Pregenerated sensors for FOSL1 (Homo sapiens)
Ensembl gene IDs: ENSG00000175592Ensembl transcript IDs: ENST00000312562.7, ENST00000448083.6, ENST00000531493.5, ENST00000532401.1, ENST00000534222.1
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | TCTGTAGAGCTAAGGCTGGGACCTAGGGCTCCAAATACTCTCCCATaGGCCTCTGGGTCCAGTGAGGCACTCAGGCCACAGCTTCAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: SVELRLGPRAPNTLP*ASGSSEALRPQLQA Trigger: GGCTTGAAGCTGTGGCCTGAGTGCCTCACTGGACCCAGAGGCCAATGGGAGAGTATTTGGAGCCCTAGGTCCCAGCCTTAGCTCTACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000312562.7 ENST00000448083.6 |
||
| 3UTR-3UTR TCA 90 bp | TCATGCAGTGAGTCTGTAGAGCTAAGGCTGGGACCTAGGGCTCCAAATACTCTCGGCCTCTGGGTCCAGTaGGGCACTCAGGCCACAGCT | + |
|
Preference number: 2 (lower is better) Translates to: SCSESVELRLGPRAPNTLGLWVQ*GTQATA Trigger: AGCTGTGGCCTGAGTGCCTCACTGGACCCAGAGGCC...GAGAGTATTTGGAGCCCTAGGTCCCAGCCTTAGCTCTACAGACTCACTGCATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000312562.7 ENST00000448083.6 |
||
| 3UTR-3UTR CCA 90 bp | GAGCTAAGGCTGGGACCTAGGGCTCCAAATACTCTCCCATTGGCCTCTGGGTCCAAGGGGAGGAGACATTaGCTAGGGTGGCATCTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: ELRLGPRAPNTLPLASGSKGRRH*LGWHLQ Trigger: CTGCAGATGCCACCCTAGCCAATGTCTCCTCCCCTT...GGACCCAGAGGCCAATGGGAGAGTATTTGGAGCCCTAGGTCCCAGCCTTAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000312562.7 ENST00000448083.6 |
||
| 3UTR-3UTR TCA 90 bp | AGGCCGAGCGGATGTAGCCCCACTTGTCAGATAAGACAAAGTCCAAAAATATCAGGCCTCTGGGTCCAGTaGGGCACTCAGGCCACAGCT | + |
|
Preference number: 2 (lower is better) Translates to: RPSGCSPTCQIRQSPKISGLWVQ*GTQATA Trigger: AGCTGTGGCCTGAGTGCCTCACTGGACCCAGAGGCC...TGATATTTTTGGACTTTGTCTTATCTGACAAGTGGGGCTACATCCGCTCGGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000312562.7 ENST00000448083.6 |
||
| 3UTR-3UTR CCA 90 bp | AGGTCATGCAGTGAGTCTGTAGAGCTAAGGCTGGGACCTAGGGCTCCAAATACTAAGGGGAGGAGACATTaGCTAGGGTGGCATCTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: RSCSESVELRLGPRAPNTKGRRH*LGWHLQ Trigger: CTGCAGATGCCACCCTAGCCAATGTCTCCTCCCCTT...AGTATTTGGAGCCCTAGGTCCCAGCCTTAGCTCTACAGACTCACTGCATGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000312562.7 ENST00000448083.6 |
||
| 3UTR-3UTR CCA 90 bp | AGGCCGAGCGGATGTAGCCCCACTTGTCAGATAAGACAAAGTCCAAAAATATCACAAATACTCTCCCATTaGCCTCTGGGTCCAGTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: RPSGCSPTCQIRQSPKISQILSH*PLGPVR Trigger: CCTCACTGGACCCAGAGGCCAATGGGAGAGTATTTG...TGATATTTTTGGACTTTGTCTTATCTGACAAGTGGGGCTACATCCGCTCGGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000312562.7 ENST00000448083.6 |
||
