RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FNIP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000052795

Ensembl transcript IDs: ENST00000264433.11, ENST00000504704.6, ENST00000504715.1, ENST00000505130.1, ENST00000505445.1, ENST00000512986.5

Found 323 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTCCCTTTCTTGCCTCTGCGGCTAAGCCAGAATGAAGCCACTGGGTaGTGTACGGCGTGTGAGCGGTGGATCTCAACACAATTCTGTGAG +
Preference number: 1 (lower is better)
Translates to: VPFLPLRLSQNEATG*CTACERWISTQFCE
Trigger: CTCACAGAATTGTGTTGAGATCCACCGCTCACACGCCGTACACCACCCAGTGGCTTCATTCTGGCTTAGCCGCAGAGGCAAGAAAGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR TCA 90 bp TTTACACGTAATGAGAAACGGATGTGGGGTGAGCTGAGCCACAGGTaGGGTTCCTTCTCTCTCTGTAACACAACAGCAAACAATGATGTC +
Preference number: 1 (lower is better)
Translates to: FTRNEKRMWGELSHR*GSFSLCNTTANNDV
Trigger: GACATCATTGTTTGCTGTTGTGTTACAGAGAGAGAAGGAACCTCACCTGTGGCTCAGCTCACCCCACATCCGTTTCTCATTACGTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR TCA 90 bp CTGACAGTTTATTTACACGTAATGAGAAACGGATGTGGGGTGAGCTaGGCCACAGGTGAGGTTCCTTCTCTCTCTGTAACACAACAGCAA +
Preference number: 1 (lower is better)
Translates to: LTVYLHVMRNGCGVS*ATGEVPSLSVTQQQ
Trigger: TTGCTGTTGTGTTACAGAGAGAGAAGGAACCTCACCTGTGGCTCAGCTCACCCCACATCCGTTTCTCATTACGTGTAAATAAACTGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR CCA 90 bp TCCAGTTTGGGGAGCTCATGCTTAAACTTGGAAGCAGTTTCCTACTaGAATATTATGTACACTGCTGACCACCCCGCTCAAGTCACTTGT +
Preference number: 1 (lower is better)
Translates to: SSLGSSCLNLEAVSY*NIMYTADHPAQVTC
Trigger: ACAAGTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATATTCCAGTAGGAAACTGCTTCCAAGTTTAAGCATGAGCTCCCCAAACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR TCA 90 bp CTTAAACTTGGAAGCAGTTTCCTACTGGAATATTATGTACACTGCTaGCCACCCCGCTCAAGTCACTTGTCTTTATTCTGCCCAAACAGC +
Preference number: 1 (lower is better)
Translates to: LKLGSSFLLEYYVHC*PPRSSHLSLFCPNS
Trigger: GCTGTTTGGGCAGAATAAAGACAAGTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATATTCCAGTAGGAAACTGCTTCCAAGTTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR GCA 90 bp GAAAGAGGTCCATCACAGGGACATTTACAGACTTCTGCTCTGTCATaGCTCACTAGCTTGCTTGGAAAAGCAAGATGCTACAAAAGTTAC +
Preference number: 1 (lower is better)
Translates to: ERGPSQGHLQTSALS*LTSLLGKARCYKSY
Trigger: GTAACTTTTGTAGCATCTTGCTTTTCCAAGCAAGCTAGTGAGGCATGACAGAGCAGAAGTCTGTAAATGTCCCTGTGATGGACCTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR GCA 90 bp TACATCTTGATGGGATTAAGAGGCTACATTGATTCTTGGGTTTATTaGACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAA +
Preference number: 1 (lower is better)
Translates to: YILMGLRGYIDSWVY*TNNPSLTYPWLHLK
Trigger: TTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACCCAAGAATCAATGTAGCCTCTTAATCCCATCAAGATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR CCA 90 bp GATTCTTGGGTTTATTGCACCAACAATCCATCTCTGACCTACCCATaGCTGCATCTGAAACAAGGTAAACTCCAAGAAGAAATGAAAACA +
Preference number: 1 (lower is better)
Translates to: DSWVYCTNNPSLTYP*LHLKQGKLQEEMKT
Trigger: TGTTTTCATTTCTTCTTGGAGTTTACCTTGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACCCAAGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR GCA 90 bp AAGTCACTTGTCTTTATTCTGCCCAAACAGCACAAGGCAATCTGTTaGAACAGCTTAGTGTTTAGTGCTTATGTTTCCTCCTACCAAAAA +
Preference number: 1 (lower is better)
Translates to: KSLVFILPKQHKAIC*NSLVFSAYVSSYQK
Trigger: TTTTTGGTAGGAGGAAACATAAGCACTAAACACTAAGCTGTTGCAACAGATTGCCTTGTGCTGTTTGGGCAGAATAAAGACAAGTGACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR-3UTR TCA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGGGATGTGGGGTGAGCTaGGCCACAGGTGAGGTTCCT +
Preference number: 2 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQGCGVS*ATGEVP
Trigger: AGGAACCTCACCTGTGGCTCAGCTCACCCCACATCC...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR-3UTR TCA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGCCAAAGTCTGTATTCTaGTTGTTGTCTCAGAATAGC +
Preference number: 2 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQPKSVF*LLSQNS
Trigger: GCTATTCTGAGACAACAATCAGAATACAGACTTTGG...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR-3UTR GCA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGGATTCTTGGGTTTATTaGACCAACAATCCATCTCTG +
Preference number: 2 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQDSWVY*TNNPSL
Trigger: CAGAGATGGATTGTTGGTGCAATAAACCCAAGAATC...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR-3UTR CCA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGGAAGATGGCACAATGTaGCTTTCTTTGCTTTACCTT +
Preference number: 2 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQEDGTM*LSLLYL
Trigger: AAGGTAAAGCAAAGAAAGCCACATTGTGCCATCTTC...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR-3UTR TCA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACATATTATGTACACTGCTaGCCACCCCGCTCAAGTCAC +
Preference number: 2 (lower is better)
Translates to: GLLHQQSISDLPMAASETYYVHC*PPRSSH
Trigger: GTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATA...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR-3UTR CCA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGGAAGCAGTTTCCTACTaGAATATTATGTACACTGCT +
Preference number: 2 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQEAVSY*NIMYTA
Trigger: AGCAGTGTACATAATATTCCAGTAGGAAACTGCTTC...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR-3UTR CCA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGTCTTTTACTTTACCCTaGATGTCAGTACATAGTCTG +
Preference number: 2 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQSFTLP*MSVHSL
Trigger: CAGACTATGTACTGACATCCAGGGTAAAGTAAAAGA...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR-3UTR TCA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACGAAACGGATGTGGGGTaGGCTGAGCCACAGGTGAGG +
Preference number: 2 (lower is better)
Translates to: QTDQKRSPINFSYGASNDETDVG*AEPQVR
Trigger: CCTCACCTGTGGCTCAGCTCACCCCACATCCGTTTC...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR-3UTR TCA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACACTAAAAAGCAAACTGTaGCCTGGAATCCAAAGTCTG +
Preference number: 2 (lower is better)
Translates to: GLLHQQSISDLPMAASETLKSKL*PGIQSL
Trigger: CAGACTTTGGATTCCAGGTCACAGTTTGCTTTTTAG...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR-3UTR GCA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACAAGTTTGGGGAGCTCATaGTTAAACTTGGAAGCAGTT +
Preference number: 2 (lower is better)
Translates to: GLLHQQSISDLPMAASETSLGSS*LNLEAV
Trigger: AACTGCTTCCAAGTTTAAGCATGAGCTCCCCAAACT...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR CAA 90 bp CCACTGGAGCTGAAGATGGCACAATGTGGCTTTCTTTGCTTTACCTaGTCTAAAAAGCAAACTGTGACCTGGAATCCAAAGTCTGTATTC +
Preference number: 2 (lower is better)
Translates to: PLELKMAQCGFLCFT*SKKQTVTWNPKSVF
Trigger: GAATACAGACTTTGGATTCCAGGTCACAGTTTGCTTTTTAGACAAGGTAAAGCAAAGAAAGCCACATTGTGCCATCTTCAGCTCCAGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR-3UTR TCA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACCCAACAATCCATCTCTaGCCTACCCATGGCTGCATC +
Preference number: 2 (lower is better)
Translates to: QTDQKRSPINFSYGASNDPTIHL*PTHGCI
Trigger: GATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGG...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR-3UTR GCA 90 bp CCTACTGGAATATTATGTACACTGCTGACCACCCCGCTCAAGTCACTTGTCTTTCACAAGGCAATCTGTTaGAACAGCTTAGTGTTTAGT +
Preference number: 2 (lower is better)
Translates to: PTGILCTLLTTPLKSLVFHKAIC*NSLVFS
Trigger: ACTAAACACTAAGCTGTTGCAACAGATTGCCTTGTG...AAAGACAAGTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATATTCCAGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR-3UTR TCA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACCTGGAAGGTGGTGAATaGGGGAAAGTGCCCAAAACA +
Preference number: 2 (lower is better)
Translates to: QTDQKRSPINFSYGASNDLEGGE*GKVPKT
Trigger: TGTTTTGGGCACTTTCCCTCATTCACCACCTTCCAG...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR-3UTR GCA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACCAGAGCCTGGTTAACTaGTTGAGATCTGCAAAGTGC +
Preference number: 2 (lower is better)
Translates to: QTDQKRSPINFSYGASNDQSLVN*LRSAKC
Trigger: GCACTTTGCAGATCTCAAGCAGTTAACCAGGCTCTG...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR-3UTR CCA 90 bp CCTACTGGAATATTATGTACACTGCTGACCACCCCGCTCAAGTCACTTGTCTTTTTCTTTGTTGATTCATaGGTAACAAATGGCCTAAAG +
Preference number: 2 (lower is better)
Translates to: PTGILCTLLTTPLKSLVFFFVDS*VTNGLK
Trigger: CTTTAGGCCATTTGTTACCCATGAATCAACAAAGAA...AAAGACAAGTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATATTCCAGTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR-3UTR CCA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACGGATTAGGTTCTGACTaGAATCCTGAGTGTCACGGA +
Preference number: 2 (lower is better)
Translates to: QTDQKRSPINFSYGASNDGLGSD*NPECHG
Trigger: TCCGTGACACTCAGGATTCCAGTCAGAACCTAATCC...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR-3UTR GCA 90 bp GGATGTCAGTACATAGTCTGTTTCACGGTCAGTAAACTGAAGTTTCTTTTATATGTCATCCTGAACTGCTaGAGGTTTCATTTCCCACCA +
Preference number: 2 (lower is better)
Translates to: GCQYIVCFTVSKLKFLLYVILNC*RFHFPP
Trigger: TGGTGGGAAATGAAACCTGCAGCAGTTCAGGATGAC...ATATAAAAGAAACTTCAGTTTACTGACCGTGAAACAGACTATGTACTGACATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR-3UTR CCA 90 bp GGATGTCAGTACATAGTCTGTTTCACGGTCAGTAAACTGAAGTTTCTTTTATATTCTCTGACCTACCCATaGCTGCATCTGAAACAAGGT +
Preference number: 2 (lower is better)
Translates to: GCQYIVCFTVSKLKFLLYSLTYP*LHLKQG
Trigger: ACCTTGTTTCAGATGCAGCCATGGGTAGGTCAGAGA...ATATAAAAGAAACTTCAGTTTACTGACCGTGAAACAGACTATGTACTGACATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR-3UTR TCA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACCTCTTCTCATGCTTTTaGCATCACAGAGAGCTTATT +
Preference number: 2 (lower is better)
Translates to: QTDQKRSPINFSYGASNDLFSCF*HHRELI
Trigger: AATAAGCTCTCTGTGATGTCAAAAGCATGAGAAGAG...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR-3UTR TCA 90 bp GGATGTCAGTACATAGTCTGTTTCACGGTCAGTAAACTGAAGTTTCTTTTATATAACCTAAGTCTTCAATaGAGCATCAGCTTGACAGCA +
Preference number: 2 (lower is better)
Translates to: GCQYIVCFTVSKLKFLLYNLSLQ*SISLTA
Trigger: TGCTGTCAAGCTGATGCTTCATTGAAGACTTAGGTT...ATATAAAAGAAACTTCAGTTTACTGACCGTGAAACAGACTATGTACTGACATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR-3UTR TCA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACCTTCGAAAAATGGATTaGAGCCTGTACAAAAAGCTA +
Preference number: 2 (lower is better)
Translates to: QTDQKRSPINFSYGASNDLRKMD*SLYKKL
Trigger: TAGCTTTTTGTACAGGCTTCAATCCATTTTTCGAAG...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR-3UTR GCA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACTCAGACTGTACACTTTaGTGCTACAAACTACATCTT +
Preference number: 2 (lower is better)
Translates to: QTDQKRSPINFSYGASNDSDCTL*CYKLHL
Trigger: AAGATGTAGTTTGTAGCAGCAAAGTGTACAGTCTGA...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR-3UTR CCA 90 bp GGATGTCAGTACATAGTCTGTTTCACGGTCAGTAAACTGAAGTTTCTTTTATATTTCATGGGTAACAAATaGCCTAAAGTGTTCACGACA +
Preference number: 2 (lower is better)
Translates to: GCQYIVCFTVSKLKFLLYFMGNK*PKVFTT
Trigger: TGTCGTGAACACTTTAGGCCATTTGTTACCCATGAA...ATATAAAAGAAACTTCAGTTTACTGACCGTGAAACAGACTATGTACTGACATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR-3UTR CCA 90 bp GGATGTCAGTACATAGTCTGTTTCACGGTCAGTAAACTGAAGTTTCTTTTATATAAGCAAACTGTGACCTaGAATCCAAAGTCTGTATTC +
Preference number: 2 (lower is better)
Translates to: GCQYIVCFTVSKLKFLLYKQTVT*NPKSVF
Trigger: GAATACAGACTTTGGATTCCAGGTCACAGTTTGCTT...ATATAAAAGAAACTTCAGTTTACTGACCGTGAAACAGACTATGTACTGACATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR-3UTR CCA 90 bp GGATGTCAGTACATAGTCTGTTTCACGGTCAGTAAACTGAAGTTTCTTTTATATACTATAAGGAAAAAGTaGCTTCAGCTGGAAGAACTT +
Preference number: 2 (lower is better)
Translates to: GCQYIVCFTVSKLKFLLYTIRKK*LQLEEL
Trigger: AAGTTCTTCCAGCTGAAGCCACTTTTTCCTTATAGT...ATATAAAAGAAACTTCAGTTTACTGACCGTGAAACAGACTATGTACTGACATCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR CCA 72 bp TTGCCTCTGCGGCTAAGCCAGAATGAAGCCACTGGGTaGTGTACGGCGTGTGAGCGGTGGATCTCAACACAA +
Preference number: 3 (lower is better)
Translates to: LPLRLSQNEATG*CTACERWISTQ
Trigger: TTGTGTTGAGATCCACCGCTCACACGCCGTACACCACCCAGTGGCTTCATTCTGGCTTAGCCGCAGAGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR-3UTR CAA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGCCCCGCTCAAGTCACTaGTCTTTATTCTGCCCAAAC +
Preference number: 3 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQPRSSH*SLFCPN
Trigger: GTTTGGGCAGAATAAAGACAAGTGACTTGAGCGGGG...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR-3UTR CAA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGGCTCTTCTCATGCTTTaGACATCACAGAGAGCTTAT +
