RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FOCAD (Homo sapiens)

Ensembl gene IDs: ENSG00000188352

Ensembl transcript IDs: ENST00000338382.10, ENST00000380249.5, ENST00000603044.5, ENST00000603492.1, ENST00000603552.1, ENST00000603610.1, ENST00000603631.1, ENST00000603648.1, ENST00000603695.1, ENST00000603844.1, ENST00000604036.1, ENST00000604103.1, ENST00000604254.5, ENST00000604828.1, ENST00000605031.5, ENST00000605086.5, ENST00000605852.1

Found 698 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATaGACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTG +
Preference number: 1 (lower is better)
Translates to: SKFLFQSQLARVLKQ*TPLLGGMCQAVSDV
Trigger: CACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
3UTR CCA 90 bp ACTCAGTGTCTTCAGAATGAGAGGTCTTGTGTCACAACTCAGCTTTaGAGAGAGAGCATTCCAAGTGGAGCGAATGCAAACAACCTCAGC +
Preference number: 1 (lower is better)
Translates to: TQCLQNERSCVTTQL*RESIPSGANANNLS
Trigger: GCTGAGGTTGTTTGCATTCGCTCCACTTGGAATGCTCTCTCTCCAAAGCTGAGTTGTGACACAAGACCTCTCATTCTGAAGACACTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603648.1
3UTR TCA 90 bp AAAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTaGTGTGGCCATCTTTTCATGACCCTTAACTCTCTGCATCATGTC +
Preference number: 1 (lower is better)
Translates to: KAMHSSLRRHVSSCQ*CGHLFMTLNSLHHV
Trigger: GACATGATGCAGAGAGTTAAGGGTCATGAAAAGATGGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
3UTR TCA 90 bp TTAAGGAAGGAACTAGAGAAAATAGTTCACTCAGTGTCTTCAGAATaGGAGGTCTTGTGTCACAACTCAGCTTTGGAGAGAGAGCATTCC +
Preference number: 1 (lower is better)
Translates to: LRKELEKIVHSVSSE*EVLCHNSALEREHS
Trigger: GGAATGCTCTCTCTCCAAAGCTGAGTTGTGACACAAGACCTCTCATTCTGAAGACACTGAGTGAACTATTTTCTCTAGTTCCTTCCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603648.1
3UTR-3UTR TCA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGTTTTCCTCATCCAGCTaGGAATGCTGCTGGTTACTG +
Preference number: 2 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMFSSSS*ECCWLL
Trigger: CAGTAACCAGCAGCATTCTCAGCTGGATGAGGAAAA...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
3UTR-3UTR TCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGTGGCCATCTTTTCATaGCCCTTAACTCTCTGCATC +
Preference number: 2 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPVAIFS*PLTLCI
Trigger: GATGCAGAGAGTTAAGGGTCATGAAAAGATGGCCAC...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
3UTR-3UTR TCA 90 bp TATCTTCTAAGCCTGTCTCAGTCAGATGATCTCATATTCAGTTGTATTGACCGTGCTGCTGGAGTAGCTTaGTCAGGCTTGGTGCATTCA +
Preference number: 2 (lower is better)
Translates to: YLLSLSQSDDLIFSCIDRAAGVA*SGLVHS
Trigger: TGAATGCACCAAGCCTGATCAAGCTACTCCAGCAGC...ACGGTCAATACAACTGAATATGAGATCATCTGACTGAGACAGGCTTAGAAGATA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603648.1
3UTR-3UTR CCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGAAGCTGTCAGTGATGTaGCCATCTTTTCATGACCCT +
Preference number: 2 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPKLSVM*PSFHDP
Trigger: AGGGTCATGAAAAGATGGCCACATCACTGACAGCTT...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
3UTR-3UTR CCA 90 bp GAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCAAGCTGTCAGTGATGTaGCCATCTTTTCATGACCCT +
Preference number: 2 (lower is better)
Translates to: ELKPNKENPSSCFSLNWPKLSVM*PSFHDP
Trigger: AGGGTCATGAAAAGATGGCCACATCACTGACAGCTT...GGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
3UTR-3UTR GCA 90 bp TATCTTCTAAGCCTGTCTCAGTCAGATGATCTCATATTCAGTTGTATTGACCGTTCCAAGTGGAGCGAATaGAAACAACCTCAGCTTGAC +
Preference number: 2 (lower is better)
Translates to: YLLSLSQSDDLIFSCIDRSKWSE*KQPQLD
Trigger: GTCAAGCTGAGGTTGTTTGCATTCGCTCCACTTGGA...ACGGTCAATACAACTGAATATGAGATCATCTGACTGAGACAGGCTTAGAAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603648.1
3UTR-3UTR GCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCCGGGTACTAAAGCAATaGACTCCTCTCTTAGGAGGC +
Preference number: 2 (lower is better)
Translates to: ENLHIELKPNKENPSSCFRVLKQ*TPLLGG
Trigger: GCCTCCTAAGAGAGGAGTGCATTGCTTTAGTACCCG...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
3UTR-3UTR TCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAATTTTCCTCATCCAGCTaGGAATGCTGCTGGTTACTG +
Preference number: 2 (lower is better)
Translates to: SREKIISSSFHKENLHIEFSSSS*ECCWLL
Trigger: CAGTAACCAGCAGCATTCTCAGCTGGATGAGGAAAA...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
3UTR-3UTR TCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAAGTGGCCATCTTTTCATaGCCCTTAACTCTCTGCATC +
Preference number: 2 (lower is better)
Translates to: SREKIISSSFHKENLHIEVAIFS*PLTLCI
Trigger: GATGCAGAGAGTTAAGGGTCATGAAAAGATGGCCAC...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
3UTR-3UTR TCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCGTGTCAAGCTGTCAGTaGTGTGGCCATCTTTTCATG +
Preference number: 2 (lower is better)
Translates to: ENLHIELKPNKENPSSCFVSSCQ*CGHLFM
Trigger: CATGAAAAGATGGCCACATCACTGACAGCTTGACAC...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
3UTR-3UTR TCA 90 bp AAGTATCTTCTAAGCCTGTCTCAGTCAGATGATCTCATATTCAGTTGTATTGACTCAGTGTCTTCAGAATaGGAGGTCTTGTGTCACAAC +
Preference number: 2 (lower is better)
Translates to: KYLLSLSQSDDLIFSCIDSVSSE*EVLCHN
Trigger: GTTGTGACACAAGACCTCTCATTCTGAAGACACTGA...GTCAATACAACTGAATATGAGATCATCTGACTGAGACAGGCTTAGAAGATACTT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603648.1
3UTR GCA 72 bp CTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATaGACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTC +
Preference number: 3 (lower is better)
Translates to: LFQSQLARVLKQ*TPLLGGMCQAV
Trigger: GACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
3UTR TCA 72 bp CACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTaGTGTGGCCATCTTTTCATGACCCTTAACTCTCTG +
Preference number: 3 (lower is better)
Translates to: HSSLRRHVSSCQ*CGHLFMTLNSL
Trigger: CAGAGAGTTAAGGGTCATGAAAAGATGGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
3UTR TCA 72 bp ATGTGTCAAGCTGTCAGTGATGTGGCCATCTTTTCATaGCCCTTAACTCTCTGCATCATGTCTCAGCAATAC +
Preference number: 3 (lower is better)
Translates to: MCQAVSDVAIFS*PLTLCIMSQQY
Trigger: GTATTGCTGAGACATGATGCAGAGAGTTAAGGGTCATGAAAAGATGGCCACATCACTGACAGCTTGACACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
3UTR-3UTR CAA 90 bp CAGATGATCTCATATTCAGTTGTATTGACCGTTAAGGAAGGAACTAGAGAAAATGGCTGCTGGAGTAGCTaGATCAGGCTTGGTGCATTC +
Preference number: 3 (lower is better)
Translates to: QMISYSVVLTVKEGTRENGCWSS*IRLGAF
Trigger: GAATGCACCAAGCCTGATCAAGCTACTCCAGCAGCC...ATTTTCTCTAGTTCCTTCCTTAACGGTCAATACAACTGAATATGAGATCATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603648.1
3UTR TCA 72 bp GAACTAGAGAAAATAGTTCACTCAGTGTCTTCAGAATaGGAGGTCTTGTGTCACAACTCAGCTTTGGAGAGA +
Preference number: 3 (lower is better)
Translates to: ELEKIVHSVSSE*EVLCHNSALER
Trigger: TCTCTCCAAAGCTGAGTTGTGACACAAGACCTCTCATTCTGAAGACACTGAGTGAACTATTTTCTCTAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603648.1
CDS-3UTR TCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCGCCGGGCCATTCTCCTaGTGCCATGGCAACCAACTG +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAAGPFS*CHGNQL
Trigger: CAGTTGGTTGCCATGGCATCAGGAGAATGGCCCGGC...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCGAACCTCCTGCAGAGTaGCCCTGTGCATTGGACTCC +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAEPPAE*PCALDS
Trigger: GGAGTCCAATGCACAGGGTCACTCTGCAGGAGGTTC...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCCAGCTTCCGGAGCAATaGTGCTACGTGAACGCGGGA +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAQLPEQ*CYVNAG
Trigger: TCCCGCGTTCACGTAGCAGCATTGCTCCGGAAGCTG...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCGGCTGGGCAGTTTCATaGCCTGGCTCAGACCGTGTA +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAGWAVS*PGSDRV
Trigger: TACACGGTCTGAGCCAGGCCATGAAACTGCCCAGCC...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCACGCCCGTATTGGCATaGCTCACAATCCGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVATPVLA*LTIRAW
Trigger: CCAGGCACGGATTGTGAGCCATGCCAATACGGGCGT...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCAAGGAAGCTTGGTACTaGCCCAGCCGGGCCATTCTC +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAKEAWY*PSRAIL
Trigger: GAGAATGGCCCGGCTGGGCCAGTACCAAGCTTCCTT...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCGGCTGCTGTGGCTCATaGGGGACAGAACAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAGCCGS*GTEQVQ
Trigger: TTGGACTTGTTCTGTCCCTCATGAGCCACAGCAGCC...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCCTACCAAGGCCACCATaGCATGAAGAGCTGCCAGAC +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVALPRPP*HEELPD
Trigger: GTCTGGCAGCTCTTCATGGCATGGTGGCCTTGGTAG...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTAAGGAAGCTTGGTACTaGCCCAGCCGGGCCATTCTC +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLKEAWY*PSRAIL
Trigger: GAGAATGGCCCGGCTGGGCCAGTACCAAGCTTCCTT...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCCTGCCAAGGAAGCTTaGTACTGGCCCAGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMPAKEA*YWPSRA
Trigger: GGCCCGGCTGGGCCAGTACCAAGCTTCCTTGGCAGG...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCCTGACACACAGCAGCTaGAGACTCATCTGGGTAAGC +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVALTHSS*RLIWVS
Trigger: GCTTACCCAGATGAGTCTTCAGCTGCTGTGTGTCAG...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR TCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCGCTGCTGGAGTAGCTTaGTCAGGCTTGGTGCATTCA +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAAAGVA*SGLVHS
Trigger: TGAATGCACCAAGCCTGATCAAGCTACTCCAGCAGC...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCCAAGTGAAGTCTGCTTaGAACTTCGCCCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAQVKSA*NFALCW
Trigger: CCAGCAGAGGGCGAAGTTTCAAGCAGACTTCACTTG...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCAAGCCAGACTGCATTTaGCTGGAGACCAATCACCCC +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAKPDCI*LETNHP
Trigger: GGGGTGATTGGTCTCCAGTCAAATGCAGTCTGGCTT...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp GAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGCAACCAACTGGCACTaGGGCCGAGGAGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: ELKPNKENPSSCFSLNWPATNWH*GRGGEG
Trigger: CCCCTCTCCTCCTCGGCCTCAGTGCCAGTTGGTTGC...GGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCATCCTGAGCAACGAGTaGCACCAGACCTTCACAGCA +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAILSNE*HQTFTA
Trigger: TGCTGTGAAGGTCTGGTGGCACTCGTTGCTCAGGAT...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR GCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCTACCGGACTCTCCTTTaGAGCTGCCTTGGTGATCTC +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAYRTLL*SCLGDL
Trigger: GAGATCACCAAGGCAGCTGCAAAGGAGAGTCCGGTA...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTCTACCAAGGCCACCATaGCATGAAGAGCTGCCAGAC +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLLPRPP*HEELPD
Trigger: GTCTGGCAGCTCTTCATGGCATGGTGGCCTTGGTAG...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTACCTCTTTCTCACGGTaGTGCACAGCAACGCTCAGC +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLTSFSR*CTATLS
Trigger: GCTGAGCGTTGCTGTGCAGCACCGTGAGAAAGAGGT...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCACTGTGGATCAGTGGTaGTGTCACCCACAAGCCCAA +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVATVDQW*CHPQAQ
Trigger: TTGGGCTTGTGGGTGACACCACCACTGATCCACAGT...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTCAGACTGTGGATCAGTaGTGGTGTCACCCACAAGCC +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLQTVDQ*WCHPQA
Trigger: GGCTTGTGGGTGACACCACCACTGATCCACAGTCTG...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGCCTGCCAAGGAAGCTTaGTACTGGCCCAGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPPAKEA*YWPSRA
Trigger: GGCCCGGCTGGGCCAGTACCAAGCTTCCTTGGCAGG...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCGGTCTGTTCCTTCCATaGCTCTTTCTGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAGLFLP*LFLQQQ
Trigger: CTGCTGCTGCAGAAAGAGCCATGGAAGGAACAGACC...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCTGGATTTGCACGGCTTaGGACTCATCAGCACTTGGT +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAWICTA*DSSALG
Trigger: ACCAAGTGCTGATGAGTCTCAAGCCGTGCAAATCCA...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTATCCTGAGCAACGAGTaGCACCAGACCTTCACAGCA +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLILSNE*HQTFTA
Trigger: TGCTGTGAAGGTCTGGTGGCACTCGTTGCTCAGGAT...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR GCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCAGGTTTAGAGCCAACTaGTGCCTAGAGGGACCTTCT +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVARFRAN*CLEGPS
Trigger: AGAAGGTCCCTCTAGGCAGCAGTTGGCTCTAAACCT...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR GCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCCCCATTGGACTTCCTTaGCCACCGAAAGAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAPIGLP*PPKEKV
Trigger: TACCTTCTCTTTCGGTGGGCAAGGAAGTCCAATGGG...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTCGACGACAGCAAGGCTaGTTAGAGCTAACAGCGCAT +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLRRQQG*LELTAH
Trigger: ATGCGCTGTTAGCTCTAAGCAGCCTTGCTGTCGTCG...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGCAGCTTCCGGAGCAATaGTGCTACGTGAACGCGGGA +
Preference number: 4 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGQLPEQ*CYVNAG
Trigger: TCCCGCGTTCACGTAGCAGCATTGCTCCGGAAGCTG...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCGCCTGGTATAAGCTGTaGAGAATCATCCAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAAWYKL*RIIQAN
Trigger: GTTGGCCTGGATGATTCTGCACAGCTTATACCAGGC...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCTGCAAGCCAGGCCTGTaGAAGAAAAATTGCACGGTG +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVACKPGL*KKNCTV
Trigger: CACCGTGCAATTTTTCTTCCACAGGCCTGGCTTGCA...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTGGCAGTTTCATGGCCTaGCTCAGACCGTGTAAAGCA +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLGSFMA*LRPCKA
Trigger: TGCTTTACACGGTCTGAGCCAGGCCATGAAACTGCC...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGGGCTGGGCAGTTTCATaGCCTGGCTCAGACCGTGTA +
Preference number: 4 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGGWAVS*PGSDRV
Trigger: TACACGGTCTGAGCCAGGCCATGAAACTGCCCAGCC...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTAGTGACCCTGTGCATTaGACTCCTGCCAAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLSDPVH*TPAKEA
Trigger: AGCTTCCTTGGCAGGAGTCCAATGCACAGGGTCACT...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCAAGATTGGCTTCTGCTaGCTTGCTGGAGTCTGTAGA +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAKIGFC*LAGVCR
Trigger: TCTACAGACTCCAGCAAGTCAGCAGAAGCCAATCTT...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR TCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGCCGGGCCATTCTCCTaGTGCCATGGCAACCAACTG +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPAGPFS*CHGNQL
Trigger: CAGTTGGTTGCCATGGCATCAGGAGAATGGCCCGGC...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCGTGGCCATCTTTTCATaGCCCTTAACTCTCTGCATC +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAVAIFS*PLTLCI
Trigger: GATGCAGAGAGTTAAGGGTCATGAAAAGATGGCCAC...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTCCCATTGGACTTCCTTaGCCACCGAAAGAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLPIGLP*PPKEKV
Trigger: TACCTTCTCTTTCGGTGGGCAAGGAAGTCCAATGGG...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGCCTCCTGAAACGTTCTaGTCTGGCTCCCGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGPPETF*SGSRCH
Trigger: ATGACAGCGGGAGCCAGAGCAGAACGTTTCAGGAGG...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCCAGGGAGTAGTTTGCTaGCCAAGTCTTCAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAQGVVC*PSLQLF
Trigger: GAAAAGCTGAAGACTTGGGCAGCAAACTACTCCCTG...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTGCCTGGTATAAGCTGTaGAGAATCATCCAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLAWYKL*RIIQAN
Trigger: GTTGGCCTGGATGATTCTGCACAGCTTATACCAGGC...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTGCAGAGTGACCCTGTaGATTGGACTCCTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGCRVTL*IGLLPR
Trigger: CCTTGGCAGGAGTCCAATGCACAGGGTCACTCTGCA...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTAGAGTGAGAACCTCCTaGAGAGTGACCCTGTGCATT +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLRVRTS*RVTLCI
Trigger: AATGCACAGGGTCACTCTGCAGGAGGTTCTCACTCT...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTATCAGATTTGGCACCTaGGAGGAATCTGCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLIRFGT*EESAWA
Trigger: AGCCCAAGCAGATTCCTCCCAGGTGCCAAATCTGAT...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTAACTTCGCCCTCTGCTaGCCATCAGTCTGTTCAATG +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLNFALC*PSVCSM
Trigger: CATTGAACAGACTGATGGCCAGCAGAGGGCGAAGTT...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTGTTTCCCAGGTAACCTaGCAGTCAGCATGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLVSQVT*QSACSG
Trigger: TCCTGAACATGCTGACTGCCAGGTTACCTGGGAAAC...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCTGGGATGACTGTGCCTaGGTCACCATAATTTCAAGG +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAWDDCA*VTIISR
Trigger: CCTTGAAATTATGGTGACCCAGGCACAGTCATCCCA...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGAGTGCAGCTGCATTCTaGGATGACTGTGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGSAAAF*DDCAWV
Trigger: GACCCAGGCACAGTCATCCCAGAATGCAGCTGCACT...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCTTGCTCTTAGTAACCTaGGCGATCCGATTGGCATCA +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVALLLVT*AIRLAS
Trigger: TGATGCCAATCGGATCGCCCAGGTTACTAAGAGCAA...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTATTCTCCTGATGCCATaGCAACCAACTGGCACTGAG +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLILLMP*QPTGTE
Trigger: CTCAGTGCCAGTTGGTTGCCATGGCATCAGGAGAAT...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCATGACCCACAGCCTGTaGTTGGATAAGAGAATTTGG +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAMTHSL*LDKRIW
Trigger: CCAAATTCTCTTATCCAATCACAGGCTGTGGGTCAT...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR TCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTCAAAGAACCTGGGGTTaGAGTAAGACTTTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLQRTWG*SKTFSR
Trigger: CCTGCTGAAAGTCTTACTTCAACCCCAGGTTCTTTG...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR TCA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGCTGACACACAGCAGCTaGAGACTCATCTGGGTAAGC +
Preference number: 4 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGLTHSS*RLIWVS
Trigger: GCTTACCCAGATGAGTCTTCAGCTGCTGTGTGTCAG...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR TCA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGGCTGCTGGAGTAGCTTaGTCAGGCTTGGTGCATTCA +
Preference number: 4 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGAAGVA*SGLVHS
Trigger: TGAATGCACCAAGCCTGATCAAGCTACTCCAGCAGC...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTCAAAGGGGGAGTGAGTaGCAACAGTTTGAGATAGCA +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLQRGSE*QQFEIA
Trigger: TGCTATCTCAAACTGTTGTCACTCACTCCCCCTTTG...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTGCACGGTGCCACTCTaGAAGCTGGATATGAACCTC +
Preference number: 4 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGCTVPL*KLDMNL
Trigger: GAGGTTCATATCCAGCTTTCAGAGTGGCACCGTGCA...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGGGCTGCTGTGGCTCATaGGGGACAGAACAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMGCCGS*GTEQVQ
Trigger: TTGGACTTGTTCTGTCCCTCATGAGCCACAGCAGCC...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGAAGGCCACCATGCCATaGAGAGCTGCCAGACAAAGC +
Preference number: 4 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMKATMP*RAARQS
Trigger: GCTTTGTCTGGCAGCTCTTCATGGCATGGTGGCCTT...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCAGCCGGGCCATTCTCCTaGTGCCATGGCAACCAACTG +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPAGPFS*CHGNQL
Trigger: CAGTTGGTTGCCATGGCATCAGGAGAATGGCCCGGC...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGAACCTCCTGCAGAGTaGCCCTGTGCATTGGACTCC +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPEPPAE*PCALDS
Trigger: GGAGTCCAATGCACAGGGTCACTCTGCAGGAGGTTC...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTTTTTCCTCATCCAGCTaGGAATGCTGCTGGTTACTG +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLFSSSS*ECCWLL
Trigger: CAGTAACCAGCAGCATTCTCAGCTGGATGAGGAAAA...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTGTGTCAAGCTGTCAGTaGTGTGGCCATCTTTTCATG +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLVSSCQ*CGHLFM
Trigger: CATGAAAAGATGGCCACATCACTGACAGCTTGACAC...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGCTTCCGGAGCAATGCTaGTACGTGAACGCGGGACTG +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPLPEQC*YVNAGL
Trigger: CAGTCCCGCGTTCACGTAGCAGCATTGCTCCGGAAG...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCTACCAAGGCCACCATaGCATGAAGAGCTGCCAGAC +
Preference number: 4 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMLPRPP*HEELPD
Trigger: GTCTGGCAGCTCTTCATGGCATGGTGGCCTTGGTAG...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTCCAGACAAAGCATTGTaGGAGTGCCCTCTGTTAGAA +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLPDKAL*ECPLLE
Trigger: TTCTAACAGAGGGCACTCCCACAATGCTTTGTCTGG...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGCTGGGCAGTTTCATaGCCTGGCTCAGACCGTGTA +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPGWAVS*PGSDRV
Trigger: TACACGGTCTGAGCCAGGCCATGAAACTGCCCAGCC...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTCCTGGGCGATCCGATTaGCATCATCATCTGTCATTT +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLPGRSD*HHHLSF
Trigger: AAATGACAGATGATGATGCCAATCGGATCGCCCAGG...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTTTGCTCTTAGTAACCTaGGCGATCCGATTGGCATCA +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLLLLVT*AIRLAS
Trigger: TGATGCCAATCGGATCGCCCAGGTTACTAAGAGCAA...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGACGCCCGTATTGGCATaGCTCACAATCCGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPTPVLA*LTIRAW
Trigger: CCAGGCACGGATTGTGAGCCATGCCAATACGGGCGT...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGAGTGACCCTGTGCATTaGACTCCTGCCAAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGSDPVH*TPAKEA
Trigger: AGCTTCCTTGGCAGGAGTCCAATGCACAGGGTCACT...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTATGACCCACAGCCTGTaGTTGGATAAGAGAATTTGG +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLMTHSL*LDKRIW
Trigger: CCAAATTCTCTTATCCAATCACAGGCTGTGGGTCAT...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR TCA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGTCAGCAAGCGCAAAGTaGCAGCTCTTAGTCGTGGTG +
Preference number: 4 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMSASAK*QLLVVV
Trigger: CACCACGACTAAGAGCTGTCACTTTGCGCTTGCTGA...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCATCTTTTCAGGCAGATaGAGAATGGTGTGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAIFSGR*RMVCSP
