Pregenerated sensors for FOXA3 (Homo sapiens)
Ensembl gene IDs: ENSG00000170608Ensembl transcript IDs: ENST00000302177.3
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTCCATCCCCTACCCAACCCATGCCAGAGAGAATGGTGACGACATaGCCAACACGGGGCTGCAGCAGCCATCATGGCACATGGTGGCCC | + |
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Preference number: 1 (lower is better) Translates to: PPSPTQPMPERMVTT*PTRGCSSHHGTWWP Trigger: GGGCCACCATGTGCCATGATGGCTGCTGCAGCCCCGTGTTGGCCATGTCGTCACCATTCTCTCTGGCATGGGTTGGGTAGGGGATGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| 3UTR GCA 90 bp | CAACCCATGCCAGAGAGAATGGTGACGACATGGCCAACACGGGGCTaGAGCAGCCATCATGGCACATGGTGGCCCACTGACGTTGTCACC | + |
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Preference number: 1 (lower is better) Translates to: QPMPERMVTTWPTRG*SSHHGTWWPTDVVT Trigger: GGTGACAACGTCAGTGGGCCACCATGTGCCATGATGGCTGCTGCAGCCCCGTGTTGGCCATGTCGTCACCATTCTCTCTGGCATGGGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| 3UTR CCA 90 bp | GGACAAGTGAAGTGTCACCAGAAGGATCAGGCCCCAAGAGCTTCGTaGTGTGAGCTCCAGCCATACCCACCACCATGTTCCCAACCCCTG | + |
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Preference number: 1 (lower is better) Translates to: GQVKCHQKDQAPRAS*CELQPYPPPCSQPL Trigger: CAGGGGTTGGGAACATGGTGGTGGGTATGGCTGGAGCTCACACCACGAAGCTCTTGGGGCCTGATCCTTCTGGTGACACTTCACTTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| 3UTR TCA 90 bp | GCCAACACGGGGCTGCAGCAGCCATCATGGCACATGGTGGCCCACTaGCGTTGTCACCTACCCAGTATGATGTCCATCAAAGCACCCAAT | + |
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Preference number: 1 (lower is better) Translates to: ANTGLQQPSWHMVAH*RCHLPSMMSIKAPN Trigger: ATTGGGTGCTTTGATGGACATCATACTGGGTAGGTGACAACGTCAGTGGGCCACCATGTGCCATGATGGCTGCTGCAGCCCCGTGTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| 3UTR GCA 90 bp | ACCATCACACCCAAAGGGCCAACCGAGATGGTGGCCATCAAACCATaGAGTGGATTAGCCAATAACATCCATCAATGTAGCAGTCCTCAC | + |
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Preference number: 1 (lower is better) Translates to: TITPKGPTEMVAIKP*SGLANNIHQCSSPH Trigger: GTGAGGACTGCTACATTGATGGATGTTATTGGCTAATCCACTGCATGGTTTGATGGCCACCATCTCGGTTGGCCCTTTGGGTGTGATGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| 3UTR CCA 90 bp | AGTGGGCCACCAAAATGTATCCATGGTGGTTATCACAGTACCCCGTaGATCAACACCATGCCCACTGAGACAGCAGTCATCACAGTAAGT | + |
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Preference number: 1 (lower is better) Translates to: SGPPKCIHGGYHSTP*INTMPTETAVITVS Trigger: ACTTACTGTGATGACTGCTGTCTCAGTGGGCATGGTGTTGATCCACGGGGTACTGTGATAACCACCATGGATACATTTTGGTGGCCCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| 3UTR CCA 90 bp | TTAGCCAATAACATCCATCAATGTAGCAGTCCTCACAGTACCCAGTaGGCCACCAAAATGTATCCATGGTGGTTATCACAGTACCCCGTG | + |
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Preference number: 1 (lower is better) Translates to: LANNIHQCSSPHSTQ*ATKMYPWWLSQYPV Trigger: CACGGGGTACTGTGATAACCACCATGGATACATTTTGGTGGCCCACTGGGTACTGTGAGGACTGCTACATTGATGGATGTTATTGGCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| 3UTR-3UTR CCA 90 bp | GACGACATGGCCAACACGGGGCTGCAGCAGCCATCATGGCACATGGTGGCCCACGCCCCAAGAGCTTCGTaGTGTGAGCTCCAGCCATAC | + |
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Preference number: 2 (lower is better) Translates to: DDMANTGLQQPSWHMVAHAPRAS*CELQPY Trigger: GTATGGCTGGAGCTCACACCACGAAGCTCTTGGGGC...GTGGGCCACCATGTGCCATGATGGCTGCTGCAGCCCCGTGTTGGCCATGTCGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| 3UTR-3UTR TCA 90 bp | ATCCCCTACCCAACCCATGCCAGAGAGAATGGTGACGACATGGCCAACACGGGGAAGAGCTTCGTGGTGTaGGCTCCAGCCATACCCACC | + |
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Preference number: 2 (lower is better) Translates to: IPYPTHARENGDDMANTGKSFVV*APAIPT Trigger: GGTGGGTATGGCTGGAGCTCACACCACGAAGCTCTT...CCCCGTGTTGGCCATGTCGTCACCATTCTCTCTGGCATGGGTTGGGTAGGGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| 3UTR-3UTR TCA 90 bp | CCATCCCCTACCCAACCCATGCCAGAGAGAATGGTGACGACATGGCCAACACGGCAACACCATGCCCACTaGGACAGCAGTCATCACAGT | + |