Preference number: 3 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQALLML*TSQRAY
Trigger: ATAAGCTCTCTGTGATGTCAAAAGCATGAGAAGAGC...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR-3UTR CAA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGTATGTTTTCTCCAGTTaGGGGAGCTCATGCTTAAAC +
Preference number: 3 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQYVFSS*GSSCLN
Trigger: GTTTAAGCATGAGCTCCCCAAACTGGAGAAAACATA...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR TCA 72 bp AATGAGAAACGGATGTGGGGTGAGCTGAGCCACAGGTaGGGTTCCTTCTCTCTCTGTAACACAACAGCAAAC +
Preference number: 3 (lower is better)
Translates to: NEKRMWGELSHR*GSFSLCNTTAN
Trigger: GTTTGCTGTTGTGTTACAGAGAGAGAAGGAACCTCACCTGTGGCTCAGCTCACCCCACATCCGTTTCTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR-3UTR CAA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGTTCAGACTGTACACTTaGCTGCTACAAACTACATCT +
Preference number: 3 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQFRLYT*LLQTTS
Trigger: AGATGTAGTTTGTAGCAGCAAAGTGTACAGTCTGAA...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR CCA 72 bp GGGAGCTCATGCTTAAACTTGGAAGCAGTTTCCTACTaGAATATTATGTACACTGCTGACCACCCCGCTCAA +
Preference number: 3 (lower is better)
Translates to: GSSCLNLEAVSY*NIMYTADHPAQ
Trigger: TTGAGCGGGGTGGTCAGCAGTGTACATAATATTCCAGTAGGAAACTGCTTCCAAGTTTAAGCATGAGCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR TCA 72 bp GGAAGCAGTTTCCTACTGGAATATTATGTACACTGCTaGCCACCCCGCTCAAGTCACTTGTCTTTATTCTGC +
Preference number: 3 (lower is better)
Translates to: GSSFLLEYYVHC*PPRSSHLSLFC
Trigger: GCAGAATAAAGACAAGTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATATTCCAGTAGGAAACTGCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR GCA 72 bp GTCTTTATTCTGCCCAAACAGCACAAGGCAATCTGTTaGAACAGCTTAGTGTTTAGTGCTTATGTTTCCTCC +
Preference number: 3 (lower is better)
Translates to: VFILPKQHKAIC*NSLVFSAYVSS
Trigger: GGAGGAAACATAAGCACTAAACACTAAGCTGTTGCAACAGATTGCCTTGTGCTGTTTGGGCAGAATAAAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR-3UTR CAA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACTCATGCCTCACTAGCTaGCTTGGAAAAGCAAGATGC +
Preference number: 3 (lower is better)
Translates to: QTDQKRSPINFSYGASNDSCLTS*LGKARC
Trigger: GCATCTTGCTTTTCCAAGCAAGCTAGTGAGGCATGA...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR GCA 72 bp AGGATAAAACATACGGTTTCAGACTGTACACTTTGCTaGTACAAACTACATCTTGATGGGATTAAGAGGCTA +
Preference number: 3 (lower is better)
Translates to: RIKHTVSDCTLC*YKLHLDGIKRL
Trigger: TAGCCTCTTAATCCCATCAAGATGTAGTTTGTAGCAGCAAAGTGTACAGTCTGAAACCGTATGTTTTATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR TCA 72 bp TACAAACTACATCTTGATGGGATTAAGAGGCTACATTaGTTCTTGGGTTTATTGCACCAACAATCCATCTCT +
Preference number: 3 (lower is better)
Translates to: YKLHLDGIKRLH*FLGLLHQQSIS
Trigger: AGAGATGGATTGTTGGTGCAATAAACCCAAGAATCAATGTAGCCTCTTAATCCCATCAAGATGTAGTTTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR GCA 72 bp ATAAGGATAAAACATACGGTTTCAGACTGTACACTTTaGTGCTACAAACTACATCTTGATGGGATTAAGAGG +
Preference number: 3 (lower is better)
Translates to: IRIKHTVSDCTL*CYKLHLDGIKR
Trigger: CCTCTTAATCCCATCAAGATGTAGTTTGTAGCAGCAAAGTGTACAGTCTGAAACCGTATGTTTTATCCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGCCCGCTGGACACACCTaGGGGCAACAGGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQPAGHT*GQQAPA
Trigger: TGCTGGAGCCTGTTGCCCCCAGGTGTGTCCAGCGGG...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR GCA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGGCAGCGTGGCTGAGCTaGCCAGCAATATCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQAAWLS*PAISAA
Trigger: GGCAGCAGATATTGCTGGGCAGCTCAGCCACGCTGC...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACACGGGGCCGCTGCGACTaGGTAACTCTGCTCGGCGCC +
Preference number: 4 (lower is better)
Translates to: GLLHQQSISDLPMAASETRGRCD*VTLLGA
Trigger: GGCGCCGAGCAGAGTTACTCAGTCGCAGCGGCCCCG...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGGTCCTGTCACCACCGTaGCCCAGATCTAGCATGGCT +
Preference number: 4 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQVLSPP*PRSSMA
Trigger: AGCCATGCTAGATCTGGGTCACGGTGGTGACAGGAC...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGGTAGCCCGCCAGAAGTaGGCGGCCAAAGTTCCTTAC +
Preference number: 4 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQVARQK*AAKVPY
Trigger: GTAAGGAACTTTGGCCGCTCACTTCTGGCGGGCTAC...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGGTGGTGTACGGCGTGTaGGCGGTGGATCTCAACACA +
Preference number: 4 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQVVYGV*AVDLNT
Trigger: TGTGTTGAGATCCACCGCTCACACGCCGTACACCAC...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp CCTACTGGAATATTATGTACACTGCTGACCACCCCGCTCAAGTCACTTGTCTTTTTAGGAGCCCTGCCCTaGGCAGACGCCGCCGCGGAG +
Preference number: 4 (lower is better)
Translates to: PTGILCTLLTTPLKSLVFLGALP*ADAAAE
Trigger: CTCCGCGGCGGCGTCTGCCCAGGGCAGGGCTCCTAA...AAAGACAAGTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATATTCCAGTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGAATGAAGCCACTGGGTaGTGTACGGCGTGTGAGCGG +
Preference number: 4 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQNEATG*CTACER
Trigger: CCGCTCACACGCCGTACACCACCCAGTGGCTTCATT...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGGGGCATGGGAGCAAGTaGGGTCCCTTTCTTGCCTCT +
Preference number: 4 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQGHGSK*GPFLAS
Trigger: AGAGGCAAGAAAGGGACCCCACTTGCTCCCATGCCC...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGTGCTGCCCCTTTTGTTaGAGAGCTTCTGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQCCPFC*RASGAG
Trigger: CCCTGCTCCAGAAGCTCTTCAACAAAAGGGGCAGCA...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR GCA 90 bp CCTACTGGAATATTATGTACACTGCTGACCACCCCGCTCAAGTCACTTGTCTTTACGCCGCCGCGGAGCTaGCGCTGCTGCCCCTTTTGT +
Preference number: 4 (lower is better)
Translates to: PTGILCTLLTTPLKSLVFTPPRS*RCCPFC
Trigger: ACAAAAGGGGCAGCAGCGGCAGCTCCGCGGCGGCGT...AAAGACAAGTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATATTCCAGTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR GCA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGTCCCTACCACTACGGTaGGAGTCAGTCTCACTGGAG +
Preference number: 4 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQSLPLR*ESVSLE
Trigger: CTCCAGTGAGACTGACTCGCACCGTAGTGGTAGGGA...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR GCA 90 bp CCTACTGGAATATTATGTACACTGCTGACCACCCCGCTCAAGTCACTTGTCTTTCCCTCCCGTTCCTCCTaGACCGTGGGAGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: PTGILCTLLTTPLKSLVFPSRSS*TVGGCA
Trigger: GGCACAGCCTCCCACGGTGCAGGAGGAACGGGAGGG...AAAGACAAGTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATATTCCAGTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGGCGAGTCAGTCTCACTaGAGAGCCTATGGCTCCGTA +
Preference number: 4 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQASQSH*RAYGSV
Trigger: TACGGAGCCATAGGCTCTCCAGTGAGACTGACTCGC...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACAAGGCCAGGGCCCCGCTaGACACACCTGGGGGCAACA +
Preference number: 4 (lower is better)
Translates to: GLLHQQSISDLPMAASETRPGPR*THLGAT
Trigger: TGTTGCCCCCAGGTGTGTCCAGCGGGGCCCTGGCCT...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGTCCCAGGGCGCTATCTaGGCTTTCATTTCGGGGAAT +
Preference number: 4 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQSQGAI*AFISGN
Trigger: ATTCCCCGAAATGAAAGCTCAGATAGCGCCCTGGGA...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGCCAACAATCCATCTCTaGCCTACCCATGGCTGCATC +
Preference number: 4 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQPTIHL*PTHGCI
Trigger: GATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGG...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR GCA 90 bp CCTACTGGAATATTATGTACACTGCTGACCACCCCGCTCAAGTCACTTGTCTTTTGGCCCCAGGCACCCTaGGCTGCAAGCCTCAGAACC +
Preference number: 4 (lower is better)
Translates to: PTGILCTLLTTPLKSLVFWPQAP*AASLRT
Trigger: GGTTCTGAGGCTTGCAGCGCAGGGTGCCTGGGGCCA...AAAGACAAGTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATATTCCAGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR GCA 90 bp CCTACTGGAATATTATGTACACTGCTGACCACCCCGCTCAAGTCACTTGTCTTTCACCGTGGGAGGCTGTaGCCAAGTCAGCAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: PTGILCTLLTTPLKSLVFHRGRL*PSQQRG
Trigger: GCCACGCTGCTGACTTGGGCACAGCCTCCCACGGTG...AAAGACAAGTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATATTCCAGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACGCAGGGTCGGGGCCATaGTGCCGCCGCCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QTDQKRSPINFSYGASNDAGSGP*CRRRSS
Trigger: GGAGCTGCGGCGGCGGCATCATGGCCCCGACCCTGC...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp CCTACTGGAATATTATGTACACTGCTGACCACCCCGCTCAAGTCACTTGTCTTTTTTCCAGGAAGCGTCTaGTGCTGGCCCCAGGCACCC +
Preference number: 4 (lower is better)
Translates to: PTGILCTLLTTPLKSLVFFPGSV*CWPQAP
Trigger: GGGTGCCTGGGGCCAGCATCAGACGCTTCCTGGAAA...AAAGACAAGTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATATTCCAGTAGG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR GCA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACACCAGGCACCCTGCGCTaGAAGCCTCAGAACCCTGCT +
Preference number: 4 (lower is better)
Translates to: GLLHQQSISDLPMAASETPGTLR*KPQNPA
Trigger: AGCAGGGTTCTGAGGCTTGCAGCGCAGGGTGCCTGG...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR GCA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGTCAGCTTCTCATCACTaGCGGTCCCATGAAGCACAA +
Preference number: 4 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQSASHH*RSHEAQ
Trigger: TTGTGCTTCATGGGACCGGCAGTGATGAGAAGCTGA...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGTCACTGGAGAGCCTATaGCTCCGTAAAGATCACCCA +
Preference number: 4 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQSLESL*LRKDHP
Trigger: TGGGTGATCTTTACGGAGCCATAGGCTCTCCAGTGA...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGTCACAGACAGCTTGCTaGTCCATCTTCATTCCTGCC +
Preference number: 4 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQSQTAC*SIFIPA
Trigger: GGCAGGAATGAAGATGGACCAGCAAGCTGTCTGTGA...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp CCTACTGGAATATTATGTACACTGCTGACCACCCCGCTCAAGTCACTTGTCTTTCATCAGCAGCCTCACTaGCCTCCAAGGAGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: PTGILCTLLTTPLKSLVFHQQPH*PPRRGH
Trigger: GTGGCCCCTCCTTGGAGGCCAGTGAGGCTGCTGATG...AAAGACAAGTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATATTCCAGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGCTTCCATCAAACGGCTaGCATAAAACTGGACTCGGA +
Preference number: 4 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQLPSNG*HKTGLG
Trigger: TCCGAGTCCAGTTTTATGTCAGCCGTTTGATGGAAG...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGCCACAAAATGCATTCTaGGGTTTCCAGGAAGCGTCT +
Preference number: 4 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQPQNAF*GFQEAS
Trigger: AGACGCTTCCTGGAAACCTCAGAATGCATTTTGTGG...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp CCTACTGGAATATTATGTACACTGCTGACCACCCCGCTCAAGTCACTTGTCTTTGAAACCTGCGGGTCCTaGGCCACATCAGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: PTGILCTLLTTPLKSLVFETCGS*ATSAAS
Trigger: TGAGGCTGCTGATGTGGCTCAGGACCCGCAGGTTTC...AAAGACAAGTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATATTCCAGTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGTCTGAAAGCCGATTCTaGGGACAGCAAACATTCTCC +
Preference number: 4 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQSESRF*GQQTFS
Trigger: GGAGAATGTTTGCTGTCCTCAGAATCGGCTTTCAGA...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp CCTACTGGAATATTATGTACACTGCTGACCACCCCGCTCAAGTCACTTGTCTTTTGGGTGCTGATGCTCTaGGACCTTGGCAGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PTGILCTLLTTPLKSLVFWVLML*DLGRGS
Trigger: GCTGCCTCTGCCAAGGTCTCAGAGCATCAGCACCCA...AAAGACAAGTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATATTCCAGTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACAGGATGTGGGGTGAGCTaGGCCACAGGTGAGGTTCCT +
Preference number: 4 (lower is better)
Translates to: GLLHQQSISDLPMAASETGCGVS*ATGEVP
Trigger: AGGAACCTCACCTGTGGCTCAGCTCACCCCACATCC...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGAATTTTCTCAGGCTTTaGGGGGCCTGGGCTGAATTT +
Preference number: 4 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQNFLRL*GAWAEF
Trigger: AAATTCAGCCCAGGCCCCTCAAAGCCTGAGAAAATT...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGGCTGGTCTTGTGTACTaGTACTTTGGAAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQAGLVY*YFGSCS
Trigger: GGAACAGCTTCCAAAGTACCAGTACACAAGACCAGC...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACAGTTCCTCCTGCACCGTaGGAGGCTGTGCCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: GLLHQQSISDLPMAASETVPPAP*EAVPKS
