Pregenerated sensors for FOXD2 (Homo sapiens)
Ensembl gene IDs: ENSG00000186564Ensembl transcript IDs: ENST00000334793.6
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGCCTGTCGCCCTGAGCGATAGAGCCCGCTTAGTCCCAACTATCTaGGAGATTCTGTGCGTGGAGCCTGAAGTGCCGTGTCACGCGTGC | + |
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Preference number: 1 (lower is better) Translates to: GPVALSDRARLVPTI*EILCVEPEVPCHAC Trigger: GCACGCGTGACACGGCACTTCAGGCTCCACGCACAGAATCTCGCAGATAGTTGGGACTAAGCGGGCTCTATCGCTCAGGGCGACAGGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| 3UTR CCA 90 bp | AAAGGGAGACCCTCTGTTGGTGTTTCTGGCGGGATCCGTGGAGCCTaGCCAGGCATCTCTCCCGGAATGTGTTCCCCGAGAGGCGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: KGRPSVGVSGGIRGA*PGISPGMCSPRGAE Trigger: CTCTGCGCCTCTCGGGGAACACATTCCGGGAGAGATGCCTGGCCAGGCTCCACGGATCCCGCCAGAAACACCAACAGAGGGTCTCCCTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| 3UTR GCA 90 bp | CTGAGCGATAGAGCCCGCTTAGTCCCAACTATCTGCGAGATTCTGTaGGTGGAGCCTGAAGTGCCGTGTCACGCGTGCCGGCCCAAGGTC | + |
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Preference number: 1 (lower is better) Translates to: LSDRARLVPTICEIL*VEPEVPCHACRPKV Trigger: GACCTTGGGCCGGCACGCGTGACACGGCACTTCAGGCTCCACGCACAGAATCTCGCAGATAGTTGGGACTAAGCGGGCTCTATCGCTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| 3UTR CCA 90 bp | AAGGCAGAAAGGGAGACCCTCTGTTGGTGTTTCTGGCGGGATCCGTaGAGCCTGGCCAGGCATCTCTCCCGGAATGTGTTCCCCGAGAGG | + |
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Preference number: 1 (lower is better) Translates to: KAERETLCWCFWRDP*SLARHLSRNVFPER Trigger: CCTCTCGGGGAACACATTCCGGGAGAGATGCCTGGCCAGGCTCCACGGATCCCGCCAGAAACACCAACAGAGGGTCTCCCTTTCTGCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| 3UTR TCA 90 bp | AGCCCGCTTAGTCCCAACTATCTGCGAGATTCTGTGCGTGGAGCCTaGAGTGCCGTGTCACGCGTGCCGGCCCAAGGTCTGGAGACTTCA | + |
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Preference number: 1 (lower is better) Translates to: SPLSPNYLRDSVRGA*SAVSRVPAQGLETS Trigger: TGAAGTCTCCAGACCTTGGGCCGGCACGCGTGACACGGCACTTCAGGCTCCACGCACAGAATCTCGCAGATAGTTGGGACTAAGCGGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| 3UTR CCA 90 bp | GGCCCAAGGTCTGGAGACTTCATAAATAGACTCCCTGAGTTCCGCTaGGACCGCAGGAACTCCCGGGAGAGGCTGAGGAGTGCGGACCTA | + |
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Preference number: 1 (lower is better) Translates to: GPRSGDFINRLPEFR*DRRNSRERLRSADL Trigger: TAGGTCCGCACTCCTCAGCCTCTCCCGGGAGTTCCTGCGGTCCCAGCGGAACTCAGGGAGTCTATTTATGAAGTCTCCAGACCTTGGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| 3UTR CCA 90 bp | AGTGAGAGGGGAAAGGCAGAAAGGGAGACCCTCTGTTGGTGTTTCTaGCGGGATCCGTGGAGCCTGGCCAGGCATCTCTCCCGGAATGTG | + |
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Preference number: 1 (lower is better) Translates to: SERGKAERETLCWCF*RDPWSLARHLSRNV Trigger: CACATTCCGGGAGAGATGCCTGGCCAGGCTCCACGGATCCCGCCAGAAACACCAACAGAGGGTCTCCCTTTCTGCCTTTCCCCTCTCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| 3UTR CCA 90 bp | TCATTGCCTTTAGCCACAATAAATATCACAGGGCCTGGGACAGGGTaGAACACTGACAGGGTTGCTGGCCGGAGATGGCTGGACCCAGCC | + |
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Preference number: 1 (lower is better) Translates to: SLPLATINITGPGTG*NTDRVAGRRWLDPA Trigger: GGCTGGGTCCAGCCATCTCCGGCCAGCAACCCTGTCAGTGTTCCACCCTGTCCCAGGCCCTGTGATATTTATTGTGGCTAAAGGCAATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| 3UTR GCA 90 bp | AGTGGAGTGGGATCCAGGGTTTCTGCAGGGAATATAAAGACCCCCTaGTTCACCTCTCCGTTCAGCTCCGCCTGCGTAGACACTGGTTTA | + |
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Preference number: 1 (lower is better) Translates to: SGVGSRVSAGNIKTP*FTSPFSSACVDTGL Trigger: TAAACCAGTGTCTACGCAGGCGGAGCTGAACGGAGAGGTGAAGCAGGGGGTCTTTATATTCCCTGCAGAAACCCTGGATCCCACTCCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| 3UTR CCA 90 bp | GACCCCCTGCTTCACCTCTCCGTTCAGCTCCGCCTGCGTAGACACTaGTTTAGGCTTCAGAGGAAACGAACTTCCTTGGAGAACAGCAAA | + |
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Preference number: 1 (lower is better) Translates to: DPLLHLSVQLRLRRH*FRLQRKRTSLENSK Trigger: TTTGCTGTTCTCCAAGGAAGTTCGTTTCCTCTGAAGCCTAAACCAGTGTCTACGCAGGCGGAGCTGAACGGAGAGGTGAAGCAGGGGGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| 3UTR GCA 90 bp | GGGAATATAAAGACCCCCTGCTTCACCTCTCCGTTCAGCTCCGCCTaGGTAGACACTGGTTTAGGCTTCAGAGGAAACGAACTTCCTTGG | + |
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Preference number: 1 (lower is better) Translates to: GNIKTPCFTSPFSSA*VDTGLGFRGNELPW Trigger: CCAAGGAAGTTCGTTTCCTCTGAAGCCTAAACCAGTGTCTACGCAGGCGGAGCTGAACGGAGAGGTGAAGCAGGGGGTCTTTATATTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| 3UTR GCA 90 bp | AGACGATTTCACAGAGCTTCCCCACAGTGGAGAAGTTTAAATCAATaGACACCCAGTGGACAGAGAACGCCGAGAGCAGCGCGCTGTACA | + |
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Preference number: 1 (lower is better) Translates to: RRFHRASPQWRSLNQ*TPSGQRTPRAARCT Trigger: TGTACAGCGCGCTGCTCTCGGCGTTCTCTGTCCACTGGGTGTGCATTGATTTAAACTTCTCCACTGTGGGGAAGCTCTGTGAAATCGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| 3UTR CCA 90 bp | TCTTCCACACAGACCATCAGACGATTTCACAGAGCTTCCCCACAGTaGAGAAGTTTAAATCAATGCACACCCAGTGGACAGAGAACGCCG | + |
