Pregenerated sensors for FOXC2 (Homo sapiens)
Ensembl gene IDs: ENSG00000176692Ensembl transcript IDs: ENST00000649859.1
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGTTTCCTGGGATCCCAGAAACGGGGCGGCGAATTAAAGTTACCTaGGCTCTTCACAGACGGCTGGGGGCTAGCGTGCCCGCTCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: GFPGIPETGRRIKVT*ALHRRLGASVPALC Trigger: GCAGAGAGCGGGCACGCTAGCCCCCAGCCGTCTGTGAAGAGCGCAGGTAACTTTAATTCGCCGCCCCGTTTCTGGGATCCCAGGAAACCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| 3UTR-3UTR TCA 90 bp | TTGGGCTGCGTCCCTTTGGAGGGGTTTCCTGGGATCCCAGAAACGGGGCGGCGACTCTGCTCCCGGGTCTaGGAAAAGGTTGGTGGACAT | + |
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Preference number: 2 (lower is better) Translates to: LGCVPLEGFPGIPETGRRLCSRV*EKVGGH Trigger: ATGTCCACCAACCTTTTCTCAGACCCGGGAGCAGAG...TCGCCGCCCCGTTTCTGGGATCCCAGGAAACCCCTCCAAAGGGACGCAGCCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| 3UTR-3UTR CCA 90 bp | CAATACTCATTTTGTTGGGCTGCGTCCCTTTGGAGGGGTTTCCTGGGATCCCAGCTCTTCACAGACGGCTaGGGGCTAGCGTGCCCGCTC | + |
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Preference number: 2 (lower is better) Translates to: QYSFCWAASLWRGFLGSQLFTDG*GLACPL Trigger: GAGCGGGCACGCTAGCCCCCAGCCGTCTGTGAAGAG...CTGGGATCCCAGGAAACCCCTCCAAAGGGACGCAGCCCAACAAAATGAGTATTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| 3UTR-3UTR CCA 90 bp | ACAAATCCACACATTTGTACAGCACGGTTGGAGAAATTTAAAATTACACACAGCTTTGGAGGGGTTTCCTaGGATCCCAGAAACGGGGCG | + |
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Preference number: 2 (lower is better) Translates to: TNPHICTARLEKFKITHSFGGVS*DPRNGA Trigger: CGCCCCGTTTCTGGGATCCCAGGAAACCCCTCCAAA...GCTGTGTGTAATTTTAAATTTCTCCAACCGTGCTGTACAAATGTGTGGATTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| 3UTR-3UTR CCA 90 bp | ACAGGAAACAAAACCCACATCGGTTTCTTGAATTCAATTTGGCAGTTAGAAATGAGCCCCTTAATTGTCTaGTTGGGTCGGGGCTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: TGNKTHIGFLNSIWQLEMSPLIV*LGRGWE Trigger: TTCCCAGCCCCGACCCAACCAGACAATTAAGGGGCT...CATTTCTAACTGCCAAATTGAATTCAAGAAACCGATGTGGGTTTTGTTTCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| 3UTR-3UTR GCA 90 bp | TTGTACAGGAAACAAAACCCACATCGGTTTCTTGAATTCAATTTGGCAGTTAGACGAATTAAAGTTACCTaGGCTCTTCACAGACGGCTG | + |
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Preference number: 2 (lower is better) Translates to: LYRKQNPHRFLEFNLAVRRIKVT*ALHRRL Trigger: CAGCCGTCTGTGAAGAGCGCAGGTAACTTTAATTCG...TCTAACTGCCAAATTGAATTCAAGAAACCGATGTGGGTTTTGTTTCCTGTACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| 3UTR-3UTR CAA 90 bp | GGGCTGCGTCCCTTTGGAGGGGTTTCCTGGGATCCCAGAAACGGGGCGGCGAATCCCTTAATTGTCTGGTaGGGTCGGGGCTGGGAAGCG | + |
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Preference number: 3 (lower is better) Translates to: GLRPFGGVSWDPRNGAANPLIVW*GRGWEA Trigger: CGCTTCCCAGCCCCGACCCAACCAGACAATTAAGGG...ATTCGCCGCCCCGTTTCTGGGATCCCAGGAAACCCCTCCAAAGGGACGCAGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| 3UTR GCA 72 bp | TTACCTGCGCTCTTCACAGACGGCTGGGGGCTAGCGTaGCCGCTCTCTGCTCCCGGGTCTGAGAAAAGGTTG | + |
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Preference number: 3 (lower is better) Translates to: LPALFTDGWGLA*PLSAPGSEKRL Trigger: CAACCTTTTCTCAGACCCGGGAGCAGAGAGCGGGCACGCTAGCCCCCAGCCGTCTGTGAAGAGCGCAGGTAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| 3UTR CCA 72 bp | GGCGAATTAAAGTTACCTGCGCTCTTCACAGACGGCTaGGGGCTAGCGTGCCCGCTCTCTGCTCCCGGGTCT | + |
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Preference number: 3 (lower is better) Translates to: GELKLPALFTDG*GLACPLSAPGS Trigger: AGACCCGGGAGCAGAGAGCGGGCACGCTAGCCCCCAGCCGTCTGTGAAGAGCGCAGGTAACTTTAATTCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| 3UTR-3UTR CAA 90 bp | AATGGCTCTGAACAACAACAACAACAACAAAATAGCCTGATTACAAATCCACACTCAATACTCATTTTGTaGGGCTGCGTCCCTTTGGAG | + |
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Preference number: 3 (lower is better) Translates to: NGSEQQQQQQNSLITNPHSILIL*GCVPLE Trigger: CTCCAAAGGGACGCAGCCCAACAAAATGAGTATTGA...GTGTGGATTTGTAATCAGGCTATTTTGTTGTTGTTGTTGTTGTTCAGAGCCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| 3UTR-3UTR CAA 90 bp | ACAAATCCACACATTTGTACAGCACGGTTGGAGAAATTTAAAATTACACACAGCAGATCAATACTCATTTaGTTGGGCTGCGTCCCTTTG | + |
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Preference number: 3 (lower is better) Translates to: TNPHICTARLEKFKITHSRSILI*LGCVPL Trigger: CAAAGGGACGCAGCCCAACAAAATGAGTATTGATCT...GCTGTGTGTAATTTTAAATTTCTCCAACCGTGCTGTACAAATGTGTGGATTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| 3UTR TCA 72 bp | ATGGCTCTGAACAACAACAACAACAACAAAATAGCCTaGTTACAAATCCACACATTTGTACAGCACGGTTGG | + |