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Preference number: 2 (lower is better) Translates to: PSPTQPMPERMVTTWPTRQHHAH*DSSHHS Trigger: ACTGTGATGACTGCTGTCTCAGTGGGCATGGTGTTG...CCGTGTTGGCCATGTCGTCACCATTCTCTCTGGCATGGGTTGGGTAGGGGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| 3UTR-3UTR TCA 90 bp | GAGAATGGTGACGACATGGCCAACACGGGGCTGCAGCAGCCATCATGGCACATGGTCACCTACCCAGTATaGTGTCCATCAAAGCACCCA | + |
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Preference number: 2 (lower is better) Translates to: ENGDDMANTGLQQPSWHMVTYPV*CPSKHP Trigger: TGGGTGCTTTGATGGACATCATACTGGGTAGGTGAC...CATGTGCCATGATGGCTGCTGCAGCCCCGTGTTGGCCATGTCGTCACCATTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| 3UTR-3UTR CCA 90 bp | ACGACATGGCCAACACGGGGCTGCAGCAGCCATCATGGCACATGGTGGCCCACTACCAAAATGTATCCATaGTGGTTATCACAGTACCCC | + |
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Preference number: 2 (lower is better) Translates to: TTWPTRGCSSHHGTWWPTTKMYP*WLSQYP Trigger: GGGGTACTGTGATAACCACCATGGATACATTTTGGT...AGTGGGCCACCATGTGCCATGATGGCTGCTGCAGCCCCGTGTTGGCCATGTCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| 3UTR-3UTR CCA 90 bp | CCACACCCTAACCAGCCTTTTCTGGTTTCTCCTGGACCAGAGTTGGGGGAAAGGAAGGGCCAACCGAGATaGTGGCCATCAAACCATGCA | + |
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Preference number: 2 (lower is better) Translates to: PHPNQPFLVSPGPELGERKGQPR*WPSNHA Trigger: TGCATGGTTTGATGGCCACCATCTCGGTTGGCCCTT...CCTTTCCCCCAACTCTGGTCCAGGAGAAACCAGAAAAGGCTGGTTAGGGTGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| 3UTR-3UTR CCA 90 bp | GCTGCAGCAGCCATCATGGCACATGGTGGCCCACTGACGTTGTCACCTACCCAGAAAATGTATCCATGGTaGTTATCACAGTACCCCGTG | + |
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Preference number: 2 (lower is better) Translates to: AAAAIMAHGGPLTLSPTQKMYPW*LSQYPV Trigger: CACGGGGTACTGTGATAACCACCATGGATACATTTT...CTGGGTAGGTGACAACGTCAGTGGGCCACCATGTGCCATGATGGCTGCTGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| 3UTR-3UTR CCA 90 bp | AGGTGTTACACAGAATGGTGGCCAACTTGGCACCTACTGTGCCAAGTACACCAACCTCACAGTACCCAGTaGGCCACCAAAATGTATCCA | + |
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Preference number: 2 (lower is better) Translates to: RCYTEWWPTWHLLCQVHQPHSTQ*ATKMYP Trigger: TGGATACATTTTGGTGGCCCACTGGGTACTGTGAGG...TTGGTGTACTTGGCACAGTAGGTGCCAAGTTGGCCACCATTCTGTGTAACACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| 3UTR-3UTR TCA 90 bp | CCAGAGTTGGGGGAAAGGGTGGGCTTCAGAGAAAACCAAGGAGTATTCTCACCTCAAAGAAGATGTCACTaGAATGCTATCACCATCACA | + |
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Preference number: 2 (lower is better) Translates to: PELGERVGFRENQGVFSPQRRCH*NAITIT Trigger: TGTGATGGTGATAGCATTTCAGTGACATCTTCTTTG...AGGTGAGAATACTCCTTGGTTTTCTCTGAAGCCCACCCTTTCCCCCAACTCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| 3UTR GCA 72 bp | CCAGAGAGAATGGTGACGACATGGCCAACACGGGGCTaGAGCAGCCATCATGGCACATGGTGGCCCACTGAC | + |
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Preference number: 3 (lower is better) Translates to: PERMVTTWPTRG*SSHHGTWWPTD Trigger: GTCAGTGGGCCACCATGTGCCATGATGGCTGCTGCAGCCCCGTGTTGGCCATGTCGTCACCATTCTCTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| 3UTR CCA 72 bp | CCTACCCAACCCATGCCAGAGAGAATGGTGACGACATaGCCAACACGGGGCTGCAGCAGCCATCATGGCACA | + |
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Preference number: 3 (lower is better) Translates to: PTQPMPERMVTT*PTRGCSSHHGT Trigger: TGTGCCATGATGGCTGCTGCAGCCCCGTGTTGGCCATGTCGTCACCATTCTCTCTGGCATGGGTTGGGTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| 3UTR TCA 72 bp | TCACCAGAAGGATCAGGCCCCAAGAGCTTCGTGGTGTaGGCTCCAGCCATACCCACCACCATGTTCCCAACC | + |
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Preference number: 3 (lower is better) Translates to: SPEGSGPKSFVV*APAIPTTMFPT Trigger: GGTTGGGAACATGGTGGTGGGTATGGCTGGAGCTCACACCACGAAGCTCTTGGGGCCTGATCCTTCTGGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| 3UTR CCA 72 bp | AAGTGTCACCAGAAGGATCAGGCCCCAAGAGCTTCGTaGTGTGAGCTCCAGCCATACCCACCACCATGTTCC | + |
