RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FNIP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000217128

Ensembl transcript IDs: ENST00000307954.12, ENST00000307968.11, ENST00000510461.6, ENST00000511848.1, ENST00000615660.4, ENST00000623690.1

Found 354 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAGCTCCTATGGGTTCATaGGGGTTGATACCAAAAGCA +
Preference number: 2 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQAPMGS*GLIPKA
Trigger: TGCTTTTGGTATCAACCCTCATGAACCCATAGGAGC...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
3UTR-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAGCTATTTATGAGCTGTaGCAACACTGCAGTGATCAC +
Preference number: 2 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQAIYEL*QHCSDH
Trigger: GTGATCACTGCAGTGTTGTCACAGCTCATAAATAGC...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
3UTR-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAGTGACAACACTGCAGTaGTCACATGAAACTCTTGAT +
Preference number: 2 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQVTTLQ*SHETLD
Trigger: ATCAAGAGTTTCATGTGATCACTGCAGTGTTGTCAC...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
3UTR-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAAGGGCCTTGGCTACCTaGGCACTTTTAAAGAATATA +
Preference number: 2 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQRALAT*ALLKNI
Trigger: TATATTCTTTAAAAGTGCTCAGGTAGCCAAGGCCCT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
3UTR-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTGCTCCTATGGGTTCATaGGGGTTGATACCAAAAGCA +
Preference number: 2 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSAPMGS*GLIPKA
Trigger: TGCTTTTGGTATCAACCCTCATGAACCCATAGGAGC...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
3UTR-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAACAGCAAGGCAAAATGTaGCCCAATGCTGTAAATTCA +
Preference number: 2 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQQQGKM*PNAVNS
Trigger: TGAATTTACAGCATTGGGTCACATTTTGCCTTGCTG...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
3UTR-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTGCTATTTATGAGCTGTaGCAACACTGCAGTGATCAC +
Preference number: 2 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSAIYEL*QHCSDH
Trigger: GTGATCACTGCAGTGTTGTCACAGCTCATAAATAGC...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
3UTR-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCACTGTTGCTATTTATaGGCTGTGACAACACTGCAG +
Preference number: 2 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSHCCYL*AVTTLQ
Trigger: CTGCAGTGTTGTCACAGCTCATAAATAGCAACAGTG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
3UTR-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTGTGACAACACTGCAGTaGTCACATGAAACTCTTGAT +
Preference number: 2 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSVTTLQ*SHETLD
Trigger: ATCAAGAGTTTCATGTGATCACTGCAGTGTTGTCAC...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
3UTR-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTAGGGCCTTGGCTACCTaGGCACTTTTAAAGAATATA +
Preference number: 2 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSRALAT*ALLKNI
Trigger: TATATTCTTTAAAAGTGCTCAGGTAGCCAAGGCCCT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
3UTR-3UTR GCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAACACAGAATATACAATaGTATGCAGAATACCCTGGT +
Preference number: 2 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQTQNIQ*YAEYPG
Trigger: ACCAGGGTATTCTGCATAGCATTGTATATTCTGTGT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
3UTR-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATTCTACCGTACACTTTaGCTTTTTCAAATGCTTCAA +
Preference number: 2 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQFYRTL*LFQMLQ
Trigger: TTGAAGCATTTGAAAAAGCCAAAGTGTACGGTAGAA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
3UTR-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAGTACATATGTACACTTaGGTGGATAACATAACACAT +
Preference number: 2 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQVHMYT*VDNITH
Trigger: ATGTGTTATGTTATCCACCCAAGTGTACATATGTAC...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
3UTR-3UTR GCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTAAGAATCTCCATAAATaGATGTTGTGTCTGCTTCCT +
Preference number: 2 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSKNLHK*MLCLLP
Trigger: AGGAAGCAGACACAACATGCATTTATGGAGATTCTT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
3UTR-3UTR GCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTACACAGAATATACAATaGTATGCAGAATACCCTGGT +
Preference number: 2 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSTQNIQ*YAEYPG
Trigger: ACCAGGGTATTCTGCATAGCATTGTATATTCTGTGT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
3UTR-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTTTCTACCGTACACTTTaGCTTTTTCAAATGCTTCAA +
Preference number: 2 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSFYRTL*LFQMLQ
Trigger: TTGAAGCATTTGAAAAAGCCAAAGTGTACGGTAGAA...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
3UTR-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTGTACATATGTACACTTaGGTGGATAACATAACACAT +
