Pregenerated sensors for FOXB2 (Homo sapiens)
Ensembl gene IDs: ENSG00000204612Ensembl transcript IDs: ENST00000376708.1
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGCGCCGGAGGCTGCTGCGAAGCCGCGGGGACAGTGAGCCCCGGCTaGAGCGCGGACACGGGCGGCAGCGCAGGCGTGGGCTTGATGGGC | + |
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Preference number: 5 (lower is better) Translates to: GAGGCCEAAGTVSPG*SADTGGSAGVGLMG Trigger: GCCCATCAAGCCCACGCCTGCGCTGCCGCCCGTGTCCGCGCTGCAGCCGGGGCTCACTGTCCCCGCGGCTTCGCAGCAGCCTCCGGCGCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376708.1 |
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| CDS GCA 90 bp | GCTGCGGCGGCCGCGGCGGCGGCCACCGAATCCATGACGCCAACGTaGGGCCACACGGAGCTGACGACGTTGCCAAGCTGGCCGGGCACG | + |
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Preference number: 5 (lower is better) Translates to: AAAAAAAATESMTPT*GHTELTTLPSWPGT Trigger: CGTGCCCGGCCAGCTTGGCAACGTCGTCAGCTCCGTGTGGCCGCACGTTGGCGTCATGGATTCGGTGGCCGCCGCCGCGGCCGCCGCAGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376708.1 |
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| CDS CCA 90 bp | GATGGGGGTGAAGGTGCCCTCCCGGACCGGCGCCCGGCGCGCTCTTaGTGCTTCCCGCGTGCAAGTGAGTATGGTCGGCGCGCAGCACCT | + |
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Preference number: 5 (lower is better) Translates to: DGGEGALPDRRPARS*CFPRASEYGRRAAP Trigger: AGGTGCTGCGCGCCGACCATACTCACTTGCACGCGGGAAGCACCAAGAGCGCGCCGGGCGCCGGTCCGGGAGGGCACCTTCACCCCCATC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376708.1 |
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| CDS TCA 90 bp | CGACGTTGCCAAGCTGGCCGGGCACGGGGTAGCCCAGGTGGTGCATaGCGGACGCCAAGGGCAGCCCTCCAGCCTGCAGCACGCCCTTGT | + |
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Preference number: 5 (lower is better) Translates to: RRCQAGRARGSPGGA*RTPRAALQPAARPC Trigger: ACAAGGGCGTGCTGCAGGCTGGAGGGCTGCCCTTGGCGTCCGTCATGCACCACCTGGGCTACCCCGTGCCCGGCCAGCTTGGCAACGTCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376708.1 |
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| CDS TCA 90 bp | CCGGCATGGCAGGCAGGCTCTGGCTTGCCGAGTGGCACAGGGACTTaGCCGGGACCCCGAAGGCCCCATACTCCGGGCCTACAGGGACTC | + |
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Preference number: 5 (lower is better) Translates to: PAWQAGSGLPSGTGT*PGPRRPHTPGLQGL Trigger: GAGTCCCTGTAGGCCCGGAGTATGGGGCCTTCGGGGTCCCGGTCAAGTCCCTGTGCCACTCGGCAAGCCAGAGCCTGCCTGCCATGCCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376708.1 |
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| CDS GCA 72 bp | GGCTGCTGCGAAGCCGCGGGGACAGTGAGCCCCGGCTaGAGCGCGGACACGGGCGGCAGCGCAGGCGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GCCEAAGTVSPG*SADTGGSAGVG Trigger: GCCCACGCCTGCGCTGCCGCCCGTGTCCGCGCTGCAGCCGGGGCTCACTGTCCCCGCGGCTTCGCAGCAGCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376708.1 |
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| CDS CCA 72 bp | AGGCAACGGGCGAGGCCGCGGCCGCGGAGCACACGGTaGATGGCGCCGGAGGCTGCTGCGAAGCCGCGGGGA | + |
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Preference number: 6 (lower is better) Translates to: RQRARPRPRSTR*MAPEAAAKPRG Trigger: TCCCCGCGGCTTCGCAGCAGCCTCCGGCGCCATCCACCGTGTGCTCCGCGGCCGCGGCCTCGCCCGTTGCCT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376708.1 |
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| CDS GCA 72 bp | CCGCCGCCGCCGCCACGGCCGCCGCCTCCTGCATCTTaGCGGGGTGAGACGGCTGCTGAGGCTGCGACTGCT | + |
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Preference number: 6 (lower is better) Translates to: PPPPPRPPPPAS*RGETAAEAATA Trigger: AGCAGTCGCAGCCTCAGCAGCCGTCTCACCCCGGCAAGATGCAGGAGGCGGCGGCCGTGGCGGCGGCGGCGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376708.1 |