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Preference number: 3 (lower is better) Translates to: KCHQKDQAPRAS*CELQPYPPPCS Trigger: GGAACATGGTGGTGGGTATGGCTGGAGCTCACACCACGAAGCTCTTGGGGCCTGATCCTTCTGGTGACACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| 3UTR TCA 72 bp | GGGCTGCAGCAGCCATCATGGCACATGGTGGCCCACTaGCGTTGTCACCTACCCAGTATGATGTCCATCAAA | + |
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Preference number: 3 (lower is better) Translates to: GLQQPSWHMVAH*RCHLPSMMSIK Trigger: TTTGATGGACATCATACTGGGTAGGTGACAACGTCAGTGGGCCACCATGTGCCATGATGGCTGCTGCAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| 3UTR GCA 72 bp | CCCAAAGGGCCAACCGAGATGGTGGCCATCAAACCATaGAGTGGATTAGCCAATAACATCCATCAATGTAGC | + |
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Preference number: 3 (lower is better) Translates to: PKGPTEMVAIKP*SGLANNIHQCS Trigger: GCTACATTGATGGATGTTATTGGCTAATCCACTGCATGGTTTGATGGCCACCATCTCGGTTGGCCCTTTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| 3UTR CCA 72 bp | CCAAAATGTATCCATGGTGGTTATCACAGTACCCCGTaGATCAACACCATGCCCACTGAGACAGCAGTCATC | + |
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Preference number: 3 (lower is better) Translates to: PKCIHGGYHSTP*INTMPTETAVI Trigger: GATGACTGCTGTCTCAGTGGGCATGGTGTTGATCCACGGGGTACTGTGATAACCACCATGGATACATTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| 3UTR CCA 72 bp | AACATCCATCAATGTAGCAGTCCTCACAGTACCCAGTaGGCCACCAAAATGTATCCATGGTGGTTATCACAG | + |
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Preference number: 3 (lower is better) Translates to: NIHQCSSPHSTQ*ATKMYPWWLSQ Trigger: CTGTGATAACCACCATGGATACATTTTGGTGGCCCACTGGGTACTGTGAGGACTGCTACATTGATGGATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR CCA 90 bp | GACGACATGGCCAACACGGGGCTGCAGCAGCCATCATGGCACATGGTGGCCCACGCTGGAGGCGGGGGCTaGGGCGGGGAGGTGACTGTG | + |
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Preference number: 4 (lower is better) Translates to: DDMANTGLQQPSWHMVAHAGGGG*GGEVTV Trigger: CACAGTCACCTCCCCGCCCCAGCCCCCGCCTCCAGC...GTGGGCCACCATGTGCCATGATGGCTGCTGCAGCCCCGTGTTGGCCATGTCGTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR CCA 90 bp | ACGACATGGCCAACACGGGGCTGCAGCAGCCATCATGGCACATGGTGGCCCACTGCTGACACCCAGGCCTaGGAAAGTGGGCCCCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: TTWPTRGCSSHHGTWWPTADTQA*ESGPQG Trigger: CCCCTGGGGCCCACTTTCCCAGGCCTGGGTGTCAGC...AGTGGGCCACCATGTGCCATGATGGCTGCTGCAGCCCCGTGTTGGCCATGTCGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR CCA 90 bp | CACCAGAAGGATCAGGCCCCAAGAGCTTCGTGGTGTGAGCTCCAGCCATACCCAGGGAACGGAGCGCTCTaGATCTCTCAGCGGGCACGG | + |
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Preference number: 4 (lower is better) Translates to: HQKDQAPRASWCELQPYPGNGAL*ISQRAR Trigger: CCGTGCCCGCTGAGAGATCCAGAGCGCTCCGTTCCC...TGGGTATGGCTGGAGCTCACACCACGAAGCTCTTGGGGCCTGATCCTTCTGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR TCA 90 bp | CACGGGGCTGCAGCAGCCATCATGGCACATGGTGGCCCACTGACGTTGTCACCTGGAGCTCCAGGCCAGTaGAATAGGGTGTGGAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: HGAAAAIMAHGGPLTLSPGAPGQ*NRVWRK Trigger: CTTCCTCCACACCCTATTTCACTGGCCTGGAGCTCC...AGGTGACAACGTCAGTGGGCCACCATGTGCCATGATGGCTGCTGCAGCCCCGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR TCA 90 bp | ACGACATGGCCAACACGGGGCTGCAGCAGCCATCATGGCACATGGTGGCCCACTAAGAGCTTCGTGGTGTaGGCTCCAGCCATACCCACC | + |
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Preference number: 4 (lower is better) Translates to: TTWPTRGCSSHHGTWWPTKSFVV*APAIPT Trigger: GGTGGGTATGGCTGGAGCTCACACCACGAAGCTCTT...AGTGGGCCACCATGTGCCATGATGGCTGCTGCAGCCCCGTGTTGGCCATGTCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR GCA 90 bp | AATGGGACAAGTGAAGTGTCACCAGAAGGATCAGGCCCCAAGAGCTTCGTGGTGCGGTGGCTTGGCGTGTaGCAGGGGCCGCCGATACCC | + |
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Preference number: 4 (lower is better) Translates to: NGTSEVSPEGSGPKSFVVRWLGV*QGPPIP Trigger: GGGTATCGGCGGCCCCTGGCACACGCCAAGCCACCG...CACCACGAAGCTCTTGGGGCCTGATCCTTCTGGTGACACTTCACTTGTCCCATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR CCA 90 bp | CGGGGCTGCAGCAGCCATCATGGCACATGGTGGCCCACTGACGTTGTCACCTACCACTCGGCCAGGTCATaGGCCTCCATCTTCACTGAG | + |
