Pregenerated sensors for FOXD3 (Homo sapiens)
Ensembl gene IDs: ENSG00000187140Ensembl transcript IDs: ENST00000371116.4
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAGAGGCAGAGTCCAGGATTGGGCAGCGGGACCGGGACCGGGCTTaGGACAGGGCGCGCAGCCTGGAGGTGCATTTGTTGCTCGAGGCC | + |
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Preference number: 1 (lower is better) Translates to: GEAESRIGQRDRDRA*DRARSLEVHLLLEA Trigger: GGCCTCGAGCAACAAATGCACCTCCAGGCTGCGCGCCCTGTCCCAAGCCCGGTCCCGGTCCCGCTGCCCAATCCTGGACTCTGCCTCTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| 3UTR CAA 90 bp | GGGAGAGGCAGAGTCCAGGATTGGGCAGCGGGACCGGGACCGGGCTaGGGACAGGGCGCGCAGCCTGGAGGTGCATTTGTTGCTCGAGGC | + |
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Preference number: 2 (lower is better) Translates to: GRGRVQDWAAGPGPG*GQGAQPGGAFVARG Trigger: GCCTCGAGCAACAAATGCACCTCCAGGCTGCGCGCCCTGTCCCAAGCCCGGTCCCGGTCCCGCTGCCCAATCCTGGACTCTGCCTCTCCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| 3UTR-3UTR GCA 90 bp | GGGAAAGGAAATTGGGGAGAGGCAGAGTCCAGGATTGGGCAGCGGGACCGGGACTGGAGGTGCATTTGTTaGTCGAGGCCGCCGCCGGAC | + |
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Preference number: 2 (lower is better) Translates to: GKGNWGEAESRIGQRDRDWRCIC*SRPPPD Trigger: GTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCA...GTCCCGGTCCCGCTGCCCAATCCTGGACTCTGCCTCTCCCCAATTTCCTTTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| 3UTR-3UTR CCA 90 bp | GTATGGAAAGCTATCCCCGGCGGGCGCGCGGTGAGTTTGCTCGACCAGCTTAGGGCGGAAGGTAGGCGTTaGGGGCTCAGGGGAAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: VWKAIPGGRAVSLLDQLRAEGRR*GLRGKE Trigger: TTCCTTTCCCCTGAGCCCCCAACGCCTACCTTCCGC...CCTAAGCTGGTCGAGCAAACTCACCGCGCGCCCGCCGGGGATAGCTTTCCATAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| 3UTR-3UTR CCA 90 bp | TCGGTTTTACCTGTATGGAAAGCTATCCCCGGCGGGCGCGCGGTGAGTTTGCTCACAGGGCGCGCAGCCTaGAGGTGCATTTGTTGCTCG | + |
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Preference number: 2 (lower is better) Translates to: SVLPVWKAIPGGRAVSLLTGRAA*RCICCS Trigger: CGAGCAACAAATGCACCTCCAGGCTGCGCGCCCTGT...GAGCAAACTCACCGCGCGCCCGCCGGGGATAGCTTTCCATACAGGTAAAACCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| 3UTR CCA 72 bp | GGGACCGGGACCGGGCTTGGGACAGGGCGCGCAGCCTaGAGGTGCATTTGTTGCTCGAGGCCGCCGCCGGAC | + |
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Preference number: 3 (lower is better) Translates to: GTGTGLGTGRAA*RCICCSRPPPD Trigger: GTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCAGGCTGCGCGCCCTGTCCCAAGCCCGGTCCCGGTCCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| 3UTR CCA 72 bp | GAGTCCAGGATTGGGCAGCGGGACCGGGACCGGGCTTaGGACAGGGCGCGCAGCCTGGAGGTGCATTTGTTG | + |
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Preference number: 3 (lower is better) Translates to: ESRIGQRDRDRA*DRARSLEVHLL Trigger: CAACAAATGCACCTCCAGGCTGCGCGCCCTGTCCCAAGCCCGGTCCCGGTCCCGCTGCCCAATCCTGGACTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| 3UTR TCA 72 bp | TACCTGTATGGAAAGCTATCCCCGGCGGGCGCGCGGTaGGTTTGCTCGACCAGCTTAGGTGTGCGCGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: YLYGKLSPAGAR*VCSTSLGVREG Trigger: CCCCTCGCGCACACCTAAGCTGGTCGAGCAAACTCACCGCGCGCCCGCCGGGGATAGCTTTCCATACAGGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR GCA 90 bp | GGGCGCGCAGCCTGGAGGTGCATTTGTTGCTCGAGGCCGCCGCCGGACCCTGGGCGCCAACACCGCCCTTaGAGCCGTCCGCCTCCGGCG | + |
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Preference number: 4 (lower is better) Translates to: GRAAWRCICCSRPPPDPGRQHRP*SRPPPA Trigger: CGCCGGAGGCGGACGGCTGCAAGGGCGGTGTTGGCG...CCCAGGGTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCAGGCTGCGCGCCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR TCA 90 bp | AGGGCGCGCAGCCTGGAGGTGCATTTGTTGCTCGAGGCCGCCGCCGGACCCTGGGCCCGGGCCGAGCTGTaGGCCGAAGGCGGCCGCTTT | + |
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Preference number: 4 (lower is better) Translates to: RARSLEVHLLLEAAAGPWARAEL*AEGGRF Trigger: AAAGCGGCCGCCTTCGGCTCACAGCTCGGCCCGGGC...CCAGGGTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCAGGCTGCGCGCCCT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR GCA 90 bp | GGGCGCGCAGCCTGGAGGTGCATTTGTTGCTCGAGGCCGCCGCCGGACCCTGGGACGACTGCGCCGTGCTaGCGCCCCCTGAACCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: GRAAWRCICCSRPPPDPGTTAPC*RPLNPQ Trigger: CTGGGGGTTCAGGGGGCGGCAGCACGGCGCAGTCGT...CCCAGGGTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCAGGCTGCGCGCCC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR CCA 90 bp | CAGCCTGGAGGTGCATTTGTTGCTCGAGGCCGCCGCCGGACCCTGGGTCCCGGCGGCCGGACATGTCGCTaGCGCTGCCGCCGCCGGAGA | + |
