Pregenerated sensors for FOXCUT (Homo sapiens)
Ensembl gene IDs: ENSG00000280916Ensembl transcript IDs: ENST00000628509.1, ENST00000652712.1
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGCACAGGGCACCGCGGCCCAGATTCCCCGCGGAGCGCCCGGCCCTaGCGGCCGCGGCGACAGTCTGGGGCGGTCCTGCTTCTCCTCAAG | + |
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Preference number: 5 (lower is better) Translates to: GTGHRGPDSPRSARP*RPRRQSGAVLLLLK Trigger: CTTGAGGAGAAGCAGGACCGCCCCAGACTGTCGCCGCGGCCGGCAGGGCCGGGCGCTCCGCGGGGAATCTGGGCCGCGGTGCCCTGTGCC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS GCA 90 bp | GGAGCGCCCGGCCCTGCCGGCCGCGGCGACAGTCTGGGGCGGTCCTaGTTCTCCTCAAGACCAGCCGATGGGTCGGGGCGCCTGGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: GAPGPAGRGDSLGRS*FSSRPADGSGRLVS Trigger: GGAGACCAGGCGCCCCGACCCATCGGCTGGTCTTGAGGAGAAGCAGGACCGCCCCAGACTGTCGCCGCGGCCGGCAGGGCCGGGCGCTCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS CCA 90 bp | TGCGGTCTTCCCTCGAAGAGCCGGGGAAGCCCAGTCCTGCCGGAGTaGGGCACAGGGCACCGCGGCCCAGATTCCCCGCGGAGCGCCCGG | + |
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Preference number: 5 (lower is better) Translates to: CGLPSKSRGSPVLPE*GTGHRGPDSPRSAR Trigger: CCGGGCGCTCCGCGGGGAATCTGGGCCGCGGTGCCCTGTGCCCCACTCCGGCAGGACTGGGCTTCCCCGGCTCTTCGAGGGAAGACCGCA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS CCA 90 bp | ACAAGCTTGGCTTGGGTCTGGACGATTGACCCAAAGGCCAACCCTTaGGGGAGAGAAGAGAACCCCGGACGCAGAGCCAGAGGAGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: TSLAWVWTIDPKANP*GREENPGRRARGGP Trigger: TGGGCCTCCTCTGGCTCTGCGTCCGGGGTTCTCTTCTCTCCCCCAAGGGTTGGCCTTTGGGTCAATCGTCCAGACCCAAGCCAAGCTTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS CCA 90 bp | CAGGCAACGTTAGTCATCGGTGCGACTTTTCAGCGGAGGAAGGAGTaGGGACCGAACATCTGGGTGGCCGCGACCTTGGGCAGATACTCC | + |
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Preference number: 5 (lower is better) Translates to: QATLVIGATFQRRKE*GPNIWVAATLGRYS Trigger: GGAGTATCTGCCCAAGGTCGCGGCCACCCAGATGTTCGGTCCCCACTCCTTCCTCCGCTGAAAAGTCGCACCGATGACTAACGTTGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS TCA 90 bp | AATTCCTCCCTTGCCCAACACAAGCTTGGCTTGGGTCTGGACGATTaGCCCAAAGGCCAACCCTTGGGGGAGAGAAGAGAACCCCGGACG | + |
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Preference number: 5 (lower is better) Translates to: NSSLAQHKLGLGLDD*PKGQPLGERREPRT Trigger: CGTCCGGGGTTCTCTTCTCTCCCCCAAGGGTTGGCCTTTGGGTCAATCGTCCAGACCCAAGCCAAGCTTGTGTTGGGCAAGGGAGGAATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS TCA 90 bp | TGCTACTCCACGGGGTACTTCAATCATCCGCTTCCGCACATCTCTTaGCTCATTTGGCAGAAGAGCCCCCACGGGAACCCTTCGGCTTCT | + |
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Preference number: 5 (lower is better) Translates to: CYSTGYFNHPLPHIS*LIWQKSPHGNPSAS Trigger: AGAAGCCGAAGGGTTCCCGTGGGGGCTCTTCTGCCAAATGAGTCAAGAGATGTGCGGAAGCGGATGATTGAAGTACCCCGTGGAGTAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS CCA 90 bp | TTTCCAGGAATTCCTCCCTTGCCCAACACAAGCTTGGCTTGGGTCTaGACGATTGACCCAAAGGCCAACCCTTGGGGGAGAGAAGAGAAC | + |
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Preference number: 5 (lower is better) Translates to: FPGIPPLPNTSLAWV*TIDPKANPWGREEN Trigger: GTTCTCTTCTCTCCCCCAAGGGTTGGCCTTTGGGTCAATCGTCCAGACCCAAGCCAAGCTTGTGTTGGGCAAGGGAGGAATTCCTGGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS GCA 90 bp | TTAGATTACTTAGATAATTGTCTTAGTTCTCCATTCGGCCTCCTTTaGTTAGACCAGAATCCCAGGGGTAGGGGAGGATATCCTTGCATC | + |
