RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FOS (Homo sapiens)

Ensembl gene IDs: ENSG00000170345

Ensembl transcript IDs: ENST00000303562.9, ENST00000535987.5, ENST00000554212.5, ENST00000554617.1, ENST00000555242.1, ENST00000555347.1, ENST00000555672.1, ENST00000555686.1, ENST00000556324.2, ENST00000557139.1

Found 374 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCTGGCTCAACATGCTACTAACTACCAGCTCTCTGAAGTGTCACTaGGAACAATACACACTCCATGCGTTTTGCTACATCTCCGGAAGA +
Preference number: 1 (lower is better)
Translates to: AWLNMLLTTSSLKCH*EQYTLHAFCYISGR
Trigger: TCTTCCGGAGATGTAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGACACTTCAGAGAGCTGGTAGTTAGTAGCATGTTGAGCCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303562.9
3UTR GCA 90 bp AGCTCTCTGAAGTGTCACTGGGAACAATACACACTCCATGCGTTTTaGTACATCTCCGGAAGAGGTAAGGACTTGAGTCCACACATGGAT +
Preference number: 1 (lower is better)
Translates to: SSLKCHWEQYTLHAF*YISGRGKDLSPHMD
Trigger: ATCCATGTGTGGACTCAAGTCCTTACCTCTTCCGGAGATGTAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGACACTTCAGAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
3UTR GCA 90 bp GAACACACTATTGCCAGGAACACAGTAGTTATTGTTAAAATCAGCTaGACTAGATACAATTTGAAAATATCCAGCACCAGGTTAATTCCA +
Preference number: 1 (lower is better)
Translates to: EHTIARNTVVIVKIS*TRYNLKISSTRLIP
Trigger: TGGAATTAACCTGGTGCTGGATATTTTCAAATTGTATCTAGTGCAGCTGATTTTAACAATAACTACTGTGTTCCTGGCAATAGTGTGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303562.9
3UTR-3UTR CCA 90 bp TTGAGGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTGGGCAGTGGCACTTGTaGGTGCCGGCTGCCTCCCCT +
Preference number: 2 (lower is better)
Translates to: LRPTAWCVSRTDKVLPRSGQWHL*VPAASP
Trigger: AGGGGAGGCAGCCGGCACCCACAAGTGCCACTGCCC...AGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
3UTR-3UTR GCA 90 bp CACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGAGTGGCACTTGTGGGTaGCGGCTGCCTCCCCTTCCC +
Preference number: 2 (lower is better)
Translates to: HAQIRSSLGLQEPSREDVSGTCG*RLPPLP
Trigger: GGGAAGGGGAGGCAGCCGGCACCCACAAGTGCCACT...CACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
3UTR-3UTR CCA 90 bp CACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGCACCAGCTCGGGCAGTaGCACTTGTGGGTGCCGGCT +
Preference number: 2 (lower is better)
Translates to: HAQIRSSLGLQEPSREDVHQLGQ*HLWVPA
Trigger: AGCCGGCACCCACAAGTGCCACTGCCCGAGCTGGTG...CACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
3UTR-3UTR CCA 90 bp GGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCAGGGGCAGTGGCACTTGTaGGTGCCGGCTGCCTCCCCT +
Preference number: 2 (lower is better)
Translates to: GLQEPSREDVFLLSVMHQGQWHL*VPAASP
Trigger: AGGGGAGGCAGCCGGCACCCACAAGTGCCACTGCCC...CTGGTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
3UTR-3UTR CCA 90 bp TCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAGGGCAGTGGCACTTGTaGGTGCCGGCTGCCTCCCCT +
Preference number: 2 (lower is better)
Translates to: SSLGLQEPSREDVFLLSVGQWHL*VPAASP
Trigger: AGGGGAGGCAGCCGGCACCCACAAGTGCCACTGCCC...TACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
3UTR-3UTR CCA 90 bp GTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAACACCAGCTCGGGCAGTaGCACTTGTGGGTGCCGGCT +
Preference number: 2 (lower is better)
Translates to: VFHAQIRSSLGLQEPSREHQLGQ*HLWVPA
Trigger: AGCCGGCACCCACAAGTGCCACTGCCCGAGCTGGTG...TTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
3UTR-3UTR GCA 90 bp TGCTACATCTCCGGAAGAGGTAAGGACTTGAGTCCACACATGGATGCTTTCAAGAGTGGCACTTGTGGGTaGCGGCTGCCTCCCCTTCCC +
Preference number: 2 (lower is better)
Translates to: CYISGRGKDLSPHMDAFKSGTCG*RLPPLP
Trigger: GGGAAGGGGAGGCAGCCGGCACCCACAAGTGCCACT...CTTGAAAGCATCCATGTGTGGACTCAAGTCCTTACCTCTTCCGGAGATGTAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
3UTR-3UTR GCA 90 bp TGTCACTGGGAACAATACACACTCCATGCGTTTTGCTACATCTCCGGAAGAGGTAGTGGCACTTGTGGGTaGCGGCTGCCTCCCCTTCCC +
Preference number: 2 (lower is better)
Translates to: CHWEQYTLHAFCYISGRGSGTCG*RLPPLP
Trigger: GGGAAGGGGAGGCAGCCGGCACCCACAAGTGCCACT...ACCTCTTCCGGAGATGTAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
3UTR-3UTR CCA 90 bp TGCTACATCTCCGGAAGAGGTAAGGACTTGAGTCCACACATGGATGCTTTCAAGTTGAGGCCCACAGCCTaGTGTGTTTCACGCACAGAT +
Preference number: 2 (lower is better)
Translates to: CYISGRGKDLSPHMDAFKLRPTA*CVSRTD
Trigger: ATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAA...CTTGAAAGCATCCATGTGTGGACTCAAGTCCTTACCTCTTCCGGAGATGTAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
3UTR-3UTR TCA 90 bp GAGCCCAGTCTGAAAGCATGCGGTAAGAAACTTAGGGAAGAAACTATGAGAGTAGTGAGACTCAGAGTCTaGGTTGGGATGGAATGGGCT +
Preference number: 2 (lower is better)
Translates to: EPSLKACGKKLREETMRVVRLRV*VGMEWA
Trigger: AGCCCATTCCATCCCAACTCAGACTCTGAGTCTCAC...TACTCTCATAGTTTCTTCCCTAAGTTTCTTACCGCATGCTTTCAGACTGGGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554617.1
3UTR-3UTR CCA 90 bp CCCAGTCTGAAAGCATGCGGTAAGAAACTTAGGGAAGAAACTATGAGAGTACTTGAGTCTGAGTTGGGATaGAATGGGCTTGGAGCCAGG +
Preference number: 2 (lower is better)
Translates to: PSLKACGKKLREETMRVLESELG*NGLGAR
Trigger: CCTGGCTCCAAGCCCATTCCATCCCAACTCAGACTC...AAGTACTCTCATAGTTTCTTCCCTAAGTTTCTTACCGCATGCTTTCAGACTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554617.1
3UTR-3UTR CCA 90 bp CCCAGTCTGAAAGCATGCGGTAAGAAACTTAGGGAAGAAACTATGAGAGTACTTACTCAGAGTCTGAGTTaGGATGGAATGGGCTTGGAG +
Preference number: 2 (lower is better)
Translates to: PSLKACGKKLREETMRVLTQSLS*DGMGLE
Trigger: CTCCAAGCCCATTCCATCCCAACTCAGACTCTGAGT...AAGTACTCTCATAGTTTCTTCCCTAAGTTTCTTACCGCATGCTTTCAGACTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554617.1
3UTR-3UTR CAA 90 bp GGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCAGCTCGGGCAGTGGCACTaGTGGGTGCCGGCTGCCTCC +
Preference number: 3 (lower is better)
Translates to: GLQEPSREDVFLLSVMHQLGQWH*WVPAAS
Trigger: GGAGGCAGCCGGCACCCACAAGTGCCACTGCCCGAG...CTGGTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
3UTR-3UTR CAA 90 bp TCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTACTCGGGCAGTGGCACTaGTGGGTGCCGGCTGCCTCC +
Preference number: 3 (lower is better)
Translates to: SSLGLQEPSREDVFLLSVLGQWH*WVPAAS
Trigger: GGAGGCAGCCGGCACCCACAAGTGCCACTGCCCGAG...TACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
3UTR-3UTR CAA 90 bp TGCTACATCTCCGGAAGAGGTAAGGACTTGAGTCCACACATGGATGCTTTCAAGCTCGGGCAGTGGCACTaGTGGGTGCCGGCTGCCTCC +
Preference number: 3 (lower is better)
Translates to: CYISGRGKDLSPHMDAFKLGQWH*WVPAAS
Trigger: GGAGGCAGCCGGCACCCACAAGTGCCACTGCCCGAG...CTTGAAAGCATCCATGTGTGGACTCAAGTCCTTACCTCTTCCGGAGATGTAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
3UTR CCA 72 bp CACATGGATGCTTTCAAGTCCTTGAGGCCCACAGCCTaGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGG +
Preference number: 3 (lower is better)
Translates to: HMDAFKSLRPTA*CVSRTDKVLPR
Trigger: CCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAAGGACTTGAAAGCATCCATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
3UTR-3UTR CAA 90 bp TACCAGCTCTCTGAAGTGTCACTGGGAACAATACACACTCCATGCGTTTTGCTAGGAAGAGGTAAGGACTaGAGTCCACACATGGATGCT +
Preference number: 3 (lower is better)
Translates to: YQLSEVSLGTIHTPCVLLGRGKD*SPHMDA
Trigger: AGCATCCATGTGTGGACTCAAGTCCTTACCTCTTCC...TAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGACACTTCAGAGAGCTGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
3UTR-3UTR CAA 90 bp AACAAAGAAGAGCCCAGTCTGAAAGCATGCGGTAAGAAACTTAGGGAAGAAACTGACTCAGAGTCTGAGTaGGGATGGAATGGGCTTGGA +
Preference number: 3 (lower is better)
Translates to: NKEEPSLKACGKKLREETDSESE*GWNGLG
Trigger: TCCAAGCCCATTCCATCCCAACTCAGACTCTGAGTC...AGTTTCTTCCCTAAGTTTCTTACCGCATGCTTTCAGACTGGGCTCTTCTTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554617.1
3UTR GCA 72 bp AAGTGTCACTGGGAACAATACACACTCCATGCGTTTTaGTACATCTCCGGAAGAGGTAAGGACTTGAGTCCA +
Preference number: 3 (lower is better)
Translates to: KCHWEQYTLHAF*YISGRGKDLSP
Trigger: TGGACTCAAGTCCTTACCTCTTCCGGAGATGTAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGACACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
3UTR CCA 72 bp AACATGCTACTAACTACCAGCTCTCTGAAGTGTCACTaGGAACAATACACACTCCATGCGTTTTGCTACATC +
Preference number: 3 (lower is better)
Translates to: NMLLTTSSLKCH*EQYTLHAFCYI
Trigger: GATGTAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGACACTTCAGAGAGCTGGTAGTTAGTAGCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303562.9
3UTR GCA 72 bp ATTGCCAGGAACACAGTAGTTATTGTTAAAATCAGCTaGACTAGATACAATTTGAAAATATCCAGCACCAGG +
Preference number: 3 (lower is better)
Translates to: IARNTVVIVKIS*TRYNLKISSTR
Trigger: CCTGGTGCTGGATATTTTCAAATTGTATCTAGTGCAGCTGATTTTAACAATAACTACTGTGTTCCTGGCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303562.9
3UTR GCA 72 bp ACTGTTAATGTCAGAACATTCAGACCACCTCAACAATaGATGATCAGTAACATTACAATGAACATTGATGTT +
Preference number: 3 (lower is better)
Translates to: TVNVRTFRPPQQ*MISNITMNIDV
Trigger: AACATCAATGTTCATTGTAATGTTACTGATCATGCATTGTTGAGGTGGTCTGAATGTTCTGACATTAACAGT
35% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303562.9
CDS-3UTR GCA 90 bp CAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCACTGCTCGTTCGCTaGGCCGCGGCCGCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: QPGVFHAQIRSSLGLQEPSLLVR*AAAAGS
Trigger: TGAGCCGGCGGCCGCGGCGCAGCGAACGAGCAGTGA...GGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000535987.5
CDS-3UTR CCA 90 bp TCCTTGAGGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGCCAGCTCTGTGGCCATaGGCCCCATCCCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: SLRPTAWCVSRTDKVLPRPALWP*APSPGS
Trigger: GCTCCCTGGGGATGGGGCCCATGGCCACAGAGCTGG...CCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CCA 90 bp GGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGGGCAGTGGCACTTGTaGGTGCCGGCTGCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: GPQPGVFHAQIRSSLGLQGQWHL*VPAASP
Trigger: AGGGGAGGCAGCCGGCACCCACAAGTGCCACTGCCC...CTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR GCA 90 bp ACACATGGATGCTTTCAAGTCCTTGAGGCCCACAGCCTGGTGTGTTTCACGCACTCACTGCTCGTTCGCTaGGCCGCGGCCGCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: THGCFQVLEAHSLVCFTHSLLVR*AAAAGS
Trigger: TGAGCCGGCGGCCGCGGCGCAGCGAACGAGCAGTGA...GTGCGTGAAACACACCAGGCTGTGGGCCTCAAGGACTTGAAAGCATCCATGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000535987.5
CDS-3UTR GCA 90 bp GGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGTGCTGCTGCTGCCCTTaGGGTGGGCAGCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: GPQPGVFHAQIRSSLGLQCCCCP*GGQLHS
Trigger: GCTGTGCAGCTGCCCACCGCAAGGGCAGCAGCAGCA...CTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR GCA 90 bp TCCTTGAGGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGAGTGGCACTTGTGGGTaGCGGCTGCCTCCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: SLRPTAWCVSRTDKVLPRSGTCG*RLPPLP
Trigger: GGGAAGGGGAGGCAGCCGGCACCCACAAGTGCCACT...CCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CCA 90 bp GGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGGCTCTGGTCTGCGATaGGGCCACGGAGGAGACGAG +
Preference number: 4 (lower is better)
Translates to: GPQPGVFHAQIRSSLGLQGSGLR*GHGGDE
Trigger: CTCGTCTCCTCCGTGGCCCCATCGCAGACCAGAGCC...CTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR CCA 90 bp TCCTTGAGGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGCGGGGTGGCAACCTCTaGCAGGCCCCCAGTCAGATC +
Preference number: 4 (lower is better)
Translates to: SLRPTAWCVSRTDKVLPRRGGNL*QAPSQI
Trigger: GATCTGACTGGGGGCCTGCCAGAGGTTGCCACCCCG...CCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CCA 90 bp GCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCCCTCAGACTCCGGGGTaGCAACCTCTGGCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: AWCVSRTDKVLPRSTGTLPQTPG*QPLAGP
Trigger: GGGGCCTGCCAGAGGTTGCCACCCCGGAGTCTGAGG...GAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CCA 90 bp TTGAGGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTCCTCAGACTCCGGGGTaGCAACCTCTGGCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: LRPTAWCVSRTDKVLPRSPQTPG*QPLAGP
Trigger: GGGGCCTGCCAGAGGTTGCCACCCCGGAGTCTGAGG...AGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CCA 90 bp AAGTCCTTGAGGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTCCAGCTCTGTGGCCATaGGCCCCATCCCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: KSLRPTAWCVSRTDKVLPPALWP*APSPGS
Trigger: GCTCCCTGGGGATGGGGCCCATGGCCACAGAGCTGG...AGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAAGGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CCA 90 bp AAGTCCTTGAGGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTCTGCTGCCCTTGCGGTaGGCAGCTGCACAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: KSLRPTAWCVSRTDKVLPLLPLR*AAAQLG
Trigger: CCCCAGCTGTGCAGCTGCCCACCGCAAGGGCAGCAG...AGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAAGGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CCA 90 bp CAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCGGGCAGTGGCACTTGTaGGTGCCGGCTGCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: QPGVFHAQIRSSLGLQEPGQWHL*VPAASP
Trigger: AGGGGAGGCAGCCGGCACCCACAAGTGCCACTGCCC...GGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR TCA 90 bp GGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGAGCTGGGAGTACAGGTaGCCACCGGAGTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: GPQPGVFHAQIRSSLGLQSWEYR*PPECTG
Trigger: CCCTGTGCACTCCGGTGGTCACCTGTACTCCCAGCT...CTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR TCA 90 bp GGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGCAGCGTGGGTGAGCTaGGCGAGTCAGAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: GPQPGVFHAQIRSSLGLQAAWVS*ASQRKA
Trigger: AGCCTTCCTCTGACTCGCTCAGCTCACCCACGCTGC...CTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR GCA 90 bp CAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCGGCTGCACCAGCCACTaGAGGTCCGGACTGGTCGAG +
Preference number: 4 (lower is better)
Translates to: QPGVFHAQIRSSLGLQEPGCTSH*RSGLVE
Trigger: CTCGACCAGTCCGGACCTGCAGTGGCTGGTGCAGCC...GGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR GCA 90 bp CACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGGAGACGAGGGCGGGCTaGACCAGCCACTGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: HAQIRSSLGLQEPSREDVETRAG*TSHCRS
Trigger: GGACCTGCAGTGGCTGGTGCAGCCCGCCCTCGTCTC...CACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR GCA 90 bp CAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCAGCTCGGGGAGACGAGGGCGGGCTaGACCAGCCACTGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: QEPSREDVFLLSVMHQLGETRAG*TSHCRS
Trigger: GGACCTGCAGTGGCTGGTGCAGCCCGCCCTCGTCTC...CCCGAGCTGGTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR GCA 90 bp TTGAGGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTCCACCTTGCCCCTCCTaGCAATGCTCTGCGCTCGGC +
Preference number: 4 (lower is better)
Translates to: LRPTAWCVSRTDKVLPRSPPCPS*QCSALG
Trigger: GCCGAGCGCAGAGCATTGGCAGGAGGGGCAAGGTGG...AGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR GCA 90 bp CAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTGCTGCTGCTGCCCTTaGGGTGGGCAGCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: QPGVFHAQIRSSLGLQEPCCCCP*GGQLHS
Trigger: GCTGTGCAGCTGCCCACCGCAAGGGCAGCAGCAGCA...GGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR GCA 90 bp TTGAGGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTTGCTGCTGCTGCCCTTaGGGTGGGCAGCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: LRPTAWCVSRTDKVLPRSCCCCP*GGQLHS
Trigger: GCTGTGCAGCTGCCCACCGCAAGGGCAGCAGCAGCA...AGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR GCA 90 bp AAGTCCTTGAGGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGTGGCACTTGTGGGTaGCGGCTGCCTCCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: KSLRPTAWCVSRTDKVLPSGTCG*RLPPLP