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Preference number: 1 (lower is better) Translates to: SSTQTIRRFHRASPQ*RSLNQCTPSGQRTP Trigger: CGGCGTTCTCTGTCCACTGGGTGTGCATTGATTTAAACTTCTCCACTGTGGGGAAGCTCTGTGAAATCGTCTGATGGTCTGTGTGGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| 3UTR-3UTR GCA 90 bp | ATTCTGTGCGTGGAGCCTGAAGTGCCGTGTCACGCGTGCCGGCCCAAGGTCTGGGGAGAGGCTGAGGAGTaGGGACCTAACCGGCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: ILCVEPEVPCHACRPKVWGEAEE*GPNRPW Trigger: CCAGGGCCGGTTAGGTCCGCACTCCTCAGCCTCTCC...CCAGACCTTGGGCCGGCACGCGTGACACGGCACTTCAGGCTCCACGCACAGAAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| 3UTR-3UTR CCA 90 bp | TGGAGCCTGGCCAGGCATCTCTCCCGGAATGTGTTCCCCGAGAGGCGCAGAGGCGCGAGATTCTGTGCGTaGAGCCTGAAGTGCCGTGTC | + |
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Preference number: 2 (lower is better) Translates to: WSLARHLSRNVFPERRRGARFCA*SLKCRV Trigger: GACACGGCACTTCAGGCTCCACGCACAGAATCTCGC...GCCTCTGCGCCTCTCGGGGAACACATTCCGGGAGAGATGCCTGGCCAGGCTCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| 3UTR-3UTR CCA 90 bp | GGACAGGGTGGAACACTGACAGGGTTGCTGGCCGGAGATGGCTGGACCCAGCCACTCTGTTGGTGTTTCTaGCGGGATCCGTGGAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: GQGGTLTGLLAGDGWTQPLCWCF*RDPWSL Trigger: CAGGCTCCACGGATCCCGCCAGAAACACCAACAGAG...TGGCTGGGTCCAGCCATCTCCGGCCAGCAACCCTGTCAGTGTTCCACCCTGTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| 3UTR-3UTR GCA 90 bp | TGGAGCCTGGCCAGGCATCTCTCCCGGAATGTGTTCCCCGAGAGGCGCAGAGGCTTAGTCCCAACTATCTaGGAGATTCTGTGCGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: WSLARHLSRNVFPERRRGLVPTI*EILCVE Trigger: CTCCACGCACAGAATCTCGCAGATAGTTGGGACTAA...GCCTCTGCGCCTCTCGGGGAACACATTCCGGGAGAGATGCCTGGCCAGGCTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| 3UTR-3UTR CCA 90 bp | TGGAGCCTGGCCAGGCATCTCTCCCGGAATGTGTTCCCCGAGAGGCGCAGAGGCAACTGTAAAGAATCTTaGCCTGCGACTTCTTCGCGT | + |
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Preference number: 2 (lower is better) Translates to: WSLARHLSRNVFPERRRGNCKES*PATSSR Trigger: ACGCGAAGAAGTCGCAGGCCAAGATTCTTTACAGTT...GCCTCTGCGCCTCTCGGGGAACACATTCCGGGAGAGATGCCTGGCCAGGCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| 3UTR-3UTR CCA 90 bp | GGACAGGGTGGAACACTGACAGGGTTGCTGGCCGGAGATGGCTGGACCCAGCCAAAGGATTTTCCTCAGTaGAGTGGGATCCAGGGTTTC | + |
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Preference number: 2 (lower is better) Translates to: GQGGTLTGLLAGDGWTQPKDFPQ*SGIQGF Trigger: GAAACCCTGGATCCCACTCCACTGAGGAAAATCCTT...TGGCTGGGTCCAGCCATCTCCGGCCAGCAACCCTGTCAGTGTTCCACCCTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| 3UTR-3UTR GCA 90 bp | GAGAGCAGCGCGCTGTACAGATATTTACACAAAATTATAGGACCCCCTGCCACAGTGCCGTGTCACGCGTaGCGGCCCAAGGTCTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: ESSALYRYLHKIIGPPATVPCHA*RPKVWR Trigger: TCTCCAGACCTTGGGCCGGCACGCGTGACACGGCAC...TGTGGCAGGGGGTCCTATAATTTTGTGTAAATATCTGTACAGCGCGCTGCTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| 3UTR-3UTR CCA 90 bp | GGTTTCTGCAGGGAATATAAAGACCCCCTGCTTCACCTCTCCGTTCAGCTCCGCGCAGGGTCTCAACGTTaGGGAAGAAGTGAGAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: GFCREYKDPLLHLSVQLRAGSQR*GRSERG Trigger: TCCCCTCTCACTTCTTCCCCAACGTTGAGACCCTGC...GCGGAGCTGAACGGAGAGGTGAAGCAGGGGGTCTTTATATTCCCTGCAGAAACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| 3UTR-3UTR CCA 90 bp | CAGTGGACAGAGAACGCCGAGAGCAGCGCGCTGTACAGATATTTACACAAAATTCTGGCCGGAGATGGCTaGACCCAGCCAGCCAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: QWTENAESSALYRYLHKILAGDG*TQPAKG Trigger: TCCCTTGGCTGGCTGGGTCCAGCCATCTCCGGCCAG...AATTTTGTGTAAATATCTGTACAGCGCGCTGCTCTCGGCGTTCTCTGTCCACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| 3UTR CCA 72 bp | CCCTCTGTTGGTGTTTCTGGCGGGATCCGTGGAGCCTaGCCAGGCATCTCTCCCGGAATGTGTTCCCCGAGA | + |
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Preference number: 3 (lower is better) Translates to: PSVGVSGGIRGA*PGISPGMCSPR Trigger: TCTCGGGGAACACATTCCGGGAGAGATGCCTGGCCAGGCTCCACGGATCCCGCCAGAAACACCAACAGAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| 3UTR TCA 72 bp | AGTCCCAACTATCTGCGAGATTCTGTGCGTGGAGCCTaGAGTGCCGTGTCACGCGTGCCGGCCCAAGGTCTG | + |
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Preference number: 3 (lower is better) Translates to: SPNYLRDSVRGA*SAVSRVPAQGL Trigger: CAGACCTTGGGCCGGCACGCGTGACACGGCACTTCAGGCTCCACGCACAGAATCTCGCAGATAGTTGGGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| 3UTR GCA 72 bp | CAACTATCTGCGAGATTCTGTGCGTGGAGCCTGAAGTaGCGTGTCACGCGTGCCGGCCCAAGGTCTGGAGAC | + |
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Preference number: 3 (lower is better) Translates to: QLSARFCAWSLK*RVTRAGPRSGD Trigger: GTCTCCAGACCTTGGGCCGGCACGCGTGACACGGCACTTCAGGCTCCACGCACAGAATCTCGCAGATAGTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| 3UTR GCA 72 bp | AGAGCCCGCTTAGTCCCAACTATCTGCGAGATTCTGTaGGTGGAGCCTGAAGTGCCGTGTCACGCGTGCCGG | + |
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Preference number: 3 (lower is better) Translates to: RARLVPTICEIL*VEPEVPCHACR Trigger: CCGGCACGCGTGACACGGCACTTCAGGCTCCACGCACAGAATCTCGCAGATAGTTGGGACTAAGCGGGCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| 3UTR CCA 72 bp | AGGGAGACCCTCTGTTGGTGTTTCTGGCGGGATCCGTaGAGCCTGGCCAGGCATCTCTCCCGGAATGTGTTC | + |