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Preference number: 5 (lower is better) Translates to: LDYLDNCLSSPFGLL*LDQNPRGRGGYPCI Trigger: GATGCAAGGATATCCTCCCCTACCCCTGGGATTCTGGTCTAAGCAAAGGAGGCCGAATGGAGAACTAAGACAATTATCTAAGTAATCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS GCA 72 bp | CACCGCGGCCCAGATTCCCCGCGGAGCGCCCGGCCCTaGCGGCCGCGGCGACAGTCTGGGGCGGTCCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: HRGPDSPRSARP*RPRRQSGAVLL Trigger: AAGCAGGACCGCCCCAGACTGTCGCCGCGGCCGGCAGGGCCGGGCGCTCCGCGGGGAATCTGGGCCGCGGTG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS GCA 72 bp | GGCCCTGCCGGCCGCGGCGACAGTCTGGGGCGGTCCTaGTTCTCCTCAAGACCAGCCGATGGGTCGGGGCGC | + |
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Preference number: 6 (lower is better) Translates to: GPAGRGDSLGRS*FSSRPADGSGR Trigger: GCGCCCCGACCCATCGGCTGGTCTTGAGGAGAAGCAGGACCGCCCCAGACTGTCGCCGCGGCCGGCAGGGCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS GCA 72 bp | GCGGTCTTCCCTCGAAGAGCCGGGGAAGCCCAGTCCTaGCGGAGTGGGGCACAGGGCACCGCGGCCCAGATT | + |
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Preference number: 6 (lower is better) Translates to: AVFPRRAGEAQS*RSGAQGTAAQI Trigger: AATCTGGGCCGCGGTGCCCTGTGCCCCACTCCGGCAGGACTGGGCTTCCCCGGCTCTTCGAGGGAAGACCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS GCA 72 bp | TCCGGCCCGCCACAGGGGTGCCCAGGGTCTTCTCTGTaGGGTCTTCCCTCGAAGAGCCGGGGAAGCCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: SGPPQGCPGSSL*GLPSKSRGSPV Trigger: GACTGGGCTTCCCCGGCTCTTCGAGGGAAGACCGCACAGAGAAGACCCTGGGCACCCCTGTGGCGGGCCGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS GCA 72 bp | GGCCCTACTTTCCCGGGGTCCGGCCCGCCACAGGGGTaGCCAGGGTCTTCTCTGTGCGGTCTTCCCTCGAAG | + |
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Preference number: 6 (lower is better) Translates to: GPTFPGSGPPQG*PGSSLCGLPSK Trigger: CTTCGAGGGAAGACCGCACAGAGAAGACCCTGGGCACCCCTGTGGCGGGCCGGACCCCGGGAAAGTAGGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS CCA 72 bp | TCGTTCCCGCCTCGGGATGGCCCACCTATCGCCCCTTaGCAGGAAAGCCCCCGCCTCGAAGGGCGTTTCGGG | + |
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Preference number: 6 (lower is better) Translates to: SFPPRDGPPIAP*QESPRLEGRFG Trigger: CCCGAAACGCCCTTCGAGGCGGGGGCTTTCCTGCCAAGGGGCGATAGGTGGGCCATCCCGAGGCGGGAACGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000628509.1 |
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| CDS CAA 72 bp | CCAGAGGAGGCCCAAGACCTCAGGCTCCGGAGGTGTTaGGCCACCAAGTGCGCGGGGCAGCAGGGGCCCTAC | + |
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Preference number: 6 (lower is better) Translates to: PEEAQDLRLRRC*ATKCAGQQGPY Trigger: GTAGGGCCCCTGCTGCCCCGCGCACTTGGTGGCCAAACACCTCCGGAGCCTGAGGTCTTGGGCCTCCTCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS GCA 72 bp | CAGGCCGGGCAACAATTCCCAGGGCCCACCGAGGGGTaGTTAGCTCGGAGGAGGGGGAGTGACGTCACAGCG | + |
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Preference number: 6 (lower is better) Translates to: QAGQQFPGPTEG*LARRRGSDVTA Trigger: CGCTGTGACGTCACTCCCCCTCCTCCGAGCTAAGCACCCCTCGGTGGGCCCTGGGAATTGTTGCCCGGCCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS CCA 72 bp | CAGAGGAGGCCCAAGACCTCAGGCTCCGGAGGTGTTTaGCCACCAAGTGCGCGGGGCAGCAGGGGCCCTACT | + |