Trigger: TGACTTGGGCACAGCCTCCCACGGTGCAGGAGGAAC...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGCAGCAAACATTCTCCTaGAAGCCAGGTTTAAAAGGG +
Preference number: 4 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQQQTFS*KPGLKG
Trigger: CCCTTTTAAACCTGGCTTTCAGGAGAATGTTTGCTG...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGATTCTGTCCTCTGCTTaGCATATCAACTGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQILSSA*HINWCA
Trigger: AGCACACCAGTTGATATGCCAAGCAGAGGACAGAAT...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp CCTACTGGAATATTATGTACACTGCTGACCACCCCGCTCAAGTCACTTGTCTTTCACAGGCATGACAGTTaGGACCCAGGCCAGGTGGTA +
Preference number: 4 (lower is better)
Translates to: PTGILCTLLTTPLKSLVFHRHDS*DPGQVV
Trigger: TACCACCTGGCCTGGGTCCCAACTGTCATGCCTGTG...AAAGACAAGTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATATTCCAGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGCCAAAACTTCACAGCTaGGAAGTCTTGAAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQPKLHS*EVLKSH
Trigger: ATGGCTCTTCAAGACTTCCCAGCTGTGAAGTTTTGG...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACATCCAAACTTGTTGTCTaGCTTCGAAGCCAGCGGCGC +
Preference number: 4 (lower is better)
Translates to: GLLHQQSISDLPMAASETSKLVV*LRSQRR
Trigger: GCGCCGCTGGCTTCGAAGTCAGACAACAAGTTTGGA...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR GCA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACACAAGCCTCAGAACCCTaGTCTGGCCTCCTGTTAGCT +
Preference number: 4 (lower is better)
Translates to: GLLHQQSISDLPMAASETQASEP*SGLLLA
Trigger: AGCTAACAGGAGGCCAGAGCAGGGTTCTGAGGCTTG...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR GCA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGAGAGCCATCTTGCGGTaGCTCTTTATTTTTCTCATC +
Preference number: 4 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQRAILR*LFIFLI
Trigger: GATGAGAAAAATAAAGAGGCACCGCAAGATGGCTCT...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR GCA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGCTTGAAGAGCCATCTTaGGGTGCCTCTTTATTTTTC +
Preference number: 4 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQLEEPS*GASLFF
Trigger: GAAAAATAAAGAGGCACCGCAAGATGGCTCTTCAAG...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp CCTACTGGAATATTATGTACACTGCTGACCACCCCGCTCAAGTCACTTGTCTTTACTGTCAGTGCCCTCTaGGCACTCAGGAAACCCTGT +
Preference number: 4 (lower is better)
Translates to: PTGILCTLLTTPLKSLVFTVSAL*ALRKPC
Trigger: ACAGGGTTTCCTGAGTGCCCAGAGGGCACTGACAGT...AAAGACAAGTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATATTCCAGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACAGATGCTCTGAGACCTTaGCAGAGGCAGCTCCACTTC +
Preference number: 4 (lower is better)
Translates to: GLLHQQSISDLPMAASETDALRP*QRQLHF
Trigger: GAAGTGGAGCTGCCTCTGCCAAGGTCTCAGAGCATC...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp CCTACTGGAATATTATGTACACTGCTGACCACCCCGCTCAAGTCACTTGTCTTTTTCTTGAGGTGGGCATaGGAGCAAGTGGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: PTGILCTLLTTPLKSLVFFLRWA*EQVGSL
Trigger: AAGGGACCCCACTTGCTCCCATGCCCACCTCAAGAA...AAAGACAAGTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATATTCCAGTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACAGTCAAACTCCGAACATaGCCAACTAAAGGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: GLLHQQSISDLPMAASETVKLRT*PTKGGS
Trigger: GGACCCGCCTTTAGTTGGTCATGTTCGGAGTTTGAC...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACAGCTTTGATGGGAGGGTaGTCCACAGGCATGACAGTT +
Preference number: 4 (lower is better)
Translates to: GLLHQQSISDLPMAASETALMGG*STGMTV
Trigger: AACTGTCATGCCTGTGGATCACCCTCCCATCAAAGC...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACATCTCTGAGAAGGCTTTaGTGGGAGGGTGATCCACAG +
Preference number: 4 (lower is better)
Translates to: GLLHQQSISDLPMAASETSLRRL*WEGDPQ
Trigger: CTGTGGATCACCCTCCCATCAAAGCCTTCTCAGAGA...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACAGGAGGTACGTTTCTCTaGGAAGGCTTTGATGGGAGG +
Preference number: 4 (lower is better)
Translates to: GLLHQQSISDLPMAASETGGTFL*EGFDGR
Trigger: CCTCCCATCAAAGCCTTCTCAGAGAAACGTACCTCC...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGTTCCAATCTGGAAAGTaGCCTTTTCTAAGGAAGGTT +
Preference number: 4 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQFQSGK*PFLRKV
Trigger: AACCTTCCTTAGAAAAGGTCACTTTCCAGATTGGAA...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp CCTACTGGAATATTATGTACACTGCTGACCACCCCGCTCAAGTCACTTGTCTTTAGCAAACTGGACACCTaGCTAGAGACCAGGACATCC +
Preference number: 4 (lower is better)
Translates to: PTGILCTLLTTPLKSLVFSKLDT*LETRTS
Trigger: GGATGTCCTGGTCTCTAGTCAGGTGTCCAGTTTGCT...AAAGACAAGTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATATTCCAGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGAGTGTATCTTTAAGGTaGAGCCTTTGTAACTCATGG +
Preference number: 4 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQSVSLR*SLCNSW
Trigger: CCATGAGTTACAAAGGCTCCACCTTAAAGATACACT...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACACCACTCCAGGTCAGCTaGTTCTCTTGTAGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: GLLHQQSISDLPMAASETPLQVS*FSCSSE
Trigger: CTCTGAGCTACAAGAGAACCAGCTGACCTGGAGTGG...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGGCAAAGCTTCCAATCTaGAAAGTGACCTTTTCTAAG +
Preference number: 4 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQAKLPI*KVTFSK
Trigger: CTTAGAAAAGGTCACTTTCCAGATTGGAAGCTTTGC...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACGCAAGGCCAGGCCACTaGCCGGTCTGGCAGTCTTGT +
Preference number: 4 (lower is better)
Translates to: QTDQKRSPINFSYGASNDARPGH*PVWQSC
Trigger: ACAAGACTGCCAGACCGGTCAGTGGCCTGGCCTTGC...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp CCTACTGGAATATTATGTACACTGCTGACCACCCCGCTCAAGTCACTTGTCTTTTATTATGTACACTGCTaGCCACCCCGCTCAAGTCAC +
Preference number: 4 (lower is better)
Translates to: PTGILCTLLTTPLKSLVFYYVHC*PPRSSH
Trigger: GTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATA...AAAGACAAGTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATATTCCAGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGATTAAGAGGCTACATTaGTTCTTGGGTTTATTGCAC +
Preference number: 4 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQIKRLH*FLGLLH
Trigger: GTGCAATAAACCCAAGAATCAATGTAGCCTCTTAAT...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR GCA 90 bp CCTACTGGAATATTATGTACACTGCTGACCACCCCGCTCAAGTCACTTGTCTTTAGGCTGATCGAGCAATaGCACTGTCCCTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: PTGILCTLLTTPLKSLVFRLIEQ*HCPCLH
Trigger: ATGAAGACAGGGACAGTGGCATTGCTCGATCAGCCT...AAAGACAAGTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATATTCCAGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR GCA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACATGGACTAAGTCCTTCTaGTTCCCTACCACTACGGTG +
Preference number: 4 (lower is better)
Translates to: GLLHQQSISDLPMAASETWTKSF*FPTTTV
Trigger: CACCGTAGTGGTAGGGAAGCAGAAGGACTTAGTCCA...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp CCTACTGGAATATTATGTACACTGCTGACCACCCCGCTCAAGTCACTTGTCTTTGACAGCTTCAGCTATTaGCTCATCCAGGACTGGATG +
Preference number: 4 (lower is better)
Translates to: PTGILCTLLTTPLKSLVFDSFSY*LIQDWM
Trigger: CATCCAGTCCTGGATGAGCCAATAGCTGAAGCTGTC...AAAGACAAGTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATATTCCAGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp CCTACTGGAATATTATGTACACTGCTGACCACCCCGCTCAAGTCACTTGTCTTTACAGAGGCAGGTCGTTaGATTCAATCCCCAGTACGA +
Preference number: 4 (lower is better)
Translates to: PTGILCTLLTTPLKSLVFTEAGR*IQSPVR
Trigger: TCGTACTGGGGATTGAATCCAACGACCTGCCTCTGT...AAAGACAAGTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATATTCCAGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGACTATAAGGAAAAAGTaGCTTCAGCTGGAAGAACTT +
Preference number: 4 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQTIRKK*LQLEEL
Trigger: AAGTTCTTCCAGCTGAAGCCACTTTTTCCTTATAGT...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp CCTACTGGAATATTATGTACACTGCTGACCACCCCGCTCAAGTCACTTGTCTTTACGGCGTGTGAGCGGTaGATCTCAACACAATTCTGT +
Preference number: 4 (lower is better)
Translates to: PTGILCTLLTTPLKSLVFTACER*ISTQFC
Trigger: ACAGAATTGTGTTGAGATCCACCGCTCACACGCCGT...AAAGACAAGTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATATTCCAGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp CCTACTGGAATATTATGTACACTGCTGACCACCCCGCTCAAGTCACTTGTCTTTACATCCTCTGTTTTCTaGGCTGTCACCTCCTCAATC +
Preference number: 4 (lower is better)
Translates to: PTGILCTLLTTPLKSLVFTSSVF*AVTSSI
Trigger: GATTGAGGAGGTGACAGCTCAGAAAACAGAGGATGT...AAAGACAAGTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATATTCCAGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACAAGCTGTTCCTTAGCATaGTGTGAAGATCCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: GLLHQQSISDLPMAASETSCSLA*CEDPPE
Trigger: TTCTGGGGGATCTTCACATCATGCTAAGGAACAGCT...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp CCTACTGGAATATTATGTACACTGCTGACCACCCCGCTCAAGTCACTTGTCTTTTGTCTCCTTCAGTCCTaGAGTTGGCCTTCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: PTGILCTLLTTPLKSLVFCLLQS*SWPSCC
Trigger: ACAACAAGAAGGCCAACTTCAGGACTGAAGGAGACA...AAAGACAAGTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATATTCCAGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR GCA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACAAAGATCACCCAGCTGTaGCCAAAGAGGATTATACGG +
Preference number: 4 (lower is better)
Translates to: GLLHQQSISDLPMAASETKITQL*PKRIIR
Trigger: CCGTATAATCCTCTTTGGGCACAGCTGGGTGATCTT...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR GCA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACAGTCCATCTTCATTCCTaGCCCCAAAACTTCACAGCT +
Preference number: 4 (lower is better)
Translates to: GLLHQQSISDLPMAASETVHLHS*PQNFTA
Trigger: AGCTGTGAAGTTTTGGGGGCAGGAATGAAGATGGAC...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR GCA 90 bp CCTACTGGAATATTATGTACACTGCTGACCACCCCGCTCAAGTCACTTGTCTTTGTCATCCTGAACTGCTaGAGGTTTCATTTCCCACCA +
Preference number: 4 (lower is better)
Translates to: PTGILCTLLTTPLKSLVFVILNC*RFHFPP
Trigger: TGGTGGGAAATGAAACCTGCAGCAGTTCAGGATGAC...AAAGACAAGTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATATTCCAGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR GCA 90 bp CCTACTGGAATATTATGTACACTGCTGACCACCCCGCTCAAGTCACTTGTCTTTCAGAGCCTGGTTAACTaGTTGAGATCTGCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: PTGILCTLLTTPLKSLVFQSLVN*LRSAKC
Trigger: GCACTTTGCAGATCTCAAGCAGTTAACCAGGCTCTG...AAAGACAAGTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATATTCCAGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACAGGATTAGGTTCTGACTaGAATCCTGAGTGTCACGGA +
Preference number: 4 (lower is better)
Translates to: GLLHQQSISDLPMAASETGLGSD*NPECHG
Trigger: TCCGTGACACTCAGGATTCCAGTCAGAACCTAATCC...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACATTCCTTAGCATGATGTaGAGATCCCCCAGAAGAACT +
Preference number: 4 (lower is better)
Translates to: GLLHQQSISDLPMAASETFLSMM*RSPRRT
Trigger: AGTTCTTCTGGGGGATCTTCACATCATGCTAAGGAA...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp GGATGTCAGTACATAGTCTGTTTCACGGTCAGTAAACTGAAGTTTCTTTTATATGGTGATCCACAGGCATaGCAGTTGGGACCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: GCQYIVCFTVSKLKFLLYGDPQA*QLGPRP
Trigger: TGGCCTGGGTCCCAACTGTCATGCCTGTGGATCACC...ATATAAAAGAAACTTCAGTTTACTGACCGTGAAACAGACTATGTACTGACATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACAGCCTGGTTAACTGCTTaGGATCTGCAAAGTGCTAAA +
Preference number: 4 (lower is better)
Translates to: GLLHQQSISDLPMAASETAWLTA*DLQSAK
Trigger: TTTAGCACTTTGCAGATCTCAAGCAGTTAACCAGGC...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR GCA 90 bp CCTACTGGAATATTATGTACACTGCTGACCACCCCGCTCAAGTCACTTGTCTTTGCATATCAACTGGTGTaGTGTGTGCTAGGTTACTTC +
Preference number: 4 (lower is better)
Translates to: PTGILCTLLTTPLKSLVFAYQLV*CVLGYF
Trigger: GAAGTAACCTAGCACACAGCACACCAGTTGATATGC...AAAGACAAGTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATATTCCAGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR GCA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACACTTCATTCTGTCCTCTaGTTGGCATATCAACTGGTG +
Preference number: 4 (lower is better)
Translates to: GLLHQQSISDLPMAASETLHSVL*LAYQLV
Trigger: CACCAGTTGATATGCCAAGCAGAGGACAGAATGAAG...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR GCA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACACTCATCCCCACAAAATaGATTCTGAGGTTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GLLHQQSISDLPMAASETLIPTK*ILRFPG
Trigger: TCCTGGAAACCTCAGAATGCATTTTGTGGGGATGAG...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp CCTACTGGAATATTATGTACACTGCTGACCACCCCGCTCAAGTCACTTGTCTTTGTTGACATCGGAAGCTaGTCTTGTGTACTGGTACTT +