Trigger: AGGAGAACACACCATTCTTCATCTGCCTGAAAAGAT...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGTGCACGGTGCCACTCTaGAAGCTGGATATGAACCTC +
Preference number: 4 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMCTVPL*KLDMNL
Trigger: GAGGTTCATATCCAGCTTTCAGAGTGGCACCGTGCA...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGAGCAATGCTGCTACGTaGACGCGGGACTGCATTTGG +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPSNAAT*TRDCIW
Trigger: CCAAATGCAGTCCCGCGTTCACGTAGCAGCATTGCT...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGAGCCAGGGCAAAACCTaGAGTCTGCTGGCTATTCTC +
Preference number: 4 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMSQGKT*SLLAIL
Trigger: GAGAATAGCCAGCAGACTTCAGGTTTTGCCCTGGCT...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCCACACAGACAATCCATaGACTATGTTTCCTAAAGCC +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAHTDNP*TMFPKA
Trigger: GGCTTTAGGAAACATAGTTCATGGATTGTCTGTGTG...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTCTGTTAGAACAATTCTaGTCCAGGCAGGGAGTAGTT +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLLLEQF*SRQGVV
Trigger: AACTACTCCCTGCCTGGATCAGAATTGTTCTAACAG...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGAAGGCCACCATGCCATaGAGAGCTGCCAGACAAAGC +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPKATMP*RAARQS
Trigger: GCTTTGTCTGGCAGCTCTTCATGGCATGGTGGCCTT...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCGATAGAGTAGATAGATaGAGATGTCCAAGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVADRVDR*RCPRSQ
Trigger: CTGGCTTCTTGGACATCTTCATCTATCTACTCTATC...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAAGCAACCAACTGGCACTaGGGCCGAGGAGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIEATNWH*GRGGEG
Trigger: CCCCTCTCCTCCTCGGCCTCAGTGCCAGTTGGTTGC...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCAGAACCTCCTGCAGAGTaGCCCTGTGCATTGGACTCC +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPEPPAE*PCALDS
Trigger: GGAGTCCAATGCACAGGGTCACTCTGCAGGAGGTTC...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTAACATAGCTGAACTCTaGATGATCCTGAGCAACGAG +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLNIAEL*MILSNE
Trigger: CTCGTTGCTCAGGATCATGCAGAGTTCAGCTATGTT...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR GCA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGAACGCTGTCAGCTGCTaGAAAAACACTGGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGNAVSC*KNTGQQ
Trigger: TTGCTGGCCAGTGTTTTTGCAGCAGCTGACAGCGTT...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR GCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTAGCTGCCAACATATCTaGACCATGTTGATATGGCCT +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLSCQHI*TMLIWP
Trigger: AGGCCATATCAACATGGTGCAGATATGTTGGCAGCT...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTCCGGAGCAATGCTaGTACGTGAACGCGGGACTG +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPLPEQC*YVNAGL
Trigger: CAGTCCCGCGTTCACGTAGCAGCATTGCTCCGGAAG...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACAGCTTCCGGAGCAATaGTGCTACGTGAACGCGGGA +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPQLPEQ*CYVNAG
Trigger: TCCCGCGTTCACGTAGCAGCATTGCTCCGGAAGCTG...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGAGGCAGGGAGTAGTTTaGTGCCCAAGTCTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGRQGVV*CPSLQL
Trigger: AAGCTGAAGACTTGGGCAGCAAACTACTCCCTGCCT...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGACCTCTTTCTCACGGTaGTGCACAGCAACGCTCAGC +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPTSFSR*CTATLS
Trigger: GCTGAGCGTTGCTGTGCAGCACCGTGAGAAAGAGGT...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCTGCAACCACTGCGGTTaGAAATATCAGCAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVACNHCG*KYQQEE
Trigger: TTCTTCTTGCTGATATTTGCAACCGCAGTGGTTGCA...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGTGCAGAGTGACCCTGTaGATTGGACTCCTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPCRVTL*IGLLPR
Trigger: CCTTGGCAGGAGTCCAATGCACAGGGTCACTCTGCA...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp GAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCTGCAGAGTGACCCTGTaGATTGGACTCCTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: ELKPNKENPSSCFSLNWPCRVTL*IGLLPR
Trigger: CCTTGGCAGGAGTCCAATGCACAGGGTCACTCTGCA...GGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTCAGCAGAGAGGACTTTaGGATTTTCTGATCCTCAGT +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLQQRGL*DFLILS
Trigger: ACTGAGGATCAGAAAATCCCAAAGTCCTCTCTGCTG...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGCTACAGTCTTTCCTTaGTCTGAGCGGGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPATVFP*SERAPP
Trigger: AGGAGGTGCCCGCTCAGACCAAGGAAAGACTGTAGC...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTGCAAGCCAGGCCTGTaGAAGAAAAATTGCACGGTG +
Preference number: 4 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGCKPGL*KKNCTV
Trigger: CACCGTGCAATTTTTCTTCCACAGGCCTGGCTTGCA...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTGCATTTGGCTGCTGTaGCTCATGAGGGACAGAACA +
Preference number: 4 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGCIWLL*LMRDRT
Trigger: TGTTCTGTCCCTCATGAGCCACAGCAGCCAAATGCA...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCAACGCGGGACTGCATTTaGCTGCTGTGGCTCATGAGG +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPTRDCI*LLWLMR
Trigger: CCTCATGAGCCACAGCAGCCAAATGCAGTCCCGCGT...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGCAGACTGCATTTGACTaGAGACCAATCACCCCAGAG +
Preference number: 4 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGQTAFD*RPITPE
Trigger: CTCTGGGGTGATTGGTCTCCAGTCAAATGCAGTCTG...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGCAGACTGTGGATCAGTaGTGGTGTCACCCACAAGCC +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPQTVDQ*WCHPQA
Trigger: GGCTTGTGGGTGACACCACCACTGATCCACAGTCTG...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAACCTGCCAAGGAAGCTTaGTACTGGCCCAGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIEPAKEA*YWPSRA
Trigger: GGCCCGGCTGGGCCAGTACCAAGCTTCCTTGGCAGG...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTCTCATCTGGGTAAGCTaGATTTTCCAGAAAACAGGA +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLLIWVS*IFQKTG
Trigger: TCCTGTTTTCTGGAAAATTCAGCTTACCCAGATGAG...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR TCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCGTGGTCTTCCCAATTTaGACATCAAAACTGGAATCA +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAVVFPI*TSKLES
Trigger: TGATTCCAGTTTTGATGTTCAAATTGGGAAGACCAC...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR TCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGCTGCTGGAGTAGCTTaGTCAGGCTTGGTGCATTCA +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPAAGVA*SGLVHS
Trigger: TGAATGCACCAAGCCTGATCAAGCTACTCCAGCAGC...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGCAAAGGGGGAGTGAGTaGCAACAGTTTGAGATAGCA +
Preference number: 4 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGQRGSE*QQFEIA
Trigger: TGCTATCTCAAACTGTTGTCACTCACTCCCCCTTTG...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTCCTTTTAATGCAGAGTaGTATATCCCACGAGGCATA +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLPFNAE*YIPRGI
Trigger: TATGCCTCGTGGGATATATCACTCTGCATTAAAAGG...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGCAAGTGAAGTCTGCTTaGAACTTCGCCCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPQVKSA*NFALCW
Trigger: CCAGCAGAGGGCGAAGTTTCAAGCAGACTTCACTTG...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTATGTACAAGAGCAAGTaGAGTCTGCTTGAAACTTCG +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLMYKSK*SLLETS
Trigger: CGAAGTTTCAAGCAGACTTCACTTGCTCTTGTACAT...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTTCTGAAAGCTGGATATaGACCTCATGTACAAGAGCA +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLSESWI*TSCTRA
Trigger: TGCTCTTGTACATGAGGTTCATATCCAGCTTTCAGA...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGTTGCAGCTGCCTTGGTaGTCTCATCAGTCAGCATGT +
Preference number: 4 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMLQLPW*SHQSAC
Trigger: ACATGCTGACTGATGAGATCACCAAGGCAGCTGCAA...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGAGCCAGGGCAAAACCTaGAGTCTGCTGGCTATTCTC +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPSQGKT*SLLAIL
Trigger: GAGAATAGCCAGCAGACTTCAGGTTTTGCCCTGGCT...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCGAGACACTAATGACCTaGGTTAAGGTTCTAATGACT +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAETLMT*VKVLMT
Trigger: AGTCATTAGAACCTTAACTCAGGTCATTAGTGTCTC...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCAATCCCTGGACTGTGCTaGGAGGGCTTCTTTAGGGCT +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPIPGLC*EGFFRA
Trigger: AGCCCTAAAGAAGCCCTCTCAGCACAGTCCAGGGAT...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTTTTCCTCATCCAGCTaGGAATGCTGCTGGTTACTG +
Preference number: 4 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGFSSSS*ECCWLL
Trigger: CAGTAACCAGCAGCATTCTCAGCTGGATGAGGAAAA...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGGTGGCCATCTTTTCATaGCCCTTAACTCTCTGCATC +
Preference number: 4 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGVAIFS*PLTLCI
Trigger: GATGCAGAGAGTTAAGGGTCATGAAAAGATGGCCAC...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTTTCTGCATTTCCATCTaGGATACCGAGTTCATCTCA +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLFCISI*DTEFIS
Trigger: TGAGATGAACTCGGTATCTCAGATGGAAATGCAGAA...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380249.5
CDS-3UTR TCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCCTACAGCTCCCAGCGTaGGCGATGGAGAAGACGGTG +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVLQLPA*AMEKTV
Trigger: CACCGTCTTCTCCATCGCTCACGCTGGGAGCTGTAG...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380249.5
CDS-3UTR GCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTGCTTTCTCCAACAGTTaGTATGGGTTTCATCACTAC +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLAFSNS*YGFHHY
Trigger: GTAGTGATGAAACCCATAGCAACTGTTGGAGAAAGC...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTTGCAACCACTGCGGTTaGAAATATCAGCAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLCNHCG*KYQQEE
Trigger: TTCTTCTTGCTGATATTTGCAACCGCAGTGGTTGCA...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp GAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCAGTGTGGTCAGCCCATaGAACCACTGCGGTTGCAAA +
Preference number: 4 (lower is better)
Translates to: ELKPNKENPSSCFSLNWPSVVSP*NHCGCK
Trigger: TTTGCAACCGCAGTGGTTGCATGGGCTGACCACACT...GGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTTGTTCACCAACCATATaGTCTGGTCCATACAGCTTT +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLCSPTI*SGPYSF
Trigger: AAAGCTGTATGGACCAGAGCATATGGTTGGTGAACA...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCCCCACAGCCTGTGATTaGATAAGAGAATTTGGAAAT +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAPTACD*IREFGN
Trigger: ATTTCCAAATTCTCTTATCCAATCACAGGCTGTGGG...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCCTCTTAGTCGTGGTGTaGTTCCAAGTAGTTGTATTA +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVALLVVV*FQVVVL
Trigger: TAATACAACTACTTGGAACCACACCACGACTAAGAG...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCAGCTACAGTCTTTCCTTaGTCTGAGCGGGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPATVFP*SERAPP
Trigger: AGGAGGTGCCCGCTCAGACCAAGGAAAGACTGTAGC...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGAGAGAAGTTGCCCTCTaGGTTGGTAATGGCTATCCA +
Preference number: 4 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGREVAL*VGNGYP
Trigger: TGGATAGCCATTACCAACCCAGAGGGCAACTTCTCT...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGGTTTCCCAGGTAACCTaGCAGTCAGCATGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMVSQVT*QSACSG
Trigger: TCCTGAACATGCTGACTGCCAGGTTACCTGGGAAAC...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCTCAAGGCACAGTTGCTaGATCTCTTCACCAAAATTT +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVASRHSC*ISSPKF
Trigger: AAATTTTGGTGAAGAGATCCAGCAACTGTGCCTTGA...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp GAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCAGTGACCCTGTGCATTaGACTCCTGCCAAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: ELKPNKENPSSCFSLNWPSDPVH*TPAKEA
Trigger: AGCTTCCTTGGCAGGAGTCCAATGCACAGGGTCACT...GGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCTTTCTTCTTAAACTCTaGGAGAACTCTCAAGGACAG +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAFLLKL*ENSQGQ
Trigger: CTGTCCTTGAGAGTTCTCCCAGAGTTTAAGAAGAAA...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGAGGGAGGAGCAAAGATaGCCGAATAGGAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPREEQR*PNRNSS
Trigger: GGAGCTGTTCCTATTCGGCCATCTTTGCTCCTCCCT...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380249.5
CDS-3UTR TCA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTCAGTGTCTTCAGAATaGGAGGTCTTGTGTCACAAC +
Preference number: 4 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGSVSSE*EVLCHN
Trigger: GTTGTGACACAAGACCTCTCATTCTGAAGACACTGA...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCCATATTCAGTTGTATTaGCCGTTAAGGAAGGAACTA +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAHIQLY*PLRKEL
Trigger: TAGTTCCTTCCTTAACGGTCAATACAACTGAATATG...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTAATGGCTATCCACAATaGCCAAGAGTGTATCAAGTA +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLNGYPQ*PRVYQV
Trigger: TACTTGATACACTCTTGGTCATTGTGGATAGCCATT...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGTGGATTTGCACGGCTTaGGACTCATCAGCACTTGGT +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPWICTA*DSSALG
Trigger: ACCAAGTGCTGATGAGTCTCAAGCCGTGCAAATCCA...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGCTGTTAGAACAATTCTaGTCCAGGCAGGGAGTAGTT +
Preference number: 4 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGLLEQF*SRQGVV
Trigger: AACTACTCCCTGCCTGGATCAGAATTGTTCTAACAG...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGGGTCTGGATGGCTTCTaGTTTCAGCTGCATTACATC +
Preference number: 4 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMGLDGF*FQLHYI
Trigger: GATGTAATGCAGCTGAAATCAGAAGCCATCCAGACC...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGGTGTCAAGCTGTCAGTaGTGTGGCCATCTTTTCATG +
Preference number: 4 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMVSSCQ*CGHLFM
Trigger: CATGAAAAGATGGCCACATCACTGACAGCTTGACAC...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGAAAAACGCTGTCAGCTaGTGCAAAAACACTGGCCAG +
Preference number: 4 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMKNAVS*CKNTGQ
Trigger: CTGGCCAGTGTTTTTGCAGCAGCTGACAGCGTTTTT...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR GCA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGAGAGCAAGTGAAGTCTaGTTGAAACTTCGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMRASEV*LKLRPL
Trigger: CAGAGGGCGAAGTTTCAAGCAGACTTCACTTGCTCT...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGAGCTCGATTCATGTATaGAAGCCAGGCCTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPSSIHV*KPGLWK
Trigger: CTTCCACAGGCCTGGCTTGCATACATGAATCGAGCT...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGACTCTCCTTTGCAGCTaGCTTGGTGATCTCATCAGT +
Preference number: 4 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMTLLCS*LGDLIS
Trigger: ACTGATGAGATCACCAAGGCAGCTGCAAAGGAGAGT...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp GAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGAGCTAACAGCGCATTaGCTTTCACTACCGGACTCT +
Preference number: 4 (lower is better)
Translates to: ELKPNKENPSSCFSLNWPELTAH*LSLPDS
Trigger: AGAGTCCGGTAGTGAAAGGCAATGCGCTGTTAGCTC...GGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATACTTCCGGAGCAATGCTaGTACGTGAACGCGGGACTG +
Preference number: 4 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLILPEQC*YVNAGL
Trigger: CAGTCCCGCGTTCACGTAGCAGCATTGCTCCGGAAG...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCAGGGAGTAGTTTGCTaGCCAAGTCTTCAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMQGVVC*PSLQLF
Trigger: GAAAAGCTGAAGACTTGGGCAGCAAACTACTCCCTG...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGAGGCAGGGAGTAGTTTaGTGCCCAAGTCTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPRQGVV*CPSLQL
Trigger: AAGCTGAAGACTTGGGCAGCAAACTACTCCCTGCCT...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCTTTTATCCACAGAGGTaGAGATATCAGGAGATATCT +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAFYPQR*RYQEIS
Trigger: AGATATCTCCTGATATCTGCACCTCTGTGGATAAAA...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGCCTGGTATAAGCTGTaGAGAATCATCCAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPAWYKL*RIIQAN
Trigger: GTTGGCCTGGATGATTCTGCACAGCTTATACCAGGC...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGTGTGCATTGGACTCCTaGCAAGGAAGCTTGGTACTG +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPCALDS*QGSLVL
Trigger: CAGTACCAAGCTTCCTTGGCAGGAGTCCAATGCACA...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGTTCCATGGCTCTTTCTaGAGCAGCAGAGCCATGCTA +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPFHGSF*SSRAML
Trigger: TAGCATGGCTCTGCTGCTGCAGAAAGAGCCATGGAA...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGCGGGTACTAAAGCAATaGACTCCTCTCTTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPRVLKQ*TPLLGG
Trigger: GCCTCCTAAGAGAGGAGTGCATTGCTTTAGTACCCG...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTTCAGGGCACTGCTaGAAAAACGCTGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPLSGHC*KNAVSC
Trigger: GCAGCTGACAGCGTTTTTCCAGCAGTGCCCTGAAAG...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGATCAGATTTGGCACCTaGGAGGAATCTGCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPIRFGT*EESAWA
Trigger: AGCCCAAGCAGATTCCTCCCAGGTGCCAAATCTGAT...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CCA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCAGCATTTGCTACAATTaGGTCCTTGTTTTGAGTATG +
Preference number: 4 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVASICYN*VLVLSM
Trigger: CATACTCAAAACAAGGACCCAATTGTAGCAAATGCT...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTAGGAATGGGAATTTCTaGTCTTATCTTTTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLRNGNF*SYLFRQ
Trigger: CTGCCTGAAAAGATAAGACCAGAAATTCCCATTCCT...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGAACTTCGCCCTCTGCTaGCCATCAGTCTGTTCAATG +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPNFALC*PSVCSM
Trigger: CATTGAACAGACTGATGGCCAGCAGAGGGCGAAGTT...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTGTCTTCCCTGTAAAATaGCATGATAAGCTCGATTCA +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLVFPVK*HDKLDS
Trigger: TGAATCGAGCTTATCATGCCATTTTACAGGGAAGAC...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTGTGTATCAAGTACCATaGAAACCCACTCTTTCATTG +
Preference number: 4 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLVYQVP*KPTLSL
Trigger: CAATGAAAGAGTGGGTTTCCATGGTACTTGATACAC...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGTTTCCCAGGTAACCTaGCAGTCAGCATGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPVSQVT*QSACSG
Trigger: TCCTGAACATGCTGACTGCCAGGTTACCTGGGAAAC...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCACGCGGGACTGCATTTaGCTGCTGTGGCTCATGAGG +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVTRDCI*LLWLMR
Trigger: CCTCATGAGCCACAGCAGCCAAATGCAGTCCCGCGT...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCAACTGTGGATCAGTGGTaGTGTCACCCACAAGCCCAA +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPTVDQW*CHPQAQ
Trigger: TTGGGCTTGTGGGTGACACCACCACTGATCCACAGT...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGTCAAAACGCCCGTATTaGCATGGCTCACAATCCGTG +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPSKRPY*HGSQSV
Trigger: CACGGATTGTGAGCCATGCCAATACGGGCGTTTTGA...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCAGGAGAGGGGCAGTGTaGTCAGCCCATGCAACCACT +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVRRGAV*SAHATT
Trigger: AGTGGTTGCATGGGCTGACCACACTGCCCCTCTCCT...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGATTCTCCTGATGCCATaGCAACCAACTGGCACTGAG +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPILLMP*QPTGTE
Trigger: CTCAGTGCCAGTTGGTTGCCATGGCATCAGGAGAAT...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCAGTCAATGAACTTCTaGGTCTGTTCCTTCCATGGC +
Preference number: 4 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMQSMNF*VCSFHG
Trigger: GCCATGGAAGGAACAGACCCAGAAGTTCATTGACTG...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGCTGCTGTTCCAGTATTaGTGGTTGATCTTTGTCACA +
Preference number: 4 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGLLFQY*WLIFVT
Trigger: TGTGACAAAGATCAACCATCAATACTGGAACAGCAG...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR TCA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGATATCTGCACCATGTTaGTATGGCCTCTGCTTACAT +
Preference number: 4 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGISAPC*YGLCLH
Trigger: ATGTAAGCAGAGGCCATATCAACATGGTGCAGATAT...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGTCAGTGTCTTCAGAATaGGAGGTCTTGTGTCACAAC +
Preference number: 4 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMSVSSE*EVLCHN
Trigger: GTTGTGACACAAGACCTCTCATTCTGAAGACACTGA...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGCAAAGGGGGAGTGAGTaGCAACAGTTTGAGATAGCA +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPQRGSE*QQFEIA
Trigger: TGCTATCTCAAACTGTTGTCACTCACTCCCCCTTTG...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCAGCAATGCTGCTACGTaGACGCGGGACTGCATTTGG +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVSNAAT*TRDCIW
Trigger: CCAAATGCAGTCCCGCGTTCACGTAGCAGCATTGCT...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATAAAGGCCACCATGCCATaGAGAGCTGCCAGACAAAGC +
Preference number: 4 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLIKATMP*RAARQS
Trigger: GCTTTGTCTGGCAGCTCTTCATGGCATGGTGGCCTT...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGGATAGAGTAGATAGATaGAGATGTCCAAGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGDRVDR*RCPRSQ
Trigger: CTGGCTTCTTGGACATCTTCATCTATCTACTCTATC...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGGGCATTTTGCTATGCTaGTATACAGCTCTAGATCCT +
Preference number: 4 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGGILLC*YTALDP
Trigger: AGGATCTAGAGCTGTATATCAGCATAGCAAAATGCC...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGAAGGGGAATCGTCCTTaGGAGACTAAGTACAGTTTG +
Preference number: 4 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMKGNRP*ETKYSL
Trigger: CAAACTGTACTTAGTCTCTCAAGGACGATTCCCCTT...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGAGCTGCCAACATATCTaGACCATGTTGATATGGCCT +
Preference number: 4 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMSCQHI*TMLIWP
Trigger: AGGCCATATCAACATGGTGCAGATATGTTGGCAGCT...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp CTCAGTGTCTTCAGAATGAGAGGTCTTGTGTCACAACTCAGCTTTGGAGAGAGACACTTGAGAAATAGCTaGCAACATATCTGCACCATG +
Preference number: 4 (lower is better)
Translates to: LSVFRMRGLVSQLSFGERHLRNS*QHICTM
Trigger: CATGGTGCAGATATGTTGGCAGCTATTTCTCAAGTG...TCTCTCTCCAAAGCTGAGTTGTGACACAAGACCTCTCATTCTGAAGACACTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603648.1