| 3UTR-3UTR TCA 90 bp | AGGCCGAGCGGATGTAGCCCCACTTGTCAGATAAGACAAAGTCCAAAAATATCATCCAAGGTCATGCAGTaGGTCTGTAGAGCTAAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: RPSGCSPTCQIRQSPKISSKVMQ*VCRAKA Trigger: AGCCTTAGCTCTACAGACTCACTGCATGACCTTGGA...TGATATTTTTGGACTTTGTCTTATCTGACAAGTGGGGCTACATCCGCTCGGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000312562.7 ENST00000448083.6 |
||
| 3UTR-3UTR CAA 90 bp | TCATGCAGTGAGTCTGTAGAGCTAAGGCTGGGACCTAGGGCTCCAAATACTCTCGAAGGGGAGGAGACATaGGCTAGGGTGGCATCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: SCSESVELRLGPRAPNTLEGEET*ARVASA Trigger: TGCAGATGCCACCCTAGCCAATGTCTCCTCCCCTTC...GAGAGTATTTGGAGCCCTAGGTCCCAGCCTTAGCTCTACAGACTCACTGCATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000312562.7 ENST00000448083.6 |
||
| 3UTR-3UTR CAA 90 bp | AGGTCATGCAGTGAGTCTGTAGAGCTAAGGCTGGGACCTAGGGCTCCAAATACTGAAGGGGAGGAGACATaGGCTAGGGTGGCATCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: RSCSESVELRLGPRAPNTEGEET*ARVASA Trigger: TGCAGATGCCACCCTAGCCAATGTCTCCTCCCCTTC...AGTATTTGGAGCCCTAGGTCCCAGCCTTAGCTCTACAGACTCACTGCATGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000312562.7 ENST00000448083.6 |
||
| 3UTR-3UTR CAA 90 bp | TCATGCAGTGAGTCTGTAGAGCTAAGGCTGGGACCTAGGGCTCCAAATACTCTCTGTCAGGAGATAGGGTaGGGTGGATCACAGGAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SCSESVELRLGPRAPNTLCQEIG*GGSQEE Trigger: CTCTTCCTGTGATCCACCCAACCCTATCTCCTGACA...GAGAGTATTTGGAGCCCTAGGTCCCAGCCTTAGCTCTACAGACTCACTGCATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000312562.7 ENST00000448083.6 |
||
| 3UTR-3UTR CAA 90 bp | AGGCCGAGCGGATGTAGCCCCACTTGTCAGATAAGACAAAGTCCAAAAATATCACCAAATACTCTCCCATaGGCCTCTGGGTCCAGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: RPSGCSPTCQIRQSPKISPNTLP*ASGSSE Trigger: CTCACTGGACCCAGAGGCCAATGGGAGAGTATTTGG...TGATATTTTTGGACTTTGTCTTATCTGACAAGTGGGGCTACATCCGCTCGGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000312562.7 ENST00000448083.6 |
||
| 3UTR-3UTR CAA 90 bp | AGGCCGAGCGGATGTAGCCCCACTTGTCAGATAAGACAAAGTCCAAAAATATCATGTCAGGAGATAGGGTaGGGTGGATCACAGGAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: RPSGCSPTCQIRQSPKISCQEIG*GGSQEE Trigger: CTCTTCCTGTGATCCACCCAACCCTATCTCCTGACA...TGATATTTTTGGACTTTGTCTTATCTGACAAGTGGGGCTACATCCGCTCGGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000312562.7 ENST00000448083.6 |
||
| CDS-3UTR GCA 90 bp | GAGCTAAGGCTGGGACCTAGGGCTCCAAATACTCTCCCATTGGCCTCTGGGTCCCGGGGCTGGCGGCTCTaGGGGGTACACGGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ELRLGPRAPNTLPLASGSRGWRL*GVHGCW Trigger: CCAGCAGCCGTGTACCCCGCAGAGCCGCCAGCCCCG...GGACCCAGAGGCCAATGGGAGAGTATTTGGAGCCCTAGGTCCCAGCCTTAGCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000312562.7 ENST00000448083.6 |
||