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Preference number: 3 (lower is better) Translates to: RETLCWCFWRDP*SLARHLSRNVF Trigger: GAACACATTCCGGGAGAGATGCCTGGCCAGGCTCCACGGATCCCGCCAGAAACACCAACAGAGGGTCTCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| 3UTR CCA 72 bp | GGAAAGGCAGAAAGGGAGACCCTCTGTTGGTGTTTCTaGCGGGATCCGTGGAGCCTGGCCAGGCATCTCTCC | + |
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Preference number: 3 (lower is better) Translates to: GKAERETLCWCF*RDPWSLARHLS Trigger: GGAGAGATGCCTGGCCAGGCTCCACGGATCCCGCCAGAAACACCAACAGAGGGTCTCCCTTTCTGCCTTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| 3UTR GCA 72 bp | GCCCTGAGCGATAGAGCCCGCTTAGTCCCAACTATCTaGGAGATTCTGTGCGTGGAGCCTGAAGTGCCGTGT | + |
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Preference number: 3 (lower is better) Translates to: ALSDRARLVPTI*EILCVEPEVPC Trigger: ACACGGCACTTCAGGCTCCACGCACAGAATCTCGCAGATAGTTGGGACTAAGCGGGCTCTATCGCTCAGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| 3UTR CCA 72 bp | TCTGGAGACTTCATAAATAGACTCCCTGAGTTCCGCTaGGACCGCAGGAACTCCCGGGAGAGGCTGAGGAGT | + |
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Preference number: 3 (lower is better) Translates to: SGDFINRLPEFR*DRRNSRERLRS Trigger: ACTCCTCAGCCTCTCCCGGGAGTTCCTGCGGTCCCAGCGGAACTCAGGGAGTCTATTTATGAAGTCTCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| 3UTR CCA 72 bp | TTAGCCACAATAAATATCACAGGGCCTGGGACAGGGTaGAACACTGACAGGGTTGCTGGCCGGAGATGGCTG | + |
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Preference number: 3 (lower is better) Translates to: LATINITGPGTG*NTDRVAGRRWL Trigger: CAGCCATCTCCGGCCAGCAACCCTGTCAGTGTTCCACCCTGTCCCAGGCCCTGTGATATTTATTGTGGCTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| 3UTR CCA 72 bp | CTTCACCTCTCCGTTCAGCTCCGCCTGCGTAGACACTaGTTTAGGCTTCAGAGGAAACGAACTTCCTTGGAG | + |
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Preference number: 3 (lower is better) Translates to: LHLSVQLRLRRH*FRLQRKRTSLE Trigger: CTCCAAGGAAGTTCGTTTCCTCTGAAGCCTAAACCAGTGTCTACGCAGGCGGAGCTGAACGGAGAGGTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| 3UTR GCA 72 bp | AAGGATTTTCCTCAGTGGAGTGGGATCCAGGGTTTCTaGAGGGAATATAAAGACCCCCTGCTTCACCTCTCC | + |
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Preference number: 3 (lower is better) Translates to: KDFPQWSGIQGF*REYKDPLLHLS Trigger: GGAGAGGTGAAGCAGGGGGTCTTTATATTCCCTGCAGAAACCCTGGATCCCACTCCACTGAGGAAAATCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| 3UTR CCA 72 bp | AGCACCCAAACACAAAAGAGAAAGGATTTTCCTCAGTaGAGTGGGATCCAGGGTTTCTGCAGGGAATATAAA | + |
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Preference number: 3 (lower is better) Translates to: STQTQKRKDFPQ*SGIQGFCREYK Trigger: TTTATATTCCCTGCAGAAACCCTGGATCCCACTCCACTGAGGAAAATCCTTTCTCTTTTGTGTTTGGGTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR GCA 90 bp | TCGCGTAGCCCCGGGCCTGTCGCCCTGAGCGATAGAGCCCGCTTAGTCCCAACTCGGGCTCGGCCGCGCTaGCTCTGGGGCGAGTGCGTT | + |
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Preference number: 4 (lower is better) Translates to: SRSPGPVALSDRARLVPTRARPR*LWGECV Trigger: AACGCACTCGCCCCAGAGGCAGCGCGGCCGAGCCCG...AGTTGGGACTAAGCGGGCTCTATCGCTCAGGGCGACAGGCCCGGGGCTACGCGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR TCA 90 bp | GTTCCGCTGGGACCGCAGGAACTCCCGGGAGAGGCTGAGGAGTGCGGACCTAACAGCAGCAGCTCCGGGTaGGGGTGCGGGTGTGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: VPLGPQELPGEAEECGPNSSSSG*GCGCGC Trigger: GCACCCACACCCGCACCCTCACCCGGAGCTGCTGCT...GTTAGGTCCGCACTCCTCAGCCTCTCCCGGGAGTTCCTGCGGTCCCAGCGGAAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR TCA 90 bp | GGATCCGTGGAGCCTGGCCAGGCATCTCTCCCGGAATGTGTTCCCCGAGAGGCGCGCCCGCGTCCGTCTTaGGGCCCTGGCGCAGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: GSVEPGQASLPECVPREARPRPS*GPGAEV Trigger: CACTTCTGCGCCAGGGCCTCAAGACGGACGCGGGCG...CGCCTCTCGGGGAACACATTCCGGGAGAGATGCCTGGCCAGGCTCCACGGATCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR GCA 90 bp | CTGGGACCGCAGGAACTCCCGGGAGAGGCTGAGGAGTGCGGACCTAACCGGCCCAGCGCGTCCCCGGGATaGGAGAGGCGAATGTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: LGPQELPGEAEECGPNRPSASPG*ERRMWP Trigger: TGGCCACATTCGCCTCTCGCATCCCGGGGACGCGCT...GGGCCGGTTAGGTCCGCACTCCTCAGCCTCTCCCGGGAGTTCCTGCGGTCCCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR CCA 90 bp | CTCTGTTGGTGTTTCTGGCGGGATCCGTGGAGCCTGGCCAGGCATCTCTCCCGGGGCGCAGAAGTGCGGTaGGCAGACCCGCCGCGGTGC | + |
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Preference number: 4 (lower is better) Translates to: LCWCFWRDPWSLARHLSRGAEVR*ADPPRC Trigger: GCACCGCGGCGGGTCTGCCCACCGCACTTCTGCGCC...CCGGGAGAGATGCCTGGCCAGGCTCCACGGATCCCGCCAGAAACACCAACAGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR GCA 90 bp | AATAGACTCCCTGAGTTCCGCTGGGACCGCAGGAACTCCCGGGAGAGGCTGAGGAGGAGCGGCGGCGGCTaGCGCGGCGAAAGCGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: NRLPEFRWDRRNSRERLRRSGGG*RGESEG Trigger: GCCTTCGCTTTCGCCGCGGCAGCCGCCGCCGCTCCT...CCTCAGCCTCTCCCGGGAGTTCCTGCGGTCCCAGCGGAACTCAGGGAGTCTATT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR GCA 90 bp | AATAGACTCCCTGAGTTCCGCTGGGACCGCAGGAACTCCCGGGAGAGGCTGAGGGCAGACCCGCCGCGGTaGCGGCTGCGGGAGGACTCA | + |
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Preference number: 4 (lower is better) Translates to: NRLPEFRWDRRNSRERLRADPPR*RLREDS Trigger: TGAGTCCTCCCGCAGCCGGCACCGCGGCGGGTCTGC...CCTCAGCCTCTCCCGGGAGTTCCTGCGGTCCCAGCGGAACTCAGGGAGTCTATT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR GCA 90 bp | TGGGACCGCAGGAACTCCCGGGAGAGGCTGAGGAGTGCGGACCTAACCGGCCCTCACCACGTCTATGTCTaGGTCGGCCTCGGACAGCGC | + |