Trigger: GGGAAGGGGAGGCAGCCGGCACCCACAAGTGCCACT...AGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAAGGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CCA 90 bp TTGAGGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTCGGGGTGGCAACCTCTaGCAGGCCCCCAGTCAGATC +
Preference number: 4 (lower is better)
Translates to: LRPTAWCVSRTDKVLPRSRGGNL*QAPSQI
Trigger: GATCTGACTGGGGGCCTGCCAGAGGTTGCCACCCCG...AGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CCA 90 bp GAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCAGCTCGGGCAGCCAGCTCTGTGGCCATaGGCCCCATCCCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: EPSREDVFLLSVMHQLGQPALWP*APSPGS
Trigger: GCTCCCTGGGGATGGGGCCCATGGCCACAGAGCTGG...CTGCCCGAGCTGGTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CCA 90 bp CAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCGGGCAGCTGCACAGCTaGGGAAGGAGTCAGCCTCGG +
Preference number: 4 (lower is better)
Translates to: QPGVFHAQIRSSLGLQEPGQLHS*GRSQPR
Trigger: CCGAGGCTGACTCCTTCCCCAGCTGTGCAGCTGCCC...GGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CCA 90 bp TTGAGGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTCACCAGCTCGGGCAGTaGCACTTGTGGGTGCCGGCT +
Preference number: 4 (lower is better)
Translates to: LRPTAWCVSRTDKVLPRSHQLGQ*HLWVPA
Trigger: AGCCGGCACCCACAAGTGCCACTGCCCGAGCTGGTG...AGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR TCA 90 bp GGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGCTTGACAGGTTCCACTaGGGGCTTGGGCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: GPQPGVFHAQIRSSLGLQLDRFH*GLGLRV
Trigger: GACCCTGAGCCCAAGCCCTCAGTGGAACCTGTCAAG...CTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR TCA 90 bp TCCTTGAGGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGGCCACTGGGCCTGGATaGTGCTGGGAACAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: SLRPTAWCVSRTDKVLPRATGPG*CWEQEV
Trigger: GACTTCCTGTTCCCAGCATCATCCAGGCCCAGTGGC...CCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR TCA 90 bp CCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAAGGCCAGCAGCGTGGGTaGGCTGAGCGAGTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: PQPGVFHAQIRSSLGLQEGQQRG*AERVRG
Trigger: TCCTCTGACTCGCTCAGCTCACCCACGCTGCTGGCC...TTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR TCA 90 bp GAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCAGCTCGGGCAGGGCCAGCAGCGTGGGTaGGCTGAGCGAGTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: EPSREDVFLLSVMHQLGQGQQRG*AERVRG
Trigger: TCCTCTGACTCGCTCAGCTCACCCACGCTGCTGGCC...CTGCCCGAGCTGGTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR GCA 90 bp ACACTCCATGCGTTTTGCTACATCTCCGGAAGAGGTAAGGACTTGAGTCCACACCCGGGGACGCGCTGCTaGAGCGGGAGGATGACGCCT +
Preference number: 4 (lower is better)
Translates to: TLHAFCYISGRGKDLSPHPGTRC*SGRMTP
Trigger: AGGCGTCATCCTCCCGCTGCAGCAGCGCGTCCCCGG...GTGTGGACTCAAGTCCTTACCTCTTCCGGAGATGTAGCAAAACGCATGGAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303562.9
CDS-3UTR GCA 90 bp TCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTACCGGGGACGCGCTGCTaGAGCGGGAGGATGACGCCT +
Preference number: 4 (lower is better)
Translates to: SSLGLQEPSREDVFLLSVPGTRC*SGRMTP
Trigger: AGGCGTCATCCTCCCGCTGCAGCAGCGCGTCCCCGG...TACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000535987.5
CDS-3UTR GCA 90 bp GAGACACAGACCCAGGCCTGGCTCAACATGCTACTAACTACCAGCTCTCTGAAGTGCCCCTCCTGCCAATaGTCTGCGCTCGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: ETQTQAWLNMLLTTSSLKCPSCQ*SALGLL
Trigger: CAGGAGGCCGAGCGCAGAGCATTGGCAGGAGGGGCA...CTTCAGAGAGCTGGTAGTTAGTAGCATGTTGAGCCAGGCCTGGGTCTGTGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303562.9
CDS-3UTR GCA 90 bp GCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCCCCAGGGAGCCACTGTaGAGAGGCTCCCAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: AWCVSRTDKVLPRSTGTLPREPL*RGSQSA
Trigger: AGCAGACTGGGAGCCTCTGCACAGTGGCTCCCTGGG...GAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR GCA 90 bp GCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCGCTCATTGCTGCTGCTaGCCTTGCGGTGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: AWCVSRTDKVLPRSTGTLAHCCC*PCGGQL
Trigger: CAGCTGCCCACCGCAAGGGCAGCAGCAGCAATGAGC...GAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR GCA 90 bp GGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGAAGGCTCATTGCTGCTaGTGCCCTTGCGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: GPQPGVFHAQIRSSLGLQKAHCC*CPCGGQ
Trigger: CTGCCCACCGCAAGGGCAGCAGCAGCAATGAGCCTT...CTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CCA 90 bp CACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGGGCTCTGGTCTGCGATaGGGCCACGGAGGAGACGAG +
Preference number: 4 (lower is better)
Translates to: HAQIRSSLGLQEPSREDVGSGLR*GHGGDE
Trigger: CTCGTCTCCTCCGTGGCCCCATCGCAGACCAGAGCC...CACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR CCA 90 bp CAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCACAACGCCAGCCCTaGAGTAAGCCCCAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: QPGVFHAQIRSSLGLQEPSQRQP*SKPQRR
Trigger: CCTCCGCTGGGGCTTACTCCAGGGCTGGCGTTGTGA...GGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR CCA 90 bp CCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAAGGGCAGCTGCACAGCTaGGGAAGGAGTCAGCCTCGG +
Preference number: 4 (lower is better)
Translates to: PQPGVFHAQIRSSLGLQEGQLHS*GRSQPR
Trigger: CCGAGGCTGACTCCTTCCCCAGCTGTGCAGCTGCCC...TTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CCA 90 bp AGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTCTGCTGCCCTTGCGGTaGGCAGCTGCACAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RSSLGLQEPSREDVFLLSLLPLR*AAAQLG
Trigger: CCCCAGCTGTGCAGCTGCCCACCGCAAGGGCAGCAG...AGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR TCA 90 bp ACACATGGATGCTTTCAAGTCCTTGAGGCCCACAGCCTGGTGTGTTTCACGCACAGAAGTCCTGCGCGTTaGCAGGCGAGCCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: THGCFQVLEAHSLVCFTHRSPAR*QASPCW
Trigger: CCAGCATGGGCTCGCCTGTCAACGCGCAGGACTTCT...GTGCGTGAAACACACCAGGCTGTGGGCCTCAAGGACTTGAAAGCATCCATGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000535987.5
CDS-3UTR TCA 90 bp GAGACACAGACCCAGGCCTGGCTCAACATGCTACTAACTACCAGCTCTCTGAAGGGGACTCCGAAAGGGTaGGGGGCTCTGGTCTGCGAT +
Preference number: 4 (lower is better)
Translates to: ETQTQAWLNMLLTTSSLKGTPKG*GALVCD
Trigger: ATCGCAGACCAGAGCCCCTCACCCTTTCGGAGTCCC...CTTCAGAGAGCTGGTAGTTAGTAGCATGTTGAGCCAGGCCTGGGTCTGTGTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303562.9
CDS-3UTR TCA 90 bp GGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGTTGCAGGCAGGTCGGTaGGCTGCCAGGATGAACTCT +
Preference number: 4 (lower is better)
Translates to: GPQPGVFHAQIRSSLGLQLQAGR*AARMNS
Trigger: AGAGTTCATCCTGGCAGCTCACCGACCTGCCTGCAA...CTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR TCA 90 bp CCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAAAGCTGGGAGTACAGGTaGCCACCGGAGTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: PQPGVFHAQIRSSLGLQESWEYR*PPECTG
Trigger: CCCTGTGCACTCCGGTGGTCACCTGTACTCCCAGCT...TTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR TCA 90 bp CACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGGCAGCGTGGGTGAGCTaGGCGAGTCAGAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: HAQIRSSLGLQEPSREDVAAWVS*ASQRKA
Trigger: AGCCTTCCTCTGACTCGCTCAGCTCACCCACGCTGC...CACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR GCA 90 bp CACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGCCCAGGGAGCCACTGTaGAGAGGCTCCCAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: HAQIRSSLGLQEPSREDVPREPL*RGSQSA
Trigger: AGCAGACTGGGAGCCTCTGCACAGTGGCTCCCTGGG...CACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR GCA 90 bp GACACAGACCCAGGCCTGGCTCAACATGCTACTAACTACCAGCTCTCTGAAGTGGCTCATTGCTGCTGCTaGCCTTGCGGTGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: DTDPGLAQHATNYQLSEVAHCCC*PCGGQL
Trigger: CAGCTGCCCACCGCAAGGGCAGCAGCAGCAATGAGC...CACTTCAGAGAGCTGGTAGTTAGTAGCATGTTGAGCCAGGCCTGGGTCTGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303562.9
CDS-3UTR GCA 90 bp ACACATGGATGCTTTCAAGTCCTTGAGGCCCACAGCCTGGTGTGTTTCACGCACGCTCATTGCTGCTGCTaGCCTTGCGGTGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: THGCFQVLEAHSLVCFTHAHCCC*PCGGQL
Trigger: CAGCTGCCCACCGCAAGGGCAGCAGCAGCAATGAGC...GTGCGTGAAACACACCAGGCTGTGGGCCTCAAGGACTTGAAAGCATCCATGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR GCA 90 bp CCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAAGCTCATTGCTGCTGCTaGCCTTGCGGTGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PQPGVFHAQIRSSLGLQEAHCCC*PCGGQL
Trigger: CAGCTGCCCACCGCAAGGGCAGCAGCAGCAATGAGC...TTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR GCA 90 bp AAGTCCTTGAGGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGAAGGCTCATTGCTaGTGCTGCCCTTGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: KSLRPTAWCVSRTDKVLPRKAHC*CCPCGG
Trigger: CCCACCGCAAGGGCAGCAGCAGCAATGAGCCTTCCT...AGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAAGGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR GCA 90 bp CAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCCTCCTGCAGCTTCCCTaGTTCCTGGCACCCCACTGT +
Preference number: 4 (lower is better)
Translates to: QPGVFHAQIRSSLGLQEPLLQLP*FLAPHC
Trigger: ACAGTGGGGTGCCAGGAAGCAGGGAAGCTGCAGGAG...GGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555347.1
CDS-3UTR CCA 90 bp ACACATGGATGCTTTCAAGTCCTTGAGGCCCACAGCCTGGTGTGTTTCACGCACCAGGCGAGCCCATGCTaGAGAAGGAGTCTGCGGGTG +
Preference number: 4 (lower is better)
Translates to: THGCFQVLEAHSLVCFTHQASPC*RRSLRV
Trigger: CACCCGCAGACTCCTTCTCCAGCATGGGCTCGCCTG...GTGCGTGAAACACACCAGGCTGTGGGCCTCAAGGACTTGAAAGCATCCATGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000535987.5
CDS-3UTR CCA 90 bp GTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAAAGGGTGAGGGGCTCTaGTCTGCGATGGGGCCACGG +
Preference number: 4 (lower is better)
Translates to: VFHAQIRSSLGLQEPSREKGEGL*SAMGPR
Trigger: CCGTGGCCCCATCGCAGACCAGAGCCCCTCACCCTT...TTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR CCA 90 bp CACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTCACAACGCCAGCCCTaGAGTAAGCCCCAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: HAQIRSSLGLQEPSREDVSQRQP*SKPQRR
Trigger: CCTCCGCTGGGGCTTACTCCAGGGCTGGCGTTGTGA...CACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR CCA 90 bp GTGTCACTGGGAACAATACACACTCCATGCGTTTTGCTACATCTCCGGAAGAGGCCTCAGACTCCGGGGTaGCAACCTCTGGCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: VSLGTIHTPCVLLHLRKRPQTPG*QPLAGP
Trigger: GGGGCCTGCCAGAGGTTGCCACCCCGGAGTCTGAGG...CCTCTTCCGGAGATGTAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR CCA 90 bp GTGTCACTGGGAACAATACACACTCCATGCGTTTTGCTACATCTCCGGAAGAGGCTGCTGCCCTTGCGGTaGGCAGCTGCACAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: VSLGTIHTPCVLLHLRKRLLPLR*AAAQLG
Trigger: CCCCAGCTGTGCAGCTGCCCACCGCAAGGGCAGCAG...CCTCTTCCGGAGATGTAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR CCA 90 bp GCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTGGGCAGTGGCACTTGTaGGTGCCGGCTGCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: AQIRSSLGLQEPSREDVFGQWHL*VPAASP
Trigger: AGGGGAGGCAGCCGGCACCCACAAGTGCCACTGCCC...AAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR TCA 90 bp AGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGGGACTCCGAAAGGGTaGGGGGCTCTGGTCTGCGAT +
Preference number: 4 (lower is better)
Translates to: RSSLGLQEPSREDVFLLSGTPKG*GALVCD
Trigger: ATCGCAGACCAGAGCCCCTCACCCTTTCGGAGTCCC...AGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR TCA 90 bp GGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGCTTGACAGGTTCCACTaGGGGCTTGGGCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: GVFHAQIRSSLGLQEPSRLDRFH*GLGLRV
Trigger: GACCCTGAGCCCAAGCCCTCAGTGGAACCTGTCAAG...CCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR TCA 90 bp CAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCAGCTCGGGCTTGACAGGTTCCACTaGGGGCTTGGGCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: QEPSREDVFLLSVMHQLGLDRFH*GLGLRV
Trigger: GACCCTGAGCCCAAGCCCTCAGTGGAACCTGTCAAG...CCCGAGCTGGTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR GCA 90 bp GCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTGGCTGCACCAGCCACTaGAGGTCCGGACTGGTCGAG +
Preference number: 4 (lower is better)
Translates to: AQIRSSLGLQEPSREDVFGCTSH*RSGLVE
Trigger: CTCGACCAGTCCGGACCTGCAGTGGCTGGTGCAGCC...AAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR GCA 90 bp GTCACTGGGAACAATACACACTCCATGCGTTTTGCTACATCTCCGGAAGAGGTAGAGACGAGGGCGGGCTaGACCAGCCACTGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: VTGNNTHSMRFATSPEEVETRAG*TSHCRS
Trigger: GGACCTGCAGTGGCTGGTGCAGCCCGCCCTCGTCTC...TACCTCTTCCGGAGATGTAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR GCA 90 bp ACACTCCATGCGTTTTGCTACATCTCCGGAAGAGGTAAGGACTTGAGTCCACACTGCCCCTCCTGCCAATaGTCTGCGCTCGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: TLHAFCYISGRGKDLSPHCPSCQ*SALGLL
Trigger: CAGGAGGCCGAGCGCAGAGCATTGGCAGGAGGGGCA...GTGTGGACTCAAGTCCTTACCTCTTCCGGAGATGTAGCAAAACGCATGGAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR GCA 90 bp TTGAGGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTGGTCATCAGGGATCTTaGAGGCAGGTCGGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: LRPTAWCVSRTDKVLPRSGHQGS*RQVGEL
Trigger: CAGCTCACCGACCTGCCTGCAAGATCCCTGATGACC...AGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR GCA 90 bp AGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTCCCAGGGAGCCACTGTaGAGAGGCTCCCAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: RSSLGLQEPSREDVFLLSPREPL*RGSQSA
Trigger: AGCAGACTGGGAGCCTCTGCACAGTGGCTCCCTGGG...AGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR GCA 90 bp GTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAACCCAGGGAGCCACTGTaGAGAGGCTCCCAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: VFHAQIRSSLGLQEPSREPREPL*RGSQSA
Trigger: AGCAGACTGGGAGCCTCTGCACAGTGGCTCCCTGGG...TTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR GCA 90 bp GAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCAGCTCGGGCAGAAGGCTCATTGCTGCTaGTGCCCTTGCGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: EPSREDVFLLSVMHQLGQKAHCC*CPCGGQ
Trigger: CTGCCCACCGCAAGGGCAGCAGCAGCAATGAGCCTT...CTGCCCGAGCTGGTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR GCA 90 bp CCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAAAAGGCTCATTGCTGCTaGTGCCCTTGCGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: PQPGVFHAQIRSSLGLQEKAHCC*CPCGGQ
Trigger: CTGCCCACCGCAAGGGCAGCAGCAGCAATGAGCCTT...TTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR GCA 90 bp GAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCAGCTCGGGCAGAGGAAGGCTCATTGCTaGTGCTGCCCTTGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: EPSREDVFLLSVMHQLGQRKAHC*CCPCGG
Trigger: CCCACCGCAAGGGCAGCAGCAGCAATGAGCCTTCCT...CTGCCCGAGCTGGTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR GCA 90 bp TTGAGGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTCAGAGGAAGGCTCATTaGTGCTGCTGCCCTTGCGGT +
Preference number: 4 (lower is better)
Translates to: LRPTAWCVSRTDKVLPRSQRKAH*CCCPCG
Trigger: ACCGCAAGGGCAGCAGCAGCAATGAGCCTTCCTCTG...AGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR GCA 90 bp TTGAGGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTTCCCAGTTACGGATGTaGAGCCAGCCCCATCAGTGG +
Preference number: 4 (lower is better)
Translates to: LRPTAWCVSRTDKVLPRSSQLRM*SQPHQW
Trigger: CCACTGATGGGGCTGGCTGCACATCCGTAACTGGGA...AGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555347.1
CDS-3UTR CCA 90 bp GAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCAGCTCGGGCAGGCTGTGGAGCAGAGCTaGGTAGGAGCACGGTCACTG +
Preference number: 4 (lower is better)