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| CDS GCA 72 bp | GGTGCCCTCCCGGACCGGCGCCCGGCGCGCTCTTGGTaGTTCCCGCGTGCAAGTGAGTATGGTCGGCGCGCA | + |
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Preference number: 6 (lower is better) Translates to: GALPDRRPARSW*FPRASEYGRRA Trigger: TGCGCGCCGACCATACTCACTTGCACGCGGGAAGCACCAAGAGCGCGCCGGGCGCCGGTCCGGGAGGGCACC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376708.1 |
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| CDS CCA 72 bp | GAAGGTGCCCTCCCGGACCGGCGCCCGGCGCGCTCTTaGTGCTTCCCGCGTGCAAGTGAGTATGGTCGGCGC | + |
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Preference number: 6 (lower is better) Translates to: EGALPDRRPARS*CFPRASEYGRR Trigger: GCGCCGACCATACTCACTTGCACGCGGGAAGCACCAAGAGCGCGCCGGGCGCCGGTCCGGGAGGGCACCTTC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376708.1 |
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| CDS TCA 72 bp | CAAGCTGGCCGGGCACGGGGTAGCCCAGGTGGTGCATaGCGGACGCCAAGGGCAGCCCTCCAGCCTGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: QAGRARGSPGGA*RTPRAALQPAA Trigger: TGCTGCAGGCTGGAGGGCTGCCCTTGGCGTCCGTCATGCACCACCTGGGCTACCCCGTGCCCGGCCAGCTTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376708.1 |
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| CDS GCA 72 bp | GCCGCGGCGGCGGCCACCGAATCCATGACGCCAACGTaGGGCCACACGGAGCTGACGACGTTGCCAAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: AAAAATESMTPT*GHTELTTLPSW Trigger: CCAGCTTGGCAACGTCGTCAGCTCCGTGTGGCCGCACGTTGGCGTCATGGATTCGGTGGCCGCCGCCGCGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376708.1 |
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| CDS CAA 72 bp | GCAGGCAGGCTCTGGCTTGCCGAGTGGCACAGGGACTaGACCGGGACCCCGAAGGCCCCATACTCCGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: AGRLWLAEWHRD*TGTPKAPYSGP Trigger: AGGCCCGGAGTATGGGGCCTTCGGGGTCCCGGTCAAGTCCCTGTGCCACTCGGCAAGCCAGAGCCTGCCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376708.1 |
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| CDS CAA 90 bp | ACCGGCATGGCAGGCAGGCTCTGGCTTGCCGAGTGGCACAGGGACTaGACCGGGACCCCGAAGGCCCCATACTCCGGGCCTACAGGGACT | + |
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Preference number: 6 (lower is better) Translates to: TGMAGRLWLAEWHRD*TGTPKAPYSGPTGT Trigger: AGTCCCTGTAGGCCCGGAGTATGGGGCCTTCGGGGTCCCGGTCAAGTCCCTGTGCCACTCGGCAAGCCAGAGCCTGCCTGCCATGCCGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376708.1 |
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| CDS TCA 72 bp | GCGCCCGGCGCGCTCTTGGTGCTTCCCGCGTGCAAGTaGGTATGGTCGGCGCGCAGCACCTTGAAGCGCTTG | + |
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Preference number: 6 (lower is better) Translates to: APGALLVLPACK*VWSARSTLKRL Trigger: CAAGCGCTTCAAGGTGCTGCGCGCCGACCATACTCACTTGCACGCGGGAAGCACCAAGAGCGCGCCGGGCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376708.1 |
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| CDS TCA 72 bp | CAGGCAGGCTCTGGCTTGCCGAGTGGCACAGGGACTTaGCCGGGACCCCGAAGGCCCCATACTCCGGGCCTA | + |
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Preference number: 6 (lower is better) Translates to: QAGSGLPSGTGT*PGPRRPHTPGL Trigger: TAGGCCCGGAGTATGGGGCCTTCGGGGTCCCGGTCAAGTCCCTGTGCCACTCGGCAAGCCAGAGCCTGCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376708.1 |
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| CDS CAA 72 bp | CGGGAGGTGCGGAGGCGGCTGCGGAGCAGTAGGCGGTaGCTGATGGAAATAGTGTACCATGTGCGGCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: REVRRRLRSSRR*LMEIVYHVRRR Trigger: CCGCCGCCGCACATGGTACACTATTTCCATCAGCAACCGCCTACTGCTCCGCAGCCGCCTCCGCACCTCCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376708.1 |
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