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Preference number: 4 (lower is better) Translates to: WDRRNSRERLRSADLTGPHHVYV*VGLGQR Trigger: GCGCTGTCCGAGGCCGACGCAGACATAGACGTGGTG...AGGGCCGGTTAGGTCCGCACTCCTCAGCCTCTCCCGGGAGTTCCTGCGGTCCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR GCA 90 bp | CTGGGACAGGGTGGAACACTGACAGGGTTGCTGGCCGGAGATGGCTGGACCCAGGCGAAAGCGAAGGCGTaGGGGTGCGGGTGCGGATGC | + |
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Preference number: 4 (lower is better) Translates to: LGQGGTLTGLLAGDGWTQAKAKA*GCGCGC Trigger: GCATCCGCACCCGCACCCGCACGCCTTCGCTTTCGC...CTGGGTCCAGCCATCTCCGGCCAGCAACCCTGTCAGTGTTCCACCCTGTCCCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR GCA 90 bp | TGGAGCCTGGCCAGGCATCTCTCCCGGAATGTGTTCCCCGAGAGGCGCAGAGGCCACAGGGTGTGCCCTTaGCCACTCCACCCCCACCTC | + |
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Preference number: 4 (lower is better) Translates to: WSLARHLSRNVFPERRRGHRVCP*PLHPHL Trigger: GAGGTGGGGGTGGAGTGGGCAAGGGCACACCCTGTG...GCCTCTGCGCCTCTCGGGGAACACATTCCGGGAGAGATGCCTGGCCAGGCTCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR CCA 90 bp | GGATCCGTGGAGCCTGGCCAGGCATCTCTCCCGGAATGTGTTCCCCGAGAGGCGGGGATCCGTGGAGCCTaGCCAGGCATCTCTCCCGGA | + |
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Preference number: 4 (lower is better) Translates to: GSVEPGQASLPECVPREAGIRGA*PGISPG Trigger: TCCGGGAGAGATGCCTGGCCAGGCTCCACGGATCCC...CGCCTCTCGGGGAACACATTCCGGGAGAGATGCCTGGCCAGGCTCCACGGATCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR CCA 90 bp | TGGGACCGCAGGAACTCCCGGGAGAGGCTGAGGAGTGCGGACCTAACCGGCCCTTTCTGGCGGGATCCGTaGAGCCTGGCCAGGCATCTC | + |
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Preference number: 4 (lower is better) Translates to: WDRRNSRERLRSADLTGPFWRDP*SLARHL Trigger: GAGATGCCTGGCCAGGCTCCACGGATCCCGCCAGAA...AGGGCCGGTTAGGTCCGCACTCCTCAGCCTCTCCCGGGAGTTCCTGCGGTCCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR GCA 90 bp | GGACAGGGTGGAACACTGACAGGGTTGCTGGCCGGAGATGGCTGGACCCAGCCATCTCGCAGCAGCAGCTaGCCAGGGTCATGGTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: GQGGTLTGLLAGDGWTQPSRSSS*PGSWCR Trigger: GCGGCACCATGACCCTGGGCAGCTGCTGCTGCGAGA...TGGCTGGGTCCAGCCATCTCCGGCCAGCAACCCTGTCAGTGTTCCACCCTGTCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR GCA 90 bp | GGACAGGGTGGAACACTGACAGGGTTGCTGGCCGGAGATGGCTGGACCCAGCCAGTGCCGTGTCACGCGTaGCGGCCCAAGGTCTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: GQGGTLTGLLAGDGWTQPVPCHA*RPKVWR Trigger: TCTCCAGACCTTGGGCCGGCACGCGTGACACGGCAC...TGGCTGGGTCCAGCCATCTCCGGCCAGCAACCCTGTCAGTGTTCCACCCTGTCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR CCA 90 bp | GGACAGGGTGGAACACTGACAGGGTTGCTGGCCGGAGATGGCTGGACCCAGCCATCCGTCTTGAGGCCCTaGCGCAGAAGTGCGGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GQGGTLTGLLAGDGWTQPSVLRP*RRSAVG Trigger: GCCCACCGCACTTCTGCGCCAGGGCCTCAAGACGGA...TGGCTGGGTCCAGCCATCTCCGGCCAGCAACCCTGTCAGTGTTCCACCCTGTCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR CCA 90 bp | GGGAAAGGCAGAAAGGGAGACCCTCTGTTGGTGTTTCTGGCGGGATCCGTGGAGCGCGGCTGCCGCGAATaGCGGTCCCGGAGAGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GKGRKGDPLLVFLAGSVERGCRE*RSRRAL Trigger: GAGGGCTCTCCGGGACCGCCATTCGCGGCAGCCGCG...CTCCACGGATCCCGCCAGAAACACCAACAGAGGGTCTCCCTTTCTGCCTTTCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR CCA 90 bp | GTTCCGCTGGGACCGCAGGAACTCCCGGGAGAGGCTGAGGAGTGCGGACCTAACTGCTGCGGTCAGAAGTaGCAGCCACTAAGGCCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VPLGPQELPGEAEECGPNCCGQK*QPLRPA Trigger: CGCCGGCCTTAGTGGCTGCCACTTCTGACCGCAGCA...GTTAGGTCCGCACTCCTCAGCCTCTCCCGGGAGTTCCTGCGGTCCCAGCGGAAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR CCA 90 bp | ATTCTGTGCGTGGAGCCTGAAGTGCCGTGTCACGCGTGCCGGCCCAAGGTCTGGCTGGCCGGAGATGGCTaGACCCAGCCAGCCAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ILCVEPEVPCHACRPKVWLAGDG*TQPAKG Trigger: TCCCTTGGCTGGCTGGGTCCAGCCATCTCCGGCCAG...CCAGACCTTGGGCCGGCACGCGTGACACGGCACTTCAGGCTCCACGCACAGAAT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR GCA 90 bp | GCAGAAAGGGAGACCCTCTGTTGGTGTTTCTGGCGGGATCCGTGGAGCCTGGCCGGAGAGGCTGAGGAGTaGGGACCTAACCGGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AERETLCWCFWRDPWSLAGEAEE*GPNRPW Trigger: CCAGGGCCGGTTAGGTCCGCACTCCTCAGCCTCTCC...GGCCAGGCTCCACGGATCCCGCCAGAAACACCAACAGAGGGTCTCCCTTTCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR GCA 90 bp | GGTTTCTGCAGGGAATATAAAGACCCCCTGCTTCACCTCTCCGTTCAGCTCCGCGCCCTGGCGCAGAAGTaGGGTGGGCAGACCCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GFCREYKDPLLHLSVQLRALAQK*GGQTRR Trigger: GCGGCGGGTCTGCCCACCGCACTTCTGCGCCAGGGC...GCGGAGCTGAACGGAGAGGTGAAGCAGGGGGTCTTTATATTCCCTGCAGAAACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR GCA 90 bp | GGGAAAGGCAGAAAGGGAGACCCTCTGTTGGTGTTTCTGGCGGGATCCGTGGAGCCCTGCCACAGGGTGTaGCCTTGCCCACTCCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: GKGRKGDPLLVFLAGSVEPCHRV*PCPLHP Trigger: GGGGTGGAGTGGGCAAGGGCACACCCTGTGGCAGGG...CTCCACGGATCCCGCCAGAAACACCAACAGAGGGTCTCCCTTTCTGCCTTTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR CCA 90 bp | TCGCGTAGCCCCGGGCCTGTCGCCCTGAGCGATAGAGCCCGCTTAGTCCCAACTAGGGAGACCCTCTGTTaGTGTTTCTGGCGGGATCCG | + |