Translates to: EPSREDVFLLSVMHQLGQAVEQS*VGARSL
Trigger: CAGTGACCGTGCTCCTACCCAGCTCTGCTCCACAGC...CTGCCCGAGCTGGTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000535987.5
CDS-3UTR CCA 90 bp GCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTAAGGGTGAGGGGCTCTaGTCTGCGATGGGGCCACGG +
Preference number: 4 (lower is better)
Translates to: AQIRSSLGLQEPSREDVFKGEGL*SAMGPR
Trigger: CCGTGGCCCCATCGCAGACCAGAGCCCCTCACCCTT...AAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR CCA 90 bp CAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCAGCTCGGGCTCGGCCTCCTGTCATaGTCTTCACAACGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: QEPSREDVFLLSVMHQLGLGLLS*SSQRQP
Trigger: GGGCTGGCGTTGTGAAGACCATGACAGGAGGCCGAG...CCCGAGCTGGTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR CCA 90 bp TCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTACGGGGTGGCAACCTCTaGCAGGCCCCCAGTCAGATC +
Preference number: 4 (lower is better)
Translates to: SSLGLQEPSREDVFLLSVRGGNL*QAPSQI
Trigger: GATCTGACTGGGGGCCTGCCAGAGGTTGCCACCCCG...TACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CCA 90 bp TACACACTCCATGCGTTTTGCTACATCTCCGGAAGAGGTAAGGACTTGAGTCCACCAGCTCTGTGGCCATaGGCCCCATCCCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: YTLHAFCYISGRGKDLSPPALWP*APSPGS
Trigger: GCTCCCTGGGGATGGGGCCCATGGCCACAGAGCTGG...TGGACTCAAGTCCTTACCTCTTCCGGAGATGTAGCAAAACGCATGGAGTGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR CCA 90 bp GCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTGGGCAGCTGCACAGCTaGGGAAGGAGTCAGCCTCGG +
Preference number: 4 (lower is better)
Translates to: AQIRSSLGLQEPSREDVFGQLHS*GRSQPR
Trigger: CCGAGGCTGACTCCTTCCCCAGCTGTGCAGCTGCCC...AAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CCA 90 bp ACACTCCATGCGTTTTGCTACATCTCCGGAAGAGGTAAGGACTTGAGTCCACACGGGCAGCTGCACAGCTaGGGAAGGAGTCAGCCTCGG +
Preference number: 4 (lower is better)
Translates to: TLHAFCYISGRGKDLSPHGQLHS*GRSQPR
Trigger: CCGAGGCTGACTCCTTCCCCAGCTGTGCAGCTGCCC...GTGTGGACTCAAGTCCTTACCTCTTCCGGAGATGTAGCAAAACGCATGGAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR CCA 90 bp TCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTACACCAGCTCGGGCAGTaGCACTTGTGGGTGCCGGCT +
Preference number: 4 (lower is better)
Translates to: SSLGLQEPSREDVFLLSVHQLGQ*HLWVPA
Trigger: AGCCGGCACCCACAAGTGCCACTGCCCGAGCTGGTG...TACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR TCA 90 bp GCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTGCTGCAGCGGGAGGATaGCGCCTCGTAGTCTGCGTT +
Preference number: 4 (lower is better)
Translates to: AQIRSSLGLQEPSREDVFAAAGG*RLVVCV
Trigger: AACGCAGACTACGAGGCGTCATCCTCCCGCTGCAGC...AAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000535987.5
CDS-3UTR TCA 90 bp GGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCAGAGAAGTCCTGCGCGTTaGCAGGCGAGCCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: GLQEPSREDVFLLSVMHQRSPAR*QASPCW
Trigger: CCAGCATGGGCTCGCCTGTCAACGCGCAGGACTTCT...CTGGTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000535987.5
CDS-3UTR TCA 90 bp GCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTGGGACTCCGAAAGGGTaGGGGGCTCTGGTCTGCGAT +
Preference number: 4 (lower is better)
Translates to: AQIRSSLGLQEPSREDVFGTPKG*GALVCD
Trigger: ATCGCAGACCAGAGCCCCTCACCCTTTCGGAGTCCC...AAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR TCA 90 bp GACACAGACCCAGGCCTGGCTCAACATGCTACTAACTACCAGCTCTCTGAAGTGTTGCAGGCAGGTCGGTaGGCTGCCAGGATGAACTCT +
Preference number: 4 (lower is better)
Translates to: DTDPGLAQHATNYQLSEVLQAGR*AARMNS
Trigger: AGAGTTCATCCTGGCAGCTCACCGACCTGCCTGCAA...CACTTCAGAGAGCTGGTAGTTAGTAGCATGTTGAGCCAGGCCTGGGTCTGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303562.9
CDS-3UTR TCA 90 bp AGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGCCACTGGGCCTGGATaGTGCTGGGAACAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: RSSLGLQEPSREDVFLLSATGPG*CWEQEV
Trigger: GACTTCCTGTTCCCAGCATCATCCAGGCCCAGTGGC...AGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR TCA 90 bp TCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAAGCTGGGAGTACAGGTaGCCACCGGAGTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: SSLGLQEPSREDVFLLSVSWEYR*PPECTG
Trigger: CCCTGTGCACTCCGGTGGTCACCTGTACTCCCAGCT...TACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR TCA 90 bp ACACATGGATGCTTTCAAGTCCTTGAGGCCCACAGCCTGGTGTGTTTCACGCACCAGCCTCGGGGTAGGTaGAGACGAAGGAAGACGTGT +
Preference number: 4 (lower is better)
Translates to: THGCFQVLEAHSLVCFTHQPRGR*RRRKTC
Trigger: ACACGTCTTCCTTCGTCTTCACCTACCCCGAGGCTG...GTGCGTGAAACACACCAGGCTGTGGGCCTCAAGGACTTGAAAGCATCCATGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR TCA 90 bp GAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCAGCTCGGGCAGCAGCCTCGGGGTAGGTaGAGACGAAGGAAGACGTGT +
Preference number: 4 (lower is better)
Translates to: EPSREDVFLLSVMHQLGQQPRGR*RRRKTC
Trigger: ACACGTCTTCCTTCGTCTTCACCTACCCCGAGGCTG...CTGCCCGAGCTGGTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR TCA 90 bp GCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTGCAGCGTGGGTGAGCTaGGCGAGTCAGAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: AQIRSSLGLQEPSREDVFAAWVS*ASQRKA
Trigger: AGCCTTCCTCTGACTCGCTCAGCTCACCCACGCTGC...AAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR TCA 90 bp CTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACGGCCAGCAGCGTGGGTaGGCTGAGCGAGTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: LGLQEPSREDVFLLSVMHGQQRG*AERVRG
Trigger: TCCTCTGACTCGCTCAGCTCACCCACGCTGCTGGCC...GTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR TCA 90 bp TCCTTGAGGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGGTGAGACTCAGAGTCTaGGTTGGGATGGAATGGGCT +
Preference number: 4 (lower is better)
Translates to: SLRPTAWCVSRTDKVLPRVRLRV*VGMEWA
Trigger: AGCCCATTCCATCCCAACTCAGACTCTGAGTCTCAC...CCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555347.1
CDS-3UTR GCA 90 bp GCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTTCCGTGCAGAAGTCCTaGGCGTTGACAGGCGAGCCC +
Preference number: 4 (lower is better)
Translates to: AQIRSSLGLQEPSREDVFSVQKS*ALTGEP
Trigger: GGGCTCGCCTGTCAACGCGCAGGACTTCTGCACGGA...AAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000535987.5
CDS-3UTR GCA 90 bp GTCACTGGGAACAATACACACTCCATGCGTTTTGCTACATCTCCGGAAGAGGTAGGCTGCACCAGCCACTaGAGGTCCGGACTGGTCGAG +
Preference number: 4 (lower is better)
Translates to: VTGNNTHSMRFATSPEEVGCTSH*RSGLVE
Trigger: CTCGACCAGTCCGGACCTGCAGTGGCTGGTGCAGCC...TACCTCTTCCGGAGATGTAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR GCA 90 bp AGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTCTCCTGCCAATGCTCTaGGCTCGGCCTCCTGTCATG +
Preference number: 4 (lower is better)
Translates to: RSSLGLQEPSREDVFLLSLLPML*ARPPVM
Trigger: CATGACAGGAGGCCGAGCGCAGAGCATTGGCAGGAG...AGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR GCA 90 bp CTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACTGCCCCTCCTGCCAATaGTCTGCGCTCGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LGLQEPSREDVFLLSVMHCPSCQ*SALGLL
Trigger: CAGGAGGCCGAGCGCAGAGCATTGGCAGGAGGGGCA...GTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR GCA 90 bp TGCTACATCTCCGGAAGAGGTAAGGACTTGAGTCCACACATGGATGCTTTCAAGCCACCTTGCCCCTCCTaGCAATGCTCTGCGCTCGGC +
Preference number: 4 (lower is better)
Translates to: CYISGRGKDLSPHMDAFKPPCPS*QCSALG
Trigger: GCCGAGCGCAGAGCATTGGCAGGAGGGGCAAGGTGG...CTTGAAAGCATCCATGTGTGGACTCAAGTCCTTACCTCTTCCGGAGATGTAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR GCA 90 bp GGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGGTCATCAGGGATCTTaGAGGCAGGTCGGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: GVFHAQIRSSLGLQEPSRGHQGS*RQVGEL
Trigger: CAGCTCACCGACCTGCCTGCAAGATCCCTGATGACC...CCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR GCA 90 bp CAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCAGCTCGGGGGTCATCAGGGATCTTaGAGGCAGGTCGGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: QEPSREDVFLLSVMHQLGGHQGS*RQVGEL
Trigger: CAGCTCACCGACCTGCCTGCAAGATCCCTGATGACC...CCCGAGCTGGTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR GCA 90 bp CACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGGGTCATCAGGGATCTTaGAGGCAGGTCGGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: HAQIRSSLGLQEPSREDVGHQGS*RQVGEL
Trigger: CAGCTCACCGACCTGCCTGCAAGATCCCTGATGACC...CACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR GCA 90 bp AAGTCCTTGAGGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTCAGAGGCTCCCAGTCTaGTGCATAGAAGGACCCAGA +
Preference number: 4 (lower is better)
Translates to: KSLRPTAWCVSRTDKVLPQRLPV*CIEGPR
Trigger: TCTGGGTCCTTCTATGCAGCAGACTGGGAGCCTCTG...AGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAAGGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR GCA 90 bp AGTGTCACTGGGAACAATACACACTCCATGCGTTTTGCTACATCTCCGGAAGAGTGCTGCTGCTGCCCTTaGGGTGGGCAGCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: SVTGNNTHSMRFATSPEECCCCP*GGQLHS
Trigger: GCTGTGCAGCTGCCCACCGCAAGGGCAGCAGCAGCA...CTCTTCCGGAGATGTAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR GCA 90 bp AGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTAAGGCTCATTGCTGCTaGTGCCCTTGCGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: RSSLGLQEPSREDVFLLSKAHCC*CPCGGQ
Trigger: CTGCCCACCGCAAGGGCAGCAGCAGCAATGAGCCTT...AGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR GCA 90 bp GTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAAGGAAGGCTCATTGCTaGTGCTGCCCTTGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: VFHAQIRSSLGLQEPSRERKAHC*CCPCGG
Trigger: CCCACCGCAAGGGCAGCAGCAGCAATGAGCCTTCCT...TTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR GCA 90 bp GACACAGACCCAGGCCTGGCTCAACATGCTACTAACTACCAGCTCTCTGAAGTGCAGAGGAAGGCTCATTaGTGCTGCTGCCCTTGCGGT +
Preference number: 4 (lower is better)
Translates to: DTDPGLAQHATNYQLSEVQRKAH*CCCPCG
Trigger: ACCGCAAGGGCAGCAGCAGCAATGAGCCTTCCTCTG...CACTTCAGAGAGCTGGTAGTTAGTAGCATGTTGAGCCAGGCCTGGGTCTGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303562.9
CDS-3UTR GCA 90 bp GAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCAGCTCGGGCAGCAGAGGAAGGCTCATTaGTGCTGCTGCCCTTGCGGT +
Preference number: 4 (lower is better)
Translates to: EPSREDVFLLSVMHQLGQQRKAH*CCCPCG
Trigger: ACCGCAAGGGCAGCAGCAGCAATGAGCCTTCCTCTG...CTGCCCGAGCTGGTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR GCA 90 bp CCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACAGAGGAAGGCTCATTaGTGCTGCTGCCCTTGCGGT +
Preference number: 4 (lower is better)
Translates to: PQPGVFHAQIRSSLGLQEQRKAH*CCCPCG
Trigger: ACCGCAAGGGCAGCAGCAGCAATGAGCCTTCCTCTG...TTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CCA 90 bp GAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCAGCTCGGGCAGCCGAGAACATCATCGTaGCGGTTAGGCAAAGCCGGG +
Preference number: 4 (lower is better)
Translates to: EPSREDVFLLSVMHQLGQPRTSS*RLGKAG
Trigger: CCCGGCTTTGCCTAACCGCCACGATGATGTTCTCGG...CTGCCCGAGCTGGTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000535987.5
CDS-3UTR CCA 90 bp AGTGTCACTGGGAACAATACACACTCCATGCGTTTTGCTACATCTCCGGAAGAGGGCTCTGGTCTGCGATaGGGCCACGGAGGAGACGAG +
Preference number: 4 (lower is better)
Translates to: SVTGNNTHSMRFATSPEEGSGLR*GHGGDE
Trigger: CTCGTCTCCTCCGTGGCCCCATCGCAGACCAGAGCC...CTCTTCCGGAGATGTAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR CCA 90 bp TGCTACATCTCCGGAAGAGGTAAGGACTTGAGTCCACACATGGATGCTTTCAAGAAGGGTGAGGGGCTCTaGTCTGCGATGGGGCCACGG +
Preference number: 4 (lower is better)
Translates to: CYISGRGKDLSPHMDAFKKGEGL*SAMGPR
Trigger: CCGTGGCCCCATCGCAGACCAGAGCCCCTCACCCTT...CTTGAAAGCATCCATGTGTGGACTCAAGTCCTTACCTCTTCCGGAGATGTAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR CCA 90 bp GGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGCACAGACATCTCTTCTaGGAAGCCCAGGTCATCAGG +
Preference number: 4 (lower is better)
Translates to: GPQPGVFHAQIRSSLGLQHRHLF*EAQVIR
Trigger: CCTGATGACCTGGGCTTCCCAGAAGAGATGTCTGTG...CTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CCA 90 bp AGTGTCACTGGGAACAATACACACTCCATGCGTTTTGCTACATCTCCGGAAGAGCGGGGTGGCAACCTCTaGCAGGCCCCCAGTCAGATC +
Preference number: 4 (lower is better)
Translates to: SVTGNNTHSMRFATSPEERGGNL*QAPSQI
Trigger: GATCTGACTGGGGGCCTGCCAGAGGTTGCCACCCCG...CTCTTCCGGAGATGTAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR CCA 90 bp ACACATGGATGCTTTCAAGTCCTTGAGGCCCACAGCCTGGTGTGTTTCACGCACCTGTCTCAGAGCCACTaGGCCTGGATGATGCTGGGA +
Preference number: 4 (lower is better)
Translates to: THGCFQVLEAHSLVCFTHLSQSH*AWMMLG
Trigger: TCCCAGCATCATCCAGGCCCAGTGGCTCTGAGACAG...GTGCGTGAAACACACCAGGCTGTGGGCCTCAAGGACTTGAAAGCATCCATGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR CCA 90 bp GGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGCTGTCTCAGAGCCACTaGGCCTGGATGATGCTGGGA +
Preference number: 4 (lower is better)
Translates to: GVFHAQIRSSLGLQEPSRLSQSH*AWMMLG
Trigger: TCCCAGCATCATCCAGGCCCAGTGGCTCTGAGACAG...CCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CCA 90 bp CTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCACCAGCTCGGGCAGTaGCACTTGTGGGTGCCGGCT +
Preference number: 4 (lower is better)
Translates to: LGLQEPSREDVFLLSVMHHQLGQ*HLWVPA
Trigger: AGCCGGCACCCACAAGTGCCACTGCCCGAGCTGGTG...GTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CCA 90 bp TACACACTCCATGCGTTTTGCTACATCTCCGGAAGAGGTAAGGACTTGAGTCCAGGTTCCGGACACAGGTaGGGCGAGTTCCCAGTGCCG +
Preference number: 4 (lower is better)
Translates to: YTLHAFCYISGRGKDLSPGSGHR*GEFPVP
Trigger: CGGCACTGGGAACTCGCCCCACCTGTGTCCGGAACC...TGGACTCAAGTCCTTACCTCTTCCGGAGATGTAGCAAAACGCATGGAGTGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555686.1
CDS-3UTR TCA 90 bp CACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGCCTCGTAGTCTGCGTTaGAGCCCGAGAACATCATCG +
Preference number: 4 (lower is better)
Translates to: HAQIRSSLGLQEPSREDVPRSLR*SPRTSS
Trigger: CGATGATGTTCTCGGGCTTCAACGCAGACTACGAGG...CACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000535987.5
CDS-3UTR TCA 90 bp CCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCTCGTAGTCTGCGTTaGAGCCCGAGAACATCATCG +
Preference number: 4 (lower is better)
Translates to: PQPGVFHAQIRSSLGLQEPRSLR*SPRTSS
Trigger: CGATGATGTTCTCGGGCTTCAACGCAGACTACGAGG...TTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000535987.5
CDS-3UTR TCA 90 bp GTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAATTGCAGGCAGGTCGGTaGGCTGCCAGGATGAACTCT +
Preference number: 4 (lower is better)
Translates to: VFHAQIRSSLGLQEPSRELQAGR*AARMNS
Trigger: AGAGTTCATCCTGGCAGCTCACCGACCTGCCTGCAA...TTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR TCA 90 bp GGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCAGGCCACTGGGCCTGGATaGTGCTGGGAACAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: GLQEPSREDVFLLSVMHQATGPG*CWEQEV
Trigger: GACTTCCTGTTCCCAGCATCATCCAGGCCCAGTGGC...CTGGTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR TCA 90 bp GCGTTTTGCTACATCTCCGGAAGAGGTAAGGACTTGAGTCCACACATGGATGCTGCCACTGGGCCTGGATaGTGCTGGGAACAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: AFCYISGRGKDLSPHMDAATGPG*CWEQEV
Trigger: GACTTCCTGTTCCCAGCATCATCCAGGCCCAGTGGC...AGCATCCATGTGTGGACTCAAGTCCTTACCTCTTCCGGAGATGTAGCAAAACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR TCA 90 bp GCTACTAACTACCAGCTCTCTGAAGTGTCACTGGGAACAATACACACTCCATGCAGCTGGGAGTACAGGTaGCCACCGGAGTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: ATNYQLSEVSLGTIHTPCSWEYR*PPECTG
Trigger: CCCTGTGCACTCCGGTGGTCACCTGTACTCCCAGCT...GCATGGAGTGTGTATTGTTCCCAGTGACACTTCAGAGAGCTGGTAGTTAGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303562.9
CDS-3UTR TCA 90 bp TACACACTCCATGCGTTTTGCTACATCTCCGGAAGAGGTAAGGACTTGAGTCCAGCAGCGTGGGTGAGCTaGGCGAGTCAGAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: YTLHAFCYISGRGKDLSPAAWVS*ASQRKA