CDS-3UTR GCA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGGGCCAGGGATCTATATaGAGCATTTGCTACAATTGG +
Preference number: 4 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMGQGSI*SICYNW
Trigger: CCAATTGTAGCAAATGCTGCATATAGATCCCTGGCC...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGAAAATTGGGGATTCCTaGTACAGTCTTTCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGKIGDS*YSLSLV
Trigger: GACCAAGGAAAGACTGTAGCAGGAATCCCCAATTTT...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp GAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCAGAGCAAGTGAAGTCTaGTTGAAACTTCGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: ELKPNKENPSSCFSLNWPRASEV*LKLRPL
Trigger: CAGAGGGCGAAGTTTCAAGCAGACTTCACTTGCTCT...GGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp GAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCACTCTCCTTTGCAGCTaGCTTGGTGATCTCATCAGT +
Preference number: 4 (lower is better)
Translates to: ELKPNKENPSSCFSLNWPTLLCS*LGDLIS
Trigger: ACTGATGAGATCACCAAGGCAGCTGCAAAGGAGAGT...GGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCATCTTTCTCACGGTGCTaGACAGCAACGCTCAGCATA +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPSFSRC*TATLSI
Trigger: TATGCTGAGCGTTGCTGTGCAGCACCGTGAGAAAGA...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCATGTGCATTGGACTCCTaGCAAGGAAGCTTGGTACTG +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPCALDS*QGSLVL
Trigger: CAGTACCAAGCTTCCTTGGCAGGAGTCCAATGCACA...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACGGGTACTAAAGCAATaGACTCCTCTCTTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPRVLKQ*TPLLGG
Trigger: GCCTCCTAAGAGAGGAGTGCATTGCTTTAGTACCCG...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp GAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCAACTGGAATCAGATTTaGCACCTGGGAGGAATCTGC +
Preference number: 4 (lower is better)
Translates to: ELKPNKENPSSCFSLNWPNWNQI*HLGGIC
Trigger: GCAGATTCCTCCCAGGTGCCAAATCTGATTCCAGTT...GGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CCA 90 bp GAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCATCAGTTTCTCCCATTaGACTTCCTTGCCCACCGAA +
Preference number: 4 (lower is better)
Translates to: ELKPNKENPSSCFSLNWPISFSH*TSLPTE
Trigger: TTCGGTGGGCAAGGAAGTCCAATGGGAGAAACTGAT...GGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGGCCAGGTTTCAGTCCTaGTTGCTTGTTTGTTTCATA +
Preference number: 4 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGARFQS*LLVCFI
Trigger: TATGAAACAAACAAGCAACCAGGACTGAAACCTGGC...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCATGCAAGCCAGGCCTGTaGAAGAAAAATTGCACGGTG +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPCKPGL*KKNCTV
Trigger: CACCGTGCAATTTTTCTTCCACAGGCCTGGCTTGCA...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp GAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCAGAGAAGTTGCCCTCTaGGTTGGTAATGGCTATCCA +
Preference number: 4 (lower is better)
Translates to: ELKPNKENPSSCFSLNWPREVAL*VGNGYP
Trigger: TGGATAGCCATTACCAACCCAGAGGGCAACTTCTCT...GGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCATGCATTTGGCTGCTGTaGCTCATGAGGGACAGAACA +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPCIWLL*LMRDRT
Trigger: TGTTCTGTCCCTCATGAGCCACAGCAGCCAAATGCA...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCACGCGGGACTGCATTTaGCTGCTGTGGCTCATGAGG +
Preference number: 4 (lower is better)
Translates to: ENLHIELKPNKENPSSCFTRDCI*LLWLMR
Trigger: CCTCATGAGCCACAGCAGCCAAATGCAGTCCCGCGT...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCAGTGCAGCTGCATTCTaGGATGACTGTGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVSAAAF*DDCAWV
Trigger: GACCCAGGCACAGTCATCCCAGAATGCAGCTGCACT...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGCCTGGGCGATCCGATTaGCATCATCATCTGTCATTT +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPPGRSD*HHHLSF
Trigger: AAATGACAGATGATGATGCCAATCGGATCGCCCAGG...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp GAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCCCTGGGCGATCCGATTaGCATCATCATCTGTCATTT +
Preference number: 4 (lower is better)
Translates to: ELKPNKENPSSCFSLNWPPGRSD*HHHLSF
Trigger: AAATGACAGATGATGATGCCAATCGGATCGCCCAGG...GGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCATCAAAACGCCCGTATTaGCATGGCTCACAATCCGTG +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPSKRPY*HGSQSV
Trigger: CACGGATTGTGAGCCATGCCAATACGGGCGTTTTGA...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAAAGGAGAGGGGCAGTGTaGTCAGCCCATGCAACCACT +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIERRGAV*SAHATT
Trigger: AGTGGTTGCATGGGCTGACCACACTGCCCCTCTCCT...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGCTTTCAAAAGATCCCTaGACTGTGCTGAGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPLSKDP*TVLRGL
Trigger: AAGCCCTCTCAGCACAGTCCAGGGATCTTTTGAAAG...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGACCAACCATATGCTCTaGTCCATACAGCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGTNHML*SIQLSS
Trigger: AGAAGAAAGCTGTATGGACCAGAGCATATGGTTGGT...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGAAGCTGTCAGTGATGTaGCCATCTTTTCATGACCCT +
Preference number: 4 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMKLSVM*PSFHDP
Trigger: AGGGTCATGAAAAGATGGCCACATCACTGACAGCTT...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGATGTCACAACACAGTTaGAGTATCTGCTGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMMSQHS*SICCSS
Trigger: ACTGGAACAGCAGATACTTCAACTGTGTTGTGACAT...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR TCA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCTCATCTGGGTAAGCTaGATTTTCCAGAAAACAGGA +
Preference number: 4 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMLIWVS*IFQKTG
Trigger: TCCTGTTTTCTGGAAAATTCAGCTTACCCAGATGAG...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR TCA 90 bp GAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGACTTTGGGATTTTCTaGTCCTCAGTAACAGAGAGG +
Preference number: 4 (lower is better)
Translates to: ELKPNKENPSSCFSLNWPDFGIF*SSVTER
Trigger: CCTCTCTGTTACTGAGGATCAGAAAATCCCAAAGTC...GGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR TCA 90 bp AAGTATCTTCTAAGCCTGTCTCAGTCAGATGATCTCATATTCAGTTGTATTGACGCTGCTGGAGTAGCTTaGTCAGGCTTGGTGCATTCA +
Preference number: 4 (lower is better)
Translates to: KYLLSLSQSDDLIFSCIDAAGVA*SGLVHS
Trigger: TGAATGCACCAAGCCTGATCAAGCTACTCCAGCAGC...GTCAATACAACTGAATATGAGATCATCTGACTGAGACAGGCTTAGAAGATACTT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603648.1
CDS-3UTR TCA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCCTTTTAATGCAGAGTaGTATATCCCACGAGGCATA +
Preference number: 4 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMPFNAE*YIPRGI
Trigger: TATGCCTCGTGGGATATATCACTCTGCATTAAAAGG...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAAGGCTGCTGTGGCTCATaGGGGACAGAACAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIEGCCGS*GTEQVQ
Trigger: TTGGACTTGTTCTGTCCCTCATGAGCCACAGCAGCC...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAAAGCAATGCTGCTACGTaGACGCGGGACTGCATTTGG +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIESNAAT*TRDCIW
Trigger: CCAAATGCAGTCCCGCGTTCACGTAGCAGCATTGCT...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCATCCAGCACTGAACGCTaGTGTACATACACAGCTAAG +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPSSTER*CTYTAK
Trigger: CTTAGCTGTGTATGTACATCAGCGTTCAGTGCTGGA...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCAAGCCAGACTGCATTTaGCTGGAGACCAATCACCCC +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVKPDCI*LETNHP
Trigger: GGGGTGATTGGTCTCCAGTCAAATGCAGTCTGGCTT...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCATCCCTGGACTGTGCTaGGAGGGCTTCTTTAGGGCT +
Preference number: 4 (lower is better)
Translates to: ENLHIELKPNKENPSSCFIPGLC*EGFFRA
Trigger: AGCCCTAAAGAAGCCCTCTCAGCACAGTCCAGGGAT...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp GAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCAGCTGCCAACATATCTaGACCATGTTGATATGGCCT +
Preference number: 4 (lower is better)
Translates to: ELKPNKENPSSCFSLNWPSCQHI*TMLIWP
Trigger: AGGCCATATCAACATGGTGCAGATATGTTGGCAGCT...GGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTACCGGACTCTCCTTTaGAGCTGCCTTGGTGATCTC +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVYRTLL*SCLGDL
Trigger: GAGATCACCAAGGCAGCTGCAAAGGAGAGTCCGGTA...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCCGACGACAGCAAGGCTaGTTAGAGCTAACAGCGCAT +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVRRQQG*LELTAH
Trigger: ATGCGCTGTTAGCTCTAAGCAGCCTTGCTGTCGTCG...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCCCTCCTGAAACGTTCTaGTCTGGCTCCCGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: ENLHIELKPNKENPSSCFPPETF*SGSRCH
Trigger: ATGACAGCGGGAGCCAGAGCAGAACGTTTCAGGAGG...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGATTTCAAGGCACAGTTaGTGGATCTCTTCACCAAAA +
Preference number: 4 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGISRHS*WISSPK
Trigger: TTTTGGTGAAGAGATCCAGCAACTGTGCCTTGAAAT...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCACCTCTTTCTCACGGTaGTGCACAGCAACGCTCAGC +
Preference number: 4 (lower is better)
Translates to: ENLHIELKPNKENPSSCFTSFSR*CTATLS
Trigger: GCTGAGCGTTGCTGTGCAGCACCGTGAGAAAGAGGT...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCAGTGTGGTCAGCCCATaGAACCACTGCGGTTGCAAA +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVSVVSP*NHCGCK
Trigger: TTTGCAACCGCAGTGGTTGCATGGGCTGACCACACT...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp GAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCCAGCAGAGAGGACTTTaGGATTTTCTGATCCTCAGT +
Preference number: 4 (lower is better)
Translates to: ELKPNKENPSSCFSLNWPQQRGL*DFLILS
Trigger: ACTGAGGATCAGAAAATCCCAAAGTCCTCTCTGCTG...GGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCATGGGAGGAATCTGCTTaGGCTAATTCTGTAGTGACC +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPWEESA*ANSVVT
Trigger: GGTCACTACAGAATTAGCCCAAGCAGATTCCTCCCA...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCGCTACAGTCTTTCCTTaGTCTGAGCGGGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: ENLHIELKPNKENPSSCFATVFP*SERAPP
Trigger: AGGAGGTGCCCGCTCAGACCAAGGAAAGACTGTAGC...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGGTCTTCCCTGTAAAATaGCATGATAAGCTCGATTCA +
Preference number: 4 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGVFPVK*HDKLDS
Trigger: TGAATCGAGCTTATCATGCCATTTTACAGGGAAGAC...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGAGAAGGTTCATCTCTTaGCCAGATATATCACTGAGT +
Preference number: 4 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGRRFIS*PDISLS
Trigger: ACTCAGTGATATATCTGGCCAAGAGATGAACCTTCT...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGAAACCTGAAGTCTGCTaGCTATTCTCCACTAACAGT +
Preference number: 4 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMKPEVC*LFSTNS
Trigger: ACTGTTAGTGGAGAATAGCCAGCAGACTTCAGGTTT...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGAATGAGAGGTCTGGATaGCTTCTGATTTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPNERSG*LLISAA
Trigger: TGCAGCTGAAATCAGAAGCCATCCAGACCTCTCATT...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAAAGTGCAGCTGCATTCTaGGATGACTGTGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIESAAAF*DDCAWV
Trigger: GACCCAGGCACAGTCATCCCAGAATGCAGCTGCACT...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCGGCAGTTTCATGGCCTaGCTCAGACCGTGTAAAGCA +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVGSFMA*LRPCKA
Trigger: TGCTTTACACGGTCTGAGCCAGGCCATGAAACTGCC...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCATTGCTCTTAGTAACCTaGGCGATCCGATTGGCATCA +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPLLLVT*AIRLAS
Trigger: TGATGCCAATCGGATCGCCCAGGTTACTAAGAGCAA...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCGGTCTGTTCCTTCCATaGCTCTTTCTGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVGLFLP*LFLQQQ
Trigger: CTGCTGCTGCAGAAAGAGCCATGGAAGGAACAGACC...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACAGTCAATGAACTTCTaGGTCTGTTCCTTCCATGGC +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPQSMNF*VCSFHG
Trigger: GCCATGGAAGGAACAGACCCAGAAGTTCATTGACTG...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAATTCATCTCACTGGCTTaGAGAGTCCTACGCCCACGG +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIEFISLA*RVLRPR
Trigger: CCGTGGGCGTAGGACTCTCCAAGCCAGTGAGATGAA...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380249.5
CDS-3UTR TCA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGCTGTGCTCTAAAAGGTaGATTGAAGATGAACATTCA +
Preference number: 4 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGLCSKR*IEDEHS
Trigger: TGAATGTTCATCTTCAATTCACCTTTTAGAGCACAG...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR TCA 90 bp GAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCCCTATACACACCTTGTaGACACCAAGCTTAGGTAAA +
Preference number: 4 (lower is better)
Translates to: ELKPNKENPSSCFSLNWPPIHTL*TPSLGK
Trigger: TTTACCTAAGCTTGGTGTTCACAAGGTGTGTATAGG...GGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR TCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCTCAGCAAGCGCAAAGTaGCAGCTCTTAGTCGTGGTG +
Preference number: 4 (lower is better)
Translates to: ENLHIELKPNKENPSSCFSASAK*QLLVVV
Trigger: CACCACGACTAAGAGCTGTCACTTTGCGCTTGCTGA...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGATATCTGCACCATGTTaGTATGGCCTCTGCTTACAT +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPISAPC*YGLCLH
Trigger: ATGTAAGCAGAGGCCATATCAACATGGTGCAGATAT...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCATCAGTGTCTTCAGAATaGGAGGTCTTGTGTCACAAC +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPSVSSE*EVLCHN
Trigger: GTTGTGACACAAGACCTCTCATTCTGAAGACACTGA...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGATCTTTTCAGGCAGATaGAGAATGGTGTGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPIFSGR*RMVCSP
Trigger: AGGAGAACACACCATTCTTCATCTGCCTGAAAAGAT...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp GAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCCCTTTTAATGCAGAGTaGTATATCCCACGAGGCATA +
Preference number: 4 (lower is better)
Translates to: ELKPNKENPSSCFSLNWPPFNAE*YIPRGI
Trigger: TATGCCTCGTGGGATATATCACTCTGCATTAAAAGG...GGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAACAAGTGAAGTCTGCTTaGAACTTCGCCCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIEQVKSA*NFALCW
Trigger: CCAGCAGAGGGCGAAGTTTCAAGCAGACTTCACTTG...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGATGTACAAGAGCAAGTaGAGTCTGCTTGAAACTTCG +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPMYKSK*SLLETS
Trigger: CGAAGTTTCAAGCAGACTTCACTTGCTCTTGTACAT...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp GAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCTCTGAAAGCTGGATATaGACCTCATGTACAAGAGCA +
Preference number: 4 (lower is better)
Translates to: ELKPNKENPSSCFSLNWPSESWI*TSCTRA
Trigger: TGCTCTTGTACATGAGGTTCATATCCAGCTTTCAGA...GGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAAAGCCAGGGCAAAACCTaGAGTCTGCTGGCTATTCTC +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIESQGKT*SLLAIL
Trigger: GAGAATAGCCAGCAGACTTCAGGTTTTGCCCTGGCT...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAAAAGCCAGACTGCATTTaGCTGGAGACCAATCACCCC +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIEKPDCI*LETNHP
Trigger: GGGGTGATTGGTCTCCAGTCAAATGCAGTCTGGCTT...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGATAGAGTAGATAGATaGAGATGTCCAAGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPDRVDR*RCPRSQ
Trigger: CTGGCTTCTTGGACATCTTCATCTATCTACTCTATC...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGCATTTTGCTATGCTaGTATACAGCTCTAGATCCT +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPGILLC*YTALDP
Trigger: AGGATCTAGAGCTGTATATCAGCATAGCAAAATGCC...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCAAAGGGGAATCGTCCTTaGGAGACTAAGTACAGTTTG +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPKGNRP*ETKYSL
Trigger: CAAACTGTACTTAGTCTCTCAAGGACGATTCCCCTT...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATAAGGTTTAGAGCCAACTaGTGCCTAGAGGGACCTTCT +
Preference number: 4 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLIRFRAN*CLEGPS
Trigger: AGAAGGTCCCTCTAGGCAGCAGTTGGCTCTAAACCT...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR GCA 90 bp GAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCCTTGATCAGGCTTGGTaGATTCATTCAACACTTGAG +
Preference number: 4 (lower is better)
Translates to: ELKPNKENPSSCFSLNWPLDQAW*IHSTLE
Trigger: CTCAAGTGTTGAATGAATGCACCAAGCCTGATCAAG...GGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCAGGCCAGGGATCTATATaGAGCATTTGCTACAATTGG +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPGQGSI*SICYNW
Trigger: CCAATTGTAGCAAATGCTGCATATAGATCCCTGGCC...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCAGCTCGATTCATGTATaGAAGCCAGGCCTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVSSIHV*KPGLWK
Trigger: CTTCCACAGGCCTGGCTTGCATACATGAATCGAGCT...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATAAGCTCGATTCATGTATaGAAGCCAGGCCTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLISSIHV*KPGLWK
Trigger: CTTCCACAGGCCTGGCTTGCATACATGAATCGAGCT...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCTACCGGACTCTCCTTTaGAGCTGCCTTGGTGATCTC +
Preference number: 4 (lower is better)
Translates to: ENLHIELKPNKENPSSCFYRTLL*SCLGDL
Trigger: GAGATCACCAAGGCAGCTGCAAAGGAGAGTCCGGTA...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATAGAGCTAACAGCGCATTaGCTTTCACTACCGGACTCT +
Preference number: 4 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLIELTAH*LSLPDS
Trigger: AGAGTCCGGTAGTGAAAGGCAATGCGCTGTTAGCTC...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAACGACGACAGCAAGGCTaGTTAGAGCTAACAGCGCAT +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIERRQQG*LELTAH
Trigger: ATGCGCTGTTAGCTCTAAGCAGCCTTGCTGTCGTCG...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCAGGCAGGGAGTAGTTTaGTGCCCAAGTCTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVRQGVV*CPSLQL
Trigger: AAGCTGAAGACTTGGGCAGCAAACTACTCCCTGCCT...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGCTTTCTCCAACAGTTaGTATGGGTTTCATCACTAC +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPAFSNS*YGFHHY
Trigger: GTAGTGATGAAACCCATAGCAACTGTTGGAGAAAGC...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp GAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGCTTTCTCCAACAGTTaGTATGGGTTTCATCACTAC +
Preference number: 4 (lower is better)
Translates to: ELKPNKENPSSCFSLNWPAFSNS*YGFHHY
Trigger: GTAGTGATGAAACCCATAGCAACTGTTGGAGAAAGC...GGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATATCTTTCTCACGGTGCTaGACAGCAACGCTCAGCATA +
Preference number: 4 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLISFSRC*TATLSI
Trigger: TATGCTGAGCGTTGCTGTGCAGCACCGTGAGAAAGA...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTGTGGTCAGCCCATaGAACCACTGCGGTTGCAAA +
Preference number: 4 (lower is better)
Translates to: ENLHIELKPNKENPSSCFSVVSP*NHCGCK
Trigger: TTTGCAACCGCAGTGGTTGCATGGGCTGACCACACT...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTGTGCATTGGACTCCTaGCAAGGAAGCTTGGTACTG +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVCALDS*QGSLVL
Trigger: CAGTACCAAGCTTCCTTGGCAGGAGTCCAATGCACA...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTTCCATGGCTCTTTCTaGAGCAGCAGAGCCATGCTA +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVFHGSF*SSRAML
Trigger: TAGCATGGCTCTGCTGCTGCAGAAAGAGCCATGGAA...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATACTGCTGCAAAAACACTaGCCAGCAATCAGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLILLQKH*PAIRSV
Trigger: CACAGACCTGATTGCTGGCCAGTGTTTTTGCAGCAG...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CCA 90 bp GAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCTTGTACCATACATACTaGTTACAGGGCACACAAGCT +
Preference number: 4 (lower is better)
Translates to: ELKPNKENPSSCFSLNWPLYHTY*LQGTQA
Trigger: AGCTTGTGTGCCCTGTAACCAGTATGTATGGTACAA...GGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCAACTTCGCCCTCTGCTaGCCATCAGTCTGTTCAATG +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVNFALC*PSVCSM
Trigger: CATTGAACAGACTGATGGCCAGCAGAGGGCGAAGTT...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGGTGTATCAAGTACCATaGAAACCCACTCTTTCATTG +
Preference number: 4 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMVYQVP*KPTLSL
Trigger: CAATGAAAGAGTGGGTTTCCATGGTACTTGATACAC...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATATGCATTTGGCTGCTGTaGCTCATGAGGGACAGAACA +
Preference number: 4 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLICIWLL*LMRDRT
Trigger: TGTTCTGTCCCTCATGAGCCACAGCAGCCAAATGCA...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCAAATGAGAGGTCTGGATaGCTTCTGATTTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPNERSG*LLISAA
Trigger: TGCAGCTGAAATCAGAAGCCATCCAGACCTCTCATT...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATACAGACTGCATTTGACTaGAGACCAATCACCCCAGAG +
Preference number: 4 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLIQTAFD*RPITPE
Trigger: CTCTGGGGTGATTGGTCTCCAGTCAAATGCAGTCTG...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCACTGTGGATCAGTGGTaGTGTCACCCACAAGCCCAA +
Preference number: 4 (lower is better)
Translates to: ENLHIELKPNKENPSSCFTVDQW*CHPQAQ
Trigger: TTGGGCTTGTGGGTGACACCACCACTGATCCACAGT...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATAATTCTCCTGATGCCATaGCAACCAACTGGCACTGAG +
Preference number: 4 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLIILLMP*QPTGTE
Trigger: CTCAGTGCCAGTTGGTTGCCATGGCATCAGGAGAAT...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAAGGTCTGTTCCTTCCATaGCTCTTTCTGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIEGLFLP*LFLQQQ
Trigger: CTGCTGCTGCAGAAAGAGCCATGGAAGGAACAGACC...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGACCAACCATATGCTCTaGTCCATACAGCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPTNHML*SIQLSS
Trigger: AGAAGAAAGCTGTATGGACCAGAGCATATGGTTGGT...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCAAAGCTGTCAGTGATGTaGCCATCTTTTCATGACCCT +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPKLSVM*PSFHDP
Trigger: AGGGTCATGAAAAGATGGCCACATCACTGACAGCTT...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTGCTGTTCCAGTATTaGTGGTTGATCTTTGTCACA +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPLLFQY*WLIFVT
Trigger: TGTGACAAAGATCAACCATCAATACTGGAACAGCAG...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR TCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCAAGATTGGCTTCTGCTaGCTTGCTGGAGTCTGTAGA +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVKIGFC*LAGVCR
Trigger: TCTACAGACTCCAGCAAGTCAGCAGAAGCCAATCTT...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR TCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCAATATCTGCACCATGTTaGTATGGCCTCTGCTTACAT +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPISAPC*YGLCLH
Trigger: ATGTAAGCAGAGGCCATATCAACATGGTGCAGATAT...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCATATTCAGTTGTATTaGCCGTTAAGGAAGGAACTA +
Preference number: 4 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMHIQLY*PLRKEL