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Preference number: 6 (lower is better) Translates to: QRRPKTSGSGGV*PPSARGSRGPT Trigger: AGTAGGGCCCCTGCTGCCCCGCGCACTTGGTGGCCAAACACCTCCGGAGCCTGAGGTCTTGGGCCTCCTCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS CCA 72 bp | CTGAAGGCCCCGCAGGCGACAGCGGTAATGGATGTTTaGTGGAACCCTCCCTGGGCCCACACTCCGCCCCTC | + |
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Preference number: 6 (lower is better) Translates to: LKAPQATAVMDV*WNPPWAHTPPL Trigger: GAGGGGCGGAGTGTGGGCCCAGGGAGGGTTCCACCAAACATCCATTACCGCTGTCGCCTGCGGGGCCTTCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS CAA 72 bp | CCTGAAGGCCCCGCAGGCGACAGCGGTAATGGATGTTaGGTGGAACCCTCCCTGGGCCCACACTCCGCCCCT | + |
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Preference number: 6 (lower is better) Translates to: PEGPAGDSGNGC*VEPSLGPHSAP Trigger: AGGGGCGGAGTGTGGGCCCAGGGAGGGTTCCACCAAACATCCATTACCGCTGTCGCCTGCGGGGCCTTCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS GCA 72 bp | GCTGGCCCAAGATGGGGAGGGCTTCTACCCAGGACTTaGAGTCTAGTGCGGCCTTCCCCCAGCAGATGCCCA | + |
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Preference number: 6 (lower is better) Translates to: AGPRWGGLLPRT*SLVRPSPSRCP Trigger: TGGGCATCTGCTGGGGGAAGGCCGCACTAGACTGCAAGTCCTGGGTAGAAGCCCTCCCCATCTTGGGCCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS CAA 72 bp | AGCTGGCCCAAGATGGGGAGGGCTTCTACCCAGGACTaGCAGTCTAGTGCGGCCTTCCCCCAGCAGATGCCC | + |
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Preference number: 6 (lower is better) Translates to: SWPKMGRASTQD*QSSAAFPQQMP Trigger: GGGCATCTGCTGGGGGAAGGCCGCACTAGACTGCAAGTCCTGGGTAGAAGCCCTCCCCATCTTGGGCCAGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS GCA 72 bp | AAGGCAGGCTTAGGGCATGAGGGAAGGCGCTTCTCCTaGTGCACTGGGGCAGTGATTCCTGGGGGCTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: KAGLGHEGRRFS*CTGAVIPGGSA Trigger: TGCAGAGCCCCCAGGAATCACTGCCCCAGTGCAGCAGGAGAAGCGCCTTCCCTCATGCCCTAAGCCTGCCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS GCA 72 bp | GGCTCTGGGTTCAGCCCTGAAAGCCGAACTGTGGGCTaGAGTGGGGAGGCGAGGGCAGGTAGAAACCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: GSGFSPESRTVG*SGEARAGRNQL Trigger: AAGCTGGTTTCTACCTGCCCTCGCCTCCCCACTGCAGCCCACAGTTCGGCTTTCAGGGCTGAACCCAGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS CCA 72 bp | GCTTGGGTCTGGACGATTGACCCAAAGGCCAACCCTTaGGGGAGAGAAGAGAACCCCGGACGCAGAGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: AWVWTIDPKANP*GREENPGRRAR Trigger: TCTGGCTCTGCGTCCGGGGTTCTCTTCTCTCCCCCAAGGGTTGGCCTTTGGGTCAATCGTCCAGACCCAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS CCA 72 bp | TTAGTCATCGGTGCGACTTTTCAGCGGAGGAAGGAGTaGGGACCGAACATCTGGGTGGCCGCGACCTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: LVIGATFQRRKE*GPNIWVAATLG Trigger: GCCCAAGGTCGCGGCCACCCAGATGTTCGGTCCCCACTCCTTCCTCCGCTGAAAAGTCGCACCGATGACTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS GCA 72 bp | CAAACCACCAGGCCGGCAGGCAACGTTAGTCATCGGTaGGACTTTTCAGCGGAGGAAGGAGTGGGGACCGAA | + |
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Preference number: 6 (lower is better) Translates to: QTTRPAGNVSHR*DFSAEEGVGTE Trigger: TTCGGTCCCCACTCCTTCCTCCGCTGAAAAGTCGCACCGATGACTAACGTTGCCTGCCGGCCTGGTGGTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS CAA 90 bp | GAATTCCTCCCTTGCCCAACACAAGCTTGGCTTGGGTCTGGACGATaGACCCAAAGGCCAACCCTTGGGGGAGAGAAGAGAACCCCGGAC | + |
