Pregenerated sensors for FOXC1 (Homo sapiens)
Ensembl gene IDs: ENSG00000054598Ensembl transcript IDs: ENST00000645831.2
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGGTAAGACCGCGGCTGATTCATGGGCTTAAAATTTCCGAATCATaGACTGTCATTAGTGAGAAAACGTATTTGTTTATATGCCAACTC | + |
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Preference number: 1 (lower is better) Translates to: VVRPRLIHGLKISES*TVISEKTYLFICQL Trigger: GAGTTGGCATATAAACAAATACGTTTTCTCACTAATGACAGTCCATGATTCGGAAATTTTAAGCCCATGAATCAGCCGCGGTCTTACCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGCCGCACAGTCCCATCTCTCGGCACACAGGCATCACCGTGGTAAGACCGCGTTTGGGAACACTTTCTaGCGTTTGGTCCACGACATC | + |
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Preference number: 2 (lower is better) Translates to: LAAQSHLSAHRHHRGKTAFGNTF*RLVHDI Trigger: GATGTCGTGGACCAAACGCCAGAAAGTGTTCCCAAA...CGCGGTCTTACCACGGTGATGCCTGTGTGCCGAGAGATGGGACTGTGCGGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGCCGCACAGTCCCATCTCTCGGCACACAGGCATCACCGTGGTAAGACCGCGACTTTTAGTAAAATTTaGCATGGACTAGTCAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: LAAQSHLSAHRHHRGKTATFSKI*HGLVRG Trigger: CCCTCTGACTAGTCCATGTCAAATTTTACTAAAAGT...CGCGGTCTTACCACGGTGATGCCTGTGTGCCGAGAGATGGGACTGTGCGGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCGGCACACAGGCATCACCGTGGTAAGACCGCGGCTGATTCATGGGCTTAAAGGTGAGCTGAATTTTTaGAGGGATATTCTGTTCGCT | + |
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Preference number: 2 (lower is better) Translates to: SRHTGITVVRPRLIHGLKGELNF*RDILFA Trigger: AGCGAACAGAATATCCCTCCAAAAATTCAGCTCACC...TTTAAGCCCATGAATCAGCCGCGGTCTTACCACGGTGATGCCTGTGTGCCGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| 3UTR-3UTR TCA 90 bp | CCGCGGCTGATTCATGGGCTTAAAATTTCCGAATCATGGACTGTCATTAGTGAGTCGTGCTGGTGCTGGTaGGCTGAATTTTTGGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: PRLIHGLKISESWTVISESCWCW*AEFLEG Trigger: TCCCTCCAAAAATTCAGCTCACCAGCACCAGCACGA...CTCACTAATGACAGTCCATGATTCGGAAATTTTAAGCCCATGAATCAGCCGCGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| 3UTR-3UTR TCA 90 bp | CCGCGGCTGATTCATGGGCTTAAAATTTCCGAATCATGGACTGTCATTAGTGAGCTGGTGCTGGTGAGCTaGATTTTTGGAGGGATATTC | + |
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Preference number: 2 (lower is better) Translates to: PRLIHGLKISESWTVISELVLVS*IFGGIF Trigger: GAATATCCCTCCAAAAATTCAGCTCACCAGCACCAG...CTCACTAATGACAGTCCATGATTCGGAAATTTTAAGCCCATGAATCAGCCGCGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| 3UTR-3UTR TCA 90 bp | AATGGTTTAAAAAGAAACCACCCTAGACCAAAATGTTCTGCTCCTCTCGCCTTCTGTTCGCTGGTGTGGTaGATATTCTCAGGGGTTTTT | + |
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Preference number: 2 (lower is better) Translates to: NGLKRNHPRPKCSAPLAFCSLVW*IFSGVF Trigger: AAAAACCCCTGAGAATATTCACCACACCAGCGAACA...GAAGGCGAGAGGAGCAGAACATTTTGGTCTAGGGTGGTTTCTTTTTAAACCATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| 3UTR-3UTR CCA 90 bp | CCGCGGCTGATTCATGGGCTTAAAATTTCCGAATCATGGACTGTCATTAGTGAGTTTAACGTCAGGTTTTaGGAACACTTTCTGGCGTTT | + |
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Preference number: 2 (lower is better) Translates to: PRLIHGLKISESWTVISEFNVRF*EHFLAF Trigger: AAACGCCAGAAAGTGTTCCCAAAACCTGACGTTAAA...CTCACTAATGACAGTCCATGATTCGGAAATTTTAAGCCCATGAATCAGCCGCGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| 3UTR-3UTR TCA 90 bp | ATATGGAATACACAAGCCAAATATTTATCTGTGCATATCTGGCCGCACAGTCCCGGGAAAGCAGGTCTCTaGAAAGCAAGAAGAAACTTA | + |
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Preference number: 2 (lower is better) Translates to: IWNTQAKYLSVHIWPHSPGKAGL*KARRNL Trigger: TAAGTTTCTTCTTGCTTTTCAGAGACCTGCTTTCCC...GGGACTGTGCGGCCAGATATGCACAGATAAATATTTGGCTTGTGTATTCCATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| 3UTR-3UTR CCA 90 bp | AATGGTTTAAAAAGAAACCACCCTAGACCAAAATGTTCTGCTCCTCTCGCCTTCGGATATTCTGTTCGCTaGTGTGGTGAATATTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: NGLKRNHPRPKCSAPLAFGYSVR*CGEYSQ Trigger: CTGAGAATATTCACCACACCAGCGAACAGAATATCC...GAAGGCGAGAGGAGCAGAACATTTTGGTCTAGGGTGGTTTCTTTTTAAACCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| 3UTR-3UTR TCA 90 bp | AATGGTTTAAAAAGAAACCACCCTAGACCAAAATGTTCTGCTCCTCTCGCCTTCAAGTGGAGGTGGCTCTaGATTAATCGGTTAAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: NGLKRNHPRPKCSAPLAFKWRWL*INRLRK Trigger: TTTTCTTAACCGATTAATTCAGAGCCACCTCCACTT...GAAGGCGAGAGGAGCAGAACATTTTGGTCTAGGGTGGTTTCTTTTTAAACCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| 3UTR-3UTR GCA 90 bp | GGGAACACTTTCTGGCGTTTGGTCCACGACATCCAACTACAAATTAAAAATAAATCCTTTAGCTTTTCCTaGTTTGGGGTTCGATTTAGT | + |
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Preference number: 2 (lower is better) Translates to: GNTFWRLVHDIQLQIKNKSFSFS*FGVRFS Trigger: ACTAAATCGAACCCCAAAGCAGGAAAAGCTAAAGGA...TTTATTTTTAATTTGTAGTTGGATGTCGTGGACCAAACGCCAGAAAGTGTTCCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| 3UTR CAA 90 bp | GTTTCAGGCAATTTAACGTCAGGTTTTGGGAACACTTTCTGGCGTTaGGTCCACGACATCCAACTACAAATTAAAAATAAATTACTATGT | + |
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Preference number: 2 (lower is better) Translates to: VSGNLTSGFGNTFWR*VHDIQLQIKNKLLC Trigger: ACATAGTAATTTATTTTTAATTTGTAGTTGGATGTCGTGGACCAAACGCCAGAAAGTGTTCCCAAAACCTGACGTTAAATTGCCTGAAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGTAACACTGTCCTTTAATAAACCAAGATTTTGCTGTCTCTGTATAAAACAGGTTTCGATTTTGCCTTaGTGGGTTCCTTTAGCTTTT | + |
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Preference number: 2 (lower is better) Translates to: GVTLSFNKPRFCCLCIKQVSILP*WVPLAF Trigger: AAAAGCTAAAGGAACCCATCAAGGCAAAATCGAAAC...CTGTTTTATACAGAGACAGCAAAATCTTGGTTTATTAAAGGACAGTGTTACTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| 3UTR CCA 72 bp | TGGAATACACAAGCCAAATATTTATCTGTGCATATCTaGCCGCACAGTCCCATCTCTCGGCACACAGGCATC | + |