|
Preference number: 4 (lower is better) Translates to: SRSPGPVALSDRARLVPTRETLC*CFWRDP Trigger: CGGATCCCGCCAGAAACACCAACAGAGGGTCTCCCT...AGTTGGGACTAAGCGGGCTCTATCGCTCAGGGCGACAGGCCCGGGGCTACGCGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR CCA 90 bp | ATTCTGTGCGTGGAGCCTGAAGTGCCGTGTCACGCGTGCCGGCCCAAGGTCTGGGGGCCTGGGACAGGGTaGAACACTGACAGGGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ILCVEPEVPCHACRPKVWGPGTG*NTDRVA Trigger: AGCAACCCTGTCAGTGTTCCACCCTGTCCCAGGCCC...CCAGACCTTGGGCCGGCACGCGTGACACGGCACTTCAGGCTCCACGCACAGAAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR TCA 90 bp | GGTTTCTGCAGGGAATATAAAGACCCCCTGCTTCACCTCTCCGTTCAGCTCCGCGGCAAACCGGGACCCTaGGGACAGCAGCGCGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GFCREYKDPLLHLSVQLRGKPGP*GQQRVP Trigger: GGGGACGCGCTGCTGTCCTCAGGGTCCCGGTTTGCC...GCGGAGCTGAACGGAGAGGTGAAGCAGGGGGTCTTTATATTCCCTGCAGAAACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR GCA 90 bp | GGTTTCTGCAGGGAATATAAAGACCCCCTGCTTCACCTCTCCGTTCAGCTCCGCGGCGGCGGCAGGGGCTaGCGCTTGAAGCGCTTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: GFCREYKDPLLHLSVQLRGGGRG*RLKRLR Trigger: TCGCAAGCGCTTCAAGCGGCAGCCCCTGCCGCCGCC...GCGGAGCTGAACGGAGAGGTGAAGCAGGGGGTCTTTATATTCCCTGCAGAAACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR CCA 90 bp | CTCTGTTGGTGTTTCTGGCGGGATCCGTGGAGCCTGGCCAGGCATCTCTCCCGGCTCTGTTGGTGTTTCTaGCGGGATCCGTGGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LCWCFWRDPWSLARHLSRLCWCF*RDPWSL Trigger: CAGGCTCCACGGATCCCGCCAGAAACACCAACAGAG...CCGGGAGAGATGCCTGGCCAGGCTCCACGGATCCCGCCAGAAACACCAACAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR CCA 90 bp | GTTCCGCTGGGACCGCAGGAACTCCCGGGAGAGGCTGAGGAGTGCGGACCTAACTCAATGCACACCCAGTaGACAGAGAACGCCGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VPLGPQELPGEAEECGPNSMHTQ*TENAES Trigger: GCTCTCGGCGTTCTCTGTCCACTGGGTGTGCATTGA...GTTAGGTCCGCACTCCTCAGCCTCTCCCGGGAGTTCCTGCGGTCCCAGCGGAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR GCA 90 bp | CGTGCCGGCCCAAGGTCTGGAGACTTCATAAATAGACTCCCTGAGTTCCGCTGGAACCGGCCCTGGGCCTaGTGCGGTCAGAAGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RAGPRSGDFINRLPEFRWNRPWA*CGQKWQ Trigger: CTGCCACTTCTGACCGCAGCAGGCCCAGGGCCGGTT...CCAGCGGAACTCAGGGAGTCTATTTATGAAGTCTCCAGACCTTGGGCCGGCACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR GCA 90 bp | GGTTTCTGCAGGGAATATAAAGACCCCCTGCTTCACCTCTCCGTTCAGCTCCGCGCGTGGAGCCTGAAGTaGCGTGTCACGCGTGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GFCREYKDPLLHLSVQLRAWSLK*RVTRAG Trigger: GCCGGCACGCGTGACACGGCACTTCAGGCTCCACGC...GCGGAGCTGAACGGAGAGGTGAAGCAGGGGGTCTTTATATTCCCTGCAGAAACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR CCA 90 bp | GGTTTCTGCAGGGAATATAAAGACCCCCTGCTTCACCTCTCCGTTCAGCTCCGCCCGCGTAGAAGGCTTTaGCGCAGCCCAGCTCCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GFCREYKDPLLHLSVQLRPRRRL*RSPAPR Trigger: GCGCGGAGCTGGGCTGCGCCAAAGCCTTCTACGCGG...GCGGAGCTGAACGGAGAGGTGAAGCAGGGGGTCTTTATATTCCCTGCAGAAACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR CCA 90 bp | CGTGCCGGCCCAAGGTCTGGAGACTTCATAAATAGACTCCCTGAGTTCCGCTGGGGACCTAACCGGCCCTaGGCCTGCTGCGGTCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RAGPRSGDFINRLPEFRWGPNRP*ACCGQK Trigger: CTTCTGACCGCAGCAGGCCCAGGGCCGGTTAGGTCC...CCAGCGGAACTCAGGGAGTCTATTTATGAAGTCTCCAGACCTTGGGCCGGCACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR CCA 90 bp | TTCATAAATAGACTCCCTGAGTTCCGCTGGGACCGCAGGAACTCCCGGGAGAGGTGCGAGAGGCGAATGTaGCCAGCAACGGGAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FINRLPEFRWDRRNSRERCERRM*PATGAR Trigger: CCTGGCTCCCGTTGCTGGCCACATTCGCCTCTCGCA...CCTCTCCCGGGAGTTCCTGCGGTCCCAGCGGAACTCAGGGAGTCTATTTATGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR CCA 90 bp | GGTTTCTGCAGGGAATATAAAGACCCCCTGCTTCACCTCTCCGTTCAGCTCCGCCTCCCTGAGTTCCGCTaGGACCGCAGGAACTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GFCREYKDPLLHLSVQLRLPEFR*DRRNSR Trigger: CCGGGAGTTCCTGCGGTCCCAGCGGAACTCAGGGAG...GCGGAGCTGAACGGAGAGGTGAAGCAGGGGGTCTTTATATTCCCTGCAGAAACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR CCA 90 bp | GAGAGCAGCGCGCTGTACAGATATTTACACAAAATTATAGGACCCCCTGCCACATCCGCGGGAGGCTCGTaGCCGTGGGGGAGCACGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ESSALYRYLHKIIGPPATSAGGS*PWGSTS Trigger: GGACGTGCTCCCCCACGGCCACGAGCCTCCCGCGGA...TGTGGCAGGGGGTCCTATAATTTTGTGTAAATATCTGTACAGCGCGCTGCTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR GCA 90 bp | GGACAGGGTGGAACACTGACAGGGTTGCTGGCCGGAGATGGCTGGACCCAGCCAAATATAAAGACCCCCTaGTTCACCTCTCCGTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GQGGTLTGLLAGDGWTQPNIKTP*FTSPFS Trigger: GCTGAACGGAGAGGTGAAGCAGGGGGTCTTTATATT...TGGCTGGGTCCAGCCATCTCCGGCCAGCAACCCTGTCAGTGTTCCACCCTGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR CCA 90 bp | GCAGAAAGGGAGACCCTCTGTTGGTGTTTCTGGCGGGATCCGTGGAGCCTGGCCTTTTCCTCAGTGGAGTaGGATCCAGGGTTTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AERETLCWCFWRDPWSLAFSSVE*DPGFLQ Trigger: CTGCAGAAACCCTGGATCCCACTCCACTGAGGAAAA...GGCCAGGCTCCACGGATCCCGCCAGAAACACCAACAGAGGGTCTCCCTTTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR CCA 90 bp | CTGGGACAGGGTGGAACACTGACAGGGTTGCTGGCCGGAGATGGCTGGACCCAGAACTGTAAAGAATCTTaGCCTGCGACTTCTTCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LGQGGTLTGLLAGDGWTQNCKES*PATSSR