| CDS-3UTR GCA 90 bp | GAGCTAAGGCTGGGACCTAGGGCTCCAAATACTCTCCCATTGGCCTCTGGGTCCCGAAGTCTCGGAACATaGCCGGGGCTGGCGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ELRLGPRAPNTLPLASGSRSLGT*PGLAAL Trigger: CAGAGCCGCCAGCCCCGGGCATGTTCCGAGACTTCG...GGACCCAGAGGCCAATGGGAGAGTATTTGGAGCCCTAGGTCCCAGCCTTAGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000312562.7 ENST00000448083.6 |
||
| 3UTR CAA 72 bp | CTAAGGCTGGGACCTAGGGCTCCAAATACTCTCCCATaGGCCTCTGGGTCCAGTGAGGCACTCAGGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LRLGPRAPNTLP*ASGSSEALRPQ Trigger: CTGTGGCCTGAGTGCCTCACTGGACCCAGAGGCCAATGGGAGAGTATTTGGAGCCCTAGGTCCCAGCCTTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000312562.7 ENST00000448083.6 |
||
| CDS-3UTR CCA 90 bp | TCATGCAGTGAGTCTGTAGAGCTAAGGCTGGGACCTAGGGCTCCAAATACTCTCGAACATGCCCGGGGCTaGCGGCTCTGCGGGGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: SCSESVELRLGPRAPNTLEHARG*RLCGVH Trigger: GTGTACCCCGCAGAGCCGCCAGCCCCGGGCATGTTC...GAGAGTATTTGGAGCCCTAGGTCCCAGCCTTAGCTCTACAGACTCACTGCATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312562.7 ENST00000448083.6 |
||
| CDS-3UTR TCA 90 bp | AGGTCATGCAGTGAGTCTGTAGAGCTAAGGCTGGGACCTAGGGCTCCAAATACTGGCCTCTGGGTCCAGTaGGGCACTCAGGCCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RSCSESVELRLGPRAPNTGLWVQ*GTQATA Trigger: AGCTGTGGCCTGAGTGCCTCACTGGACCCAGAGGCC...AGTATTTGGAGCCCTAGGTCCCAGCCTTAGCTCTACAGACTCACTGCATGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000312562.7 ENST00000448083.6 |
||
| CDS-3UTR GCA 90 bp | AGGCCGAGCGGATGTAGCCCCACTTGTCAGATAAGACAAAGTCCAAAAATATCACGGGGCTGGCGGCTCTaGGGGGTACACGGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RPSGCSPTCQIRQSPKISRGWRL*GVHGCW Trigger: CCAGCAGCCGTGTACCCCGCAGAGCCGCCAGCCCCG...TGATATTTTTGGACTTTGTCTTATCTGACAAGTGGGGCTACATCCGCTCGGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000312562.7 ENST00000448083.6 |
||
| CDS-3UTR CCA 90 bp | TCATGCAGTGAGTCTGTAGAGCTAAGGCTGGGACCTAGGGCTCCAAATACTCTCAGGTGGAACTTCTGCTaGGCTGCCTGCGCTGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SCSESVELRLGPRAPNTLRWNFC*AACAAA Trigger: GGCCGCAGCGCAGGCAGCCCAGCAGAAGTTCCACCT...GAGAGTATTTGGAGCCCTAGGTCCCAGCCTTAGCTCTACAGACTCACTGCATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312562.7 |
||
| CDS-3UTR TCA 90 bp | AGGCCGAGCGGATGTAGCCCCACTTGTCAGATAAGACAAAGTCCAAAAATATCAACGGCTGCTGGGTTCTaGCTCACCCGCGCCGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RPSGCSPTCQIRQSPKISTAAGF*LTRAVR Trigger: CCGCACGGCGCGGGTGAGTCAGAACCCAGCAGCCGT...TGATATTTTTGGACTTTGTCTTATCTGACAAGTGGGGCTACATCCGCTCGGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000448083.6 |
||
| CDS-3UTR GCA 90 bp | TCATGCAGTGAGTCTGTAGAGCTAAGGCTGGGACCTAGGGCTCCAAATACTCTCACCAGGTGGAACTTCTaGTGGGCTGCCTGCGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: SCSESVELRLGPRAPNTLTRWNF*WAACAA Trigger: CGCAGCGCAGGCAGCCCAGCAGAAGTTCCACCTGGT...GAGAGTATTTGGAGCCCTAGGTCCCAGCCTTAGCTCTACAGACTCACTGCATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312562.7 |