Preference number: 4 (lower is better)
Translates to: PTGILCTLLTTPLKSLVFVDIGS*SCVLVL
Trigger: AAGTACCAGTACACAAGACCAGCTTCCGATGTCAAC...AAAGACAAGTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATATTCCAGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACATTGACCTTCTTGGGATaGTGCCATTTTCCAAACTTG +
Preference number: 4 (lower is better)
Translates to: GLLHQQSISDLPMAASETLTFLG*CHFPNL
Trigger: CAAGTTTGGAAAATGGCATCATCCCAAGAAGGTCAA...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp GGATGTCAGTACATAGTCTGTTTCACGGTCAGTAAACTGAAGTTTCTTTTATATAGTCAGCAGCGTGGCTaGGCTGCCCAGCAATATCTG +
Preference number: 4 (lower is better)
Translates to: GCQYIVCFTVSKLKFLLYSQQRG*AAQQYL
Trigger: CAGATATTGCTGGGCAGCTCAGCCACGCTGCTGACT...ATATAAAAGAAACTTCAGTTTACTGACCGTGAAACAGACTATGTACTGACATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACTCACTGCCGGTCCCATaGAGCACAAGATCAGGCATG +
Preference number: 4 (lower is better)
Translates to: QTDQKRSPINFSYGASNDSLPVP*STRSGM
Trigger: CATGCCTGATCTTGTGCTTCATGGGACCGGCAGTGA...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACGAGCTGAGCCACAGGTaGGGTTCCTTCTCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: QTDQKRSPINFSYGASNDELSHR*GSFSLC
Trigger: ACAGAGAGAGAAGGAACCTCACCTGTGGCTCAGCTC...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp GGATGTCAGTACATAGTCTGTTTCACGGTCAGTAAACTGAAGTTTCTTTTATATGCGGCTAAGCCAGAATaGAGCCACTGGGTGGTGTAC +
Preference number: 4 (lower is better)
Translates to: GCQYIVCFTVSKLKFLLYAAKPE*SHWVVY
Trigger: GTACACCACCCAGTGGCTTCATTCTGGCTTAGCCGC...ATATAAAAGAAACTTCAGTTTACTGACCGTGAAACAGACTATGTACTGACATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp GGATGTCAGTACATAGTCTGTTTCACGGTCAGTAAACTGAAGTTTCTTTTATATCTGTTGGTGGTAGGATaGGGGGTACAAGAGCGGGCT +
Preference number: 4 (lower is better)
Translates to: GCQYIVCFTVSKLKFLLYLLVVG*GVQERA
Trigger: AGCCCGCTCTTGTACCCCCCATCCTACCACCAACAG...ATATAAAAGAAACTTCAGTTTACTGACCGTGAAACAGACTATGTACTGACATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACGACCCAGATCTAGCATaGCTGAAGCGCAGGCTTCGT +
Preference number: 4 (lower is better)
Translates to: QTDQKRSPINFSYGASNDDPDLA*LKRRLR
Trigger: ACGAAGCCTGCGCTTCAGCCATGCTAGATCTGGGTC...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACGATCAGGCATGTATGTaGGGCAGTAGCCCGCCAGAA +
Preference number: 4 (lower is better)
Translates to: QTDQKRSPINFSYGASNDDQACM*GSSPPE
Trigger: TTCTGGCGGGCTACTGCCCCACATACATGCCTGATC...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACAACCTCCTCAATCTTTTaGACAGCTTTAGAGTCAAAC +
Preference number: 4 (lower is better)
Translates to: GLLHQQSISDLPMAASETTSSIF*TALESN
Trigger: GTTTGACTCTAAAGCTGTTCAAAAGATTGAGGAGGT...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp GGATGTCAGTACATAGTCTGTTTCACGGTCAGTAAACTGAAGTTTCTTTTATATTGGTCACCTTCACCATaGTTGCCACTCCAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: GCQYIVCFTVSKLKFLLYWSPSP*LPLQVS
Trigger: GCTGACCTGGAGTGGCAATCATGGTGAAGGTGACCA...ATATAAAAGAAACTTCAGTTTACTGACCGTGAAACAGACTATGTACTGACATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp GGATGTCAGTACATAGTCTGTTTCACGGTCAGTAAACTGAAGTTTCTTTTATATACAGCTGGGAAGTCTTaGAGAGCCATCTTGCGGTGC +
Preference number: 4 (lower is better)
Translates to: GCQYIVCFTVSKLKFLLYTAGKS*RAILRC
Trigger: GCACCGCAAGATGGCTCTTCAAGACTTCCCAGCTGT...ATATAAAAGAAACTTCAGTTTACTGACCGTGAAACAGACTATGTACTGACATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp CCTACTGGAATATTATGTACACTGCTGACCACCCCGCTCAAGTCACTTGTCTTTAAGGAAGAACTGTCCTaGGCTTTAGCTTATAAGAGT +
Preference number: 4 (lower is better)
Translates to: PTGILCTLLTTPLKSLVFKEELS*ALAYKS
Trigger: ACTCTTATAAGCTAAAGCTCAGGACAGTTCTTCCTT...AAAGACAAGTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATATTCCAGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACACTCTTCTCATGCTTTTaGCATCACAGAGAGCTTATT +
Preference number: 4 (lower is better)
Translates to: GLLHQQSISDLPMAASETLFSCF*HHRELI
Trigger: AATAAGCTCTCTGTGATGTCAAAAGCATGAGAAGAG...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACACACAACAGCAAACAATaGTGTCATGGAACTACAGAA +
Preference number: 4 (lower is better)
Translates to: GLLHQQSISDLPMAASETHNSKQ*CHGTTE
Trigger: TTCTGTAGTTCCATGACATCATTGTTTGCTGTTGTG...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACAACCCTGGAAGGTGGTaGATGAGGGAAAGTGCCCAA +
Preference number: 4 (lower is better)
Translates to: QTDQKRSPINFSYGASNDNPGRW*MRESAQ
Trigger: TTGGGCACTTTCCCTCATTCACCACCTTCCAGGGTT...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp GGATGTCAGTACATAGTCTGTTTCACGGTCAGTAAACTGAAGTTTCTTTTATATGACAGCCCCCACATGTaGCCCACCTGTAGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: GCQYIVCFTVSKLKFLLYDSPHM*PTCSFP
Trigger: TGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTC...ATATAAAAGAAACTTCAGTTTACTGACCGTGAAACAGACTATGTACTGACATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR GCA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACAACTGTGGGAAGAGATaGTGCTGCTGCTACTGCTGC +
Preference number: 4 (lower is better)
Translates to: QTDQKRSPINFSYGASNDNCGKR*CCCYCC
Trigger: GCAGCAGTAGCAGCAGCAGCATCTCTTCCCACAGTT...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR GCA 90 bp GGATGTCAGTACATAGTCTGTTTCACGGTCAGTAAACTGAAGTTTCTTTTATATGGTCTCTACTGTCAGTaGCCTCTGGGCACTCAGGAA +
Preference number: 4 (lower is better)
Translates to: GCQYIVCFTVSKLKFLLYGLYCQ*PLGTQE
Trigger: TTCCTGAGTGCCCAGAGGGCACTGACAGTAGAGACC...ATATAAAAGAAACTTCAGTTTACTGACCGTGAAACAGACTATGTACTGACATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR GCA 90 bp GGATGTCAGTACATAGTCTGTTTCACGGTCAGTAAACTGAAGTTTCTTTTATATTCGGCCACCAGGCACTaGTTCAGCTTCTCATCACTG +
Preference number: 4 (lower is better)
Translates to: GCQYIVCFTVSKLKFLLYSATRH*FSFSSL
Trigger: CAGTGATGAGAAGCTGAAGCAGTGCCTGGTGGCCGA...ATATAAAAGAAACTTCAGTTTACTGACCGTGAAACAGACTATGTACTGACATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR GCA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACACACAAGGCAATCTGTTaGAACAGCTTAGTGTTTAGT +
Preference number: 4 (lower is better)
Translates to: GLLHQQSISDLPMAASETHKAIC*NSLVFS
Trigger: ACTAAACACTAAGCTGTTGCAACAGATTGCCTTGTG...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR GCA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACAGATTCTTGGGTTTATTaGACCAACAATCCATCTCTG +
Preference number: 4 (lower is better)
Translates to: GLLHQQSISDLPMAASETDSWVY*TNNPSL
Trigger: CAGAGATGGATTGTTGGTGCAATAAACCCAAGAATC...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACAGGTATCTATTCAGACTaGTCAAAAACGAAGTCCTAT +
Preference number: 4 (lower is better)
Translates to: GLLHQQSISDLPMAASETGIYSD*SKTKSY
Trigger: ATAGGACTTCGTTTTTGATCAGTCTGAATAGATACC...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR GCA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACCCATGTCGTTTCTGCTaGCTCTGTCCTCTGCAAAAC +
Preference number: 4 (lower is better)
Translates to: QTDQKRSPINFSYGASNDPCRFC*LCPLQN
Trigger: GTTTTGCAGAGGACAGAGGCAGCAGAAACGACATGG...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR GCA 90 bp GGATGTCAGTACATAGTCTGTTTCACGGTCAGTAAACTGAAGTTTCTTTTATATCCCAGCAATATCTGCTaGCATGTCGTTTCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: GCQYIVCFTVSKLKFLLYPSNIC*HVVSAA
Trigger: GGCAGCAGAAACGACATGGCAGCAGATATTGCTGGG...ATATAAAAGAAACTTCAGTTTACTGACCGTGAAACAGACTATGTACTGACATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR GCA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACCTGCCCAGCAATATCTaGTGCCATGTCGTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: QTDQKRSPINFSYGASNDLPSNI*CHVVSA
Trigger: AGCAGAAACGACATGGCAGCAGATATTGCTGGGCAG...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR GCA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACAGACTGTACACTTTGCTaGTACAAACTACATCTTGAT +
Preference number: 4 (lower is better)
Translates to: GLLHQQSISDLPMAASETDCTLC*YKLHLD
Trigger: ATCAAGATGTAGTTTGTAGCAGCAAAGTGTACAGTC...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR GCA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACATCAGACTGTACACTTTaGTGCTACAAACTACATCTT +
Preference number: 4 (lower is better)
Translates to: GLLHQQSISDLPMAASETSDCTL*CYKLHL
Trigger: AAGATGTAGTTTGTAGCAGCAAAGTGTACAGTCTGA...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACACACTGCTGCTTCCCTaGCAGCACTTGGCTGATATT +
Preference number: 4 (lower is better)
Translates to: QTDQKRSPINFSYGASNDTLLLP*QHLADI
Trigger: AATATCAGCCAAGTGCTGCCAGGGAAGCAGCAGTGT...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp CCTACTGGAATATTATGTACACTGCTGACCACCCCGCTCAAGTCACTTGTCTTTGAAAAGAAGAAGTCCTaGAAATTCCTTTGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PTGILCTLLTTPLKSLVFEKKKS*KFLCAS
Trigger: AGAAGCACAAAGGAATTTCCAGGACTTCTTCTTTTC...AAAGACAAGTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATATTCCAGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp GGATGTCAGTACATAGTCTGTTTCACGGTCAGTAAACTGAAGTTTCTTTTATATTGGCTCATCCAGGACTaGATGATGGACTGTGTGGAC +
Preference number: 4 (lower is better)
Translates to: GCQYIVCFTVSKLKFLLYWLIQD*MMDCVD
Trigger: GTCCACACAGTCCATCATCCAGTCCTGGATGAGCCA...ATATAAAAGAAACTTCAGTTTACTGACCGTGAAACAGACTATGTACTGACATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACGAGACCAGGACATCCTaGCCTAGTTTCATGTTGTCC +
Preference number: 4 (lower is better)
Translates to: QTDQKRSPINFSYGASNDETRTS*PSFMLS
Trigger: GGACAACATGAAACTAGGCCAGGATGTCCTGGTCTC...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp CCTACTGGAATATTATGTACACTGCTGACCACCCCGCTCAAGTCACTTGTCTTTTCTTTTACTTTACCCTaGATGTCAGTACATAGTCTG +
Preference number: 4 (lower is better)
Translates to: PTGILCTLLTTPLKSLVFSFTLP*MSVHSL
Trigger: CAGACTATGTACTGACATCCAGGGTAAAGTAAAAGA...AAAGACAAGTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATATTCCAGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACAGCACACTTCGAAAAATaGATTGAAGCCTGTACAAAA +
Preference number: 4 (lower is better)
Translates to: GLLHQQSISDLPMAASETAHFEK*IEACTK
Trigger: TTTTGTACAGGCTTCAATCCATTTTTCGAAGTGTGC...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR CAA 72 bp CTGAAGATGGCACAATGTGGCTTTCTTTGCTTTACCTaGTCTAAAAAGCAAACTGTGACCTGGAATCCAAAG +
Preference number: 4 (lower is better)
Translates to: LKMAQCGFLCFT*SKKQTVTWNPK
Trigger: CTTTGGATTCCAGGTCACAGTTTGCTTTTTAGACAAGGTAAAGCAAAGAAAGCCACATTGTGCCATCTTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR GCA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACAGCTCACAGACAGCTTaGTGGTCCATCTTCATTCCT +
Preference number: 4 (lower is better)
Translates to: QTDQKRSPINFSYGASNDSSQTA*WSIFIP
Trigger: AGGAATGAAGATGGACCAGCAAGCTGTCTGTGAGCT...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR GCA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACAAGTCTATCTTCAAGATaGATGATGCAAAAATCAGCA +
Preference number: 4 (lower is better)
Translates to: GLLHQQSISDLPMAASETSLSSR*MMQKSA
Trigger: TGCTGATTTTTGCATCATGCATCTTGAAGATAGACT...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp GGATGTCAGTACATAGTCTGTTTCACGGTCAGTAAACTGAAGTTTCTTTTATATCCTAATTCTTTCACATaGACTCGTGTGTGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: GCQYIVCFTVSKLKFLLYPNSFT*TRVCPR
Trigger: CCGGGGACACACACGAGTCCATGTGAAAGAATTAGG...ATATAAAAGAAACTTCAGTTTACTGACCGTGAAACAGACTATGTACTGACATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACTCTCTGACCTACCCATaGCTGCATCTGAAACAAGGT +
Preference number: 4 (lower is better)
Translates to: QTDQKRSPINFSYGASNDSLTYP*LHLKQG
Trigger: ACCTTGTTTCAGATGCAGCCATGGGTAGGTCAGAGA...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp GGATGTCAGTACATAGTCTGTTTCACGGTCAGTAAACTGAAGTTTCTTTTATATTTTCCCCTAACATGTTaGCATCGGAAGCTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: GCQYIVCFTVSKLKFLLYFPLTC*HRKLVL
Trigger: CAAGACCAGCTTCCGATGTCAACATGTTAGGGGAAA...ATATAAAAGAAACTTCAGTTTACTGACCGTGAAACAGACTATGTACTGACATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp GGATGTCAGTACATAGTCTGTTTCACGGTCAGTAAACTGAAGTTTCTTTTATATGTAACTCATGGCAACTaGGCCAAACATCATTTCCCC +
Preference number: 4 (lower is better)
Translates to: GCQYIVCFTVSKLKFLLYVTHGN*AKHHFP
Trigger: GGGGAAATGATGTTTGGCTCAGTTGCCATGAGTTAC...ATATAAAAGAAACTTCAGTTTACTGACCGTGAAACAGACTATGTACTGACATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACTTTCTTCAGCCAAGCTaGATGTCTCATCAGTTGACC +
Preference number: 4 (lower is better)
Translates to: QTDQKRSPINFSYGASNDFLQPS*MSHQLT
Trigger: GGTCAACTGATGAGACATTCAGCTTGGCTGAAGAAA...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR GCA 90 bp GGATGTCAGTACATAGTCTGTTTCACGGTCAGTAAACTGAAGTTTCTTTTATATCAAACAAGACTTGTCTaGCTCTCCTGTCACAGTCCT +
Preference number: 4 (lower is better)
Translates to: GCQYIVCFTVSKLKFLLYQTRLV*LSCHSP
Trigger: AGGACTGTGACAGGAGAGGCAGACAAGTCTTGTTTG...ATATAAAAGAAACTTCAGTTTACTGACCGTGAAACAGACTATGTACTGACATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR GCA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACGTCAGACTCTGGAGATaGAAAGCTTCCAATCTGGAA +