Trigger: ACGCGAAGAAGTCGCAGGCCAAGATTCTTTACAGTT...CTGGGTCCAGCCATCTCCGGCCAGCAACCCTGTCAGTGTTCCACCCTGTCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR CCA 90 bp | TTCATAAATAGACTCCCTGAGTTCCGCTGGGACCGCAGGAACTCCCGGGAGAGGGCAGGGTCTCAACGTTaGGGAAGAAGTGAGAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FINRLPEFRWDRRNSRERAGSQR*GRSERG Trigger: TCCCCTCTCACTTCTTCCCCAACGTTGAGACCCTGC...CCTCTCCCGGGAGTTCCTGCGGTCCCAGCGGAACTCAGGGAGTCTATTTATGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR CCA 90 bp | CAGTGGACAGAGAACGCCGAGAGCAGCGCGCTGTACAGATATTTACACAAAATTAGCATGGCCAAGACCTaGGCTTGGCCCCCAGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: QWTENAESSALYRYLHKISMAKT*AWPPGP Trigger: GGGTCCTGGGGGCCAAGCCCAGGTCTTGGCCATGCT...AATTTTGTGTAAATATCTGTACAGCGCGCTGCTCTCGGCGTTCTCTGTCCACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR CCA 90 bp | CAGTGGACAGAGAACGCCGAGAGCAGCGCGCTGTACAGATATTTACACAAAATTGCCCCGCCGCCACCGTaGCCCATGATGTGGTCTATA | + |
|
Preference number: 4 (lower is better) Translates to: QWTENAESSALYRYLHKIAPPPP*PMMWSI Trigger: TATAGACCACATCATGGGCCACGGTGGCGGCGGGGC...AATTTTGTGTAAATATCTGTACAGCGCGCTGCTCTCGGCGTTCTCTGTCCACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR CCA 90 bp | TATTTCTCAAACTGTAAAGAATCTTGGCCTGCGACTTCTTCGCGTAGCCCCGGGCACCTCTCCAGTCCCTaGCCCAGACCCTTCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: YFSNCKESWPATSSRSPGHLSSP*PRPFSS Trigger: GGAAGAGAAGGGTCTGGGCCAGGGACTGGAGAGGTG...CCCGGGGCTACGCGAAGAAGTCGCAGGCCAAGATTCTTTACAGTTTGAGAAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR GCA 90 bp | GGTTTCTGCAGGGAATATAAAGACCCCCTGCTTCACCTCTCCGTTCAGCTCCGCGGGATCCAGGGTTTCTaGAGGGAATATAAAGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: GFCREYKDPLLHLSVQLRGIQGF*REYKDP Trigger: GGGGTCTTTATATTCCCTGCAGAAACCCTGGATCCC...GCGGAGCTGAACGGAGAGGTGAAGCAGGGGGTCTTTATATTCCCTGCAGAAACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR CCA 90 bp | GCTTTTATTTCTCAAACTGTAAAGAATCTTGGCCTGCGACTTCTTCGCGTAGCCGGCCGGCGACTTTGCTaGCAAACCGGGACCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AFISQTVKNLGLRLLRVAGRRLC*QTGTLR Trigger: CCTCAGGGTCCCGGTTTGCCAGCAAAGTCGCCGGCC...GGCTACGCGAAGAAGTCGCAGGCCAAGATTCTTTACAGTTTGAGAAATAAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR CCA 90 bp | TATTTCTCAAACTGTAAAGAATCTTGGCCTGCGACTTCTTCGCGTAGCCCCGGGGCGAGATTCTGTGCGTaGAGCCTGAAGTGCCGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: YFSNCKESWPATSSRSPGARFCA*SLKCRV Trigger: GACACGGCACTTCAGGCTCCACGCACAGAATCTCGC...CCCGGGGCTACGCGAAGAAGTCGCAGGCCAAGATTCTTTACAGTTTGAGAAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR TCA 90 bp | GCTTTTATTTCTCAAACTGTAAAGAATCTTGGCCTGCGACTTCTTCGCGTAGCCTCTGTGCGTGGAGCCTaGAGTGCCGTGTCACGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: AFISQTVKNLGLRLLRVASVRGA*SAVSRV Trigger: CACGCGTGACACGGCACTTCAGGCTCCACGCACAGA...GGCTACGCGAAGAAGTCGCAGGCCAAGATTCTTTACAGTTTGAGAAATAAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR CCA 90 bp | CAGTGGACAGAGAACGCCGAGAGCAGCGCGCTGTACAGATATTTACACAAAATTCCGTGGCCCATGATGTaGTCTATAGAGAAGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QWTENAESSALYRYLHKIPWPMM*SIEKEG Trigger: GCCTTCCTTCTCTATAGACCACATCATGGGCCACGG...AATTTTGTGTAAATATCTGTACAGCGCGCTGCTCTCGGCGTTCTCTGTCCACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR CCA 90 bp | ACGATTTCACAGAGCTTCCCCACAGTGGAGAAGTTTAAATCAATGCACACCCAGCGCCTGCGTAGACACTaGTTTAGGCTTCAGAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TISQSFPTVEKFKSMHTQRLRRH*FRLQRK Trigger: TTTCCTCTGAAGCCTAAACCAGTGTCTACGCAGGCG...CTGGGTGTGCATTGATTTAAACTTCTCCACTGTGGGGAAGCTCTGTGAAATCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR CCA 90 bp | GAGAGCAGCGCGCTGTACAGATATTTACACAAAATTATAGGACCCCCTGCCACATTCAATCGACACCAATaGGAAATAGGCGGCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: ESSALYRYLHKIIGPPATFNRHQ*EIGGRQ Trigger: CTGTCTGCCGCCTATTTCCCATTGGTGTCGATTGAA...TGTGGCAGGGGGTCCTATAATTTTGTGTAAATATCTGTACAGCGCGCTGCTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR GCA 90 bp | ACGATTTCACAGAGCTTCCCCACAGTGGAGAAGTTTAAATCAATGCACACCCAGTTAGTCCCAACTATCTaGGAGATTCTGTGCGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TISQSFPTVEKFKSMHTQLVPTI*EILCVE Trigger: CTCCACGCACAGAATCTCGCAGATAGTTGGGACTAA...CTGGGTGTGCATTGATTTAAACTTCTCCACTGTGGGGAAGCTCTGTGAAATCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR CCA 90 bp | AAGAGAAAGGATTTTCCTCAGTGGAGTGGGATCCAGGGTTTCTGCAGGGAATATAAGGATTTTCCTCAGTaGAGTGGGATCCAGGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KRKDFPQWSGIQGFCREYKDFPQ*SGIQGF Trigger: GAAACCCTGGATCCCACTCCACTGAGGAAAATCCTT...ATATTCCCTGCAGAAACCCTGGATCCCACTCCACTGAGGAAAATCCTTTCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS GCA 90 bp | GGCGCGGCCTGGGGGTACCGACAGCTGGCAAGGAGCGGCGGCGGCTaGCGCGGCGAAAGCGAAGGCGTGCGGGTGCGGGTGCGGATGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GAAWGYRQLARSGGG*RGESEGVRVRVRMR Trigger: CCGCATCCGCACCCGCACCCGCACGCCTTCGCTTTCGCCGCGGCAGCCGCCGCCGCTCCTTGCCAGCTGTCGGTACCCCCAGGCCGCGCC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS CCA 90 bp | CGCGGCCCCGCCACGCAGCAGCAGCTCCGGGTGAGGGTGCGGGTGTaGGTGCGGCGGCGGCAGGGGCTGCCGCTTGAAGCGCTTGCGACG | + |
|