Trigger: TAGTTCCTTCCTTAACGGTCAATACAACTGAATATG...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCATCTGAAAGCTGGATATaGACCTCATGTACAAGAGCA +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPSESWI*TSCTRA
Trigger: TGCTCTTGTACATGAGGTTCATATCCAGCTTTCAGA...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCTTGCAGCTGCCTTGGTaGTCTCATCAGTCAGCATGT +
Preference number: 4 (lower is better)
Translates to: ENLHIELKPNKENPSSCFLQLPW*SHQSAC
Trigger: ACATGCTGACTGATGAGATCACCAAGGCAGCTGCAA...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGAACCCACTCTTTCATTaGAAGGAAATTAGGTTGAAC +
Preference number: 4 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMNPLFH*KEIRLN
Trigger: GTTCAACCTAATTTCCTTTCAATGAAAGAGTGGGTT...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAATGGATTTGCACGGCTTaGGACTCATCAGCACTTGGT +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIEWICTA*DSSALG
Trigger: ACCAAGTGCTGATGAGTCTCAAGCCGTGCAAATCCA...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATATCCAGCACTGAACGCTaGTGTACATACACAGCTAAG +
Preference number: 4 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLISSTER*CTYTAK
Trigger: CTTAGCTGTGTATGTACATCAGCGTTCAGTGCTGGA...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACACACAGACAATCCATaGACTATGTTTCCTAAAGCC +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPHTDNP*TMFPKA
Trigger: GGCTTTAGGAAACATAGTTCATGGATTGTCTGTGTG...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCGGTCTGGATGGCTTCTaGTTTCAGCTGCATTACATC +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVGLDGF*FQLHYI
Trigger: GATGTAATGCAGCTGAAATCAGAAGCCATCCAGACC...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGATTGTGAAAGGATGTTaGCTGGTAAGCAACATTTCT +
Preference number: 4 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMIVKGC*LVSNIS
Trigger: AGAAATGTTGCTTACCAGTCAACATCCTTTCACAAT...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATATTTTCCTCATCCAGCTaGGAATGCTGCTGGTTACTG +
Preference number: 4 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLIFSSSS*ECCWLL
Trigger: CAGTAACCAGCAGCATTCTCAGCTGGATGAGGAAAA...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCGTGTCAAGCTGTCAGTaGTGTGGCCATCTTTTCATG +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVVSSCQ*CGHLFM
Trigger: CATGAAAAGATGGCCACATCACTGACAGCTTGACAC...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAACGCTGTCAGCTGCTaGAAAAACACTGGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: ENLHIELKPNKENPSSCFNAVSC*KNTGQQ
Trigger: TTGCTGGCCAGTGTTTTTGCAGCAGCTGACAGCGTT...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR GCA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATATTTAGAGCCAACTGCTaGCTAGAGGGACCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLIFRANC*LEGPSS
Trigger: TGAAGAAGGTCCCTCTAGGCAGCAGTTGGCTCTAAA...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR GCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAAAGCCAACCAGTCACTTaGAGCAGACGAGTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIESQPVT*SRRVCH
Trigger: ATGACAGACTCGTCTGCTGCAAGTGACTGGTTGGCT...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR GCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGCCAACCAGTCACTTaGAGCAGACGAGTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: ENLHIELKPNKENPSSCFSQPVT*SRRVCH
Trigger: ATGACAGACTCGTCTGCTGCAAGTGACTGGTTGGCT...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR GCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAACCCATTGGACTTCCTTaGCCACCGAAAGAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIEPIGLP*PPKEKV
Trigger: TACCTTCTCTTTCGGTGGGCAAGGAAGTCCAATGGG...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp CAGATGATCTCATATTCAGTTGTATTGACCGTTAAGGAAGGAACTAGAGAAAATCCCATTGGACTTCCTTaGCCACCGAAAGAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: QMISYSVVLTVKEGTRENPIGLP*PPKEKV
Trigger: TACCTTCTCTTTCGGTGGGCAAGGAAGTCCAATGGG...ATTTTCTCTAGTTCCTTCCTTAACGGTCAATACAACTGAATATGAGATCATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603648.1
CDS-3UTR GCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTGATCAGGCTTGGTaGATTCATTCAACACTTGAG +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPLDQAW*IHSTLE
Trigger: CTCAAGTGTTGAATGAATGCACCAAGCCTGATCAAG...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATATCCAAGTGGAGCGAATaGAAACAACCTCAGCTTGAC +
Preference number: 4 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLISKWSE*KQPQLD
Trigger: GTCAAGCTGAGGTTGTTTGCATTCGCTCCACTTGGA...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCAAAAATTGGGGATTCCTaGTACAGTCTTTCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPKIGDS*YSLSLV
Trigger: GACCAAGGAAAGACTGTAGCAGGAATCCCCAATTTT...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATAACTCTCCTTTGCAGCTaGCTTGGTGATCTCATCAGT +
Preference number: 4 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLITLLCS*LGDLIS
Trigger: ACTGATGAGATCACCAAGGCAGCTGCAAAGGAGAGT...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAAGAGCTAACAGCGCATTaGCTTTCACTACCGGACTCT +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIEELTAH*LSLPDS
Trigger: AGAGTCCGGTAGTGAAAGGCAATGCGCTGTTAGCTC...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCTCTTTCTCACGGTGCTaGACAGCAACGCTCAGCATA +
Preference number: 4 (lower is better)
Translates to: ENLHIELKPNKENPSSCFSFSRC*TATLSI
Trigger: TATGCTGAGCGTTGCTGTGCAGCACCGTGAGAAAGA...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAATTCCATGGCTCTTTCTaGAGCAGCAGAGCCATGCTA +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIEFHGSF*SSRAML
Trigger: TAGCATGGCTCTGCTGCTGCAGAAAGAGCCATGGAA...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAACTGCTGCAAAAACACTaGCCAGCAATCAGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIELLQKH*PAIRSV
Trigger: CACAGACCTGATTGCTGGCCAGTGTTTTTGCAGCAG...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CCA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGTTTTACCTGCAAACATaGAACTATGTCACAACACAG +
Preference number: 4 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMFYLQT*NYVTTQ
Trigger: CTGTGTTGTGACATAGTTCCATGTTTGCAGGTAAAA...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCAACTGGAATCAGATTTaGCACCTGGGAGGAATCTGC +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVNWNQI*HLGGIC
Trigger: GCAGATTCCTCCCAGGTGCCAAATCTGATTCCAGTT...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CCA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGTTTGAACATCAAAACTaGAATCAGATTTGGCACCTG +
Preference number: 4 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMFEHQN*NQIWHL
Trigger: CAGGTGCCAAATCTGATTCCAGTTTTGATGTTCAAA...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CCA 90 bp AGTCAGATGATCTCATATTCAGTTGTATTGACCGTTAAGGAAGGAACTAGAGAAATCAGTTTCTCCCATTaGACTTCCTTGCCCACCGAA +
Preference number: 4 (lower is better)
Translates to: SQMISYSVVLTVKEGTREISFSH*TSLPTE
Trigger: TTCGGTGGGCAAGGAAGTCCAATGGGAGAAACTGAT...TTCTCTAGTTCCTTCCTTAACGGTCAATACAACTGAATATGAGATCATCTGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603648.1
CDS-3UTR CCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGAGAAGGTTCATCTCTTaGCCAGATATATCACTGAGT +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPRRFIS*PDISLS
Trigger: ACTCAGTGATATATCTGGCCAAGAGATGAACCTTCT...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCCAGACTGCATTTGACTaGAGACCAATCACCCCAGAG +
Preference number: 4 (lower is better)
Translates to: ENLHIELKPNKENPSSCFQTAFD*RPITPE
Trigger: CTCTGGGGTGATTGGTCTCCAGTCAAATGCAGTCTG...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp GAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCTCAAGGCACAGTTGCTaGATCTCTTCACCAAAATTT +
Preference number: 4 (lower is better)
Translates to: ELKPNKENPSSCFSLNWPSRHSC*ISSPKF
Trigger: AAATTTTGGTGAAGAGATCCAGCAACTGTGCCTTGA...GGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGTCAAGGCACAGTTGCTaGATCTCTTCACCAAAATTT +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPSRHSC*ISSPKF
Trigger: AAATTTTGGTGAAGAGATCCAGCAACTGTGCCTTGA...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTGGGATGACTGTGCCTaGGTCACCATAATTTCAAGG +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVWDDCA*VTIISR
Trigger: CCTTGAAATTATGGTGACCCAGGCACAGTCATCCCA...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCCTCACAATCCGTGCCTaGTATAAGCTGTGCAGAATC +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVLTIRA*YKLCRI
Trigger: GATTCTGCACAGCTTATACCAGGCACGGATTGTGAG...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCTCAAAACGCCCGTATTaGCATGGCTCACAATCCGTG +
Preference number: 4 (lower is better)
Translates to: ENLHIELKPNKENPSSCFSKRPY*HGSQSV
Trigger: CACGGATTGTGAGCCATGCCAATACGGGCGTTTTGA...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCCAGTCAATGAACTTCTaGGTCTGTTCCTTCCATGGC +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVQSMNF*VCSFHG
Trigger: GCCATGGAAGGAACAGACCCAGAAGTTCATTGACTG...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCATCCAGTATTGATGGTTaGTCTTTGTCACAAAGAACC +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPSSIDG*SLSQRT
Trigger: GGTTCTTTGTGACAAAGATCAACCATCAATACTGGA...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR TCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCAGTGGTCTTCCCAATTTaGACATCAAAACTGGAATCA +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPVVFPI*TSKLES
Trigger: TGATTCCAGTTTTGATGTTCAAATTGGGAAGACCAC...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR TCA 90 bp AGTCAGATGATCTCATATTCAGTTGTATTGACCGTTAAGGAAGGAACTAGAGAATCAGTGTCTTCAGAATaGGAGGTCTTGTGTCACAAC +
Preference number: 4 (lower is better)
Translates to: SQMISYSVVLTVKEGTRESVSSE*EVLCHN
Trigger: GTTGTGACACAAGACCTCTCATTCTGAAGACACTGA...TTCTCTAGTTCCTTCCTTAACGGTCAATACAACTGAATATGAGATCATCTGACT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603648.1
CDS-3UTR TCA 90 bp GAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCAACCCACTCTTTCATTaGAAGGAAATTAGGTTGAAC +
Preference number: 4 (lower is better)
Translates to: ELKPNKENPSSCFSLNWPNPLFH*KEIRLN
Trigger: GTTCAACCTAATTTCCTTTCAATGAAAGAGTGGGTT...GGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCAAATGGCTATCCACAATaGCCAAGAGTGTATCAAGTA +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPNGYPQ*PRVYQV
Trigger: TACTTGATACACTCTTGGTCATTGTGGATAGCCATT...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCTCCAGCACTGAACGCTaGTGTACATACACAGCTAAG +
Preference number: 4 (lower is better)
Translates to: ENLHIELKPNKENPSSCFSSTER*CTYTAK
Trigger: CTTAGCTGTGTATGTACATCAGCGTTCAGTGCTGGA...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCGGTCTGGATGGCTTCTaGTTTCAGCTGCATTACATC +
Preference number: 4 (lower is better)
Translates to: ENLHIELKPNKENPSSCFGLDGF*FQLHYI
Trigger: GATGTAATGCAGCTGAAATCAGAAGCCATCCAGACC...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCAGAGACACTAATGACCTaGGTTAAGGTTCTAATGACT +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPETLMT*VKVLMT
Trigger: AGTCATTAGAACCTTAACTCAGGTCATTAGTGTCTC...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGAGACTAAGTACAGTTTaGCAAAGGCAGCTTTTTCTA +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPRLSTV*QRQLFL
Trigger: TAGAAAAAGCTGCCTTTGTCAAACTGTACTTAGTCT...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCAAGGGGAATCGTCCTTaGGAGACTAAGTACAGTTTG +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVKGNRP*ETKYSL
Trigger: CAAACTGTACTTAGTCTCTCAAGGACGATTCCCCTT...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCCGATGGAGAAGACGGTaGTTTCTGCATTTCCATCTG +
Preference number: 4 (lower is better)
Translates to: ENLHIELKPNKENPSSCFRWRRR*FLHFHL
Trigger: CAGATGGAAATGCAGAAATCACCGTCTTCTCCATCG...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380249.5
CDS-3UTR GCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCAACATAGCTGAACTCTaGATGATCCTGAGCAACGAG +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVNIAEL*MILSNE
Trigger: CTCGTTGCTCAGGATCATGCAGAGTTCAGCTATGTT...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR GCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAAAAAAACGCTGTCAGCTaGTGCAAAAACACTGGCCAG +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIEKNAVS*CKNTGQ
Trigger: CTGGCCAGTGTTTTTGCAGCAGCTGACAGCGTTTTT...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
40% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR GCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAATTTAGAGCCAACTGCTaGCTAGAGGGACCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIEFRANC*LEGPSS
Trigger: TGAAGAAGGTCCCTCTAGGCAGCAGTTGGCTCTAAA...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR GCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAATCCAAGTGGAGCGAATaGAAACAACCTCAGCTTGAC +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIESKWSE*KQPQLD
Trigger: GTCAAGCTGAGGTTGTTTGCATTCGCTCCACTTGGA...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp CAGATGATCTCATATTCAGTTGTATTGACCGTTAAGGAAGGAACTAGAGAAAATTCCAAGTGGAGCGAATaGAAACAACCTCAGCTTGAC +
Preference number: 4 (lower is better)
Translates to: QMISYSVVLTVKEGTRENSKWSE*KQPQLD
Trigger: GTCAAGCTGAGGTTGTTTGCATTCGCTCCACTTGGA...ATTTTCTCTAGTTCCTTCCTTAACGGTCAATACAACTGAATATGAGATCATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603648.1
CDS-3UTR GCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAATGGTGTGTTCTCCTaGACTAAAGTTGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: ENLHIELKPNKENPSSCFNGVFS*TKVGQG
Trigger: TCCCTGGCCAACTTTAGTGCAGGAGAACACACCATT...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCCAGGGAGTAGTTTGCTaGCCAAGTCTTCAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: ENLHIELKPNKENPSSCFQGVVC*PSLQLF
Trigger: GAAAAGCTGAAGACTTGGGCAGCAAACTACTCCCTG...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp GAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCTTTTATCCACAGAGGTaGAGATATCAGGAGATATCT +
Preference number: 4 (lower is better)
Translates to: ELKPNKENPSSCFSLNWPFYPQR*RYQEIS
Trigger: AGATATCTCCTGATATCTGCACCTCTGTGGATAAAA...GGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATAAAGAATGGAGTTAGTTaGAGGGAGGAGCAAAGATGG +
Preference number: 4 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLIKNGVS*REEQRW
Trigger: CCATCTTTGCTCCTCCCTGCAACTAACTCCATTCTT...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380249.5
CDS-3UTR CCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACCCACAGCCTGTGATTaGATAAGAGAATTTGGAAAT +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPPTACD*IREFGN
Trigger: ATTTCCAAATTCTCTTATCCAATCACAGGCTGTGGG...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CCA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGCAGATACCACAGAAATaGTGCCATTATTTGAATGCA +
Preference number: 4 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPQIPQK*CHYLNA
Trigger: TGCATTCAAATAATGGCACCATTTCTGTGGTATCTG...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CCA 90 bp GAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCCAGATACCACAGAAATaGTGCCATTATTTGAATGCA +
Preference number: 4 (lower is better)
Translates to: ELKPNKENPSSCFSLNWPQIPQK*CHYLNA
Trigger: TGCATTCAAATAATGGCACCATTTCTGTGGTATCTG...GGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCTGGGAGGAATCTGCTTaGGCTAATTCTGTAGTGACC +
Preference number: 4 (lower is better)
Translates to: ENLHIELKPNKENPSSCFWEESA*ANSVVT
Trigger: GGTCACTACAGAATTAGCCCAAGCAGATTCCTCCCA...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAAATCAGTTTCTCCCATTaGACTTCCTTGCCCACCGAA +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIEISFSH*TSLPTE
Trigger: TTCGGTGGGCAAGGAAGTCCAATGGGAGAAACTGAT...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCAGTCTTCCCTGTAAAATaGCATGATAAGCTCGATTCA +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPVFPVK*HDKLDS
Trigger: TGAATCGAGCTTATCATGCCATTTTACAGGGAAGAC...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGAGAAGTTGCCCTCTaGGTTGGTAATGGCTATCCA +
Preference number: 4 (lower is better)
Translates to: ENLHIELKPNKENPSSCFREVAL*VGNGYP
Trigger: TGGATAGCCATTACCAACCCAGAGGGCAACTTCTCT...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCAAGAAGGTTCATCTCTTaGCCAGATATATCACTGAGT +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPRRFIS*PDISLS
Trigger: ACTCAGTGATATATCTGGCCAAGAGATGAACCTTCT...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAACCAGACAAAGCATTGTaGGAGTGCCCTCTGTTAGAA +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIEPDKAL*ECPLLE
Trigger: TTCTAACAGAGGGCACTCCCACAATGCTTTGTCTGG...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAATGGGATGACTGTGCCTaGGTCACCATAATTTCAAGG +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIEWDDCA*VTIISR
Trigger: CCTTGAAATTATGGTGACCCAGGCACAGTCATCCCA...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCATCAGGAGATATCTCTTaGTATTCAGACTCAGACTGT +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPSGDIS*YSDSDC
Trigger: ACAGTCTGAGTCTGAATACCAAGAGATATCTCCTGA...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCCTCACAATCCGTGCCTaGTATAAGCTGTGCAGAATC +
Preference number: 4 (lower is better)
Translates to: ENLHIELKPNKENPSSCFLTIRA*YKLCRI
Trigger: GATTCTGCACAGCTTATACCAGGCACGGATTGTGAG...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAACTCACAATCCGTGCCTaGTATAAGCTGTGCAGAATC +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIELTIRA*YKLCRI
Trigger: GATTCTGCACAGCTTATACCAGGCACGGATTGTGAG...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCCTTTCAAAAGATCCCTaGACTGTGCTGAGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: ENLHIELKPNKENPSSCFLSKDP*TVLRGL
Trigger: AAGCCCTCTCAGCACAGTCCAGGGATCTTTTGAAAG...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCAGCATATTCTTGTAACTaGGATGGTTCACAATACAGA +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPAYSCN*DGSQYR
Trigger: TCTGTATTGTGAACCATCTCAGTTACAAGAATATGC...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR TCA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATAATGTCACAACACAGTTaGAGTATCTGCTGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLIMSQHS*SICCSS
Trigger: ACTGGAACAGCAGATACTTCAACTGTGTTGTGACAT...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR TCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAAGACTTTGGGATTTTCTaGTCCTCAGTAACAGAGAGG +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIEDFGIF*SSVTER
Trigger: CCTCTCTGTTACTGAGGATCAGAAAATCCCAAAGTC...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR TCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCAGCTTACATATATCTCTaGTTGATGCTGCTTTTGCAA +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPAYIYL*LMLLLQ
Trigger: TTGCAAAAGCAGCATCAATCAGAGATATATGTAAGC...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATAATCTTTTCAGGCAGATaGAGAATGGTGTGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLIIFSGR*RMVCSP
Trigger: AGGAGAACACACCATTCTTCATCTGCCTGAAAAGAT...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCATGTACAAGAGCAAGTaGAGTCTGCTTGAAACTTCG +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVMYKSK*SLLETS
Trigger: CGAAGTTTCAAGCAGACTTCACTTGCTCTTGTACAT...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCCTGTTAGAACAATTCTaGTCCAGGCAGGGAGTAGTT +
Preference number: 4 (lower is better)
Translates to: ENLHIELKPNKENPSSCFLLEQF*SRQGVV
Trigger: AACTACTCCCTGCCTGGATCAGAATTGTTCTAACAG...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATAGGCATTTTGCTATGCTaGTATACAGCTCTAGATCCT +
Preference number: 4 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLIGILLC*YTALDP
Trigger: AGGATCTAGAGCTGTATATCAGCATAGCAAAATGCC...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCAAGACTAAGTACAGTTTaGCAAAGGCAGCTTTTTCTA +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPRLSTV*QRQLFL
Trigger: TAGAAAAAGCTGCCTTTGTCAAACTGTACTTAGTCT...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp TCAGTTGTATTGACCGTTAAGGAAGGAACTAGAGAAAATAGTTCACTCAGTGTCCCTGTCTCAGTCAGATaGTCTCATATTCAGTTGTAT +
Preference number: 4 (lower is better)
Translates to: SVVLTVKEGTRENSSLSVPVSVR*SHIQLY
Trigger: ATACAACTGAATATGAGATCATCTGACTGAGACAGG...GACACTGAGTGAACTATTTTCTCTAGTTCCTTCCTTAACGGTCAATACAACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603648.1
CDS-3UTR GCA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACCTTCCTTAAGAGCTTaGATTTGTAGTAAGTGCATA +
Preference number: 4 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPPSLRA*ICSKCI
Trigger: TATGCACTTACTACAAATGCAAGCTCTTAAGGAAGG...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR GCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCCACTTGAGAAATAGCTaGCAACATATCTGCACCATG +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVHLRNS*QHICTM
Trigger: CATGGTGCAGATATGTTGGCAGCTATTTCTCAAGTG...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCCTTGATCAGGCTTGGTaGATTCATTCAACACTTGAG +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVLDQAW*IHSTLE
Trigger: CTCAAGTGTTGAATGAATGCACCAAGCCTGATCAAG...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp AAGTATCTTCTAAGCCTGTCTCAGTCAGATGATCTCATATTCAGTTGTATTGACCTTGATCAGGCTTGGTaGATTCATTCAACACTTGAG +
Preference number: 4 (lower is better)
Translates to: KYLLSLSQSDDLIFSCIDLDQAW*IHSTLE
Trigger: CTCAAGTGTTGAATGAATGCACCAAGCCTGATCAAG...GTCAATACAACTGAATATGAGATCATCTGACTGAGACAGGCTTAGAAGATACTT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603648.1
CDS-3UTR GCA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATAAATGCTGCTGGTTACTaGAAAACTGTTCACCAACCA +
Preference number: 4 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLINAAGY*KTVHQP
Trigger: TGGTTGGTGAACAGTTTTGCAGTAACCAGCAGCATT...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp AAGTATCTTCTAAGCCTGTCTCAGTCAGATGATCTCATATTCAGTTGTATTGACAGCTGCCAACATATCTaGACCATGTTGATATGGCAT +
Preference number: 4 (lower is better)
Translates to: KYLLSLSQSDDLIFSCIDSCQHI*TMLIWH
Trigger: ATGCCATATCAACATGGTGCAGATATGTTGGCAGCT...GTCAATACAACTGAATATGAGATCATCTGACTGAGACAGGCTTAGAAGATACTT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603648.1
CDS-3UTR CCA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATATTGTACCATACATACTaGTTACAGGGCACACAAGCT +
Preference number: 4 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLILYHTY*LQGTQA
Trigger: AGCTTGTGTGCCCTGTAACCAGTATGTATGGTACAA...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCGCCAGGTTTCAGTCCTaGTTGCTTGTTTGTTTCATA +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVARFQS*LLVCFI
Trigger: TATGAAACAAACAAGCAACCAGGACTGAAACCTGGC...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATAGCCAGGTTTCAGTCCTaGTTGCTTGTTTGTTTCATA +
Preference number: 4 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLIARFQS*LLVCFI
Trigger: TATGAAACAAACAAGCAACCAGGACTGAAACCTGGC...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAATGAGAGGTCTGGATaGCTTCTGATTTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: ENLHIELKPNKENPSSCFNERSG*LLISAA
Trigger: TGCAGCTGAAATCAGAAGCCATCCAGACCTCTCATT...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAAGCTGTCAGTGATGTaGCCATCTTTTCATGACCCT +
Preference number: 4 (lower is better)
Translates to: ENLHIELKPNKENPSSCFKLSVM*PSFHDP
Trigger: AGGGTCATGAAAAGATGGCCACATCACTGACAGCTT...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
3UTR CAA 72 bp GCCTGTCTCAGTCAGATGATCTCATATTCAGTTGTATaGACCGTTAAGGAAGGAACTAGAGAAAATAGTTCA +
Preference number: 4 (lower is better)
Translates to: ACLSQMISYSVV*TVKEGTRENSS