Trigger: AGCCTTCCTCTGACTCGCTCAGCTCACCCACGCTGC...TGGACTCAAGTCCTTACCTCTTCCGGAGATGTAGCAAAACGCATGGAGTGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR TCA 90 bp AGCTCTCTGAAGTGTCACTGGGAACAATACACACTCCATGCGTTTTGCTACATCGGCCAGCAGCGTGGGTaGGCTGAGCGAGTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: SSLKCHWEQYTLHAFCYIGQQRG*AERVRG
Trigger: TCCTCTGACTCGCTCAGCTCACCCACGCTGCTGGCC...GATGTAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGACACTTCAGAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR TCA 90 bp ACACATGGATGCTTTCAAGTCCTTGAGGCCCACAGCCTGGTGTGTTTCACGCACATGCTTTCAAGTCCTTaGGGCCCACAGCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: THGCFQVLEAHSLVCFTHMLSSP*GPQPGV
Trigger: CACACCAGGCTGTGGGCCTCAAGGACTTGAAAGCAT...GTGCGTGAAACACACCAGGCTGTGGGCCTCAAGGACTTGAAAGCATCCATGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR TCA 90 bp GGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGATGCTTTCAAGTCCTTaGGGCCCACAGCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: GVFHAQIRSSLGLQEPSRMLSSP*GPQPGV
Trigger: CACACCAGGCTGTGGGCCTCAAGGACTTGAAAGCAT...CCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR GCA 90 bp AACAAAGAAGAGCCCAGTCTGAAAGCATGCGGTAAGAAACTTAGGGAAGAAACTTCACTGCTCGTTCGCTaGGCCGCGGCCGCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: NKEEPSLKACGKKLREETSLLVR*AAAAGS
Trigger: TGAGCCGGCGGCCGCGGCGCAGCGAACGAGCAGTGA...AGTTTCTTCCCTAAGTTTCTTACCGCATGCTTTCAGACTGGGCTCTTCTTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554617.1
CDS-3UTR GCA 90 bp AGCTCTCTGAAGTGTCACTGGGAACAATACACACTCCATGCGTTTTGCTACATCCCACCTTGCCCCTCCTaGCAATGCTCTGCGCTCGGC +
Preference number: 4 (lower is better)
Translates to: SSLKCHWEQYTLHAFCYIPPCPS*QCSALG
Trigger: GCCGAGCGCAGAGCATTGGCAGGAGGGGCAAGGTGG...GATGTAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGACACTTCAGAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR GCA 90 bp AGCATAAGACACAGTCTTACTCAAGGGCCCTTATGCTCAATCTCCAACTTTCCCCCACCTTGCCCCTCCTaGCAATGCTCTGCGCTCGGC +
Preference number: 4 (lower is better)
Translates to: SIRHSLTQGPLCSISNFPPPCPS*QCSALG
Trigger: GCCGAGCGCAGAGCATTGGCAGGAGGGGCAAGGTGG...GGGAAAGTTGGAGATTGAGCATAAGGGCCCTTGAGTAAGACTGTGTCTTATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555242.1
CDS-3UTR GCA 90 bp ACACATGGATGCTTTCAAGTCCTTGAGGCCCACAGCCTGGTGTGTTTCACGCACCAGAGGCTCCCAGTCTaGTGCATAGAAGGACCCAGA +
Preference number: 4 (lower is better)
Translates to: THGCFQVLEAHSLVCFTHQRLPV*CIEGPR
Trigger: TCTGGGTCCTTCTATGCAGCAGACTGGGAGCCTCTG...GTGCGTGAAACACACCAGGCTGTGGGCCTCAAGGACTTGAAAGCATCCATGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR GCA 90 bp CACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGCAGAGGCTCCCAGTCTaGTGCATAGAAGGACCCAGA +
Preference number: 4 (lower is better)
Translates to: HAQIRSSLGLQEPSREDVQRLPV*CIEGPR
Trigger: TCTGGGTCCTTCTATGCAGCAGACTGGGAGCCTCTG...CACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR GCA 90 bp AGCTCTCTGAAGTGTCACTGGGAACAATACACACTCCATGCGTTTTGCTACATCAGTGGCACTTGTGGGTaGCGGCTGCCTCCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: SSLKCHWEQYTLHAFCYISGTCG*RLPPLP
Trigger: GGGAAGGGGAGGCAGCCGGCACCCACAAGTGCCACT...GATGTAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGACACTTCAGAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR GCA 90 bp AAGTCCTTGAGGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTGTTCCCAGTGCCGCATaGAGCAGTGAAGAGAAACGA +
Preference number: 4 (lower is better)
Translates to: KSLRPTAWCVSRTDKVLPVPSAA*SSEEKR
Trigger: TCGTTTCTCTTCACTGCTGCATGCGGCACTGGGAAC...AGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAAGGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555686.1
CDS-3UTR CCA 90 bp GCTACTAACTACCAGCTCTCTGAAGTGTCACTGGGAACAATACACACTCCATGCCAGGCGAGCCCATGCTaGAGAAGGAGTCTGCGGGTG +
Preference number: 4 (lower is better)
Translates to: ATNYQLSEVSLGTIHTPCQASPC*RRSLRV
Trigger: CACCCGCAGACTCCTTCTCCAGCATGGGCTCGCCTG...GCATGGAGTGTGTATTGTTCCCAGTGACACTTCAGAGAGCTGGTAGTTAGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303562.9
CDS-3UTR CCA 90 bp TCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTACTCGGCCTCCTGTCATaGTCTTCACAACGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: SSLGLQEPSREDVFLLSVLGLLS*SSQRQP
Trigger: GGGCTGGCGTTGTGAAGACCATGACAGGAGGCCGAG...TACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR CCA 90 bp CTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCAGCTCCTCGGCCTCCTGTCATaGTCTTCACAACGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: LQEPSREDVFLLSVMHQLLGLLS*SSQRQP
Trigger: GGGCTGGCGTTGTGAAGACCATGACAGGAGGCCGAG...GAGCTGGTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR CCA 90 bp TTGAGGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTTCCGGTTGCGGCATTTaGCTGCAGCCATCTTATTCC +
Preference number: 4 (lower is better)
Translates to: LRPTAWCVSRTDKVLPRSSGCGI*LQPSYS
Trigger: GGAATAAGATGGCTGCAGCCAAATGCCGCAACCGGA...AGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CCA 90 bp GCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTCCGGTTGCGGCATTTaGCTGCAGCCATCTTATTCC +
Preference number: 4 (lower is better)
Translates to: AWCVSRTDKVLPRSTGTLSGCGI*LQPSYS
Trigger: GGAATAAGATGGCTGCAGCCAAATGCCGCAACCGGA...GAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CCA 90 bp TACCAGCTCTCTGAAGTGTCACTGGGAACAATACACACTCCATGCGTTTTGCTACACCAGCTCGGGCAGTaGCACTTGTGGGTGCCGGCT +
Preference number: 4 (lower is better)
Translates to: YQLSEVSLGTIHTPCVLLHQLGQ*HLWVPA
Trigger: AGCCGGCACCCACAAGTGCCACTGCCCGAGCTGGTG...TAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGACACTTCAGAGAGCTGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR CCA 90 bp CACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGAGCCAGCCCCATCAGTaGCTTCATCCTCTGTACTGG +
Preference number: 4 (lower is better)
Translates to: HAQIRSSLGLQEPSREDVSQPHQ*LHPLYW
Trigger: CCAGTACAGAGGATGAAGCCACTGATGGGGCTGGCT...CACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555347.1
CDS-3UTR CCA 90 bp GAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCAGCTCGGGCAGGAGTCTGAGTTGGGATaGAATGGGCTTGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: EPSREDVFLLSVMHQLGQESELG*NGLGAR
Trigger: CCTGGCTCCAAGCCCATTCCATCCCAACTCAGACTC...CTGCCCGAGCTGGTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555347.1
CDS-3UTR TCA 90 bp AGCATAAGACACAGTCTTACTCAAGGGCCCTTATGCTCAATCTCCAACTTTCCCAGAAGTCCTGCGCGTTaGCAGGCGAGCCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: SIRHSLTQGPLCSISNFPRSPAR*QASPCW
Trigger: CCAGCATGGGCTCGCCTGTCAACGCGCAGGACTTCT...GGGAAAGTTGGAGATTGAGCATAAGGGCCCTTGAGTAAGACTGTGTCTTATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555242.1
CDS-3UTR TCA 90 bp CATAAGACACAGTCTTACTCAAGGGCCCTTATGCTCAATCTCCAACTTTCCCCTGGGACTCCGAAAGGGTaGGGGGCTCTGGTCTGCGAT +
Preference number: 4 (lower is better)
Translates to: HKTQSYSRALMLNLQLSPGTPKG*GALVCD
Trigger: ATCGCAGACCAGAGCCCCTCACCCTTTCGGAGTCCC...AGGGGAAAGTTGGAGATTGAGCATAAGGGCCCTTGAGTAAGACTGTGTCTTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555242.1
CDS-3UTR TCA 90 bp TCCTTGAGGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGGGTGAGCTGCCAGGATaGACTCTAGTTTTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SLRPTAWCVSRTDKVLPRGELPG*TLVFPS
Trigger: AGAAGGAAAAACTAGAGTTCATCCTGGCAGCTCACC...CCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR TCA 90 bp TCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTATTGCAGGCAGGTCGGTaGGCTGCCAGGATGAACTCT +
Preference number: 4 (lower is better)
Translates to: SSLGLQEPSREDVFLLSVLQAGR*AARMNS
Trigger: AGAGTTCATCCTGGCAGCTCACCGACCTGCCTGCAA...TACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR TCA 90 bp GCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCAGCCTCGGGGTAGGTaGAGACGAAGGAAGACGTGT +
Preference number: 4 (lower is better)
Translates to: AQIRSSLGLQEPSREDVFQPRGR*RRRKTC
Trigger: ACACGTCTTCCTTCGTCTTCACCTACCCCGAGGCTG...AAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR TCA 90 bp TCCTTGAGGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGGAAGAGGTAAGGACTTaGGTCCACACATGGATGCTT +
Preference number: 4 (lower is better)
Translates to: SLRPTAWCVSRTDKVLPREEVRT*VHTWML
Trigger: AAGCATCCATGTGTGGACTCAAGTCCTTACCTCTTC...CCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR TCA 90 bp TACCAGCTCTCTGAAGTGTCACTGGGAACAATACACACTCCATGCGTTTTGCTAAGGGGAAAGCCGACGTaGGCGAGCAGGTTCCGGACA +
Preference number: 4 (lower is better)
Translates to: YQLSEVSLGTIHTPCVLLRGKPT*ASRFRT
Trigger: TGTCCGGAACCTGCTCGCTCACGTCGGCTTTCCCCT...TAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGACACTTCAGAGAGCTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555686.1
CDS-3UTR GCA 90 bp AGACACAGTCTTACTCAAGGGCCCTTATGCTCAATCTCCAACTTTCCCCTTAAGTCCGTGCAGAAGTCCTaGGCGTTGACAGGCGAGCCC +
Preference number: 4 (lower is better)
Translates to: RHSLTQGPLCSISNFPLKSVQKS*ALTGEP
Trigger: GGGCTCGCCTGTCAACGCGCAGGACTTCTGCACGGA...CTTAAGGGGAAAGTTGGAGATTGAGCATAAGGGCCCTTGAGTAAGACTGTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555242.1
CDS-3UTR GCA 90 bp AACAAAGAAGAGCCCAGTCTGAAAGCATGCGGTAAGAAACTTAGGGAAGAAACTGAGACGAGGGCGGGCTaGACCAGCCACTGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: NKEEPSLKACGKKLREETETRAG*TSHCRS
Trigger: GGACCTGCAGTGGCTGGTGCAGCCCGCCCTCGTCTC...AGTTTCTTCCCTAAGTTTCTTACCGCATGCTTTCAGACTGGGCTCTTCTTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554617.1
CDS-3UTR GCA 90 bp ATAAAGGAAAGCATAAGACACAGTCTTACTCAAGGGCCCTTATGCTCAATCTCCGAGACGAGGGCGGGCTaGACCAGCCACTGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: IKESIRHSLTQGPLCSISETRAG*TSHCRS
Trigger: GGACCTGCAGTGGCTGGTGCAGCCCGCCCTCGTCTC...GGAGATTGAGCATAAGGGCCCTTGAGTAAGACTGTGTCTTATGCTTTCCTTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555242.1
CDS-3UTR GCA 90 bp GCTACTAACTACCAGCTCTCTGAAGTGTCACTGGGAACAATACACACTCCATGCCTCCTGCCAATGCTCTaGGCTCGGCCTCCTGTCATG +
Preference number: 4 (lower is better)
Translates to: ATNYQLSEVSLGTIHTPCLLPML*ARPPVM
Trigger: CATGACAGGAGGCCGAGCGCAGAGCATTGGCAGGAG...GCATGGAGTGTGTATTGTTCCCAGTGACACTTCAGAGAGCTGGTAGTTAGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303562.9
CDS-3UTR GCA 90 bp TGTCACTGGGAACAATACACACTCCATGCGTTTTGCTACATCTCCGGAAGAGGTCTCCTGCCAATGCTCTaGGCTCGGCCTCCTGTCATG +
Preference number: 4 (lower is better)
Translates to: CHWEQYTLHAFCYISGRGLLPML*ARPPVM
Trigger: CATGACAGGAGGCCGAGCGCAGAGCATTGGCAGGAG...ACCTCTTCCGGAGATGTAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR GCA 90 bp AAGGAAAGCATAAGACACAGTCTTACTCAAGGGCCCTTATGCTCAATCTCCAACTGCCCCTCCTGCCAATaGTCTGCGCTCGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: KESIRHSLTQGPLCSISNCPSCQ*SALGLL
Trigger: CAGGAGGCCGAGCGCAGAGCATTGGCAGGAGGGGCA...GTTGGAGATTGAGCATAAGGGCCCTTGAGTAAGACTGTGTCTTATGCTTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555242.1
CDS-3UTR GCA 90 bp TGTCACTGGGAACAATACACACTCCATGCGTTTTGCTACATCTCCGGAAGAGGTAGGAAGGCTCATTGCTaGTGCTGCCCTTGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: CHWEQYTLHAFCYISGRGRKAHC*CCPCGG
Trigger: CCCACCGCAAGGGCAGCAGCAGCAATGAGCCTTCCT...ACCTCTTCCGGAGATGTAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR GCA 90 bp TTGAGGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTGAGTCCACACATGGATaGTTTCAAGTCCTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: LRPTAWCVSRTDKVLPRSESTHG*FQVLEA
Trigger: GGCCTCAAGGACTTGAAAGCATCCATGTGTGGACTC...AGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR GCA 90 bp GGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGTTTCTGACCTGCAGTTaGAGACTAGGTGTGACTTGC +
Preference number: 4 (lower is better)
Translates to: GPQPGVFHAQIRSSLGLQFLTCS*RLGVTC
Trigger: GCAAGTCACACCTAGTCTGCAACTGCAGGTCAGAAA...CTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555347.1
CDS-3UTR CCA 90 bp GTCACTGGGAACAATACACACTCCATGCGTTTTGCTACATCTCCGGAAGAGGTAGCTGTGGAGCAGAGCTaGGTAGGAGCACGGTCACTG +
Preference number: 4 (lower is better)
Translates to: VTGNNTHSMRFATSPEEVAVEQS*VGARSL
Trigger: CAGTGACCGTGCTCCTACCCAGCTCTGCTCCACAGC...TACCTCTTCCGGAGATGTAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303562.9
CDS-3UTR CCA 90 bp AAGGAAAGCATAAGACACAGTCTTACTCAAGGGCCCTTATGCTCAATCTCCAACAAGGGTGAGGGGCTCTaGTCTGCGATGGGGCCACGG +
Preference number: 4 (lower is better)
Translates to: KESIRHSLTQGPLCSISNKGEGL*SAMGPR
Trigger: CCGTGGCCCCATCGCAGACCAGAGCCCCTCACCCTT...GTTGGAGATTGAGCATAAGGGCCCTTGAGTAAGACTGTGTCTTATGCTTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555242.1
CDS-3UTR CCA 90 bp CATAAGACACAGTCTTACTCAAGGGCCCTTATGCTCAATCTCCAACTTTCCCCTTCACAACGCCAGCCCTaGAGTAAGCCCCAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: HKTQSYSRALMLNLQLSPSQRQP*SKPQRR
Trigger: CCTCCGCTGGGGCTTACTCCAGGGCTGGCGTTGTGA...AGGGGAAAGTTGGAGATTGAGCATAAGGGCCCTTGAGTAAGACTGTGTCTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555242.1
CDS-3UTR CCA 90 bp GGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGTCCGGTTGCGGCATTTaGCTGCAGCCATCTTATTCC +
Preference number: 4 (lower is better)
Translates to: GVFHAQIRSSLGLQEPSRSGCGI*LQPSYS
Trigger: GGAATAAGATGGCTGCAGCCAAATGCCGCAACCGGA...CCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CCA 90 bp GAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCAGCTCGGGCAGTGGTCTGTCTCCGCTTaGAGTGTATCAGTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: EPSREDVFLLSVMHQLGQWSVSA*SVSVSS
Trigger: GGAGCTGACTGATACACTCCAAGCGGAGACAGACCA...CTGCCCGAGCTGGTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CCA 90 bp GGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGTGGTCTGTCTCCGCTTaGAGTGTATCAGTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GVFHAQIRSSLGLQEPSRWSVSA*SVSVSS
Trigger: GGAGCTGACTGATACACTCCAAGCGGAGACAGACCA...CCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CCA 90 bp GAGACACAGACCCAGGCCTGGCTCAACATGCTACTAACTACCAGCTCTCTGAAGCACAGACATCTCTTCTaGGAAGCCCAGGTCATCAGG +
Preference number: 4 (lower is better)
Translates to: ETQTQAWLNMLLTTSSLKHRHLF*EAQVIR
Trigger: CCTGATGACCTGGGCTTCCCAGAAGAGATGTCTGTG...CTTCAGAGAGCTGGTAGTTAGTAGCATGTTGAGCCAGGCCTGGGTCTGTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303562.9
CDS-3UTR CCA 90 bp CACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGCACAGACATCTCTTCTaGGAAGCCCAGGTCATCAGG +
Preference number: 4 (lower is better)
Translates to: HAQIRSSLGLQEPSREDVHRHLF*EAQVIR
Trigger: CCTGATGACCTGGGCTTCCCAGAAGAGATGTCTGTG...CACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CCA 90 bp CTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCAGCTCCTGTCTCAGAGCCACTaGGCCTGGATGATGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LQEPSREDVFLLSVMHQLLSQSH*AWMMLG
Trigger: TCCCAGCATCATCCAGGCCCAGTGGCTCTGAGACAG...GAGCTGGTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CCA 90 bp ACACATGGATGCTTTCAAGTCCTTGAGGCCCACAGCCTGGTGTGTTTCACGCACTTGAGGCCCACAGCCTaGTGTGTTTCACGCACAGAT +
Preference number: 4 (lower is better)
Translates to: THGCFQVLEAHSLVCFTHLRPTA*CVSRTD
Trigger: ATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAA...GTGCGTGAAACACACCAGGCTGTGGGCCTCAAGGACTTGAAAGCATCCATGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR CCA 90 bp TCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAGGGATGGAATGGGCTTaGAGCCAGGGCTCCCAGTTA +
Preference number: 4 (lower is better)
Translates to: SSLGLQEPSREDVFLLSVGMEWA*SQGSQL
Trigger: TAACTGGGAGCCCTGGCTCCAAGCCCATTCCATCCC...TACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555347.1
CDS-3UTR TCA 90 bp TCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAGAAGGAGTCTGCGGGTaGGTGGTAGTAAGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: SSLGLQEPSREDVFLLSVEGVCG*VVVREA
Trigger: AGCCTCTCTTACTACCACTCACCCGCAGACTCCTTC...TACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000535987.5