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Preference number: 3 (lower is better) Translates to: MALNNNNNNKIA*LQIHTFVQHGW Trigger: CCAACCGTGCTGTACAAATGTGTGGATTTGTAATCAGGCTATTTTGTTGTTGTTGTTGTTGTTCAGAGCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR GCA 90 bp | CTCTTCACAGACGGCTGGGGGCTAGCGTGCCCGCTCTCTGCTCCCGGGTCTGAGCCATGGGGCTGGCCATaGCGCCGTAGCTGCCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: LFTDGWGLACPLSAPGSEPWGWP*RRSCPQ Trigger: CTGCGGGCAGCTACGGCGGCATGGCCAGCCCCATGG...CTCAGACCCGGGAGCAGAGAGCGGGCACGCTAGCCCCCAGCCGTCTGTGAAGAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR GCA 90 bp | TTACCTGCGCTCTTCACAGACGGCTGGGGGCTAGCGTGCCCGCTCTCTGCTCCCGGCTGGGGGCTAGCGTaGCCGCTCTCTGCTCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: LPALFTDGWGLACPLSAPGWGLA*PLSAPG Trigger: CCCGGGAGCAGAGAGCGGGCACGCTAGCCCCCAGCC...GGGAGCAGAGAGCGGGCACGCTAGCCCCCAGCCGTCTGTGAAGAGCGCAGGTAA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CCA 90 bp | GGGCTGCGTCCCTTTGGAGGGGTTTCCTGGGATCCCAGAAACGGGGCGGCGAATGGCGGATCGGCATCCTaGAGGGCGCGCCCCGGGCAA | + |
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Preference number: 4 (lower is better) Translates to: GLRPFGGVSWDPRNGAANGGSAS*RARPGQ Trigger: TTGCCCGGGGCGCGCCCTCCAGGATGCCGATCCGCC...ATTCGCCGCCCCGTTTCTGGGATCCCAGGAAACCCCTCCAAAGGGACGCAGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CCA 90 bp | CCCTTAATTGTCTGGTTGGGTCGGGGCTGGGAAGCGAAGCCGGAGCGGGCCGGGTGGGCCGCGAACGTGTaGCCGGGGAGGTGGTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: PLIVWLGRGWEAKPERAGWAANV*PGRWFR Trigger: CCTGAACCACCTCCCCGGCCACACGTTCGCGGCCCA...CCCGGCCCGCTCCGGCTTCGCTTCCCAGCCCCGACCCAACCAGACAATTAAGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR GCA 90 bp | CTCTTCACAGACGGCTGGGGGCTAGCGTGCCCGCTCTCTGCTCCCGGGTCTGAGTCATCGCTCGCATGCTaGACTGGTAGCCCCCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: LFTDGWGLACPLSAPGSESSLAC*TGSPRR Trigger: CCGCCGGGGGCTACCAGTGCAGCATGCGAGCGATGA...CTCAGACCCGGGAGCAGAGAGCGGGCACGCTAGCCCCCAGCCGTCTGTGAAGAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CCA 90 bp | CCCTTAATTGTCTGGTTGGGTCGGGGCTGGGAAGCGAAGCCGGAGCGGGCCGGGCGGAATAGACGCCCATaGGGCTGGCCATGCCGCCGT | + |
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Preference number: 4 (lower is better) Translates to: PLIVWLGRGWEAKPERAGRNRRP*GWPCRR Trigger: ACGGCGGCATGGCCAGCCCCATGGGCGTCTATTCCG...CCCGGCCCGCTCCGGCTTCGCTTCCCAGCCCCGACCCAACCAGACAATTAAGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CCA 90 bp | CCCTTAATTGTCTGGTTGGGTCGGGGCTGGGAAGCGAAGCCGGAGCGGGCCGGGTCTTCTCGGCCTCCTTaGGGGCGTCCGCTAGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: PLIVWLGRGWEAKPERAGSSRPP*GRPLGG Trigger: CCCACCTAGCGGACGCCCCCAAGGAGGCCGAGAAGA...CCCGGCCCGCTCCGGCTTCGCTTCCCAGCCCCGACCCAACCAGACAATTAAGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CCA 90 bp | GCGTCTCTGCAGCCCCTTAATTGTCTGGTTGGGTCGGGGCTGGGAAGCGAAGCCGTGGGGCCGCTCGGGTaGTCCGAGAGGGCCTCGTCC | + |
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Preference number: 4 (lower is better) Translates to: ASLQPLNCLVGSGLGSEAVGPLG*SERASS Trigger: GGACGAGGCCCTCTCGGACCACCCGAGCGGCCCCAC...GGCTTCGCTTCCCAGCCCCGACCCAACCAGACAATTAAGGGGCTGCAGAGACGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR TCA 90 bp | TTACCTGCGCTCTTCACAGACGGCTGGGGGCTAGCGTGCCCGCTCTCTGCTCCCGGTCCCCGCTGTGGTTaGGATACCAGGAGGCCGCCT | + |
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Preference number: 4 (lower is better) Translates to: LPALFTDGWGLACPLSAPGPRCG*DTRRPP Trigger: AGGCGGCCTCCTGGTATCTCAACCACAGCGGGGACC...GGGAGCAGAGAGCGGGCACGCTAGCCCCCAGCCGTCTGTGAAGAGCGCAGGTAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR GCA 90 bp | CTCTTCACAGACGGCTGGGGGCTAGCGTGCCCGCTCTCTGCTCCCGGGTCTGAGGTAGGAGTAGGGGGCTaGGTGGCGATAGAGAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: LFTDGWGLACPLSAPGSEVGVGG*VAIERR Trigger: CCGCCTCTCTATCGCCACGCAGCCCCCTACTCCTAC...CTCAGACCCGGGAGCAGAGAGCGGGCACGCTAGCCCCCAGCCGTCTGTGAAGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CCA 90 bp | GGGCTGCGTCCCTTTGGAGGGGTTTCCTGGGATCCCAGAAACGGGGCGGCGAATTGGTTGGGTCGGGGCTaGGAAGCGAAGCCGGAGCGG | + |
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Preference number: 4 (lower is better) Translates to: GLRPFGGVSWDPRNGAANWLGRG*EAKPER Trigger: CCGCTCCGGCTTCGCTTCCCAGCCCCGACCCAACCA...ATTCGCCGCCCCGTTTCTGGGATCCCAGGAAACCCCTCCAAAGGGACGCAGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR GCA 90 bp | TTGGGCTGCGTCCCTTTGGAGGGGTTTCCTGGGATCCCAGAAACGGGGCGGCGAGGCTCATCGCTCGCATaGTGCACTGGTAGCCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: LGCVPLEGFPGIPETGRRGSSLA*CTGSPR Trigger: CCGGGGGCTACCAGTGCAGCATGCGAGCGATGAGCC...TCGCCGCCCCGTTTCTGGGATCCCAGGAAACCCCTCCAAAGGGACGCAGCCCAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CCA 90 bp | TTACCTGCGCTCTTCACAGACGGCTGGGGGCTAGCGTGCCCGCTCTCTGCTCCCGCATTGCCACTCACCTaGGACTCCCCGAGGGTCGAG | + |
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Preference number: 4 (lower is better) Translates to: LPALFTDGWGLACPLSAPALPLT*DSPRVE Trigger: CTCGACCCTCGGGGAGTCCCAGGTGAGTGGCAATGC...GGGAGCAGAGAGCGGGCACGCTAGCCCCCAGCCGTCTGTGAAGAGCGCAGGTAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR GCA 90 bp | CCCTTAATTGTCTGGTTGGGTCGGGGCTGGGAAGCGAAGCCGGAGCGGGCCGGGTTGGGGAAAGTTTGCTaGTGGGCCGCGAACGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: PLIVWLGRGWEAKPERAGLGKVC*WAANVW Trigger: CCACACGTTCGCGGCCCAGCAGCAAACTTTCCCCAA...CCCGGCCCGCTCCGGCTTCGCTTCCCAGCCCCGACCCAACCAGACAATTAAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CCA 90 bp | GGATCCCAGAAACGGGGCGGCGAATTAAAGTTACCTGCGCTCTTCACAGACGGCCCGTGGTGCTGGTGGTaGTGGCCCGTGGCGGCGAGC | + |