Trigger: TGAACTATTTTCTCTAGTTCCTTCCTTAACGGTCAATACAACTGAATATGAGATCATCTGACTGAGACAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603648.1
CDS-3UTR TCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAACCTATACACACCTTGTaGACACCAAGCTTAGGTAAA +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIEPIHTL*TPSLGK
Trigger: TTTACCTAAGCTTGGTGTTCACAAGGTGTGTATAGG...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR TCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCAATGGCTATCCACAATaGCCAAGAGTGTATCAAGTA +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVNGYPQ*PRVYQV
Trigger: TACTTGATACACTCTTGGTCATTGTGGATAGCCATT...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATAGAGACACTAATGACCTaGGTTAAGGTTCTAATGACT +
Preference number: 4 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLIETLMT*VKVLMT
Trigger: AGTCATTAGAACCTTAACTCAGGTCATTAGTGTCTC...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp TCAGTTGTATTGACCGTTAAGGAAGGAACTAGAGAAAATAGTTCACTCAGTGTCGTGCAGCATTTAGAATaGGTTGAAGTATCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: SVVLTVKEGTRENSSLSVVQHLE*VEVSSK
Trigger: CTTAGAAGATACTTCAACTCATTCTAAATGCTGCAC...GACACTGAGTGAACTATTTTCTCTAGTTCCTTCCTTAACGGTCAATACAACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603648.1
CDS-3UTR GCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCGTAGAAGATAGTATCTaGAGAATTGGCATCACTAGC +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVVEDSI*RIGITS
Trigger: GCTAGTGATGCCAATTCTGCAGATACTATCTTCTAC...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR GCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAACACTTGAGAAATAGCTaGCAACATATCTGCACCATG +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIEHLRNS*QHICTM
Trigger: CATGGTGCAGATATGTTGGCAGCTATTTCTCAAGTG...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAATGCAACCACTGCGGTTaGAAATATCAGCAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIECNHCG*KYQQEE
Trigger: TTCTTCTTGCTGATATTTGCAACCGCAGTGGTTGCA...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCTGTTCACCAACCATATaGTCTGGTCCATACAGCTTT +
Preference number: 4 (lower is better)
Translates to: ENLHIELKPNKENPSSCFCSPTI*SGPYSF
Trigger: AAAGCTGTATGGACCAGAGCATATGGTTGGTGAACA...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAATGTTCACCAACCATATaGTCTGGTCCATACAGCTTT +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIECSPTI*SGPYSF
Trigger: AAAGCTGTATGGACCAGAGCATATGGTTGGTGAACA...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAAAATGCTGCTGGTTACTaGAAAACTGTTCACCAACCA +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIENAAGY*KTVHQP
Trigger: TGGTTGGTGAACAGTTTTGCAGTAACCAGCAGCATT...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAATGCTGCTGGTTACTaGAAAACTGTTCACCAACCA +
Preference number: 4 (lower is better)
Translates to: ENLHIELKPNKENPSSCFNAAGY*KTVHQP
Trigger: TGGTTGGTGAACAGTTTTGCAGTAACCAGCAGCATT...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATACTCTTAGTCGTGGTGTaGTTCCAAGTAGTTGTATTA +
Preference number: 4 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLILLVVV*FQVVVL
Trigger: TAATACAACTACTTGGAACCACACCACGACTAAGAG...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCAGGAATGGGAATTTCTaGTCTTATCTTTTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVRNGNF*SYLFRQ
Trigger: CTGCCTGAAAAGATAAGACCAGAAATTCCCATTCCT...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAAACCTGAAGTCTGCTaGCTATTCTCCACTAACAGT +
Preference number: 4 (lower is better)
Translates to: ENLHIELKPNKENPSSCFKPEVC*LFSTNS
Trigger: ACTGTTAGTGGAGAATAGCCAGCAGACTTCAGGTTT...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAAAAACCTGAAGTCTGCTaGCTATTCTCCACTAACAGT +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIEKPEVC*LFSTNS
Trigger: ACTGTTAGTGGAGAATAGCCAGCAGACTTCAGGTTT...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAGGAGATATCTCTTaGTATTCAGACTCAGACTGT +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVSGDIS*YSDSDC
Trigger: ACAGTCTGAGTCTGAATACCAAGAGATATCTCCTGA...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTTTCTTCTTAAACTCTaGGAGAACTCTCAAGGACAG +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVFLLKL*ENSQGQ
Trigger: CTGTCCTTGAGAGTTCTCCCAGAGTTTAAGAAGAAA...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATAGCATATTCTTGTAACTaGGATGGTTCACAATACAGA +
Preference number: 4 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLIAYSCN*DGSQYR
Trigger: TCTGTATTGTGAACCATCTCAGTTACAAGAATATGC...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR TCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAATCCAGTATTGATGGTTaGTCTTTGTCACAAAGAACC +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIESSIDG*SLSQRT
Trigger: GGTTCTTTGTGACAAAGATCAACCATCAATACTGGA...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR TCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCCTGTGCTCTAAAAGGTaGATTGAAGATGAACATTCA +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVLCSKR*IEDEHS
Trigger: TGAATGTTCATCTTCAATTCACCTTTTAGAGCACAG...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR TCA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATAACCTTGAGTATTTGGTaGAGATTTTGTCCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLITLSIW*RFCPLS
Trigger: AGACAAAGGACAAAATCTTCACCAAATACTCAAGGT...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR TCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCGCTTACATATATCTCTaGTTGATGCTGCTTTTGCAA +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVAYIYL*LMLLLQ
Trigger: TTGCAAAAGCAGCATCAATCAGAGATATATGTAAGC...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATACATATTCAGTTGTATTaGCCGTTAAGGAAGGAACTA +
Preference number: 4 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLIHIQLY*PLRKEL
Trigger: TAGTTCCTTCCTTAACGGTCAATACAACTGAATATG...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AAGTATCTTCTAAGCCTGTCTCAGTCAGATGATCTCATATTCAGTTGTATTGACCATATTCAGTTGTATTaGCCGTTAAGGAAGGAACTA +
Preference number: 4 (lower is better)
Translates to: KYLLSLSQSDDLIFSCIDHIQLY*PLRKEL
Trigger: TAGTTCCTTCCTTAACGGTCAATACAACTGAATATG...GTCAATACAACTGAATATGAGATCATCTGACTGAGACAGGCTTAGAAGATACTT
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603648.1
CDS-3UTR TCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCAACCCACTCTTTCATTaGAAGGAAATTAGGTTGAAC +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVNPLFH*KEIRLN
Trigger: GTTCAACCTAATTTCCTTTCAATGAAAGAGTGGGTT...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCATTGTGAAAGGATGTTaGCTGGTAAGCAACATTTCT +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVIVKGC*LVSNIS
Trigger: AGAAATGTTGCTTACCAGTCAACATCCTTTCACAAT...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCGGATGGAAATTTCCTTaGTGGTCAATTAAGAATGGA +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVGWKFP*WSIKNG
Trigger: TCCATTCTTAATTGACCATCAAGGAAATTTCCATCC...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380249.5
CDS-3UTR TCA 90 bp AAGTATCTTCTAAGCCTGTCTCAGTCAGATGATCTCATATTCAGTTGTATTGACTATGGCATATATCTCTaGTTGATGCTGCTTTTGCAA +
Preference number: 4 (lower is better)
Translates to: KYLLSLSQSDDLIFSCIDYGIYL*LMLLLQ
Trigger: TTGCAAAAGCAGCATCAATCAGAGATATATGCCATA...GTCAATACAACTGAATATGAGATCATCTGACTGAGACAGGCTTAGAAGATACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603648.1
CDS-3UTR GCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCGTAGAAGATAGTATCTaGAGAATTGGCATCACTAGC +
Preference number: 4 (lower is better)
Translates to: ENLHIELKPNKENPSSCFVEDSI*RIGITS
Trigger: GCTAGTGATGCCAATTCTGCAGATACTATCTTCTAC...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR GCA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATATCTATATGCAGCATTTaGTACAATTGGGTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLISICSI*YNWVLV
Trigger: AACAAGGACCCAATTGTAGCAAATGCTGCATATAGA...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCATTTCAAGGCACAGTTaGTGGATCTCTTCACCAAAA +
Preference number: 4 (lower is better)
Translates to: ENLHIELKPNKENPSSCFISRHS*WISSPK
Trigger: TTTTGGTGAAGAGATCCAGCAACTGTGCCTTGAAAT...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAAATTTCAAGGCACAGTTaGTGGATCTCTTCACCAAAA +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIEISRHS*WISSPK
Trigger: TTTTGGTGAAGAGATCCAGCAACTGTGCCTTGAAAT...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTTTTATCCACAGAGGTaGAGATATCAGGAGATATCT +
Preference number: 4 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVFYPQR*RYQEIS
Trigger: AGATATCTCCTGATATCTGCACCTCTGTGGATAAAA...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATATTTTACCTGCAAACATaGAACTATGTCACAACACAG +
Preference number: 4 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLIFYLQT*NYVTTQ
Trigger: CTGTGTTGTGACATAGTTCCATGTTTGCAGGTAAAA...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CCA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATAAGCATTTGCTACAATTaGGTCCTTGTTTTGAGTATG +
Preference number: 4 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLISICYN*VLVLSM
Trigger: CATACTCAAAACAAGGACCCAATTGTAGCAAATGCT...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGGAATGGGAATTTCTaGTCTTATCTTTTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: ENLHIELKPNKENPSSCFRNGNF*SYLFRQ
Trigger: CTGCCTGAAAAGATAAGACCAGAAATTCCCATTCCT...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCGTGTATCAAGTACCATaGAAACCCACTCTTTCATTG +
Preference number: 4 (lower is better)
Translates to: ENLHIELKPNKENPSSCFVYQVP*KPTLSL
Trigger: CAATGAAAGAGTGGGTTTCCATGGTACTTGATACAC...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAATCAGGAGATATCTCTTaGTATTCAGACTCAGACTGT +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIESGDIS*YSDSDC
Trigger: ACAGTCTGAGTCTGAATACCAAGAGATATCTCCTGA...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAATTTCTTCTTAAACTCTaGGAGAACTCTCAAGGACAG +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIEFLLKL*ENSQGQ
Trigger: CTGTCCTTGAGAGTTCTCCCAGAGTTTAAGAAGAAA...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp TCAGTTGTATTGACCGTTAAGGAAGGAACTAGAGAAAATAGTTCACTCAGTGTCTGCACCATGTTGATATaGCATATATCTCTGATTGAT +
Preference number: 4 (lower is better)
Translates to: SVVLTVKEGTRENSSLSVCTMLI*HISLID
Trigger: ATCAATCAGAGATATATGCCATATCAACATGGTGCA...GACACTGAGTGAACTATTTTCTCTAGTTCCTTCCTTAACGGTCAATACAACTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603648.1
CDS-3UTR TCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCACCTTGAGTATTTGGTaGAGATTTTGTCCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: ENLHIELKPNKENPSSCFTLSIW*RFCPLS
Trigger: AGACAAAGGACAAAATCTTCACCAAATACTCAAGGT...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR TCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCGCTTACATATATCTCTaGTTGATGCTGCTTTTGCAA +
Preference number: 4 (lower is better)
Translates to: ENLHIELKPNKENPSSCFAYIYL*LMLLLQ
Trigger: TTGCAAAAGCAGCATCAATCAGAGATATATGTAAGC...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR TCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAAATTGTGAAAGGATGTTaGCTGGTAAGCAACATTTCT +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIEIVKGC*LVSNIS
Trigger: AGAAATGTTGCTTACCAGTCAACATCCTTTCACAAT...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCTCTATATGCAGCATTTaGTACAATTGGGTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: ENLHIELKPNKENPSSCFSICSI*YNWVLV
Trigger: AACAAGGACCCAATTGTAGCAAATGCTGCATATAGA...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR GCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAATCTATATGCAGCATTTaGTACAATTGGGTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIESICSI*YNWVLV
Trigger: AACAAGGACCCAATTGTAGCAAATGCTGCATATAGA...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CCA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAAAGCATTTGCTACAATTaGGTCCTTGTTTTGAGTATG +
Preference number: 4 (lower is better)
Translates to: SREKIISSSFHKENLHIESICYN*VLVLSM
Trigger: CATACTCAAAACAAGGACCCAATTGTAGCAAATGCT...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS GCA 90 bp CGCGCACTGCGGTTGAAAGGCGGCGTGGGCGGCGGACCCGCGCTCTaGAGCCGAGCTGGTGCGGGGAGGGCTGCGCGCGGGGGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: RALRLKGGVGGGPAL*SRAGAGRAARGGWL
Trigger: CAGCCAGCCCCCGCGCGCAGCCCTCCCCGCACCAGCTCGGCTGCAGAGCGCGGGTCCGCCGCCCACGCCGCCTTTCAACCGCAGTGCGCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604036.1
CDS TCA 90 bp GGCTCGCGCGCACGCGCGTCTAAGGCCCGGGCCGCGCACTGCGGTTaGAAGGCGGCGTGGGCGGCGGACCCGCGCTCTGCAGCCGAGCTG +
Preference number: 5 (lower is better)
Translates to: GSRARASKARAAHCG*KAAWAADPRSAAEL
Trigger: CAGCTCGGCTGCAGAGCGCGGGTCCGCCGCCCACGCCGCCTTTCAACCGCAGTGCGCGGCCCGGGCCTTAGACGCGCGTGCGCGCGAGCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604036.1
CDS GCA 90 bp GTGTGCAGCTTCTCCCTTCTGCCACAAGCTCAGCCCAGCGCCGGCTaGCTGACGTGGCCCGCCCCGCCGCCTCGAACGCCCGGGGGCGGG +
Preference number: 5 (lower is better)
Translates to: VCSFSLLPQAQPSAG*LTWPAPPPRTPGGG
Trigger: CCCGCCCCCGGGCGTTCGAGGCGGCGGGGCGGGCCACGTCAGGCAGCCGGCGCTGGGCTGAGCTTGTGGCAGAAGGGAGAAGCTGCACAC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604036.1
CDS TCA 90 bp GAGTCCTACGCCCACGGAGTCTCACTGATTGCTAGCACAGCAGTCTaGGATCAACCTGCAAGGCGGCAGCGAGGCTGCGGGAGGGGCGCC +
Preference number: 5 (lower is better)
Translates to: ESYAHGVSLIASTAV*DQPARRQRGCGRGA
Trigger: GGCGCCCCTCCCGCAGCCTCGCTGCCGCCTTGCAGGTTGATCTCAGACTGCTGTGCTAGCAATCAGTGAGACTCCGTGGGCGTAGGACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380249.5
CDS GCA 90 bp GCTCCCGCTGTCATCTACGTGCGCAGACAGCTTCCGGAGCAATGCTaGTACGTGAACGCGGGACTGCATTTGGCTGCTGTGGCTCATGAG +
Preference number: 5 (lower is better)
Translates to: APAVIYVRRQLPEQC*YVNAGLHLAAVAHE
Trigger: CTCATGAGCCACAGCAGCCAAATGCAGTCCCGCGTTCACGTAGCAGCATTGCTCCGGAAGCTGTCTGCGCACGTAGATGACAGCGGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000603044.5
ENST00000604254.5
ENST00000605086.5
CDS GCA 90 bp CTGGCTCCCGCTGTCATCTACGTGCGCAGACAGCTTCCGGAGCAATaGTGCTACGTGAACGCGGGACTGCATTTGGCTGCTGTGGCTCAT +
Preference number: 5 (lower is better)
Translates to: LAPAVIYVRRQLPEQ*CYVNAGLHLAAVAH
Trigger: ATGAGCCACAGCAGCCAAATGCAGTCCCGCGTTCACGTAGCAGCATTGCTCCGGAAGCTGTCTGCGCACGTAGATGACAGCGGGAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000603044.5
ENST00000604254.5
ENST00000605086.5
CDS TCA 90 bp CTGTCATCTACGTGCGCAGACAGCTTCCGGAGCAATGCTGCTACGTaGACGCGGGACTGCATTTGGCTGCTGTGGCTCATGAGGGACAGA +
Preference number: 5 (lower is better)
Translates to: LSSTCADSFRSNAAT*TRDCIWLLWLMRDR
Trigger: TCTGTCCCTCATGAGCCACAGCAGCCAAATGCAGTCCCGCGTTCACGTAGCAGCATTGCTCCGGAAGCTGTCTGCGCACGTAGATGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000603044.5
ENST00000604254.5
ENST00000605086.5
CDS GCA 90 bp ATGCTATTGGGAAGGAGAGTGAGAACCTCCTGCAGAGTGACCCTGTaGATTGGACTCCTGCCAAGGAAGCTTGGTACTGGCCCAGCCGGG +
Preference number: 5 (lower is better)
Translates to: MLLGRRVRTSCRVTL*IGLLPRKLGTGPAG
Trigger: CCCGGCTGGGCCAGTACCAAGCTTCCTTGGCAGGAGTCCAATGCACAGGGTCACTCTGCAGGAGGTTCTCACTCTCCTTCCCAATAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTTCCTGCCAAGGAAGCTaGGTACTGGCCCAGCCGGGC +
Preference number: 5 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLSCQGS*VLAQPG
Trigger: GCCCGGCTGGGCCAGTACCAAGCTTCCTTGGCAGGA...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS GCA 90 bp ACGCCCGTATTGGCATGGCTCACAATCCGTGCCTGGTATAAGCTGTaGAGAATCATCCAGGCCAACACCTCTTTCTCACGGTGCTGCACA +
Preference number: 5 (lower is better)
Translates to: TPVLAWLTIRAWYKL*RIIQANTSFSRCCT
Trigger: TGTGCAGCACCGTGAGAAAGAGGTGTTGGCCTGGATGATTCTGCACAGCTTATACCAGGCACGGATTGTGAGCCATGCCAATACGGGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS GCA 90 bp GAGGAGGAGAGGGGCAGTGTGGTCAGCCCATGCAACCACTGCGGTTaGAAATATCAGCAAGAAGAAGTCCAAAGCCTTGTCAAGAGCCGT +
Preference number: 5 (lower is better)
Translates to: EEERGSVVSPCNHCG*KYQQEEVQSLVKSR
Trigger: ACGGCTCTTGACAAGGCTTTGGACTTCTTCTTGCTGATATTTGCAACCGCAGTGGTTGCATGGGCTGACCACACTGCCCCTCTCCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCAACGCGGGACTGCATTaGGCTGCTGTGGCTCATGAG +
Preference number: 5 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVANAGLH*AAVAHE
Trigger: CTCATGAGCCACAGCAGCCAAATGCAGTCCCGCGTT...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS TCA 90 bp ATGCTGCTACGTGAACGCGGGACTGCATTTGGCTGCTGTGGCTCATaGGGGACAGAACAAGTCCAACTCCCAATATACAGCCCGTGTTGT +
Preference number: 5 (lower is better)
Translates to: MLLRERGTAFGCCGS*GTEQVQLPIYSPCC
Trigger: ACAACACGGGCTGTATATTGGGAGTTGGACTTGTTCTGTCCCTCATGAGCCACAGCAGCCAAATGCAGTCCCGCGTTCACGTAGCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000603044.5
ENST00000603695.1
ENST00000604254.5
ENST00000605086.5
CDS TCA 90 bp CCCAGCGTGAGCGATGGAGAAGACGGTGATTTCTGCATTTCCATCTaGGATACCGAGTTCATCTCACTGGCTTGGAGAGTCCTACGCCCA +
Preference number: 5 (lower is better)
Translates to: PSVSDGEDGDFCISI*DTEFISLAWRVLRP
Trigger: TGGGCGTAGGACTCTCCAAGCCAGTGAGATGAACTCGGTATCTCAGATGGAAATGCAGAAATCACCGTCTTCTCCATCGCTCACGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380249.5
CDS GCA 90 bp ATTTCAGCTGCATTACATCCCCTTCAGAGCCTACCAAGGCCACCATaGCATGAAGAGCTGCCAGACAAAGCATTGTGGGAGTGCCCTCTG +
Preference number: 5 (lower is better)
Translates to: ISAALHPLQSLPRPP*HEELPDKALWECPL
Trigger: CAGAGGGCACTCCCACAATGCTTTGTCTGGCAGCTCTTCATGGCATGGTGGCCTTGGTAGGCTCTGAAGGGGATGTAATGCAGCTGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCCAGGCAGGGAGTAGTTaGCTGCCCAAGTCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAQAGSS*LPKSSA
Trigger: AGCTGAAGACTTGGGCAGCAAACTACTCCCTGCCTG...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS TCA 90 bp GGACTTCCTTGCCCACCGAAAGAGAAGGTACATCAGACACAGCCATaGAACGCTGCAGTTCAGGATAGACTCGGTCCTGCTTTTCCCACA +
Preference number: 5 (lower is better)
Translates to: GLPCPPKEKVHQTQP*NAAVQDRLGPAFPT
Trigger: TGTGGGAAAAGCAGGACCGAGTCTATCCTGAACTGCAGCGTTTCATGGCTGTGTCTGATGTACCTTCTCTTTCGGTGGGCAAGGAAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000603492.1
ENST00000603648.1
ENST00000605086.5
CDS TCA 90 bp GAGAGAAACATCCCTAAAGCAAGGCCCATGTGGATTTGCACGGCTTaGGACTCATCAGCACTTGGTTTCCCAGGTAACCTGGCAGTCAGC +
Preference number: 5 (lower is better)
Translates to: ERNIPKARPMWICTA*DSSALGFPGNLAVS
Trigger: GCTGACTGCCAGGTTACCTGGGAAACCAAGTGCTGATGAGTCTCAAGCCGTGCAAATCCACATGGGCCTTGCTTTAGGGATGTTTCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000603044.5
ENST00000603695.1
ENST00000605086.5
CDS CCA 90 bp ATCAGTGGTGGTGTCACCCACAAGCCCAATAGTGCAGCTGCATTCTaGGATGACTGTGCCTGGGTCACCATAATTTCAAGGCACAGTTGC +
Preference number: 5 (lower is better)
Translates to: ISGGVTHKPNSAAAF*DDCAWVTIISRHSC
Trigger: GCAACTGTGCCTTGAAATTATGGTGACCCAGGCACAGTCATCCCAGAATGCAGCTGCACTATTGGGCTTGTGGGTGACACCACCACTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000603631.1
ENST00000605086.5
CDS-3UTR CAA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCTCCCATTGGACTTCCTaGCCCACCGAAAGAGAAGGT +
Preference number: 5 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVASHWTS*PTEREG
Trigger: ACCTTCTCTTTCGGTGGGCAAGGAAGTCCAATGGGA...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCCTGCCAGACAAAGCATaGTGGGAGTGCCCTCTGTTA +
Preference number: 5 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVALPDKA*WECPLL
Trigger: TAACAGAGGGCACTCCCACAATGCTTTGTCTGGCAG...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp GAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCTCCTGCCAAGGAAGCTaGGTACTGGCCCAGCCGGGC +
Preference number: 5 (lower is better)
Translates to: ELKPNKENPSSCFSLNWPSCQGS*VLAQPG
Trigger: GCCCGGCTGGGCCAGTACCAAGCTTCCTTGGCAGGA...GGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS TCA 90 bp CAAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTaGGCGATGGAGAAGACGGTGATTTCTGCATTTCCATCTGAGATA +
Preference number: 5 (lower is better)
Translates to: QRWPNRNSSGLQLPA*AMEKTVISAFPSEI
Trigger: TATCTCAGATGGAAATGCAGAAATCACCGTCTTCTCCATCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380249.5
CDS GCA 90 bp CCCATTGAGAACATAGCTGAACTCTGCATGATCCTGAGCAACGAGTaGCACCAGACCTTCACAGCAGGCTGTTCGAACCACTACATTGTC +
Preference number: 5 (lower is better)
Translates to: PIENIAELCMILSNE*HQTFTAGCSNHYIV
Trigger: GACAATGTAGTGGTTCGAACAGCCTGCTGTGAAGGTCTGGTGGCACTCGTTGCTCAGGATCATGCAGAGTTCAGCTATGTTCTCAATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS CCA 90 bp ACCCACAAGCCCAATAGTGCAGCTGCATTCTGGGATGACTGTGCCTaGGTCACCATAATTTCAAGGCACAGTTGCTGGATCTCTTCACCA +
Preference number: 5 (lower is better)
Translates to: THKPNSAAAFWDDCA*VTIISRHSCWISSP
Trigger: TGGTGAAGAGATCCAGCAACTGTGCCTTGAAATTATGGTGACCCAGGCACAGTCATCCCAGAATGCAGCTGCACTATTGGGCTTGTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000603631.1
ENST00000605086.5
CDS CCA 90 bp ACGGTGATTTCTGCATTTCCATCTGAGATACCGAGTTCATCTCACTaGCTTGGAGAGTCCTACGCCCACGGAGTCTCACTGATTGCTAGC +
Preference number: 5 (lower is better)
Translates to: TVISAFPSEIPSSSH*LGESYAHGVSLIAS
Trigger: GCTAGCAATCAGTGAGACTCCGTGGGCGTAGGACTCTCCAAGCCAGTGAGATGAACTCGGTATCTCAGATGGAAATGCAGAAATCACCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380249.5
CDS-3UTR CAA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCGCAGCAGAGAGGACTTaGGGATTTTCTGATCCTCAG +
Preference number: 5 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAAAERT*GFSDPQ
Trigger: CTGAGGATCAGAAAATCCCAAAGTCCTCTCTGCTGC...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CAA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTGCAAGTGAAGTCTGCTaGAAACTTCGCCCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLASEVC*KLRPLL
Trigger: CAGCAGAGGGCGAAGTTTCAAGCAGACTTCACTTGC...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCAAACCAGGAGAGAAGTaGCCCTCTGGGTTGGTAATG +
Preference number: 5 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAKPGEK*PSGLVM
Trigger: CATTACCAACCCAGAGGGCAACTTCTCTCCTGGTTT...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTCTGCCAGACAAAGCATaGTGGGAGTGCCCTCTGTTA +
Preference number: 5 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLLPDKA*WECPLL
Trigger: TAACAGAGGGCACTCCCACAATGCTTTGTCTGGCAG...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCTTCAAAACGCCCGTATaGGCATGGCTCACAATCCGT +
Preference number: 5 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAFKTPV*AWLTIR
Trigger: ACGGATTGTGAGCCATGCCAATACGGGCGTTTTGAA...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS GCA 90 bp CCACCAGACCTTCACAGCAGGCTGTTCGAACCACTACATTGTCACTaGAACACTTCTCCCACAGCAAGTTCAAAGCAGGAGTCTGATTTG +
Preference number: 5 (lower is better)
Translates to: PPDLHSRLFEPLHCH*NTSPTASSKQESDL
Trigger: CAAATCAGACTCCTGCTTTGAACTTGCTGTGGGAGAAGTGTTGCAGTGACAATGTAGTGGTTCGAACAGCCTGCTGTGAAGGTCTGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CAA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCTCTCCTGCACTAAAGTaGGCCAGGGATCTATATGCA +
Preference number: 5 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVASPALK*ARDLYA
Trigger: TGCATATAGATCCCTGGCCAACTTTAGTGCAGGAGA...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCAAGTTGCCCTCTGGGTaGGTAATGGCTATCCACAAT +
Preference number: 5 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAKLPSG*VMAIHN
Trigger: ATTGTGGATAGCCATTACCAACCCAGAGGGCAACTT...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGAACGCGGGACTGCATTaGGCTGCTGTGGCTCATGAG +
Preference number: 5 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMNAGLH*AAVAHE