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Preference number: 3 (lower is better) Translates to: WNTQAKYLSVHI*PHSPISRHTGI Trigger: GATGCCTGTGTGCCGAGAGATGGGACTGTGCGGCCAGATATGCACAGATAAATATTTGGCTTGTGTATTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| 3UTR-3UTR CAA 90 bp | CCGCGGCTGATTCATGGGCTTAAAATTTCCGAATCATGGACTGTCATTAGTGAGTTAGCTTTTCCTGCTTaGGGGTTCGATTTAGTTCGG | + |
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Preference number: 3 (lower is better) Translates to: PRLIHGLKISESWTVISELAFPA*GFDLVR Trigger: CCGAACTAAATCGAACCCCAAAGCAGGAAAAGCTAA...CTCACTAATGACAGTCCATGATTCGGAAATTTTAAGCCCATGAATCAGCCGCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| 3UTR-3UTR CAA 90 bp | ATATGGAATACACAAGCCAAATATTTATCTGTGCATATCTGGCCGCACAGTCCCAACACTTTCTGGCGTTaGGTCCACGACATCCAACTA | + |
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Preference number: 3 (lower is better) Translates to: IWNTQAKYLSVHIWPHSPNTFWR*VHDIQL Trigger: TAGTTGGATGTCGTGGACCAAACGCCAGAAAGTGTT...GGGACTGTGCGGCCAGATATGCACAGATAAATATTTGGCTTGTGTATTCCATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| 3UTR CCA 72 bp | AGTTTTCTTCGTGCTGGTGCTGGTGAGCTGAATTTTTaGAGGGATATTCTGTTCGCTGGTGTGGTGAATATT | + |
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Preference number: 3 (lower is better) Translates to: SFLRAGAGELNF*RDILFAGVVNI Trigger: AATATTCACCACACCAGCGAACAGAATATCCCTCCAAAAATTCAGCTCACCAGCACCAGCACGAAGAAAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| 3UTR-3UTR CAA 90 bp | CCGCGGCTGATTCATGGGCTTAAAATTTCCGAATCATGGACTGTCATTAGTGAGAGTTTCGATTTTGCCTaGATGGGTTCCTTTAGCTTT | + |
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Preference number: 3 (lower is better) Translates to: PRLIHGLKISESWTVISESFDFA*MGSFSF Trigger: AAAGCTAAAGGAACCCATCAAGGCAAAATCGAAACT...CTCACTAATGACAGTCCATGATTCGGAAATTTTAAGCCCATGAATCAGCCGCGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| 3UTR CCA 72 bp | TCAGGCAATTTAACGTCAGGTTTTGGGAACACTTTCTaGCGTTTGGTCCACGACATCCAACTACAAATTAAA | + |
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Preference number: 3 (lower is better) Translates to: SGNLTSGFGNTF*RLVHDIQLQIK Trigger: TTTAATTTGTAGTTGGATGTCGTGGACCAAACGCCAGAAAGTGTTCCCAAAACCTGACGTTAAATTGCCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| 3UTR CCA 72 bp | CCGCGGCTGATTCATGGGCTTAAAATTTCCGAATCATaGACTGTCATTAGTGAGAAAACGTATTTGTTTATA | + |
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Preference number: 3 (lower is better) Translates to: PRLIHGLKISES*TVISEKTYLFI Trigger: TATAAACAAATACGTTTTCTCACTAATGACAGTCCATGATTCGGAAATTTTAAGCCCATGAATCAGCCGCGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR TCA 90 bp | CTGGCCGCACAGTCCCATCTCTCGGCACACAGGCATCACCGTGGTAAGACCGCGCAGGAGACTCTGCCCTaGGCTGCCGGCGAAGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: LAAQSHLSAHRHHRGKTAQETLP*AAGEGG Trigger: GCCGCCTTCGCCGGCAGCTCAGGGCAGAGTCTCCTG...CGCGGTCTTACCACGGTGATGCCTGTGTGCCGAGAGATGGGACTGTGCGGCCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR GCA 90 bp | CTGGCCGCACAGTCCCATCTCTCGGCACACAGGCATCACCGTGGTAAGACCGCGATGCCGCCCGGGTACTaGTCGGCGTGCGCAGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: LAAQSHLSAHRHHRGKTAMPPGY*SACAGC Trigger: GCACCCTGCGCACGCCGAGCAGTACCCGGGCGGCAT...CGCGGTCTTACCACGGTGATGCCTGTGTGCCGAGAGATGGGACTGTGCGGCCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR GCA 90 bp | CTGGCCGCACAGTCCCATCTCTCGGCACACAGGCATCACCGTGGTAAGACCGCGGACTCTGCCCTGAGCTaGCGGCGAAGGCGGCCAAAT | + |
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Preference number: 4 (lower is better) Translates to: LAAQSHLSAHRHHRGKTADSALS*RRRRPN Trigger: ATTTGGCCGCCTTCGCCGGCAGCTCAGGGCAGAGTC...CGCGGTCTTACCACGGTGATGCCTGTGTGCCGAGAGATGGGACTGTGCGGCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR TCA 90 bp | TCTCGGCACACAGGCATCACCGTGGTAAGACCGCGGCTGATTCATGGGCTTAAACCAGAAGGCCGGAGCTaGGCTCCGCGGCCGCGCTCT | + |
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Preference number: 4 (lower is better) Translates to: SRHTGITVVRPRLIHGLKPEGRS*APRPRS Trigger: AGAGCGCGGCCGCGGAGCTCAGCTCCGGCCTTCTGG...TTTAAGCCCATGAATCAGCCGCGGTCTTACCACGGTGATGCCTGTGTGCCGAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR CCA 90 bp | TCTCGGCACACAGGCATCACCGTGGTAAGACCGCGGCTGATTCATGGGCTTAAACTGAAGCCCTGGCTATaGTGCGGCGGCGGGGCGGAG | + |
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Preference number: 4 (lower is better) Translates to: SRHTGITVVRPRLIHGLKLKPWL*CGGGAE Trigger: CTCCGCCCCGCCGCCGCACCATAGCCAGGGCTTCAG...TTTAAGCCCATGAATCAGCCGCGGTCTTACCACGGTGATGCCTGTGTGCCGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR TCA 90 bp | CTGGCCGCACAGTCCCATCTCTCGGCACACAGGCATCACCGTGGTAAGACCGCGTCGTGCTGGTGCTGGTaGGCTGAATTTTTGGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: LAAQSHLSAHRHHRGKTASCWCW*AEFLEG Trigger: TCCCTCCAAAAATTCAGCTCACCAGCACCAGCACGA...CGCGGTCTTACCACGGTGATGCCTGTGTGCCGAGAGATGGGACTGTGCGGCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR GCA 90 bp | TCTCGGCACACAGGCATCACCGTGGTAAGACCGCGGCTGATTCATGGGCTTAAATCGGCGTGCGCAGGGTaGGAGTACACGCTCATGGGG | + |
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Preference number: 4 (lower is better) Translates to: SRHTGITVVRPRLIHGLKSACAG*EYTLMG Trigger: CCCCATGAGCGTGTACTCGCACCCTGCGCACGCCGA...TTTAAGCCCATGAATCAGCCGCGGTCTTACCACGGTGATGCCTGTGTGCCGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR GCA 90 bp | TCTCGGCACACAGGCATCACCGTGGTAAGACCGCGGCTGATTCATGGGCTTAAACCTTCCAGGAGACTCTaGCCTGAGCTGCCGGCGAAG | + |
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Preference number: 4 (lower is better) Translates to: SRHTGITVVRPRLIHGLKPSRRL*PELPAK Trigger: CTTCGCCGGCAGCTCAGGGCAGAGTCTCCTGGAAGG...TTTAAGCCCATGAATCAGCCGCGGTCTTACCACGGTGATGCCTGTGTGCCGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR GCA 90 bp | CCGCGGCTGATTCATGGGCTTAAAATTTCCGAATCATGGACTGTCATTAGTGAGAAGCCCTGGCTATGGTaGGGCGGCGGGGCGGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: PRLIHGLKISESWTVISEKPWLW*GGGAEG Trigger: GCCCTCCGCCCCGCCGCCGCACCATAGCCAGGGCTT...CTCACTAATGACAGTCCATGATTCGGAAATTTTAAGCCCATGAATCAGCCGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR CCA 90 bp | CGTGCTGGTGCTGGTGAGCTGAATTTTTGGAGGGATATTCTGTTCGCTGGTGTGTCGGTCTTGATGTCCTaGATGCGCACGGGCGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: RAGAGELNFWRDILFAGVSVLMS*MRTGGG Trigger: GCCGCCGCCCGTGCGCATCCAGGACATCAAGACCGA...CACACCAGCGAACAGAATATCCCTCCAAAAATTCAGCTCACCAGCACCAGCACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR CCA 90 bp | CTGGCCGCACAGTCCCATCTCTCGGCACACAGGCATCACCGTGGTAAGACCGCGTTATCTGTGCATATCTaGCCGCACAGTCCCATCTCT | + |