Preference number: 4 (lower is better)
Translates to: QTDQKRSPINFSYGASNDVRLWR*KASNLE
Trigger: TTCCAGATTGGAAGCTTTGCATCTCCAGAGTCTGAC...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACCCTCCTAACCATAGCTaGATTAGAGCTACAGGTTTC +
Preference number: 4 (lower is better)
Translates to: QTDQKRSPINFSYGASNDPPNHS*IRATGF
Trigger: GAAACCTGTAGCTCTAATCCAGCTATGGTTAGGAGG...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp GGATGTCAGTACATAGTCTGTTTCACGGTCAGTAAACTGAAGTTTCTTTTATATAGCATGTTCACTGACTaGGAGGTACGTTTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: GCQYIVCFTVSKLKFLLYSMFTD*EVRFSE
Trigger: CTCAGAGAAACGTACCTCCCAGTCAGTGAACATGCT...ATATAAAAGAAACTTCAGTTTACTGACCGTGAAACAGACTATGTACTGACATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp GGATGTCAGTACATAGTCTGTTTCACGGTCAGTAAACTGAAGTTTCTTTTATATCTGGACTCGGAGACTTaGTTCTGCTATTTTCCTACA +
Preference number: 4 (lower is better)
Translates to: GCQYIVCFTVSKLKFLLYLDSET*FCYFPT
Trigger: TGTAGGAAAATAGCAGAATCAAGTCTCCGAGTCCAG...ATATAAAAGAAACTTCAGTTTACTGACCGTGAAACAGACTATGTACTGACATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACAACCTAAGTCTTCAATaGAGCATCAGCTTGACAGCA +
Preference number: 4 (lower is better)
Translates to: QTDQKRSPINFSYGASNDNLSLQ*SISLTA
Trigger: TGCTGTCAAGCTGATGCTTCATTGAAGACTTAGGTT...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp GGATGTCAGTACATAGTCTGTTTCACGGTCAGTAAACTGAAGTTTCTTTTATATAGATGTAGAGGAGCTTaGAGATGGGAAAGGTGTGAT +
Preference number: 4 (lower is better)
Translates to: GCQYIVCFTVSKLKFLLYRCRGA*RWERCD
Trigger: ATCACACCTTTCCCATCTCCAAGCTCCTCTACATCT...ATATAAAAGAAACTTCAGTTTACTGACCGTGAAACAGACTATGTACTGACATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACTATACGGATGTGTTTTaGCCAGCATGTTCACTGACT +
Preference number: 4 (lower is better)
Translates to: QTDQKRSPINFSYGASNDYTDVF*PACSLT
Trigger: AGTCAGTGAACATGCTGGCCAAAACACATCCGTATA...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
3UTR CAA 72 bp TATGTTTTCTCCAGTTTGGGGAGCTCATGCTTAAACTaGGAAGCAGTTTCCTACTGGAATATTATGTACACT +
Preference number: 4 (lower is better)
Translates to: YVFSSLGSSCLN*EAVSYWNIMYT
Trigger: AGTGTACATAATATTCCAGTAGGAAACTGCTTCCAAGTTTAAGCATGAGCTCCCCAAACTGGAGAAAACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp GGATGTCAGTACATAGTCTGTTTCACGGTCAGTAAACTGAAGTTTCTTTTATATCTGGCAGCACTTGGCTaGTATTTTAATAGGAACATC +
Preference number: 4 (lower is better)
Translates to: GCQYIVCFTVSKLKFLLYLAALG*YFNRNI
Trigger: GATGTTCCTATTAAAATATCAGCCAAGTGCTGCCAG...ATATAAAAGAAACTTCAGTTTACTGACCGTGAAACAGACTATGTACTGACATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp GGATGTCAGTACATAGTCTGTTTCACGGTCAGTAAACTGAAGTTTCTTTTATATTTCAGCCTGTTCATGTaGGATTCAAACAGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: GCQYIVCFTVSKLKFLLYFSLFM*DSNRGK
Trigger: TTTTCCCCTGTTTGAATCTCACATGAACAGGCTGAA...ATATAAAAGAAACTTCAGTTTACTGACCGTGAAACAGACTATGTACTGACATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp GGATGTCAGTACATAGTCTGTTTCACGGTCAGTAAACTGAAGTTTCTTTTATATCTAAAAAGCAAACTGTaGCCTGGAATCCAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: GCQYIVCFTVSKLKFLLYLKSKL*PGIQSL
Trigger: CAGACTTTGGATTCCAGGTCACAGTTTGCTTTTTAG...ATATAAAAGAAACTTCAGTTTACTGACCGTGAAACAGACTATGTACTGACATCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR GCA 90 bp GGATGTCAGTACATAGTCTGTTTCACGGTCAGTAAACTGAAGTTTCTTTTATATAGTTTGGGGAGCTCATaGTTAAACTTGGAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: GCQYIVCFTVSKLKFLLYSLGSS*LNLEAV
Trigger: AACTGCTTCCAAGTTTAAGCATGAGCTCCCCAAACT...ATATAAAAGAAACTTCAGTTTACTGACCGTGAAACAGACTATGTACTGACATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACACTAATCATCAGTTGTaGAGGAGAACGTATGTAGTG +
Preference number: 4 (lower is better)
Translates to: QTDQKRSPINFSYGASNDTNHQL*RRTYVV
Trigger: CACTACATACGTTCTCCTCCACAACTGATGATTAGT...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACCCCAAATTAGGATCTTaGTTGATGTACTCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: QTDQKRSPINFSYGASNDPKLGS*LMYSKL
Trigger: CAGCTTTGAGTACATCAACCAAGATCCTAATTTGGG...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACAAGCAAACTGTGACCTaGAATCCAAAGTCTGTATTC +
Preference number: 4 (lower is better)
Translates to: QTDQKRSPINFSYGASNDKQTVT*NPKSVF
Trigger: GAATACAGACTTTGGATTCCAGGTCACAGTTTGCTT...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR TCA 90 bp GGATGTCAGTACATAGTCTGTTTCACGGTCAGTAAACTGAAGTTTCTTTTATATCCAAAGTCTGTATTCTaGTTGTTGTCTCAGAATAGC +
Preference number: 4 (lower is better)
Translates to: GCQYIVCFTVSKLKFLLYPKSVF*LLSQNS
Trigger: GCTATTCTGAGACAACAATCAGAATACAGACTTTGG...ATATAAAAGAAACTTCAGTTTACTGACCGTGAAACAGACTATGTACTGACATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR GCA 90 bp GGATGTCAGTACATAGTCTGTTTCACGGTCAGTAAACTGAAGTTTCTTTTATATCATAGCCTTTTCAATTaGACTCTTCAGCCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: GCQYIVCFTVSKLKFLLYHSLFN*TLQPVH
Trigger: ATGAACAGGCTGAAGAGTGCAATTGAAAAGGCTATG...ATATAAAAGAAACTTCAGTTTACTGACCGTGAAACAGACTATGTACTGACATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR GCA 90 bp GGATGTCAGTACATAGTCTGTTTCACGGTCAGTAAACTGAAGTTTCTTTTATATGTGCTAAAGATGTTTTaGTTTGCTAGCTTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GCQYIVCFTVSKLKFLLYVLKMF*FASLAP
Trigger: AGGAGCTAAGCTAGCAAAGCAAAACATCTTTAGCAC...ATATAAAAGAAACTTCAGTTTACTGACCGTGAAACAGACTATGTACTGACATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACTATAGAGCTGTAAAATaGACTGAAGCAAACTGGACA +
Preference number: 4 (lower is better)
Translates to: QTDQKRSPINFSYGASNDYRAVK*TEANWT
Trigger: TGTCCAGTTTGCTTCAGTCCATTTTACAGCTCTATA...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACGAAGCAGTTTCCTACTaGAATATTATGTACACTGCT +
Preference number: 4 (lower is better)
Translates to: QTDQKRSPINFSYGASNDEAVSY*NIMYTA
Trigger: AGCAGTGTACATAATATTCCAGTAGGAAACTGCTTC...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp GGATGTCAGTACATAGTCTGTTTCACGGTCAGTAAACTGAAGTTTCTTTTATATGAAGATGGCACAATGTaGCTTTCTTTGCTTTACCTT +
Preference number: 4 (lower is better)
Translates to: GCQYIVCFTVSKLKFLLYEDGTM*LSLLYL
Trigger: AAGGTAAAGCAAAGAAAGCCACATTGTGCCATCTTC...ATATAAAAGAAACTTCAGTTTACTGACCGTGAAACAGACTATGTACTGACATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CCA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACTTCTTTGTTGATTCATaGGTAACAAATGGCCTAAAG +
Preference number: 4 (lower is better)
Translates to: QTDQKRSPINFSYGASNDFFVDS*VTNGLK
Trigger: CTTTAGGCCATTTGTTACCCATGAATCAACAAAGAA...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS TCA 90 bp GCGGCGCGGCCGCCCAGCCTTGCGGGAGCGCGGGGCCGCTGCGACTaGGTAACTCTGCTCGGCGCCGGAGCCGCCGGCTGCCGGTCATAT +
Preference number: 5 (lower is better)
Translates to: AARPPSLAGARGRCD*VTLLGAGAAGCRSY
Trigger: ATATGACCGGCAGCCGGCGGCTCCGGCGCCGAGCAGAGTTACTCAGTCGCAGCGGCCCCGCGCTCCCGCAAGGCTGGGCGGCCGCGCCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS CCA 90 bp CCTCTAGTGGCCTCCAGCCTCCTCCCTCCCGTTCCTCCTGCACCGTaGGAGGCTGTGCCCAAGTCAGCAGCGTGGCTGAGCTGCCCAGCA +
Preference number: 5 (lower is better)
Translates to: PLVASSLLPPVPPAP*EAVPKSAAWLSCPA
Trigger: TGCTGGGCAGCTCAGCCACGCTGCTGACTTGGGCACAGCCTCCCACGGTGCAGGAGGAACGGGAGGGAGGAGGCTGGAGGCCACTAGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS CCA 90 bp GGATATTCGCACCAGCCACGAGGCCAGGGCCCCGCTGGACACACCTaGGGGCAACAGGCTCCAGCACAGGTCCTTCCGCAGCCTTCACAT +
Preference number: 5 (lower is better)
Translates to: GYSHQPRGQGPAGHT*GQQAPAQVLPQPSH
Trigger: ATGTGAAGGCTGCGGAAGGACCTGTGCTGGAGCCTGTTGCCCCCAGGTGTGTCCAGCGGGGCCCTGGCCTCGTGGCTGGTGCGAATATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS CCA 90 bp GAACATGACCAACTAAAGGCGGGTCCTTCCTTAGGAGCCCTGCCCTaGGCAGACGCCGCCGCGGAGCTGCCGCTGCTGCCCCTTTTGTTG +
Preference number: 5 (lower is better)
Translates to: EHDQLKAGPSLGALP*ADAAAELPLLPLLL
Trigger: CAACAAAAGGGGCAGCAGCGGCAGCTCCGCGGCGGCGTCTGCCCAGGGCAGGGCTCCTAAGGAAGGACCCGCCTTTAGTTGGTCATGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264433.11
ENST00000504704.6
CDS GCA 90 bp ATACAAACCTCTAGTGGCCTCCAGCCTCCTCCCTCCCGTTCCTCCTaGACCGTGGGAGGCTGTGCCCAAGTCAGCAGCGTGGCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: IQTSSGLQPPPSRSS*TVGGCAQVSSVAEL
Trigger: CAGCTCAGCCACGCTGCTGACTTGGGCACAGCCTCCCACGGTGCAGGAGGAACGGGAGGGAGGAGGCTGGAGGCCACTAGAGGTTTGTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS CCA 90 bp CCAAGGACCCTCCAGTCCTGTCACCACCGTGACCCAGATCTAGCATaGCTGAAGCGCAGGCTTCGTCGTCACTGTCTCCCAGGGCGCTAT +
Preference number: 5 (lower is better)
Translates to: PRTLQSCHHRDPDLA*LKRRLRRHCLPGRY
Trigger: ATAGCGCCCTGGGAGACAGTGACGACGAAGCCTGCGCTTCAGCCATGCTAGATCTGGGTCACGGTGGTGACAGGACTGGAGGGTCCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS TCA 90 bp AGAGGCAGCTCCACTTCCAAGGACCCTCCAGTCCTGTCACCACCGTaGCCCAGATCTAGCATGGCTGAAGCGCAGGCTTCGTCGTCACTG +
Preference number: 5 (lower is better)
Translates to: RGSSTSKDPPVLSPP*PRSSMAEAQASSSL
Trigger: CAGTGACGACGAAGCCTGCGCTTCAGCCATGCTAGATCTGGGTCACGGTGGTGACAGGACTGGAGGGTCCTTGGAAGTGGAGCTGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS GCA 90 bp CTCCCAGCACCAGGAACAGCATCACTCACACATCTGGCAGAGTCTTaGCAGCTCTCTGGCTGGTTTGTGGTGTTCGCTGTGCCGCCGCAC +
Preference number: 5 (lower is better)
Translates to: LPAPGTASLTHLAES*QLSGWFVVFAVPPH
Trigger: GTGCGGCGGCACAGCGAACACCACAAACCAGCCAGAGAGCTGGCAAGACTCTGCCAGATGTGTGAGTGATGCTGTTCCTGGTGCTGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512986.5
CDS GCA 90 bp TCTGATGCTGGCCCCAGGCACCCTGCGCTGCAAGCCTCAGAACCCTaGTCTGGCCTCCTGTTAGCTTCTTTGTCAGGTTTAAGACCCAGG +
Preference number: 5 (lower is better)
Translates to: SDAGPRHPALQASEP*SGLLLASLSGLRPR
Trigger: CCTGGGTCTTAAACCTGACAAAGAAGCTAACAGGAGGCCAGAGCAGGGTTCTGAGGCTTGCAGCGCAGGGTGCCTGGGGCCAGCATCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264433.11
ENST00000512986.5
CDS TCA 90 bp GGAAGGTTTCTCCCGGAGATGTCTGTCAGGGCAAGGCCAGGCCACTaGCCGGTCTGGCAGTCTTGTAGGCATCTCCACTTTCAACAGCTC +
Preference number: 5 (lower is better)
Translates to: GRFLPEMSVRARPGH*PVWQSCRHLHFQQL
Trigger: GAGCTGTTGAAAGTGGAGATGCCTACAAGACTGCCAGACCGGTCAGTGGCCTGGCCTTGCCCTGACAGACATCTCCGGGAGAAACCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS TCA 90 bp TATCAACTGGTGTGCTGTGTGCTGCAAAGAAAGAAGCACTCCGGGTaGGCCGGAGAGGTCCTCCTTCAGCTACCCCCTGCAGCAGTTTGC +
Preference number: 5 (lower is better)
Translates to: YQLVCCVLQRKKHSG*AGEVLLQLPPAAVC
Trigger: GCAAACTGCTGCAGGGGGTAGCTGAAGGAGGACCTCTCCGGCTCACCCGGAGTGCTTCTTTCTTTGCAGCACACAGCACACCAGTTGATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504715.1
CDS GCA 90 bp TGTGGACAAGGTCGGCCACCAGGCACTGCTTCAGCTTCTCATCACTaGCGGTCCCATGAAGCACAAGATCAGGCATGTATGTGGGGCAGT +
Preference number: 5 (lower is better)
Translates to: CGQGRPPGTASASHH*RSHEAQDQACMWGS
Trigger: ACTGCCCCACATACATGCCTGATCTTGTGCTTCATGGGACCGGCAGTGATGAGAAGCTGAAGCAGTGCCTGGTGGCCGACCTTGTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264433.11
ENST00000505130.1
CDS CCA 90 bp AGGAACAGCATCACTCACACATCTGGCAGAGTCTTGCCAGCTCTCTaGCTGGTTTGTGGTGTTCGCTGTGCCGCCGCACATCTCCTGAAC +
Preference number: 5 (lower is better)
Translates to: RNSITHTSGRVLPAL*LVCGVRCAAAHLLN
Trigger: GTTCAGGAGATGTGCGGCGGCACAGCGAACACCACAAACCAGCCAGAGAGCTGGCAAGACTCTGCCAGATGTGTGAGTGATGCTGTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512986.5
CDS CCA 90 bp TTCTTTGTCAGGTTTAAGACCCAGGTCTCTACTGTCAGTGCCCTCTaGGCACTCAGGAAACCCTGTCGGCCAGGGGTTGTGTCTCTCTGC +
Preference number: 5 (lower is better)
Translates to: FFVRFKTQVSTVSAL*ALRKPCRPGVVSLC
Trigger: GCAGAGAGACACAACCCCTGGCCGACAGGGTTTCCTGAGTGCCCAGAGGGCACTGACAGTAGAGACCTGGGTCTTAAACCTGACAAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264433.11
ENST00000512986.5
CDS CCA 90 bp TCTCATCACTGCCGGTCCCATGAAGCACAAGATCAGGCATGTATGTaGGGCAGTAGCCCGCCAGAAGTGAGCGGCCAAAGTTCCTTACAT +
Preference number: 5 (lower is better)
Translates to: SHHCRSHEAQDQACM*GSSPPEVSGQSSLH
Trigger: ATGTAAGGAACTTTGGCCGCTCACTTCTGGCGGGCTACTGCCCCACATACATGCCTGATCTTGTGCTTCATGGGACCGGCAGTGATGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS TCA 90 bp AAGCACAAGATCAGGCATGTATGTGGGGCAGTAGCCCGCCAGAAGTaGGCGGCCAAAGTTCCTTACATTCTGGGTGCTGATGCTCTGAGA +
Preference number: 5 (lower is better)
Translates to: KHKIRHVCGAVARQK*AAKVPYILGADALR
Trigger: TCTCAGAGCATCAGCACCCAGAATGTAAGGAACTTTGGCCGCTCACTTCTGGCGGGCTACTGCCCCACATACATGCCTGATCTTGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CAA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGCATTCTGTCCTCTGCTaGGCATATCAACTGGTGTGC +
Preference number: 5 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQHSVLC*AYQLVC
Trigger: GCACACCAGTTGATATGCCAAGCAGAGGACAGAATG...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CAA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGAGACAGCTTCAGCTATaGGCTCATCCAGGACTGGAT +