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Preference number: 4 (lower is better) Translates to: QPGGAFVARGRRRTLGPGGRTCR*RCRRRR Trigger: TCTCCGGCGGCGGCAGCGCCAGCGACATGTCCGGCC...GCCGGGACCCAGGGTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCAGGCTG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR GCA 90 bp | GGGCGCGCAGCCTGGAGGTGCATTTGTTGCTCGAGGCCGCCGCCGGACCCTGGGCGCTCCGCGAACTCCTaGCGTCCCTGGCGCTCGGTA | + |
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Preference number: 4 (lower is better) Translates to: GRAAWRCICCSRPPPDPGRSANS*RPWRSV Trigger: TACCGAGCGCCAGGGACGGCAGGAGTTCGCGGAGCG...CCCAGGGTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCAGGCTGCGCGCCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR GCA 90 bp | GGGCGCGCAGCCTGGAGGTGCATTTGTTGCTCGAGGCCGCCGCCGGACCCTGGGGGCTGTTCTTGGGCTTaGTCGGGGCCAGGCCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: GRAAWRCICCSRPPPDPGGCSWA*SGPGLP Trigger: CGGGAGGCCTGGCCCCGAGCAAGCCCAAGAACAGCC...CCCAGGGTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCAGGCTGCGCGCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR GCA 90 bp | CAGCCTGGAGGTGCATTTGTTGCTCGAGGCCGCCGCCGGACCCTGGGTCCCGGCGGCCGCAGAAACGACTaGGCCGTGCTGCCGCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: QPGGAFVARGRRRTLGPGGRRND*AVLPPP Trigger: AGGGGGCGGCAGCACGGCGCAGTCGTTTCTGCGGCC...GCCGGGACCCAGGGTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCAGGCTG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR GCA 90 bp | CAGCCTGGAGGTGCATTTGTTGCTCGAGGCCGCCGCCGGACCCTGGGTCCCGGCATGAGCGCTGCCGACTaGACGGTCCCGGGTGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: QPGGAFVARGRRRTLGPGMSAAD*TVPGGR Trigger: GCGGCCACCCGGGACCGTGCAGTCGGCAGCGCTCAT...GCCGGGACCCAGGGTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCAGGCTG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR GCA 90 bp | CAGCCTGGAGGTGCATTTGTTGCTCGAGGCCGCCGCCGGACCCTGGGTCCCGGCGGTGGCCATGAGCGCTaGCGACTGCACGGTCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: QPGGAFVARGRRRTLGPGGGHER*RLHGPG Trigger: CCCGGGACCGTGCAGTCGGCAGCGCTCATGGCCACC...GCCGGGACCCAGGGTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCAGGCTG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR GCA 90 bp | CAGCCTGGAGGTGCATTTGTTGCTCGAGGCCGCCGCCGGACCCTGGGTCCCGGCGGCGGCGGCCGAGGCTaGGGGCTGCAGAAACTGTCC | + |
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Preference number: 4 (lower is better) Translates to: QPGGAFVARGRRRTLGPGGGGRG*GLQKLS Trigger: GGACAGTTTCTGCAGCCCGCAGCCTCGGCCGCCGCC...GCCGGGACCCAGGGTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCAGGCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR CCA 90 bp | CAGCCTGGAGGTGCATTTGTTGCTCGAGGCCGCCGCCGGACCCTGGGTCCCGGCAGCGCGTACGGGTACTaGAGCGCCGCCGCAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: QPGGAFVARGRRRTLGPGSAYGY*SAAAAA Trigger: GGCTGCTGCGGCGGCGCTCCAGTACCCGTACGCGCT...GCCGGGACCCAGGGTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCAGGCTG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR CCA 90 bp | GGGCGCGCAGCCTGGAGGTGCATTTGTTGCTCGAGGCCGCCGCCGGACCCTGGGCTGCACGGTCCCGGGTaGCCGCAGAAACGACTGCGC | + |
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Preference number: 4 (lower is better) Translates to: GRAAWRCICCSRPPPDPGLHGPG*PQKRLR Trigger: GCGCAGTCGTTTCTGCGGCCACCCGGGACCGTGCAG...CCCAGGGTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCAGGCTGCGCGCCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR TCA 90 bp | GCAGCCTGGAGGTGCATTTGTTGCTCGAGGCCGCCGCCGGACCCTGGGTCCCGGGTTGGTGGGTGGCCATaGGCGCTGCCGACTGCACGG | + |
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Preference number: 4 (lower is better) Translates to: AAWRCICCSRPPPDPGSRVGGWP*ALPTAR Trigger: CCGTGCAGTCGGCAGCGCTCATGGCCACCCACCAAC...CCGGGACCCAGGGTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCAGGCTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR TCA 90 bp | AGGGCGCGCAGCCTGGAGGTGCATTTGTTGCTCGAGGCCGCCGCCGGACCCTGGCCGGCGGGCGCGCGGTaGGTTTGCTCGACCAGCTTA | + |
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Preference number: 4 (lower is better) Translates to: RARSLEVHLLLEAAAGPWPAGAR*VCSTSL Trigger: TAAGCTGGTCGAGCAAACTCACCGCGCGCCCGCCGG...CCAGGGTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCAGGCTGCGCGCCCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR GCA 90 bp | GCAGCCTGGAGGTGCATTTGTTGCTCGAGGCCGCCGCCGGACCCTGGGTCCCGGACATGTCGCTGGCGCTaGCGCCGCCGGAGAGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: AAWRCICCSRPPPDPGSRTCRWR*RRRRGS Trigger: TGACCCTCTCCGGCGGCGGCAGCGCCAGCGACATGT...CCGGGACCCAGGGTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCAGGCTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR CCA 90 bp | CAGCCTGGAGGTGCATTTGTTGCTCGAGGCCGCCGCCGGACCCTGGGTCCCGGCTGGCTTGGGGCCCGCTaGGCTCAGCTCACACTCGGC | + |