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Preference number: 4 (lower is better) Translates to: LAAQSHLSAHRHHRGKTALSVHI*PHSPIS Trigger: AGAGATGGGACTGTGCGGCCAGATATGCACAGATAA...CGCGGTCTTACCACGGTGATGCCTGTGTGCCGAGAGATGGGACTGTGCGGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR GCA 90 bp | CGTGCTGGTGCTGGTGAGCTGAATTTTTGGAGGGATATTCTGTTCGCTGGTGTGCCCTTCTCGCCACACTaGCTGCGCCTTCCAGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: RAGAGELNFWRDILFAGVPFSPH*LRLPGD Trigger: GTCTCCTGGAAGGCGCAGGCAGTGTGGCGAGAAGGG...CACACCAGCGAACAGAATATCCCTCCAAAAATTCAGCTCACCAGCACCAGCACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR CCA 90 bp | CTGGCCGCACAGTCCCATCTCTCGGCACACAGGCATCACCGTGGTAAGACCGCGACTATTCCCGTTCACTaGAGAGTTGTTCAAGCCGAT | + |
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Preference number: 4 (lower is better) Translates to: LAAQSHLSAHRHHRGKTATIPVH*RVVQAD Trigger: ATCGGCTTGAACAACTCTCCAGTGAACGGGAATAGT...CGCGGTCTTACCACGGTGATGCCTGTGTGCCGAGAGATGGGACTGTGCGGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR TCA 90 bp | TCTCGGCACACAGGCATCACCGTGGTAAGACCGCGGCTGATTCATGGGCTTAAACATCTCCCCAAAGTCTaGTTGGCAGGGCAGATCACC | + |
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Preference number: 4 (lower is better) Translates to: SRHTGITVVRPRLIHGLKHLPKV*LAGQIT Trigger: GGTGATCTGCCCTGCCAATCAGACTTTGGGGAGATG...TTTAAGCCCATGAATCAGCCGCGGTCTTACCACGGTGATGCCTGTGTGCCGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR GCA 90 bp | AGTTTTCTTCGTGCTGGTGCTGGTGAGCTGAATTTTTGGAGGGATATTCTGTTCCGCGGCAGACCGCCTTaGAGGAACTCGCGGCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SFLRAGAGELNFWRDILFRGRPP*RNSRRS Trigger: GCTGCGCCGCGAGTTCCTGCAAGGCGGTCTGCCGCG...GAACAGAATATCCCTCCAAAAATTCAGCTCACCAGCACCAGCACGAAGAAAACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR CCA 90 bp | AATGGTTTAAAAAGAAACCACCCTAGACCAAAATGTTCTGCTCCTCTCGCCTTCCGGGGCTCTCGATCTTaGGCACCGCGGCGGCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: NGLKRNHPRPKCSAPLAFRGSRS*APRRRC Trigger: GCAGCGCCGCCGCGGTGCCCAAGATCGAGAGCCCCG...GAAGGCGAGAGGAGCAGAACATTTTGGTCTAGGGTGGTTTCTTTTTAAACCATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR CCA 90 bp | AGTTTTCTTCGTGCTGGTGCTGGTGAGCTGAATTTTTGGAGGGATATTCTGTTCGGGGGCTGCTCCCGCTaGACAGGCTGCTGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SFLRAGAGELNFWRDILFGGCSR*TGCCCC Trigger: GCAGCAGCAGCAGCCTGTCCAGCGGGAGCAGCCCCC...GAACAGAATATCCCTCCAAAAATTCAGCTCACCAGCACCAGCACGAAGAAAACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR CCA 90 bp | AATGGTTTAAAAAGAAACCACCCTAGACCAAAATGTTCTGCTCCTCTCGCCTTCGTGAGGCGGCCTTGGTaGGCCGCAGGGTGGTGGCCG | + |
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Preference number: 4 (lower is better) Translates to: NGLKRNHPRPKCSAPLAFVRRPW*AAGWWP Trigger: CGGCCACCACCCTGCGGCCCACCAAGGCCGCCTCAC...GAAGGCGAGAGGAGCAGAACATTTTGGTCTAGGGTGGTTTCTTTTTAAACCATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR TCA 90 bp | AGTTTTCTTCGTGCTGGTGCTGGTGAGCTGAATTTTTGGAGGGATATTCTGTTCGCGGGGGCGGCTCCTTaGGGTGCAGCCTGTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: SFLRAGAGELNFWRDILFAGAAP*GAACPS Trigger: AGAAGGACAGGCTGCACCTCAAGGAGCCGCCCCCGC...GAACAGAATATCCCTCCAAAAATTCAGCTCACCAGCACCAGCACGAAGAAAACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR GCA 90 bp | CCGCGGCTGATTCATGGGCTTAAAATTTCCGAATCATGGACTGTCATTAGTGAGGGGTACTGCTCGGCGTaGGCAGGGTGCGAGTACACG | + |
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Preference number: 4 (lower is better) Translates to: PRLIHGLKISESWTVISEGYCSA*AGCEYT Trigger: CGTGTACTCGCACCCTGCGCACGCCGAGCAGTACCC...CTCACTAATGACAGTCCATGATTCGGAAATTTTAAGCCCATGAATCAGCCGCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR CCA 90 bp | TCTCGGCACACAGGCATCACCGTGGTAAGACCGCGGCTGATTCATGGGCTTAAAGGTACAGAGACTGGCTaGAAGGGAAGGCCATTTGAC | + |
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Preference number: 4 (lower is better) Translates to: SRHTGITVVRPRLIHGLKGTETG*KGRPFD Trigger: GTCAAATGGCCTTCCCTTCCAGCCAGTCTCTGTACC...TTTAAGCCCATGAATCAGCCGCGGTCTTACCACGGTGATGCCTGTGTGCCGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR CCA 90 bp | AGTTTTCTTCGTGCTGGTGCTGGTGAGCTGAATTTTTGGAGGGATATTCTGTTCGCGAGTACACGCTCATaGGGGCCGGCATGGCGGTGT | + |
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Preference number: 4 (lower is better) Translates to: SFLRAGAGELNFWRDILFASTRS*GPAWRC Trigger: ACACCGCCATGCCGGCCCCCATGAGCGTGTACTCGC...GAACAGAATATCCCTCCAAAAATTCAGCTCACCAGCACCAGCACGAAGAAAACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR CCA 90 bp | AATGGTTTAAAAAGAAACCACCCTAGACCAAAATGTTCTGCTCCTCTCGCCTTCTCCACGCTGAAGCCCTaGCTATGGTGCGGCGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: NGLKRNHPRPKCSAPLAFSTLKP*LWCGGG Trigger: CCCGCCGCCGCACCATAGCCAGGGCTTCAGCGTGGA...GAAGGCGAGAGGAGCAGAACATTTTGGTCTAGGGTGGTTTCTTTTTAAACCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR GCA 90 bp | CCGCGGCTGATTCATGGGCTTAAAATTTCCGAATCATGGACTGTCATTAGTGAGCGAAAGCTCCGGACGTaGGGTACAGAGACTGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: PRLIHGLKISESWTVISERKLRT*GTETGW Trigger: CCAGCCAGTCTCTGTACCGCACGTCCGGAGCTTTCG...CTCACTAATGACAGTCCATGATTCGGAAATTTTAAGCCCATGAATCAGCCGCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR GCA 90 bp | AATGGTTTAAAAAGAAACCACCCTAGACCAAAATGTTCTGCTCCTCTCGCCTTCTGGACAGGCTGCTGCTaGTGCTGTCGGGGCTCTCGA | + |