CDS-3UTR TCA 90 bp GAGCCCAGTCTGAAAGCATGCGGTAAGAAACTTAGGGAAGAAACTATGAGAGTAGGGACTCCGAAAGGGTaGGGGGCTCTGGTCTGCGAT +
Preference number: 4 (lower is better)
Translates to: EPSLKACGKKLREETMRVGTPKG*GALVCD
Trigger: ATCGCAGACCAGAGCCCCTCACCCTTTCGGAGTCCC...TACTCTCATAGTTTCTTCCCTAAGTTTCTTACCGCATGCTTTCAGACTGGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554617.1
CDS-3UTR TCA 90 bp TTGAGGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTGGTGAGCTGCCAGGATaGACTCTAGTTTTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LRPTAWCVSRTDKVLPRSGELPG*TLVFPS
Trigger: AGAAGGAAAAACTAGAGTTCATCCTGGCAGCTCACC...AGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR TCA 90 bp TACCAGCTCTCTGAAGTGTCACTGGGAACAATACACACTCCATGCGTTTTGCTACTTGACAGGTTCCACTaGGGGCTTGGGCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: YQLSEVSLGTIHTPCVLLLDRFH*GLGLRV
Trigger: GACCCTGAGCCCAAGCCCTCAGTGGAACCTGTCAAG...TAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGACACTTCAGAGAGCTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR TCA 90 bp GCGTTTTGCTACATCTCCGGAAGAGGTAAGGACTTGAGTCCACACATGGATGCTGTCCCTCATCCTGGATaGAAGGTCTCCCCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: AFCYISGRGKDLSPHMDAVPHPG*KVSPFS
Trigger: GGAAAAGGGGGAGACCTTTCATCCAGGATGAGGGAC...AGCATCCATGTGTGGACTCAAGTCCTTACCTCTTCCGGAGATGTAGCAAAACGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555686.1
CDS-3UTR TCA 90 bp GCGTTTTGCTACATCTCCGGAAGAGGTAAGGACTTGAGTCCACACATGGATGCTTGCCGCATGCAGCAGTaGAGAGAAACGATCCTGCCA +
Preference number: 4 (lower is better)
Translates to: AFCYISGRGKDLSPHMDACRMQQ*RETILP
Trigger: TGGCAGGATCGTTTCTCTTCACTGCTGCATGCGGCA...AGCATCCATGTGTGGACTCAAGTCCTTACCTCTTCCGGAGATGTAGCAAAACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555686.1
CDS-3UTR GCA 90 bp GAGCCCAGTCTGAAAGCATGCGGTAAGAAACTTAGGGAAGAAACTATGAGAGTATCCGTGCAGAAGTCCTaGGCGTTGACAGGCGAGCCC +
Preference number: 4 (lower is better)
Translates to: EPSLKACGKKLREETMRVSVQKS*ALTGEP
Trigger: GGGCTCGCCTGTCAACGCGCAGGACTTCTGCACGGA...TACTCTCATAGTTTCTTCCCTAAGTTTCTTACCGCATGCTTTCAGACTGGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554617.1
CDS-3UTR GCA 90 bp AACAAAGAAGAGCCCAGTCTGAAAGCATGCGGTAAGAAACTTAGGGAAGAAACTGGCTGCACCAGCCACTaGAGGTCCGGACTGGTCGAG +
Preference number: 4 (lower is better)
Translates to: NKEEPSLKACGKKLREETGCTSH*RSGLVE
Trigger: CTCGACCAGTCCGGACCTGCAGTGGCTGGTGCAGCC...AGTTTCTTCCCTAAGTTTCTTACCGCATGCTTTCAGACTGGGCTCTTCTTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554617.1
CDS-3UTR GCA 90 bp GATAAAGGAAAGCATAAGACACAGTCTTACTCAAGGGCCCTTATGCTCAATCTCGGCTGCACCAGCCACTaGAGGTCCGGACTGGTCGAG +
Preference number: 4 (lower is better)
Translates to: DKGKHKTQSYSRALMLNLGCTSH*RSGLVE
Trigger: CTCGACCAGTCCGGACCTGCAGTGGCTGGTGCAGCC...GAGATTGAGCATAAGGGCCCTTGAGTAAGACTGTGTCTTATGCTTTCCTTTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555242.1
CDS-3UTR GCA 90 bp CCCAGTCTGAAAGCATGCGGTAAGAAACTTAGGGAAGAAACTATGAGAGTACTTTGCCCCTCCTGCCAATaGTCTGCGCTCGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: PSLKACGKKLREETMRVLCPSCQ*SALGLL
Trigger: CAGGAGGCCGAGCGCAGAGCATTGGCAGGAGGGGCA...AAGTACTCTCATAGTTTCTTCCCTAAGTTTCTTACCGCATGCTTTCAGACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554617.1
CDS-3UTR GCA 90 bp CCCAGTCTGAAAGCATGCGGTAAGAAACTTAGGGAAGAAACTATGAGAGTACTTCCACCTTGCCCCTCCTaGCAATGCTCTGCGCTCGGC +
Preference number: 4 (lower is better)
Translates to: PSLKACGKKLREETMRVLPPCPS*QCSALG
Trigger: GCCGAGCGCAGAGCATTGGCAGGAGGGGCAAGGTGG...AAGTACTCTCATAGTTTCTTCCCTAAGTTTCTTACCGCATGCTTTCAGACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554617.1
CDS-3UTR GCA 90 bp CAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCAGCTCGGGATAACTGTTCCACCTTaGCCCTCCTGCCAATGCTCT +
Preference number: 4 (lower is better)
Translates to: QEPSREDVFLLSVMHQLGITVPP*PSCQCS
Trigger: AGAGCATTGGCAGGAGGGGCAAGGTGGAACAGTTAT...CCCGAGCTGGTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR GCA 90 bp CACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGGAGTCCACACATGGATaGTTTCAAGTCCTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: HAQIRSSLGLQEPSREDVESTHG*FQVLEA
Trigger: GGCCTCAAGGACTTGAAAGCATCCATGTGTGGACTC...CACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR GCA 90 bp GTCACTGGGAACAATACACACTCCATGCGTTTTGCTACATCTCCGGAAGAGGTACATTCCGCAGCGCAGTaGCTGTCTCTTCCATCCTGC +
Preference number: 4 (lower is better)
Translates to: VTGNNTHSMRFATSPEEVHSAAQ*LSLPSC
Trigger: GCAGGATGGAAGAGACAGGCACTGCGCTGCGGAATG...TACCTCTTCCGGAGATGTAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555686.1
CDS-3UTR GCA 90 bp GGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGAGACGGCCAGGTCCGTaGAGAAGTCCTAGAACAAAA +
Preference number: 4 (lower is better)
Translates to: GVFHAQIRSSLGLQEPSRRRPGP*RSPRTK
Trigger: TTTTGTTCTAGGACTTCTGCACGGACCTGGCCGTCT...CCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555686.1
CDS-3UTR GCA 90 bp ACACTCCATGCGTTTTGCTACATCTCCGGAAGAGGTAAGGACTTGAGTCCACACCTTCCATCCTGCCGCTaGGTTCCCGTTATCCCTTCA +
Preference number: 4 (lower is better)
Translates to: TLHAFCYISGRGKDLSPHLPSCR*VPVIPS
Trigger: TGAAGGGATAACGGGAACGCAGCGGCAGGATGGAAG...GTGTGGACTCAAGTCCTTACCTCTTCCGGAGATGTAGCAAAACGCATGGAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555686.1
CDS-3UTR CCA 90 bp TGTCACTGGGAACAATACACACTCCATGCGTTTTGCTACATCTCCGGAAGAGGTCCGAGAACATCATCGTaGCGGTTAGGCAAAGCCGGG +
Preference number: 4 (lower is better)
Translates to: CHWEQYTLHAFCYISGRGPRTSS*RLGKAG
Trigger: CCCGGCTTTGCCTAACCGCCACGATGATGTTCTCGG...ACCTCTTCCGGAGATGTAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303562.9
CDS-3UTR CCA 90 bp AACAAAGAAGAGCCCAGTCTGAAAGCATGCGGTAAGAAACTTAGGGAAGAAACTGGCTCTGGTCTGCGATaGGGCCACGGAGGAGACGAG +
Preference number: 4 (lower is better)
Translates to: NKEEPSLKACGKKLREETGSGLR*GHGGDE
Trigger: CTCGTCTCCTCCGTGGCCCCATCGCAGACCAGAGCC...AGTTTCTTCCCTAAGTTTCTTACCGCATGCTTTCAGACTGGGCTCTTCTTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554617.1
CDS-3UTR CCA 90 bp AAAGGAAAGCATAAGACACAGTCTTACTCAAGGGCCCTTATGCTCAATCTCCAAGGCTCTGGTCTGCGATaGGGCCACGGAGGAGACGAG +
Preference number: 4 (lower is better)
Translates to: KGKHKTQSYSRALMLNLQGSGLR*GHGGDE
Trigger: CTCGTCTCCTCCGTGGCCCCATCGCAGACCAGAGCC...TTGGAGATTGAGCATAAGGGCCCTTGAGTAAGACTGTGTCTTATGCTTTCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555242.1
CDS-3UTR CCA 90 bp AACAAAGAAGAGCCCAGTCTGAAAGCATGCGGTAAGAAACTTAGGGAAGAAACTAAGGGTGAGGGGCTCTaGTCTGCGATGGGGCCACGG +
Preference number: 4 (lower is better)
Translates to: NKEEPSLKACGKKLREETKGEGL*SAMGPR
Trigger: CCGTGGCCCCATCGCAGACCAGAGCCCCTCACCCTT...AGTTTCTTCCCTAAGTTTCTTACCGCATGCTTTCAGACTGGGCTCTTCTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554617.1
CDS-3UTR CCA 90 bp TGCTACATCTCCGGAAGAGGTAAGGACTTGAGTCCACACATGGATGCTTTCAAGCTGTCTCAGAGCCACTaGGCCTGGATGATGCTGGGA +
Preference number: 4 (lower is better)
Translates to: CYISGRGKDLSPHMDAFKLSQSH*AWMMLG
Trigger: TCCCAGCATCATCCAGGCCCAGTGGCTCTGAGACAG...CTTGAAAGCATCCATGTGTGGACTCAAGTCCTTACCTCTTCCGGAGATGTAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR CCA 90 bp GCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTAGCTTCCCTGCTTCCTaGCACCCCACTGTGAAACCA +
Preference number: 4 (lower is better)
Translates to: AQIRSSLGLQEPSREDVFSFPAS*HPTVKP
Trigger: TGGTTTCACAGTGGGGTGCCAGGAAGCAGGGAAGCT...AAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555347.1
CDS-3UTR TCA 90 bp TACACACTCCATGCGTTTTGCTACATCTCCGGAAGAGGTAAGGACTTGAGTCCAGAAGGAGTCTGCGGGTaGGTGGTAGTAAGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: YTLHAFCYISGRGKDLSPEGVCG*VVVREA
Trigger: AGCCTCTCTTACTACCACTCACCCGCAGACTCCTTC...TGGACTCAAGTCCTTACCTCTTCCGGAGATGTAGCAAAACGCATGGAGTGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303562.9
CDS-3UTR TCA 90 bp CCCAGTCTGAAAGCATGCGGTAAGAAACTTAGGGAAGAAACTATGAGAGTACTTAGAAGTCCTGCGCGTTaGCAGGCGAGCCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: PSLKACGKKLREETMRVLRSPAR*QASPCW
Trigger: CCAGCATGGGCTCGCCTGTCAACGCGCAGGACTTCT...AAGTACTCTCATAGTTTCTTCCCTAAGTTTCTTACCGCATGCTTTCAGACTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554617.1
CDS-3UTR TCA 90 bp TACCAGCTCTCTGAAGTGTCACTGGGAACAATACACACTCCATGCGTTTTGCTACAGCCTCGGGGTAGGTaGAGACGAAGGAAGACGTGT +
Preference number: 4 (lower is better)
Translates to: YQLSEVSLGTIHTPCVLLQPRGR*RRRKTC
Trigger: ACACGTCTTCCTTCGTCTTCACCTACCCCGAGGCTG...TAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGACACTTCAGAGAGCTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR TCA 90 bp GTCACTGGGAACAATACACACTCCATGCGTTTTGCTACATCTCCGGAAGAGGTAATGCTTTCAAGTCCTTaGGGCCCACAGCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: VTGNNTHSMRFATSPEEVMLSSP*GPQPGV
Trigger: CACACCAGGCTGTGGGCCTCAAGGACTTGAAAGCAT...TACCTCTTCCGGAGATGTAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR TCA 90 bp CACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGGAAGAGGTAAGGACTTaGGTCCACACATGGATGCTT +
Preference number: 4 (lower is better)
Translates to: HAQIRSSLGLQEPSREDVEEVRT*VHTWML
Trigger: AAGCATCCATGTGTGGACTCAAGTCCTTACCTCTTC...CACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR TCA 90 bp GAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCAGCTCGGGCAGAAGAAGAGCCCAGTCTaGAAGCATGCGGTAAGAAAC +
Preference number: 4 (lower is better)
Translates to: EPSREDVFLLSVMHQLGQKKSPV*KHAVRN
Trigger: GTTTCTTACCGCATGCTTTCAGACTGGGCTCTTCTT...CTGCCCGAGCTGGTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555347.1
CDS-3UTR GCA 90 bp GAGCCCAGTCTGAAAGCATGCGGTAAGAAACTTAGGGAAGAAACTATGAGAGTATCTGTACTGGGCTCCTaGATCTCCGGGGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: EPSLKACGKKLREETMRVSVLGS*ISGAAS
Trigger: GGAAGCAGCCCCGGAGATGCAGGAGCCCAGTACAGA...TACTCTCATAGTTTCTTCCCTAAGTTTCTTACCGCATGCTTTCAGACTGGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554617.1
CDS-3UTR GCA 90 bp TGTCACTGGGAACAATACACACTCCATGCGTTTTGCTACATCTCCGGAAGAGGTCTGTCTCTTCCATCCTaGCGCTGCGTTCCCGTTATC +
Preference number: 4 (lower is better)
Translates to: CHWEQYTLHAFCYISGRGLSLPS*RCVPVI
Trigger: GATAACGGGAACGCAGCGGCAGGATGGAAGAGACAG...ACCTCTTCCGGAGATGTAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555686.1
CDS-3UTR CCA 90 bp CCCAGTCTGAAAGCATGCGGTAAGAAACTTAGGGAAGAAACTATGAGAGTACTTCAGGCGAGCCCATGCTaGAGAAGGAGTCTGCGGGTG +
Preference number: 4 (lower is better)
Translates to: PSLKACGKKLREETMRVLQASPC*RRSLRV
Trigger: CACCCGCAGACTCCTTCTCCAGCATGGGCTCGCCTG...AAGTACTCTCATAGTTTCTTCCCTAAGTTTCTTACCGCATGCTTTCAGACTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554617.1
CDS-3UTR CCA 90 bp GAAAGCATAAGACACAGTCTTACTCAAGGGCCCTTATGCTCAATCTCCAACTTTCAGGCGAGCCCATGCTaGAGAAGGAGTCTGCGGGTG +
Preference number: 4 (lower is better)
Translates to: ESIRHSLTQGPLCSISNFQASPC*RRSLRV
Trigger: CACCCGCAGACTCCTTCTCCAGCATGGGCTCGCCTG...AAAGTTGGAGATTGAGCATAAGGGCCCTTGAGTAAGACTGTGTCTTATGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555242.1
CDS-3UTR CCA 90 bp CCCAGTCTGAAAGCATGCGGTAAGAAACTTAGGGAAGAAACTATGAGAGTACTTTCACAACGCCAGCCCTaGAGTAAGCCCCAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: PSLKACGKKLREETMRVLSQRQP*SKPQRR
Trigger: CCTCCGCTGGGGCTTACTCCAGGGCTGGCGTTGTGA...AAGTACTCTCATAGTTTCTTCCCTAAGTTTCTTACCGCATGCTTTCAGACTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554617.1
CDS-3UTR CCA 90 bp GAGCCCAGTCTGAAAGCATGCGGTAAGAAACTTAGGGAAGAAACTATGAGAGTACTCGGCCTCCTGTCATaGTCTTCACAACGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: EPSLKACGKKLREETMRVLGLLS*SSQRQP
Trigger: GGGCTGGCGTTGTGAAGACCATGACAGGAGGCCGAG...TACTCTCATAGTTTCTTCCCTAAGTTTCTTACCGCATGCTTTCAGACTGGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554617.1
CDS-3UTR CCA 90 bp GGAAAGCATAAGACACAGTCTTACTCAAGGGCCCTTATGCTCAATCTCCAACTTCTCGGCCTCCTGTCATaGTCTTCACAACGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: GKHKTQSYSRALMLNLQLLGLLS*SSQRQP
Trigger: GGGCTGGCGTTGTGAAGACCATGACAGGAGGCCGAG...AAGTTGGAGATTGAGCATAAGGGCCCTTGAGTAAGACTGTGTCTTATGCTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555242.1
CDS-3UTR CCA 90 bp GGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCAGTTGAGGCCCACAGCCTaGTGTGTTTCACGCACAGAT +
Preference number: 4 (lower is better)
Translates to: GLQEPSREDVFLLSVMHQLRPTA*CVSRTD
Trigger: ATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAA...CTGGTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CCA 90 bp GCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTTTGAGGCCCACAGCCTaGTGTGTTTCACGCACAGAT +
Preference number: 4 (lower is better)
Translates to: AQIRSSLGLQEPSREDVFLRPTA*CVSRTD
Trigger: ATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAA...AAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CCA 90 bp AGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTACACAGACCCAGGCCTaGCTCAACATGCTACTAACT +
Preference number: 4 (lower is better)
Translates to: RSSLGLQEPSREDVFLLSTQTQA*LNMLLT
Trigger: AGTTAGTAGCATGTTGAGCCAGGCCTGGGTCTGTGT...AGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303562.9
CDS-3UTR TCA 90 bp GACACAGTCTTACTCAAGGGCCCTTATGCTCAATCTCCAACTTTCCCCTTAAGTCCTCGTAGTCTGCGTTaGAGCCCGAGAACATCATCG +
Preference number: 4 (lower is better)
Translates to: DTVLLKGPYAQSPTFPLSPRSLR*SPRTSS
Trigger: CGATGATGTTCTCGGGCTTCAACGCAGACTACGAGG...ACTTAAGGGGAAAGTTGGAGATTGAGCATAAGGGCCCTTGAGTAAGACTGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555242.1
CDS-3UTR TCA 90 bp GTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGAGTACTTCTTAGGGTaGGACTCAGAGTCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: VFHAQIRSSLGLQEPSREEYFLG*DSESEL
Trigger: CAACTCAGACTCTGAGTCTCACCCTAAGAAGTACTC...TTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555347.1
CDS-3UTR GCA 90 bp AACAAAGAAGAGCCCAGTCTGAAAGCATGCGGTAAGAAACTTAGGGAAGAAACTCTCCTGCCAATGCTCTaGGCTCGGCCTCCTGTCATG +
Preference number: 4 (lower is better)
Translates to: NKEEPSLKACGKKLREETLLPML*ARPPVM
Trigger: CATGACAGGAGGCCGAGCGCAGAGCATTGGCAGGAG...AGTTTCTTCCCTAAGTTTCTTACCGCATGCTTTCAGACTGGGCTCTTCTTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554617.1
CDS-3UTR GCA 90 bp AAAGGAAAGCATAAGACACAGTCTTACTCAAGGGCCCTTATGCTCAATCTCCAACTCCTGCCAATGCTCTaGGCTCGGCCTCCTGTCATG +
Preference number: 4 (lower is better)
Translates to: KGKHKTQSYSRALMLNLQLLPML*ARPPVM
Trigger: CATGACAGGAGGCCGAGCGCAGAGCATTGGCAGGAG...TTGGAGATTGAGCATAAGGGCCCTTGAGTAAGACTGTGTCTTATGCTTTCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555242.1
CDS-3UTR GCA 90 bp GTGTCACTGGGAACAATACACACTCCATGCGTTTTGCTACATCTCCGGAAGAGGATAACTGTTCCACCTTaGCCCTCCTGCCAATGCTCT +
Preference number: 4 (lower is better)
Translates to: VSLGTIHTPCVLLHLRKRITVPP*PSCQCS
Trigger: AGAGCATTGGCAGGAGGGGCAAGGTGGAACAGTTAT...CCTCTTCCGGAGATGTAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR GCA 90 bp ACACATGGATGCTTTCAAGTCCTTGAGGCCCACAGCCTGGTGTGTTTCACGCACTTGGCAATCTCGGTCTaGAAAGCAGACTTCTCATCT +
Preference number: 4 (lower is better)
Translates to: THGCFQVLEAHSLVCFTHLAISV*KADFSS
Trigger: AGATGAGAAGTCTGCTTTGCAGACCGAGATTGCCAA...GTGCGTGAAACACACCAGGCTGTGGGCCTCAAGGACTTGAAAGCATCCATGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR GCA 90 bp CCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAATTGGCAATCTCGGTCTaGAAAGCAGACTTCTCATCT +
Preference number: 4 (lower is better)
Translates to: PQPGVFHAQIRSSLGLQELAISV*KADFSS
Trigger: AGATGAGAAGTCTGCTTTGCAGACCGAGATTGCCAA...TTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR GCA 90 bp TACCAGCTCTCTGAAGTGTCACTGGGAACAATACACACTCCATGCGTTTTGCTACAGAGGCTCCCAGTCTaGTGCATAGAAGGACCCAGA +
Preference number: 4 (lower is better)
Translates to: YQLSEVSLGTIHTPCVLLQRLPV*CIEGPR
Trigger: TCTGGGTCCTTCTATGCAGCAGACTGGGAGCCTCTG...TAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGACACTTCAGAGAGCTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR GCA 90 bp GCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTGAGTCCACACATGGATaGTTTCAAGTCCTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: AQIRSSLGLQEPSREDVFESTHG*FQVLEA