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Preference number: 4 (lower is better) Translates to: RGCSSHHGTWWPTDVVTYHSARS*ASIFTE Trigger: CTCAGTGAAGATGGAGGCCCATGACCTGGCCGAGTG...GTAGGTGACAACGTCAGTGGGCCACCATGTGCCATGATGGCTGCTGCAGCCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR CCA 90 bp | ACCATCACACCCAAAGGGCCAACCGAGATGGTGGCCATCAAACCATGCAGTGGACGTTCCTGGTGGTGGTaGCAGCCCCGCTGCCCCCTT | + |
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Preference number: 4 (lower is better) Translates to: TITPKGPTEMVAIKPCSGRSWWW*QPRCPL Trigger: AAGGGGGCAGCGGGGCTGCCACCACCACCAGGAACG...TCCACTGCATGGTTTGATGGCCACCATCTCGGTTGGCCCTTTGGGTGTGATGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR GCA 90 bp | GAGAATGGTGACGACATGGCCAACACGGGGCTGCAGCAGCCATCATGGCACATGTCAAGGTCAGCATCTTaGCCGGCGCCTGCTGGATGG | + |
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Preference number: 4 (lower is better) Translates to: ENGDDMANTGLQQPSWHMSRSAS*PAPAGW Trigger: CCATCCAGCAGGCGCCGGGCAAGATGCTGACCTTGA...CATGTGCCATGATGGCTGCTGCAGCCCCGTGTTGGCCATGTCGTCACCATTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR CCA 90 bp | GTACCCAGTGGGCCACCAAAATGTATCCATGGTGGTTATCACAGTACCCCGTGGCTGTCCCGTTCCTGGTaGTGGTGGCAGCCCCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: VPSGPPKCIHGGYHSTPWLSRSW*WWQPRC Trigger: GCAGCGGGGCTGCCACCACCACCAGGAACGGGACAG...CCACGGGGTACTGTGATAACCACCATGGATACATTTTGGTGGCCCACTGGGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR CCA 90 bp | GAGAATGGTGACGACATGGCCAACACGGGGCTGCAGCAGCCATCATGGCACATGCAGCTTCAGCTCCCCTaGGAGCTCCAGGCCAGTGAA | + |
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Preference number: 4 (lower is better) Translates to: ENGDDMANTGLQQPSWHMQLQLP*ELQASE Trigger: TTCACTGGCCTGGAGCTCCCAGGGGAGCTGAAGCTG...CATGTGCCATGATGGCTGCTGCAGCCCCGTGTTGGCCATGTCGTCACCATTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR CCA 90 bp | CACGGGGCTGCAGCAGCCATCATGGCACATGGTGGCCCACTGACGTTGTCACCTCATCATGGCACATGGTaGCCCACTGACGTTGTCACC | + |
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Preference number: 4 (lower is better) Translates to: HGAAAAIMAHGGPLTLSPHHGTW*PTDVVT Trigger: GGTGACAACGTCAGTGGGCCACCATGTGCCATGATG...AGGTGACAACGTCAGTGGGCCACCATGTGCCATGATGGCTGCTGCAGCCCCGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR GCA 90 bp | CCAGTGGGCCACCAAAATGTATCCATGGTGGTTATCACAGTACCCCGTGGATCAGGCATCTCCTTCCCGTaGACCAGCCCAGGACCCGGG | + |
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Preference number: 4 (lower is better) Translates to: PVGHQNVSMVVITVPRGSGISFP*TSPGPG Trigger: CCCGGGTCCTGGGCTGGTGCACGGGAAGGAGATGCC...TGATCCACGGGGTACTGTGATAACCACCATGGATACATTTTGGTGGCCCACTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR GCA 90 bp | ACGACATGGCCAACACGGGGCTGCAGCAGCCATCATGGCACATGGTGGCCCACTCGTGGATCAACACCATaGCCACTGAGACAGCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: TTWPTRGCSSHHGTWWPTRGSTP*PLRQQS Trigger: TGACTGCTGTCTCAGTGGGCATGGTGTTGATCCACG...AGTGGGCCACCATGTGCCATGATGGCTGCTGCAGCCCCGTGTTGGCCATGTCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR CCA 90 bp | CCTACCCAACCCATGCCAGAGAGAATGGTGACGACATGGCCAACACGGGGCTGCGATATAGGAATACGGTaGCTTGGCGTGTGCCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: PTQPMPERMVTTWPTRGCDIGIR*LGVCQG Trigger: CCCCTGGCACACGCCAAGCCACCGTATTCCTATATC...GCAGCCCCGTGTTGGCCATGTCGTCACCATTCTCTCTGGCATGGGTTGGGTAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR CCA 90 bp | AGGTGTTACACAGAATGGTGGCCAACTTGGCACCTACTGTGCCAAGTACACCAATCCCGTTCCTGGTGGTaGTGGCAGCCCCGCTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: RCYTEWWPTWHLLCQVHQSRSWW*WQPRCP Trigger: GGGGCAGCGGGGCTGCCACCACCACCAGGAACGGGA...TTGGTGTACTTGGCACAGTAGGTGCCAAGTTGGCCACCATTCTGTGTAACACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR CCA 90 bp | AATGGGACAAGTGAAGTGTCACCAGAAGGATCAGGCCCCAAGAGCTTCGTGGTGACATCTTCCCCGCCCTaGGCCTCAGGCTCAGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: NGTSEVSPEGSGPKSFVVTSSPP*ASGSGA Trigger: AGCCCCTGAGCCTGAGGCCCAGGGCGGGGAAGATGT...CACCACGAAGCTCTTGGGGCCTGATCCTTCTGGTGACACTTCACTTGTCCCATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR TCA 90 bp | AGGTGTTACACAGAATGGTGGCCAACTTGGCACCTACTGTGCCAAGTACACCAAGGCCTCCATCTTCACTaGGCCCAGCATCCCCCGGGC | + |