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Preference number: 4 (lower is better) Translates to: QPGGAFVARGRRRTLGPGWLGAR*AQLTLG Trigger: GCCGAGTGTGAGCTGAGCCCAGCGGGCCCCAAGCCA...GCCGGGACCCAGGGTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCAGGCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR CCA 90 bp | GCAGCCTGGAGGTGCATTTGTTGCTCGAGGCCGCCGCCGGACCCTGGGTCCCGGGCCGTCAGCACCGTCTaGCCGGACATGTCGCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: AAWRCICCSRPPPDPGSRAVSTV*PDMSLA Trigger: CGCCAGCGACATGTCCGGCCAGACGGTGCTGACGGC...CCGGGACCCAGGGTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCAGGCTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR GCA 90 bp | GGGCGCGCAGCCTGGAGGTGCATTTGTTGCTCGAGGCCGCCGCCGGACCCTGGGCGCGCAGCCTGGAGGTaGATTTGTTGCTCGAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: GRAAWRCICCSRPPPDPGRAAWR*ICCSRP Trigger: CGGCCTCGAGCAACAAATGCACCTCCAGGCTGCGCG...CCCAGGGTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCAGGCTGCGCGCCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR CCA 90 bp | GCAGCCTGGAGGTGCATTTGTTGCTCGAGGCCGCCGCCGGACCCTGGGTCCCGGAGCGACAGCGGTTGGTaGGTGGCCATGAGCGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: AAWRCICCSRPPPDPGSRSDSGW*VAMSAA Trigger: GGCAGCGCTCATGGCCACCCACCAACCGCTGTCGCT...CCGGGACCCAGGGTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCAGGCTGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR TCA 90 bp | CAGCCTGGAGGTGCATTTGTTGCTCGAGGCCGCCGCCGGACCCTGGGTCCCGGCCGAAGCTCTGCATCATaGGCGCCGTCTGCTCGCGCA | + |
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Preference number: 4 (lower is better) Translates to: QPGGAFVARGRRRTLGPGRSSAS*APSARA Trigger: TGCGCGAGCAGACGGCGCTCATGATGCAGAGCTTCG...GCCGGGACCCAGGGTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCAGGCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR GCA 90 bp | AGGGCGCGCAGCCTGGAGGTGCATTTGTTGCTCGAGGCCGCCGCCGGACCCTGGTGGAGGTGCATTTGTTaGTCGAGGCCGCCGCCGGAC | + |
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Preference number: 4 (lower is better) Translates to: RARSLEVHLLLEAAAGPWWRCIC*SRPPPD Trigger: GTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCA...CCAGGGTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCAGGCTGCGCGCCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR CCA 90 bp | AGGGCGCGCAGCCTGGAGGTGCATTTGTTGCTCGAGGCCGCCGCCGGACCCTGGCTCAGCGACAGCGGTTaGTGGGTGGCCATGAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: RARSLEVHLLLEAAAGPWLSDSG*WVAMSA Trigger: AGCGCTCATGGCCACCCACCAACCGCTGTCGCTGAG...CCAGGGTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCAGGCTGCGCGCCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR CCA 90 bp | GGGCGCGCAGCCTGGAGGTGCATTTGTTGCTCGAGGCCGCCGCCGGACCCTGGGGCGGAAGGTAGGCGTTaGGGGCTCAGGGGAAAGGAA | + |
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Preference number: 4 (lower is better) Translates to: GRAAWRCICCSRPPPDPGAEGRR*GLRGKE Trigger: TTCCTTTCCCCTGAGCCCCCAACGCCTACCTTCCGC...CCCAGGGTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCAGGCTGCGCGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR TCA 90 bp | GTATGGAAAGCTATCCCCGGCGGGCGCGCGGTGAGTTTGCTCGACCAGCTTAGGGCCGGCCATTTGGCTTaGGCGGCGGCCGCAGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: VWKAIPGGRAVSLLDQLRAGHLA*AAAAAA Trigger: CGCTGCTGCGGCCGCCGCTCAAGCCAAATGGCCGGC...CCTAAGCTGGTCGAGCAAACTCACCGCGCGCCCGCCGGGGATAGCTTTCCATAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR CCA 90 bp | GCAGCCTGGAGGTGCATTTGTTGCTCGAGGCCGCCGCCGGACCCTGGGTCCCGGTCACTAGGCTGTTCTTaGGCTTGCTCGGGGCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: AAWRCICCSRPPPDPGSRSLGCS*ACSGPG Trigger: GCCTGGCCCCGAGCAAGCCCAAGAACAGCCTAGTGA...CCGGGACCCAGGGTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCAGGCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR CCA 90 bp | CAGCCTGGAGGTGCATTTGTTGCTCGAGGCCGCCGCCGGACCCTGGGTCCCGGCAGGTGCTCCTGCTGGTaGCGCTTGAAGCGTTTCCGG | + |
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Preference number: 4 (lower is better) Translates to: QPGGAFVARGRRRTLGPGRCSCW*RLKRFR Trigger: CCGGAAACGCTTCAAGCGCCACCAGCAGGAGCACCT...GCCGGGACCCAGGGTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCAGGCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR GCA 90 bp | AGGGCGCGCAGCCTGGAGGTGCATTTGTTGCTCGAGGCCGCCGCCGGACCCTGGGGGGCTATCGCAACCTaGGTCGCTGTCCTTCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: RARSLEVHLLLEAAAGPWGAIAT*VAVLLF Trigger: GAAGAGAAGGACAGCGACGCAGGTTGCGATAGCCCC...CCAGGGTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCAGGCTGCGCGCCCT 67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR CCA 90 bp | GAAATTGGGGAGAGGCAGAGTCCAGGATTGGGCAGCGGGACCGGGACCGGGCTTGTGTGCGCGAGGGGATaGAGGCCGCGGAAGGTAGGC | + |