||
| CDS-3UTR GCA 90 bp | AGGTCATGCAGTGAGTCTGTAGAGCTAAGGCTGGGACCTAGGGCTCCAAATACTTGCGGGGTACACGGCTaGTGGGTTCTGACTCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: RSCSESVELRLGPRAPNTCGVHG*WVLTHP Trigger: CGGGTGAGTCAGAACCCAGCAGCCGTGTACCCCGCA...AGTATTTGGAGCCCTAGGTCCCAGCCTTAGCTCTACAGACTCACTGCATGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448083.6 |
||
| CDS-3UTR TCA 90 bp | GAGCTAAGGCTGGGACCTAGGGCTCCAAATACTCTCCCATTGGCCTCTGGGTCCTCCAAGGTCATGCAGTaGGTCTGTAGAGCTAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ELRLGPRAPNTLPLASGSSKVMQ*VCRAKA Trigger: AGCCTTAGCTCTACAGACTCACTGCATGACCTTGGA...GGACCCAGAGGCCAATGGGAGAGTATTTGGAGCCCTAGGTCCCAGCCTTAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000312562.7 ENST00000448083.6 |
||
| CDS-3UTR GCA 90 bp | GAGCTAAGGCTGGGACCTAGGGCTCCAAATACTCTCCCATTGGCCTCTGGGTCCGACTCACCCGCGCCGTaGGGAGTCTTTTCTTTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: ELRLGPRAPNTLPLASGSDSPAP*GVFSFY Trigger: ATAAAAAGAAAAGACTCCGCACGGCGCGGGTGAGTC...GGACCCAGAGGCCAATGGGAGAGTATTTGGAGCCCTAGGTCCCAGCCTTAGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000448083.6 |
||
| CDS-3UTR GCA 90 bp | TCATGCAGTGAGTCTGTAGAGCTAAGGCTGGGACCTAGGGCTCCAAATACTCTCAGTTTGTCAGTCTCCTaGTGGGCTGCCTGCGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: SCSESVELRLGPRAPNTLSLSVS*WAACAA Trigger: CGCAGCGCAGGCAGCCCAGCAGGAGACTGACAAACT...GAGAGTATTTGGAGCCCTAGGTCCCAGCCTTAGCTCTACAGACTCACTGCATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448083.6 |
||
| CDS-3UTR CCA 90 bp | AGGCCGAGCGGATGTAGCCCCACTTGTCAGATAAGACAAAGTCCAAAAATATCAGAACATGCCCGGGGCTaGCGGCTCTGCGGGGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: RPSGCSPTCQIRQSPKISEHARG*RLCGVH Trigger: GTGTACCCCGCAGAGCCGCCAGCCCCGGGCATGTTC...TGATATTTTTGGACTTTGTCTTATCTGACAAGTGGGGCTACATCCGCTCGGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000312562.7 ENST00000448083.6 |
||
| CDS-3UTR TCA 90 bp | TCATGCAGTGAGTCTGTAGAGCTAAGGCTGGGACCTAGGGCTCCAAATACTCTCCCTCTTCCTCCGGGCTaGTCTGTTCACAAGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SCSESVELRLGPRAPNTLPLPPG*SVHKAF Trigger: GAAGGCCTTGTGAACAGATCAGCCCGGAGGAAGAGG...GAGAGTATTTGGAGCCCTAGGTCCCAGCCTTAGCTCTACAGACTCACTGCATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312562.7 |
||
| CDS-3UTR CCA 90 bp | AGGCCGAGCGGATGTAGCCCCACTTGTCAGATAAGACAAAGTCCAAAAATATCAGGGGTACACGGCTGCTaGGTTCTGACTCACCCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: RPSGCSPTCQIRQSPKISGVHGC*VLTHPR Trigger: GCGCGGGTGAGTCAGAACCCAGCAGCCGTGTACCCC...TGATATTTTTGGACTTTGTCTTATCTGACAAGTGGGGCTACATCCGCTCGGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000448083.6 |
||