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Preference number: 6 (lower is better) Translates to: EFLPCPTQAWLGSGR*TQRPTLGGEKRTPD Trigger: GTCCGGGGTTCTCTTCTCTCCCCCAAGGGTTGGCCTTTGGGTCAATCGTCCAGACCCAAGCCAAGCTTGTGTTGGGCAAGGGAGGAATTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS GCA 72 bp | AACCCCAGAGGGCCACTAGAAAACTGTCCACTAGGCTaGCATCACAGACCACTGGAGCAAGGTCCGCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: NPRGPLENCPLG*HHRPLEQGPLG Trigger: CCCAAGCGGACCTTGCTCCAGTGGTCTGTGATGGCAGCCTAGTGGACAGTTTTCTAGTGGCCCTCTGGGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS GCA 72 bp | GAACCCTTCGGCTTCTTTTCTGACACCTCACGTACTTaGAGCCTGAAGGCCCCGCAGGCGACAGCGGTAATG | + |
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Preference number: 6 (lower is better) Translates to: EPFGFFSDTSRT*SLKAPQATAVM Trigger: CATTACCGCTGTCGCCTGCGGGGCCTTCAGGCTGCAAGTACGTGAGGTGTCAGAAAAGAAGCCGAAGGGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS CCA 72 bp | ACTTTTCAGCGGAGGAAGGAGTGGGGACCGAACATCTaGGTGGCCGCGACCTTGGGCAGATACTCCTTAGCT | + |
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Preference number: 6 (lower is better) Translates to: TFQRRKEWGPNI*VAATLGRYSLA Trigger: AGCTAAGGAGTATCTGCCCAAGGTCGCGGCCACCCAGATGTTCGGTCCCCACTCCTTCCTCCGCTGAAAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS CAA 90 bp | CTGCTACTCCACGGGGTACTTCAATCATCCGCTTCCGCACATCTCTaGACTCATTTGGCAGAAGAGCCCCCACGGGAACCCTTCGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LLLHGVLQSSASAHL*THLAEEPPREPFGF Trigger: GAAGCCGAAGGGTTCCCGTGGGGGCTCTTCTGCCAAATGAGTCAAGAGATGTGCGGAAGCGGATGATTGAAGTACCCCGTGGAGTAGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS GCA 72 bp | CACCAGGAAGGGGAATGTGGCGAGCACTCCAGGAAATaGTCGGATTGGGGACCAGGTGACACTGTAGGAATG | + |
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Preference number: 6 (lower is better) Translates to: HQEGECGEHSRK*SDWGPGDTVGM Trigger: CATTCCTACAGTGTCACCTGGTCCCCAATCCGAGCATTTCCTGGAGTGCTCGCCACATTCCCCTTCCTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS CCA 72 bp | ATTCCTCCCTTGCCCAACACAAGCTTGGCTTGGGTCTaGACGATTGACCCAAAGGCCAACCCTTGGGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: IPPLPNTSLAWV*TIDPKANPWGR Trigger: TCTCCCCCAAGGGTTGGCCTTTGGGTCAATCGTCCAGACCCAAGCCAAGCTTGTGTTGGGCAAGGGAGGAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS CCA 72 bp | CCAGGAATTCCTCCCTTGCCCAACACAAGCTTGGCTTaGGTCTGGACGATTGACCCAAAGGCCAACCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: PGIPPLPNTSLA*VWTIDPKANPW Trigger: CCAAGGGTTGGCCTTTGGGTCAATCGTCCAGACCCAAGCCAAGCTTGTGTTGGGCAAGGGAGGAATTCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS CCA 72 bp | GGGGAATGTGGCGAGCACTCCAGGAAATGCTCGGATTaGGGACCAGGTGACACTGTAGGAATGTGTGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: GECGEHSRKCSD*GPGDTVGMCVL Trigger: CAGCACACACATTCCTACAGTGTCACCTGGTCCCCAATCCGAGCATTTCCTGGAGTGCTCGCCACATTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS CAA 72 bp | CCTTGCCCAACACAAGCTTGGCTTGGGTCTGGACGATaGACCCAAAGGCCAACCCTTGGGGGAGAGAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: PCPTQAWLGSGR*TQRPTLGGEKR Trigger: TCTCTTCTCTCCCCCAAGGGTTGGCCTTTGGGTCAATCGTCCAGACCCAAGCCAAGCTTGTGTTGGGCAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS CAA 72 bp | CACGGGGTACTTCAATCATCCGCTTCCGCACATCTCTaGACTCATTTGGCAGAAGAGCCCCCACGGGAACCC | + |