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Preference number: 4 (lower is better) Translates to: EIGERQSPGLGSGTGTGLVCARG*RPRKVG Trigger: GCCTACCTTCCGCGGCCTCCATCCCCTCGCGCACAC...AAGCCCGGTCCCGGTCCCGCTGCCCAATCCTGGACTCTGCCTCTCCCCAATTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| 3UTR CAA 72 bp | AGAGTCCAGGATTGGGCAGCGGGACCGGGACCGGGCTaGGGACAGGGCGCGCAGCCTGGAGGTGCATTTGTT | + |
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Preference number: 4 (lower is better) Translates to: RVQDWAAGPGPG*GQGAQPGGAFV Trigger: AACAAATGCACCTCCAGGCTGCGCGCCCTGTCCCAAGCCCGGTCCCGGTCCCGCTGCCCAATCCTGGACTCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR TCA 90 bp | GTATGGAAAGCTATCCCCGGCGGGCGCGCGGTGAGTTTGCTCGACCAGCTTAGGCCTGCTGGTGGCGCTTaGAGCGTTTCCGGCGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: VWKAIPGGRAVSLLDQLRPAGGA*SVSGAA Trigger: TGCGGCGCCGGAAACGCTTCAAGCGCCACCAGCAGG...CCTAAGCTGGTCGAGCAAACTCACCGCGCGCCCGCCGGGGATAGCTTTCCATAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR GCA 90 bp | TCGGTTTTACCTGTATGGAAAGCTATCCCCGGCGGGCGCGCGGTGAGTTTGCTCCGAAGGCGGCCGCTTTaGGGCCCAGCTCGCCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: SVLPVWKAIPGGRAVSLLRRRPL*GPARPR Trigger: CCTCGGGCGAGCTGGGCCGCAAAGCGGCCGCCTTCG...GAGCAAACTCACCGCGCGCCCGCCGGGGATAGCTTTCCATACAGGTAAAACCGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR GCA 90 bp | GGGAAAGGAAATTGGGGAGAGGCAGAGTCCAGGATTGGGCAGCGGGACCGGGACCCCAGGCTATTGAGCTaGAGCTGCAGGCCCGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: GKGNWGEAESRIGQRDRDPRLLS*SCRPGP Trigger: CGGCCCGGGCCTGCAGCTGCAGCTCAATAGCCTGGG...GTCCCGGTCCCGCTGCCCAATCCTGGACTCTGCCTCTCCCCAATTTCCTTTCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR GCA 90 bp | GTATGGAAAGCTATCCCCGGCGGGCGCGCGGTGAGTTTGCTCGACCAGCTTAGGGAAACGACTGCGCCGTaGTGCCGCCCCCTGAACCCC | + |
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Preference number: 4 (lower is better) Translates to: VWKAIPGGRAVSLLDQLRETTAP*CRPLNP Trigger: GGGGTTCAGGGGGCGGCAGCACGGCGCAGTCGTTTC...CCTAAGCTGGTCGAGCAAACTCACCGCGCGCCCGCCGGGGATAGCTTTCCATAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR CCA 90 bp | TCGGTTTTACCTGTATGGAAAGCTATCCCCGGCGGGCGCGCGGTGAGTTTGCTCCCTCTGGCCCTGGCGTaGGGCGCAGGAGCGGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: SVLPVWKAIPGGRAVSLLPLALA*GAGAVQ Trigger: CTGGACCGCTCCTGCGCCCCACGCCAGGGCCAGAGG...GAGCAAACTCACCGCGCGCCCGCCGGGGATAGCTTTCCATACAGGTAAAACCGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR CCA 90 bp | GAAATTGGGGAGAGGCAGAGTCCAGGATTGGGCAGCGGGACCGGGACCGGGCTTCTCCGGCCGCCTCCTTaGGCAATGTCAGGGGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: EIGERQSPGLGSGTGTGLLRPPP*AMSGAA Trigger: AGCAGCCCCTGACATTGCCCAAGGAGGCGGCCGGAG...AAGCCCGGTCCCGGTCCCGCTGCCCAATCCTGGACTCTGCCTCTCCCCAATTTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR CCA 90 bp | AGGGCGCGCAGCCTGGAGGTGCATTTGTTGCTCGAGGCCGCCGCCGGACCCTGGAAACTGTCCGGAGAGTaGCACGCTAAGAATGGGCGC | + |
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Preference number: 4 (lower is better) Translates to: RARSLEVHLLLEAAAGPWKLSGE*HAKNGR Trigger: GCGCCCATTCTTAGCGTGCCACTCTCCGGACAGTTT...CCAGGGTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCAGGCTGCGCGCCCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR CCA 90 bp | GAAATTGGGGAGAGGCAGAGTCCAGGATTGGGCAGCGGGACCGGGACCGGGCTTATTGCGCCGGCCATTTaGCTTGAGCGGCGGCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: EIGERQSPGLGSGTGTGLIAPAI*LERRPQ Trigger: CTGCGGCCGCCGCTCAAGCCAAATGGCCGGCGCAAT...AAGCCCGGTCCCGGTCCCGCTGCCCAATCCTGGACTCTGCCTCTCCCCAATTTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR GCA 90 bp | GGGAAAGGAAATTGGGGAGAGGCAGAGTCCAGGATTGGGCAGCGGGACCGGGACAGGGTGTTCGGGGGCTaGCACGGAGCTCAGGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: GKGNWGEAESRIGQRDRDRVFGG*HGAQGK Trigger: CTTCCCCTGAGCTCCGTGGCAGCCCCCGAACACCCT...GTCCCGGTCCCGCTGCCCAATCCTGGACTCTGCCTCTCCCCAATTTCCTTTCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS-3UTR GCA 90 bp | TCGGTTTTACCTGTATGGAAAGCTATCCCCGGCGGGCGCGCGGTGAGTTTGCTCCTGTCCGTGATGGGGTaGCGCCGGGGGCACCTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: SVLPVWKAIPGGRAVSLLLSVMG*RRGHLV Trigger: GACGAGGTGCCCCCGGCGGCACCCCATCACGGACAG...GAGCAAACTCACCGCGCGCCCGCCGGGGATAGCTTTCCATACAGGTAAAACCGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS-3UTR GCA 90 bp | GAAATTGGGGAGAGGCAGAGTCCAGGATTGGGCAGCGGGACCGGGACCGGGCTTCTATTGAGCTGCAGCTaGAGGCCCGGGCCGAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EIGERQSPGLGSGTGTGLLLSCS*RPGPSC Trigger: ACAGCTCGGCCCGGGCCTGCAGCTGCAGCTCAATAG...AAGCCCGGTCCCGGTCCCGCTGCCCAATCCTGGACTCTGCCTCTCCCCAATTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS-3UTR CCA 90 bp | GAAATTGGGGAGAGGCAGAGTCCAGGATTGGGCAGCGGGACCGGGACCGGGCTTAACTCCTGCCGTCCCTaGCGCTCGGTACTAGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: EIGERQSPGLGSGTGTGLNSCRP*RSVLGA Trigger: AGCGCCTAGTACCGAGCGCCAGGGACGGCAGGAGTT...AAGCCCGGTCCCGGTCCCGCTGCCCAATCCTGGACTCTGCCTCTCCCCAATTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS-3UTR CCA 90 bp | GGGAAAGGAAATTGGGGAGAGGCAGAGTCCAGGATTGGGCAGCGGGACCGGGACCGACGGCCGCGCGCTTaGCTCGGACTTGATGAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: GKGNWGEAESRIGQRDRDRRPRA*LGLDER Trigger: TCGCTCATCAAGTCCGAGCCAAGCGCGCGGCCGTCG...GTCCCGGTCCCGCTGCCCAATCCTGGACTCTGCCTCTCCCCAATTTCCTTTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| 3UTR CAA 72 bp | GTATGGAAAGCTATCCCCGGCGGGCGCGCGGTGAGTTaGCTCGACCAGCTTAGGTGTGCGCGAGGGGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: VWKAIPGGRAVS*LDQLRCARGDG Trigger: TCCATCCCCTCGCGCACACCTAAGCTGGTCGAGCAAACTCACCGCGCGCCCGCCGGGGATAGCTTTCCATAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS-3UTR GCA 90 bp | GGGAAAGGAAATTGGGGAGAGGCAGAGTCCAGGATTGGGCAGCGGGACCGGGACTCGCGCAGGTGCTCCTaGTGGTGGCGCTTGAAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: GKGNWGEAESRIGQRDRDSRRCS*WWRLKR Trigger: ACGCTTCAAGCGCCACCAGCAGGAGCACCTGCGCGA...GTCCCGGTCCCGCTGCCCAATCCTGGACTCTGCCTCTCCCCAATTTCCTTTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS-3UTR GCA 90 bp | GTATGGAAAGCTATCCCCGGCGGGCGCGCGGTGAGTTTGCTCGACCAGCTTAGGATCATGAGCGCCGTCTaGTCGCGCAGGTGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VWKAIPGGRAVSLLDQLRIMSAV*SRRCSC Trigger: GCAGGAGCACCTGCGCGAGCAGACGGCGCTCATGAT...CCTAAGCTGGTCGAGCAAACTCACCGCGCGCCCGCCGGGGATAGCTTTCCATAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS-3UTR CCA 90 bp | TCGGTTTTACCTGTATGGAAAGCTATCCCCGGCGGGCGCGCGGTGAGTTTGCTCCTGGGTCCCGGCCATTaGCGCGTCCCTATTGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SVLPVWKAIPGGRAVSLLLGPGH*RVPIAP Trigger: CGGCGCAATAGGGACGCGCCAATGGCCGGGACCCAG...GAGCAAACTCACCGCGCGCCCGCCGGGGATAGCTTTCCATACAGGTAAAACCGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS-3UTR TCA 90 bp | GGGAAAGGAAATTGGGGAGAGGCAGAGTCCAGGATTGGGCAGCGGGACCGGGACCAGGGGAAGAGGGTTTaGGTGCCCCCGAAAGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: GKGNWGEAESRIGQRDRDQGKRV*VPPKDG Trigger: CCCATCTTTCGGGGGCACTCAAACCCTCTTCCCCTG...GTCCCGGTCCCGCTGCCCAATCCTGGACTCTGCCTCTCCCCAATTTCCTTTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS-3UTR CCA 90 bp | GTATGGAAAGCTATCCCCGGCGGGCGCGCGGTGAGTTTGCTCGACCAGCTTAGGCGCAGGTGCTCCTGCTaGTGGCGCTTGAAGCGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VWKAIPGGRAVSLLDQLRRRCSC*WRLKRF Trigger: GAAACGCTTCAAGCGCCACCAGCAGGAGCACCTGCG...CCTAAGCTGGTCGAGCAAACTCACCGCGCGCCCGCCGGGGATAGCTTTCCATAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS-3UTR CCA 90 bp | TCGGTTTTACCTGTATGGAAAGCTATCCCCGGCGGGCGCGCGGTGAGTTTGCTCGAATGGGCGCGATGGTaGCAGTCGTCCGGCTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SVLPVWKAIPGGRAVSLLEWARW*QSSGSA Trigger: CGCTGAGCCGGACGACTGCCACCATCGCGCCCATTC...GAGCAAACTCACCGCGCGCCCGCCGGGGATAGCTTTCCATACAGGTAAAACCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS-3UTR CCA 90 bp | GGGAAAGGAAATTGGGGAGAGGCAGAGTCCAGGATTGGGCAGCGGGACCGGGACACAGGGCGCGCAGCCTaGAGGTGCATTTGTTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GKGNWGEAESRIGQRDRDTGRAA*RCICCS Trigger: CGAGCAACAAATGCACCTCCAGGCTGCGCGCCCTGT...GTCCCGGTCCCGCTGCCCAATCCTGGACTCTGCCTCTCCCCAATTTCCTTTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS-3UTR CCA 90 bp | GAAATTGGGGAGAGGCAGAGTCCAGGATTGGGCAGCGGGACCGGGACCGGGCTTTCGGTTTTACCTGTATaGAAAGCTATCCCCGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: EIGERQSPGLGSGTGTGLSVLPV*KAIPGG Trigger: CCCGCCGGGGATAGCTTTCCATACAGGTAAAACCGA...AAGCCCGGTCCCGGTCCCGCTGCCCAATCCTGGACTCTGCCTCTCCCCAATTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS GCA 90 bp | GTACGGGTACTGGAGCGCCGCCGCAGCAGCCGCGGCCGCCGCCGCTaGCGGGTGCGAATAGGCACCGGCCGCCGCCGCAGGGTGCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VRVLERRRSSRGRRR*RVRIGTGRRRRVQA Trigger: GGCCTGCACCCTGCGGCGGCGGCCGGTGCCTATTCGCACCCGGCAGCGGCGGCGGCCGCGGCTGCTGCGGCGGCGCTCCAGTACCCGTAC 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS GCA 90 bp | GGCTCAGCTCACACTCGGCGGCCCCGCATCGCGTGGCGCGGGCTCTaGCGTCCGCCCCCAGCGGCCGCGCTCCGCGAACTCCTGCCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GSAHTRRPRIAWRGL*RPPPAAALRELLPS Trigger: GGACGGCAGGAGTTCGCGGAGCGCGGCCGCTGGGGGCGGACGGCAGAGCCCGCGCCACGCGATGCGGGGCCGCCGAGTGTGAGCTGAGCC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS GCA 90 bp | GCGGGCTCTGCCGTCCGCCCCCAGCGGCCGCGCTCCGCGAACTCCTaGCGTCCCTGGCGCTCGGTACTAGGCGCTCGCTACCGCTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: AGSAVRPQRPRSANS*RPWRSVLGARYRSR Trigger: CCGGGAGCGGTAGCGAGCGCCTAGTACCGAGCGCCAGGGACGGCAGGAGTTCGCGGAGCGCGGCCGCTGGGGGCGGACGGCAGAGCCCGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS-3UTR CAA 90 bp | AGGGCGCGCAGCCTGGAGGTGCATTTGTTGCTCGAGGCCGCCGCCGGACCCTGGCCGAAGGCGGCCGCTTaGCGGCCCAGCTCGCCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: RARSLEVHLLLEAAAGPWPKAAA*RPSSPE Trigger: CTCGGGCGAGCTGGGCCGCAAAGCGGCCGCCTTCGG...CCAGGGTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCAGGCTGCGCGCCCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS GCA 90 bp | CGTCCTCGGCCGTCAGCACCGTCTGGCCGGACATGTCGCTGGCGCTaGCGCCGCCGGAGAGGGTCATCCCTCCTCGGGGTTGGTAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: RPRPSAPSGRTCRWR*RRRRGSSLLGVGSG Trigger: GCCGCTACCAACCCCGAGGAGGGATGACCCTCTCCGGCGGCGGCAGCGCCAGCGACATGTCCGGCCAGACGGTGCTGACGGCCGAGGACG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS GCA 90 bp | CTCGTCCAGGCGCAGCTCCGGCGGCCCCGCGGGGCTATCGCAACCTaGGTCGCTGTCCTTCTCTTCCAGCCCGTCGTCGCCCTCGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LVQAQLRRPRGAIAT*VAVLLFQPVVALAH Trigger: GTGGGCGAGGGCGACGACGGGCTGGAAGAGAAGGACAGCGACGCAGGTTGCGATAGCCCCGCGGGGCCGCCGGAGCTGCGCCTGGACGAG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS-3UTR CAA 90 bp | GCAGCCTGGAGGTGCATTTGTTGCTCGAGGCCGCCGCCGGACCCTGGGTCCCGGCATCCCTCCTCGGGGTaGGTAGCGGCGGCGGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: AAWRCICCSRPPPDPGSRHPSSG*VAAAGR Trigger: CCTCCCCGCCGCCGCTACCAACCCCGAGGAGGGATG...CCGGGACCCAGGGTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCAGGCTGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS GCA 90 bp | CGGCTCAGCGACAGCGGTTGGTGGGTGGCCATGAGCGCTGCCGACTaGACGGTCCCGGGTGGCCGCAGAAACGACTGCGCCGTGCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RLSDSGWWVAMSAAD*TVPGGRRNDCAVLP Trigger: CGGCAGCACGGCGCAGTCGTTTCTGCGGCCACCCGGGACCGTGCAGTCGGCAGCGCTCATGGCCACCCACCAACCGCTGTCGCTGAGCCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS CCA 90 bp | ATGGGCGCGATGGTGGCAGTCGTCCGGCTCAGCGACAGCGGTTGGTaGGTGGCCATGAGCGCTGCCGACTGCACGGTCCCGGGTGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: MGAMVAVVRLSDSGW*VAMSAADCTVPGGR Trigger: GCGGCCACCCGGGACCGTGCAGTCGGCAGCGCTCATGGCCACCCACCAACCGCTGTCGCTGAGCCGGACGACTGCCACCATCGCGCCCAT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS CCA 90 bp | TGTCCACGTCCTCGGCCGTCAGCACCGTCTGGCCGGACATGTCGCTaGCGCTGCCGCCGCCGGAGAGGGTCATCCCTCCTCGGGGTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: CPRPRPSAPSGRTCR*RCRRRRGSSLLGVG Trigger: ACCAACCCCGAGGAGGGATGACCCTCTCCGGCGGCGGCAGCGCCAGCGACATGTCCGGCCAGACGGTGCTGACGGCCGAGGACGTGGACA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS-3UTR CAA 90 bp | GCAGCCTGGAGGTGCATTTGTTGCTCGAGGCCGCCGCCGGACCCTGGGTCCCGGAGGCTGTTCTTGGGCTaGCTCGGGGCCAGGCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: AAWRCICCSRPPPDPGSRRLFLG*LGARPP Trigger: GGGAGGCCTGGCCCCGAGCAAGCCCAAGAACAGCCT...CCGGGACCCAGGGTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCAGGCTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS-3UTR CAA 90 bp | AGGGCGCGCAGCCTGGAGGTGCATTTGTTGCTCGAGGCCGCCGCCGGACCCTGGTCCTGCTGGTGGCGCTaGAAGCGTTTCCGGCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RARSLEVHLLLEAAAGPWSCWWR*KRFRRR Trigger: GCGGCGCCGGAAACGCTTCAAGCGCCACCAGCAGGA...CCAGGGTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCAGGCTGCGCGCCCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS GCA 90 bp | AGTCGTCCGGCTCAGCGACAGCGGTTGGTGGGTGGCCATGAGCGCTaGCGACTGCACGGTCCCGGGTGGCCGCAGAAACGACTGCGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: SRPAQRQRLVGGHER*RLHGPGWPQKRLRR Trigger: ACGGCGCAGTCGTTTCTGCGGCCACCCGGGACCGTGCAGTCGGCAGCGCTCATGGCCACCCACCAACCGCTGTCGCTGAGCCGGACGACT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS CCA 90 bp | GCCCCCACCTATGATGTTCTCGATGCTGAACGACGGCCGCGCGCTTaGCTCGGACTTGATGAGCGACGCGGTGGTGCCCGCGGCGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: APTYDVLDAERRPRA*LGLDERRGGARGAR Trigger: GCGGGCGCCGCGGGCACCACCGCGTCGCTCATCAAGTCCGAGCCAAGCGCGCGGCCGTCGTTCAGCATCGAGAACATCATAGGTGGGGGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS CCA 90 bp | AGAATGGGCGCGATGGTGGCAGTCGTCCGGCTCAGCGACAGCGGTTaGTGGGTGGCCATGAGCGCTGCCGACTGCACGGTCCCGGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RMGAMVAVVRLSDSG*WVAMSAADCTVPGG Trigger: GCCACCCGGGACCGTGCAGTCGGCAGCGCTCATGGCCACCCACCAACCGCTGTCGCTGAGCCGGACGACTGCCACCATCGCGCCCATTCT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS CCA 90 bp | CGCAGCCTGGAGGTGCATTTGTTGCTCGAGGCCGCCGCCGGACCCTaGGTCCCGGCCATTGGCGCGTCCCTATTGCGCCGGCCATTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RSLEVHLLLEAAAGP*VPAIGASLLRRPFG