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Preference number: 4 (lower is better) Translates to: GSQKRGGELKLPALFTDGPWCWW*WPVAAS Trigger: GCTCGCCGCCACGGGCCACCACCACCAGCACCACGG...GCCGTCTGTGAAGAGCGCAGGTAACTTTAATTCGCCGCCCCGTTTCTGGGATCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CCA 90 bp | GGATCCCAGAAACGGGGCGGCGAATTAAAGTTACCTGCGCTCTTCACAGACGGCTGGTGGCCGTGGTGCTaGTGGTGGTGGCCCGTGGCG | + |
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Preference number: 4 (lower is better) Translates to: GSQKRGGELKLPALFTDGWWPWC*WWWPVA Trigger: CGCCACGGGCCACCACCACCAGCACCACGGCCACCA...GCCGTCTGTGAAGAGCGCAGGTAACTTTAATTCGCCGCCCCGTTTCTGGGATCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CCA 90 bp | CTCTTCACAGACGGCTGGGGGCTAGCGTGCCCGCTCTCTGCTCCCGGGTCTGAGACATCTCCCGCACGTTaGGGAAAGTTTGCTGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: LFTDGWGLACPLSAPGSETSPAR*GKFAAG Trigger: CCCAGCAGCAAACTTTCCCCAACGTGCGGGAGATGT...CTCAGACCCGGGAGCAGAGAGCGGGCACGCTAGCCCCCAGCCGTCTGTGAAGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CCA 90 bp | TTACCTGCGCTCTTCACAGACGGCTGGGGGCTAGCGTGCCCGCTCTCTGCTCCCTTTGGAGGGGTTTCCTaGGATCCCAGAAACGGGGCG | + |
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Preference number: 4 (lower is better) Translates to: LPALFTDGWGLACPLSAPFGGVS*DPRNGA Trigger: CGCCCCGTTTCTGGGATCCCAGGAAACCCCTCCAAA...GGGAGCAGAGAGCGGGCACGCTAGCCCCCAGCCGTCTGTGAAGAGCGCAGGTAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CCA 90 bp | TTCCTGGGATCCCAGAAACGGGGCGGCGAATTAAAGTTACCTGCGCTCTTCACAGCGAGCGCGCCCTCCTaGCCGGCGGCGAGGTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: FLGSQKRGGELKLPALFTASAPS*PAARLR Trigger: TCTCAACCTCGCCGCCGGCCAGGAGGGCGCGCTCGC...TGTGAAGAGCGCAGGTAACTTTAATTCGCCGCCCCGTTTCTGGGATCCCAGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR TCA 90 bp | GGATCCCAGAAACGGGGCGGCGAATTAAAGTTACCTGCGCTCTTCACAGACGGCGAGCGGCTGCCCCGCTaGGCCCAGAAAAAGAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: GSQKRGGELKLPALFTDGERLPR*AQKKRP Trigger: TGGCCTCTTTTTCTGGGCTCAGCGGGGCAGCCGCTC...GCCGTCTGTGAAGAGCGCAGGTAACTTTAATTCGCCGCCCCGTTTCTGGGATCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR GCA 90 bp | GCGTCTCTGCAGCCCCTTAATTGTCTGGTTGGGTCGGGGCTGGGAAGCGAAGCCCCAGGGTCCAGTAACTaGCCTTGCCGGGCTTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: ASLQPLNCLVGSGLGSEAPGSSN*PCRASC Trigger: ACAAGAAGCCCGGCAAGGGCAGTTACTGGACCCTGG...GGCTTCGCTTCCCAGCCCCGACCCAACCAGACAATTAAGGGGCTGCAGAGACGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR GCA 90 bp | CCCTTAATTGTCTGGTTGGGTCGGGGCTGGGAAGCGAAGCCGGAGCGGGCCGGGCTCATTTTGTTGGGCTaGGTCCCTTTGGAGGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: PLIVWLGRGWEAKPERAGLILLG*VPLEGF Trigger: AAACCCCTCCAAAGGGACGCAGCCCAACAAAATGAG...CCCGGCCCGCTCCGGCTTCGCTTCCCAGCCCCGACCCAACCAGACAATTAAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CCA 90 bp | GCGTCTCTGCAGCCCCTTAATTGTCTGGTTGGGTCGGGGCTGGGAAGCGAAGCCTTCAGGTCCCCGCTGTaGTTGAGATACCAGGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: ASLQPLNCLVGSGLGSEAFRSPL*LRYQEA Trigger: GGCCTCCTGGTATCTCAACCACAGCGGGGACCTGAA...GGCTTCGCTTCCCAGCCCCGACCCAACCAGACAATTAAGGGGCTGCAGAGACGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CCA 90 bp | GCGTCTCTGCAGCCCCTTAATTGTCTGGTTGGGTCGGGGCTGGGAAGCGAAGCCTCAATCCCCAGCCGGTaGGAGTTGAACATCTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: ASLQPLNCLVGSGLGSEASIPSR*ELNISR Trigger: GCGGGAGATGTTCAACTCCCACCGGCTGGGGATTGA...GGCTTCGCTTCCCAGCCCCGACCCAACCAGACAATTAAGGGGCTGCAGAGACGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR GCA 90 bp | GGATCCCAGAAACGGGGCGGCGAATTAAAGTTACCTGCGCTCTTCACAGACGGCAGTAGCGCGCCTGCATaGTGCTTCCGAGACGGCTCG | + |
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Preference number: 4 (lower is better) Translates to: GSQKRGGELKLPALFTDGSSAPA*CFRDGS Trigger: CGAGCCGTCTCGGAAGCAGCATGCAGGCGCGCTACT...GCCGTCTGTGAAGAGCGCAGGTAACTTTAATTCGCCGCCCCGTTTCTGGGATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CCA 90 bp | ACTCATTTTGTTGGGCTGCGTCCCTTTGGAGGGGTTTCCTGGGATCCCAGAAACCTCTTCACAGACGGCTaGGGGCTAGCGTGCCCGCTC | + |
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Preference number: 4 (lower is better) Translates to: THFVGLRPFGGVSWDPRNLFTDG*GLACPL Trigger: GAGCGGGCACGCTAGCCCCCAGCCGTCTGTGAAGAG...GTTTCTGGGATCCCAGGAAACCCCTCCAAAGGGACGCAGCCCAACAAAATGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR TCA 90 bp | ACTCATTTTGTTGGGCTGCGTCCCTTTGGAGGGGTTTCCTGGGATCCCAGAAACCCAGCCGGTGGGAGTTaGACATCTCCCGCACGTTGG | + |