Trigger: GGCCTCAAGGACTTGAAAGCATCCATGTGTGGACTC...AAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR GCA 90 bp GTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAACACTCCATGCGTTTTaGTACATCTCCGGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: VFHAQIRSSLGLQEPSRETLHAF*YISGRG
Trigger: ACCTCTTCCGGAGATGTAGCAAAACGCATGGAGTGT...TTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR GCA 90 bp CCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAAACAATACACACTCCATaGGTTTTGCTACATCTCCGG +
Preference number: 4 (lower is better)
Translates to: PQPGVFHAQIRSSLGLQETIHTP*VLLHLR
Trigger: CCGGAGATGTAGCAAAACGCATGGAGTGTGTATTGT...TTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR GCA 90 bp GCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCGAAGAGAAACGATCCTaGCACGGACATTTCATCTTA +
Preference number: 4 (lower is better)
Translates to: AWCVSRTDKVLPRSTGTLEEKRS*HGHFIL
Trigger: TAAGATGAAATGTCCGTGGCAGGATCGTTTCTCTTC...GAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555686.1
CDS-3UTR CCA 90 bp CCCAGTCTGAAAGCATGCGGTAAGAAACTTAGGGAAGAAACTATGAGAGTACTTGCTGTGGAGCAGAGCTaGGTAGGAGCACGGTCACTG +
Preference number: 4 (lower is better)
Translates to: PSLKACGKKLREETMRVLAVEQS*VGARSL
Trigger: CAGTGACCGTGCTCCTACCCAGCTCTGCTCCACAGC...AAGTACTCTCATAGTTTCTTCCCTAAGTTTCTTACCGCATGCTTTCAGACTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554617.1
CDS-3UTR CCA 90 bp CTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACTGGTCTGTCTCCGCTTaGAGTGTATCAGTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LGLQEPSREDVFLLSVMHWSVSA*SVSVSS
Trigger: GGAGCTGACTGATACACTCCAAGCGGAGACAGACCA...GTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CCA 90 bp GGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCAGTCTCCTTCAGCAGGTTaGCAATCTCGGTCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: GLQEPSREDVFLLSVMHQSPSAG*QSRSAK
Trigger: CTTTGCAGACCGAGATTGCCAACCTGCTGAAGGAGA...CTGGTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CCA 90 bp GCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTTCTCCTTCAGCAGGTTaGCAATCTCGGTCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: AQIRSSLGLQEPSREDVFSPSAG*QSRSAK
Trigger: CTTTGCAGACCGAGATTGCCAACCTGCTGAAGGAGA...AAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CCA 90 bp CTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCACAGACATCTCTTCTaGGAAGCCCAGGTCATCAGG +
Preference number: 4 (lower is better)
Translates to: LGLQEPSREDVFLLSVMHHRHLF*EAQVIR
Trigger: CCTGATGACCTGGGCTTCCCAGAAGAGATGTCTGTG...GTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CCA 90 bp CTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCAGCTCACTCAGAGTCTGAGTTaGGATGGAATGGGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: LQEPSREDVFLLSVMHQLTQSLS*DGMGLE
Trigger: CTCCAAGCCCATTCCATCCCAACTCAGACTCTGAGT...GAGCTGGTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555347.1
CDS-3UTR TCA 90 bp GAGCCCAGTCTGAAAGCATGCGGTAAGAAACTTAGGGAAGAAACTATGAGAGTACCTCGTAGTCTGCGTTaGAGCCCGAGAACATCATCG +
Preference number: 4 (lower is better)
Translates to: EPSLKACGKKLREETMRVPRSLR*SPRTSS
Trigger: CGATGATGTTCTCGGGCTTCAACGCAGACTACGAGG...TACTCTCATAGTTTCTTCCCTAAGTTTCTTACCGCATGCTTTCAGACTGGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554617.1
CDS-3UTR TCA 90 bp CTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCAGCTCGGTGAGCTGCCAGGATaGACTCTAGTTTTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LQEPSREDVFLLSVMHQLGELPG*TLVFPS
Trigger: AGAAGGAAAAACTAGAGTTCATCCTGGCAGCTCACC...GAGCTGGTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR GCA 90 bp GCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTACACTCCATGCGTTTTaGTACATCTCCGGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: AQIRSSLGLQEPSREDVFTLHAF*YISGRG
Trigger: ACCTCTTCCGGAGATGTAGCAAAACGCATGGAGTGT...AAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR GCA 90 bp AACAAAGAAGAGCCCAGTCTGAAAGCATGCGGTAAGAAACTTAGGGAAGAAACTTCCCAGTTACGGATGTaGAGCCAGCCCCATCAGTGG +
Preference number: 4 (lower is better)
Translates to: NKEEPSLKACGKKLREETSQLRM*SQPHQW
Trigger: CCACTGATGGGGCTGGCTGCACATCCGTAACTGGGA...AGTTTCTTCCCTAAGTTTCTTACCGCATGCTTTCAGACTGGGCTCTTCTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554617.1
CDS-3UTR GCA 90 bp AGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTAAACCATTTCTGACCTaGAGTTGCAGACTAGGTGTG +
Preference number: 4 (lower is better)
Translates to: RSSLGLQEPSREDVFLLSKPFLT*SCRLGV
Trigger: CACACCTAGTCTGCAACTGCAGGTCAGAAATGGTTT...AGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555347.1
CDS-3UTR CCA 90 bp CATAAGACACAGTCTTACTCAAGGGCCCTTATGCTCAATCTCCAACTTTCCCCTTCCGGTTGCGGCATTTaGCTGCAGCCATCTTATTCC +
Preference number: 4 (lower is better)
Translates to: HKTQSYSRALMLNLQLSPSGCGI*LQPSYS
Trigger: GGAATAAGATGGCTGCAGCCAAATGCCGCAACCGGA...AGGGGAAAGTTGGAGATTGAGCATAAGGGCCCTTGAGTAAGACTGTGTCTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555242.1
CDS-3UTR CCA 90 bp TACCAGCTCTCTGAAGTGTCACTGGGAACAATACACACTCCATGCGTTTTGCTATTGAGGCCCACAGCCTaGTGTGTTTCACGCACAGAT +
Preference number: 4 (lower is better)
Translates to: YQLSEVSLGTIHTPCVLLLRPTA*CVSRTD
Trigger: ATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAA...TAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGACACTTCAGAGAGCTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR CCA 90 bp AACAAAGAAGAGCCCAGTCTGAAAGCATGCGGTAAGAAACTTAGGGAAGAAACTCTTCATCCTCTGTACTaGGCTCCTGCATCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: NKEEPSLKACGKKLREETLHPLY*APASPG
Trigger: CCCCGGAGATGCAGGAGCCCAGTACAGAGGATGAAG...AGTTTCTTCCCTAAGTTTCTTACCGCATGCTTTCAGACTGGGCTCTTCTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554617.1
CDS-3UTR CCA 90 bp CCCAGTCTGAAAGCATGCGGTAAGAAACTTAGGGAAGAAACTATGAGAGTACTTGGGATGGAATGGGCTTaGAGCCAGGGCTCCCAGTTA +
Preference number: 4 (lower is better)
Translates to: PSLKACGKKLREETMRVLGMEWA*SQGSQL
Trigger: TAACTGGGAGCCCTGGCTCCAAGCCCATTCCATCCC...AAGTACTCTCATAGTTTCTTCCCTAAGTTTCTTACCGCATGCTTTCAGACTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554617.1
CDS-3UTR CCA 90 bp GAGCCCAGTCTGAAAGCATGCGGTAAGAAACTTAGGGAAGAAACTATGAGAGTAGAGTCTGAGTTGGGATaGAATGGGCTTGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: EPSLKACGKKLREETMRVESELG*NGLGAR
Trigger: CCTGGCTCCAAGCCCATTCCATCCCAACTCAGACTC...TACTCTCATAGTTTCTTCCCTAAGTTTCTTACCGCATGCTTTCAGACTGGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554617.1
CDS-3UTR TCA 90 bp CCCAGTCTGAAAGCATGCGGTAAGAAACTTAGGGAAGAAACTATGAGAGTACTTGAAGGAGTCTGCGGGTaGGTGGTAGTAAGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: PSLKACGKKLREETMRVLEGVCG*VVVREA
Trigger: AGCCTCTCTTACTACCACTCACCCGCAGACTCCTTC...AAGTACTCTCATAGTTTCTTCCCTAAGTTTCTTACCGCATGCTTTCAGACTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554617.1
CDS-3UTR TCA 90 bp AAAGGAAAGCATAAGACACAGTCTTACTCAAGGGCCCTTATGCTCAATCTCCAAGAAGGAGTCTGCGGGTaGGTGGTAGTAAGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: KGKHKTQSYSRALMLNLQEGVCG*VVVREA
Trigger: AGCCTCTCTTACTACCACTCACCCGCAGACTCCTTC...TTGGAGATTGAGCATAAGGGCCCTTGAGTAAGACTGTGTCTTATGCTTTCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555242.1
CDS-3UTR TCA 90 bp CTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACGGTGAGCTGCCAGGATaGACTCTAGTTTTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LGLQEPSREDVFLLSVMHGELPG*TLVFPS
Trigger: AGAAGGAAAAACTAGAGTTCATCCTGGCAGCTCACC...GTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR TCA 90 bp TACACACTCCATGCGTTTTGCTACATCTCCGGAAGAGGTAAGGACTTGAGTCCAGAAGAGGTAAGGACTTaGGTCCACACATGGATGCTT +
Preference number: 4 (lower is better)
Translates to: YTLHAFCYISGRGKDLSPEEVRT*VHTWML
Trigger: AAGCATCCATGTGTGGACTCAAGTCCTTACCTCTTC...TGGACTCAAGTCCTTACCTCTTCCGGAGATGTAGCAAAACGCATGGAGTGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR TCA 90 bp GAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCAGCTCGGGCAGGCACTAGATACAATTTaGAAATATCCAGCACCAGGT +
Preference number: 4 (lower is better)
Translates to: EPSREDVFLLSVMHQLGQALDTI*KYPAPG
Trigger: ACCTGGTGCTGGATATTTTCAAATTGTATCTAGTGC...CTGCCCGAGCTGGTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303562.9
CDS-3UTR GCA 90 bp TCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTATTGGCAATCTCGGTCTaGAAAGCAGACTTCTCATCT +
Preference number: 4 (lower is better)
Translates to: SSLGLQEPSREDVFLLSVLAISV*KADFSS
Trigger: AGATGAGAAGTCTGCTTTGCAGACCGAGATTGCCAA...TACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR GCA 90 bp GCGTTTTGCTACATCTCCGGAAGAGGTAAGGACTTGAGTCCACACATGGATGCTTTGGCAATCTCGGTCTaGAAAGCAGACTTCTCATCT +
Preference number: 4 (lower is better)
Translates to: AFCYISGRGKDLSPHMDALAISV*KADFSS
Trigger: AGATGAGAAGTCTGCTTTGCAGACCGAGATTGCCAA...AGCATCCATGTGTGGACTCAAGTCCTTACCTCTTCCGGAGATGTAGCAAAACGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR GCA 90 bp CTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCAGCTCACAATACACACTCCATaGGTTTTGCTACATCTCCGG +
Preference number: 4 (lower is better)
Translates to: LQEPSREDVFLLSVMHQLTIHTP*VLLHLR
Trigger: CCGGAGATGTAGCAAAACGCATGGAGTGTGTATTGT...GAGCTGGTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR GCA 90 bp TCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTATTCAGTAAAAGTGTCTaGCATCACCTCCATTCACCC +
Preference number: 4 (lower is better)
Translates to: SSLGLQEPSREDVFLLSVFSKSV*HHLHSP
Trigger: GGGTGAATGGAGGTGATGGCAGACACTTTTACTGAA...TACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555347.1
CDS-3UTR CCA 90 bp AGCTCTCTGAAGTGTCACTGGGAACAATACACACTCCATGCGTTTTGCTACATCTCTCCTTCAGCAGGTTaGCAATCTCGGTCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: SSLKCHWEQYTLHAFCYISPSAG*QSRSAK
Trigger: CTTTGCAGACCGAGATTGCCAACCTGCTGAAGGAGA...GATGTAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGACACTTCAGAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR CCA 90 bp AACAAAGAAGAGCCCAGTCTGAAAGCATGCGGTAAGAAACTTAGGGAAGAAACTAGCCAGCCCCATCAGTaGCTTCATCCTCTGTACTGG +
Preference number: 4 (lower is better)
Translates to: NKEEPSLKACGKKLREETSQPHQ*LHPLYW
Trigger: CCAGTACAGAGGATGAAGCCACTGATGGGGCTGGCT...AGTTTCTTCCCTAAGTTTCTTACCGCATGCTTTCAGACTGGGCTCTTCTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554617.1
CDS-3UTR GCA 90 bp CACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGATCAGAACACACTATTaGCAGGAACACAGTAGTTAT +
Preference number: 4 (lower is better)
Translates to: HAQIRSSLGLQEPSREDVIRTHY*QEHSSY
Trigger: ATAACTACTGTGTTCCTGGCAATAGTGTGTTCTGAT...CACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303562.9
CDS-3UTR GCA 90 bp GACACAGACCCAGGCCTGGCTCAACATGCTACTAACTACCAGCTCTCTGAAGTGAGACCACCTCAACAATaGATGATCAGTAACATTACA +
Preference number: 4 (lower is better)
Translates to: DTDPGLAQHATNYQLSEVRPPQQ*MISNIT
Trigger: TGTAATGTTACTGATCATGCATTGTTGAGGTGGTCT...CACTTCAGAGAGCTGGTAGTTAGTAGCATGTTGAGCCAGGCCTGGGTCTGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303562.9
CDS-3UTR GCA 90 bp CCCAGTCTGAAAGCATGCGGTAAGAAACTTAGGGAAGAAACTATGAGAGTACTTTCTTGGCTTCTCAGATaGTCGCTGCAGATGCGGTTG +
Preference number: 4 (lower is better)
Translates to: PSLKACGKKLREETMRVLSWLLR*SLQMRL
Trigger: CAACCGCATCTGCAGCGAGCATCTGAGAAGCCAAGA...AAGTACTCTCATAGTTTCTTCCCTAAGTTTCTTACCGCATGCTTTCAGACTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554617.1
CDS-3UTR CCA 90 bp GGAAAGCATAAGACACAGTCTTACTCAAGGGCCCTTATGCTCAATCTCCAACTTAGAGTACCTACCGCTTaGAGTGTATCAGTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GKHKTQSYSRALMLNLQLRVPTA*SVSVSS
Trigger: GGAGCTGACTGATACACTCCAAGCGGTAGGTACTCT...AAGTTGGAGATTGAGCATAAGGGCCCTTGAGTAAGACTGTGTCTTATGCTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555242.1
CDS-3UTR GCA 90 bp GAAAGCATAAGACACAGTCTTACTCAAGGGCCCTTATGCTCAATCTCCAACTTTATAACTGTTCCACCTTaGCCCTCCTGCCAATGCTCT +
Preference number: 4 (lower is better)
Translates to: ESIRHSLTQGPLCSISNFITVPP*PSCQCS
Trigger: AGAGCATTGGCAGGAGGGGCAAGGTGGAACAGTTAT...AAAGTTGGAGATTGAGCATAAGGGCCCTTGAGTAAGACTGTGTCTTATGCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555242.1
CDS-3UTR GCA 90 bp GGAAAGCATAAGACACAGTCTTACTCAAGGGCCCTTATGCTCAATCTCCAACTTACTCAAGGGCCCTTATaGTCAATCTCCAACTTTCCC +
Preference number: 4 (lower is better)
Translates to: GKHKTQSYSRALMLNLQLTQGPL*SISNFP
Trigger: GGGAAAGTTGGAGATTGAGCATAAGGGCCCTTGAGT...AAGTTGGAGATTGAGCATAAGGGCCCTTGAGTAAGACTGTGTCTTATGCTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555242.1
CDS-3UTR CCA 90 bp GTCACTGGGAACAATACACACTCCATGCGTTTTGCTACATCTCCGGAAGAGGTATCTCTGAAGTGTCACTaGGAACAATACACACTCCAT +
Preference number: 4 (lower is better)
Translates to: VTGNNTHSMRFATSPEEVSLKCH*EQYTLH
Trigger: ATGGAGTGTGTATTGTTCCCAGTGACACTTCAGAGA...TACCTCTTCCGGAGATGTAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR CCA 90 bp AACAAAGAAGAGCCCAGTCTGAAAGCATGCGGTAAGAAACTTAGGGAAGAAACTACTCAGAGTCTGAGTTaGGATGGAATGGGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: NKEEPSLKACGKKLREETTQSLS*DGMGLE
Trigger: CTCCAAGCCCATTCCATCCCAACTCAGACTCTGAGT...AGTTTCTTCCCTAAGTTTCTTACCGCATGCTTTCAGACTGGGCTCTTCTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554617.1
CDS-3UTR TCA 90 bp AACAAAGAAGAGCCCAGTCTGAAAGCATGCGGTAAGAAACTTAGGGAAGAAACTGAGTACTTCTTAGGGTaGGACTCAGAGTCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: NKEEPSLKACGKKLREETEYFLG*DSESEL
Trigger: CAACTCAGACTCTGAGTCTCACCCTAAGAAGTACTC...AGTTTCTTCCCTAAGTTTCTTACCGCATGCTTTCAGACTGGGCTCTTCTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554617.1
CDS-3UTR TCA 90 bp AACAAAGAAGAGCCCAGTCTGAAAGCATGCGGTAAGAAACTTAGGGAAGAAACTAAGAAGAGCCCAGTCTaGAAGCATGCGGTAAGAAAC +
Preference number: 4 (lower is better)
Translates to: NKEEPSLKACGKKLREETKKSPV*KHAVRN
Trigger: GTTTCTTACCGCATGCTTTCAGACTGGGCTCTTCTT...AGTTTCTTCCCTAAGTTTCTTACCGCATGCTTTCAGACTGGGCTCTTCTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554617.1
CDS-3UTR CCA 90 bp AGCTCTCTGAAGTGTCACTGGGAACAATACACACTCCATGCGTTTTGCTACATCTCTCTGAAGTGTCACTaGGAACAATACACACTCCAT +
Preference number: 4 (lower is better)
Translates to: SSLKCHWEQYTLHAFCYISLKCH*EQYTLH
Trigger: ATGGAGTGTGTATTGTTCCCAGTGACACTTCAGAGA...GATGTAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGACACTTCAGAGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS GCA 90 bp GCTGTGGAGCAGAGCTGGGTAGGAGCACGGTCACTGCTCGTTCGCTaGGCCGCGGCCGCCGGCTCAGTCTTGGCTTCTCAGATGCTCGCT +
Preference number: 5 (lower is better)
Translates to: AVEQSWVGARSLLVR*AAAAGSVLASQMLA
Trigger: AGCGAGCATCTGAGAAGCCAAGACTGAGCCGGCGGCCGCGGCGCAGCGAACGAGCAGTGACCGTGCTCCTACCCAGCTCTGCTCCACAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000554212.5
ENST00000554617.1
ENST00000556324.2
CDS GCA 90 bp CTGCCTCCCGAAGGGGGAACCAATTCTTACTATGGCAAGCGTGCGTaGGCTCAGAGCAAGTCCCGAGCCCCCGAGCCGGCACCGCTCCGG +
Preference number: 5 (lower is better)
Translates to: LPPEGGTNSYYGKRA*AQSKSRAPEPAPLR
Trigger: CCGGAGCGGTGCCGGCTCGGGGGCTCGGGACTTGCTCTGAGCGCACGCACGCTTGCCATAGTAAGAATTGGTTCCCCCTTCGGGAGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000556324.2
CDS CCA 90 bp CCACCTTGCCCCTCCTGCCAATGCTCTGCGCTCGGCCTCCTGTCATaGTCTTCACAACGCCAGCCCTGGAGTAAGCCCCAGCGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: PPCPSCQCSALGLLS*SSQRQPWSKPQRRG
Trigger: CCCCCTCCGCTGGGGCTTACTCCAGGGCTGGCGTTGTGAAGACCATGACAGGAGGCCGAGCGCAGAGCATTGGCAGGAGGGGCAAGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000554212.5
ENST00000554617.1
ENST00000555242.1
ENST00000555672.1
ENST00000555686.1
ENST00000557139.1
CDS TCA 90 bp AGAGAGGCTATCCCCGGCCGGGGACGCGCTGCTGCAGCGGGAGGATaGCGCCTCGTAGTCTGCGTTGAAGCCCGAGAACATCATCGTGGC +
Preference number: 5 (lower is better)
Translates to: REAIPGRGRAAAAGG*RLVVCVEAREHHRG