Trigger: CTCATGAGCCACAGCAGCCAAATGCAGTCCCGCGTT...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS TCA 90 bp CATAAAGAAGAGGACACGGGAACCTACCTCATGTACAAGAGCAAGTaGAGTCTGCTTGAAACTTCGCCCTCTGCTGGCCATCAGTCTGTT +
Preference number: 5 (lower is better)
Translates to: HKEEDTGTYLMYKSK*SLLETSPSAGHQSV
Trigger: AACAGACTGATGGCCAGCAGAGGGCGAAGTTTCAAGCAGACTTCACTTGCTCTTGTACATGAGGTAGGTTCCCGTGTCCTCTTCTTTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603552.1
CDS GCA 90 bp GAAACTTCTAACCTTTCAGGGCACTGCTGGAAAAACGCTGTCAGCTaGTGCAAAAACACTGGCCAGCAATCAGGTCTGTGTTCAAGCACA +
Preference number: 5 (lower is better)
Translates to: ETSNLSGHCWKNAVS*CKNTGQQSGLCSST
Trigger: TGTGCTTGAACACAGACCTGATTGCTGGCCAGTGTTTTTGCAGCAGCTGACAGCGTTTTTCCAGCAGTGCCCTGAAAGGTTAGAAGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605031.5
CDS GCA 90 bp TGCATGAAACTTCTTTCAGGGCACTGCTGGAAAAACGCTGTCAGCTaGTGCAAAAACACTGGCCAGCAATCAGGTCTGTGTTCAAGCACA +
Preference number: 5 (lower is better)
Translates to: CMKLLSGHCWKNAVS*CKNTGQQSGLCSST
Trigger: TGTGCTTGAACACAGACCTGATTGCTGGCCAGTGTTTTTGCAGCAGCTGACAGCGTTTTTCCAGCAGTGCCCTGAAAGAAGTTTCATGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000604103.1
CDS CCA 90 bp GTTCAGGATTTCCTCAACCTTCTCTTTGCAAGAGATAATGAAAACTaGCACAAGGAGAGACAAAGCCGTGGCGGCAGCAGAACGGGCAAT +
Preference number: 5 (lower is better)
Translates to: VQDFLNLLFARDNEN*HKERQSRGGSRTGN
Trigger: ATTGCCCGTTCTGCTGCCGCCACGGCTTTGTCTCTCCTTGTGCCAGTTTTCATTATCTCTTGCAAAGAGAAGGTTGAGGAAATCCTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000603044.5
ENST00000603695.1
ENST00000605086.5
CDS CCA 90 bp TTTGCACGGCTTGAGACTCATCAGCACTTGGTTTCCCAGGTAACCTaGCAGTCAGCATGTTCAGGATTTCCTCAACCTTCTCTTTGCAAG +
Preference number: 5 (lower is better)
Translates to: FARLETHQHLVSQVT*QSACSGFPQPSLCK
Trigger: CTTGCAAAGAGAAGGTTGAGGAAATCCTGAACATGCTGACTGCCAGGTTACCTGGGAAACCAAGTGCTGATGAGTCTCAAGCCGTGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000603044.5
ENST00000603695.1
ENST00000605086.5
CDS-3UTR CAA 90 bp CTCAGTGTCTTCAGAATGAGAGGTCTTGTGTCACAACTCAGCTTTGGAGAGAGATCCCATTGGACTTCCTaGCCCACCGAAAGAGAAGGT +
Preference number: 5 (lower is better)
Translates to: LSVFRMRGLVSQLSFGERSHWTS*PTEREG
Trigger: ACCTTCTCTTTCGGTGGGCAAGGAAGTCCAATGGGA...TCTCTCTCCAAAGCTGAGTTGTGACACAAGACCTCTCATTCTGAAGACACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603648.1
CDS-3UTR CAA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCCATATCTGCACCATGTaGATATGGCCTCTGCTTACA +
Preference number: 5 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAHICTM*IWPLLT
Trigger: TGTAAGCAGAGGCCATATCAACATGGTGCAGATATG...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGAGAGCTAACAGCGCATaGCCTTTCACTACCGGACTC +
Preference number: 5 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGRANSA*PFTTGL
Trigger: GAGTCCGGTAGTGAAAGGCAATGCGCTGTTAGCTCT...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGGAGACTCATCAGCACTaGGTTTCCCAGGTAACCTGG +
Preference number: 5 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGETHQH*VSQVTW
Trigger: CCAGGTTACCTGGGAAACCAAGTGCTGATGAGTCTC...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGGAAGCCAGACTGCATTaGACTGGAGACCAATCACCC +
Preference number: 5 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGEARLH*TGDQSP
Trigger: GGGTGATTGGTCTCCAGTCAAATGCAGTCTGGCTTC...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCATGCAACCACTGCGGTaGCAAATATCAGCAAGAAGA +
Preference number: 5 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAMQPLR*QISARR
Trigger: TCTTCTTGCTGATATTTGCAACCGCAGTGGTTGCAT...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCAAGCTAGATTTAAGATaGGCTTCTGCTGACTTGCTG +
Preference number: 5 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAKLDLR*ASADLL
Trigger: CAGCAAGTCAGCAGAAGCCAATCTTAAATCTAGCTT...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CAA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGAATCAGTTTCTCCCATaGGACTTCCTTGCCCACCGA +
Preference number: 5 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGNQFLP*DFLAHR
Trigger: TCGGTGGGCAAGGAAGTCCAATGGGAGAAACTGATT...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGCTGCTGGAGTAGCTaGATCAGGCTTGGTGCATTC +
Preference number: 5 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPGCWSS*IRLGAF
Trigger: GAATGCACCAAGCCTGATCAAGCTACTCCAGCAGCC...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGAAACCAGGAGAGAAGTaGCCCTCTGGGTTGGTAATG +
Preference number: 5 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGKPGEK*PSGLVM
Trigger: CATTACCAACCCAGAGGGCAACTTCTCTCCTGGTTT...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGGAAGCCAGACTGCATTaGACTGGAGACCAATCACCC +
Preference number: 5 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMEARLH*TGDQSP
Trigger: GGGTGATTGGTCTCCAGTCAAATGCAGTCTGGCTTC...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCTCCTGCCAAGGAAGCTaGGTACTGGCCCAGCCGGGC +
Preference number: 5 (lower is better)
Translates to: ENLHIELKPNKENPSSCFSCQGS*VLAQPG
Trigger: GCCCGGCTGGGCCAGTACCAAGCTTCCTTGGCAGGA...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS TCA 90 bp ACCAGGAGAGAAGTTGCCCTCTGGGTTGGTAATGGCTATCCACAATaGCCAAGAGTGTATCAAGTACCATGGAAACCCACTCTTTCATTG +
Preference number: 5 (lower is better)
Translates to: TRREVALWVGNGYPQ*PRVYQVPWKPTLSL
Trigger: CAATGAAAGAGTGGGTTTCCATGGTACTTGATACACTCTTGGTCATTGTGGATAGCCATTACCAACCCAGAGGGCAACTTCTCTCCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS TCA 90 bp AACATCCTCAGCCTCTGTAGCCTCAATAATTCCAGCACTGAACGCTaGTGTACATACACAGCTAAGTGTGTAGGCAAGGACCTCCTGAAA +
Preference number: 5 (lower is better)
Translates to: NILSLCSLNNSSTER*CTYTAKCVGKDLLK
Trigger: TTTCAGGAGGTCCTTGCCTACACACTTAGCTGTGTATGTACATCAGCGTTCAGTGCTGGAATTATTGAGGCTACAGAGGCTGAGGATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000604254.5
ENST00000605086.5
CDS CCA 90 bp TCACCAACCATATGCTCTGGTCCATACAGCTTTCTTCTTAAACTCTaGGAGAACTCTCAAGGACAGCAGGGTGGCTTTCAAAAGATCCCT +
Preference number: 5 (lower is better)
Translates to: SPTICSGPYSFLLKL*ENSQGQQGGFQKIP
Trigger: AGGGATCTTTTGAAAGCCACCCTGCTGTCCTTGAGAGTTCTCCCAGAGTTTAAGAAGAAAGCTGTATGGACCAGAGCATATGGTTGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGAATCAGTTTCTCCCATaGGACTTCCTTGCCCACCGA +
Preference number: 5 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMNQFLP*DFLAHR
Trigger: TCGGTGGGCAAGGAAGTCCAATGGGAGAAACTGATT...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCGCATTCATTCAACACTaGAGAAATAGCTGCCAACAT +
Preference number: 5 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAAFIQH*RNSCQH
Trigger: ATGTTGGCAGCTATTTCTCAAGTGTTGAATGAATGC...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGCAAGTGAAGTCTGCTaGAAACTTCGCCCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPASEVC*KLRPLL
Trigger: CAGCAGAGGGCGAAGTTTCAAGCAGACTTCACTTGC...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp GAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCAGAGCTAACAGCGCATaGCCTTTCACTACCGGACTC +
Preference number: 5 (lower is better)
Translates to: ELKPNKENPSSCFSLNWPRANSA*PFTTGL
Trigger: GAGTCCGGTAGTGAAAGGCAATGCGCTGTTAGCTCT...GGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp GAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGAGACTCATCAGCACTaGGTTTCCCAGGTAACCTGG +
Preference number: 5 (lower is better)
Translates to: ELKPNKENPSSCFSLNWPETHQH*VSQVTW
Trigger: CCAGGTTACCTGGGAAACCAAGTGCTGATGAGTCTC...GGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGAGACTCATCAGCACTaGGTTTCCCAGGTAACCTGG +
Preference number: 5 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPETHQH*VSQVTW
Trigger: CCAGGTTACCTGGGAAACCAAGTGCTGATGAGTCTC...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGTGGATTTGCACGGCTaGAGACTCATCAGCACTTGG +
Preference number: 5 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPVDLHG*RLISTW
Trigger: CCAAGTGCTGATGAGTCTCAAGCCGTGCAAATCCAC...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACAGGCAGGGAGTAGTTaGCTGCCCAAGTCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPQAGSS*LPKSSA
Trigger: AGCTGAAGACTTGGGCAGCAAACTACTCCCTGCCTG...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGCTGCCAGACAAAGCATaGTGGGAGTGCCCTCTGTTA +
Preference number: 5 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPLPDKA*WECPLL
Trigger: TAACAGAGGGCACTCCCACAATGCTTTGTCTGGCAG...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTAGCTTTCTCCAACAGTaGCTATGGGTTTCATCACTA +
Preference number: 5 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLSFLQQ*LWVSSL
Trigger: TAGTGATGAAACCCATAGCAACTGTTGGAGAAAGCT...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTAATTTCAAGGCACAGTaGCTGGATCTCTTCACCAAA +
Preference number: 5 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLNFKAQ*LDLFTK
Trigger: TTTGGTGAAGAGATCCAGCAACTGTGCCTTGAAATT...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp GAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGACCGTGTAAAGCACTaGGGCATAGCTCAGGACTTC +
Preference number: 5 (lower is better)
Translates to: ELKPNKENPSSCFSLNWPDRVKH*GIAQDF
Trigger: GAAGTCCTGAGCTATGCCCAAGTGCTTTACACGGTC...GGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGACCTGGGCGATCCGATaGGCATCATCATCTGTCATT +
Preference number: 5 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMTWAIR*ASSSVI
Trigger: AATGACAGATGATGATGCCAATCGGATCGCCCAGGT...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGTTCAAAACGCCCGTATaGGCATGGCTCACAATCCGT +
Preference number: 5 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMFKTPV*AWLTIR
Trigger: ACGGATTGTGAGCCATGCCAATACGGGCGTTTTGAA...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS TCA 90 bp ACAGTCTTTCCTTGGTCTGAGCGGGCACCTCCTTTTAATGCAGAGTaGTATATCCCACGAGGCATATTCACCATTTCTTGCTTCACAAGT +
Preference number: 5 (lower is better)
Translates to: TVFPWSERAPPFNAE*YIPRGIFTISCFTS
Trigger: ACTTGTGAAGCAAGAAATGGTGAATATGCCTCGTGGGATATATCACTCTGCATTAAAAGGAGGTGCCCGCTCAGACCAAGGAAAGACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
ENST00000605852.1
CDS TCA 90 bp AAAGCTGGATATGAACCTCATGTACAAGAGCAAGTGAAGTCTGCTTaGAACTTCGCCCTCTGCTGGCCATCAGTCTGTTCAATGGTTTTC +
Preference number: 5 (lower is better)
Translates to: KAGYEPHVQEQVKSA*NFALCWPSVCSMVF
Trigger: GAAAACCATTGAACAGACTGATGGCCAGCAGAGGGCGAAGTTTCAAGCAGACTTCACTTGCTCTTGTACATGAGGTTCATATCCAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
ENST00000605852.1
CDS-3UTR CAA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCACATCATCGCCTCTGTaGTCTGTATCAAATCTTTTA +
Preference number: 5 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVATSSPL*SVSNLL
Trigger: TAAAAGATTTGATACAGACAACAGAGGCGATGATGT...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CAA 90 bp GAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGCAGCAGAGAGGACTTaGGGATTTTCTGATCCTCAG +
Preference number: 5 (lower is better)
Translates to: ELKPNKENPSSCFSLNWPAAERT*GFSDPQ
Trigger: CTGAGGATCAGAAAATCCCAAAGTCCTCTCTGCTGC...GGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CAA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCAAAGCCAACCAGTCACTaGCAGCAGACGAGTCTGTCA +
Preference number: 5 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPKPTSH*QQTSLS
Trigger: TGACAGACTCGTCTGCTGCAAGTGACTGGTTGGCTT...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CAA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCAGTGACCTTGAGTATTaGGTGAAGATTTTGTCCTTT +
Preference number: 5 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVASDLEY*VKILSF
Trigger: AAAGGACAAAATCTTCACCAAATACTCAAGGTCACT...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CAA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGAAACTGGAATCAGATTaGGCACCTGGGAGGAATCTG +
Preference number: 5 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMKLESD*APGRNL
Trigger: CAGATTCCTCCCAGGTGCCAAATCTGATTCCAGTTT...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CAA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCATCCCATTGGACTTCCTaGCCCACCGAAAGAGAAGGT +
Preference number: 5 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPSHWTS*PTEREG
Trigger: ACCTTCTCTTTCGGTGGGCAAGGAAGTCCAATGGGA...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp TCAGTTGTATTGACCGTTAAGGAAGGAACTAGAGAAAATAGTTCACTCAGTGTCGGCTGCTGGAGTAGCTaGATCAGGCTTGGTGCATTC +
Preference number: 5 (lower is better)
Translates to: SVVLTVKEGTRENSSLSVGCWSS*IRLGAF
Trigger: GAATGCACCAAGCCTGATCAAGCTACTCCAGCAGCC...GACACTGAGTGAACTATTTTCTCTAGTTCCTTCCTTAACGGTCAATACAACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603648.1
CDS-3UTR CAA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCTCATATTCAGTTGTATaGACCGTTAAGGAAGGAACT +
Preference number: 5 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVASYSVV*TVKEGT
Trigger: AGTTCCTTCCTTAACGGTCAATACAACTGAATATGA...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp GTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCACTCCTCTCTTCAGCATTTGCTACAATaGGGTCCTTGTTTTGAGTAT +
Preference number: 5 (lower is better)
Translates to: VPVSVSTGPGTKAMHSSLQHLLQ*GPCFEY
Trigger: ATACTCAAAACAAGGACCCAATTGTAGCAAATGCTG...AAGAGAGGAGTGCATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGAAGTTGCCCTCTGGGTaGGTAATGGCTATCCACAAT +
Preference number: 5 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMKLPSG*VMAIHN
Trigger: ATTGTGGATAGCCATTACCAACCCAGAGGGCAACTT...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCAGTGGATTTGCACGGCTaGAGACTCATCAGCACTTGG +
Preference number: 5 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPVDLHG*RLISTW
Trigger: CCAAGTGCTGATGAGTCTCAAGCCGTGCAAATCCAC...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCAAAGGCCCATGTGGATTaGCACGGCTTGAGACTCATC +
Preference number: 5 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPKAHVD*HGLRLI
Trigger: GATGAGTCTCAAGCCGTGCAAATCCACATGGGCCTT...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCTTCTCCGAATCTTATTaGGCAGGAGGTCAAAAATTT +
Preference number: 5 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAFSESY*AGGQKF
Trigger: AAATTTTTGACCTCCTGCCAAATAAGATTCGGAGAA...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGGCAGCTTTTTCTATGTaGCTCTTAGTAACCTGGGCG +
Preference number: 5 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMAAFSM*LLVTWA
Trigger: CGCCCAGGTTACTAAGAGCAACATAGAAAAAGCTGC...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AAGCAATGCACTCCTCTCTTAGGAGGCATGTGTCAAGCTGTCAGTGATGTGGCCTATTGTGAAAGGATGTaGACTGGTAAGCAACATTTC +
Preference number: 5 (lower is better)
Translates to: KQCTPLLGGMCQAVSDVAYCERM*TGKQHF
Trigger: GAAATGTTGCTTACCAGTCAACATCCTTTCACAATA...GGCCACATCACTGACAGCTTGACACATGCCTCCTAAGAGAGGAGTGCATTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGTTCGAACCACTACATaGTCACTGCAACACTTCTCC +
Preference number: 5 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPVRTTT*SLQHFS
Trigger: GGAGAAGTGTTGCAGTGACAATGTAGTGGTTCGAAC...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CAA 90 bp GAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCAAACTGGAATCAGATTaGGCACCTGGGAGGAATCTG +
Preference number: 5 (lower is better)
Translates to: ELKPNKENPSSCFSLNWPKLESD*APGRNL
Trigger: CAGATTCCTCCCAGGTGCCAAATCTGATTCCAGTTT...GGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CAA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGCATATCTGCACCATGTaGATATGGCCTCTGCTTACA +
Preference number: 5 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMHICTM*IWPLLT
Trigger: TGTAAGCAGAGGCCATATCAACATGGTGCAGATATG...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATAGGCTGCTGGAGTAGCTaGATCAGGCTTGGTGCATTC +
Preference number: 5 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLIGCWSS*IRLGAF
Trigger: GAATGCACCAAGCCTGATCAAGCTACTCCAGCAGCC...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGCCTGTGGAAGAAAAATaGCACGGTGCCACTCTGAAA +
Preference number: 5 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPPVEEK*HGATLK
Trigger: TTTCAGAGTGGCACCGTGCAATTTTTCTTCCACAGG...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAAAACGCGGGACTGCATTaGGCTGCTGTGGCTCATGAG +
Preference number: 5 (lower is better)
Translates to: SREKIISSSFHKENLHIENAGLH*AAVAHE
Trigger: CTCATGAGCCACAGCAGCCAAATGCAGTCCCGCGTT...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCCAGGCAGGGAGTAGTTaGCTGCCCAAGTCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVQAGSS*LPKSSA
Trigger: AGCTGAAGACTTGGGCAGCAAACTACTCCCTGCCTG...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCAACCTGGGCGATCCGATaGGCATCATCATCTGTCATT +
Preference number: 5 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPTWAIR*ASSSVI
Trigger: AATGACAGATGATGATGCCAATCGGATCGCCCAGGT...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS TCA 90 bp ATCTGCACCATGTTGATATGGCCTCTGCTTACATATATCTCTGATTaGTGCTGCTTTTGCAATCAGTTTCTCCCATTGGACTTCCTTGCC +
Preference number: 5 (lower is better)
Translates to: ICTMLIWPLLTYISD*CCFCNQFLPLDFLA
Trigger: GGCAAGGAAGTCCAATGGGAGAAACTGATTGCAAAAGCAGCATCAATCAGAGATATATGTAAGCAGAGGCCATATCAACATGGTGCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000603492.1
ENST00000605086.5
CDS GCA 90 bp TCATCCACAGATATACAGTCTTCCAAGGCAGTAGAAGATAGTATCTaGAGAATTGGCATCACTAGCAGCAGAGAGGACTTTGGGATTTTC +
Preference number: 5 (lower is better)
Translates to: SSTDIQSSKAVEDSI*RIGITSSREDFGIF
Trigger: GAAAATCCCAAAGTCCTCTCTGCTGCTAGTGATGCCAATTCTGCAGATACTATCTTCTACTGCCTTGGAAGACTGTATATCTGTGGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS GCA 90 bp AAGAATGGTGTGTTCTCCTGCACTAAAGTTGGCCAGGGATCTATATaGAGCATTTGCTACAATTGGGTCCTTGTTTTGAGTATGAGTCCA +
Preference number: 5 (lower is better)
Translates to: KNGVFSCTKVGQGSI*SICYNWVLVLSMSP
Trigger: TGGACTCATACTCAAAACAAGGACCCAATTGTAGCAAATGCTGCATATAGATCCCTGGCCAACTTTAGTGCAGGAGAACACACCATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCAGTTCGAACCACTACATaGTCACTGCAACACTTCTCC +
Preference number: 5 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPVRTTT*SLQHFS
Trigger: GGAGAAGTGTTGCAGTGACAATGTAGTGGTTCGAAC...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CAA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGGTTGATGGAATCAAGTaGAGTATCCCATTGAGAACA +
Preference number: 5 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGVDGIK*SIPLRT
Trigger: TGTTCTCAATGGGATACTCAACTTGATTCCATCAAC...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CAA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGATTCTTTTCCCCACCTaGTCCTTCCTTAAGAGCTTG +
Preference number: 5 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPILFPT*SFLKSL
Trigger: CAAGCTCTTAAGGAAGGACAAGGTGGGGAAAAGAAT...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CAA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGTATGTCACAACACAGTaGAAGTATCTGCTGTTCCAG +
Preference number: 5 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMYVTTQ*KYLLFQ
Trigger: CTGGAACAGCAGATACTTCAACTGTGTTGTGACATA...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CAA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAAGGCTGCTGGAGTAGCTaGATCAGGCTTGGTGCATTC +
Preference number: 5 (lower is better)
Translates to: SREKIISSSFHKENLHIEGCWSS*IRLGAF
Trigger: GAATGCACCAAGCCTGATCAAGCTACTCCAGCAGCC...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCATCTCCTGCACTAAAGTaGGCCAGGGATCTATATGCA +
Preference number: 5 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPSPALK*ARDLYA
Trigger: TGCATATAGATCCCTGGCCAACTTTAGTGCAGGAGA...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGAGGTTTCAGTCCTGGTaGCTTGTTTGTTTCATACAT +
Preference number: 5 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGRFQSW*LVCFIH
Trigger: ATGTATGAAACAAACAAGCAACCAGGACTGAAACCT...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATAGCAAGTGAAGTCTGCTaGAAACTTCGCCCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLIASEVC*KLRPLL
Trigger: CAGCAGAGGGCGAAGTTTCAAGCAGACTTCACTTGC...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCAGAGCTAACAGCGCATaGCCTTTCACTACCGGACTC +
Preference number: 5 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVRANSA*PFTTGL
Trigger: GAGTCCGGTAGTGAAAGGCAATGCGCTGTTAGCTCT...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGAAGAAGGTTCATCTCTaGGCCAGATATATCACTGAG +
Preference number: 5 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMKKVHL*ARYITE
Trigger: CTCAGTGATATATCTGGCCAAGAGATGAACCTTCTT...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGAATATACAGCCCGTGTaGTATTCAAGACTAGTGTCA +
Preference number: 5 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGNIQPV*YSRLVS
Trigger: TGACACTAGTCTTGAATACAACACGGGCTGTATATT...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGGAGACTAAGTACAGTTaGACAAAGGCAGCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGETKYS*TKAAFS
Trigger: AGAAAAAGCTGCCTTTGTCAAACTGTACTTAGTCTC...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGATGCAACCACTGCGGTaGCAAATATCAGCAAGAAGA +
Preference number: 5 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPMQPLR*QISARR
Trigger: TCTTCTTGCTGATATTTGCAACCGCAGTGGTTGCAT...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS TCA 90 bp TGCAGAATTGGCATCACTAGCAGCAGAGAGGACTTTGGGATTTTCTaGTCCTCAGTAACAGAGAGGAGCTTCAAAGCTAGATTTAAGATT +
Preference number: 5 (lower is better)
Translates to: CRIGITSSREDFGIF*SSVTERSFKARFKI
Trigger: AATCTTAAATCTAGCTTTGAAGCTCCTCTCTGTTACTGAGGATCAGAAAATCCCAAAGTCCTCTCTGCTGCTAGTGATGCCAATTCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS GCA 90 bp AAAACCCAGGATCTGTTCATCAGAGATGTGTTTTATCCACAGAGGTaGAGATATCAGGAGATATCTCTTGGTATTCAGACTCAGACTGTG +
Preference number: 5 (lower is better)
Translates to: KTQDLFIRDVFYPQR*RYQEISLGIQTQTV
Trigger: CACAGTCTGAGTCTGAATACCAAGAGATATCTCCTGATATCTGCACCTCTGTGGATAAAACACATCTCTGATGAACAGATCCTGGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS CCA 90 bp AGTCTGCTTGAAACTTCGCCCTCTGCTGGCCATCAGTCTGTTCAATaGTTTTCCATCTTTACTCTGATACATGGAAACATCATAGCAAAA +
Preference number: 5 (lower is better)
Translates to: SLLETSPSAGHQSVQ*FSIFTLIHGNIIAK
Trigger: TTTTGCTATGATGTTTCCATGTATCAGAGTAAAGATGGAAAACCATTGAACAGACTGATGGCCAGCAGAGGGCGAAGTTTCAAGCAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
ENST00000605852.1
CDS-3UTR CAA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGGTTGATGGAATCAAGTaGAGTATCCCATTGAGAACA +
Preference number: 5 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMVDGIK*SIPLRT
Trigger: TGTTCTCAATGGGATACTCAACTTGATTCCATCAAC...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CAA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGTCTGCTGTTCCAGTATaGATGGTTGATCTTTGTCAC +
Preference number: 5 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPSAVPV*MVDLCH
Trigger: GTGACAAAGATCAACCATCAATACTGGAACAGCAGA...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CAA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTGTAGGAGAGCTTTaGGTGGTCATCTCTGTAACA +
Preference number: 5 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPLVGEL*VVISVT
Trigger: TGTTACAGAGATGACCACCAAAAGCTCTCCTACAAG...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CAA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAAAAGCCAACCAGTCACTaGCAGCAGACGAGTCTGTCA +
Preference number: 5 (lower is better)
Translates to: SREKIISSSFHKENLHIEKPTSH*QQTSLS