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Preference number: 4 (lower is better) Translates to: THFVGLRPFGGVSWDPRNPAGGS*TSPARW Trigger: CCAACGTGCGGGAGATGTTCAACTCCCACCGGCTGG...GTTTCTGGGATCCCAGGAAACCCCTCCAAAGGGACGCAGCCCAACAAAATGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CCA 90 bp | CAATACTCATTTTGTTGGGCTGCGTCCCTTTGGAGGGGTTTCCTGGGATCCCAGGATAGAGAGGCGGCGTaGATCTGTAGGGCAGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: QYSFCWAASLWRGFLGSQDREAA*ICRAAG Trigger: GCCAGCTGCCCTACAGATCCACGCCGCCTCTCTATC...CTGGGATCCCAGGAAACCCCTCCAAAGGGACGCAGCCCAACAAAATGAGTATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR TCA 90 bp | CAATACTCATTTTGTTGGGCTGCGTCCCTTTGGAGGGGTTTCCTGGGATCCCAGCTCTGCTCCCGGGTCTaGGAAAAGGTTGGTGGACAT | + |
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Preference number: 4 (lower is better) Translates to: QYSFCWAASLWRGFLGSQLCSRV*EKVGGH Trigger: ATGTCCACCAACCTTTTCTCAGACCCGGGAGCAGAG...CTGGGATCCCAGGAAACCCCTCCAAAGGGACGCAGCCCAACAAAATGAGTATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CCA 90 bp | TTCCTGGGATCCCAGAAACGGGGCGGCGAATTAAAGTTACCTGCGCTCTTCACAAGCCCCTTAATTGTCTaGTTGGGTCGGGGCTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: FLGSQKRGGELKLPALFTSPLIV*LGRGWE Trigger: TTCCCAGCCCCGACCCAACCAGACAATTAAGGGGCT...TGTGAAGAGCGCAGGTAACTTTAATTCGCCGCCCCGTTTCTGGGATCCCAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR TCA 90 bp | ACAGGAAACAAAACCCACATCGGTTTCTTGAATTCAATTTGGCAGTTAGAAATGGGCCGGCGGCGAGGTTaGGAGCGCTCAGGGGCGACG | + |
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Preference number: 4 (lower is better) Translates to: TGNKTHIGFLNSIWQLEMGRRRG*ERSGAT Trigger: CGTCGCCCCTGAGCGCTCTCAACCTCGCCGCCGGCC...CATTTCTAACTGCCAAATTGAATTCAAGAAACCGATGTGGGTTTTGTTTCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR GCA 90 bp | GGGATCCCAGAAACGGGGCGGCGAATTAAAGTTACCTGCGCTCTTCACAGACGGCGAATTAAAGTTACCTaGGCTCTTCACAGACGGCTG | + |
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Preference number: 4 (lower is better) Translates to: GIPETGRRIKVTCALHRRRIKVT*ALHRRL Trigger: CAGCCGTCTGTGAAGAGCGCAGGTAACTTTAATTCG...CCGTCTGTGAAGAGCGCAGGTAACTTTAATTCGCCGCCCCGTTTCTGGGATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CCA 90 bp | AATGGCTCTGAACAACAACAACAACAACAAAATAGCCTGATTACAAATCCACACAGCCAGGCAGCCCGTTaGGCGCCGCGGCGTGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: NGSEQQQQQQNSLITNPHSQAAR*APRRGA Trigger: AGCACCACGCCGCGGCGCCCAACGGGCTGCCTGGCT...GTGTGGATTTGTAATCAGGCTATTTTGTTGTTGTTGTTGTTGTTCAGAGCCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CCA 90 bp | AATGGCTCTGAACAACAACAACAACAACAAAATAGCCTGATTACAAATCCACACGGCGCCTGCGGGTGGTaGTGGCCGTGGTGCTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: NGSEQQQQQQNSLITNPHGACGW*WPWCWW Trigger: CCACCAGCACCACGGCCACCACCACCCGCAGGCGCC...GTGTGGATTTGTAATCAGGCTATTTTGTTGTTGTTGTTGTTGTTCAGAGCCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR TCA 90 bp | GGGATCCCAGAAACGGGGCGGCGAATTAAAGTTACCTGCGCTCTTCACAGACGGAATGGTTGGGCAAGATaGAAAACTTATCCAGTGAAC | + |
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Preference number: 4 (lower is better) Translates to: GIPETGRRIKVTCALHRRNGWAR*KTYPVN Trigger: GTTCACTGGATAAGTTTTTCATCTTGCCCAACCATT...CCGTCTGTGAAGAGCGCAGGTAACTTTAATTCGCCGCCCCGTTTCTGGGATCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR GCA 90 bp | ACAGGAAACAAAACCCACATCGGTTTCTTGAATTCAATTTGGCAGTTAGAAATGCGGGGTCCGAGCGGCTaGCCCGCTGAGCCCAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TGNKTHIGFLNSIWQLEMRGPSG*PAEPRK Trigger: TTTTCTGGGCTCAGCGGGGCAGCCGCTCGGACCCCG...CATTTCTAACTGCCAAATTGAATTCAAGAAACCGATGTGGGTTTTGTTTCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR GCA 90 bp | ACAAATCCACACATTTGTACAGCACGGTTGGAGAAATTTAAAATTACACACAGCAGCGCGCCTGCATGCTaGTTCCGAGACGGCTCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: TNPHICTARLEKFKITHSSAPAC*FRDGSP Trigger: CGGCGAGCCGTCTCGGAAGCAGCATGCAGGCGCGCT...GCTGTGTGTAATTTTAAATTTCTCCAACCGTGCTGTACAAATGTGTGGATTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CCA 90 bp | TTGTACAGGAAACAAAACCCACATCGGTTTCTTGAATTCAATTTGGCAGTTAGAAGACGCCCATGGGGCTaGCCATGCCGCCGTAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LYRKQNPHRFLEFNLAVRRRPWG*PCRRSC Trigger: GCAGCTACGGCGGCATGGCCAGCCCCATGGGCGTCT...TCTAACTGCCAAATTGAATTCAAGAAACCGATGTGGGTTTTGTTTCCTGTACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CCA 90 bp | TTGTACAGGAAACAAAACCCACATCGGTTTCTTGAATTCAATTTGGCAGTTAGAGTGTGGCCGGGGAGGTaGTTCAGGTCCCCGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LYRKQNPHRFLEFNLAVRVWPGR*FRSPLW Trigger: CCACAGCGGGGACCTGAACCACCTCCCCGGCCACAC...TCTAACTGCCAAATTGAATTCAAGAAACCGATGTGGGTTTTGTTTCCTGTACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR TCA 90 bp | ACAAATCCACACATTTGTACAGCACGGTTGGAGAAATTTAAAATTACACACAGCACACGTCCTTCTTTTTaGAGCGCCGCCGGCGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: TNPHICTARLEKFKITHSTRPSF*SAAGAA Trigger: TGCGGCGCCGGCGGCGCTTCAAAAAGAAGGACGTGT...GCTGTGTGTAATTTTAAATTTCTCCAACCGTGCTGTACAAATGTGTGGATTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR GCA 90 bp | ACAGGAAACAAAACCCACATCGGTTTCTTGAATTCAATTTGGCAGTTAGAAATGCCATGCCGCCGTAGCTaGCCGCAGCCCGGTAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: TGNKTHIGFLNSIWQLEMPCRRS*PQPGSN Trigger: ATTACTACCGGGCTGCGGGCAGCTACGGCGGCATGG...CATTTCTAACTGCCAAATTGAATTCAAGAAACCGATGTGGGTTTTGTTTCCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR GCA 90 bp | TGTACAGGAAACAAAACCCACATCGGTTTCTTGAATTCAATTTGGCAGTTAGAAGCTGGCAGCTGGCATTaGCACTCACCTGGGACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: CTGNKTHIGFLNSIWQLEAGSWH*HSPGTP Trigger: GGGAGTCCCAGGTGAGTGGCAATGCCAGCTGCCAGC...TTCTAACTGCCAAATTGAATTCAAGAAACCGATGTGGGTTTTGTTTCCTGTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CCA 90 bp | ACAGGAAACAAAACCCACATCGGTTTCTTGAATTCAATTTGGCAGTTAGAAATGGGGAAAGTTTGCTGCTaGGCCGCGAACGTGTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: TGNKTHIGFLNSIWQLEMGKVCC*AANVWP Trigger: CGGCCACACGTTCGCGGCCCAGCAGCAAACTTTCCC...CATTTCTAACTGCCAAATTGAATTCAAGAAACCGATGTGGGTTTTGTTTCCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CCA 90 bp | TTGTACAGGAAACAAAACCCACATCGGTTTCTTGAATTCAATTTGGCAGTTAGAAGGGCAGCTGGCAGCTaGCATTGCCACTCACCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LYRKQNPHRFLEFNLAVRRAAGS*HCHSPG Trigger: CCCAGGTGAGTGGCAATGCCAGCTGCCAGCTGCCCT...TCTAACTGCCAAATTGAATTCAAGAAACCGATGTGGGTTTTGTTTCCTGTACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR TCA 90 bp | ACAAATCCACACATTTGTACAGCACGGTTGGAGAAATTTAAAATTACACACAGCACGCCGCCTCGCTCTTaGTCACCACCTTCTTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: TNPHICTARLEKFKITHSTPPRS*SPPSSR Trigger: CCGAGAAGAAGGTGGTGATCAAGAGCGAGGCGGCGT...GCTGTGTGTAATTTTAAATTTCTCCAACCGTGCTGTACAAATGTGTGGATTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CCA 90 bp | TACAGGAAACAAAACCCACATCGGTTTCTTGAATTCAATTTGGCAGTTAGAAATTGGGCTGCGTCCCTTTaGAGGGGTTTCCTGGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: YRKQNPHRFLEFNLAVRNWAASL*RGFLGS Trigger: GGATCCCAGGAAACCCCTCCAAAGGGACGCAGCCCA...ATTTCTAACTGCCAAATTGAATTCAAGAAACCGATGTGGGTTTTGTTTCCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR GCA 90 bp | TGTACAGGAAACAAAACCCACATCGGTTTCTTGAATTCAATTTGGCAGTTAGAACACGTCAGTATTTCGTaGAGTCGTAGGAGTAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CTGNKTHIGFLNSIWQLEHVSIS*SRRSRG Trigger: CCCCCTACTCCTACGACTGCACGAAATACTGACGTG...TTCTAACTGCCAAATTGAATTCAAGAAACCGATGTGGGTTTTGTTTCCTGTACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CCA 90 bp | TTGTACAGGAAACAAAACCCACATCGGTTTCTTGAATTCAATTTGGCAGTTAGACAATACTCATTTTGTTaGGCTGCGTCCCTTTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LYRKQNPHRFLEFNLAVRQYSFC*AASLWR Trigger: CCTCCAAAGGGACGCAGCCCAACAAAATGAGTATTG...TCTAACTGCCAAATTGAATTCAAGAAACCGATGTGGGTTTTGTTTCCTGTACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS CCA 90 bp | GGCGGCCGCGGACCCAGCGGAGACGCCGCGGCCTGGGGACCCAGGTaGACCCTCGGCCCGCGCGAGGAGGGGCGCAGGAGGCTCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GGRGPSGDAAAWGPR*TLGPREEGRRRLSK Trigger: CTTGGAGAGCCTCCTGCGCCCCTCCTCGCGCGGGCCGAGGGTCCACCTGGGTCCCCAGGCCGCGGCGTCTCCGCTGGGTCCGCGGCCGCC 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS CCA 90 bp | CCGTGGTGCTGGTGGTGGTGGCCCGTGGCGGCGAGCGCGCCCTCCTaGCCGGCGGCGAGGTTGAGAGCGCTCAGGGGCGACGTGGGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PWCWWWWPVAASAPS*PAARLRALRGDVGP Trigger: CGGCCCCACGTCGCCCCTGAGCGCTCTCAACCTCGCCGCCGGCCAGGAGGGCGCGCTCGCCGCCACGGGCCACCACCACCAGCACCACGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS CCA 90 bp | GCGGCGAGGTTGAGAGCGCTCAGGGGCGACGTGGGGCCGCTCGGGTaGTCCGAGAGGGCCTCGTCCAGGGCGGGCGGGACGCACATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: AARLRALRGDVGPLG*SERASSRAGGTHMC Trigger: GCACATGTGCGTCCCGCCCGCCCTGGACGAGGCCCTCTCGGACCACCCGAGCGGCCCCACGTCGCCCCTGAGCGCTCTCAACCTCGCCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS GCA 90 bp | GGGTGGTCCGAGAGGGCCTCGTCCAGGGCGGGCGGGACGCACATGTaGGCCGGCCGCTCGGCCCCGGTGTACAGGCTCATCGCTCGCATG | + |
|
Preference number: 5 (lower is better) Translates to: GWSERASSRAGGTHM*AGRSAPVYRLIARM Trigger: CATGCGAGCGATGAGCCTGTACACCGGGGCCGAGCGGCCGGCGCACATGTGCGTCCCGCCCGCCCTGGACGAGGCCCTCTCGGACCACCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS CCA 90 bp | CCATCCCCGCGCTGTACTGCTCCGGGTGGCCGGAATAGACGCCCATaGGGCTGGCCATGCCGCCGTAGCTGCCCGCAGCCCGGTAGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: PSPRCTAPGGRNRRP*GWPCRRSCPQPGSN Trigger: ATTACTACCGGGCTGCGGGCAGCTACGGCGGCATGGCCAGCCCCATGGGCGTCTATTCCGGCCACCCGGAGCAGTACAGCGCGGGGATGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CAA 90 bp | GCGTCTCTGCAGCCCCTTAATTGTCTGGTTGGGTCGGGGCTGGGAAGCGAAGCCAAGCCAGGCAGCCCGTaGGGCGCCGCGGCGTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: ASLQPLNCLVGSGLGSEAKPGSP*GAAAWC Trigger: GCACCACGCCGCGGCGCCCAACGGGCTGCCTGGCTT...GGCTTCGCTTCCCAGCCCCGACCCAACCAGACAATTAAGGGGCTGCAGAGACGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS CCA 90 bp | CCGCGCTGTACTGCTCCGGGTGGCCGGAATAGACGCCCATGGGGCTaGCCATGCCGCCGTAGCTGCCCGCAGCCCGGTAGTAATTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PRCTAPGGRNRRPWG*PCRRSCPQPGSNSA Trigger: AGCAGAATTACTACCGGGCTGCGGGCAGCTACGGCGGCATGGCCAGCCCCATGGGCGTCTATTCCGGCCACCCGGAGCAGTACAGCGCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS GCA 90 bp | GGTGGCCGGAATAGACGCCCATGGGGCTGGCCATGCCGCCGTAGCTaGCCGCAGCCCGGTAGTAATTCTGCTCGCTCAGGTAGGGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: GGRNRRPWGWPCRRS*PQPGSNSARSGRAP Trigger: TGGTGCCCTACCTGAGCGAGCAGAATTACTACCGGGCTGCGGGCAGCTACGGCGGCATGGCCAGCCCCATGGGCGTCTATTCCGGCCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS GCA 90 bp | TGTACTGCTCCGGGTGGCCGGAATAGACGCCCATGGGGCTGGCCATaGCGCCGTAGCTGCCCGCAGCCCGGTAGTAATTCTGCTCGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: CTAPGGRNRRPWGWP*RRSCPQPGSNSARS Trigger: TGAGCGAGCAGAATTACTACCGGGCTGCGGGCAGCTACGGCGGCATGGCCAGCCCCATGGGCGTCTATTCCGGCCACCCGGAGCAGTACA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS GCA 90 bp | CCCAGCCGGTGGGAGTTGAACATCTCCCGCACGTTGGGGAAAGTTTaGTGCTGGGCCGCGAACGTGTGGCCGGGGAGGTGGTTCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PSRWELNISRTLGKV*CWAANVWPGRWFRS Trigger: GGACCTGAACCACCTCCCCGGCCACACGTTCGCGGCCCAGCAGCAAACTTTCCCCAACGTGCGGGAGATGTTCAACTCCCACCGGCTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CAA 90 bp | GGGCTGCGTCCCTTTGGAGGGGTTTCCTGGGATCCCAGAAACGGGGCGGCGAATCTCAGCGTCTCCACCTaGGTGATGACCGGCAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: GLRPFGGVSWDPRNGAANLSVST*VMTGSA Trigger: GGCGCTGCCGGTCATCACCAAGGTGGAGACGCTGAG...ATTCGCCGCCCCGTTTCTGGGATCCCAGGAAACCCCTCCAAAGGGACGCAGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS CCA 90 bp | TGCAGTCGTAGGAGTAGGGGGCTGCGTGGCGATAGAGAGGCGGCGTaGATCTGTAGGGCAGCTGGCAGCTGGCATTGCCACTCACCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: CSRRSRGLRGDREAA*ICRAAGSWHCHSPG Trigger: CCCAGGTGAGTGGCAATGCCAGCTGCCAGCTGCCCTACAGATCCACGCCGCCTCTCTATCGCCACGCAGCCCCCTACTCCTACGACTGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CAA 90 bp | TTACCTGCGCTCTTCACAGACGGCTGGGGGCTAGCGTGCCCGCTCTCTGCTCCCGACGCCGCCTCGCTCTaGATCACCACCTTCTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LPALFTDGWGLACPLSAPDAASL*ITTFFS Trigger: CGAGAAGAAGGTGGTGATCAAGAGCGAGGCGGCGTC...GGGAGCAGAGAGCGGGCACGCTAGCCCCCAGCCGTCTGTGAAGAGCGCAGGTAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CAA 90 bp | GCGTCTCTGCAGCCCCTTAATTGTCTGGTTGGGTCGGGGCTGGGAAGCGAAGCCAGGTCCCCGCTGTGGTaGAGATACCAGGAGGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: ASLQPLNCLVGSGLGSEARSPLW*RYQEAA Trigger: GGCGGCCTCCTGGTATCTCAACCACAGCGGGGACCT...GGCTTCGCTTCCCAGCCCCGACCCAACCAGACAATTAAGGGGCTGCAGAGACGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS CCA 90 bp | CGTGGCGATAGAGAGGCGGCGTGGATCTGTAGGGCAGCTGGCAGCTaGCATTGCCACTCACCTGGGACTCCCCGAGGGTCGAGTTCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: RGDREAAWICRAAGS*HCHSPGTPRGSSSQ Trigger: TTGAGAACTCGACCCTCGGGGAGTCCCAGGTGAGTGGCAATGCCAGCTGCCAGCTGCCCTACAGATCCACGCCGCCTCTCTATCGCCACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CAA 90 bp | TTGGGCTGCGTCCCTTTGGAGGGGTTTCCTGGGATCCCAGAAACGGGGCGGCGACACGTTGGGGAAAGTTaGCTGCTGGGCCGCGAACGT | + |
|
Preference number: 5 (lower is better) Translates to: LGCVPLEGFPGIPETGRRHVGES*LLGRER Trigger: ACGTTCGCGGCCCAGCAGCAAACTTTCCCCAACGTG...TCGCCGCCCCGTTTCTGGGATCCCAGGAAACCCCTCCAAAGGGACGCAGCCCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS GCA 90 bp | GATAGAGAGGCGGCGTGGATCTGTAGGGCAGCTGGCAGCTGGCATTaGCACTCACCTGGGACTCCCCGAGGGTCGAGTTCTCAATCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: DREAAWICRAAGSWH*HSPGTPRGSSSQSP Trigger: TGGGGATTGAGAACTCGACCCTCGGGGAGTCCCAGGTGAGTGGCAATGCCAGCTGCCAGCTGCCCTACAGATCCACGCCGCCTCTCTATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS GCA 90 bp | TCCCGGGACACGTCAGTATTTCGTGCAGTCGTAGGAGTAGGGGGCTaGGTGGCGATAGAGAGGCGGCGTGGATCTGTAGGGCAGCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SRDTSVFRAVVGVGG*VAIERRRGSVGQLA Trigger: TGCCAGCTGCCCTACAGATCCACGCCGCCTCTCTATCGCCACGCAGCCCCCTACTCCTACGACTGCACGAAATACTGACGTGTCCCGGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CAA 90 bp | TTGGGCTGCGTCCCTTTGGAGGGGTTTCCTGGGATCCCAGAAACGGGGCGGCGAGGCTCGCTATGGGATTaGGTCCATAACTTAACTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LGCVPLEGFPGIPETGRRGSLWD*VHNLTF Trigger: AAAAGTTAAGTTATGGACCAAATCCCATAGCGAGCC...TCGCCGCCCCGTTTCTGGGATCCCAGGAAACCCCTCCAAAGGGACGCAGCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CAA 90 bp | TACAGGAAACAAAACCCACATCGGTTTCTTGAATTCAATTTGGCAGTTAGAAATTGGCCGGCGGCGAGGTaGAGAGCGCTCAGGGGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: YRKQNPHRFLEFNLAVRNWPAAR*RALRGD Trigger: GTCGCCCCTGAGCGCTCTCAACCTCGCCGCCGGCCA...ATTTCTAACTGCCAAATTGAATTCAAGAAACCGATGTGGGTTTTGTTTCCTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CAA 90 bp | CAGAAAGTCACTAGGGGCTCGCTATGGGATTTGGTCCATAACTTAACTTTTGAAAGCTGGCAGCTGGCATaGCCACTCACCTGGGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: QKVTRGSLWDLVHNLTFESWQLA*PLTWDS Trigger: GGAGTCCCAGGTGAGTGGCAATGCCAGCTGCCAGCT...TTCAAAAGTTAAGTTATGGACCAAATCCCATAGCGAGCCCCTAGTGACTTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CAA 90 bp | ACTCATTTTGTTGGGCTGCGTCCCTTTGGAGGGGTTTCCTGGGATCCCAGAAACTCAATACTCATTTTGTaGGGCTGCGTCCCTTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: THFVGLRPFGGVSWDPRNSILIL*GCVPLE Trigger: CTCCAAAGGGACGCAGCCCAACAAAATGAGTATTGA...GTTTCTGGGATCCCAGGAAACCCCTCCAAAGGGACGCAGCCCAACAAAATGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CAA 90 bp | TACAGGAAACAAAACCCACATCGGTTTCTTGAATTCAATTTGGCAGTTAGAAATTTCTTCTCGGCCTCCTaGGGGGCGTCCGCTAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: YRKQNPHRFLEFNLAVRNFFSAS*GASARW Trigger: CCACCTAGCGGACGCCCCCAAGGAGGCCGAGAAGAA...ATTTCTAACTGCCAAATTGAATTCAAGAAACCGATGTGGGTTTTGTTTCCTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CAA 90 bp | TGTACAGGAAACAAAACCCACATCGGTTTCTTGAATTCAATTTGGCAGTTAGAACCCAGCCGGTGGGAGTaGAACATCTCCCGCACGTTG | + |