Trigger: GCCACGATGATGTTCTCGGGCTTCAACGCAGACTACGAGGCGTCATCCTCCCGCTGCAGCAGCGCGTCCCCGGCCGGGGATAGCCTCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000554212.5
ENST00000554617.1
ENST00000555242.1
ENST00000556324.2
CDS TCA 90 bp GGGACGCGCTGCTGCAGCGGGAGGATGACGCCTCGTAGTCTGCGTTaGAGCCCGAGAACATCATCGTGGCGGTTAGGCAAAGCCGGGCGA +
Preference number: 5 (lower is better)
Translates to: GTRCCSGRMTPRSLR*SPRTSSWRLGKAGR
Trigger: TCGCCCGGCTTTGCCTAACCGCCACGATGATGTTCTCGGGCTTCAACGCAGACTACGAGGCGTCATCCTCCCGCTGCAGCAGCGCGTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000554212.5
ENST00000554617.1
ENST00000556324.2
CDS GCA 90 bp GAACCTGCCTCCCGAAGGGGGAACCAATTCTTACTATGGCAAGCGTaGGTGCGCTCAGAGCAAGTCCCGAGCCCCCGAGCCGGCACCGCT +
Preference number: 5 (lower is better)
Translates to: EPASRRGNQFLLWQA*VRSEQVPSPRAGTA
Trigger: AGCGGTGCCGGCTCGGGGGCTCGGGACTTGCTCTGAGCGCACGCACGCTTGCCATAGTAAGAATTGGTTCCCCCTTCGGGAGGCAGGTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000556324.2
CDS-3UTR CAA 90 bp GGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGCTCGGGCAGTGGCACTaGTGGGTGCCGGCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: GPQPGVFHAQIRSSLGLQLGQWH*WVPAAS
Trigger: GGAGGCAGCCGGCACCCACAAGTGCCACTGCCCGAG...CTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS CCA 90 bp GCTCAGAACGAACCTGCCTCCCGAAGGGGGAACCAATTCTTACTATaGCAAGCGTGCGTGCGCTCAGAGCAAGTCCCGAGCCCCCGAGCC +
Preference number: 5 (lower is better)
Translates to: AQNEPASRRGNQFLL*QACVRSEQVPSPRA
Trigger: GGCTCGGGGGCTCGGGACTTGCTCTGAGCGCACGCACGCTTGCCATAGTAAGAATTGGTTCCCCCTTCGGGAGGCAGGTTCGTTCTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000556324.2
CDS-3UTR CAA 90 bp AAGTCCTTGAGGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTCTCGGGCAGTGGCACTaGTGGGTGCCGGCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: KSLRPTAWCVSRTDKVLPLGQWH*WVPAAS
Trigger: GGAGGCAGCCGGCACCCACAAGTGCCACTGCCCGAG...AGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAAGGACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CAA 90 bp GCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCCTCGGGCAGTGGCACTaGTGGGTGCCGGCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: AWCVSRTDKVLPRSTGTLLGQWH*WVPAAS
Trigger: GGAGGCAGCCGGCACCCACAAGTGCCACTGCCCGAG...GAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS TCA 90 bp GGTGGGCAGCTGCACAGCTGGGGAAGGAGTCAGCCTCGGGGTAGGTaGAGACGAAGGAAGACGTGTAAGCAGTGCAGCTGGGAGTACAGG +
Preference number: 5 (lower is better)
Translates to: GGQLHSWGRSQPRGR*RRRKTCKQCSWEYR
Trigger: CCTGTACTCCCAGCTGCACTGCTTACACGTCTTCCTTCGTCTTCACCTACCCCGAGGCTGACTCCTTCCCCAGCTGTGCAGCTGCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS GCA 90 bp AGTTGGTCTGTCTCCTGTTCCACCTTGCCCCTCCTGCCAATGCTCTaGGCTCGGCCTCCTGTCATGGTCTTCACAACGCCAGCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: SWSVSCSTLPLLPML*ARPPVMVFTTPALE
Trigger: CTCCAGGGCTGGCGTTGTGAAGACCATGACAGGAGGCCGAGCGCAGAGCATTGGCAGGAGGGGCAAGGTGGAACAGGAGACAGACCAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535987.5
ENST00000555672.1
CDS GCA 90 bp CTAGAGTTCCTCACCTGTTCCACCTTGCCCCTCCTGCCAATGCTCTaGGCTCGGCCTCCTGTCATGGTCTTCACAACGCCAGCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: LEFLTCSTLPLLPML*ARPPVMVFTTPALE
Trigger: CTCCAGGGCTGGCGTTGTGAAGACCATGACAGGAGGCCGAGCGCAGAGCATTGGCAGGAGGGGCAAGGTGGAACAGGTGAGGAACTCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554617.1
CDS-3UTR CAA 90 bp TCCTTGAGGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGAGCTCCCTCCTCCGGTaGCGGCATTTGGCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: SLRPTAWCVSRTDKVLPRSSLLR*RHLAAA
Trigger: GGCTGCAGCCAAATGCCGCAACCGGAGGAGGGAGCT...CCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000555347.1
ENST00000555686.1
CDS GCA 90 bp ATCAGTGGCTTCATCCTCTGTACTGGGCTCCTGCATCTCCGGGGCTaGTTCCCACCCAGCCCCCACATTCCCAGGAAGAGTACGCTAGAG +
Preference number: 5 (lower is better)
Translates to: ISGFILCTGLLHLRG*FPPSPHIPRKSTLE
Trigger: CTCTAGCGTACTCTTCCTGGGAATGTGGGGGCTGGGTGGGAAGCAGCCCCGGAGATGCAGGAGCCCAGTACAGAGGATGAAGCCACTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554617.1
CDS GCA 90 bp GTTGGGATGGAATGGGCTTGGAGCCAGGGCTCCCAGTTACGGATGTaGAGCCAGCCCCATCAGTGGCTTCATCCTCTGTACTGGGCTCCT +
Preference number: 5 (lower is better)
Translates to: VGMEWAWSQGSQLRM*SQPHQWLHPLYWAP
Trigger: AGGAGCCCAGTACAGAGGATGAAGCCACTGATGGGGCTGGCTGCACATCCGTAACTGGGAGCCCTGGCTCCAAGCCCATTCCATCCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554617.1
ENST00000555347.1
CDS CCA 90 bp CAGATAGGTCCATGTCTGGCACGGAGCGGGCTGTCTCAGAGCCACTaGGCCTGGATGATGCTGGGAACAGGAAGTCATCAAAGGGCTCGG +
Preference number: 5 (lower is better)
Translates to: QIGPCLARSGLSQSH*AWMMLGTGSHQRAR
Trigger: CCGAGCCCTTTGATGACTTCCTGTTCCCAGCATCATCCAGGCCCAGTGGCTCTGAGACAGCCCGCTCCGTGCCAGACATGGACCTATCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS CCA 90 bp ACAGAAGGGGAAAGCCGACGTGAGCGAGCAGGTTCCGGACACAGGTaGGGCGAGTTCCCAGTGCCGCATGCAGCAGTGAAGAGAAACGAT +
Preference number: 5 (lower is better)
Translates to: TEGESRRERAGSGHR*GEFPVPHAAVKRND
Trigger: ATCGTTTCTCTTCACTGCTGCATGCGGCACTGGGAACTCGCCCCACCTGTGTCCGGAACCTGCTCGCTCACGTCGGCTTTCCCCTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555672.1
ENST00000555686.1
CDS-3UTR CAA 90 bp AAGTCCTTGAGGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGCTCCCTCCTCCGGTaGCGGCATTTGGCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: KSLRPTAWCVSRTDKVLPSSLLR*RHLAAA
Trigger: GGCTGCAGCCAAATGCCGCAACCGGAGGAGGGAGCT...AGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAAGGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000555347.1
ENST00000555686.1
CDS GCA 90 bp TCTTCTGGAGATAACTGTTCCACCTTGCCCCTCCTGCCAATGCTCTaGGCTCGGCCTCCTGTCATGGTCTTCACAACGCCAGCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: SSGDNCSTLPLLPML*ARPPVMVFTTPALE
Trigger: CTCCAGGGCTGGCGTTGTGAAGACCATGACAGGAGGCCGAGCGCAGAGCATTGGCAGGAGGGGCAAGGTGGAACAGTTATCTCCAGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000554212.5
ENST00000555242.1
ENST00000555686.1
CDS-3UTR CAA 90 bp CTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCAGCTCCTCGGGCAGTGGCACTaGTGGGTGCCGGCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: LQEPSREDVFLLSVMHQLLGQWH*WVPAAS
Trigger: GGAGGCAGCCGGCACCCACAAGTGCCACTGCCCGAG...GAGCTGGTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS GCA 90 bp CTTCTTCTTCTGGAGATAACTGTTCCACCTTGCCCCTCCTGCCAATaGTCTGCGCTCGGCCTCCTGTCATGGTCTTCACAACGCCAGCCC +
Preference number: 5 (lower is better)
Translates to: LLLLEITVPPCPSCQ*SALGLLSWSSQRQP
Trigger: GGGCTGGCGTTGTGAAGACCATGACAGGAGGCCGAGCGCAGAGCATTGGCAGGAGGGGCAAGGTGGAACAGTTATCTCCAGAAGAAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000554212.5
ENST00000555242.1
ENST00000555686.1
CDS GCA 90 bp GCGAGCAGGTTCCGGACACAGGTGGGGCGAGTTCCCAGTGCCGCATaGAGCAGTGAAGAGAAACGATCCTGCCACGGACATTTCATCTTA +
Preference number: 5 (lower is better)
Translates to: ASRFRTQVGRVPSAA*SSEEKRSCHGHFIL
Trigger: TAAGATGAAATGTCCGTGGCAGGATCGTTTCTCTTCACTGCTGCATGCGGCACTGGGAACTCGCCCCACCTGTGTCCGGAACCTGCTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555672.1
ENST00000555686.1
CDS-3UTR CAA 90 bp GAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCAGCTCGGGCAGGCCGCCGGCTCAGTCTaGGCTTCTCAGATGCTCGCT +
Preference number: 5 (lower is better)
Translates to: EPSREDVFLLSVMHQLGQAAGSV*ASQMLA
Trigger: AGCGAGCATCTGAGAAGCCAAGACTGAGCCGGCGGC...CTGCCCGAGCTGGTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000535987.5
CDS-3UTR CAA 90 bp CACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGCAGAAGTCCTGCGCGTaGACAGGCGAGCCCATGCTG +
Preference number: 5 (lower is better)
Translates to: HAQIRSSLGLQEPSREDVQKSCA*TGEPML
Trigger: CAGCATGGGCTCGCCTGTCAACGCGCAGGACTTCTG...CACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000535987.5
CDS GCA 90 bp TGTCTGCCATCACCTCCATTCACCCACCCCAGTAGAACTGGCTCCTaGAGCTTCCCTGCTTCCTGGCACCCCACTGTGAAACCATTTCTG +
Preference number: 5 (lower is better)
Translates to: CLPSPPFTHPSRTGS*SFPASWHPTVKPFL
Trigger: CAGAAATGGTTTCACAGTGGGGTGCCAGGAAGCAGGGAAGCTGCAGGAGCCAGTTCTACTGGGGTGGGTGAATGGAGGTGATGGCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555347.1
CDS GCA 90 bp GAGATCCGTCCTGGAGTGCAGACCAGAGGTTGCTCAGAACGAACCTaGCTCCCGAAGGGGGAACCAATTCTTACTATGGCAAGCGTGCGT +
Preference number: 5 (lower is better)
Translates to: EIRPGVQTRGCSERT*LPKGEPILTMASVR
Trigger: ACGCACGCTTGCCATAGTAAGAATTGGTTCCCCCTTCGGGAGGCAGGTTCGTTCTGAGCAACCTCTGGTCTGCACTCCAGGACGGATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556324.2
CDS CCA 90 bp TGTGCTTGGGACACGTCTGCTCCAGCTAATGTCAGAGATCCGTCCTaGAGTGCAGACCAGAGGTTGCTCAGAACGAACCTGCCTCCCGAA +
Preference number: 5 (lower is better)
Translates to: CAWDTSAPANVRDPS*SADQRLLRTNLPPE
Trigger: TTCGGGAGGCAGGTTCGTTCTGAGCAACCTCTGGTCTGCACTCCAGGACGGATCTCTGACATTAGCTGGAGCAGACGTGTCCCAAGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556324.2
CDS-3UTR CAA 90 bp GGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGACCGTGGGAATGAAGTaGGCACTGGAGACGGCCAGG +
Preference number: 5 (lower is better)
Translates to: GVFHAQIRSSLGLQEPSRTVGMK*ALETAR
Trigger: CCTGGCCGTCTCCAGTGCCAACTTCATTCCCACGGT...CCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR CAA 90 bp GTGTCACTGGGAACAATACACACTCCATGCGTTTTGCTACATCTCCGGAAGAGGAGCTCCCTCCTCCGGTaGCGGCATTTGGCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: VSLGTIHTPCVLLHLRKRSSLLR*RHLAAA
Trigger: GGCTGCAGCCAAATGCCGCAACCGGAGGAGGGAGCT...CCTCTTCCGGAGATGTAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR CAA 90 bp CAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCAGCTCGGGGGTTCCACTGAGGGCTaGGGCTCAGGGTCATTGAGG +
Preference number: 5 (lower is better)
Translates to: QEPSREDVFLLSVMHQLGGSTEG*GSGSLR
Trigger: CCTCAATGACCCTGAGCCCAAGCCCTCAGTGGAACC...CCCGAGCTGGTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CAA 90 bp CACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGGTCTCCTGTTCCACCTaGCCCCTCCTGCCAATGCTC +
Preference number: 5 (lower is better)
Translates to: HAQIRSSLGLQEPSREDVVSCST*PLLPML
Trigger: GAGCATTGGCAGGAGGGGCAAGGTGGAACAGGAGAC...CACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535987.5
CDS-3UTR CAA 90 bp CACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTGGGATGGAATGGGCTaGGAGCCAGGGCTCCCAGTT +
Preference number: 5 (lower is better)
Translates to: HAQIRSSLGLQEPSREDVWDGMG*EPGLPV
Trigger: AACTGGGAGCCCTGGCTCCAAGCCCATTCCATCCCA...CACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555347.1
CDS TCA 90 bp GTTCCGGACACAGGTGGGGCGAGTTCCCAGTGCCGCATGCAGCAGTaGAGAGAAACGATCCTGCCACGGACATTTCATCTTAAATGTCCC +
Preference number: 5 (lower is better)
Translates to: VPDTGGASSQCRMQQ*RETILPRTFHLKCP
Trigger: GGGACATTTAAGATGAAATGTCCGTGGCAGGATCGTTTCTCTTCACTGCTGCATGCGGCACTGGGAACTCGCCCCACCTGTGTCCGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555672.1
ENST00000555686.1
CDS-3UTR CAA 90 bp TCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAGCCGCCGGCTCAGTCTaGGCTTCTCAGATGCTCGCT +
Preference number: 5 (lower is better)
Translates to: SSLGLQEPSREDVFLLSVAAGSV*ASQMLA
Trigger: AGCGAGCATCTGAGAAGCCAAGACTGAGCCGGCGGC...TACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000535987.5
CDS-3UTR CAA 90 bp AAGTCCTTGAGGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTGATAACTGTTCCACCTaGCCCCTCCTGCCAATGCTC +
Preference number: 5 (lower is better)
Translates to: KSLRPTAWCVSRTDKVLPDNCST*PLLPML
Trigger: GAGCATTGGCAGGAGGGGCAAGGTGGAACAGTTATC...AGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAAGGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR CAA 90 bp GGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGTTGGTCTGTCTCCGCTaGGAGTGTATCAGTCAGCTC +
Preference number: 5 (lower is better)
Translates to: GPQPGVFHAQIRSSLGLQLVCLR*ECISQL
Trigger: GAGCTGACTGATACACTCCAAGCGGAGACAGACCAA...CTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CAA 90 bp GTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGGTTCCACTGAGGGCTaGGGCTCAGGGTCATTGAGG +
Preference number: 5 (lower is better)
Translates to: VFHAQIRSSLGLQEPSREGSTEG*GSGSLR
Trigger: CCTCAATGACCCTGAGCCCAAGCCCTCAGTGGAACC...TTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CAA 90 bp GTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAATCAGAGGAAGGCTCATaGCTGCTGCTGCCCTTGCGG +
Preference number: 5 (lower is better)
Translates to: VFHAQIRSSLGLQEPSRESEEGS*LLLPLR
Trigger: CCGCAAGGGCAGCAGCAGCAATGAGCCTTCCTCTGA...TTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS TCA 90 bp CGATCCTGCCACGGACATTTCATCTTAAATGTCCCTCATCCTGGATaGAAGGTCTCCCCCTTTTCCTCCCAGGCATTCCGCAGCGCAGTG +
Preference number: 5 (lower is better)
Translates to: RSCHGHFILNVPHPG*KVSPFSSQAFRSAV
Trigger: CACTGCGCTGCGGAATGCCTGGGAGGAAAAGGGGGAGACCTTTCATCCAGGATGAGGGACATTTAAGATGAAATGTCCGTGGCAGGATCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555672.1
ENST00000555686.1
CDS-3UTR CAA 90 bp CTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCAGAAGTCCTGCGCGTaGACAGGCGAGCCCATGCTG +
Preference number: 5 (lower is better)
Translates to: LGLQEPSREDVFLLSVMHQKSCA*TGEPML
Trigger: CAGCATGGGCTCGCCTGTCAACGCGCAGGACTTCTG...GTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000535987.5
CDS-3UTR CAA 90 bp GGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCAGACCGTGGGAATGAAGTaGGCACTGGAGACGGCCAGG +
Preference number: 5 (lower is better)
Translates to: GLQEPSREDVFLLSVMHQTVGMK*ALETAR
Trigger: CCTGGCCGTCTCCAGTGCCAACTTCATTCCCACGGT...CTGGTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR CAA 90 bp CTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCAGCTCACCGTGGGAATGAAGTaGGCACTGGAGACGGCCAGG +
Preference number: 5 (lower is better)
Translates to: LQEPSREDVFLLSVMHQLTVGMK*ALETAR
Trigger: CCTGGCCGTCTCCAGTGCCAACTTCATTCCCACGGT...GAGCTGGTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR CAA 90 bp AGACACAGTCTTACTCAAGGGCCCTTATGCTCAATCTCCAACTTTCCCCTTAAGAGCTCCCTCCTCCGGTaGCGGCATTTGGCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: RHSLTQGPLCSISNFPLKSSLLR*RHLAAA
Trigger: GGCTGCAGCCAAATGCCGCAACCGGAGGAGGGAGCT...CTTAAGGGGAAAGTTGGAGATTGAGCATAAGGGCCCTTGAGTAAGACTGTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555242.1
CDS-3UTR CAA 90 bp AAGTCCTTGAGGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTTTGGTCTGTCTCCGCTaGGAGTGTATCAGTCAGCTC +
Preference number: 5 (lower is better)
Translates to: KSLRPTAWCVSRTDKVLPLVCLR*ECISQL
Trigger: GAGCTGACTGATACACTCCAAGCGGAGACAGACCAA...AGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAAGGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CAA 90 bp TCCTTGAGGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTTCTCCTTCAGCAGGTaGGCAATCTCGGTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: SLRPTAWCVSRTDKVLPRFSFSR*AISVCK
Trigger: TTTGCAGACCGAGATTGCCAACCTGCTGAAGGAGAA...CCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CAA 90 bp CTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCAGCTCGGTTCCACTGAGGGCTaGGGCTCAGGGTCATTGAGG +
Preference number: 5 (lower is better)
Translates to: LQEPSREDVFLLSVMHQLGSTEG*GSGSLR
Trigger: CCTCAATGACCCTGAGCCCAAGCCCTCAGTGGAACC...GAGCTGGTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CAA 90 bp TCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAGGTTCCACTGAGGGCTaGGGCTCAGGGTCATTGAGG +
Preference number: 5 (lower is better)
Translates to: SSLGLQEPSREDVFLLSVGSTEG*GSGSLR
Trigger: CCTCAATGACCCTGAGCCCAAGCCCTCAGTGGAACC...TACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CAA 90 bp GGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCAGTCAGAGGAAGGCTCATaGCTGCTGCTGCCCTTGCGG +
Preference number: 5 (lower is better)
Translates to: GLQEPSREDVFLLSVMHQSEEGS*LLLPLR
Trigger: CCGCAAGGGCAGCAGCAGCAATGAGCCTTCCTCTGA...CTGGTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CAA 90 bp GCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTTCAGAGGAAGGCTCATaGCTGCTGCTGCCCTTGCGG +