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Preference number: 4 (lower is better) Translates to: RCYTEWWPTWHLLCQVHQGLHLH*AQHPPG Trigger: GCCCGGGGGATGCTGGGCTCAGTGAAGATGGAGGCC...TTGGTGTACTTGGCACAGTAGGTGCCAAGTTGGCCACCATTCTGTGTAACACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR GCA 90 bp | CACGGGGCTGCAGCAGCCATCATGGCACATGGTGGCCCACTGACGTTGTCACCTCAACCCCTGCTAGGATaGATTAAGCAAAGAGCGGGA | + |
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Preference number: 4 (lower is better) Translates to: HGAAAAIMAHGGPLTLSPQPLLG*IKQRAG Trigger: TCCCGCTCTTTGCTTAATGCATCCTAGCAGGGGTTG...AGGTGACAACGTCAGTGGGCCACCATGTGCCATGATGGCTGCTGCAGCCCCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR CCA 90 bp | ATGCCAGAGAGAATGGTGACGACATGGCCAACACGGGGCTGCAGCAGCCATCATAGAATGGTGACGACATaGCCAACACGGGGCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: MPERMVTTWPTRGCSSHHRMVTT*PTRGCS Trigger: GCTGCAGCCCCGTGTTGGCCATGTCGTCACCATTCT...ATGATGGCTGCTGCAGCCCCGTGTTGGCCATGTCGTCACCATTCTCTCTGGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR TCA 90 bp | ATGCCAGAGAGAATGGTGACGACATGGCCAACACGGGGCTGCAGCAGCCATCATTGGAGAAAGGGTGGTTaGAGTTGTAGGGCGCGTCCA | + |
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Preference number: 4 (lower is better) Translates to: MPERMVTTWPTRGCSSHHWRKGG*SCRARP Trigger: TGGACGCGCCCTACAACTTCAACCACCCTTTCTCCA...ATGATGGCTGCTGCAGCCCCGTGTTGGCCATGTCGTCACCATTCTCTCTGGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR CCA 90 bp | AAGATGTCACTGAAATGCTATCACCATCACACCCAAAGGGCCAACCGAGATGGTACCCTGTCCCGTTCCTaGTGGTGGTGGCAGCCCCGC | + |
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Preference number: 4 (lower is better) Translates to: KMSLKCYHHHTQRANRDGTLSRS*WWWQPR Trigger: GCGGGGCTGCCACCACCACCAGGAACGGGACAGGGT...ACCATCTCGGTTGGCCCTTTGGGTGTGATGGTGATAGCATTTCAGTGACATCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR CCA 90 bp | AATAACATCCATCAATGTAGCAGTCCTCACAGTACCCAGTGGGCCACCAAAATGTGGCCGCGGGGGTGGTaGTCGAGGCAGCAGACCCTG | + |
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Preference number: 4 (lower is better) Translates to: NNIHQCSSPHSTQWATKMWPRGW*SRQQTL Trigger: CAGGGTCTGCTGCCTCGACCACCACCCCCGCGGCCA...CATTTTGGTGGCCCACTGGGTACTGTGAGGACTGCTACATTGATGGATGTTATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR CCA 90 bp | GAGAATGGTGACGACATGGCCAACACGGGGCTGCAGCAGCCATCATGGCACATGAAGGGCCAACCGAGATaGTGGCCATCAAACCATGCA | + |
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Preference number: 4 (lower is better) Translates to: ENGDDMANTGLQQPSWHMKGQPR*WPSNHA Trigger: TGCATGGTTTGATGGCCACCATCTCGGTTGGCCCTT...CATGTGCCATGATGGCTGCTGCAGCCCCGTGTTGGCCATGTCGTCACCATTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR TCA 90 bp | AATGGGACAAGTGAAGTGTCACCAGAAGGATCAGGCCCCAAGAGCTTCGTGGTGTGCCAGAGAGAATGGTaGCGACATGGCCAACACGGG | + |
|
Preference number: 4 (lower is better) Translates to: NGTSEVSPEGSGPKSFVVCQREW*RHGQHG Trigger: CCCGTGTTGGCCATGTCGTCACCATTCTCTCTGGCA...CACCACGAAGCTCTTGGGGCCTGATCCTTCTGGTGACACTTCACTTGTCCCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR CCA 90 bp | ACATCCATCAATGTAGCAGTCCTCACAGTACCCAGTGGGCCACCAAAATGTATCGGCCATGGTGGGCACTaGGGTCACCGGCGAGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TSINVAVLTVPSGPPKCIGHGGH*GHRRVD Trigger: GTCTACTCGCCGGTGACCCCAGTGCCCACCATGGCC...GATACATTTTGGTGGCCCACTGGGTACTGTGAGGACTGCTACATTGATGGATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR CCA 90 bp | AAGATGTCACTGAAATGCTATCACCATCACACCCAAAGGGCCAACCGAGATGGTAGGAATACGGTGGCTTaGCGTGTGCCAGGGGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: KMSLKCYHHHTQRANRDGRNTVA*RVPGAA Trigger: GGCGGCCCCTGGCACACGCCAAGCCACCGTATTCCT...ACCATCTCGGTTGGCCCTTTGGGTGTGATGGTGATAGCATTTCAGTGACATCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR CCA 90 bp | ACCATCACACCCAAAGGGCCAACCGAGATGGTGGCCATCAAACCATGCAGTGGAACCCCACGTCCAGTTTaGGAGGTGCTGGTGTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TITPKGPTEMVAIKPCSGTPRPV*EVLVSV Trigger: AACAGACACCAGCACCTCCCAAACTGGACGTGGGGT...TCCACTGCATGGTTTGATGGCCACCATCTCGGTTGGCCCTTTGGGTGTGATGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR CCA 90 bp | ACCAGAAGGATCAGGCCCCAAGAGCTTCGTGGTGTGAGCTCCAGCCATACCCACCCTCACAGTACCCAGTaGGCCACCAAAATGTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: TRRIRPQELRGVSSSHTHPHSTQ*ATKMYP Trigger: TGGATACATTTTGGTGGCCCACTGGGTACTGTGAGG...GTGGGTATGGCTGGAGCTCACACCACGAAGCTCTTGGGGCCTGATCCTTCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR TCA 90 bp | TCAGTAGAAATTCCCCACACCCTAACCAGCCTTTTCTGGTTTCTCCTGGACCAGCCTTCTCCTCCAGCTTaGAGCGTTTCTGGCGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SVEIPHTLTSLFWFLLDQPSPPA*SVSGGA Trigger: TGCGCCGCCAGAAACGCTTCAAGCTGGAGGAGAAGG...CTGGTCCAGGAGAAACCAGAAAAGGCTGGTTAGGGTGTGGGGAATTTCTACTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR TCA 90 bp | CCAGTGGGCCACCAAAATGTATCCATGGTGGTTATCACAGTACCCCGTGGATCACACATGGTGGCCCACTaGCGTTGTCACCTACCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PVGHQNVSMVVITVPRGSHMVAH*RCHLPS Trigger: ACTGGGTAGGTGACAACGTCAGTGGGCCACCATGTG...TGATCCACGGGGTACTGTGATAACCACCATGGATACATTTTGGTGGCCCACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR CCA 90 bp | CACCAGAAGGATCAGGCCCCAAGAGCTTCGTGGTGTGAGCTCCAGCCATACCCATTTTCTGGTTTCTCCTaGACCAGAGTTGGGGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HQKDQAPRASWCELQPYPFSGFS*TRVGGK Trigger: CTTTCCCCCAACTCTGGTCCAGGAGAAACCAGAAAA...TGGGTATGGCTGGAGCTCACACCACGAAGCTCTTGGGGCCTGATCCTTCTGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR CCA 90 bp | CTCACAGTACCCAGTGGGCCACCAAAATGTATCCATGGTGGTTATCACAGTACCCTCCTGGACCAGAGTTaGGGGAAAGGGTGGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LTVPSGPPKCIHGGYHSTLLDQS*GKGWAS Trigger: TGAAGCCCACCCTTTCCCCCAACTCTGGTCCAGGAG...GGTACTGTGATAACCACCATGGATACATTTTGGTGGCCCACTGGGTACTGTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR TCA 90 bp | AGTACCCAGTGGGCCACCAAAATGTATCCATGGTGGTTATCACAGTACCCCGTGCAACACCATGCCCACTaGGACAGCAGTCATCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: STQWATKMYPWWLSQYPVQHHAH*DSSHHS Trigger: ACTGTGATGACTGCTGTCTCAGTGGGCATGGTGTTG...CACGGGGTACTGTGATAACCACCATGGATACATTTTGGTGGCCCACTGGGTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR TCA 90 bp | CACAGTACCCCGTGGATCAACACCATGCCCACTGAGACAGCAGTCATCACAGTAGTCACCTACCCAGTATaGTGTCCATCAAAGCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: HSTPWINTMPTETAVITVVTYPV*CPSKHP Trigger: TGGGTGCTTTGATGGACATCATACTGGGTAGGTGAC...TACTGTGATGACTGCTGTCTCAGTGGGCATGGTGTTGATCCACGGGGTACTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR GCA 90 bp | ATGCCAGAGAGAATGGTGACGACATGGCCAACACGGGGCTGCAGCAGCCATCATGTGGCCATCAAACCATaGAGTGGATTAGCCAATAAC | + |
|
Preference number: 4 (lower is better) Translates to: MPERMVTTWPTRGCSSHHVAIKP*SGLANN Trigger: GTTATTGGCTAATCCACTGCATGGTTTGATGGCCAC...ATGATGGCTGCTGCAGCCCCGTGTTGGCCATGTCGTCACCATTCTCTCTGGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR CCA 90 bp | CCACACCCTAACCAGCCTTTTCTGGTTTCTCCTGGACCAGAGTTGGGGGAAAGGAGGTGTTACACAGAATaGTGGCCAACTTGGCACCTA | + |
|
Preference number: 4 (lower is better) Translates to: PHPNQPFLVSPGPELGERRCYTE*WPTWHL Trigger: TAGGTGCCAAGTTGGCCACCATTCTGTGTAACACCT...CCTTTCCCCCAACTCTGGTCCAGGAGAAACCAGAAAAGGCTGGTTAGGGTGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR CCA 90 bp | AGGTGTTACACAGAATGGTGGCCAACTTGGCACCTACTGTGCCAAGTACACCAAAGCCATCATGGCACATaGTGGCCCACTGACGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RCYTEWWPTWHLLCQVHQSHHGT*WPTDVV Trigger: GACAACGTCAGTGGGCCACCATGTGCCATGATGGCT...TTGGTGTACTTGGCACAGTAGGTGCCAAGTTGGCCACCATTCTGTGTAACACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR CCA 90 bp | AATAACATCCATCAATGTAGCAGTCCTCACAGTACCCAGTGGGCCACCAAAATGACATGTTCCCTGAGCTaGGGTGTAGGGCCCAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: NNIHQCSSPHSTQWATKMTCSLS*GVGPSR Trigger: CCTACTGGGCCCTACACCCCAGCTCAGGGAACATGT...CATTTTGGTGGCCCACTGGGTACTGTGAGGACTGCTACATTGATGGATGTTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR CCA 90 bp | AATAACATCCATCAATGTAGCAGTCCTCACAGTACCCAGTGGGCCACCAAAATGGCCCCAAGAGCTTCGTaGTGTGAGCTCCAGCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: NNIHQCSSPHSTQWATKMAPRAS*CELQPY Trigger: GTATGGCTGGAGCTCACACCACGAAGCTCTTGGGGC...CATTTTGGTGGCCCACTGGGTACTGTGAGGACTGCTACATTGATGGATGTTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR CCA 90 bp | ATGTCACTGAAATGCTATCACCATCACACCCAAAGGGCCAACCGAGATGGTGGCTATCACAGTACCCCGTaGATCAACACCATGCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: MSLKCYHHHTQRANRDGGYHSTP*INTMPT Trigger: AGTGGGCATGGTGTTGATCCACGGGGTACTGTGATA...GCCACCATCTCGGTTGGCCCTTTGGGTGTGATGGTGATAGCATTTCAGTGACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR CCA 90 bp | AAGATGTCACTGAAATGCTATCACCATCACACCCAAAGGGCCAACCGAGATGGTGGCCAACCGAGATGGTaGCCATCAAACCATGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KMSLKCYHHHTQRANRDGGQPRW*PSNHAV Trigger: CACTGCATGGTTTGATGGCCACCATCTCGGTTGGCC...ACCATCTCGGTTGGCCCTTTGGGTGTGATGGTGATAGCATTTCAGTGACATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR CCA 90 bp | ACCATCACACCCAAAGGGCCAACCGAGATGGTGGCCATCAAACCATGCAGTGGAAAAATGTATCCATGGTaGTTATCACAGTACCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: TITPKGPTEMVAIKPCSGKMYPW*LSQYPV Trigger: CACGGGGTACTGTGATAACCACCATGGATACATTTT...TCCACTGCATGGTTTGATGGCCACCATCTCGGTTGGCCCTTTGGGTGTGATGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR CCA 90 bp | CCACACCCTAACCAGCCTTTTCTGGTTTCTCCTGGACCAGAGTTGGGGGAAAGGACCAAAATGTATCCATaGTGGTTATCACAGTACCCC | + |
|
Preference number: 4 (lower is better) Translates to: PHPNQPFLVSPGPELGERTKMYP*WLSQYP Trigger: GGGGTACTGTGATAACCACCATGGATACATTTTGGT...CCTTTCCCCCAACTCTGGTCCAGGAGAAACCAGAAAAGGCTGGTTAGGGTGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR CCA 90 bp | AGTTGGGGGAAAGGGTGGGCTTCAGAGAAAACCAAGGAGTATTCTCACCTCCATGAATGGTGGCCAACTTaGCACCTACTGTGCCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SWGKGWASEKTKEYSHLHEWWPT*HLLCQV Trigger: TACTTGGCACAGTAGGTGCCAAGTTGGCCACCATTC...ATGGAGGTGAGAATACTCCTTGGTTTTCTCTGAAGCCCACCCTTTCCCCCAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR CCA 90 bp | AGTACCCAGTGGGCCACCAAAATGTATCCATGGTGGTTATCACAGTACCCCGTGTGTTACACAGAATGGTaGCCAACTTGGCACCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: STQWATKMYPWWLSQYPVCYTEW*PTWHLL Trigger: CAGTAGGTGCCAAGTTGGCCACCATTCTGTGTAACA...CACGGGGTACTGTGATAACCACCATGGATACATTTTGGTGGCCCACTGGGTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR CCA 90 bp | ACATCCATCAATGTAGCAGTCCTCACAGTACCCAGTGGGCCACCAAAATGTATCAGTTGGGGGAAAGGGTaGGCTTCAGAGAAAACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TSINVAVLTVPSGPPKCISWGKG*ASEKTK Trigger: CTTGGTTTTCTCTGAAGCCCACCCTTTCCCCCAACT...GATACATTTTGGTGGCCCACTGGGTACTGTGAGGACTGCTACATTGATGGATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR GCA 90 bp | CACAGTACCCCGTGGATCAACACCATGCCCACTGAGACAGCAGTCATCACAGTAAAGATGTCACTGAAATaGTATCACCATCACACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HSTPWINTMPTETAVITVKMSLK*YHHHTQ Trigger: TTGGGTGTGATGGTGATAGCATTTCAGTGACATCTT...TACTGTGATGACTGCTGTCTCAGTGGGCATGGTGTTGATCCACGGGGTACTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR TCA 90 bp | AGGTGTTACACAGAATGGTGGCCAACTTGGCACCTACTGTGCCAAGTACACCAACAAAGAAGATGTCACTaGAATGCTATCACCATCACA | + |
|
Preference number: 4 (lower is better) Translates to: RCYTEWWPTWHLLCQVHQQRRCH*NAITIT Trigger: TGTGATGGTGATAGCATTTCAGTGACATCTTCTTTG...TTGGTGTACTTGGCACAGTAGGTGCCAAGTTGGCCACCATTCTGTGTAACACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS TCA 90 bp | CCCTGGGAGCTCCAGGCCAGTGAAATAGGGTGTGGAGGAAGCGGGTaGGCCACAGTCCAGAGCCCCCACATCTTCCCCGCCCTGGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PWELQASEIGCGGSG*ATVQSPHIFPALGL Trigger: GAGGCCCAGGGCGGGGAAGATGTGGGGGCTCTGGACTGTGGCTCACCCGCTTCCTCCACACCCTATTTCACTGGCCTGGAGCTCCCAGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS TCA 90 bp | TGTAGGGCGCGTCCAGCTTCAGCTCCCCTGGGAGCTCCAGGCCAGTaGAATAGGGTGTGGAGGAAGCGGGTGAGCCACAGTCCAGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: CRARPASAPLGAPGQ*NRVWRKRVSHSPEP Trigger: GGGCTCTGGACTGTGGCTCACCCGCTTCCTCCACACCCTATTTCACTGGCCTGGAGCTCCCAGGGGAGCTGAAGCTGGACGCGCCCTACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR CAA 90 bp | ACGACATGGCCAACACGGGGCTGCAGCAGCCATCATGGCACATGGTGGCCCACTAACCCCACGTCCAGTTaGGGAGGTGCTGGTGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TTWPTRGCSSHHGTWWPTNPTSS*GGAGVC Trigger: ACAGACACCAGCACCTCCCAAACTGGACGTGGGGTT...AGTGGGCCACCATGTGCCATGATGGCTGCTGCAGCCCCGTGTTGGCCATGTCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR CAA 90 bp | ACGACATGGCCAACACGGGGCTGCAGCAGCCATCATGGCACATGGTGGCCCACTAGAATGGTGGCCAACTaGGCACCTACTGTGCCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: TTWPTRGCSSHHGTWWPTRMVAN*APTVPS Trigger: ACTTGGCACAGTAGGTGCCAAGTTGGCCACCATTCT...AGTGGGCCACCATGTGCCATGATGGCTGCTGCAGCCCCGTGTTGGCCATGTCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS TCA 90 bp | AGTGAAGTGTCACCAGAAGGATCAGGCCCCAAGAGCTTCGTGGTGTaGGCTCCAGCCATACCCACCACCATGTTCCCAACCCCTGCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: SEVSPEGSGPKSFVV*APAIPTTMFPTPAR Trigger: CCTAGCAGGGGTTGGGAACATGGTGGTGGGTATGGCTGGAGCTCACACCACGAAGCTCTTGGGGCCTGATCCTTCTGGTGACACTTCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR CAA 90 bp | CACCATCACACCCAAAGGGCCAACCGAGATGGTGGCCATCAAACCATGCAGTGGGGTGGCCCACTGACGTaGTCACCTACCCAGTATGAT | + |
|
Preference number: 5 (lower is better) Translates to: HHHTQRANRDGGHQTMQWGGPLT*SPTQYD Trigger: ATCATACTGGGTAGGTGACAACGTCAGTGGGCCACC...CCACTGCATGGTTTGATGGCCACCATCTCGGTTGGCCCTTTGGGTGTGATGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS GCA 90 bp | GAGCTCCAGCCATACCCACCACCATGTTCCCAACCCCTGCTAGGATaGATTAAGCAAAGAGCGGGAATAGAGGCCCTGGTAGTAGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: ELQPYPPPCSQPLLG*IKQRAGIEALVVDS Trigger: GGAGTCTACTACCAGGGCCTCTATTCCCGCTCTTTGCTTAATGCATCCTAGCAGGGGTTGGGAACATGGTGGTGGGTATGGCTGGAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR CAA 90 bp | ACTGAGACAGCAGTCATCACAGTAAGTAATAGACCCACCCAGATGTTAACCAATACCTTCTCCTCCAGCTaGAAGCGTTTCTGGCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: TETAVITVSNRPTQMLTNTFSSS*KRFWRR Trigger: GCGCCGCCAGAAACGCTTCAAGCTGGAGGAGAAGGT...ATTGGTTAACATCTGGGTGGGTCTATTACTTACTGTGATGACTGCTGTCTCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS-3UTR CAA 90 bp | CCAGAGTTGGGGGAAAGGGTGGGCTTCAGAGAAAACCAAGGAGTATTCTCACCTTCTGACATTAGGTTGTaGATGGAGAAAGGGTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PELGERVGFRENQGVFSPSDIRL*MEKGWL Trigger: CAACCACCCTTTCTCCATCAACAACCTAATGTCAGA...AGGTGAGAATACTCCTTGGTTTTCTCTGAAGCCCACCCTTTCCCCCAACTCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS TCA 72 bp | GCTCCACTCGGCCAGGTCATGGGCCTCCATCTTCACTaGGCCCAGCATCCCCCGGGCTTACGCCCCCACCCG | + |
|
Preference number: 6 (lower is better) Translates to: APLGQVMGLHLH*AQHPPGLRPHP Trigger: CGGGTGGGGGCGTAAGCCCGGGGGATGCTGGGCTCAGTGAAGATGGAGGCCCATGACCTGGCCGAGTGGAGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS TCA 72 bp | CTCCAGGCCAGTGAAATAGGGTGTGGAGGAAGCGGGTaGGCCACAGTCCAGAGCCCCCACATCTTCCCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: LQASEIGCGGSG*ATVQSPHIFPA Trigger: GGCGGGGAAGATGTGGGGGCTCTGGACTGTGGCTCACCCGCTTCCTCCACACCCTATTTCACTGGCCTGGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS CCA 72 bp | GTTGAAGTTGTAGGGCGCGTCCAGCTTCAGCTCCCCTaGGAGCTCCAGGCCAGTGAAATAGGGTGTGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: VEVVGRVQLQLP*ELQASEIGCGG Trigger: TCCTCCACACCCTATTTCACTGGCCTGGAGCTCCCAGGGGAGCTGAAGCTGGACGCGCCCTACAACTTCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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| CDS GCA 72 bp | CCATACCCACCACCATGTTCCCAACCCCTGCTAGGATaGATTAAGCAAAGAGCGGGAATAGAGGCCCTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: PYPPPCSQPLLG*IKQRAGIEALV Trigger: TACCAGGGCCTCTATTCCCGCTCTTTGCTTAATGCATCCTAGCAGGGGTTGGGAACATGGTGGTGGGTATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302177.3 |
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