|
Preference number: 5 (lower is better) Translates to: CTGNKTHIGFLNSIWQLEPSRWE*NISRTL Trigger: CAACGTGCGGGAGATGTTCAACTCCCACCGGCTGGG...TTCTAACTGCCAAATTGAATTCAAGAAACCGATGTGGGTTTTGTTTCCTGTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CAA 90 bp | ACAAATCCACACATTTGTACAGCACGGTTGGAGAAATTTAAAATTACACACAGCCCCTTAATTGTCTGGTaGGGTCGGGGCTGGGAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: TNPHICTARLEKFKITHSPLIVW*GRGWEA Trigger: CGCTTCCCAGCCCCGACCCAACCAGACAATTAAGGG...GCTGTGTGTAATTTTAAATTTCTCCAACCGTGCTGTACAAATGTGTGGATTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CAA 90 bp | ACAGGAAACAAAACCCACATCGGTTTCTTGAATTCAATTTGGCAGTTAGAAATGCGCTCCTCCTTCTCCTaGGACACGTCCTTCTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TGNKTHIGFLNSIWQLEMRSSFS*DTSFFL Trigger: CAAAAAGAAGGACGTGTCCAAGGAGAAGGAGGAGCG...CATTTCTAACTGCCAAATTGAATTCAAGAAACCGATGTGGGTTTTGTTTCCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CAA 90 bp | CAGAAAGTCACTAGGGGCTCGCTATGGGATTTGGTCCATAACTTAACTTTTGAATACAAATCCACACATTaGTACAGCACGGTTGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: QKVTRGSLWDLVHNLTFEYKSTH*YSTVGE Trigger: TTCTCCAACCGTGCTGTACAAATGTGTGGATTTGTA...TTCAAAAGTTAAGTTATGGACCAAATCCCATAGCGAGCCCCTAGTGACTTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CAA 90 bp | TGTACAGGAAACAAAACCCACATCGGTTTCTTGAATTCAATTTGGCAGTTAGAAAGATCAATACTCATTTaGTTGGGCTGCGTCCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: CTGNKTHIGFLNSIWQLERSILI*LGCVPL Trigger: CAAAGGGACGCAGCCCAACAAAATGAGTATTGATCT...TTCTAACTGCCAAATTGAATTCAAGAAACCGATGTGGGTTTTGTTTCCTGTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS-3UTR CAA 90 bp | AATGGCTCTGAACAACAACAACAACAACAAAATAGCCTGATTACAAATCCACACACCCACATCGGTTTCTaGAATTCAATTTGGCAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: NGSEQQQQQQNSLITNPHTHIGF*NSIWQL Trigger: TAACTGCCAAATTGAATTCAAGAAACCGATGTGGGT...GTGTGGATTTGTAATCAGGCTATTTTGTTGTTGTTGTTGTTGTTCAGAGCCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS CCA 72 bp | ACGCTGAAGCCAGGCAGCCCGTTGGGCGCCGCGGCGTaGTGCTCCGGCAGCGAGCCGTCGGGGGAGCCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: TLKPGSPLGAAA*CSGSEPSGEPA Trigger: CGCCGGCTCCCCCGACGGCTCGCTGCCGGAGCACCACGCCGCGGCGCCCAACGGGCTGCCTGGCTTCAGCGT 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS CCA 72 bp | GGTGGTGGTGGCCGTGGTGCTGGTGGTGGTGGCCCGTaGCGGCGAGCGCGCCCTCCTGGCCGGCGGCGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: GGGGRGAGGGGP*RRARPPGRRRG Trigger: ACCTCGCCGCCGGCCAGGAGGGCGCGCTCGCCGCCACGGGCCACCACCACCAGCACCACGGCCACCACCACC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS CCA 72 bp | TGGTGGTGGTGGCCCGTGGCGGCGAGCGCGCCCTCCTaGCCGGCGGCGAGGTTGAGAGCGCTCAGGGGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: WWWWPVAASAPS*PAARLRALRGD Trigger: GTCGCCCCTGAGCGCTCTCAACCTCGCCGCCGGCCAGGAGGGCGCGCTCGCCGCCACGGGCCACCACCACCA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS CCA 72 bp | TTGAGAGCGCTCAGGGGCGACGTGGGGCCGCTCGGGTaGTCCGAGAGGGCCTCGTCCAGGGCGGGCGGGACG | + |
|
Preference number: 6 (lower is better) Translates to: LRALRGDVGPLG*SERASSRAGGT Trigger: CGTCCCGCCCGCCCTGGACGAGGCCCTCTCGGACCACCCGAGCGGCCCCACGTCGCCCCTGAGCGCTCTCAA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS GCA 72 bp | GAGAGGGCCTCGTCCAGGGCGGGCGGGACGCACATGTaGGCCGGCCGCTCGGCCCCGGTGTACAGGCTCATC | + |
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Preference number: 6 (lower is better) Translates to: ERASSRAGGTHM*AGRSAPVYRLI Trigger: GATGAGCCTGTACACCGGGGCCGAGCGGCCGGCGCACATGTGCGTCCCGCCCGCCCTGGACGAGGCCCTCTC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS CAA 72 bp | CCCTGCAGCGCGCTCTCGGGGCTCAGCGTCTCCACCTaGGTGATGACCGGCAGCGCCGGGGACGCCGCCTCG | + |
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Preference number: 6 (lower is better) Translates to: PCSALSGLSVST*VMTGSAGDAAS Trigger: CGAGGCGGCGTCCCCGGCGCTGCCGGTCATCACCAAGGTGGAGACGCTGAGCCCCGAGAGCGCGCTGCAGGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS TCA 72 bp | TGTGGCCGGGGAGGTGGTTCAGGTCCCCGCTGTGGTTaGGATACCAGGAGGCCGCCTGCGCCGCGGCGGCCC | + |
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Preference number: 6 (lower is better) Translates to: CGRGGGSGPRCG*DTRRPPAPRRP Trigger: GGGCCGCCGCGGCGCAGGCGGCCTCCTGGTATCTCAACCACAGCGGGGACCTGAACCACCTCCCCGGCCACA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS CAA 72 bp | GTGTGGCCGGGGAGGTGGTTCAGGTCCCCGCTGTGGTaGAGATACCAGGAGGCCGCCTGCGCCGCGGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: VWPGRWFRSPLW*RYQEAACAAAA Trigger: GGCCGCCGCGGCGCAGGCGGCCTCCTGGTATCTCAACCACAGCGGGGACCTGAACCACCTCCCCGGCCACAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS CAA 90 bp | CGCGGGCTGCCCTGCAGCGCGCTCTCGGGGCTCAGCGTCTCCACCTaGGTGATGACCGGCAGCGCCGGGGACGCCGCCTCGCTCTTGATC | + |