Trigger: TGACAGACTCGTCTGCTGCAAGTGACTGGTTGGCTT...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CAA 90 bp AAGTATCTTCTAAGCCTGTCTCAGTCAGATGATCTCATATTCAGTTGTATTGACAATCAGTTTCTCCCATaGGACTTCCTTGCCCACCGA +
Preference number: 5 (lower is better)
Translates to: KYLLSLSQSDDLIFSCIDNQFLP*DFLAHR
Trigger: TCGGTGGGCAAGGAAGTCCAATGGGAGAAACTGATT...GTCAATACAACTGAATATGAGATCATCTGACTGAGACAGGCTTAGAAGATACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603648.1
CDS-3UTR CAA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACATATCTGCACCATGTaGATATGGCCTCTGCTTACA +
Preference number: 5 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPHICTM*IWPLLT
Trigger: TGTAAGCAGAGGCCATATCAACATGGTGCAGATATG...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTCATATTCAGTTGTATaGACCGTTAAGGAAGGAACT +
Preference number: 5 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGSYSVV*TVKEGT
Trigger: AGTTCCTTCCTTAACGGTCAATACAACTGAATATGA...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTTCAGTCCTGGTTGCTaGTTTGTTTCATACATTTTC +
Preference number: 5 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGFSPGC*FVSYIF
Trigger: GAAAATGTATGAAACAAACAAGCAACCAGGACTGAA...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATAAAACCAGGAGAGAAGTaGCCCTCTGGGTTGGTAATG +
Preference number: 5 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLIKPGEK*PSGLVM
Trigger: CATTACCAACCCAGAGGGCAACTTCTCTCCTGGTTT...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCGTGGATTTGCACGGCTaGAGACTCATCAGCACTTGG +
Preference number: 5 (lower is better)
Translates to: ENLHIELKPNKENPSSCFVDLHG*RLISTW
Trigger: CCAAGTGCTGATGAGTCTCAAGCCGTGCAAATCCAC...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAAGGCCCATGTGGATTaGCACGGCTTGAGACTCATC +
Preference number: 5 (lower is better)
Translates to: ENLHIELKPNKENPSSCFKAHVD*HGLRLI
Trigger: GATGAGTCTCAAGCCGTGCAAATCCACATGGGCCTT...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAAAAGGCCCATGTGGATTaGCACGGCTTGAGACTCATC +
Preference number: 5 (lower is better)
Translates to: SREKIISSSFHKENLHIEKAHVD*HGLRLI
Trigger: GATGAGTCTCAAGCCGTGCAAATCCACATGGGCCTT...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGAAGAAGGTTCATCTCTaGGCCAGATATATCACTGAG +
Preference number: 5 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPKKVHL*ARYITE
Trigger: CTCAGTGATATATCTGGCCAAGAGATGAACCTTCTT...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCGAAGCCAGACTGCATTaGACTGGAGACCAATCACCC +
Preference number: 5 (lower is better)
Translates to: ENLHIELKPNKENPSSCFEARLH*TGDQSP
Trigger: GGGTGATTGGTCTCCAGTCAAATGCAGTCTGGCTTC...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp GAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCAGCTTTCTCCAACAGTaGCTATGGGTTTCATCACTA +
Preference number: 5 (lower is better)
Translates to: ELKPNKENPSSCFSLNWPSFLQQ*LWVSSL
Trigger: TAGTGATGAAACCCATAGCAACTGTTGGAGAAAGCT...GGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCAGTTCACAGGAGGATATaGGTAGCTTTCTCCAACAGT +
Preference number: 5 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPVHRRI*VAFSNS
Trigger: ACTGTTGGAGAAAGCTACCAATATCCTCCTGTGAAC...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAAGACCGTGTAAAGCACTaGGGCATAGCTCAGGACTTC +
Preference number: 5 (lower is better)
Translates to: SREKIISSSFHKENLHIEDRVKH*GIAQDF
Trigger: GAAGTCCTGAGCTATGCCCAAGTGCTTTACACGGTC...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp CTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTTCTCCGAATCTTATTaGGCAGGAGGTCAAAAATTT +
Preference number: 5 (lower is better)
Translates to: LKPNKENPSSCFSLNWPGFSESY*AGGQKF
Trigger: AAATTTTTGACCTCCTGCCAAATAAGATTCGGAGAA...CCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATAACCTGGGCGATCCGATaGGCATCATCATCTGTCATT +
Preference number: 5 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLITWAIR*ASSSVI
Trigger: AATGACAGATGATGATGCCAATCGGATCGCCCAGGT...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATATTCAAAACGCCCGTATaGGCATGGCTCACAATCCGT +
Preference number: 5 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLIFKTPV*AWLTIR
Trigger: ACGGATTGTGAGCCATGCCAATACGGGCGTTTTGAA...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCAATGCAACCACTGCGGTaGCAAATATCAGCAAGAAGA +
Preference number: 5 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPMQPLR*QISARR
Trigger: TCTTCTTGCTGATATTTGCAACCGCAGTGGTTGCAT...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS TCA 90 bp GCTGACTTGCTGGAGTCTGTAGAAGTAGTAAAGCTATTCCAATTATaGCCAGTTCAACAGGAAAATCCTCCTTCAGAAGTTCAACACTGT +
Preference number: 5 (lower is better)
Translates to: ADLLESVEVVKLFQL*PVQQENPPSEVQHC
Trigger: ACAGTGTTGAACTTCTGAAGGAGGATTTTCCTGTTGAACTGGTCATAATTGGAATAGCTTTACTACTTCTACAGACTCCAGCAAGTCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS TCA 90 bp GAAGAAGTCCAAAGCCTTGTCAAGAGCCGTATTGTGAAAGGATGTTaGCTGGTAAGCAACATTTCTAATATAACCCATCAGTTCCAAGAG +
Preference number: 5 (lower is better)
Translates to: EEVQSLVKSRIVKGC*LVSNISNITHQFQE
Trigger: CTCTTGGAACTGATGGGTTATATTAGAAATGTTGCTTACCAGTCAACATCCTTTCACAATACGGCTCTTGACAAGGCTTTGGACTTCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS TCA 90 bp GCAGCTTCATTTTCAACTGCTAATCTGTGTGGATGGAAATTTCCTTaGTGGTCAATTAAGAATGGAGTTAGTTGCAGGGAGGAGCAAAGA +
Preference number: 5 (lower is better)
Translates to: AASFSTANLCGWKFP*WSIKNGVSCREEQR
Trigger: TCTTTGCTCCTCCCTGCAACTAACTCCATTCTTAATTGACCATCAAGGAAATTTCCATCCACACAGATTAGCAGTTGAAAATGAAGCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380249.5
CDS TCA 90 bp GGCAATGTGCTGAGCTCCAAATGCATACCTCATATTCAGTTGTATTaGCCGTTAAGGAAGGAACTAGAGAAAATAGTTCACTCAGTGTCT +
Preference number: 5 (lower is better)
Translates to: GNVLSSKCIPHIQLY*PLRKELEKIVHSVS
Trigger: AGACACTGAGTGAACTATTTTCTCTAGTTCCTTCCTTAACGGTCAATACAACTGAATATGAGGTATGCATTTGGAGCTCAGCACATTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603844.1
CDS-3UTR CAA 90 bp GAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGCTCTAAAAGGTGAATaGAAGATGAACATTCACCAG +
Preference number: 5 (lower is better)
Translates to: ELKPNKENPSSCFSLNWPALKGE*KMNIHQ
Trigger: CTGGTGAATGTTCATCTTCAATTCACCTTTTAGAGC...GGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CAA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCAAAGCTAGATTTAAGATaGGCTTCTGCTGACTTGCTG +
Preference number: 5 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPKLDLR*ASADLL
Trigger: CAGCAAGTCAGCAGAAGCCAATCTTAAATCTAGCTT...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CAA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGAGTGACCTTGAGTATTaGGTGAAGATTTTGTCCTTT +
Preference number: 5 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMSDLEY*VKILSF
Trigger: AAAGGACAAAATCTTCACCAAATACTCAAGGTCACT...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CAA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAATCAGTTTCTCCCATaGGACTTCCTTGCCCACCGA +
Preference number: 5 (lower is better)
Translates to: ENLHIELKPNKENPSSCFNQFLP*DFLAHR
Trigger: TCGGTGGGCAAGGAAGTCCAATGGGAGAAACTGATT...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp GAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGCATTCATTCAACACTaGAGAAATAGCTGCCAACAT +
Preference number: 5 (lower is better)
Translates to: ELKPNKENPSSCFSLNWPAFIQH*RNSCQH
Trigger: ATGTTGGCAGCTATTTCTCAAGTGTTGAATGAATGC...GGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGATCTATATGCAGCATTaGCTACAATTGGGTCCTTGT +
Preference number: 5 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPIYMQH*LQLGPC
Trigger: ACAAGGACCCAATTGTAGCAAATGCTGCATATAGAT...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp GAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCATCTATATGCAGCATTaGCTACAATTGGGTCCTTGT +
Preference number: 5 (lower is better)
Translates to: ELKPNKENPSSCFSLNWPIYMQH*LQLGPC
Trigger: ACAAGGACCCAATTGTAGCAAATGCTGCATATAGAT...GGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGAGGTTTCAGTCCTGGTaGCTTGTTTGTTTCATACAT +
Preference number: 5 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPRFQSW*LVCFIH
Trigger: ATGTATGAAACAAACAAGCAACCAGGACTGAAACCT...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATACCTGTGGAAGAAAAATaGCACGGTGCCACTCTGAAA +
Preference number: 5 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLIPVEEK*HGATLK
Trigger: TTTCAGAGTGGCACCGTGCAATTTTTCTTCCACAGG...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGGGTACTAAAGCAATGTATTGTGAAAGGATGTaGACTGGTAAGCAACATTTC +
Preference number: 5 (lower is better)
Translates to: KKIQVPVSVSTGPGTKAMYCERM*TGKQHF
Trigger: GAAATGTTGCTTACCAGTCAACATCCTTTCACAATA...CATTGCTTTAGTACCCGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS TCA 90 bp AAGACTTTCAGCAGGGCTAGTCGGAGTTTAGCATATTCTTGTAACTaGGATGGTTCACAATACAGATACCACAGAAATGGTGCCATTATT +
Preference number: 5 (lower is better)
Translates to: KTFSRASRSLAYSCN*DGSQYRYHRNGAII
Trigger: AATAATGGCACCATTTCTGTGGTATCTGTATTGTGAACCATCTCAGTTACAAGAATATGCTAAACTCCGACTAGCCCTGCTGAAAGTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000604103.1
ENST00000605031.5
CDS TCA 90 bp GATTGGCATCATCATCTGTCATTTCTAAGAGGCATTTTGCTATGCTaGTATACAGCTCTAGATCCTTTCTCCGAATCTTATTTGGCAGGA +
Preference number: 5 (lower is better)
Translates to: DWHHHLSFLRGILLC*YTALDPFSESYLAG
Trigger: TCCTGCCAAATAAGATTCGGAGAAAGGATCTAGAGCTGTATATCAGCATAGCAAAATGCCTCTTAGAAATGACAGATGATGATGCCAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCAACTGGCCCGACATCATCGCCTCTGTaGTCTGTATCAAATCTTTTA +
Preference number: 5 (lower is better)
Translates to: NSSQIKKIQVPVSVSTGPTSSPL*SVSNLL
Trigger: TAAAAGATTTGATACAGACAACAGAGGCGATGATGT...CGGGCCAGTTGAGACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CAA 90 bp TCTCTGCATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCAATCTATATGCAGCATTaGCTACAATTGGGTCCTTGT +
Preference number: 5 (lower is better)
Translates to: SLHHVSAIPGMNSEKLLPIYMQH*LQLGPC
Trigger: ACAAGGACCCAATTGTAGCAAATGCTGCATATAGAT...TGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATGCAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCTCTCCTGCACTAAAGTaGGCCAGGGATCTATATGCA +
Preference number: 5 (lower is better)
Translates to: ENLHIELKPNKENPSSCFSPALK*ARDLYA
Trigger: TGCATATAGATCCCTGGCCAACTTTAGTGCAGGAGA...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCCCTGTGGAAGAAAAATaGCACGGTGCCACTCTGAAA +
Preference number: 5 (lower is better)
Translates to: ENLHIELKPNKENPSSCFPVEEK*HGATLK
Trigger: TTTCAGAGTGGCACCGTGCAATTTTTCTTCCACAGG...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCACTAACAGTCGAAGCTaGTTCATAACATCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVTNSRS*FITSSA
Trigger: GGCTGAGGATGTTATGAACAAGCTTCGACTGTTAGT...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATAACTAACAGTCGAAGCTaGTTCATAACATCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLITNSRS*FITSSA
Trigger: GGCTGAGGATGTTATGAACAAGCTTCGACTGTTAGT...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCGTTCACAGGAGGATATaGGTAGCTTTCTCCAACAGT +
Preference number: 5 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVVHRRI*VAFSNS
Trigger: ACTGTTGGAGAAAGCTACCAATATCCTCCTGTGAAC...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCTGCTGTTCCAGTATaGATGGTTGATCTTTGTCAC +
Preference number: 5 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVSAVPV*MVDLCH
Trigger: GTGACAAAGATCAACCATCAATACTGGAACAGCAGA...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CAA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCCTTGTAGGAGAGCTTTaGGTGGTCATCTCTGTAACA +
Preference number: 5 (lower is better)
Translates to: ENLHIELKPNKENPSSCFLVGEL*VVISVT
Trigger: TGTTACAGAGATGACCACCAAAAGCTCTCCTACAAG...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CAA 90 bp TCAGTTGTATTGACCGTTAAGGAAGGAACTAGAGAAAATAGTTCACTCAGTGTCGCATTCATTCAACACTaGAGAAATAGCTGCCAACAT +
Preference number: 5 (lower is better)
Translates to: SVVLTVKEGTRENSSLSVAFIQH*RNSCQH
Trigger: ATGTTGGCAGCTATTTCTCAAGTGTTGAATGAATGC...GACACTGAGTGAACTATTTTCTCTAGTTCCTTCCTTAACGGTCAATACAACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603648.1
CDS-3UTR CAA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCACTAACAGTCGAAGCTaGTTCATAACATCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: ENLHIELKPNKENPSSCFTNSRS*FITSSA
Trigger: GGCTGAGGATGTTATGAACAAGCTTCGACTGTTAGT...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAAGTTCACAGGAGGATATaGGTAGCTTTCTCCAACAGT +
Preference number: 5 (lower is better)
Translates to: SREKIISSSFHKENLHIEVHRRI*VAFSNS
Trigger: ACTGTTGGAGAAAGCTACCAATATCCTCCTGTGAAC...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATAAATTTCAAGGCACAGTaGCTGGATCTCTTCACCAAA +
Preference number: 5 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLINFKAQ*LDLFTK
Trigger: TTTGGTGAAGAGATCCAGCAACTGTGCCTTGAAATT...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp TCAGTTGTATTGACCGTTAAGGAAGGAACTAGAGAAAATAGTTCACTCAGTGTCCATATCTGCACCATGTaGATATGGCATATATCTCTG +
Preference number: 5 (lower is better)
Translates to: SVVLTVKEGTRENSSLSVHICTM*IWHISL
Trigger: CAGAGATATATGCCATATCAACATGGTGCAGATATG...GACACTGAGTGAACTATTTTCTCTAGTTCCTTCCTTAACGGTCAATACAACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603648.1
CDS TCA 90 bp TTTAAGAAGGGAAGGAGGCACAGATTCAGGACCTATAACAGACAGTaGAAAATAATAGTAAAACACCTGCATACTATCATGGAAGTGGAA +
Preference number: 5 (lower is better)
Translates to: FKKGRRHRFRTYNRQ*KIIVKHLHTIMEVE
Trigger: TTCCACTTCCATGATAGTATGCAGGTGTTTTACTATTATTTTTCACTGTCTGTTATAGGTCCTGAATCTGTGCCTCCTTCCCTTCTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603631.1
CDS-3UTR CAA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATAGCTCTAAAAGGTGAATaGAAGATGAACATTCACCAG +
Preference number: 5 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLIALKGE*KMNIHQ
Trigger: CTGGTGAATGTTCATCTTCAATTCACCTTTTAGAGC...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS-3UTR CAA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATAGCATTCATTCAACACTaGAGAAATAGCTGCCAACAT +
Preference number: 5 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLIAFIQH*RNSCQH
Trigger: ATGTTGGCAGCTATTTCTCAAGTGTTGAATGAATGC...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp TCAGTTGTATTGACCGTTAAGGAAGGAACTAGAGAAAATAGTTCACTCAGTGTCTCATATTCAGTTGTATaGACCGTTAAGGAAGGAACT +
Preference number: 5 (lower is better)
Translates to: SVVLTVKEGTRENSSLSVSYSVV*TVKEGT
Trigger: AGTTCCTTCCTTAACGGTCAATACAACTGAATATGA...GACACTGAGTGAACTATTTTCTCTAGTTCCTTCCTTAACGGTCAATACAACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603648.1
CDS-3UTR CAA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCAGGTTTCAGTCCTGGTaGCTTGTTTGTTTCATACAT +
Preference number: 5 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVRFQSW*LVCFIH
Trigger: ATGTATGAAACAAACAAGCAACCAGGACTGAAACCT...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAAGAAGGTTCATCTCTaGGCCAGATATATCACTGAG +
Preference number: 5 (lower is better)
Translates to: ENLHIELKPNKENPSSCFKKVHL*ARYITE
Trigger: CTCAGTGATATATCTGGCCAAGAGATGAACCTTCTT...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATAAATATACAGCCCGTGTaGTATTCAAGACTAGTGTCA +
Preference number: 5 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLINIQPV*YSRLVS
Trigger: TGACACTAGTCTTGAATACAACACGGGCTGTATATT...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAAAATTTCAAGGCACAGTaGCTGGATCTCTTCACCAAA +
Preference number: 5 (lower is better)
Translates to: SREKIISSSFHKENLHIENFKAQ*LDLFTK
Trigger: TTTGGTGAAGAGATCCAGCAACTGTGCCTTGAAATT...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATAGAGACTAAGTACAGTTaGACAAAGGCAGCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLIETKYS*TKAAFS
Trigger: AGAAAAAGCTGCCTTTGTCAAACTGTACTTAGTCTC...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAACAGCATTTGCTACAATaGGGTCCTTGTTTTGAGTAT +
Preference number: 5 (lower is better)
Translates to: SREKIISSSFHKENLHIEQHLLQ*GPCFEY
Trigger: ATACTCAAAACAAGGACCCAATTGTAGCAAATGCTG...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTTCAGTCCTGGTTGCTaGTTTGTTTCATACATTTTC +
Preference number: 5 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVFSPGC*FVSYIF
Trigger: GAAAATGTATGAAACAAACAAGCAACCAGGACTGAA...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp ATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCAGTCTCCTCAACCTTCTCTTaGCAAGAGATAATGAAAACT +
Preference number: 5 (lower is better)
Translates to: ISTLNSSQIKKIQVPVSVSSTFS*QEIMKT
Trigger: AGTTTTCATTATCTCTTGCAAAGAGAAGGTTGAGGA...GACTGAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATATCCTCAACCTTCTCTTaGCAAGAGATAATGAAAACT +
Preference number: 5 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLISSTFS*QEIMKT
Trigger: AGTTTTCATTATCTCTTGCAAAGAGAAGGTTGAGGA...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAAAATATACAGCCCGTGTaGTATTCAAGACTAGTGTCA +
Preference number: 5 (lower is better)
Translates to: SREKIISSSFHKENLHIENIQPV*YSRLVS
Trigger: TGACACTAGTCTTGAATACAACACGGGCTGTATATT...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp CATCATGTCTCAGCAATACCAGGCATGAATTCTGAAAAACTTCTTCCACTTATATTCTCCGAATCTTATTaGGCAGGAGGTCAAAAATTT +
Preference number: 5 (lower is better)
Translates to: HHVSAIPGMNSEKLLPLIFSESY*AGGQKF
Trigger: AAATTTTTGACCTCCTGCCAAATAAGATTCGGAGAA...TATAAGTGGAAGAAGTTTTTCAGAATTCATGCCTGGTATTGCTGAGACATGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCGAGACTAAGTACAGTTaGACAAAGGCAGCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: ENLHIELKPNKENPSSCFETKYS*TKAAFS
Trigger: AGAAAAAGCTGCCTTTGTCAAACTGTACTTAGTCTC...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAATCATATTCAGTTGTATaGACCGTTAAGGAAGGAACT +
Preference number: 5 (lower is better)
Translates to: SREKIISSSFHKENLHIESYSVV*TVKEGT
Trigger: AGTTCCTTCCTTAACGGTCAATACAACTGAATATGA...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp GAAAATCTCCACATTGAACTCAAGCCAAATAAAGAAAATCCAAGTTCCTGTTTCTTCAGTCCTGGTTGCTaGTTTGTTTCATACATTTTC +
Preference number: 5 (lower is better)
Translates to: ENLHIELKPNKENPSSCFFSPGC*FVSYIF
Trigger: GAAAATGTATGAAACAAACAAGCAACCAGGACTGAA...GAAACAGGAACTTGGATTTTCTTTATTTGGCTTGAGTTCAATGTGGAGATTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAATCCTCAACCTTCTCTTaGCAAGAGATAATGAAAACT +
Preference number: 5 (lower is better)
Translates to: SREKIISSSFHKENLHIESSTFS*QEIMKT
Trigger: AGTTTTCATTATCTCTTGCAAAGAGAAGGTTGAGGA...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS-3UTR CAA 90 bp AGCAGGGAGAAGATAATATCTTCAAGCTTTCACAAAGAAAATCTCCACATTGAATATTGTGAAAGGATGTaGACTGGTAAGCAACATTTC +
Preference number: 5 (lower is better)
Translates to: SREKIISSSFHKENLHIEYCERM*TGKQHF
Trigger: GAAATGTTGCTTACCAGTCAACATCCTTTCACAATA...TTCAATGTGGAGATTTTCTTTGTGAAAGCTTGAAGATATTATCTTCTCCCTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS TCA 72 bp CCCTTCTGCCACAAGCTCAGCCCAGCGCCGGCTGCCTaGCGTGGCCCGCCCCGCCGCCTCGAACGCCCGGGG +
Preference number: 6 (lower is better)
Translates to: PFCHKLSPAPAA*RGPPRRLERPG
Trigger: CCCCGGGCGTTCGAGGCGGCGGGGCGGGCCACGTCAGGCAGCCGGCGCTGGGCTGAGCTTGTGGCAGAAGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604036.1
CDS GCA 72 bp TTCTCCCTTCTGCCACAAGCTCAGCCCAGCGCCGGCTaGCTGACGTGGCCCGCCCCGCCGCCTCGAACGCCC +
Preference number: 6 (lower is better)
Translates to: FSLLPQAQPSAG*LTWPAPPPRTP
Trigger: GGGCGTTCGAGGCGGCGGGGCGGGCCACGTCAGGCAGCCGGCGCTGGGCTGAGCTTGTGGCAGAAGGGAGAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604036.1
CDS TCA 72 bp GCCCACGGAGTCTCACTGATTGCTAGCACAGCAGTCTaGGATCAACCTGCAAGGCGGCAGCGAGGCTGCGGG +
Preference number: 6 (lower is better)
Translates to: AHGVSLIASTAV*DQPARRQRGCG
Trigger: CCCGCAGCCTCGCTGCCGCCTTGCAGGTTGATCTCAGACTGCTGTGCTAGCAATCAGTGAGACTCCGTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380249.5
CDS TCA 72 bp ACGTGCGCAGACAGCTTCCGGAGCAATGCTGCTACGTaGACGCGGGACTGCATTTGGCTGCTGTGGCTCATG +
Preference number: 6 (lower is better)
Translates to: TCADSFRSNAAT*TRDCIWLLWLM
Trigger: CATGAGCCACAGCAGCCAAATGCAGTCCCGCGTTCACGTAGCAGCATTGCTCCGGAAGCTGTCTGCGCACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000603044.5
ENST00000604254.5
ENST00000605086.5
CDS GCA 72 bp CCTAGGCTGTCACCTAGGCTGTCACCTAGGCTGGAATaGAGTGGCATGATCCCAGCTCCCTGCAACCTCCAC +
Preference number: 6 (lower is better)
Translates to: PRLSPRLSPRLE*SGMIPAPCNLH
Trigger: GTGGAGGTTGCAGGGAGCTGGGATCATGCCACTGCATTCCAGCCTAGGTGACAGCCTAGGTGACAGCCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604828.1
CDS GCA 72 bp GTCATCTACGTGCGCAGACAGCTTCCGGAGCAATGCTaGTACGTGAACGCGGGACTGCATTTGGCTGCTGTG +
Preference number: 6 (lower is better)
Translates to: VIYVRRQLPEQC*YVNAGLHLAAV
Trigger: CACAGCAGCCAAATGCAGTCCCGCGTTCACGTAGCAGCATTGCTCCGGAAGCTGTCTGCGCACGTAGATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000603044.5
ENST00000604254.5
ENST00000605086.5
CDS GCA 72 bp GCTGTCATCTACGTGCGCAGACAGCTTCCGGAGCAATaGTGCTACGTGAACGCGGGACTGCATTTGGCTGCT +
Preference number: 6 (lower is better)
Translates to: AVIYVRRQLPEQ*CYVNAGLHLAA
Trigger: AGCAGCCAAATGCAGTCCCGCGTTCACGTAGCAGCATTGCTCCGGAAGCTGTCTGCGCACGTAGATGACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000603044.5
ENST00000604254.5
ENST00000605086.5
CDS CAA 72 bp CCGGAGCAATGCTGCTACGTGAACGCGGGACTGCATTaGGCTGCTGTGGCTCATGAGGGACAGAACAAGTCC +
Preference number: 6 (lower is better)
Translates to: PEQCCYVNAGLH*AAVAHEGQNKS
Trigger: GGACTTGTTCTGTCCCTCATGAGCCACAGCAGCCAAATGCAGTCCCGCGTTCACGTAGCAGCATTGCTCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000603044.5
ENST00000604254.5
ENST00000605086.5
CDS GCA 72 bp GGAAGGAGAGTGAGAACCTCCTGCAGAGTGACCCTGTaGATTGGACTCCTGCCAAGGAAGCTTGGTACTGGC +
Preference number: 6 (lower is better)
Translates to: GRRVRTSCRVTL*IGLLPRKLGTG
Trigger: GCCAGTACCAAGCTTCCTTGGCAGGAGTCCAATGCACAGGGTCACTCTGCAGGAGGTTCTCACTCTCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS CAA 90 bp AGACAGCTTCCGGAGCAATGCTGCTACGTGAACGCGGGACTGCATTaGGCTGCTGTGGCTCATGAGGGACAGAACAAGTCCAACTCCCAA +
Preference number: 6 (lower is better)
Translates to: RQLPEQCCYVNAGLH*AAVAHEGQNKSNSQ
Trigger: TTGGGAGTTGGACTTGTTCTGTCCCTCATGAGCCACAGCAGCCAAATGCAGTCCCGCGTTCACGTAGCAGCATTGCTCCGGAAGCTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000603044.5
ENST00000604254.5
ENST00000605086.5
CDS CAA 90 bp CGAGGAGGAGAGGGGCAGTGTGGTCAGCCCATGCAACCACTGCGGTaGCAAATATCAGCAAGAAGAAGTCCAAAGCCTTGTCAAGAGCCG +
Preference number: 6 (lower is better)
Translates to: RGGEGQCGQPMQPLR*QISARRSPKPCQEP
Trigger: CGGCTCTTGACAAGGCTTTGGACTTCTTCTTGCTGATATTTGCAACCGCAGTGGTTGCATGGGCTGACCACACTGCCCCTCTCCTCCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS GCA 72 bp CGACGACAGCAAGGCTGCTTAGAGCTAACAGCGCATTaGCTTTCACTACCGGACTCTCCTTTGCAGCTGCCT +
Preference number: 6 (lower is better)
Translates to: RRQQGCLELTAH*LSLPDSPLQLP
Trigger: AGGCAGCTGCAAAGGAGAGTCCGGTAGTGAAAGGCAATGCGCTGTTAGCTCTAAGCAGCCTTGCTGTCGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS CAA 72 bp ACGACGACAGCAAGGCTGCTTAGAGCTAACAGCGCATaGCCTTTCACTACCGGACTCTCCTTTGCAGCTGCC +
Preference number: 6 (lower is better)
Translates to: TTTARLLRANSA*PFTTGLSFAAA
Trigger: GGCAGCTGCAAAGGAGAGTCCGGTAGTGAAAGGCAATGCGCTGTTAGCTCTAAGCAGCCTTGCTGTCGTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS CAA 72 bp GCAGTTTCATGGCCTGGCTCAGACCGTGTAAAGCACTaGGGCATAGCTCAGGACTTCCAAGTGGGGAAGCTG +
Preference number: 6 (lower is better)
Translates to: AVSWPGSDRVKH*GIAQDFQVGKL