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Preference number: 4 (lower is better) Translates to: NGLKRNHPRPKCSAPLAFWTGCC*CCRGSR Trigger: TCGAGAGCCCCGACAGCAGCAGCAGCAGCCTGTCCA...GAAGGCGAGAGGAGCAGAACATTTTGGTCTAGGGTGGTTTCTTTTTAAACCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR CCA 90 bp | GGAGTAACACTGTCCTTTAATAAACCAAGATTTTGCTGTCTCTGTATAAAACAGTCATGGGGGCCGGCATaGCGGTGTAGCCGCCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GVTLSFNKPRFCCLCIKQSWGPA*RCSRPR Trigger: CCGGGGGCGGCTACACCGCCATGCCGGCCCCCATGA...CTGTTTTATACAGAGACAGCAAAATCTTGGTTTATTAAAGGACAGTGTTACTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS-3UTR CCA 90 bp | GGAGTAACACTGTCCTTTAATAAACCAAGATTTTGCTGTCTCTGTATAAAACAGCCGAGCTGCCCGCGCTaGAGGTCTGGCTGCAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GVTLSFNKPRFCCLCIKQPSCPR*RSGCRG Trigger: CCCCCTGCAGCCAGACCTCCAGCGCGGGCAGCTCGG...CTGTTTTATACAGAGACAGCAAAATCTTGGTTTATTAAAGGACAGTGTTACTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS-3UTR TCA 90 bp | ATATGGAATACACAAGCCAAATATTTATCTGTGCATATCTGGCCGCACAGTCCCACGAGCTGCTGCTGGTaGCCGGAGGCAGAGAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: IWNTQAKYLSVHIWPHSPTSCCW*PEAESS Trigger: ACTACTCTCTGCCTCCGGTCACCAGCAGCAGCTCGT...GGGACTGTGCGGCCAGATATGCACAGATAAATATTTGGCTTGTGTATTCCATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS-3UTR TCA 90 bp | AGTTTTCTTCGTGCTGGTGCTGGTGAGCTGAATTTTTGGAGGGATATTCTGTTCCAAGCCGATCCTCTGTaGCTCGAACATCTCCCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SFLRAGAGELNFWRDILFQADPL*LEHLPH Trigger: GTGCGGGAGATGTTCGAGTCACAGAGGATCGGCTTG...GAACAGAATATCCCTCCAAAAATTCAGCTCACCAGCACCAGCACGAAGAAAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS-3UTR CCA 90 bp | CAAGAAGAAACTTACGTGTTATCTGGAGTAACACTGTCCTTTAATAAACCAAGAGAGGTGAGGCGGCCTTaGTGGGCCGCAGGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QEETYVLSGVTLSFNKPREVRRP*WAAGWW Trigger: CCACCACCCTGCGGCCCACCAAGGCCGCCTCACCTC...TCTTGGTTTATTAAAGGACAGTGTTACTCCAGATAACACGTAAGTTTCTTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS-3UTR CCA 90 bp | CGTGCTGGTGCTGGTGAGCTGAATTTTTGGAGGGATATTCTGTTCGCTGGTGTGACACTTTCTGGCGTTTaGTCCACGACATCCAACTAC | + |
|
Preference number: 4 (lower is better) Translates to: RAGAGELNFWRDILFAGVTLSGV*STTSNY Trigger: GTAGTTGGATGTCGTGGACCAAACGCCAGAAAGTGT...CACACCAGCGAACAGAATATCCCTCCAAAAATTCAGCTCACCAGCACCAGCACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS-3UTR TCA 90 bp | CAAGAAGAAACTTACGTGTTATCTGGAGTAACACTGTCCTTTAATAAACCAAGATCAGGTACCACGAGGTaGGGCGGCCTTGGTGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: QEETYVLSGVTLSFNKPRSGTTR*GGLGGP Trigger: CGGCCCACCAAGGCCGCCTCACCTCGTGGTACCTGA...TCTTGGTTTATTAAAGGACAGTGTTACTCCAGATAACACGTAAGTTTCTTCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS-3UTR TCA 90 bp | CGTGCTGGTGCTGGTGAGCTGAATTTTTGGAGGGATATTCTGTTCGCTGGTGTGGATTTAGTTCGGCTTTaGGGGTGTGTCAAAACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RAGAGELNFWRDILFAGVDLVRL*GCVKTC Trigger: GCAAGTTTTGACACACCCTCAAAGCCGAACTAAATC...CACACCAGCGAACAGAATATCCCTCCAAAAATTCAGCTCACCAGCACCAGCACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS-3UTR GCA 90 bp | CAAGAAGAAACTTACGTGTTATCTGGAGTAACACTGTCCTTTAATAAACCAAGATCCCGCTGGACAGGCTaGTGCTGCTGCTGTCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QEETYVLSGVTLSFNKPRSRWTG*CCCCRG Trigger: GCCCCGACAGCAGCAGCAGCAGCCTGTCCAGCGGGA...TCTTGGTTTATTAAAGGACAGTGTTACTCCAGATAACACGTAAGTTTCTTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS-3UTR CCA 90 bp | GGGAACACTTTCTGGCGTTTGGTCCACGACATCCAACTACAAATTAAAAATAAAAGGTCTCCGCCCGCCTaGTTCAGGTACCACGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GNTFWRLVHDIQLQIKNKRSPPA*FRYHEV Trigger: CACCTCGTGGTACCTGAACCAGGCGGGCGGAGACCT...TTTATTTTTAATTTGTAGTTGGATGTCGTGGACCAAACGCCAGAAAGTGTTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS-3UTR GCA 90 bp | GGGAACACTTTCTGGCGTTTGGTCCACGACATCCAACTACAAATTAAAAATAAATCTCGCCACACTGCCTaGGCCTTCCAGGAGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GNTFWRLVHDIQLQIKNKSRHTA*AFQETL Trigger: CAGAGTCTCCTGGAAGGCGCAGGCAGTGTGGCGAGA...TTTATTTTTAATTTGTAGTTGGATGTCGTGGACCAAACGCCAGAAAGTGTTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS-3UTR GCA 90 bp | GGGAACACTTTCTGGCGTTTGGTCCACGACATCCAACTACAAATTAAAAATAAATCATGGCTTGCAGGTTaGAGTGGTAGGTCCCGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GNTFWRLVHDIQLQIKNKSWLAG*SGRSRR Trigger: GCGCCGGGACCTACCACTGCAACCTGCAAGCCATGA...TTTATTTTTAATTTGTAGTTGGATGTCGTGGACCAAACGCCAGAAAGTGTTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS-3UTR CCA 90 bp | CGTGCTGGTGCTGGTGAGCTGAATTTTTGGAGGGATATTCTGTTCGCTGGTGTGGGTGAGCTGAATTTTTaGAGGGATATTCTGTTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: RAGAGELNFWRDILFAGVGELNF*RDILFA Trigger: AGCGAACAGAATATCCCTCCAAAAATTCAGCTCACC...CACACCAGCGAACAGAATATCCCTCCAAAAATTCAGCTCACCAGCACCAGCACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS-3UTR TCA 90 bp | TTGGGAACACTTTCTGGCGTTTGGTCCACGACATCCAACTACAAATTAAAAATATACCGTTCTCGGTCTTaGTGTCCTGGATGCGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: LGTLSGVWSTTSNYKLKIYRSRS*CPGCAR Trigger: CCGTGCGCATCCAGGACATCAAGACCGAGAACGGTA...TATTTTTAATTTGTAGTTGGATGTCGTGGACCAAACGCCAGAAAGTGTTCCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS-3UTR TCA 90 bp | CGTGCTGGTGCTGGTGAGCTGAATTTTTGGAGGGATATTCTGTTCGCTGGTGTGAGCCTCAAAGCAAGCTaGCTATATAGTACATTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RAGAGELNFWRDILFAGVSLKAS*LYSTFC Trigger: GCAAAATGTACTATATAGTCAGCTTGCTTTGAGGCT...CACACCAGCGAACAGAATATCCCTCCAAAAATTCAGCTCACCAGCACCAGCACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS-3UTR CCA 90 bp | GGAGTAACACTGTCCTTTAATAAACCAAGATTTTGCTGTCTCTGTATAAAACAGGCTTCACCATGTCCTTaGGCTGCGGCTGCGGCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GVTLSFNKPRFCCLCIKQASPCP*AAAAAC Trigger: ACACGCCGCAGCCGCAGCCCAAGGACATGGTGAAGC...CTGTTTTATACAGAGACAGCAAAATCTTGGTTTATTAAAGGACAGTGTTACTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS-3UTR TCA 90 bp | CGTGCTGGTGCTGGTGAGCTGAATTTTTGGAGGGATATTCTGTTCGCTGGTGTGACTTTTAGTAAAATTTaGCATGGACTAGTCAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RAGAGELNFWRDILFAGVTFSKI*HGLVRG Trigger: CCCTCTGACTAGTCCATGTCAAATTTTACTAAAAGT...CACACCAGCGAACAGAATATCCCTCCAAAAATTCAGCTCACCAGCACCAGCACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS-3UTR GCA 90 bp | CAAGAAGAAACTTACGTGTTATCTGGAGTAACACTGTCCTTTAATAAACCAAGAACAGGCTGCTGCTGCTaGTGTCGGGGCTCTCGATCT | + |