Preference number: 5 (lower is better) Translates to: RGPATQQQLRVRVRV*VRRRQGLPLEALAT Trigger: CGTCGCAAGCGCTTCAAGCGGCAGCCCCTGCCGCCGCCGCACCCACACCCGCACCCTCACCCGGAGCTGCTGCTGCGTGGCGGGGCCGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS GCA 90 bp | GCCTGCACCACCGCCCGCGTCCGTCTTGAGGCCCTGGCGCAGAAGTaGGGTGGGCAGACCCGCCGCGGTGCCGGCTGCGGGAGGACTCAG | + |
|
Preference number: 5 (lower is better) Translates to: ACTTARVRLEALAQK*GGQTRRGAGCGRTQ Trigger: CTGAGTCCTCCCGCAGCCGGCACCGCGGCGGGTCTGCCCACCGCACTTCTGCGCCAGGGCCTCAAGACGGACGCGGGCGGTGGTGCAGGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS CCA 90 bp | CGGTGCCGGCTGCGGGAGGACTCAGGGACGCCGCGTAGAAGGCTTTaGCGCAGCCCAGCTCCGCGCCCAGGAAGGCGGGCAGGCCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RCRLREDSGTPRRRL*RSPAPRPGRRAGLR Trigger: CCGCAGGCCTGCCCGCCTTCCTGGGCGCGGAGCTGGGCTGCGCCAAAGCCTTCTACGCGGCGTCCCTGAGTCCTCCCGCAGCCGGCACCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS TCA 90 bp | CTGCGTCGGCCTCGGACAGCGCGGCCGGGGAGCTCTCGGAGGACATaGTCTCGCAGCAGCAGCTGCCCAGGGTCATGGTGCCGCTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LRRPRTARPGSSRRT*SRSSSCPGSWCRCR Trigger: GCGGCAGCGGCACCATGACCCTGGGCAGCTGCTGCTGCGAGATCATGTCCTCCGAGAGCTCCCCGGCCGCGCTGTCCGAGGCCGACGCAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS GCA 90 bp | TGCCGCGAATGGCGGTCCCGGAGAGCCCTCGCCGGCGCCCGGGGGTaGTGCCCCGCCGCCACCGTGGCCCATGATGTGGTCTATAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: CREWRSRRALAGARG*CPAATVAHDVVYRE Trigger: TTCTCTATAGACCACATCATGGGCCACGGTGGCGGCGGGGCAGCACCCCCGGGCGCCGGCGAGGGCTCTCCGGGACCGCCATTCGCGGCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS GCA 90 bp | TTGCTGGCAAACCGGGACCCTGAGGACAGCAGCGCGTCCCCGGGATaGGAGAGGCGAATGTGGCCAGCAACGGGAGCCAGGGCCGGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLANRDPEDSSASPG*ERRMWPATGARAGA Trigger: TGCTCCGGCCCTGGCTCCCGTTGCTGGCCACATTCGCCTCTCGCATCCCGGGGACGCGCTGCTGTCCTCAGGGTCCCGGTTTGCCAGCAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS CCA 90 bp | GACCCTGAGGACAGCAGCGCGTCCCCGGGATGCGAGAGGCGAATGTaGCCAGCAACGGGAGCCAGGGCCGGAGCAGTCAGCATGGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: DPEDSSASPGCERRM*PATGARAGAVSMAK Trigger: CTTGGCCATGCTGACTGCTCCGGCCCTGGCTCCCGTTGCTGGCCACATTCGCCTCTCGCATCCCGGGGACGCGCTGCTGTCCTCAGGGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS TCA 90 bp | GTGGCAGCCACTAAGGCCGGCGACTTTGCTGGCAAACCGGGACCCTaGGGACAGCAGCGCGTCCCCGGGATGCGAGAGGCGAATGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VAATKAGDFAGKPGP*GQQRVPGMREANVA Trigger: GGCCACATTCGCCTCTCGCATCCCGGGGACGCGCTGCTGTCCTCAGGGTCCCGGTTTGCCAGCAAAGTCGCCGGCCTTAGTGGCTGCCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS GCA 90 bp | CTCCCGGGAGAGGCTGAGGAGTGCGGACCTAACCGGCCCTGGGCCTaGTGCGGTCAGAAGTGGCAGCCACTAAGGCCGGCGACTTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: LPGEAEECGPNRPWA*CGQKWQPLRPATLL Trigger: CAGCAAAGTCGCCGGCCTTAGTGGCTGCCACTTCTGACCGCAGCAGGCCCAGGGCCGGTTAGGTCCGCACTCCTCAGCCTCTCCCGGGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS CCA 90 bp | CAGGAACTCCCGGGAGAGGCTGAGGAGTGCGGACCTAACCGGCCCTaGGCCTGCTGCGGTCAGAAGTGGCAGCCACTAAGGCCGGCGACT | + |
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Preference number: 5 (lower is better) Translates to: QELPGEAEECGPNRP*ACCGQKWQPLRPAT Trigger: AGTCGCCGGCCTTAGTGGCTGCCACTTCTGACCGCAGCAGGCCCAGGGCCGGTTAGGTCCGCACTCCTCAGCCTCTCCCGGGAGTTCCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR CAA 90 bp | TCGCGTAGCCCCGGGCCTGTCGCCCTGAGCGATAGAGCCCGCTTAGTCCCAACTCCACAGGGTGTGCCCTaGCCCACTCCACCCCCACCT | + |
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Preference number: 5 (lower is better) Translates to: SRSPGPVALSDRARLVPTPQGVP*PTPPPP Trigger: AGGTGGGGGTGGAGTGGGCAAGGGCACACCCTGTGG...AGTTGGGACTAAGCGGGCTCTATCGCTCAGGGCGACAGGCCCGGGGCTACGCGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS CCA 90 bp | GAGGAGTGCGGACCTAACCGGCCCTGGGCCTGCTGCGGTCAGAAGTaGCAGCCACTAAGGCCGGCGACTTTGCTGGCAAACCGGGACCCT | + |
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Preference number: 5 (lower is better) Translates to: EECGPNRPWACCGQK*QPLRPATLLANRDP Trigger: AGGGTCCCGGTTTGCCAGCAAAGTCGCCGGCCTTAGTGGCTGCCACTTCTGACCGCAGCAGGCCCAGGGCCGGTTAGGTCCGCACTCCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR CAA 90 bp | GCAGAAAGGGAGACCCTCTGTTGGTGTTTCTGGCGGGATCCGTGGAGCCTGGCCCCGCCCGCGTCCGTCTaGAGGCCCTGGCGCAGAAGT | + |
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Preference number: 5 (lower is better) Translates to: AERETLCWCFWRDPWSLAPPASV*RPWRRS Trigger: ACTTCTGCGCCAGGGCCTCAAGACGGACGCGGGCGG...GGCCAGGCTCCACGGATCCCGCCAGAAACACCAACAGAGGGTCTCCCTTTCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR CAA 90 bp | TGGAGCCTGGCCAGGCATCTCTCCCGGAATGTGTTCCCCGAGAGGCGCAGAGGCCTAAGGCCGGCGACTTaGCTGGCAAACCGGGACCCT | + |
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Preference number: 5 (lower is better) Translates to: WSLARHLSRNVFPERRRGLRPAT*LANRDP Trigger: AGGGTCCCGGTTTGCCAGCAAAGTCGCCGGCCTTAG...GCCTCTGCGCCTCTCGGGGAACACATTCCGGGAGAGATGCCTGGCCAGGCTCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR CAA 90 bp | ACCCAAACACAAAAGAGAAAGGATTTTCCTCAGTGGAGTGGGATCCAGGGTTTCGGCAGGGGCTGCCGCTaGAAGCGCTTGCGACGCCGC | + |