| CDS-3UTR GCA 90 bp | AGGTCATGCAGTGAGTCTGTAGAGCTAAGGCTGGGACCTAGGGCTCCAAATACTCTCCTTCCGGGATTTTaGAGATGGGTCGGTGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RSCSESVELRLGPRAPNTLLPGF*RWVGGL Trigger: AAGCCCACCGACCCATCTGCAAAATCCCGGAAGGAG...AGTATTTGGAGCCCTAGGTCCCAGCCTTAGCTCTACAGACTCACTGCATGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000312562.7 ENST00000448083.6 |
||
| CDS-3UTR CCA 90 bp | TCATGCAGTGAGTCTGTAGAGCTAAGGCTGGGACCTAGGGCTCCAAATACTCTCCAAATACTCTCCCATTaGCCTCTGGGTCCAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SCSESVELRLGPRAPNTLQILSH*PLGPVR Trigger: CCTCACTGGACCCAGAGGCCAATGGGAGAGTATTTG...GAGAGTATTTGGAGCCCTAGGTCCCAGCCTTAGCTCTACAGACTCACTGCATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000312562.7 ENST00000448083.6 |
||
| CDS-3UTR TCA 90 bp | TCATGCAGTGAGTCTGTAGAGCTAAGGCTGGGACCTAGGGCTCCAAATACTCTCTCCAAGGTCATGCAGTaGGTCTGTAGAGCTAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SCSESVELRLGPRAPNTLSKVMQ*VCRAKA Trigger: AGCCTTAGCTCTACAGACTCACTGCATGACCTTGGA...GAGAGTATTTGGAGCCCTAGGTCCCAGCCTTAGCTCTACAGACTCACTGCATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000312562.7 ENST00000448083.6 |
||
| CDS-3UTR CCA 90 bp | AGGCCGAGCGGATGTAGCCCCACTTGTCAGATAAGACAAAGTCCAAAAATATCAAAGGGGAGGAGACATTaGCTAGGGTGGCATCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RPSGCSPTCQIRQSPKISKGRRH*LGWHLQ Trigger: CTGCAGATGCCACCCTAGCCAATGTCTCCTCCCCTT...TGATATTTTTGGACTTTGTCTTATCTGACAAGTGGGGCTACATCCGCTCGGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000312562.7 ENST00000448083.6 |
||
| CDS-3UTR CAA 90 bp | GAGCTAAGGCTGGGACCTAGGGCTCCAAATACTCTCCCATTGGCCTCTGGGTCCGAAGGGGAGGAGACATaGGCTAGGGTGGCATCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ELRLGPRAPNTLPLASGSEGEET*ARVASA Trigger: TGCAGATGCCACCCTAGCCAATGTCTCCTCCCCTTC...GGACCCAGAGGCCAATGGGAGAGTATTTGGAGCCCTAGGTCCCAGCCTTAGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000312562.7 ENST00000448083.6 |
||
| CDS-3UTR CAA 90 bp | TCATGCAGTGAGTCTGTAGAGCTAAGGCTGGGACCTAGGGCTCCAAATACTCTCCCTGTGTCCCCCTCCTaGGCTCCTTCCGGGATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SCSESVELRLGPRAPNTLPVSPS*APSGIL Trigger: CAAAATCCCGGAAGGAGCCAAGGAGGGGGACACAGG...GAGAGTATTTGGAGCCCTAGGTCCCAGCCTTAGCTCTACAGACTCACTGCATGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000312562.7 ENST00000448083.6 |
||
| CDS-3UTR CAA 90 bp | AGGTCATGCAGTGAGTCTGTAGAGCTAAGGCTGGGACCTAGGGCTCCAAATACTCCAAATACTCTCCCATaGGCCTCTGGGTCCAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RSCSESVELRLGPRAPNTPNTLP*ASGSSE Trigger: CTCACTGGACCCAGAGGCCAATGGGAGAGTATTTGG...AGTATTTGGAGCCCTAGGTCCCAGCCTTAGCTCTACAGACTCACTGCATGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000312562.7 ENST00000448083.6 |
||