|
Preference number: 4 (lower is better) Translates to: QEETYVLSGVTLSFNKPRTGCCC*CRGSRS Trigger: AGATCGAGAGCCCCGACAGCAGCAGCAGCAGCCTGT...TCTTGGTTTATTAAAGGACAGTGTTACTCCAGATAACACGTAAGTTTCTTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS-3UTR CCA 90 bp | GGAGTAACACTGTCCTTTAATAAACCAAGATTTTGCTGTCTCTGTATAAAACAGATCTCCCGCACCGAGTaGAAGTTCTGCTGCTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GVTLSFNKPRFCCLCIKQISRTE*KFCCWP Trigger: GGGCCAGCAGCAGAACTTCCACTCGGTGCGGGAGAT...CTGTTTTATACAGAGACAGCAAAATCTTGGTTTATTAAAGGACAGTGTTACTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS-3UTR CCA 90 bp | ATATGGAATACACAAGCCAAATATTTATCTGTGCATATCTGGCCGCACAGTCCCTTTGGGAACACTTTCTaGCGTTTGGTCCACGACATC | + |
|
Preference number: 4 (lower is better) Translates to: IWNTQAKYLSVHIWPHSPFGNTF*RLVHDI Trigger: GATGTCGTGGACCAAACGCCAGAAAGTGTTCCCAAA...GGGACTGTGCGGCCAGATATGCACAGATAAATATTTGGCTTGTGTATTCCATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS-3UTR TCA 90 bp | TTGGGAACACTTTCTGGCGTTTGGTCCACGACATCCAACTACAAATTAAAAATAGAAGGGAAGGCCATTTaGCAGCTACTATTCCCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGTLSGVWSTTSNYKLKIEGKAI*QLLFPF Trigger: GAACGGGAATAGTAGCTGTCAAATGGCCTTCCCTTC...TATTTTTAATTTGTAGTTGGATGTCGTGGACCAAACGCCAGAAAGTGTTCCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS-3UTR CCA 90 bp | CAAGAAGAAACTTACGTGTTATCTGGAGTAACACTGTCCTTTAATAAACCAAGAGTGCGGTACAGAGACTaGCTGGAAGGGAAGGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: QEETYVLSGVTLSFNKPRVRYRD*LEGKAI Trigger: AATGGCCTTCCCTTCCAGCCAGTCTCTGTACCGCAC...TCTTGGTTTATTAAAGGACAGTGTTACTCCAGATAACACGTAAGTTTCTTCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS-3UTR TCA 90 bp | GGGAACACTTTCTGGCGTTTGGTCCACGACATCCAACTACAAATTAAAAATAAACTGGTGCTGGTGAGCTaGATTTTTGGAGGGATATTC | + |
|
Preference number: 4 (lower is better) Translates to: GNTFWRLVHDIQLQIKNKLVLVS*IFGGIF Trigger: GAATATCCCTCCAAAAATTCAGCTCACCAGCACCAG...TTTATTTTTAATTTGTAGTTGGATGTCGTGGACCAAACGCCAGAAAGTGTTCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS-3UTR TCA 90 bp | AGTTTTCTTCGTGCTGGTGCTGGTGAGCTGAATTTTTGGAGGGATATTCTGTTCAAGTGGAGGTGGCTCTaGATTAATCGGTTAAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SFLRAGAGELNFWRDILFKWRWL*INRLRK Trigger: TTTTCTTAACCGATTAATTCAGAGCCACCTCCACTT...GAACAGAATATCCCTCCAAAAATTCAGCTCACCAGCACCAGCACGAAGAAAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS-3UTR CCA 90 bp | ATATGGAATACACAAGCCAAATATTTATCTGTGCATATCTGGCCGCACAGTCCCGGATATTCTGTTCGCTaGTGTGGTGAATATTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IWNTQAKYLSVHIWPHSPGYSVR*CGEYSQ Trigger: CTGAGAATATTCACCACACCAGCGAACAGAATATCC...GGGACTGTGCGGCCAGATATGCACAGATAAATATTTGGCTTGTGTATTCCATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS-3UTR GCA 90 bp | GGGAACACTTTCTGGCGTTTGGTCCACGACATCCAACTACAAATTAAAAATAAAGGGTGTGTCAAAACTTaGTACAGTCGTAGACGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GNTFWRLVHDIQLQIKNKGCVKT*YSRRRK Trigger: CTTTCGTCTACGACTGTAGCAAGTTTTGACACACCC...TTTATTTTTAATTTGTAGTTGGATGTCGTGGACCAAACGCCAGAAAGTGTTCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS-3UTR TCA 90 bp | GGGAACACTTTCTGGCGTTTGGTCCACGACATCCAACTACAAATTAAAAATAAAGGGAAAGCAGGTCTCTaGAAAGCAAGAAGAAACTTA | + |
|
Preference number: 4 (lower is better) Translates to: GNTFWRLVHDIQLQIKNKGKAGL*KARRNL Trigger: TAAGTTTCTTCTTGCTTTTCAGAGACCTGCTTTCCC...TTTATTTTTAATTTGTAGTTGGATGTCGTGGACCAAACGCCAGAAAGTGTTCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS-3UTR GCA 90 bp | TTGGGAACACTTTCTGGCGTTTGGTCCACGACATCCAACTACAAATTAAAAATATCCTTTAGCTTTTCCTaGTTTGGGGTTCGATTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LGTLSGVWSTTSNYKLKISFSFS*FGVRFS Trigger: ACTAAATCGAACCCCAAAGCAGGAAAAGCTAAAGGA...TATTTTTAATTTGTAGTTGGATGTCGTGGACCAAACGCCAGAAAGTGTTCCCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS-3UTR GCA 90 bp | TTGGGAACACTTTCTGGCGTTTGGTCCACGACATCCAACTACAAATTAAAAATAAGCAACAGCAATTACTaGTTAAGTGTTGCCTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGTLSGVWSTTSNYKLKISNSNY*LSVASR Trigger: TCTAGAGGCAACACTTAAGCAGTAATTGCTGTTGCT...TATTTTTAATTTGTAGTTGGATGTCGTGGACCAAACGCCAGAAAGTGTTCCCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS-3UTR CCA 90 bp | TTGGGAACACTTTCTGGCGTTTGGTCCACGACATCCAACTACAAATTAAAAATATTTAACGTCAGGTTTTaGGAACACTTTCTGGCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LGTLSGVWSTTSNYKLKIFNVRF*EHFLAF Trigger: AAACGCCAGAAAGTGTTCCCAAAACCTGACGTTAAA...TATTTTTAATTTGTAGTTGGATGTCGTGGACCAAACGCCAGAAAGTGTTCCCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS-3UTR TCA 90 bp | GGGAACACTTTCTGGCGTTTGGTCCACGACATCCAACTACAAATTAAAAATAAACTTCTATGTAATACATaGAGGATTGTAAATGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GNTFWRLVHDIQLQIKNKLLCNT*RIVNGG Trigger: TCCCCCATTTACAATCCTTCATGTATTACATAGAAG...TTTATTTTTAATTTGTAGTTGGATGTCGTGGACCAAACGCCAGAAAGTGTTCCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS-3UTR CCA 90 bp | GGGAACACTTTCTGGCGTTTGGTCCACGACATCCAACTACAAATTAAAAATAAATATCTATTCAGCATCTaGCTCACAGGGATGTATAAT | + |
|
Preference number: 4 (lower is better) Translates to: GNTFWRLVHDIQLQIKNKYLFSI*LTGMYN Trigger: ATTATACATCCCTGTGAGCCAGATGCTGAATAGATA...TTTATTTTTAATTTGTAGTTGGATGTCGTGGACCAAACGCCAGAAAGTGTTCCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS-3UTR TCA 90 bp | CAAGAAGAAACTTACGTGTTATCTGGAGTAACACTGTCCTTTAATAAACCAAGAGTTTCGATTTTGCCTTaGTGGGTTCCTTTAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QEETYVLSGVTLSFNKPRVSILP*WVPLAF Trigger: AAAAGCTAAAGGAACCCATCAAGGCAAAATCGAAAC...TCTTGGTTTATTAAAGGACAGTGTTACTCCAGATAACACGTAAGTTTCTTCTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| 3UTR CAA 72 bp | AATTTAACGTCAGGTTTTGGGAACACTTTCTGGCGTTaGGTCCACGACATCCAACTACAAATTAAAAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: NLTSGFGNTFWR*VHDIQLQIKNK Trigger: TTTATTTTTAATTTGTAGTTGGATGTCGTGGACCAAACGCCAGAAAGTGTTCCCAAAACCTGACGTTAAATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS GCA 