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Preference number: 5 (lower is better) Translates to: TQTQKRKDFPQWSGIQGFGRGCR*KRLRRR Trigger: GCGGCGTCGCAAGCGCTTCAAGCGGCAGCCCCTGCC...GAAACCCTGGATCCCACTCCACTGAGGAAAATCCTTTCTCTTTTGTGTTTGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR CAA 90 bp | CTGCGTAGACACTGGTTTAGGCTTCAGAGGAAACGAACTTCCTTGGAGAACAGCGGAACACTGACAGGGTaGCTGGCCGGAGATGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: LRRHWFRLQRKRTSLENSGTLTG*LAGDGW Trigger: CCAGCCATCTCCGGCCAGCAACCCTGTCAGTGTTCC...GCTGTTCTCCAAGGAAGTTCGTTTCCTCTGAAGCCTAAACCAGTGTCTACGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR CAA 90 bp | TATTTCTCAAACTGTAAAGAATCTTGGCCTGCGACTTCTTCGCGTAGCCCCGGGAAGGGAGACCCTCTGTaGGTGTTTCTGGCGGGATCC | + |
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Preference number: 5 (lower is better) Translates to: YFSNCKESWPATSSRSPGKGDPL*VFLAGS Trigger: GGATCCCGCCAGAAACACCAACAGAGGGTCTCCCTT...CCCGGGGCTACGCGAAGAAGTCGCAGGCCAAGATTCTTTACAGTTTGAGAAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS-3UTR CAA 90 bp | CTGCGTAGACACTGGTTTAGGCTTCAGAGGAAACGAACTTCCTTGGAGAACAGCTTCCACCCAATCTCATaGCCTTTAGCCACAATAAAT | + |
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Preference number: 5 (lower is better) Translates to: LRRHWFRLQRKRTSLENSFHPIS*PLATIN Trigger: ATTTATTGTGGCTAAAGGCAATGAGATTGGGTGGAA...GCTGTTCTCCAAGGAAGTTCGTTTCCTCTGAAGCCTAAACCAGTGTCTACGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS GCA 72 bp | ACCGCCCGCGTCCGTCTTGAGGCCCTGGCGCAGAAGTaGGGTGGGCAGACCCGCCGCGGTGCCGGCTGCGGG | + |
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Preference number: 6 (lower is better) Translates to: TARVRLEALAQK*GGQTRRGAGCG Trigger: CCCGCAGCCGGCACCGCGGCGGGTCTGCCCACCGCACTTCTGCGCCAGGGCCTCAAGACGGACGCGGGCGGT 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS CCA 72 bp | CCGCCTGCACCACCGCCCGCGTCCGTCTTGAGGCCCTaGCGCAGAAGTGCGGTGGGCAGACCCGCCGCGGTG | + |
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Preference number: 6 (lower is better) Translates to: PPAPPPASVLRP*RRSAVGRPAAV Trigger: CACCGCGGCGGGTCTGCCCACCGCACTTCTGCGCCAGGGCCTCAAGACGGACGCGGGCGGTGGTGCAGGCGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS GCA 72 bp | CCTGGCGCAGAAGTGCGGTGGGCAGACCCGCCGCGGTaGCGGCTGCGGGAGGACTCAGGGACGCCGCGTAGA | + |
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Preference number: 6 (lower is better) Translates to: PGAEVRWADPPR*RLREDSGTPRR Trigger: TCTACGCGGCGTCCCTGAGTCCTCCCGCAGCCGGCACCGCGGCGGGTCTGCCCACCGCACTTCTGCGCCAGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS CCA 72 bp | CTGCGGGAGGACTCAGGGACGCCGCGTAGAAGGCTTTaGCGCAGCCCAGCTCCGCGCCCAGGAAGGCGGGCA | + |
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Preference number: 6 (lower is better) Translates to: LREDSGTPRRRL*RSPAPRPGRRA Trigger: TGCCCGCCTTCCTGGGCGCGGAGCTGGGCTGCGCCAAAGCCTTCTACGCGGCGTCCCTGAGTCCTCCCGCAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS CCA 72 bp | GACAGCAGCGCGTCCCCGGGATGCGAGAGGCGAATGTaGCCAGCAACGGGAGCCAGGGCCGGAGCAGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: DSSASPGCERRM*PATGARAGAVS Trigger: GCTGACTGCTCCGGCCCTGGCTCCCGTTGCTGGCCACATTCGCCTCTCGCATCCCGGGGACGCGCTGCTGTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS TCA 72 bp | CCTCGGACAGCGCGGCCGGGGAGCTCTCGGAGGACATaGTCTCGCAGCAGCAGCTGCCCAGGGTCATGGTGC | + |
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Preference number: 6 (lower is better) Translates to: PRTARPGSSRRT*SRSSSCPGSWC Trigger: GCACCATGACCCTGGGCAGCTGCTGCTGCGAGATCATGTCCTCCGAGAGCTCCCCGGCCGCGCTGTCCGAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS GCA 72 bp | AACCGGGACCCTGAGGACAGCAGCGCGTCCCCGGGATaGGAGAGGCGAATGTGGCCAGCAACGGGAGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: NRDPEDSSASPG*ERRMWPATGAR Trigger: CCTGGCTCCCGTTGCTGGCCACATTCGCCTCTCGCATCCCGGGGACGCGCTGCTGTCCTCAGGGTCCCGGTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS GCA 72 bp | GAGGCTGAGGAGTGCGGACCTAACCGGCCCTGGGCCTaGTGCGGTCAGAAGTGGCAGCCACTAAGGCCGGCG | + |
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Preference number: 6 (lower is better) Translates to: EAEECGPNRPWA*CGQKWQPLRPA Trigger: CGCCGGCCTTAGTGGCTGCCACTTCTGACCGCAGCAGGCCCAGGGCCGGTTAGGTCCGCACTCCTCAGCCTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS CAA 90 bp | TGGGCCTGCTGCGGTCAGAAGTGGCAGCCACTAAGGCCGGCGACTTaGCTGGCAAACCGGGACCCTGAGGACAGCAGCGCGTCCCCGGGA | + |
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Preference number: 6 (lower is better) Translates to: WACCGQKWQPLRPAT*LANRDPEDSSASPG Trigger: TCCCGGGGACGCGCTGCTGTCCTCAGGGTCCCGGTTTGCCAGCAAAGTCGCCGGCCTTAGTGGCTGCCACTTCTGACCGCAGCAGGCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS CCA 72 bp | GGACCTAACCGGCCCTGGGCCTGCTGCGGTCAGAAGTaGCAGCCACTAAGGCCGGCGACTTTGCTGGCAAAC | + |
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Preference number: 6 (lower is better) Translates to: GPNRPWACCGQK*QPLRPATLLAN Trigger: GTTTGCCAGCAAAGTCGCCGGCCTTAGTGGCTGCCACTTCTGACCGCAGCAGGCCCAGGGCCGGTTAGGTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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| CDS CAA 72 bp | TGCGGTCAGAAGTGGCAGCCACTAAGGCCGGCGACTTaGCTGGCAAACCGGGACCCTGAGGACAGCAGCGCG | + |
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Preference number: 6 (lower is better) Translates to: CGQKWQPLRPAT*LANRDPEDSSA Trigger: CGCGCTGCTGTCCTCAGGGTCCCGGTTTGCCAGCAAAGTCGCCGGCCTTAGTGGCTGCCACTTCTGACCGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334793.6 |
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