Preference number: 5 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQRQLQL*AHPGLD
Trigger: ATCCAGTCCTGGATGAGCCAATAGCTGAAGCTGTCT...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS GCA 90 bp AGTCCTAAAGAAGTTCTTGGAACAACAGTCACCGAGTCTACACACTaGCACCAACCACGGTTTAGGGCAGCGGTCCCCAACCTTTTCCAG +
Preference number: 5 (lower is better)
Translates to: SPKEVLGTTVTESTH*HQPRFRAAVPNLFQ
Trigger: CTGGAAAAGGTTGGGGACCGCTGCCCTAAACCGTGGTTGGTGGCAGTGTGTAGACTCGGTGACTGTTGTTCCAAGAACTTCTTTAGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505445.1
CDS-3UTR CAA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGAGAGTCAAACAAGACTaGTCTGCCTCTCCTGTCACA +
Preference number: 5 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQRVKQD*SASPVT
Trigger: TGTGACAGGAGAGGCAGACAAGTCTTGTTTGACTCT...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CAA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACACCTGTCGGCCAGGGGTaGTGTCTCTCTGCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: GLLHQQSISDLPMAASETPVGQG*CLSAAV
Trigger: AACAGCAGCAGAGAGACACAACCCCTGGCCGACAGG...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS GCA 90 bp AAAGTATTCGCTGGACTAAGTCCTTCTGCTTCCCTACCACTACGGTaGGAGTCAGTCTCACTGGAGAGCCTATGGCTCCGTAAAGATCAC +
Preference number: 5 (lower is better)
Translates to: KVFAGLSPSASLPLR*ESVSLESLWLRKDH
Trigger: GTGATCTTTACGGAGCCATAGGCTCTCCAGTGAGACTGACTCGCACCGTAGTGGTAGGGAAGCAGAAGGACTTAGTCCAGCGAATACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264433.11
ENST00000512986.5
CDS CCA 90 bp CAGCATGTCTCTAGAACAGAAGAAACGGTGACCAGGTCAGCTGGCTaGTCCTCCCACTGTCACAGGACAGATTTACTTCCACAAACCCTT +
Preference number: 5 (lower is better)
Translates to: QHVSRTEETVTRSAG*SSHCHRTDLLPQTL
Trigger: AAGGGTTTGTGGAAGTAAATCTGTCCTGTGACAGTGGGAGGACCAGCCAGCTGACCTGGTCACCGTTTCTTCTGTTCTAGAGACATGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504704.6
CDS-3UTR CAA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGTTATACGGATGTGTTTaGGCCAGCATGTTCACTGAC +
Preference number: 5 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQLYGCV*ASMFTD
Trigger: GTCAGTGAACATGCTGGCCAAAACACATCCGTATAA...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS GCA 90 bp ATTAATATGTGTGGGTCACACTGTACTCAGCATTCCACACAAACCTaGAAAGAAAGAAGCACTCCGGGTGAGCCGGAGAGGTCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: INMCGSHCTQHSTQT*KERSTPGEPERSSF
Trigger: GAAGGAGGACCTCTCCGGCTCACCCGGAGTGCTTCTTTCTTTGCAGGTTTGTGTGGAATGCTGAGTACAGTGTGACCCACACATATTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504704.6
CDS-3UTR CAA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGCAGGTTCAGCTATCCTaGGAACAGAATATAAGTTCC +
Preference number: 5 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQQVQLS*EQNISS
Trigger: GGAACTTATATTCTGTTCCAAGGATAGCTGAACCTG...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS TCA 90 bp GAAGCTGGTCTTGTGTACTGGTACTTTGGAAGCTGTTCCTTAGCATaGTGTGAAGATCCCCCAGAAGAACTGTGGGAAGAGATGCTGCTG +
Preference number: 5 (lower is better)
Translates to: EAGLVYWYFGSCSLA*CEDPPEELWEEMLL
Trigger: CAGCAGCATCTCTTCCCACAGTTCTTCTGGGGGATCTTCACATCATGCTAAGGAACAGCTTCCAAAGTACCAGTACACAAGACCAGCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264433.11
ENST00000504704.6
ENST00000512986.5
CDS CCA 90 bp GAAGAGATGCTGCTGCTGCTACTGCTGCTGACACTGCTGCTTCCCTaGCAGCACTTGGCTGATATTTTAATAGGAACATCCTCTGTTTTC +
Preference number: 5 (lower is better)
Translates to: EEMLLLLLLLTLLLP*QHLADILIGTSSVF
Trigger: GAAAACAGAGGATGTTCCTATTAAAATATCAGCCAAGTGCTGCCAGGGAAGCAGCAGTGTCAGCAGCAGTAGCAGCAGCAGCATCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264433.11
ENST00000504704.6
ENST00000512986.5
CDS-3UTR CAA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGCACCTCCTCAATCTTTaGAACAGCTTTAGAGTCAAA +
Preference number: 5 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQHLLNL*NSFRVK
Trigger: TTTGACTCTAAAGCTGTTCAAAAGATTGAGGAGGTG...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CAA 90 bp CCTACTGGAATATTATGTACACTGCTGACCACCCCGCTCAAGTCACTTGTCTTTAACAGAGGCAGGTCGTaGGATTCAATCCCCAGTACG +
Preference number: 5 (lower is better)
Translates to: PTGILCTLLTTPLKSLVFNRGRS*DSIPST
Trigger: CGTACTGGGGATTGAATCCAACGACCTGCCTCTGTT...AAAGACAAGTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATATTCCAGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CAA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGTCCCACACAATGACATaGGTATCTATTCAGACTGAT +
Preference number: 5 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQSHTMT*VSIQTD
Trigger: ATCAGTCTGAATAGATACCAATGTCATTGTGTGGGA...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS TCA 90 bp TTATTAACACAAGAGCAGAGTTGCACAGAGTGGGTTAAAAGGCTCTaGGGCTACACAGGAGCACAAGGACCTTGGAGTAGTGTGGACAGA +
Preference number: 5 (lower is better)
Translates to: LLTQEQSCTEWVKRL*GYTGAQGPWSSVDR
Trigger: TCTGTCCACACTACTCCAAGGTCCTTGTGCTCCTGTGTAGCCTCAGAGCCTTTTAACCCACTCTGTGCAACTCTGCTCTTGTGTTAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504704.6
CDS-3UTR CAA 90 bp CTGAGTGTCACGGAGACAGCCCCCACATGTGACCCACCTGTAGTTTTCCAACAGAGGACCCAAACTATTTaGATTTGTGTTCAGTTTTCC +
Preference number: 5 (lower is better)
Translates to: LSVTETAPTCDPPVVFQQRTQTI*ICVQFS
Trigger: GGAAAACTGAACACAAATCAAAATAGTTTGGGTCCT...CTGTTGGAAAACTACAGGTGGGTCACATGTGGGGGCTGTCTCCGTGACACTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CAA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACAAGAAGTGTAAACTCCTaGAGAAAGCGCTGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: GLLHQQSISDLPMAASETRSVNS*RKRWQS
Trigger: GCTCTGCCAGCGCTTTCTCAAGGAGTTTACACTTCT...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CAA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACAAAGTTGGCCTTCTTGTaGTCATCCCCACAGGGGATA +
Preference number: 5 (lower is better)
Translates to: GLLHQQSISDLPMAASETKLAFL*SSPQGI
Trigger: TATCCCCTGTGGGGATGACAACAAGAAGGCCAACTT...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS TCA 90 bp GCTGTTATGATCTTGCTCCCATTTAAAACTTGGTCACCTTCACCATaGTTGCCACTCCAGGTCAGCTGGTTCTCTTGTAGCTCAGAGCAA +
Preference number: 5 (lower is better)
Translates to: AVMILLPFKTWSPSP*LPLQVSWFSCSSEQ
Trigger: TTGCTCTGAGCTACAAGAGAACCAGCTGACCTGGAGTGGCAATCATGGTGAAGGTGACCAAGTTTTAAATGGGAGCAAGATCATAACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264433.11
ENST00000512986.5
CDS TCA 90 bp TTTCAAAGTCAGACTCTGGAGATGCAAAGCTTCCAATCTGGAAAGTaGCCTTTTCTAAGGAAGGTTTCTCCCGGAGATGTCTGTCAGGGC +
Preference number: 5 (lower is better)
Translates to: FQSQTLEMQSFQSGK*PFLRKVSPGDVCQG
Trigger: GCCCTGACAGACATCTCCGGGAGAAACCTTCCTTAGAAAAGGTCACTTTCCAGATTGGAAGCTTTGCATCTCCAGAGTCTGACTTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS CCA 90 bp GTTCGCTGTGCCGCCGCACATCTCCTGAACGGTTTAATGTTCTTCTaGTTTATCCTGACCATAAACATGGACTTGGAGACAAATCCTGAA +
Preference number: 5 (lower is better)
Translates to: VRCAAAHLLNGLMFF*FILTINMDLETNPE
Trigger: TTCAGGATTTGTCTCCAAGTCCATGTTTATGGTCAGGATAAACCAGAAGAACATTAAACCGTTCAGGAGATGTGCGGCGGCACAGCGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512986.5
CDS-3UTR CAA 90 bp CCTACTGGAATATTATGTACACTGCTGACCACCCCGCTCAAGTCACTTGTCTTTATTTCCCCTAACATGTaGACATCGGAAGCTGGTCTT +
Preference number: 5 (lower is better)
Translates to: PTGILCTLLTTPLKSLVFISPNM*TSEAGL
Trigger: AAGACCAGCTTCCGATGTCAACATGTTAGGGGAAAT...AAAGACAAGTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATATTCCAGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CAA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACCTGCTGCCCCTTTTGTaGAAGAGCTTCTGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: QTDQKRSPINFSYGASNDLLPLL*KSFWSR
Trigger: CCTGCTCCAGAAGCTCTTCAACAAAAGGGGCAGCAG...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CAA 90 bp GGATGTCAGTACATAGTCTGTTTCACGGTCAGTAAACTGAAGTTTCTTTTATATCCGCTGCTGCCCCTTTaGTTGAAGAGCTTCTGGAGC +
Preference number: 5 (lower is better)
Translates to: GCQYIVCFTVSKLKFLLYPLLPL*LKSFWS
Trigger: GCTCCAGAAGCTCTTCAACAAAAGGGGCAGCAGCGG...ATATAAAAGAAACTTCAGTTTACTGACCGTGAAACAGACTATGTACTGACATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CAA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACCTGAAGTTGGCCTTCTaGTTGTCATCCCCACAGGGG +
Preference number: 5 (lower is better)
Translates to: QTDQKRSPINFSYGASNDLKLAF*LSSPQG
Trigger: CCCCTGTGGGGATGACAACAAGAAGGCCAACTTCAG...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CAA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACATATGTTTTCTCCAGTTaGGGGAGCTCATGCTTAAAC +
Preference number: 5 (lower is better)
Translates to: GLLHQQSISDLPMAASETYVFSS*GSSCLN
Trigger: GTTTAAGCATGAGCTCCCCAAACTGGAGAAAACATA...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CAA 90 bp CCTACTGGAATATTATGTACACTGCTGACCACCCCGCTCAAGTCACTTGTCTTTGCTACAAACTACATCTaGATGGGATTAAGAGGCTAC +
Preference number: 5 (lower is better)
Translates to: PTGILCTLLTTPLKSLVFATNYI*MGLRGY
Trigger: GTAGCCTCTTAATCCCATCAAGATGTAGTTTGTAGC...AAAGACAAGTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATATTCCAGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS CCA 90 bp TTACAAGAGAGGTTCATTGGCAGAATTTTCGAAACACCATGGATTTaGCCGCATTTGAAACCAATATCTGTGATCACAAGAGCCCCTTGG +
Preference number: 5 (lower is better)
Translates to: LQERFIGRIFETPWI*PHLKPISVITRAPW
Trigger: CCAAGGGGCTCTTGTGATCACAGATATTGGTTTCAAATGCGGCCAAATCCATGGTGTTTCGAAAATTCTGCCAATGAACCTCTCTTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504704.6
CDS-3UTR CAA 90 bp GGTTTATTGCACCAACAATCCATCTCTGACCTACCCATGGCTGCATCTGAAACATCCCAAATTAGGATCTaGGTTGATGTACTCAAAGCT +
Preference number: 5 (lower is better)
Translates to: GLLHQQSISDLPMAASETSQIRI*VDVLKA
Trigger: AGCTTTGAGTACATCAACCAAGATCCTAATTTGGGA...TGTTTCAGATGCAGCCATGGGTAGGTCAGAGATGGATTGTTGGTGCAATAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CAA 90 bp GGATGTCAGTACATAGTCTGTTTCACGGTCAGTAAACTGAAGTTTCTTTTATATCACAGCTGGGAAGTCTaGAAGAGCCATCTTGCGGTG +
Preference number: 5 (lower is better)
Translates to: GCQYIVCFTVSKLKFLLYHSWEV*KSHLAV
Trigger: CACCGCAAGATGGCTCTTCAAGACTTCCCAGCTGTG...ATATAAAAGAAACTTCAGTTTACTGACCGTGAAACAGACTATGTACTGACATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CAA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACTCCTCTGCAAAACCCTaGTCAGACTCGCCTTCATCC +
Preference number: 5 (lower is better)
Translates to: QTDQKRSPINFSYGASNDSSAKP*SDSPSS
Trigger: GGATGAAGGCGAGTCTGACAAGGGTTTTGCAGAGGA...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS TCA 90 bp CACTGTCACAGGACAGATTTACTTCCACAAACCCTTCTCTTCCTCTaGGTCTATACTCAACAGTCAAGCAAGCACATTACTAGTACAATG +
Preference number: 5 (lower is better)
Translates to: HCHRTDLLPQTLLFL*VYTQQSSKHITSTM
Trigger: CATTGTACTAGTAATGTGCTTGCTTGACTGTTGAGTATAGACTCAGAGGAAGAGAAGGGTTTGTGGAAGTAAATCTGTCCTGTGACAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504704.6
CDS CCA 90 bp GGAAAAGATGATGCTTATGGCAATTTTCTTCCTCCTAACCATAGCTaGATTAGAGCTACAGGTTTCTTCAGCCAAGCTGAATGTCTCATC +
Preference number: 5 (lower is better)
Translates to: GKDDAYGNFLPPNHS*IRATGFFSQAECLI
Trigger: GATGAGACATTCAGCTTGGCTGAAGAAACCTGTAGCTCTAATCCAGCTATGGTTAGGAGGAAGAAAATTGCCATAAGCATCATCTTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264433.11
ENST00000504715.1
ENST00000512986.5
CDS-3UTR CAA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACCCTTCAGTCCTGAAGTaGGCCTTCTTGTTGTCATCC +
Preference number: 5 (lower is better)
Translates to: QTDQKRSPINFSYGASNDPSVLK*AFLLSS
Trigger: GGATGACAACAAGAAGGCCAACTTCAGGACTGAAGG...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CAA 90 bp CCTACTGGAATATTATGTACACTGCTGACCACCCCGCTCAAGTCACTTGTCTTTACTTCGAAAAATGGATaGAAGCCTGTACAAAAAGCT +
Preference number: 5 (lower is better)
Translates to: PTGILCTLLTTPLKSLVFTSKNG*KPVQKA
Trigger: AGCTTTTTGTACAGGCTTCAATCCATTTTTCGAAGT...AAAGACAAGTGACTTGAGCGGGGTGGTCAGCAGTGTACATAATATTCCAGTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS TCA 90 bp TATATACAGTCTCCAAAACGGACAACTAAAGATACAAGGCTTCAGTaGCTTCTCTTTACAAGCTCCTCCAAGGTCTTGTTCATCCTGTGT +
Preference number: 5 (lower is better)
Translates to: YIQSPKRTTKDTRLQ*LLFTSSSKVLFILC
Trigger: ACACAGGATGAACAAGACCTTGGAGGAGCTTGTAAAGAGAAGTCACTGAAGCCTTGTATCTTTAGTTGTCCGTTTTGGAGACTGTATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505130.1
CDS GCA 90 bp CCTTGGATTTCTAGAGAGGCACAAGTAGGATTTTTCCTAAGAACCTaGACAGGATTTATTAATATGTGTGGGTCACACTGTACTCAGCAT +
Preference number: 5 (lower is better)
Translates to: PWISREAQVGFFLRT*TGFINMCGSHCTQH
Trigger: ATGCTGAGTACAGTGTGACCCACACATATTAATAAATCCTGTGCAGGTTCTTAGGAAAAATCCTACTTGTGCCTCTCTAGAAATCCAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504704.6
CDS CCA 90 bp AGACATTTACAAGAGAGGTTCATTGGCAGAATTTTCGAAACACCATaGATTTGGCCGCATTTGAAACCAATATCTGTGATCACAAGAGCC +
Preference number: 5 (lower is better)
Translates to: RHLQERFIGRIFETP*IWPHLKPISVITRA