90 bp | GAGGGAGCTCTGGCCGGGCGAGTAGGCGCCGAGCGCCAGCGGGGGTaGGATCCCCGCGCGCGAGGACGCGGCCGCCGAGGCCAGAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: EGALAGRVGAERQRG*DPRARGRGRRGQKA Trigger: GGCCTTCTGGCCTCGGCGGCCGCGTCCTCGCGCGCGGGGATCGCACCCCCGCTGGCGCTCGGCGCCTACTCGCCCGGCCAGAGCTCCCTC 80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS CCA 90 bp | TCGTCCACGGCCGAGCCGCCCGCGCCCCCGGGCGCGCCCTGCAAGTaGCCCCCGCGCTCGCCGGCCGCGTACAGGCTCATGGCTTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSTAEPPAPPGAPCK*PPRSPAAYRLMACR Trigger: CCTGCAAGCCATGAGCCTGTACGCGGCCGGCGAGCGCGGGGGCCACTTGCAGGGCGCGCCCGGGGGCGCGGGCGGCTCGGCCGTGGACGA 80% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS CCA 90 bp | CGCCCGGGTACTGCTCGGCGTGCGCAGGGTGCGAGTACACGCTCATaGGGGCCGGCATGGCGGTGTAGCCGCCCCCGGCCGCCGCGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RPGTARRAQGASTRS*GPAWRCSRPRPPRP Trigger: CGGCCGCGGCGGCCGGGGGCGGCTACACCGCCATGCCGGCCCCCATGAGCGTGTACTCGCACCCTGCGCACGCCGAGCAGTACCCGGGCG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS CCA 90 bp | TCTCCGCCCGCCTGGTTCAGGTACCACGAGGTGAGGCGGCCTTGGTaGGCCGCAGGGTGGTGGCCGGCCTCCTGGCCTCCCCCGCCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SPPAWFRYHEVRRPW*AAGWWPASWPPPPP Trigger: CGGCGGCGGGGGAGGCCAGGAGGCCGGCCACCACCCTGCGGCCCACCAAGGCCGCCTCACCTCGTGGTACCTGAACCAGGCGGGCGGAGA 77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS CCA 90 bp | GCCGCCGCCGCCGCGCTCGCCAAGTGGCCCAGGTCTCCGCCCGCCTaGTTCAGGTACCACGAGGTGAGGCGGCCTTGGTGGGCCGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: AAAAALAKWPRSPPA*FRYHEVRRPWWAAG Trigger: CCCTGCGGCCCACCAAGGCCGCCTCACCTCGTGGTACCTGAACCAGGCGGGCGGAGACCTGGGCCACTTGGCGAGCGCGGCGGCGGCGGC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS GCA 90 bp | CATCTCCCGCACCGAGTGGAAGTTCTGCTGCTGGCCCGGGTAGCCTaGGGCCGCCGCCGCCGCCGCCGCGCTCGCCAAGTGGCCCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: HLPHRVEVLLLARVA*GRRRRRRARQVAQV Trigger: GACCTGGGCCACTTGGCGAGCGCGGCGGCGGCGGCGGCGGCCGCAGGCTACCCGGGCCAGCAGCAGAACTTCCACTCGGTGCGGGAGATG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS TCA 90 bp | CGCCGCCGCCGCCGCCGTGACTCAGGGACGACGAGCTGCTGCTGGTaGCCGGAGGCAGAGAGTAGTCGGGCAGGGGGTCGTCCACGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RRRRRRDSGTTSCCW*PEAESSRAGGRPRP Trigger: CGGCCGTGGACGACCCCCTGCCCGACTACTCTCTGCCTCCGGTCACCAGCAGCAGCTCGTCGTCCCTGAGTCACGGCGGCGGCGGCGGCG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS CCA 90 bp | GGCTGGGGCGGCGAGGGGCACGTACCGTTCTCGGTCTTGATGTCCTaGATGCGCACGGGCGGCGGCTGCGGACCGGGCGCGTTGCCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: GWGGEGHVPFSVLMS*MRTGGGCGPGALPS Trigger: CGACGGCAACGCGCCCGGTCCGCAGCCGCCGCCCGTGCGCATCCAGGACATCAAGACCGAGAACGGTACGTGCCCCTCGCCGCCCCAGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS TCA 90 bp | CCAAGTGGCCCAGGTCTCCGCCCGCCTGGTTCAGGTACCACGAGGTaGGGCGGCCTTGGTGGGCCGCAGGGTGGTGGCCGGCCTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PSGPGLRPPGSGTTR*GGLGGPQGGGRPPG Trigger: GCCAGGAGGCCGGCCACCACCCTGCGGCCCACCAAGGCCGCCTCACCTCGTGGTACCTGAACCAGGCGGGCGGAGACCTGGGCCACTTGG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS GCA 90 bp | TCGCTGCGAGGGGAGAAGGCCGGGCCCGGCCGCGGCAGACCGCCTTaGAGGAACTCGCGGCGCAGCTTCCAGGCGCAAACGGGGGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLRGEKAGPGRGRPP*RNSRRSFQAQTGES Trigger: GCTTTCCCCCGTTTGCGCCTGGAAGCTGCGCCGCGAGTTCCTGCAAGGCGGTCTGCCGCGGCCGGGCCCGGCCTTCTCCCCTCGCAGCGA 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS GCA 90 bp | GCCGCCGAGGCCAGAAGGCCGGAGCTGAGCTCCGCGGCCGCGCTCTaGGGCGACCCCCGCAGCGACGTCATGATGTTGTCCACGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: AAEARRPELSSAAAL*GDPRSDVMMLSTLK Trigger: CTTCAGCGTGGACAACATCATGACGTCGCTGCGGGGGTCGCCGCAGAGCGCGGCCGCGGAGCTCAGCTCCGGCCTTCTGGCCTCGGCGGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000645831.2 |
||
| CDS-3UTR CAA 90 bp | TCTCGGCACACAGGCATCACCGTGGTAAGACCGCGGCTGATTCATGGGCTTAAAGGCGGGGGCGGCTCCTaGAGGTGCAGCCTGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SRHTGITVVRPRLIHGLKGGGGS*RCSLSF Trigger: GAAGGACAGGCTGCACCTCAAGGAGCCGCCCCCGCC...TTTAAGCCCATGAATCAGCCGCGGTCTTACCACGGTGATGCCTGTGTGCCGAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR CAA 90 bp | CGTGCTGGTGCTGGTGAGCTGAATTTTTGGAGGGATATTCTGTTCGCTGGTGTGCGAGGTGAGGCGGCCTaGGTGGGCCGCAGGGTGGTG | + |
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Preference number: 5 (lower is better) Translates to: RAGAGELNFWRDILFAGVRGEAA*VGRRVV Trigger: CACCACCCTGCGGCCCACCAAGGCCGCCTCACCTCG...CACACCAGCGAACAGAATATCCCTCCAAAAATTCAGCTCACCAGCACCAGCACG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR CAA 90 bp | CTGGCCGCACAGTCCCATCTCTCGGCACACAGGCATCACCGTGGTAAGACCGCGAACACTTTCTGGCGTTaGGTCCACGACATCCAACTA | + |
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Preference number: 5 (lower is better) Translates to: LAAQSHLSAHRHHRGKTANTFWR*VHDIQL Trigger: TAGTTGGATGTCGTGGACCAAACGCCAGAAAGTGTT...CGCGGTCTTACCACGGTGATGCCTGTGTGCCGAGAGATGGGACTGTGCGGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS TCA 90 bp | GCTACTATTCCCGTTCACTGGAGAGTTGTTCAAGCCGATCCTCTGTaGCTCGAACATCTCCCGCACCGAGTGGAAGTTCTGCTGCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: ATIPVHWRVVQADPL*LEHLPHRVEVLLLA Trigger: GGCCAGCAGCAGAACTTCCACTCGGTGCGGGAGATGTTCGAGTCACAGAGGATCGGCTTGAACAACTCTCCAGTGAACGGGAATAGTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS TCA 90 bp | GCTCCGGACGTGCGGTACAGAGACTGGCTGGAAGGGAAGGCCATTTaGCAGCTACTATTCCCGTTCACTGGAGAGTTGTTCAAGCCGATC | + |
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Preference number: 5 (lower is better) Translates to: APDVRYRDWLEGKAI*QLLFPFTGELFKPI Trigger: GATCGGCTTGAACAACTCTCCAGTGAACGGGAATAGTAGCTGTCAAATGGCCTTCCCTTCCAGCCAGTCTCTGTACCGCACGTCCGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR CAA 90 bp | AATGGTTTAAAAAGAAACCACCCTAGACCAAAATGTTCTGCTCCTCTCGCCTTCCCGCGGCAGACCGCCTaGCAGGAACTCGCGGCGCAG | + |