Trigger: CAGCTTCCCCACTTGGAAGTCCTGAGCTATGCCCAAGTGCTTTACACGGTCTGAGCCAGGCCATGAAACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS TCA 72 bp CGTGAACGCGGGACTGCATTTGGCTGCTGTGGCTCATaGGGGACAGAACAAGTCCAACTCCCAATATACAGC +
Preference number: 6 (lower is better)
Translates to: RERGTAFGCCGS*GTEQVQLPIYS
Trigger: GCTGTATATTGGGAGTTGGACTTGTTCTGTCCCTCATGAGCCACAGCAGCCAAATGCAGTCCCGCGTTCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000603044.5
ENST00000603695.1
ENST00000604254.5
ENST00000605086.5
CDS TCA 72 bp CCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTaGGCGATGGAGAAGACGGTGATTTCTGCATTTCCA +
Preference number: 6 (lower is better)
Translates to: PNRNSSGLQLPA*AMEKTVISAFP
Trigger: TGGAAATGCAGAAATCACCGTCTTCTCCATCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380249.5
CDS GCA 72 bp AGAATCATCCAGGCCAACACCTCTTTCTCACGGTGCTaGACAGCAACGCTCAGCATATCGGTCAGGTTCACC +
Preference number: 6 (lower is better)
Translates to: RIIQANTSFSRC*TATLSISVRFT
Trigger: GGTGAACCTGACCGATATGCTGAGCGTTGCTGTGCAGCACCGTGAGAAAGAGGTGTTGGCCTGGATGATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS GCA 72 bp TGCAGAATCATCCAGGCCAACACCTCTTTCTCACGGTaGTGCACAGCAACGCTCAGCATATCGGTCAGGTTC +
Preference number: 6 (lower is better)
Translates to: CRIIQANTSFSR*CTATLSISVRF
Trigger: GAACCTGACCGATATGCTGAGCGTTGCTGTGCAGCACCGTGAGAAAGAGGTGTTGGCCTGGATGATTCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS CAA 90 bp GTCTGTTCCTTCCATGGCTCTTTCTGCAGCAGCAGAGCCATGCTATaGGGAAGGAGAGTGAGAACCTCCTGCAGAGTGACCCTGTGCATT +
Preference number: 6 (lower is better)
Translates to: VCSFHGSFCSSRAML*GRRVRTSCRVTLCI
Trigger: AATGCACAGGGTCACTCTGCAGGAGGTTCTCACTCTCCTTCCCAATAGCATGGCTCTGCTGCTGCAGAAAGAGCCATGGAAGGAACAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS TCA 72 bp GAGGACACGGGAACCTACCTCATGTACAAGAGCAAGTaGAGTCTGCTTGAAACTTCGCCCTCTGCTGGCCAT +
Preference number: 6 (lower is better)
Translates to: EDTGTYLMYKSK*SLLETSPSAGH
Trigger: ATGGCCAGCAGAGGGCGAAGTTTCAAGCAGACTTCACTTGCTCTTGTACATGAGGTAGGTTCCCGTGTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603552.1
CDS GCA 72 bp AACATAGCTGAACTCTGCATGATCCTGAGCAACGAGTaGCACCAGACCTTCACAGCAGGCTGTTCGAACCAC +
Preference number: 6 (lower is better)
Translates to: NIAELCMILSNE*HQTFTAGCSNH
Trigger: GTGGTTCGAACAGCCTGCTGTGAAGGTCTGGTGGCACTCGTTGCTCAGGATCATGCAGAGTTCAGCTATGTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS GCA 72 bp TTGGCATGGCTCACAATCCGTGCCTGGTATAAGCTGTaGAGAATCATCCAGGCCAACACCTCTTTCTCACGG +
Preference number: 6 (lower is better)
Translates to: LAWLTIRAWYKL*RIIQANTSFSR
Trigger: CCGTGAGAAAGAGGTGTTGGCCTGGATGATTCTGCACAGCTTATACCAGGCACGGATTGTGAGCCATGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS GCA 72 bp AGGGGCAGTGTGGTCAGCCCATGCAACCACTGCGGTTaGAAATATCAGCAAGAAGAAGTCCAAAGCCTTGTC +
Preference number: 6 (lower is better)
Translates to: RGSVVSPCNHCG*KYQQEEVQSLV
Trigger: GACAAGGCTTTGGACTTCTTCTTGCTGATATTTGCAACCGCAGTGGTTGCATGGGCTGACCACACTGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS CCA 72 bp GGTGTCACCCACAAGCCCAATAGTGCAGCTGCATTCTaGGATGACTGTGCCTGGGTCACCATAATTTCAAGG +
Preference number: 6 (lower is better)
Translates to: GVTHKPNSAAAF*DDCAWVTIISR
Trigger: CCTTGAAATTATGGTGACCCAGGCACAGTCATCCCAGAATGCAGCTGCACTATTGGGCTTGTGGGTGACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000603631.1
ENST00000605086.5
CDS CCA 72 bp AAAACGCCCGTATTGGCATGGCTCACAATCCGTGCCTaGTATAAGCTGTGCAGAATCATCCAGGCCAACACC +
Preference number: 6 (lower is better)
Translates to: KTPVLAWLTIRA*YKLCRIIQANT
Trigger: GGTGTTGGCCTGGATGATTCTGCACAGCTTATACCAGGCACGGATTGTGAGCCATGCCAATACGGGCGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS CCA 72 bp TCTGCATTTCCATCTGAGATACCGAGTTCATCTCACTaGCTTGGAGAGTCCTACGCCCACGGAGTCTCACTG +
Preference number: 6 (lower is better)
Translates to: SAFPSEIPSSSH*LGESYAHGVSL
Trigger: CAGTGAGACTCCGTGGGCGTAGGACTCTCCAAGCCAGTGAGATGAACTCGGTATCTCAGATGGAAATGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380249.5
CDS CAA 72 bp GAGGGGCAGTGTGGTCAGCCCATGCAACCACTGCGGTaGCAAATATCAGCAAGAAGAAGTCCAAAGCCTTGT +
Preference number: 6 (lower is better)
Translates to: EGQCGQPMQPLR*QISARRSPKPC
Trigger: ACAAGGCTTTGGACTTCTTCTTGCTGATATTTGCAACCGCAGTGGTTGCATGGGCTGACCACACTGCCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS CAA 90 bp ACGAGTGCCACCAGACCTTCACAGCAGGCTGTTCGAACCACTACATaGTCACTGCAACACTTCTCCCACAGCAAGTTCAAAGCAGGAGTC +
Preference number: 6 (lower is better)
Translates to: TSATRPSQQAVRTTT*SLQHFSHSKFKAGV
Trigger: GACTCCTGCTTTGAACTTGCTGTGGGAGAAGTGTTGCAGTGACAATGTAGTGGTTCGAACAGCCTGCTGTGAAGGTCTGGTGGCACTCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS CAA 90 bp TGTCTAGATACGACGACAGCAAGGCTGCTTAGAGCTAACAGCGCATaGCCTTTCACTACCGGACTCTCCTTTGCAGCTGCCTTGGTGATC +
Preference number: 6 (lower is better)
Translates to: CLDTTTARLLRANSA*PFTTGLSFAAALVI
Trigger: GATCACCAAGGCAGCTGCAAAGGAGAGTCCGGTAGTGAAAGGCAATGCGCTGTTAGCTCTAAGCAGCCTTGCTGTCGTCGTATCTAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS CAA 90 bp AAGCAAGGCCCATGTGGATTTGCACGGCTTGAGACTCATCAGCACTaGGTTTCCCAGGTAACCTGGCAGTCAGCATGTTCAGGATTTCCT +
Preference number: 6 (lower is better)
Translates to: KQGPCGFARLETHQH*VSQVTWQSACSGFP
Trigger: AGGAAATCCTGAACATGCTGACTGCCAGGTTACCTGGGAAACCAAGTGCTGATGAGTCTCAAGCCGTGCAAATCCACATGGGCCTTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000603044.5
ENST00000603695.1
ENST00000605086.5
CDS TCA 72 bp ATCCCTAAAGCAAGGCCCATGTGGATTTGCACGGCTTaGGACTCATCAGCACTTGGTTTCCCAGGTAACCTG +
Preference number: 6 (lower is better)
Translates to: IPKARPMWICTA*DSSALGFPGNL
Trigger: CAGGTTACCTGGGAAACCAAGTGCTGATGAGTCTCAAGCCGTGCAAATCCACATGGGCCTTGCTTTAGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000603044.5
ENST00000603695.1
ENST00000605086.5
CDS TCA 72 bp CAGCAGGGTGGCTTTCAAAAGATCCCTGGACTGTGCTaGGAGGGCTTCTTTAGGGCTTTCCATGATGCTGAA +
Preference number: 6 (lower is better)
Translates to: QQGGFQKIPGLC*EGFFRAFHDAE
Trigger: TTCAGCATCATGGAAAGCCCTAAAGAAGCCCTCTCAGCACAGTCCAGGGATCTTTTGAAAGCCACCCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS GCA 72 bp AACCTTTCAGGGCACTGCTGGAAAAACGCTGTCAGCTaGTGCAAAAACACTGGCCAGCAATCAGGTCTGTGT +
Preference number: 6 (lower is better)
Translates to: NLSGHCWKNAVS*CKNTGQQSGLC
Trigger: ACACAGACCTGATTGCTGGCCAGTGTTTTTGCAGCAGCTGACAGCGTTTTTCCAGCAGTGCCCTGAAAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605031.5
CDS GCA 72 bp ATGAACTTCTGGGTCTGTTCCTTCCATGGCTCTTTCTaGAGCAGCAGAGCCATGCTATTGGGAAGGAGAGTG +
Preference number: 6 (lower is better)
Translates to: MNFWVCSFHGSF*SSRAMLLGRRV
Trigger: CACTCTCCTTCCCAATAGCATGGCTCTGCTGCTGCAGAAAGAGCCATGGAAGGAACAGACCCAGAAGTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS GCA 72 bp CTTCTTTCAGGGCACTGCTGGAAAAACGCTGTCAGCTaGTGCAAAAACACTGGCCAGCAATCAGGTCTGTGT +
Preference number: 6 (lower is better)
Translates to: LLSGHCWKNAVS*CKNTGQQSGLC
Trigger: ACACAGACCTGATTGCTGGCCAGTGTTTTTGCAGCAGCTGACAGCGTTTTTCCAGCAGTGCCCTGAAAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000604103.1
CDS CCA 72 bp CCCAATAGTGCAGCTGCATTCTGGGATGACTGTGCCTaGGTCACCATAATTTCAAGGCACAGTTGCTGGATC +
Preference number: 6 (lower is better)
Translates to: PNSAAAFWDDCA*VTIISRHSCWI
Trigger: GATCCAGCAACTGTGCCTTGAAATTATGGTGACCCAGGCACAGTCATCCCAGAATGCAGCTGCACTATTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000603631.1
ENST00000605086.5
CDS CAA 72 bp CCATGTGGATTTGCACGGCTTGAGACTCATCAGCACTaGGTTTCCCAGGTAACCTGGCAGTCAGCATGTTCA +
Preference number: 6 (lower is better)
Translates to: PCGFARLETHQH*VSQVTWQSACS
Trigger: TGAACATGCTGACTGCCAGGTTACCTGGGAAACCAAGTGCTGATGAGTCTCAAGCCGTGCAAATCCACATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000603044.5
ENST00000603695.1
ENST00000605086.5
CDS CAA 90 bp GGAGTGCCCTCTGTTAGAACAATTCTGATCCAGGCAGGGAGTAGTTaGCTGCCCAAGTCTTCAGCTTTTCCATGTCCACACACAGACAAT +
Preference number: 6 (lower is better)
Translates to: GVPSVRTILIQAGSS*LPKSSAFPCPHTDN
Trigger: ATTGTCTGTGTGTGGACATGGAAAAGCTGAAGACTTGGGCAGCAAACTACTCCCTGCCTGGATCAGAATTGTTCTAACAGAGGGCACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS TCA 72 bp AGCGATGGAGAAGACGGTGATTTCTGCATTTCCATCTaGGATACCGAGTTCATCTCACTGGCTTGGAGAGTC +
Preference number: 6 (lower is better)
Translates to: SDGEDGDFCISI*DTEFISLAWRV
Trigger: GACTCTCCAAGCCAGTGAGATGAACTCGGTATCTCAGATGGAAATGCAGAAATCACCGTCTTCTCCATCGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380249.5
CDS GCA 72 bp CAAGTTGAGTATCCCATTGAGAACATAGCTGAACTCTaGATGATCCTGAGCAACGAGTGCCACCAGACCTTC +
Preference number: 6 (lower is better)
Translates to: QVEYPIENIAEL*MILSNECHQTF
Trigger: GAAGGTCTGGTGGCACTCGTTGCTCAGGATCATGCAGAGTTCAGCTATGTTCTCAATGGGATACTCAACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS CCA 72 bp CTTGAGACTCATCAGCACTTGGTTTCCCAGGTAACCTaGCAGTCAGCATGTTCAGGATTTCCTCAACCTTCT +
Preference number: 6 (lower is better)
Translates to: LETHQHLVSQVT*QSACSGFPQPS
Trigger: AGAAGGTTGAGGAAATCCTGAACATGCTGACTGCCAGGTTACCTGGGAAACCAAGTGCTGATGAGTCTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000603044.5
ENST00000603695.1
ENST00000605086.5
CDS CCA 72 bp GAAACTTCGCCCTCTGCTGGCCATCAGTCTGTTCAATaGTTTTCCATCTTTACTCTGCAAGGCCAGGTTTCA +
Preference number: 6 (lower is better)
Translates to: ETSPSAGHQSVQ*FSIFTLQGQVS
Trigger: TGAAACCTGGCCTTGCAGAGTAAAGATGGAAAACCATTGAACAGACTGATGGCCAGCAGAGGGCGAAGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603552.1
CDS CAA 72 bp ACCAGACCTTCACAGCAGGCTGTTCGAACCACTACATaGTCACTGCAACACTTCTCCCACAGCAAGTTCAAA +
Preference number: 6 (lower is better)
Translates to: TRPSQQAVRTTT*SLQHFSHSKFK
Trigger: TTTGAACTTGCTGTGGGAGAAGTGTTGCAGTGACAATGTAGTGGTTCGAACAGCCTGCTGTGAAGGTCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS CAA 90 bp GGCTGCTGGAGTAGCTTGATCAGGCTTGGTGCATTCATTCAACACTaGAGAAATAGCTGCCAACATATCTGCACCATGTTGATATGGCCT +
Preference number: 6 (lower is better)
Translates to: GCWSSLIRLGAFIQH*RNSCQHICTMLIWP
Trigger: AGGCCATATCAACATGGTGCAGATATGTTGGCAGCTATTTCTCAAGTGTTGAATGAATGCACCAAGCCTGATCAAGCTACTCCAGCAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS TCA 72 bp GGCATCACTAGCAGCAGAGAGGACTTTGGGATTTTCTaGTCCTCAGTAACAGAGAGGAGCTTCAAAGCTAGA +
Preference number: 6 (lower is better)
Translates to: GITSSREDFGIF*SSVTERSFKAR
Trigger: TCTAGCTTTGAAGCTCCTCTCTGTTACTGAGGATCAGAAAATCCCAAAGTCCTCTCTGCTGCTAGTGATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS TCA 72 bp TATGAACCTCATGTACAAGAGCAAGTGAAGTCTGCTTaGAACTTCGCCCTCTGCTGGCCATCAGTCTGTTCA +
Preference number: 6 (lower is better)
Translates to: YEPHVQEQVKSA*NFALCWPSVCS
Trigger: TGAACAGACTGATGGCCAGCAGAGGGCGAAGTTTCAAGCAGACTTCACTTGCTCTTGTACATGAGGTTCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
ENST00000605852.1
CDS TCA 72 bp GAAGTTGCCCTCTGGGTTGGTAATGGCTATCCACAATaGCCAAGAGTGTATCAAGTACCATGGAAACCCACT +
Preference number: 6 (lower is better)
Translates to: EVALWVGNGYPQ*PRVYQVPWKPT
Trigger: AGTGGGTTTCCATGGTACTTGATACACTCTTGGTCATTGTGGATAGCCATTACCAACCCAGAGGGCAACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS TCA 72 bp AGCCTCTGTAGCCTCAATAATTCCAGCACTGAACGCTaGTGTACATACACAGCTAAGTGTGTAGGCAAGGAC +
Preference number: 6 (lower is better)
Translates to: SLCSLNNSSTER*CTYTAKCVGKD
Trigger: GTCCTTGCCTACACACTTAGCTGTGTATGTACATCAGCGTTCAGTGCTGGAATTATTGAGGCTACAGAGGCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000604254.5
ENST00000605086.5
CDS CAA 72 bp TCTGTTAGAACAATTCTGATCCAGGCAGGGAGTAGTTaGCTGCCCAAGTCTTCAGCTTTTCCATGTCCACAC +
Preference number: 6 (lower is better)
Translates to: SVRTILIQAGSS*LPKSSAFPCPH
Trigger: GTGTGGACATGGAAAAGCTGAAGACTTGGGCAGCAAACTACTCCCTGCCTGGATCAGAATTGTTCTAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000604254.5
ENST00000605086.5
CDS CAA 72 bp TGGAGAGAGAAGTGCAGCCCAGTTCACAGGAGGATATaGGTAGCTTTCTCCAACAGTTGCTATGGGTTTCAT +
Preference number: 6 (lower is better)
Translates to: WREKCSPVHRRI*VAFSNSCYGFH
Trigger: ATGAAACCCATAGCAACTGTTGGAGAAAGCTACCAATATCCTCCTGTGAACTGGGCTGCACTTCTCTCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000603631.1
ENST00000605086.5
CDS CAA 90 bp GATAAGCTCGATTCATGTATGCAAGCCAGGCCTGTGGAAGAAAAATaGCACGGTGCCACTCTGAAAGCTGGATATGAACCTCATGTACAA +
Preference number: 6 (lower is better)
Translates to: DKLDSCMQARPVEEK*HGATLKAGYEPHVQ
Trigger: TTGTACATGAGGTTCATATCCAGCTTTCAGAGTGGCACCGTGCAATTTTTCTTCCACAGGCCTGGCTTGCATACATGAATCGAGCTTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS CAA 90 bp GCAAAACCTGAAGTCTGCTGGCTATTCTCCACTAACAGTCGAAGCTaGTTCATAACATCCTCAGCCTCTGTAGCCTCAATAATTCCAGCA +
Preference number: 6 (lower is better)
Translates to: AKPEVCWLFSTNSRS*FITSSASVASIIPA
Trigger: TGCTGGAATTATTGAGGCTACAGAGGCTGAGGATGTTATGAACAAGCTTCGACTGTTAGTGGAGAATAGCCAGCAGACTTCAGGTTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000604254.5
ENST00000605086.5
CDS CAA 90 bp CCTCATAAGTGGAGAGAGAAGTGCAGCCCAGTTCACAGGAGGATATaGGTAGCTTTCTCCAACAGTTGCTATGGGTTTCATCACTACTTT +
Preference number: 6 (lower is better)
Translates to: PHKWREKCSPVHRRI*VAFSNSCYGFHHYF
Trigger: AAAGTAGTGATGAAACCCATAGCAACTGTTGGAGAAAGCTACCAATATCCTCCTGTGAACTGGGCTGCACTTCTCTCTCCACTTATGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000603631.1
ENST00000605086.5
CDS CAA 90 bp GATAAGCTCGATTCATGTATGCAAGCCAGGCCTGTGGAAGAAAAATaGCACGGTGCCACTCTGAAAGCTGGATATGAACCTGATAGAACT +
Preference number: 6 (lower is better)
Translates to: DKLDSCMQARPVEEK*HGATLKAGYEPDRT
Trigger: AGTTCTATCAGGTTCATATCCAGCTTTCAGAGTGGCACCGTGCAATTTTTCTTCCACAGGCCTGGCTTGCATACATGAATCGAGCTTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603610.1
CDS TCA 72 bp AGCATATCGGTCAGGTTCACCAAGGGGAATCGTCCTTaGGAGACTAAGTACAGTTTGACAAAGGCAGCTTTT +
Preference number: 6 (lower is better)
Translates to: SISVRFTKGNRP*ETKYSLTKAAF
Trigger: AAAAGCTGCCTTTGTCAAACTGTACTTAGTCTCTCAAGGACGATTCCCCTTGGTGAACCTGACCGATATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS CCA 72 bp AGGTTCCAGTGGTCTTCCCAATTTGAACATCAAAACTaGAATCAGATTTGGCACCTGGGAGGAATCTGCTTG +
Preference number: 6 (lower is better)
Translates to: RFQWSSQFEHQN*NQIWHLGGICL
Trigger: CAAGCAGATTCCTCCCAGGTGCCAAATCTGATTCCAGTTTTGATGTTCAAATTGGGAAGACCACTGGAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS CAA 72 bp GAAGTCTGCTGGCTATTCTCCACTAACAGTCGAAGCTaGTTCATAACATCCTCAGCCTCTGTAGCCTCAATA +
Preference number: 6 (lower is better)
Translates to: EVCWLFSTNSRS*FITSSASVASI
Trigger: TATTGAGGCTACAGAGGCTGAGGATGTTATGAACAAGCTTCGACTGTTAGTGGAGAATAGCCAGCAGACTTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000604254.5
ENST00000605086.5
CDS TCA 72 bp AGAAAAATTGCACGGTGCCACTCTGAAAGCTGGATATaGACCTCATGTACAAGAGCAAGTGAAGTCTGCTTG +
Preference number: 6 (lower is better)
Translates to: RKIARCHSESWI*TSCTRASEVCL
Trigger: CAAGCAGACTTCACTTGCTCTTGTACATGAGGTTCATATCCAGCTTTCAGAGTGGCACCGTGCAATTTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
ENST00000605852.1
CDS GCA 72 bp TGCTGTATCATTTCCAAAAGGTTTAGAGCCAACTGCTaGCTAGAGGGACCTTCTTCATCCACAGATATACAG +
Preference number: 6 (lower is better)
Translates to: CCIISKRFRANC*LEGPSSSTDIQ
Trigger: CTGTATATCTGTGGATGAAGAAGGTCCCTCTAGGCAGCAGTTGGCTCTAAACCTTTTGGAAATGATACAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS GCA 72 bp TCCTGCTGTATCATTTCCAAAAGGTTTAGAGCCAACTaGTGCCTAGAGGGACCTTCTTCATCCACAGATATA +
Preference number: 6 (lower is better)
Translates to: SCCIISKRFRAN*CLEGPSSSTDI
Trigger: TATATCTGTGGATGAAGAAGGTCCCTCTAGGCAGCAGTTGGCTCTAAACCTTTTGGAAATGATACAGCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS GCA 72 bp GTGTTCTCCTGCACTAAAGTTGGCCAGGGATCTATATaGAGCATTTGCTACAATTGGGTCCTTGTTTTGAGT +
Preference number: 6 (lower is better)
Translates to: VFSCTKVGQGSI*SICYNWVLVLS
Trigger: ACTCAAAACAAGGACCCAATTGTAGCAAATGCTGCATATAGATCCCTGGCCAACTTTAGTGCAGGAGAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS GCA 72 bp GACTGTGCCTGGGTCACCATAATTTCAAGGCACAGTTaGTGGATCTCTTCACCAAAATTTAGCCTCATAAGT +
Preference number: 6 (lower is better)
Translates to: DCAWVTIISRHS*WISSPKFSLIS
Trigger: ACTTATGAGGCTAAATTTTGGTGAAGAGATCCAGCAACTGTGCCTTGAAATTATGGTGACCCAGGCACAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000603631.1
ENST00000605086.5
CDS CCA 72 bp TTATTTGAATGCATGAAACTTCTTTCAGGGCACTGCTaGAAAAACGCTGTCAGCTGCTGCAAAAACACTGGC +
Preference number: 6 (lower is better)
Translates to: LFECMKLLSGHC*KNAVSCCKNTG
Trigger: GCCAGTGTTTTTGCAGCAGCTGACAGCGTTTTTCCAGCAGTGCCCTGAAAGAAGTTTCATGCATTCAAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000604103.1
CDS TCA 72 bp TCTTCAGCTTTTCCATGTCCACACACAGACAATCCATaGACTATGTTTCCTAAAGCCAGGGCAAAACCTGAA +
Preference number: 6 (lower is better)
Translates to: SSAFPCPHTDNP*TMFPKARAKPE
Trigger: TTCAGGTTTTGCCCTGGCTTTAGGAAACATAGTTCATGGATTGTCTGTGTGTGGACATGGAAAAGCTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000604254.5
ENST00000605086.5
CDS TCA 72 bp TTCAAGCACATTAAGACAAGAAATGGGGGAAGCAGTTaGGCTGAAATTACAGGCTGTCATGACACCTCAGTA +
Preference number: 6 (lower is better)
Translates to: FKHIKTRNGGSS*AEITGCHDTSV
Trigger: TACTGAGGTGTCATGACAGCCTGTAATTTCAGCTCAACTGCTTCCCCCATTTCTTGTCTTAATGTGCTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604103.1
CDS GCA 72 bp GTTCACAGGAGGATATTGGTAGCTTTCTCCAACAGTTaGTATGGGTTTCATCACTACTTTAAGAAGGGAAGG +
Preference number: 6 (lower is better)
Translates to: VHRRILVAFSNS*YGFHHYFKKGR
Trigger: CCTTCCCTTCTTAAAGTAGTGATGAAACCCATAGCAACTGTTGGAGAAAGCTACCAATATCCTCCTGTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000603631.1
ENST00000605086.5
CDS TCA 72 bp AGCAGGGCTAGTCGGAGTTTAGCATATTCTTGTAACTaGGATGGTTCACAATACAGATACCACAGAAATGGT +
Preference number: 6 (lower is better)
Translates to: SRASRSLAYSCN*DGSQYRYHRNG
Trigger: ACCATTTCTGTGGTATCTGTATTGTGAACCATCTCAGTTACAAGAATATGCTAAACTCCGACTAGCCCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000604103.1
ENST00000605031.5
CDS TCA 72 bp AAACTTCTTCCACTTATATGGTTTTCCTCATCCAGCTaGGAATGCTGCTGGTTACTGCAAAACTGTTCACCA +
Preference number: 6 (lower is better)
Translates to: KLLPLIWFSSSS*ECCWLLQNCSP
Trigger: TGGTGAACAGTTTTGCAGTAACCAGCAGCATTCTCAGCTGGATGAGGAAAACCATATAAGTGGAAGAAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS CAA 72 bp TGTCACAACACAGTTGAAGTATCTGCTGTTCCAGTATaGATGGTTGATCTTTGTCACAAAGAACCTGGGGTT +
Preference number: 6 (lower is better)
Translates to: CHNTVEVSAVPV*MVDLCHKEPGV
Trigger: AACCCCAGGTTCTTTGTGACAAAGATCAACCATCAATACTGGAACAGCAGATACTTCAACTGTGTTGTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000604103.1
ENST00000605031.5
CDS CAA 90 bp AGAATAGGACTTATAATAAAACCAGGAGAGAAGTTGCCCTCTGGGTaGGTAATGGCTATCCACAATGACCAAGAGTGTATCAAGTACCAT +
Preference number: 6 (lower is better)
Translates to: RIGLIIKPGEKLPSG*VMAIHNDQECIKYH
Trigger: ATGGTACTTGATACACTCTTGGTCATTGTGGATAGCCATTACCAACCCAGAGGGCAACTTCTCTCCTGGTTTTATTATAAGTCCTATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS CAA 90 bp ATGGAACTATGTCACAACACAGTTGAAGTATCTGCTGTTCCAGTATaGATGGTTGATCTTTGTCACAAAGAACCTGGGGTTGAAGTAAGA +
Preference number: 6 (lower is better)
Translates to: MELCHNTVEVSAVPV*MVDLCHKEPGVEVR
Trigger: TCTTACTTCAACCCCAGGTTCTTTGTGACAAAGATCAACCATCAATACTGGAACAGCAGATACTTCAACTGTGTTGTGACATAGTTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000604103.1
ENST00000605031.5
CDS TCA 72 bp GAAAAACCATTTTCCTTTAGGACTGCAGCAATAAGATaGCCCACAGCCTGTGATTGGATAAGAGAATTTGGA +
Preference number: 6 (lower is better)
Translates to: EKPFSFRTAAIR*PTACDWIREFG
Trigger: TCCAAATTCTCTTATCCAATCACAGGCTGTGGGTCATCTTATTGCTGCAGTCCTAAAGGAAAATGGTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000604036.1
CDS TCA 72 bp AGGAGCTTCAAAGCTAGATTTAAGATTGGCTTCTGCTaGCTTGCTGGAGTCTGTAGAAGTAGTAAAGCTATT +
Preference number: 6 (lower is better)
Translates to: RSFKARFKIGFC*LAGVCRSSKAI
Trigger: AATAGCTTTACTACTTCTACAGACTCCAGCAAGTCAGCAGAAGCCAATCTTAAATCTAGCTTTGAAGCTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS TCA 72 bp CAAAGCCTTGTCAAGAGCCGTATTGTGAAAGGATGTTaGCTGGTAAGCAACATTTCTAATATAACCCATCAG +
Preference number: 6 (lower is better)
Translates to: QSLVKSRIVKGC*LVSNISNITHQ
Trigger: CTGATGGGTTATATTAGAAATGTTGCTTACCAGTCAACATCCTTTCACAATACGGCTCTTGACAAGGCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS TCA 72 bp TCACAATACAGATACCACAGAAATGGTGCCATTATTTaGATGCATGAAACTTCTTTCAGGGCACTGCTGGAA +
Preference number: 6 (lower is better)
Translates to: SQYRYHRNGAII*MHETSFRALLE
Trigger: TTCCAGCAGTGCCCTGAAAGAAGTTTCATGCATTCAAATAATGGCACCATTTCTGTGGTATCTGTATTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604103.1
CDS GCA 72 bp AATACAGATACCACAGAAATGGTGCCATTATTTGAATaGATGAAACTTCTAACCTTTCAGGGCACTGCTGGA +
Preference number: 6 (lower is better)
Translates to: NTDTTEMVPLFE*MKLLTFQGTAG
Trigger: TCCAGCAGTGCCCTGAAAGGTTAGAAGTTTCATGCATTCAAATAATGGCACCATTTCTGTGGTATCTGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605031.5
CDS GCA 72 bp GATCTGTTCATCAGAGATGTGTTTTATCCACAGAGGTaGAGATATCAGGAGATATCTCTTGGTATTCAGACT +
Preference number: 6 (lower is better)
Translates to: DLFIRDVFYPQR*RYQEISLGIQT
Trigger: AGTCTGAATACCAAGAGATATCTCCTGATATCTGCACCTCTGTGGATAAAACACATCTCTGATGAACAGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS CAA 72 bp GCTTCAAAGCTAGATTTAAGATTGGCTTCTGCTGACTaGCTGGAGTCTGTAGAAGTAGTAAAGCTATTCCAA +
Preference number: 6 (lower is better)
Translates to: ASKLDLRLASAD*LESVEVVKLFQ
Trigger: TTGGAATAGCTTTACTACTTCTACAGACTCCAGCAAGTCAGCAGAAGCCAATCTTAAATCTAGCTTTGAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS TCA 72 bp CTGGAGTCTGTAGAAGTAGTAAAGCTATTCCAATTATaGCCAGTTCAACAGGAAAATCCTCCTTCAGAAGTT +
Preference number: 6 (lower is better)
Translates to: LESVEVVKLFQL*PVQQENPPSEV
Trigger: AACTTCTGAAGGAGGATTTTCCTGTTGAACTGGTCATAATTGGAATAGCTTTACTACTTCTACAGACTCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS TCA 72 bp CTGAGCTCCAAATGCATACCTCATATTCAGTTGTATTaGCCGTTAAGGAAGGAACTAGAGAAAATAGTTCAC +
Preference number: 6 (lower is better)
Translates to: LSSKCIPHIQLY*PLRKELEKIVH
Trigger: GTGAACTATTTTCTCTAGTTCCTTCCTTAACGGTCAATACAACTGAATATGAGGTATGCATTTGGAGCTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603844.1
CDS GCA 72 bp AATACAGATACCACAGAAATGGTGCCATTATTTGAATaGATGAAACTTCTTTCAGGGCACTGCTGGAAAAAC +
Preference number: 6 (lower is better)
Translates to: NTDTTEMVPLFE*MKLLSGHCWKN
Trigger: GTTTTTCCAGCAGTGCCCTGAAAGAAGTTTCATGCATTCAAATAATGGCACCATTTCTGTGGTATCTGTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604103.1
CDS TCA 72 bp CATCATCTGTCATTTCTAAGAGGCATTTTGCTATGCTaGTATACAGCTCTAGATCCTTTCTCCGAATCTTAT +
Preference number: 6 (lower is better)
Translates to: HHLSFLRGILLC*YTALDPFSESY
Trigger: ATAAGATTCGGAGAAAGGATCTAGAGCTGTATATCAGCATAGCAAAATGCCTCTTAGAAATGACAGATGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338382.10
ENST00000380249.5
ENST00000605086.5
CDS CAA 72 bp TCATTATATAATATAGGTTCCAGTGGTCTTCCCAATTaGAACATCAAAACTGGAATCAGATTTGGCACCTGG +
Preference number: 6 (lower is better)
Translates to: SLYNIGSSGLPN*NIKTGIRFGTW
Trigger: CCAGGTGCCAAATCTGATTCCAGTTTTGATGTTCAAATTGGGAAGACCACTGGAACCTATATTATATAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5
CDS CAA 90 bp TACAATATATCATTATATAATATAGGTTCCAGTGGTCTTCCCAATTaGAACATCAAAACTGGAATCAGATTTGGCACCTGGGAGGAATCT +
Preference number: 6 (lower is better)
Translates to: YNISLYNIGSSGLPN*NIKTGIRFGTWEES
Trigger: AGATTCCTCCCAGGTGCCAAATCTGATTCCAGTTTTGATGTTCAAATTGGGAAGACCACTGGAACCTATATTATATAATGATATATTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338382.10
ENST00000380249.5