Trigger: GGCTCTTGTGATCACAGATATTGGTTTCAAATGCGGCCAAATCCATGGTGTTTCGAAAATTCTGCCAATGAACCTCTCTTGTAAATGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504704.6
CDS CCA 90 bp GCTTACACTAGAGTATTAGCGAAGACATTTACAAGAGAGGTTCATTaGCAGAATTTTCGAAACACCATGGATTTGGCCGCATTTGAAACC +
Preference number: 5 (lower is better)
Translates to: AYTRVLAKTFTREVH*QNFRNTMDLAAFET
Trigger: GGTTTCAAATGCGGCCAAATCCATGGTGTTTCGAAAATTCTGCCAATGAACCTCTCTTGTAAATGTCTTCGCTAATACTCTAGTGTAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504704.6
CDS-3UTR CAA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACCATCGGAAGCTGGTCTaGTGTACTGGTACTTTGGAA +
Preference number: 5 (lower is better)
Translates to: QTDQKRSPINFSYGASNDHRKLV*CTGTLE
Trigger: TTCCAAAGTACCAGTACACAAGACCAGCTTCCGATG...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CAA 90 bp GGATGTCAGTACATAGTCTGTTTCACGGTCAGTAAACTGAAGTTTCTTTTATATCCCCGCTCAAGTCACTaGTCTTTATTCTGCCCAAAC +
Preference number: 5 (lower is better)
Translates to: GCQYIVCFTVSKLKFLLYPRSSH*SLFCPN
Trigger: GTTTGGGCAGAATAAAGACAAGTGACTTGAGCGGGG...ATATAAAAGAAACTTCAGTTTACTGACCGTGAAACAGACTATGTACTGACATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CAA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACAGCTCATGCTTAAACTaGGAAGCAGTTTCCTACTGG +
Preference number: 5 (lower is better)
Translates to: QTDQKRSPINFSYGASNDSSCLN*EAVSYW
Trigger: CCAGTAGGAAACTGCTTCCAAGTTTAAGCATGAGCT...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CAA 90 bp GGATGTCAGTACATAGTCTGTTTCACGGTCAGTAAACTGAAGTTTCTTTTATATTCATGCCTCACTAGCTaGCTTGGAAAAGCAAGATGC +
Preference number: 5 (lower is better)
Translates to: GCQYIVCFTVSKLKFLLYSCLTS*LGKARC
Trigger: GCATCTTGCTTTTCCAAGCAAGCTAGTGAGGCATGA...ATATAAAAGAAACTTCAGTTTACTGACCGTGAAACAGACTATGTACTGACATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CAA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACTGTCTTGCAAGTTATTaGTACTTCCACAGAAGCTGC +
Preference number: 5 (lower is better)
Translates to: QTDQKRSPINFSYGASNDCLASY*YFHRSC
Trigger: GCAGCTTCTGTGGAAGTACAAATAACTTGCAAGACA...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS CCA 90 bp TCTGAGTCTATACTCAACAGTCAAGCAAGCACATTACTAGTACAATaGGCTCAAGGAAGCTTCATTCTGGAAAGAAATTTCTTAACAAAC +
Preference number: 5 (lower is better)
Translates to: SESILNSQASTLLVQ*AQGSFILERNFLTN
Trigger: GTTTGTTAAGAAATTTCTTTCCAGAATGAAGCTTCCTTGAGCCCATTGTACTAGTAATGTGCTTGCTTGACTGTTGAGTATAGACTCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504704.6
CDS-3UTR CAA 90 bp GGATGTCAGTACATAGTCTGTTTCACGGTCAGTAAACTGAAGTTTCTTTTATATGCTCTTCTCATGCTTTaGACATCACAGAGAGCTTAT +
Preference number: 5 (lower is better)
Translates to: GCQYIVCFTVSKLKFLLYALLML*TSQRAY
Trigger: ATAAGCTCTCTGTGATGTCAAAAGCATGAGAAGAGC...ATATAAAAGAAACTTCAGTTTACTGACCGTGAAACAGACTATGTACTGACATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CAA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACAGAGCAGCAACATTCTaGGTCTATTTTTGTAGGCAA +
Preference number: 5 (lower is better)
Translates to: QTDQKRSPINFSYGASNDRAATF*VYFCRQ
Trigger: TTGCCTACAAAAATAGACCAAGAATGTTGCTGCTCT...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CAA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACTTTACTAATCATCAGTaGTGGAGGAGAACGTATGTA +
Preference number: 5 (lower is better)
Translates to: QTDQKRSPINFSYGASNDFTNHQ*WRRTYV
Trigger: TACATACGTTCTCCTCCACAACTGATGATTAGTAAA...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS-3UTR CAA 90 bp CAGACTGATCAAAAACGAAGTCCTATCAATTTCTCTTATGGAGCTTCAAATGACAAATTAGGATCTTGGTaGATGTACTCAAAGCTGTCT +
Preference number: 5 (lower is better)
Translates to: QTDQKRSPINFSYGASNDKLGSW*MYSKLS
Trigger: AGACAGCTTTGAGTACATCAACCAAGATCCTAATTT...GTCATTTGAAGCTCCATAAGAGAAATTGATAGGACTTCGTTTTTGATCAGTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS TCA 72 bp CCGCCCAGCCTTGCGGGAGCGCGGGGCCGCTGCGACTaGGTAACTCTGCTCGGCGCCGGAGCCGCCGGCTGC +
Preference number: 6 (lower is better)
Translates to: PPSLAGARGRCD*VTLLGAGAAGC
Trigger: GCAGCCGGCGGCTCCGGCGCCGAGCAGAGTTACTCAGTCGCAGCGGCCCCGCGCTCCCGCAAGGCTGGGCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS CCA 72 bp CAACTAAAGGCGGGTCCTTCCTTAGGAGCCCTGCCCTaGGCAGACGCCGCCGCGGAGCTGCCGCTGCTGCCC +
Preference number: 6 (lower is better)
Translates to: QLKAGPSLGALP*ADAAAELPLLP
Trigger: GGGCAGCAGCGGCAGCTCCGCGGCGGCGTCTGCCCAGGGCAGGGCTCCTAAGGAAGGACCCGCCTTTAGTTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264433.11
ENST00000504704.6
CDS CCA 72 bp CACCAGCCACGAGGCCAGGGCCCCGCTGGACACACCTaGGGGCAACAGGCTCCAGCACAGGTCCTTCCGCAG +
Preference number: 6 (lower is better)
Translates to: HQPRGQGPAGHT*GQQAPAQVLPQ
Trigger: CTGCGGAAGGACCTGTGCTGGAGCCTGTTGCCCCCAGGTGTGTCCAGCGGGGCCCTGGCCTCGTGGCTGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS CCA 72 bp GGGATATTCGCACCAGCCACGAGGCCAGGGCCCCGCTaGACACACCTGGGGGCAACAGGCTCCAGCACAGGT +
Preference number: 6 (lower is better)
Translates to: GIFAPATRPGPR*THLGATGSSTG
Trigger: ACCTGTGCTGGAGCCTGTTGCCCCCAGGTGTGTCCAGCGGGGCCCTGGCCTCGTGGCTGGTGCGAATATCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS CCA 72 bp AAACCTGCGGGTCCTGAGCCACATCAGCAGCCTCACTaGCCTCCAAGGAGGGGCCACAGGCCTTCACCCGTT +
Preference number: 6 (lower is better)
Translates to: KPAGPEPHQQPH*PPRRGHRPSPV
Trigger: AACGGGTGAAGGCCTGTGGCCCCTCCTTGGAGGCCAGTGAGGCTGCTGATGTGGCTCAGGACCCGCAGGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS CAA 72 bp CCCTCTGGGCACTCAGGAAACCCTGTCGGCCAGGGGTaGTGTCTCTCTGCTGCTGTTGGTGGTAGGATGGGG +
Preference number: 6 (lower is better)
Translates to: PSGHSGNPVGQG*CLSAAVGGRMG
Trigger: CCCCATCCTACCACCAACAGCAGCAGAGAGACACAACCCCTGGCCGACAGGGTTTCCTGAGTGCCCAGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264433.11
ENST00000512986.5
CDS TCA 72 bp CACCGTGGGAGGCTGTGCCCAAGTCAGCAGCGTGGCTaGGCTGCCCAGCAATATCTGCTGCCATGTCGTTTC +
Preference number: 6 (lower is better)
Translates to: HRGRLCPSQQRG*AAQQYLLPCRF
Trigger: GAAACGACATGGCAGCAGATATTGCTGGGCAGCTCAGCCACGCTGCTGACTTGGGCACAGCCTCCCACGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS TCA 72 bp CTCCCGGAGATGTCTGTCAGGGCAAGGCCAGGCCACTaGCCGGTCTGGCAGTCTTGTAGGCATCTCCACTTT +
Preference number: 6 (lower is better)
Translates to: LPEMSVRARPGH*PVWQSCRHLHF
Trigger: AAAGTGGAGATGCCTACAAGACTGCCAGACCGGTCAGTGGCCTGGCCTTGCCCTGACAGACATCTCCGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS TCA 72 bp TCCACTTCCAAGGACCCTCCAGTCCTGTCACCACCGTaGCCCAGATCTAGCATGGCTGAAGCGCAGGCTTCG +
Preference number: 6 (lower is better)
Translates to: STSKDPPVLSPP*PRSSMAEAQAS
Trigger: CGAAGCCTGCGCTTCAGCCATGCTAGATCTGGGTCACGGTGGTGACAGGACTGGAGGGTCCTTGGAAGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS TCA 72 bp GTGTGCTGTGTGCTGCAAAGAAAGAAGCACTCCGGGTaGGCCGGAGAGGTCCTCCTTCAGCTACCCCCTGCA +
Preference number: 6 (lower is better)
Translates to: VCCVLQRKKHSG*AGEVLLQLPPA
Trigger: TGCAGGGGGTAGCTGAAGGAGGACCTCTCCGGCTCACCCGGAGTGCTTCTTTCTTTGCAGCACACAGCACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504715.1
CDS GCA 72 bp TGGGAGGCTGTGCCCAAGTCAGCAGCGTGGCTGAGCTaGCCAGCAATATCTGCTGCCATGTCGTTTCTGCTG +
Preference number: 6 (lower is better)
Translates to: WEAVPKSAAWLS*PAISAAMSFLL
Trigger: CAGCAGAAACGACATGGCAGCAGATATTGCTGGGCAGCTCAGCCACGCTGCTGACTTGGGCACAGCCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS CAA 90 bp CGGGTGAGCCGGAGAGGTCCTCCTTCAGCTACCCCCTGCAGCAGTTaGCTGCTGCATGCTTGCAGCAGACCTAGGTTACTTCCAGTACGA +
Preference number: 6 (lower is better)
Translates to: RVSRRGPPSATPCSS*LLHACSRPRLLPVR
Trigger: TCGTACTGGAAGTAACCTAGGTCTGCTGCAAGCATGCAGCAGCAAACTGCTGCAGGGGGTAGCTGAAGGAGGACCTCTCCGGCTCACCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504715.1
CDS TCA 72 bp CCAGGTTTAAAAGGGCTCCTAGAAACCTGCGGGTCCTaGGCCACATCAGCAGCCTCACTGGCCTCCAAGGAG +
Preference number: 6 (lower is better)
Translates to: PGLKGLLETCGS*ATSAASLASKE
Trigger: CTCCTTGGAGGCCAGTGAGGCTGCTGATGTGGCTCAGGACCCGCAGGTTTCTAGGAGCCCTTTTAAACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS GCA 72 bp CAAGTCAGCAGCGTGGCTGAGCTGCCCAGCAATATCTaGTGCCATGTCGTTTCTGCTGCCTCTGTCCTCTGC +
Preference number: 6 (lower is better)
Translates to: QVSSVAELPSNI*CHVVSAASVLC
Trigger: GCAGAGGACAGAGGCAGCAGAAACGACATGGCAGCAGATATTGCTGGGCAGCTCAGCCACGCTGCTGACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS CCA 72 bp AGGTTTAAGACCCAGGTCTCTACTGTCAGTGCCCTCTaGGCACTCAGGAAACCCTGTCGGCCAGGGGTTGTG +
Preference number: 6 (lower is better)
Translates to: RFKTQVSTVSAL*ALRKPCRPGVV
Trigger: CACAACCCCTGGCCGACAGGGTTTCCTGAGTGCCCAGAGGGCACTGACAGTAGAGACCTGGGTCTTAAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264433.11
ENST00000512986.5
CDS CCA 72 bp TGCCGGTCCCATGAAGCACAAGATCAGGCATGTATGTaGGGCAGTAGCCCGCCAGAAGTGAGCGGCCAAAGT +
Preference number: 6 (lower is better)
Translates to: CRSHEAQDQACM*GSSPPEVSGQS
Trigger: ACTTTGGCCGCTCACTTCTGGCGGGCTACTGCCCCACATACATGCCTGATCTTGTGCTTCATGGGACCGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS CAA 72 bp CGGAGAGGTCCTCCTTCAGCTACCCCCTGCAGCAGTTaGCTGCTGCATGCTTGCAGCAGACCTAGAGATGGA +
Preference number: 6 (lower is better)
Translates to: RRGPPSATPCSS*LLHACSRPRDG
Trigger: TCCATCTCTAGGTCTGCTGCAAGCATGCAGCAGCAAACTGCTGCAGGGGGTAGCTGAAGGAGGACCTCTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504704.6
CDS TCA 72 bp GAGGTACGTTTCTCTGAGAAGGCTTTGATGGGAGGGTaGTCCACAGGCATGACAGTTGGGACCCAGGCCAGG +
Preference number: 6 (lower is better)
Translates to: EVRFSEKALMGG*STGMTVGTQAR
Trigger: CCTGGCCTGGGTCCCAACTGTCATGCCTGTGGATCACCCTCCCATCAAAGCCTTCTCAGAGAAACGTACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264433.11
ENST00000512986.5
CDS GCA 72 bp GCTGGACTAAGTCCTTCTGCTTCCCTACCACTACGGTaGGAGTCAGTCTCACTGGAGAGCCTATGGCTCCGT +
Preference number: 6 (lower is better)
Translates to: AGLSPSASLPLR*ESVSLESLWLR
Trigger: ACGGAGCCATAGGCTCTCCAGTGAGACTGACTCGCACCGTAGTGGTAGGGAAGCAGAAGGACTTAGTCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264433.11
ENST00000512986.5
CDS GCA 72 bp GTCAGCAGCGTGGCTGAGCTGCCCAGCAATATCTGCTaGCATGTCGTTTCTGCTGCCTCTGTCCTCTGCAAA +
Preference number: 6 (lower is better)
Translates to: VSSVAELPSNIC*HVVSAASVLCK
Trigger: TTTGCAGAGGACAGAGGCAGCAGAAACGACATGGCAGCAGATATTGCTGGGCAGCTCAGCCACGCTGCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS GCA 72 bp GGTCGGCCACCAGGCACTGCTTCAGCTTCTCATCACTaGCGGTCCCATGAAGCACAAGATCAGGCATGTATG +
Preference number: 6 (lower is better)
Translates to: GRPPGTASASHH*RSHEAQDQACM
Trigger: CATACATGCCTGATCTTGTGCTTCATGGGACCGGCAGTGATGAGAAGCTGAAGCAGTGCCTGGTGGCCGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264433.11
ENST00000505130.1
CDS GCA 72 bp GGAGAGGTCCTCCTTCAGCTACCCCCTGCAGCAGTTTaGTGCTGCATGCTTGCAGCAGACCTAGAGATGGAA +
Preference number: 6 (lower is better)
Translates to: GEVLLQLPPAAV*CCMLAADLEME
Trigger: TTCCATCTCTAGGTCTGCTGCAAGCATGCAGCAGCAAACTGCTGCAGGGGGTAGCTGAAGGAGGACCTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504704.6
CDS GCA 72 bp GAGGTCCTCCTTCAGCTACCCCCTGCAGCAGTTTGCTaGTGCATGCTTGCAGCAGACCTAGGTTACTTCCAG +
Preference number: 6 (lower is better)
Translates to: EVLLQLPPAAVC*CMLAADLGYFQ
Trigger: CTGGAAGTAACCTAGGTCTGCTGCAAGCATGCAGCAGCAAACTGCTGCAGGGGGTAGCTGAAGGAGGACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504715.1
CDS GCA 72 bp GGAGAGGTCCTCCTTCAGCTACCCCCTGCAGCAGTTTaGTGCTGCATGCTTGCAGCAGACCTAGGTTACTTC +
Preference number: 6 (lower is better)
Translates to: GEVLLQLPPAAV*CCMLAADLGYF
Trigger: GAAGTAACCTAGGTCTGCTGCAAGCATGCAGCAGCAAACTGCTGCAGGGGGTAGCTGAAGGAGGACCTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504715.1
CDS CCA 72 bp CCACTACGGTGCGAGTCAGTCTCACTGGAGAGCCTATaGCTCCGTAAAGATCACCCAGCTGTGCCCAAAGAG +
Preference number: 6 (lower is better)
Translates to: PLRCESVSLESL*LRKDHPAVPKE
Trigger: CTCTTTGGGCACAGCTGGGTGATCTTTACGGAGCCATAGGCTCTCCAGTGAGACTGACTCGCACCGTAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264433.11
ENST00000512986.5
CDS CCA 72 bp CTGCTTCCCTACCACTACGGTGCGAGTCAGTCTCACTaGAGAGCCTATGGCTCCGTAAAGATCACCCAGCTG +
Preference number: 6 (lower is better)
Translates to: LLPYHYGASQSH*RAYGSVKITQL
Trigger: CAGCTGGGTGATCTTTACGGAGCCATAGGCTCTCCAGTGAGACTGACTCGCACCGTAGTGGTAGGGAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264433.11
ENST00000512986.5
CDS CAA 72 bp CGGAGAGGTCCTCCTTCAGCTACCCCCTGCAGCAGTTaGCTGCTGCATGCTTGCAGCAGACCTAGGTTACTT +
Preference number: 6 (lower is better)
Translates to: RRGPPSATPCSS*LLHACSRPRLL
Trigger: AAGTAACCTAGGTCTGCTGCAAGCATGCAGCAGCAAACTGCTGCAGGGGGTAGCTGAAGGAGGACCTCTCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504715.1
CDS CAA 90 bp GTGAGGCCTGCATCCAGTCTGAGCAACGCCTGGCTGGCCCATTTGTaGAAGGTGTCATGTATCACAGGAGAAACCAGCAGGGTGCTCCTA +
Preference number: 6 (lower is better)
Translates to: VRPASSLSNAWLAHL*KVSCITGETSRVLL