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Preference number: 5 (lower is better) Translates to: NGLKRNHPRPKCSAPLAFPRQTA*QELAAQ Trigger: CTGCGCCGCGAGTTCCTGCAAGGCGGTCTGCCGCGG...GAAGGCGAGAGGAGCAGAACATTTTGGTCTAGGGTGGTTTCTTTTTAAACCATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS GCA 90 bp | GGGTGTGTCAAAACTTGCTACAGTCGTAGACGAAAGCTCCGGACGTaGGGTACAGAGACTGGCTGGAAGGGAAGGCCATTTGACAGCTAC | + |
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Preference number: 5 (lower is better) Translates to: GCVKTCYSRRRKLRT*GTETGWKGRPFDSY Trigger: GTAGCTGTCAAATGGCCTTCCCTTCCAGCCAGTCTCTGTACCGCACGTCCGGAGCTTTCGTCTACGACTGTAGCAAGTTTTGACACACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR CAA 90 bp | AGTTTTCTTCGTGCTGGTGCTGGTGAGCTGAATTTTTGGAGGGATATTCTGTTCGGCTTCACCATGTCCTaGGGCTGCGGCTGCGGCGTG | + |
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Preference number: 5 (lower is better) Translates to: SFLRAGAGELNFWRDILFGFTMS*GCGCGV Trigger: CACGCCGCAGCCGCAGCCCAAGGACATGGTGAAGCC...GAACAGAATATCCCTCCAAAAATTCAGCTCACCAGCACCAGCACGAAGAAAACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR CAA 90 bp | GGGAACACTTTCTGGCGTTTGGTCCACGACATCCAACTACAAATTAAAAATAAATCGGGGCTCTCGATCTaGGGCACCGCGGCGGCGCTG | + |
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Preference number: 5 (lower is better) Translates to: GNTFWRLVHDIQLQIKNKSGLSI*GTAAAL Trigger: CAGCGCCGCCGCGGTGCCCAAGATCGAGAGCCCCGA...TTTATTTTTAATTTGTAGTTGGATGTCGTGGACCAAACGCCAGAAAGTGTTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR CAA 90 bp | CCGCGGCTGATTCATGGGCTTAAAATTTCCGAATCATGGACTGTCATTAGTGAGAGCGACGTCATGATGTaGTCCACGCTGAAGCCCTGG | + |
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Preference number: 5 (lower is better) Translates to: PRLIHGLKISESWTVISESDVMM*STLKPW Trigger: CCAGGGCTTCAGCGTGGACAACATCATGACGTCGCT...CTCACTAATGACAGTCCATGATTCGGAAATTTTAAGCCCATGAATCAGCCGCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR CAA 90 bp | TCTCGGCACACAGGCATCACCGTGGTAAGACCGCGGCTGATTCATGGGCTTAAACGATTTAGTTCGGCTTaGAGGGTGTGTCAAAACTTG | + |
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Preference number: 5 (lower is better) Translates to: SRHTGITVVRPRLIHGLKRFSSA*RVCQNL Trigger: CAAGTTTTGACACACCCTCAAAGCCGAACTAAATCG...TTTAAGCCCATGAATCAGCCGCGGTCTTACCACGGTGATGCCTGTGTGCCGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR CAA 90 bp | CGTGCTGGTGCTGGTGAGCTGAATTTTTGGAGGGATATTCTGTTCGCTGGTGTGCCGCTTAAGGAAGCATaGGGAAAACTTCTGAACTTT | + |
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Preference number: 5 (lower is better) Translates to: RAGAGELNFWRDILFAGVPLKEA*GKLLNF Trigger: AAAGTTCAGAAGTTTTCCCAATGCTTCCTTAAGCGG...CACACCAGCGAACAGAATATCCCTCCAAAAATTCAGCTCACCAGCACCAGCACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR CAA 90 bp | GGAGTAACACTGTCCTTTAATAAACCAAGATTTTGCTGTCTCTGTATAAAACAGCTGTCCTTCTCCTCCTaGTCCTTCACCGCGTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: GVTLSFNKPRFCCLCIKQLSFSS*SFTASF Trigger: GAAGGACGCGGTGAAGGACAAGGAGGAGAAGGACAG...CTGTTTTATACAGAGACAGCAAAATCTTGGTTTATTAAAGGACAGTGTTACTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR CAA 90 bp | CAAGAAGAAACTTACGTGTTATCTGGAGTAACACTGTCCTTTAATAAACCAAGAGTACCGTTCTCGGTCTaGATGTCCTGGATGCGCACG | + |
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Preference number: 5 (lower is better) Translates to: QEETYVLSGVTLSFNKPRVPFSV*MSWMRT Trigger: CGTGCGCATCCAGGACATCAAGACCGAGAACGGTAC...TCTTGGTTTATTAAAGGACAGTGTTACTCCAGATAACACGTAAGTTTCTTCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR CAA 90 bp | TTGGGAACACTTTCTGGCGTTTGGTCCACGACATCCAACTACAAATTAAAAATACCGTTCACTGGAGAGTaGTTCAAGCCGATCCTCTGT | + |
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Preference number: 5 (lower is better) Translates to: LGTLSGVWSTTSNYKLKIPFTGE*FKPILC Trigger: ACAGAGGATCGGCTTGAACAACTCTCCAGTGAACGG...TATTTTTAATTTGTAGTTGGATGTCGTGGACCAAACGCCAGAAAGTGTTCCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR CAA 90 bp | GGGAACACTTTCTGGCGTTTGGTCCACGACATCCAACTACAAATTAAAAATAAAGAGGGCCAATCCGGATaGTCCCCTAGGTTTAACTGT | + |
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Preference number: 5 (lower is better) Translates to: GNTFWRLVHDIQLQIKNKEGQSG*SPRFNC Trigger: ACAGTTAAACCTAGGGGACAATCCGGATTGGCCCTC...TTTATTTTTAATTTGTAGTTGGATGTCGTGGACCAAACGCCAGAAAGTGTTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR CAA 90 bp | GGAGTAACACTGTCCTTTAATAAACCAAGATTTTGCTGTCTCTGTATAAAACAGGGAAGGGAAGGCCATTaGACAGCTACTATTCCCGTT | + |
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Preference number: 5 (lower is better) Translates to: GVTLSFNKPRFCCLCIKQGREGH*TATIPV Trigger: AACGGGAATAGTAGCTGTCAAATGGCCTTCCCTTCC...CTGTTTTATACAGAGACAGCAAAATCTTGGTTTATTAAAGGACAGTGTTACTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR CAA 90 bp | CAAGAAGAAACTTACGTGTTATCTGGAGTAACACTGTCCTTTAATAAACCAAGATTAGCTTTTCCTGCTTaGGGGTTCGATTTAGTTCGG | + |
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Preference number: 5 (lower is better) Translates to: QEETYVLSGVTLSFNKPRLAFPA*GFDLVR Trigger: CCGAACTAAATCGAACCCCAAAGCAGGAAAAGCTAA...TCTTGGTTTATTAAAGGACAGTGTTACTCCAGATAACACGTAAGTTTCTTCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS-3UTR CAA 90 bp | GGAGTAACACTGTCCTTTAATAAACCAAGATTTTGCTGTCTCTGTATAAAACAGAGTTTCGATTTTGCCTaGATGGGTTCCTTTAGCTTT | + |
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Preference number: 5 (lower is better) Translates to: GVTLSFNKPRFCCLCIKQSFDFA*MGSFSF Trigger: AAAGCTAAAGGAACCCATCAAGGCAAAATCGAAACT...CTGTTTTATACAGAGACAGCAAAATCTTGGTTTATTAAAGGACAGTGTTACTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS CCA 72 bp | CCTGCGGCCGCCGCCGCCGCCGCCGCGCTCGCCAAGTaGCCCAGGTCTCCGCCCGCCTGGTTCAGGTACCAC | + |
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Preference number: 6 (lower is better) Translates to: PAAAAAAAALAK*PRSPPAWFRYH Trigger: GTGGTACCTGAACCAGGCGGGCGGAGACCTGGGCCACTTGGCGAGCGCGGCGGCGGCGGCGGCGGCCGCAGG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS TCA 72 bp | TCCTGGCCTCCCCCGCCGCCGCCGCCGCCGCCGCCGTaGCTCAGGGACGACGAGCTGCTGCTGGTGACCGGA | + |