Trigger: GCCAAATGGCCGGCGCAATAGGGACGCGCCAATGGCCGGGACCCAGGGTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCAGGCTGCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS-3UTR CAA 90 bp | GCAGCCTGGAGGTGCATTTGTTGCTCGAGGCCGCCGCCGGACCCTGGGTCCCGGGCGCTTGGCTCGGACTaGATGAGCGACGCGGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: AAWRCICCSRPPPDPGSRALGSD*MSDAVV Trigger: CACCACCGCGTCGCTCATCAAGTCCGAGCCAAGCGC...CCGGGACCCAGGGTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCAGGCTGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS-3UTR CAA 90 bp | CAGCCTGGAGGTGCATTTGTTGCTCGAGGCCGCCGCCGGACCCTGGGTCCCGGCCTGGAGGTGCATTTGTaGCTCGAGGCCGCCGCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: QPGGAFVARGRRRTLGPGLEVHL*LEAAAG Trigger: TCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCAG...GCCGGGACCCAGGGTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCAGGCTG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS TCA 90 bp | TGGTGGCAGTCGTCCGGCTCAGCGACAGCGGTTGGTGGGTGGCCATaGGCGCTGCCGACTGCACGGTCCCGGGTGGCCGCAGAAACGACT | + |
|
Preference number: 5 (lower is better) Translates to: WWQSSGSATAVGGWP*ALPTARSRVAAETT Trigger: AGTCGTTTCTGCGGCCACCCGGGACCGTGCAGTCGGCAGCGCTCATGGCCACCCACCAACCGCTGTCGCTGAGCCGGACGACTGCCACCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS CCA 90 bp | AGCGGCGGCGGCCGAGGCTGCGGGCTGCAGAAACTGTCCGGAGAGTaGCACGCTAAGAATGGGCGCGATGGTGGCAGTCGTCCGGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SGGGRGCGLQKLSGE*HAKNGRDGGSRPAQ Trigger: CTGAGCCGGACGACTGCCACCATCGCGCCCATTCTTAGCGTGCCACTCTCCGGACAGTTTCTGCAGCCCGCAGCCTCGGCCGCCGCCGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS-3UTR CAA 90 bp | GTATGGAAAGCTATCCCCGGCGGGCGCGCGGTGAGTTTGCTCGACCAGCTTAGGCCGCCAACACCGCCCTaGCAGCCGTCCGCCTCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: VWKAIPGGRAVSLLDQLRPPTPP*QPSASG Trigger: GCCGGAGGCGGACGGCTGCAAGGGCGGTGTTGGCGG...CCTAAGCTGGTCGAGCAAACTCACCGCGCGCCCGCCGGGGATAGCTTTCCATAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS-3UTR CAA 90 bp | GCAGCCTGGAGGTGCATTTGTTGCTCGAGGCCGCCGCCGGACCCTGGGTCCCGGTTCACTAGGCTGTTCTaGGGCTTGCTCGGGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AAWRCICCSRPPPDPGSRFTRLF*GLLGAR Trigger: CCTGGCCCCGAGCAAGCCCAAGAACAGCCTAGTGAA...CCGGGACCCAGGGTCCGGCGGCGGCCTCGAGCAACAAATGCACCTCCAGGCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS-3UTR CAA 90 bp | GTATGGAAAGCTATCCCCGGCGGGCGCGCGGTGAGTTTGCTCGACCAGCTTAGGCCTGGGTCCCGGCCATaGGCGCGTCCCTATTGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: VWKAIPGGRAVSLLDQLRPGSRP*ARPYCA Trigger: GGCGCAATAGGGACGCGCCAATGGCCGGGACCCAGG...CCTAAGCTGGTCGAGCAAACTCACCGCGCGCCCGCCGGGGATAGCTTTCCATAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS-3UTR CAA 90 bp | GAAATTGGGGAGAGGCAGAGTCCAGGATTGGGCAGCGGGACCGGGACCGGGCTTAGGCAGAGTCCAGGATaGGGCAGCGGGACCGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: EIGERQSPGLGSGTGTGLRQSPG*GSGTGT Trigger: GGTCCCGGTCCCGCTGCCCAATCCTGGACTCTGCCT...AAGCCCGGTCCCGGTCCCGCTGCCCAATCCTGGACTCTGCCTCTCCCCAATTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS-3UTR CAA 90 bp | GGGAAAGGAAATTGGGGAGAGGCAGAGTCCAGGATTGGGCAGCGGGACCGGGACAGCCTGGAGGTGCATTaGTTGCTCGAGGCCGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: GKGNWGEAESRIGQRDRDSLEVH*LLEAAA Trigger: GGCGGCGGCCTCGAGCAACAAATGCACCTCCAGGCT...GTCCCGGTCCCGCTGCCCAATCCTGGACTCTGCCTCTCCCCAATTTCCTTTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS-3UTR CAA 90 bp | GAAATTGGGGAGAGGCAGAGTCCAGGATTGGGCAGCGGGACCGGGACCGGGCTTATTGGCGCGTCCCTATaGCGCCGGCCATTTGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: EIGERQSPGLGSGTGTGLIGASL*RRPFGL Trigger: CAAGCCAAATGGCCGGCGCAATAGGGACGCGCCAAT...AAGCCCGGTCCCGGTCCCGCTGCCCAATCCTGGACTCTGCCTCTCCCCAATTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS-3UTR CAA 90 bp | GTATGGAAAGCTATCCCCGGCGGGCGCGCGGTGAGTTTGCTCGACCAGCTTAGGGGGCGCGCGGTGAGTTaGCTCGACCAGCTTAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: VWKAIPGGRAVSLLDQLRGRAVS*LDQLRC Trigger: ACACCTAAGCTGGTCGAGCAAACTCACCGCGCGCCC...CCTAAGCTGGTCGAGCAAACTCACCGCGCGCCCGCCGGGGATAGCTTTCCATAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS-3UTR CAA 90 bp | TCGGTTTTACCTGTATGGAAAGCTATCCCCGGCGGGCGCGCGGTGAGTTTGCTCTCAGGGGAAGAGGGTTaGAGTGCCCCCGAAAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: SVLPVWKAIPGGRAVSLLSGEEG*SAPERW Trigger: CCATCTTTCGGGGGCACTCAAACCCTCTTCCCCTGA...GAGCAAACTCACCGCGCGCCCGCCGGGGATAGCTTTCCATACAGGTAAAACCGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS CAA 90 bp | GAGGCCGCCGCCGGACCCTGGGTCCCGGCCATTGGCGCGTCCCTATaGCGCCGGCCATTTGGCTTGAGCGGCGGCCGCAGCAGCGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: EAAAGPWVPAIGASL*RRPFGLSGGRSSGG Trigger: GCCGCCGCTGCTGCGGCCGCCGCTCAAGCCAAATGGCCGGCGCAATAGGGACGCGCCAATGGCCGGGACCCAGGGTCCGGCGGCGGCCTC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS GCA 72 bp | GCCGTCCGCCCCCAGCGGCCGCGCTCCGCGAACTCCTaGCGTCCCTGGCGCTCGGTACTAGGCGCTCGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: AVRPQRPRSANS*RPWRSVLGARY Trigger: GTAGCGAGCGCCTAGTACCGAGCGCCAGGGACGGCAGGAGTTCGCGGAGCGCGGCCGCTGGGGGCGGACGGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS GCA 72 bp | GCACGGTCCCGGGTGGCCGCAGAAACGACTGCGCCGTaGTGCCGCCCCCTGAACCCCCAGTGCCGCCGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: ARSRVAAETTAP*CRPLNPQCRRR Trigger: TCGCCGGCGGCACTGGGGGTTCAGGGGGCGGCAGCACGGCGCAGTCGTTTCTGCGGCCACCCGGGACCGTGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS CCA 72 bp | GGTGGCCATGAGCGCTGCCGACTGCACGGTCCCGGGTaGCCGCAGAAACGACTGCGCCGTGCTGCCGCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GGHERCRLHGPG*PQKRLRRAAAP Trigger: GGGGGCGGCAGCACGGCGCAGTCGTTTCTGCGGCCACCCGGGACCGTGCAGTCGGCAGCGCTCATGGCCACC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS GCA 72 bp | GCGCAGCTCCGGCGGCCCCGCGGGGCTATCGCAACCTaGGTCGCTGTCCTTCTCTTCCAGCCCGTCGTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: AQLRRPRGAIAT*VAVLLFQPVVA Trigger: GGCGACGACGGGCTGGAAGAGAAGGACAGCGACGCAGGTTGCGATAGCCCCGCGGGGCCGCCGGAGCTGCGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371116.4 |
||
| CDS CCA 72 bp | CCTCGGCCGTCAGCACCGTCTGGCCGGACATGTCGCTaGCGCTGCCGCCGCCGGAGAGGGTCATCCCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: PRPSAPSGRTCR*RCRRRRGSSLL Trigger: GAGGAGGGATGACCCTCTCCGGCGGCGGCAGCGCCAGCGACATGTCCGGCCAGACGGTGCTGACGGCCGAGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS TCA 72 bp | TCGTCCGGCTCAGCGACAGCGGTTGGTGGGTGGCCATaGGCGCTGCCGACTGCACGGTCCCGGGTGGCCGCA | + |
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Preference number: 6 (lower is better) Translates to: SSGSATAVGGWP*ALPTARSRVAA Trigger: TGCGGCCACCCGGGACCGTGCAGTCGGCAGCGCTCATGGCCACCCACCAACCGCTGTCGCTGAGCCGGACGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS GCA 72 bp | CCGTCAGCACCGTCTGGCCGGACATGTCGCTGGCGCTaGCGCCGCCGGAGAGGGTCATCCCTCCTCGGGGTT | + |
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Preference number: 6 (lower is better) Translates to: PSAPSGRTCRWR*RRRRGSSLLGV Trigger: AACCCCGAGGAGGGATGACCCTCTCCGGCGGCGGCAGCGCCAGCGACATGTCCGGCCAGACGGTGCTGACGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS CAA 72 bp | TCGATGCTGAACGACGGCCGCGCGCTTGGCTCGGACTaGATGAGCGACGCGGTGGTGCCCGCGGCGCCCGCT | + |
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Preference number: 6 (lower is better) Translates to: SMLNDGRALGSD*MSDAVVPAAPA Trigger: AGCGGGCGCCGCGGGCACCACCGCGTCGCTCATCAAGTCCGAGCCAAGCGCGCGGCCGTCGTTCAGCATCGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS CAA 90 bp | ATGATGTTCTCGATGCTGAACGACGGCCGCGCGCTTGGCTCGGACTaGATGAGCGACGCGGTGGTGCCCGCGGCGCCCGCTGTGCCCGCA | + |
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Preference number: 6 (lower is better) Translates to: MMFSMLNDGRALGSD*MSDAVVPAAPAVPA Trigger: TGCGGGCACAGCGGGCGCCGCGGGCACCACCGCGTCGCTCATCAAGTCCGAGCCAAGCGCGCGGCCGTCGTTCAGCATCGAGAACATCAT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS CCA 72 bp | ATGGTGGCAGTCGTCCGGCTCAGCGACAGCGGTTGGTaGGTGGCCATGAGCGCTGCCGACTGCACGGTCCCG | + |
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Preference number: 6 (lower is better) Translates to: MVAVVRLSDSGW*VAMSAADCTVP Trigger: CGGGACCGTGCAGTCGGCAGCGCTCATGGCCACCCACCAACCGCTGTCGCTGAGCCGGACGACTGCCACCAT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS CCA 72 bp | GCGATGGTGGCAGTCGTCCGGCTCAGCGACAGCGGTTaGTGGGTGGCCATGAGCGCTGCCGACTGCACGGTC | + |
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Preference number: 6 (lower is better) Translates to: AMVAVVRLSDSG*WVAMSAADCTV Trigger: GACCGTGCAGTCGGCAGCGCTCATGGCCACCCACCAACCGCTGTCGCTGAGCCGGACGACTGCCACCATCGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS CCA 72 bp | GGCCGAGGCTGCGGGCTGCAGAAACTGTCCGGAGAGTaGCACGCTAAGAATGGGCGCGATGGTGGCAGTCGT | + |
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Preference number: 6 (lower is better) Translates to: GRGCGLQKLSGE*HAKNGRDGGSR Trigger: ACGACTGCCACCATCGCGCCCATTCTTAGCGTGCCACTCTCCGGACAGTTTCTGCAGCCCGCAGCCTCGGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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| CDS CCA 72 bp | TATGATGTTCTCGATGCTGAACGACGGCCGCGCGCTTaGCTCGGACTTGATGAGCGACGCGGTGGTGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: YDVLDAERRPRA*LGLDERRGGAR Trigger: GCGGGCACCACCGCGTCGCTCATCAAGTCCGAGCCAAGCGCGCGGCCGTCGTTCAGCATCGAGAACATCATA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371116.4 |
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