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Preference number: 6 (lower is better) Translates to: HGVLQSSASAHL*THLAEEPPREP Trigger: GGGTTCCCGTGGGGGCTCTTCTGCCAAATGAGTCAAGAGATGTGCGGAAGCGGATGATTGAAGTACCCCGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS TCA 72 bp | CTTGCCCAACACAAGCTTGGCTTGGGTCTGGACGATTaGCCCAAAGGCCAACCCTTGGGGGAGAGAAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: LAQHKLGLGLDD*PKGQPLGERRE Trigger: TTCTCTTCTCTCCCCCAAGGGTTGGCCTTTGGGTCAATCGTCCAGACCCAAGCCAAGCTTGTGTTGGGCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS GCA 72 bp | TCTGCACACACAGGAGGGAGGCTGCAAGTCCACAGCTaGTTTAGCATCTTTCCCTTTGCTGGGGCAGACAGA | + |
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Preference number: 6 (lower is better) Translates to: SAHTGGRLQVHS*FSIFPFAGADR Trigger: TCTGTCTGCCCCAGCAAAGGGAAAGATGCTAAAGCAGCTGTGGACTTGCAGCCTCCCTCCTGTGTGTGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS CAA 72 bp | CTTCAATCATCCGCTTCCGCACATCTCTTGACTCATTaGGCAGAAGAGCCCCCACGGGAACCCTTCGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LQSSASAHLLTH*AEEPPREPFGF Trigger: GAAGCCGAAGGGTTCCCGTGGGGGCTCTTCTGCCAAATGAGTCAAGAGATGTGCGGAAGCGGATGATTGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS CCA 72 bp | CTTTTCCAGGAATTCCTCCCTTGCCCAACACAAGCTTaGCTTGGGTCTGGACGATTGACCCAAAGGCCAACC | + |
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Preference number: 6 (lower is better) Translates to: LFQEFLPCPTQA*LGSGRLTQRPT Trigger: GGTTGGCCTTTGGGTCAATCGTCCAGACCCAAGCCAAGCTTGTGTTGGGCAAGGGAGGAATTCCTGGAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS CAA 90 bp | CAGGAGGGAGGCTGCAAGTCCACAGCTGCTTTAGCATCTTTCCCTTaGCTGGGGCAGACAGAGTGGAAGATTAAGGCAATTAACCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: QEGGCKSTAALASFP*LGQTEWKIKAINPR Trigger: TCTGGGGTTAATTGCCTTAATCTTCCACTCTGTCTGCCCCAGCAAAGGGAAAGATGCTAAAGCAGCTGTGGACTTGCAGCCTCCCTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS CCA 72 bp | GCTTTAGCATCTTTCCCTTTGCTGGGGCAGACAGAGTaGAAGATTAAGGCAATTAACCCCAGAGGGCCACTA | + |
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Preference number: 6 (lower is better) Translates to: ALASFPLLGQTE*KIKAINPRGPL Trigger: TAGTGGCCCTCTGGGGTTAATTGCCTTAATCTTCCACTCTGTCTGCCCCAGCAAAGGGAAAGATGCTAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS GCA 72 bp | TTAGATAATTGTCTTAGTTCTCCATTCGGCCTCCTTTaGTTAGACCAGAATCCCAGGGGTAGGGGAGGATAT | + |
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Preference number: 6 (lower is better) Translates to: LDNCLSSPFGLL*LDQNPRGRGGY Trigger: ATATCCTCCCCTACCCCTGGGATTCTGGTCTAAGCAAAGGAGGCCGAATGGAGAACTAAGACAATTATCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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| CDS CAA 90 bp | GCTGCCATCACAGACCACTGGAGCAAGGTCCGCTTGGGGATGTCTTaGAGCTTTTTAGATTACTTAGATAATTGTCTTAGTTCTCCATTC | + |
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Preference number: 6 (lower is better) Translates to: AAITDHWSKVRLGMS*SFLDYLDNCLSSPF Trigger: GAATGGAGAACTAAGACAATTATCTAAGTAATCTAAAAAGCTCAAAGACATCCCCAAGCGGACCTTGCTCCAGTGGTCTGTGATGGCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652712.1 |
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