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Preference number: 6 (lower is better) Translates to: SWPPPPPPPPPP*LRDDELLLVTG Trigger: TCCGGTCACCAGCAGCAGCTCGTCGTCCCTGAGTCACGGCGGCGGCGGCGGCGGCGGCGGGGGAGGCCAGGA 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS GCA 72 bp | CACCGAGTGGAAGTTCTGCTGCTGGCCCGGGTAGCCTaGGGCCGCCGCCGCCGCCGCCGCGCTCGCCAAGTG | + |
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Preference number: 6 (lower is better) Translates to: HRVEVLLLARVA*GRRRRRRARQV Trigger: CACTTGGCGAGCGCGGCGGCGGCGGCGGCGGCCGCAGGCTACCCGGGCCAGCAGCAGAACTTCCACTCGGTG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS GCA 72 bp | GGGGAGAAGGCCGGGCCCGGCCGCGGCAGACCGCCTTaGAGGAACTCGCGGCGCAGCTTCCAGGCGCAAACG | + |
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Preference number: 6 (lower is better) Translates to: GEKAGPGRGRPP*RNSRRSFQAQT Trigger: CGTTTGCGCCTGGAAGCTGCGCCGCGAGTTCCTGCAAGGCGGTCTGCCGCGGCCGGGCCCGGCCTTCTCCCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS CCA 72 bp | ACAGGCTGCTGCTGCTGCTGTCGGGGCTCTCGATCTTaGGCACCGCGGCGGCGCTGCCGCTGCCCAGGGCGG | + |
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Preference number: 6 (lower is better) Translates to: TGCCCCCRGSRS*APRRRCRCPGR Trigger: CCGCCCTGGGCAGCGGCAGCGCCGCCGCGGTGCCCAAGATCGAGAGCCCCGACAGCAGCAGCAGCAGCCTGT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS TCA 72 bp | CCAGGTCTCCGCCCGCCTGGTTCAGGTACCACGAGGTaGGGCGGCCTTGGTGGGCCGCAGGGTGGTGGCCGG | + |
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Preference number: 6 (lower is better) Translates to: PGLRPPGSGTTR*GGLGGPQGGGR Trigger: CCGGCCACCACCCTGCGGCCCACCAAGGCCGCCTCACCTCGTGGTACCTGAACCAGGCGGGCGGAGACCTGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS GCA 72 bp | GCCATGCCGCCCGGGTACTGCTCGGCGTGCGCAGGGTaGGAGTACACGCTCATGGGGGCCGGCATGGCGGTG | + |
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Preference number: 6 (lower is better) Translates to: AMPPGYCSACAG*EYTLMGAGMAV Trigger: CACCGCCATGCCGGCCCCCATGAGCGTGTACTCGCACCCTGCGCACGCCGAGCAGTACCCGGGCGGCATGGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS CCA 72 bp | GCCTGGTTCAGGTACCACGAGGTGAGGCGGCCTTGGTaGGCCGCAGGGTGGTGGCCGGCCTCCTGGCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: AWFRYHEVRRPW*AAGWWPASWPP Trigger: GGGAGGCCAGGAGGCCGGCCACCACCCTGCGGCCCACCAAGGCCGCCTCACCTCGTGGTACCTGAACCAGGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS CAA 72 bp | AGGGGAGAAGGCCGGGCCCGGCCGCGGCAGACCGCCTaGCAGGAACTCGCGGCGCAGCTTCCAGGCGCAAAC | + |
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Preference number: 6 (lower is better) Translates to: RGEGRARPRQTA*QELAAQLPGAN Trigger: GTTTGCGCCTGGAAGCTGCGCCGCGAGTTCCTGCAAGGCGGTCTGCCGCGGCCGGGCCCGGCCTTCTCCCCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS CAA 90 bp | GTCGCTGCGAGGGGAGAAGGCCGGGCCCGGCCGCGGCAGACCGCCTaGCAGGAACTCGCGGCGCAGCTTCCAGGCGCAAACGGGGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: VAARGEGRARPRQTA*QELAAQLPGANGGK Trigger: CTTTCCCCCGTTTGCGCCTGGAAGCTGCGCCGCGAGTTCCTGCAAGGCGGTCTGCCGCGGCCGGGCCCGGCCTTCTCCCCTCGCAGCGAC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS TCA 72 bp | GCTGGGGCGGCGAGGGGCACGTACCGTTCTCGGTCTTaGTGTCCTGGATGCGCACGGGCGGCGGCTGCGGAC | + |
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Preference number: 6 (lower is better) Translates to: AGAARGTYRSRS*CPGCARAAAAD Trigger: GTCCGCAGCCGCCGCCCGTGCGCATCCAGGACATCAAGACCGAGAACGGTACGTGCCCCTCGCCGCCCCAGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS GCA 72 bp | GCCAGAAGGCCGGAGCTGAGCTCCGCGGCCGCGCTCTaGGGCGACCCCCGCAGCGACGTCATGATGTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: ARRPELSSAAAL*GDPRSDVMMLS Trigger: GGACAACATCATGACGTCGCTGCGGGGGTCGCCGCAGAGCGCGGCCGCGGAGCTCAGCTCCGGCCTTCTGGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS CAA 72 bp | GGCTGGGGCGGCGAGGGGCACGTACCGTTCTCGGTCTaGATGTCCTGGATGCGCACGGGCGGCGGCTGCGGA | + |
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Preference number: 6 (lower is better) Translates to: GWGGEGHVPFSV*MSWMRTGGGCG Trigger: TCCGCAGCCGCCGCCCGTGCGCATCCAGGACATCAAGACCGAGAACGGTACGTGCCCCTCGCCGCCCCAGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS TCA 72 bp | CGCCGCCGTGACTCAGGGACGACGAGCTGCTGCTGGTaGCCGGAGGCAGAGAGTAGTCGGGCAGGGGGTCGT | + |
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Preference number: 6 (lower is better) Translates to: RRRDSGTTSCCW*PEAESSRAGGR Trigger: ACGACCCCCTGCCCGACTACTCTCTGCCTCCGGTCACCAGCAGCAGCTCGTCGTCCCTGAGTCACGGCGGCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS TCA 72 bp | CCCGTTCACTGGAGAGTTGTTCAAGCCGATCCTCTGTaGCTCGAACATCTCCCGCACCGAGTGGAAGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: PVHWRVVQADPL*LEHLPHRVEVL Trigger: CAGAACTTCCACTCGGTGCGGGAGATGTTCGAGTCACAGAGGATCGGCTTGAACAACTCTCCAGTGAACGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS CAA 90 bp | AGCTCCGGACGTGCGGTACAGAGACTGGCTGGAAGGGAAGGCCATTaGACAGCTACTATTCCCGTTCACTGGAGAGTTGTTCAAGCCGAT | + |
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Preference number: 6 (lower is better) Translates to: SSGRAVQRLAGREGH*TATIPVHWRVVQAD Trigger: ATCGGCTTGAACAACTCTCCAGTGAACGGGAATAGTAGCTGTCAAATGGCCTTCCCTTCCAGCCAGTCTCTGTACCGCACGTCCGGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS TCA 72 bp | GTGCGGTACAGAGACTGGCTGGAAGGGAAGGCCATTTaGCAGCTACTATTCCCGTTCACTGGAGAGTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: VRYRDWLEGKAI*QLLFPFTGELF Trigger: GAACAACTCTCCAGTGAACGGGAATAGTAGCTGTCAAATGGCCTTCCCTTCCAGCCAGTCTCTGTACCGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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| CDS GCA 72 bp | AAAACTTGCTACAGTCGTAGACGAAAGCTCCGGACGTaGGGTACAGAGACTGGCTGGAAGGGAAGGCCATTT | + |
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Preference number: 6 (lower is better) Translates to: KTCYSRRRKLRT*GTETGWKGRPF Trigger: AAATGGCCTTCCCTTCCAGCCAGTCTCTGTACCGCACGTCCGGAGCTTTCGTCTACGACTGTAGCAAGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645831.2 |
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