCTTTAGCCGCTGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: NMLRATGTHTCFQEY*RYRLPDLFSLAAGC Trigger: GCACCCAGCGGCTAAAGAAAATAAGTCAGGAAGCCTGTACCGCAAGTATTCCTGGAAGCAAGTGTGGGTGCCGGTGGCCCTCAGCATGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568244.1 |
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| CDS CAA 72 bp | AGGGCCACCGGCACCCACACTTGCTTCCAGGAATACTaGCGGTACAGGCTTCCTGACTTATTTTCTTTAGCC | + |
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Preference number: 6 (lower is better) Translates to: RATGTHTCFQEY*RYRLPDLFSLA Trigger: GGCTAAAGAAAATAAGTCAGGAAGCCTGTACCGCAAGTATTCCTGGAAGCAAGTGTGGGTGCCGGTGGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568244.1 |
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