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Preference number: 6 (lower is better) Translates to: RGLPCSALSGLSVST*VMTGSAGDAASLLI Trigger: GATCAAGAGCGAGGCGGCGTCCCCGGCGCTGCCGGTCATCACCAAGGTGGAGACGCTGAGCCCCGAGAGCGCGCTGCAGGGCAGCCCGCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS CCA 72 bp | CGCTGTACTGCTCCGGGTGGCCGGAATAGACGCCCATaGGGCTGGCCATGCCGCCGTAGCTGCCCGCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: RCTAPGGRNRRP*GWPCRRSCPQP Trigger: GGGCTGCGGGCAGCTACGGCGGCATGGCCAGCCCCATGGGCGTCTATTCCGGCCACCCGGAGCAGTACAGCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS CCA 72 bp | ACTGCTCCGGGTGGCCGGAATAGACGCCCATGGGGCTaGCCATGCCGCCGTAGCTGCCCGCAGCCCGGTAGT | + |
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Preference number: 6 (lower is better) Translates to: TAPGGRNRRPWG*PCRRSCPQPGS Trigger: ACTACCGGGCTGCGGGCAGCTACGGCGGCATGGCCAGCCCCATGGGCGTCTATTCCGGCCACCCGGAGCAGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS CCA 72 bp | AACGTGTGGCCGGGGAGGTGGTTCAGGTCCCCGCTGTaGTTGAGATACCAGGAGGCCGCCTGCGCCGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: NVWPGRWFRSPL*LRYQEAACAAA Trigger: CGCCGCGGCGCAGGCGGCCTCCTGGTATCTCAACCACAGCGGGGACCTGAACCACCTCCCCGGCCACACGTT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS CAA 72 bp | GTGATGACCGGCAGCGCCGGGGACGCCGCCTCGCTCTaGATCACCACCTTCTTCTCGGCCTCCTTGGGGGCG | + |
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Preference number: 6 (lower is better) Translates to: VMTGSAGDAASL*ITTFFSASLGA Trigger: CGCCCCCAAGGAGGCCGAGAAGAAGGTGGTGATCAAGAGCGAGGCGGCGTCCCCGGCGCTGCCGGTCATCAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS CAA 90 bp | TCCACCTTGGTGATGACCGGCAGCGCCGGGGACGCCGCCTCGCTCTaGATCACCACCTTCTTCTCGGCCTCCTTGGGGGCGTCCGCTAGG | + |
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Preference number: 6 (lower is better) Translates to: STLVMTGSAGDAASL*ITTFFSASLGASAR Trigger: CCTAGCGGACGCCCCCAAGGAGGCCGAGAAGAAGGTGGTGATCAAGAGCGAGGCGGCGTCCCCGGCGCTGCCGGTCATCACCAAGGTGGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS GCA 72 bp | CCGGGTGGCCGGAATAGACGCCCATGGGGCTGGCCATaGCGCCGTAGCTGCCCGCAGCCCGGTAGTAATTCT | + |
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Preference number: 6 (lower is better) Translates to: PGGRNRRPWGWP*RRSCPQPGSNS Trigger: AGAATTACTACCGGGCTGCGGGCAGCTACGGCGGCATGGCCAGCCCCATGGGCGTCTATTCCGGCCACCCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS CCA 72 bp | AGGAGTAGGGGGCTGCGTGGCGATAGAGAGGCGGCGTaGATCTGTAGGGCAGCTGGCAGCTGGCATTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: RSRGLRGDREAA*ICRAAGSWHCH Trigger: GTGGCAATGCCAGCTGCCAGCTGCCCTACAGATCCACGCCGCCTCTCTATCGCCACGCAGCCCCCTACTCCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS GCA 72 bp | AATAGACGCCCATGGGGCTGGCCATGCCGCCGTAGCTaGCCGCAGCCCGGTAGTAATTCTGCTCGCTCAGGT | + |
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Preference number: 6 (lower is better) Translates to: NRRPWGWPCRRS*PQPGSNSARSG Trigger: ACCTGAGCGAGCAGAATTACTACCGGGCTGCGGGCAGCTACGGCGGCATGGCCAGCCCCATGGGCGTCTATT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS GCA 72 bp | GAGTTGAACATCTCCCGCACGTTGGGGAAAGTTTGCTaGTGGGCCGCGAACGTGTGGCCGGGGAGGTGGTTC | + |
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Preference number: 6 (lower is better) Translates to: ELNISRTLGKVC*WAANVWPGRWF Trigger: GAACCACCTCCCCGGCCACACGTTCGCGGCCCAGCAGCAAACTTTCCCCAACGTGCGGGAGATGTTCAACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS CCA 72 bp | TTGAACATCTCCCGCACGTTGGGGAAAGTTTGCTGCTaGGCCGCGAACGTGTGGCCGGGGAGGTGGTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: LNISRTLGKVCC*AANVWPGRWFR Trigger: CCTGAACCACCTCCCCGGCCACACGTTCGCGGCCCAGCAGCAAACTTTCCCCAACGTGCGGGAGATGTTCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS GCA 72 bp | ACGTCAGTATTTCGTGCAGTCGTAGGAGTAGGGGGCTaGGTGGCGATAGAGAGGCGGCGTGGATCTGTAGGG | + |
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Preference number: 6 (lower is better) Translates to: TSVFRAVVGVGG*VAIERRRGSVG Trigger: CCCTACAGATCCACGCCGCCTCTCTATCGCCACGCAGCCCCCTACTCCTACGACTGCACGAAATACTGACGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS CAA 72 bp | CCGAGGGTCGAGTTCTCAATCCCCAGCCGGTGGGAGTaGAACATCTCCCGCACGTTGGGGAAAGTTTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: PRVEFSIPSRWE*NISRTLGKVCC Trigger: GCAGCAAACTTTCCCCAACGTGCGGGAGATGTTCAACTCCCACCGGCTGGGGATTGAGAACTCGACCCTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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| CDS TCA 72 bp | CGAGGGTCGAGTTCTCAATCCCCAGCCGGTGGGAGTTaGACATCTCCCGCACGTTGGGGAAAGTTTGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: RGSSSQSPAGGS*TSPARWGKFAA Trigger: AGCAGCAAACTTTCCCCAACGTGCGGGAGATGTTCAACTCCCACCGGCTGGGGATTGAGAACTCGACCCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649859.1 |
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