Preference number: 5 (lower is better)
Translates to: AQIRSSLGLQEPSREDVFSEEGS*LLLPLR
Trigger: CCGCAAGGGCAGCAGCAGCAATGAGCCTTCCTCTGA...AAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CAA 90 bp GGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGACTCAGAGTCTGAGTaGGGATGGAATGGGCTTGGA +
Preference number: 5 (lower is better)
Translates to: GVFHAQIRSSLGLQEPSRDSESE*GWNGLG
Trigger: TCCAAGCCCATTCCATCCCAACTCAGACTCTGAGTC...CCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555347.1
CDS-3UTR CAA 90 bp GAGCCCAGTCTGAAAGCATGCGGTAAGAAACTTAGGGAAGAAACTATGAGAGTAGCCGCCGGCTCAGTCTaGGCTTCTCAGATGCTCGCT +
Preference number: 5 (lower is better)
Translates to: EPSLKACGKKLREETMRVAAGSV*ASQMLA
Trigger: AGCGAGCATCTGAGAAGCCAAGACTGAGCCGGCGGC...TACTCTCATAGTTTCTTCCCTAAGTTTCTTACCGCATGCTTTCAGACTGGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554617.1
CDS-3UTR CAA 90 bp GAGCCCAGTCTGAAAGCATGCGGTAAGAAACTTAGGGAAGAAACTATGAGAGTAACCGTGGGAATGAAGTaGGCACTGGAGACGGCCAGG +
Preference number: 5 (lower is better)
Translates to: EPSLKACGKKLREETMRVTVGMK*ALETAR
Trigger: CCTGGCCGTCTCCAGTGCCAACTTCATTCCCACGGT...TACTCTCATAGTTTCTTCCCTAAGTTTCTTACCGCATGCTTTCAGACTGGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554617.1
CDS-3UTR CAA 90 bp GGAAAGCATAAGACACAGTCTTACTCAAGGGCCCTTATGCTCAATCTCCAACTTACCGTGGGAATGAAGTaGGCACTGGAGACGGCCAGG +
Preference number: 5 (lower is better)
Translates to: GKHKTQSYSRALMLNLQLTVGMK*ALETAR
Trigger: CCTGGCCGTCTCCAGTGCCAACTTCATTCCCACGGT...AAGTTGGAGATTGAGCATAAGGGCCCTTGAGTAAGACTGTGTCTTATGCTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555242.1
CDS-3UTR CAA 90 bp TGCTACATCTCCGGAAGAGGTAAGGACTTGAGTCCACACATGGATGCTTTCAAGGATAACTGTTCCACCTaGCCCCTCCTGCCAATGCTC +
Preference number: 5 (lower is better)
Translates to: CYISGRGKDLSPHMDAFKDNCST*PLLPML
Trigger: GAGCATTGGCAGGAGGGGCAAGGTGGAACAGTTATC...CTTGAAAGCATCCATGTGTGGACTCAAGTCCTTACCTCTTCCGGAGATGTAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR CAA 90 bp AGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTTTCTCCTTCAGCAGGTaGGCAATCTCGGTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: RSSLGLQEPSREDVFLLSFSFSR*AISVCK
Trigger: TTTGCAGACCGAGATTGCCAACCTGCTGAAGGAGAA...AGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CAA 90 bp CACGCACAGATAAGGTCCTCCCTAGGTCTACAGGAACCCTCTAGGGAAGATGTGATTTCTGACCTGCAGTaGCAGACTAGGTGTGACTTG +
Preference number: 5 (lower is better)
Translates to: HAQIRSSLGLQEPSREDVISDLQ*QTRCDL
Trigger: CAAGTCACACCTAGTCTGCAACTGCAGGTCAGAAAT...CACATCTTCCCTAGAGGGTTCCTGTAGACCTAGGGAGGACCTTATCTGTGCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555347.1
CDS-3UTR CAA 90 bp AGCATAAGACACAGTCTTACTCAAGGGCCCTTATGCTCAATCTCCAACTTTCCCGATAACTGTTCCACCTaGCCCCTCCTGCCAATGCTC +
Preference number: 5 (lower is better)
Translates to: SIRHSLTQGPLCSISNFPDNCST*PLLPML
Trigger: GAGCATTGGCAGGAGGGGCAAGGTGGAACAGTTATC...GGGAAAGTTGGAGATTGAGCATAAGGGCCCTTGAGTAAGACTGTGTCTTATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555242.1
CDS-3UTR CAA 90 bp CTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACTTGGTCTGTCTCCGCTaGGAGTGTATCAGTCAGCTC +
Preference number: 5 (lower is better)
Translates to: LGLQEPSREDVFLLSVMHLVCLR*ECISQL
Trigger: GAGCTGACTGATACACTCCAAGCGGAGACAGACCAA...GTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CAA 90 bp CTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACCAGCTCGGAAGAGGTAAGGACTaGAGTCCACACATGGATGCT +
Preference number: 5 (lower is better)
Translates to: LQEPSREDVFLLSVMHQLGRGKD*SPHMDA
Trigger: AGCATCCATGTGTGGACTCAAGTCCTTACCTCTTCC...GAGCTGGTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555686.1
CDS-3UTR CAA 90 bp TGTCACTGGGAACAATACACACTCCATGCGTTTTGCTACATCTCCGGAAGAGGTCACACTCCATGCGTTTaGCTACATCTCCGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: CHWEQYTLHAFCYISGRGHTPCV*LHLRKR
Trigger: CCTCTTCCGGAGATGTAGCAAAACGCATGGAGTGTG...ACCTCTTCCGGAGATGTAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR CAA 90 bp AGTGTCACTGGGAACAATACACACTCCATGCGTTTTGCTACATCTCCGGAAGAGCACACTCCATGCGTTTaGCTACATCTCCGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: SVTGNNTHSMRFATSPEEHTPCV*LHLRKR
Trigger: CCTCTTCCGGAGATGTAGCAAAACGCATGGAGTGTG...CTCTTCCGGAGATGTAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR CAA 90 bp AACAAAGAAGAGCCCAGTCTGAAAGCATGCGGTAAGAAACTTAGGGAAGAAACTTGGGATGGAATGGGCTaGGAGCCAGGGCTCCCAGTT +
Preference number: 5 (lower is better)
Translates to: NKEEPSLKACGKKLREETWDGMG*EPGLPV
Trigger: AACTGGGAGCCCTGGCTCCAAGCCCATTCCATCCCA...AGTTTCTTCCCTAAGTTTCTTACCGCATGCTTTCAGACTGGGCTCTTCTTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554617.1
CDS-3UTR CAA 90 bp CTAGGTCTACAGGAACCCTCTAGGGAAGATGTGTTTCTCCTCTCTGTAATGCACTTCTCCTTCAGCAGGTaGGCAATCTCGGTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: LGLQEPSREDVFLLSVMHFSFSR*AISVCK
Trigger: TTTGCAGACCGAGATTGCCAACCTGCTGAAGGAGAA...GTGCATTACAGAGAGGAGAAACACATCTTCCCTAGAGGGTTCCTGTAGACCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS-3UTR CAA 90 bp TTGAGGCCCACAGCCTGGTGTGTTTCACGCACAGATAAGGTCCTCCCTAGGTCTTGCACTAGATACAATTaGAAAATATCCAGCACCAGG +
Preference number: 5 (lower is better)
Translates to: LRPTAWCVSRTDKVLPRSCTRYN*KISSTR
Trigger: CCTGGTGCTGGATATTTTCAAATTGTATCTAGTGCA...AGACCTAGGGAGGACCTTATCTGTGCGTGAAACACACCAGGCTGTGGGCCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303562.9
CDS-3UTR CAA 90 bp AGCATAAGACACAGTCTTACTCAAGGGCCCTTATGCTCAATCTCCAACTTTCCCCAGAGTACCTACCGCTaGGAGTGTATCAGTCAGCTC +
Preference number: 5 (lower is better)
Translates to: SIRHSLTQGPLCSISNFPQSTYR*ECISQL
Trigger: GAGCTGACTGATACACTCCAAGCGGTAGGTACTCTG...GGGAAAGTTGGAGATTGAGCATAAGGGCCCTTGAGTAAGACTGTGTCTTATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555242.1
CDS-3UTR CAA 90 bp TACCAGCTCTCTGAAGTGTCACTGGGAACAATACACACTCCATGCGTTTTGCTATTCTCCTTCAGCAGGTaGGCAATCTCGGTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: YQLSEVSLGTIHTPCVLLFSFSR*AISVCK
Trigger: TTTGCAGACCGAGATTGCCAACCTGCTGAAGGAGAA...TAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGACACTTCAGAGAGCTGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR CAA 90 bp AGCTCTCTGAAGTGTCACTGGGAACAATACACACTCCATGCGTTTTGCTACATCGGAAGAGGTAAGGACTaGAGTCCACACATGGATGCT +
Preference number: 5 (lower is better)
Translates to: SSLKCHWEQYTLHAFCYIGRGKD*SPHMDA
Trigger: AGCATCCATGTGTGGACTCAAGTCCTTACCTCTTCC...GATGTAGCAAAACGCATGGAGTGTGTATTGTTCCCAGTGACACTTCAGAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303562.9
ENST00000555686.1
CDS-3UTR CAA 90 bp GAGCCCAGTCTGAAAGCATGCGGTAAGAAACTTAGGGAAGAAACTATGAGAGTAGACTCAGAGTCTGAGTaGGGATGGAATGGGCTTGGA +
Preference number: 5 (lower is better)
Translates to: EPSLKACGKKLREETMRVDSESE*GWNGLG
Trigger: TCCAAGCCCATTCCATCCCAACTCAGACTCTGAGTC...TACTCTCATAGTTTCTTCCCTAAGTTTCTTACCGCATGCTTTCAGACTGGGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554617.1
CDS GCA 72 bp CAGAGCTGGGTAGGAGCACGGTCACTGCTCGTTCGCTaGGCCGCGGCCGCCGGCTCAGTCTTGGCTTCTCAG +
Preference number: 6 (lower is better)
Translates to: QSWVGARSLLVR*AAAAGSVLASQ
Trigger: CTGAGAAGCCAAGACTGAGCCGGCGGCCGCGGCGCAGCGAACGAGCAGTGACCGTGCTCCTACCCAGCTCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000554212.5
ENST00000554617.1
ENST00000556324.2
CDS CAA 90 bp GGTGAGCTGAGCGAGTCAGAGGAAGGCTCATTGCTGCTGCTGCCCTaGCGGTGGGCAGCTGCACAGCTGGGGAAGGAGTCAGCCTCGGGG +
Preference number: 6 (lower is better)
Translates to: GELSESEEGSLLLLP*RWAAAQLGKESASG
Trigger: CCCCGAGGCTGACTCCTTCCCCAGCTGTGCAGCTGCCCACCGCAAGGGCAGCAGCAGCAATGAGCCTTCCTCTGACTCGCTCAGCTCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS CCA 72 bp CCCTCCTGCCAATGCTCTGCGCTCGGCCTCCTGTCATaGTCTTCACAACGCCAGCCCTGGAGTAAGCCCCAG +
Preference number: 6 (lower is better)
Translates to: PSCQCSALGLLS*SSQRQPWSKPQ
Trigger: CTGGGGCTTACTCCAGGGCTGGCGTTGTGAAGACCATGACAGGAGGCCGAGCGCAGAGCATTGGCAGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000554212.5
ENST00000554617.1
ENST00000555242.1
ENST00000555672.1
ENST00000555686.1
ENST00000557139.1
CDS CCA 72 bp GGTGAAGGCCTCCTCAGACTCCGGGGTGGCAACCTCTaGCAGGCCCCCAGTCAGATCAAGGGAAGCCACAGA +
Preference number: 6 (lower is better)
Translates to: GEGLLRLRGGNL*QAPSQIKGSHR
Trigger: TCTGTGGCTTCCCTTGATCTGACTGGGGGCCTGCCAGAGGTTGCCACCCCGGAGTCTGAGGAGGCCTTCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555672.1
ENST00000555686.1
CDS CCA 72 bp GAAAGCCGACGTGAGCGAGCAGGTTCCGGACACAGGTaGGGCGAGTTCCCAGTGCCGCATGCAGCAGTGAAG +
Preference number: 6 (lower is better)
Translates to: ESRRERAGSGHR*GEFPVPHAAVK
Trigger: CTTCACTGCTGCATGCGGCACTGGGAACTCGCCCCACCTGTGTCCGGAACCTGCTCGCTCACGTCGGCTTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555672.1
ENST00000555686.1
CDS GCA 72 bp GAAGGGGGAACCAATTCTTACTATGGCAAGCGTGCGTaGGCTCAGAGCAAGTCCCGAGCCCCCGAGCCGGCA +
Preference number: 6 (lower is better)
Translates to: EGGTNSYYGKRA*AQSKSRAPEPA
Trigger: TGCCGGCTCGGGGGCTCGGGACTTGCTCTGAGCGCACGCACGCTTGCCATAGTAAGAATTGGTTCCCCCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000556324.2
CDS GCA 72 bp TCCCGAAGGGGGAACCAATTCTTACTATGGCAAGCGTaGGTGCGCTCAGAGCAAGTCCCGAGCCCCCGAGCC +
Preference number: 6 (lower is better)
Translates to: SRRGNQFLLWQA*VRSEQVPSPRA
Trigger: GGCTCGGGGGCTCGGGACTTGCTCTGAGCGCACGCACGCTTGCCATAGTAAGAATTGGTTCCCCCTTCGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000556324.2
CDS CAA 72 bp AGCGAGTCAGAGGAAGGCTCATTGCTGCTGCTGCCCTaGCGGTGGGCAGCTGCACAGCTGGGGAAGGAGTCA +
Preference number: 6 (lower is better)
Translates to: SESEEGSLLLLP*RWAAAQLGKES
Trigger: TGACTCCTTCCCCAGCTGTGCAGCTGCCCACCGCAAGGGCAGCAGCAGCAATGAGCCTTCCTCTGACTCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS TCA 72 bp AGGAAGACGTGTAAGCAGTGCAGCTGGGAGTACAGGTaGCCACCGGAGTGCACAGGGGCTCCAGCTCTGTGG +
Preference number: 6 (lower is better)
Translates to: RKTCKQCSWEYR*PPECTGAPALW
Trigger: CCACAGAGCTGGAGCCCCTGTGCACTCCGGTGGTCACCTGTACTCCCAGCTGCACTGCTTACACGTCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS TCA 72 bp CTGCACAGCTGGGGAAGGAGTCAGCCTCGGGGTAGGTaGAGACGAAGGAAGACGTGTAAGCAGTGCAGCTGG +
Preference number: 6 (lower is better)
Translates to: LHSWGRSQPRGR*RRRKTCKQCSW
Trigger: CCAGCTGCACTGCTTACACGTCTTCCTTCGTCTTCACCTACCCCGAGGCTGACTCCTTCCCCAGCTGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS GCA 72 bp TTCCGGACACAGGTGGGGCGAGTTCCCAGTGCCGCATaGAGCAGTGAAGAGAAACGATCCTGCCACGGACAT +
Preference number: 6 (lower is better)
Translates to: FRTQVGRVPSAA*SSEEKRSCHGH
Trigger: ATGTCCGTGGCAGGATCGTTTCTCTTCACTGCTGCATGCGGCACTGGGAACTCGCCCCACCTGTGTCCGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555672.1
ENST00000555686.1
CDS CCA 72 bp CCATGTCTGGCACGGAGCGGGCTGTCTCAGAGCCACTaGGCCTGGATGATGCTGGGAACAGGAAGTCATCAA +
Preference number: 6 (lower is better)
Translates to: PCLARSGLSQSH*AWMMLGTGSHQ
Trigger: TTGATGACTTCCTGTTCCCAGCATCATCCAGGCCCAGTGGCTCTGAGACAGCCCGCTCCGTGCCAGACATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555686.1
CDS CCA 72 bp GAACCTGCCTCCCGAAGGGGGAACCAATTCTTACTATaGCAAGCGTGCGTGCGCTCAGAGCAAGTCCCGAGC +
Preference number: 6 (lower is better)
Translates to: EPASRRGNQFLL*QACVRSEQVPS
Trigger: GCTCGGGACTTGCTCTGAGCGCACGCACGCTTGCCATAGTAAGAATTGGTTCCCCCTTCGGGAGGCAGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556324.2
CDS CAA 90 bp CACATTCCCAGGAAGAGTACGCTAGAGTTCCTCACCTGTTCCACCTaGCCCCTCCTGCCAATGCTCTGCGCTCGGCCTCCTGTCATGGTC +
Preference number: 6 (lower is better)
Translates to: HIPRKSTLEFLTCST*PLLPMLCARPPVMV
Trigger: GACCATGACAGGAGGCCGAGCGCAGAGCATTGGCAGGAGGGGCAAGGTGGAACAGGTGAGGAACTCTAGCGTACTCTTCCTGGGAATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554617.1
CDS CAA 90 bp TTCAGCTCCATGCTGCTGATGCTCTTGACAGGTTCCACTGAGGGCTaGGGCTCAGGGTCATTGAGGAGAGGCAGGGTGAAGGCCTCCTCA +
Preference number: 6 (lower is better)
Translates to: FSSMLLMLLTGSTEG*GSGSLRRGRVKASS
Trigger: TGAGGAGGCCTTCACCCTGCCTCTCCTCAATGACCCTGAGCCCAAGCCCTCAGTGGAACCTGTCAAGAGCATCAGCAGCATGGAGCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555672.1
ENST00000555686.1
CDS TCA 72 bp TGCTGCAGCGGGAGGATGACGCCTCGTAGTCTGCGTTaGAGCCCGAGAACATCATCGTGGCGGTTAGGCAAA +
Preference number: 6 (lower is better)
Translates to: CCSGRMTPRSLR*SPRTSSWRLGK
Trigger: TTTGCCTAACCGCCACGATGATGTTCTCGGGCTTCAACGCAGACTACGAGGCGTCATCCTCCCGCTGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000554212.5
ENST00000554617.1
ENST00000556324.2
CDS TCA 72 bp CAGCTCCATGCTGCTGATGCTCTTGACAGGTTCCACTaGGGGCTTGGGCTCAGGGTCATTGAGGAGAGGCAG +
Preference number: 6 (lower is better)
Translates to: QLHAADALDRFH*GLGLRVIEERQ
Trigger: CTGCCTCTCCTCAATGACCCTGAGCCCAAGCCCTCAGTGGAACCTGTCAAGAGCATCAGCAGCATGGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303562.9
ENST00000535987.5
ENST00000555347.1
ENST00000555672.1
ENST00000555686.1
CDS GCA 72 bp AGTTCCTCACCTGTTCCACCTTGCCCCTCCTGCCAATaGTCTGCGCTCGGCCTCCTGTCATGGTCTTCACAA +
Preference number: 6 (lower is better)
Translates to: SSSPVPPCPSCQ*SALGLLSWSSQ
Trigger: TTGTGAAGACCATGACAGGAGGCCGAGCGCAGAGCATTGGCAGGAGGGGCAAGGTGGAACAGGTGAGGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554617.1
CDS GCA 72 bp CTGGAGATAACTGTTCCACCTTGCCCCTCCTGCCAATaGTCTGCGCTCGGCCTCCTGTCATGGTCTTCACAA +
Preference number: 6 (lower is better)
Translates to: LEITVPPCPSCQ*SALGLLSWSSQ
Trigger: TTGTGAAGACCATGACAGGAGGCCGAGCGCAGAGCATTGGCAGGAGGGGCAAGGTGGAACAGTTATCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000554212.5
ENST00000555242.1
ENST00000555686.1
CDS GCA 72 bp CTTCTTCTGGAGATAACTGTTCCACCTTGCCCCTCCTaGCAATGCTCTGCGCTCGGCCTCCTGTCATGGTCT +
Preference number: 6 (lower is better)
Translates to: LLLEITVPPCPS*QCSALGLLSWS
Trigger: AGACCATGACAGGAGGCCGAGCGCAGAGCATTGGCAGGAGGGGCAAGGTGGAACAGTTATCTCCAGAAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303562.9
ENST00000554212.5
ENST00000555242.1
ENST00000555686.1
CDS TCA 72 bp ACAGGTGGGGCGAGTTCCCAGTGCCGCATGCAGCAGTaGAGAGAAACGATCCTGCCACGGACATTTCATCTT +
Preference number: 6 (lower is better)
Translates to: TGGASSQCRMQQ*RETILPRTFHL
Trigger: AAGATGAAATGTCCGTGGCAGGATCGTTTCTCTTCACTGCTGCATGCGGCACTGGGAACTCGCCCCACCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555672.1
ENST00000555686.1
CDS GCA 72 bp CCTGGAGTGCAGACCAGAGGTTGCTCAGAACGAACCTaGCTCCCGAAGGGGGAACCAATTCTTACTATGGCA +
Preference number: 6 (lower is better)
Translates to: PGVQTRGCSERT*LPKGEPILTMA
Trigger: TGCCATAGTAAGAATTGGTTCCCCCTTCGGGAGGCAGGTTCGTTCTGAGCAACCTCTGGTCTGCACTCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556324.2
CDS CCA 72 bp GACACGTCTGCTCCAGCTAATGTCAGAGATCCGTCCTaGAGTGCAGACCAGAGGTTGCTCAGAACGAACCTG +
Preference number: 6 (lower is better)
Translates to: DTSAPANVRDPS*SADQRLLRTNL
Trigger: CAGGTTCGTTCTGAGCAACCTCTGGTCTGCACTCCAGGACGGATCTCTGACATTAGCTGGAGCAGACGTGTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556324.2
CDS TCA 72 bp CACGGACATTTCATCTTAAATGTCCCTCATCCTGGATaGAAGGTCTCCCCCTTTTCCTCCCAGGCATTCCGC +
Preference number: 6 (lower is better)
Translates to: HGHFILNVPHPG*KVSPFSSQAFR
Trigger: GCGGAATGCCTGGGAGGAAAAGGGGGAGACCTTTCATCCAGGATGAGGGACATTTAAGATGAAATGTCCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555672.1
ENST00000555686.1
CDS GCA 72 bp CCCAGTGCCGCATGCAGCAGTGAAGAGAAACGATCCTaGCACGGACATTTCATCTTAAATGTCCCTCATCCT +
Preference number: 6 (lower is better)
Translates to: PSAACSSEEKRS*HGHFILNVPHP
Trigger: AGGATGAGGGACATTTAAGATGAAATGTCCGTGGCAGGATCGTTTCTCTTCACTGCTGCATGCGGCACTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555672.1
ENST00000555686.1
CDS TCA 72 bp AAGATCCTCAGCAAGAGAACAAAGAAGAGCCCAGTCTaGAAGCATGCGGTAAGAAACTTAGGGAAGAAACTA +
Preference number: 6 (lower is better)
Translates to: KILSKRTKKSPV*KHAVRNLGKKL
Trigger: TAGTTTCTTCCCTAAGTTTCTTACCGCATGCTTTCAGACTGGGCTCTTCTTTGTTCTCTTGCTGAGGATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555347.1