| CDS-3UTR CAA 90 bp | TCATGCAGTGAGTCTGTAGAGCTAAGGCTGGGACCTAGGGCTCCAAATACTCTCCCAAATACTCTCCCATaGGCCTCTGGGTCCAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SCSESVELRLGPRAPNTLPNTLP*ASGSSE Trigger: CTCACTGGACCCAGAGGCCAATGGGAGAGTATTTGG...GAGAGTATTTGGAGCCCTAGGTCCCAGCCTTAGCTCTACAGACTCACTGCATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000312562.7 ENST00000448083.6 |
||
| CDS-3UTR CAA 90 bp | AGGCCGAGCGGATGTAGCCCCACTTGTCAGATAAGACAAAGTCCAAAAATATCACCTGTGTCCCCCTCCTaGGCTCCTTCCGGGATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RPSGCSPTCQIRQSPKISPVSPS*APSGIL Trigger: CAAAATCCCGGAAGGAGCCAAGGAGGGGGACACAGG...TGATATTTTTGGACTTTGTCTTATCTGACAAGTGGGGCTACATCCGCTCGGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000312562.7 ENST00000448083.6 |
||
| CDS CAA 72 bp | GGTCACCTCCAGGCTCCACCCCCGAGACGCGCCGCCTaGGCCCGTCGGTCCCGAACTTGGCGACGCCTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GHLQAPPPRRAA*ARRSRTWRRLP Trigger: GGGGAGGCGTCGCCAAGTTCGGGACCGACGGGCCAAGGCGGCGCGTCTCGGGGGTGGAGCCTGGAGGTGACC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000534222.1 |
||
| CDS CCA 72 bp | GTCACCTCCAGGCTCCACCCCCGAGACGCGCCGCCTTaGCCCGTCGGTCCCGAACTTGGCGACGCCTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: VTSRLHPRDAPP*PVGPELGDASP Trigger: TGGGGAGGCGTCGCCAAGTTCGGGACCGACGGGCCAAGGCGGCGCGTCTCGGGGGTGGAGCCTGGAGGTGAC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000534222.1 |
||
| CDS GCA 72 bp | CATGCCCGGGGCTGGCGGCTCTGCGGGGTACACGGCTaGTGGGTTCTGACTCACCCGCGCCGTGCGGAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: HARGWRLCGVHG*WVLTHPRRAES Trigger: AGACTCCGCACGGCGCGGGTGAGTCAGAACCCAGCAGCCGTGTACCCCGCAGAGCCGCCAGCCCCGGGCATG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000448083.6 ENST00000531493.5 ENST00000532401.1 |
||
| CDS CCA 72 bp | GCCCGGGGCTGGCGGCTCTGCGGGGTACACGGCTGCTaGGTTCTGACTCACCCGCGCCGTGCGGAGTCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: ARGWRLCGVHGC*VLTHPRRAESF Trigger: AAAAGACTCCGCACGGCGCGGGTGAGTCAGAACCCAGCAGCCGTGTACCCCGCAGAGCCGCCAGCCCCGGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000448083.6 ENST00000531493.5 ENST00000532401.1 |
||
| CDS CAA 72 bp | CCCGAGACGCGCCGCCTTGGCCCGTCGGTCCCGAACTaGGCGACGCCTCCCCAAGTCCGGCTGCAGCCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: PETRRLGPSVPN*ATPPQVRLQPF Trigger: AAAAGGCTGCAGCCGGACTTGGGGAGGCGTCGCCAAGTTCGGGACCGACGGGCCAAGGCGGCGCGTCTCGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534222.1 |
||
| CDS GCA 72 bp | CCCGAAGTCTCGGAACATGCCCGGGGCTGGCGGCTCTaGGGGGTACACGGCTGCTGGGTTCTGACTCACCCG | + |
|
Preference number: 6 (lower is better) Translates to: PEVSEHARGWRL*GVHGCWVLTHP Trigger: CGGGTGAGTCAGAACCCAGCAGCCGTGTACCCCGCAGAGCCGCCAGCCCCGGGCATGTTCCGAGACTTCGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000448083.6 ENST00000531493.5 ENST00000532401.1 |
||