Trigger: TAGGAGCACCCTGCTGGTTTCTCCTGTGATACATGACACCTTCAACAAATGGGCCAGCCAGGCGTTGCTCAGACTGGATGCAGGCCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504704.6
CDS CAA 90 bp CATGTGAGGCCTGCATCCAGTCTGAGCAACGCCTGGCTGGCCCATTaGTTGAAGGTGTCATGTATCACAGGAGAAACCAGCAGGGTGCTC +
Preference number: 6 (lower is better)
Translates to: HVRPASSLSNAWLAH*LKVSCITGETSRVL
Trigger: GAGCACCCTGCTGGTTTCTCCTGTGATACATGACACCTTCAACAAATGGGCCAGCCAGGCGTTGCTCAGACTGGATGCAGGCCTCACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504704.6
CDS TCA 72 bp AACTGTGGGAAGAGATGCTGCTGCTGCTACTGCTGCTaGCACTGCTGCTTCCCTGGCAGCACTTGGCTGATA +
Preference number: 6 (lower is better)
Translates to: NCGKRCCCCYCC*HCCFPGSTWLI
Trigger: TATCAGCCAAGTGCTGCCAGGGAAGCAGCAGTGTCAGCAGCAGTAGCAGCAGCAGCATCTCTTCCCACAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264433.11
ENST00000504704.6
ENST00000512986.5
CDS TCA 72 bp GCAGGCTTCGTCGTCACTGTCTCCCAGGGCGCTATCTaGGCTTTCATTTCGGGGAATGTCTCCTTCAGTCCT +
Preference number: 6 (lower is better)
Translates to: AGFVVTVSQGAI*AFISGNVSFSP
Trigger: AGGACTGAAGGAGACATTCCCCGAAATGAAAGCTCAGATAGCGCCCTGGGAGACAGTGACGACGAAGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS GCA 72 bp GCTGCCCAGCAATATCTGCTGCCATGTCGTTTCTGCTaGCTCTGTCCTCTGCAAAACCCTTGTCAGACTCGC +
Preference number: 6 (lower is better)
Translates to: AAQQYLLPCRFC*LCPLQNPCQTR
Trigger: GCGAGTCTGACAAGGGTTTTGCAGAGGACAGAGGCAGCAGAAACGACATGGCAGCAGATATTGCTGGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS GCA 72 bp GAGGTCCTCCTTCAGCTACCCCCTGCAGCAGTTTGCTaGTGCATGCTTGCAGCAGACCTAGAGATGGAAACA +
Preference number: 6 (lower is better)
Translates to: EVLLQLPPAAVC*CMLAADLEMET
Trigger: TGTTTCCATCTCTAGGTCTGCTGCAAGCATGCAGCAGCAAACTGCTGCAGGGGGTAGCTGAAGGAGGACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504704.6
CDS GCA 72 bp GAAGTTCTTGGAACAACAGTCACCGAGTCTACACACTaGCACCAACCACGGTTTAGGGCAGCGGTCCCCAAC +
Preference number: 6 (lower is better)
Translates to: EVLGTTVTESTH*HQPRFRAAVPN
Trigger: GTTGGGGACCGCTGCCCTAAACCGTGGTTGGTGGCAGTGTGTAGACTCGGTGACTGTTGTTCCAAGAACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505445.1
CDS TCA 72 bp ATCAGGCATGTATGTGGGGCAGTAGCCCGCCAGAAGTaGGCGGCCAAAGTTCCTTACATTCTGGGTGCTGAT +
Preference number: 6 (lower is better)
Translates to: IRHVCGAVARQK*AAKVPYILGAD
Trigger: ATCAGCACCCAGAATGTAAGGAACTTTGGCCGCTCACTTCTGGCGGGCTACTGCCCCACATACATGCCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS GCA 72 bp TGTGGGTCACACTGTACTCAGCATTCCACACAAACCTaGAAAGAAAGAAGCACTCCGGGTGAGCCGGAGAGG +
Preference number: 6 (lower is better)
Translates to: CGSHCTQHSTQT*KERSTPGEPER
Trigger: CCTCTCCGGCTCACCCGGAGTGCTTCTTTCTTTGCAGGTTTGTGTGGAATGCTGAGTACAGTGTGACCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504704.6
CDS GCA 72 bp CTTGCCAGCTCTCTGGCTGGTTTGTGGTGTTCGCTGTaGCGCCGCACATCTCCTGAACGGTTTAATGTTCTT +
Preference number: 6 (lower is better)
Translates to: LASSLAGLWCSL*RRTSPERFNVL
Trigger: AAGAACATTAAACCGTTCAGGAGATGTGCGGCGGCACAGCGAACACCACAAACCAGCCAGAGAGCTGGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512986.5
CDS CAA 72 bp GGAATGTCTCCTTCAGTCCTGAAGTTGGCCTTCTTGTaGTCATCCCCACAGGGGATATTCGCACCAGCCACG +
Preference number: 6 (lower is better)
Translates to: GMSPSVLKLAFL*SSPQGIFAPAT
Trigger: CGTGGCTGGTGCGAATATCCCCTGTGGGGATGACAACAAGAAGGCCAACTTCAGGACTGAAGGAGACATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS CAA 72 bp CCTGCATCCAGTCTGAGCAACGCCTGGCTGGCCCATTaGTTGAAGGTGTCATGTATCACAGGAGAAACCAGC +
Preference number: 6 (lower is better)
Translates to: PASSLSNAWLAH*LKVSCITGETS
Trigger: GCTGGTTTCTCCTGTGATACATGACACCTTCAACAAATGGGCCAGCCAGGCGTTGCTCAGACTGGATGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504704.6
CDS GCA 72 bp ATGAGTGAAAGGCCAAGAAGAACATCATGTGAGGCCTaGATCCAGTCTGAGCAACGCCTGGCTGGCCCATTT +
Preference number: 6 (lower is better)
Translates to: MSERPRRTSCEA*IQSEQRLAGPF
Trigger: AAATGGGCCAGCCAGGCGTTGCTCAGACTGGATGCAGGCCTCACATGATGTTCTTCTTGGCCTTTCACTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504704.6
CDS CCA 72 bp CATCATGTGAGGCCTGCATCCAGTCTGAGCAACGCCTaGCTGGCCCATTTGTTGAAGGTGTCATGTATCACA +
Preference number: 6 (lower is better)
Translates to: HHVRPASSLSNA*LAHLLKVSCIT
Trigger: TGTGATACATGACACCTTCAACAAATGGGCCAGCCAGGCGTTGCTCAGACTGGATGCAGGCCTCACATGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504704.6
CDS TCA 72 bp TGCAAAACCCTTGTCAGACTCGCCTTCATCCCCCTCTaGAAGCCGATTCTGAGGACAGCAAACATTCTCCTG +
Preference number: 6 (lower is better)
Translates to: CKTLVRLAFIPL*KPILRTANILL
Trigger: CAGGAGAATGTTTGCTGTCCTCAGAATCGGCTTTCAGAGGGGGATGAAGGCGAGTCTGACAAGGGTTTTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS TCA 72 bp CAAGAGCAGAGTTGCACAGAGTGGGTTAAAAGGCTCTaGGGCTACACAGGAGCACAAGGACCTTGGAGTAGT +
Preference number: 6 (lower is better)
Translates to: QEQSCTEWVKRL*GYTGAQGPWSS
Trigger: ACTACTCCAAGGTCCTTGTGCTCCTGTGTAGCCTCAGAGCCTTTTAACCCACTCTGTGCAACTCTGCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504704.6
CDS CCA 72 bp CTGCTGCTGCTACTGCTGCTGACACTGCTGCTTCCCTaGCAGCACTTGGCTGATATTTTAATAGGAACATCC +
Preference number: 6 (lower is better)
Translates to: LLLLLLLTLLLP*QHLADILIGTS
Trigger: GGATGTTCCTATTAAAATATCAGCCAAGTGCTGCCAGGGAAGCAGCAGTGTCAGCAGCAGTAGCAGCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264433.11
ENST00000504704.6
ENST00000512986.5
CDS GCA 72 bp GTAGGCATCTCCACTTTCAACAGCTCACAGACAGCTTaGTGGTCCATCTTCATTCCTGCCCCCAAAACTTCA +
Preference number: 6 (lower is better)
Translates to: VGISTFNSSQTA*WSIFIPAPKTS
Trigger: TGAAGTTTTGGGGGCAGGAATGAAGATGGACCAGCAAGCTGTCTGTGAGCTGTTGAAAGTGGAGATGCCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS CCA 72 bp CCTGTCTTCATTCTGTCCTCTGCTTGGCATATCAACTaGTGTGCTGTGTGCTGCAAAGAAAGAAGCACTCCG +
Preference number: 6 (lower is better)
Translates to: PVFILSSAWHIN*CAVCCKERSTP
Trigger: CGGAGTGCTTCTTTCTTTGCAGCACACAGCACACCAGTTGATATGCCAAGCAGAGGACAGAATGAAGACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504715.1
CDS TCA 72 bp GTACTGGTACTTTGGAAGCTGTTCCTTAGCATGATGTaGAGATCCCCCAGAAGAACTGTGGGAAGAGATGCT +
Preference number: 6 (lower is better)
Translates to: VLVLWKLFLSMM*RSPRRTVGRDA
Trigger: AGCATCTCTTCCCACAGTTCTTCTGGGGGATCTTCACATCATGCTAAGGAACAGCTTCCAAAGTACCAGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264433.11
ENST00000504704.6
ENST00000512986.5
CDS TCA 72 bp ATCTTGCTCCCATTTAAAACTTGGTCACCTTCACCATaGTTGCCACTCCAGGTCAGCTGGTTCTCTTGTAGC +
Preference number: 6 (lower is better)
Translates to: ILLPFKTWSPSP*LPLQVSWFSCS
Trigger: GCTACAAGAGAACCAGCTGACCTGGAGTGGCAATCATGGTGAAGGTGACCAAGTTTTAAATGGGAGCAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264433.11
ENST00000512986.5
CDS CCA 72 bp GATTCAATCCCCAGTACGACACCTAATTCTTTCACATaGACTCGTGTGTGTCCCCGGAGATATTCAGATAGC +
Preference number: 6 (lower is better)
Translates to: DSIPSTTPNSFT*TRVCPRRYSDS
Trigger: GCTATCTGAATATCTCCGGGGACACACACGAGTCCATGTGAAAGAATTAGGTGTCGTACTGGGGATTGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264433.11
CDS CAA 72 bp TTCATCAAGCAGAGCACCACACACCACCTCCAGTCCTaGAATTTCAGTTCACTCATTCACCACCCTTCTCTT +
Preference number: 6 (lower is better)
Translates to: FIKQSTTHHLQS*NFSSLIHHPSL
Trigger: AAGAGAAGGGTGGTGAATGAGTGAACTGAAATTCAAGGACTGGAGGTGGTGTGTGGTGCTCTGCTTGATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504704.6
CDS CAA 72 bp GGCAGAATTTTCGAAACACCATGGATTTGGCCGCATTaGAAACCAATATCTGTGATCACAAGAGCCCCTTGG +
Preference number: 6 (lower is better)
Translates to: GRIFETPWIWPH*KPISVITRAPW
Trigger: CCAAGGGGCTCTTGTGATCACAGATATTGGTTTCAAATGCGGCCAAATCCATGGTGTTTCGAAAATTCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504704.6
CDS CAA 90 bp AATAGGAACATCCTCTGTTTTCTGAGCTGTCACCTCCTCAATCTTTaGAACAGCTTTAGAGTCAAACAAGACTTGTCTGCCTCTCCTGTC +
Preference number: 6 (lower is better)
Translates to: NRNILCFLSCHLLNL*NSFRVKQDLSASPV
Trigger: GACAGGAGAGGCAGACAAGTCTTGTTTGACTCTAAAGCTGTTCAAAAGATTGAGGAGGTGACAGCTCAGAAAACAGAGGATGTTCCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264433.11
ENST00000504704.6
ENST00000505445.1
ENST00000512986.5
CDS TCA 72 bp CATCAAACGGCTGACATAAAACTGGACTCGGAGACTTaGTTCTGCTATTTTCCTACAGGAGATCATAGCCTT +
Preference number: 6 (lower is better)
Translates to: HQTADIKLDSET*FCYFPTGDHSL
Trigger: AAGGCTATGATCTCCTGTAGGAAAATAGCAGAATCAAGTCTCCGAGTCCAGTTTTATGTCAGCCGTTTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264433.11
ENST00000504715.1
ENST00000512986.5
CDS TCA 72 bp TCTCCAAAACGGACAACTAAAGATACAAGGCTTCAGTaGCTTCTCTTTACAAGCTCCTCCAAGGTCTTGTTC +
Preference number: 6 (lower is better)
Translates to: SPKRTTKDTRLQ*LLFTSSSKVLF
Trigger: GAACAAGACCTTGGAGGAGCTTGTAAAGAGAAGTCACTGAAGCCTTGTATCTTTAGTTGTCCGTTTTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505130.1
CDS CAA 72 bp ATCCTCTGTTTTCTGAGCTGTCACCTCCTCAATCTTTaGAACAGCTTTAGAGTCAAACAAGACTTGTCTGCC +
Preference number: 6 (lower is better)
Translates to: ILCFLSCHLLNL*NSFRVKQDLSA
Trigger: GGCAGACAAGTCTTGTTTGACTCTAAAGCTGTTCAAAAGATTGAGGAGGTGACAGCTCAGAAAACAGAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264433.11
ENST00000504704.6
ENST00000505445.1
ENST00000512986.5
CDS CAA 90 bp AGGTTCATTGGCAGAATTTTCGAAACACCATGGATTTGGCCGCATTaGAAACCAATATCTGTGATCACAAGAGCCCCTTGGATTTCTAGA +
Preference number: 6 (lower is better)
Translates to: RFIGRIFETPWIWPH*KPISVITRAPWISR
Trigger: TCTAGAAATCCAAGGGGCTCTTGTGATCACAGATATTGGTTTCAAATGCGGCCAAATCCATGGTGTTTCGAAAATTCTGCCAATGAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504704.6
CDS CAA 90 bp TTTACAAGAGAGGTTCATTGGCAGAATTTTCGAAACACCATGGATTaGGCCGCATTTGAAACCAATATCTGTGATCACAAGAGCCCCTTG +
Preference number: 6 (lower is better)
Translates to: FTREVHWQNFRNTMD*AAFETNICDHKSPL
Trigger: CAAGGGGCTCTTGTGATCACAGATATTGGTTTCAAATGCGGCCAAATCCATGGTGTTTCGAAAATTCTGCCAATGAACCTCTCTTGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504704.6
CDS CAA 90 bp CCATATGTATTCATCAAGCAGAGCACCACACACCACCTCCAGTCCTaGAATTTCAGTTCACTCATTCACCACCCTTCTCTTATAATACAA +
Preference number: 6 (lower is better)
Translates to: PYVFIKQSTTHHLQS*NFSSLIHHPSLIIQ
Trigger: TTGTATTATAAGAGAAGGGTGGTGAATGAGTGAACTGAAATTCAAGGACTGGAGGTGGTGTGTGGTGCTCTGCTTGATGAATACATATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504704.6
CDS TCA 72 bp AGAGAGAGAGAGAAGTCTTCCATGCTCTTATTAGAGTaGCTTTTAATGAAACTCCGTGCAGGTAAGGATGCA +
Preference number: 6 (lower is better)
Translates to: REREKSSMLLLE*LLMKLRAGKDA
Trigger: TGCATCCTTACCTGCACGGAGTTTCATTAAAAGTCACTCTAATAAGAGCATGGAAGACTTCTCTCTCTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504704.6
CDS TCA 72 bp AGGACAGATTTACTTCCACAAACCCTTCTCTTCCTCTaGGTCTATACTCAACAGTCAAGCAAGCACATTACT +
Preference number: 6 (lower is better)
Translates to: RTDLLPQTLLFL*VYTQQSSKHIT
Trigger: AGTAATGTGCTTGCTTGACTGTTGAGTATAGACTCAGAGGAAGAGAAGGGTTTGTGGAAGTAAATCTGTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504704.6
CDS CCA 72 bp CAAGAGAGGTTCATTGGCAGAATTTTCGAAACACCATaGATTTGGCCGCATTTGAAACCAATATCTGTGATC +
Preference number: 6 (lower is better)
Translates to: QERFIGRIFETP*IWPHLKPISVI
Trigger: GATCACAGATATTGGTTTCAAATGCGGCCAAATCCATGGTGTTTCGAAAATTCTGCCAATGAACCTCTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504704.6
CDS CCA 72 bp AGAGTATTAGCGAAGACATTTACAAGAGAGGTTCATTaGCAGAATTTTCGAAACACCATGGATTTGGCCGCA +
Preference number: 6 (lower is better)
Translates to: RVLAKTFTREVH*QNFRNTMDLAA
Trigger: TGCGGCCAAATCCATGGTGTTTCGAAAATTCTGCCAATGAACCTCTCTTGTAAATGTCTTCGCTAATACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504704.6
CDS CAA 72 bp GAGGTTCATTGGCAGAATTTTCGAAACACCATGGATTaGGCCGCATTTGAAACCAATATCTGTGATCACAAG +
Preference number: 6 (lower is better)
Translates to: EVHWQNFRNTMD*AAFETNICDHK
Trigger: CTTGTGATCACAGATATTGGTTTCAAATGCGGCCAAATCCATGGTGTTTCGAAAATTCTGCCAATGAACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504704.6
CDS CCA 72 bp AGGTTCATTGGCAGAATTTTCGAAACACCATGGATTTaGCCGCATTTGAAACCAATATCTGTGATCACAAGA +
Preference number: 6 (lower is better)
Translates to: RFIGRIFETPWI*PHLKPISVITR
Trigger: TCTTGTGATCACAGATATTGGTTTCAAATGCGGCCAAATCCATGGTGTTTCGAAAATTCTGCCAATGAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504704.6
CDS CAA 90 bp ATCCTGACCATAAACATGGACTTGGAGACAAATCCTGAAGTTCCTTaGTTATGTGAGGAACATTCTGTAATGACCAGCAGTTCTAAACAA +
Preference number: 6 (lower is better)
Translates to: ILTINMDLETNPEVP*LCEEHSVMTSSSKQ
Trigger: TTGTTTAGAACTGCTGGTCATTACAGAATGTTCCTCACATAACAAAGGAACTTCAGGATTTGTCTCCAAGTCCATGTTTATGGTCAGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512986.5
CDS TCA 72 bp ATTGTAGAGTTACTTAGAAAAACTCATGTTCTGGCATaGACTGTGGAAAACACTCTGAAGTATTACAGACTT +
Preference number: 6 (lower is better)
Translates to: IVELLRKTHVLA*TVENTLKYYRL
Trigger: AAGTCTGTAATACTTCAGAGTGTTTTCCACAGTTCATGCCAGAACATGAGTTTTTCTAAGTAACTCTACAAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504704.6