Preference number: 2 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSVHMYT*VDNITH
Trigger: ATGTGTTATGTTATCCACCCAAGTGTACATATGTAC...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
3UTR TCA 72 bp GAAACAAATATTCAGCTCCTATGGGTTCATGAGGGTTaGTACCAAAAGCAAGGGCCTTGGCTACCTGAGCAC +
Preference number: 3 (lower is better)
Translates to: ETNIQLLWVHEG*YQKQGPWLPEH
Trigger: GTGCTCAGGTAGCCAAGGCCCTTGCTTTTGGTATCAACCCTCATGAACCCATAGGAGCTGAATATTTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
3UTR-3UTR CAA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAAATCATGAGACACTGTaGCTATTTATGAGCTGTGAC +
Preference number: 3 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQNHETL*LFMSCD
Trigger: GTCACAGCTCATAAATAGCAACAGTGTCTCATGATT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
3UTR-3UTR CAA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATTTCTACCGTACACTTaGGCTTTTTCAAATGCTTCA +
Preference number: 3 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQFLPYT*AFSNAS
Trigger: TGAAGCATTTGAAAAAGCCAAAGTGTACGGTAGAAA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
3UTR-3UTR CAA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAGTTTTTGCCGATGCTTaGGTGCAATTTTTAATCCTA +
Preference number: 3 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQVFADA*VQFLIL
Trigger: TAGGATTAAAAATTGCACCAAAGCATCGGCAAAAAC...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
3UTR-3UTR CAA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTAATCATGAGACACTGTaGCTATTTATGAGCTGTGAC +
Preference number: 3 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSNHETL*LFMSCD
Trigger: GTCACAGCTCATAAATAGCAACAGTGTCTCATGATT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
3UTR-3UTR CAA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTTTTCTACCGTACACTTaGGCTTTTTCAAATGCTTCA +
Preference number: 3 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSFLPYT*AFSNAS
Trigger: TGAAGCATTTGAAAAAGCCAAAGTGTACGGTAGAAA...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAACAGGGGTCGCTCCGCTaGGCGCTTGCTAGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQQGSLR*ALARPL
Trigger: CAGGGGCCTAGCAAGCGCCCAGCGGAGCGACCCCTG...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAACTGAACCCGCAATCTaGGTCCCGGGCGTCGCGGCC +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQTEPAI*VPGVAA
Trigger: GGCCGCGACGCCCGGGACCCAGATTGCGGGTTCAGT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAAGGCGGAGCGGACCCTaGTCAGAGAATGCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQRRSGP*SENARL
Trigger: CAGGCGGGCATTCTCTGAGCAGGGTCCGCTCCGCCT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307954.12
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCGCTTGCTAGGCCCCTaGTCCTACAGCCGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSRLLGP*SYSRPA
Trigger: GGCGGGGCGGCTGTAGGAGCAGGGGCCTAGCAAGCG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCAGGGGTCGCTCCGCTaGGCGCTTGCTAGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSQGSLR*ALARPL
Trigger: CAGGGGCCTAGCAAGCGCCCAGCGGAGCGACCCCTG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAGCCCCGCCACCCCCATaGGCGCCTCAGTCATATGAC +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQAPPPP*APQSYD
Trigger: GTCATATGACTGAGGCGCCCATGGGGGTGGCGGGGC...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAAGAAAGAGGCGCTCCTaGTCAGGCGGAGCGGACCCT +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQRKRRS*SGGADP
Trigger: AGGGTCCGCTCCGCCTGATCAGGAGCGCCTCTTTCT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307954.12
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTACTGAACCCGCAATCTaGGTCCCGGGCGTCGCGGCC +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSTEPAI*VPGVAA
Trigger: GGCCGCGACGCCCGGGACCCAGATTGCGGGTTCAGT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAGCCCGGTCCTCTTGCTaGAGAGCTTCTGGAACAGCG +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQARSSC*RASGTA
Trigger: CGCTGTTCCAGAAGCTCTTCAGCAAGAGGACCGGGC...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAACCCAGCTCCTTGACATaGACACGCATCTGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQPSSLT*TRICPL
Trigger: GAGGGGGCAGATGCGTGTTCATGTCAAGGAGCTGGG...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAACCCTGCTCAGAGAATaGCCGCCTGGGGCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQTLLRE*PPGAAE
Trigger: TTCTGCAGCCCCAGGCGGGCATTCTCTGAGCAGGGT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307954.12
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTAGGCGGAGCGGACCCTaGTCAGAGAATGCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSRRSGP*SENARL
Trigger: CAGGCGGGCATTCTCTGAGCAGGGTCCGCTCCGCCT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307954.12
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAACCACTCCCAGCTCCTTaGCATGAACACGCATCTGCC +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQPLPAP*HEHASA
Trigger: GGCAGATGCGTGTTCATGTCAAGGAGCTGGGAGTGG...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTAGAAAGAGGCGCTCCTaGTCAGGCGGAGCGGACCCT +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSRKRRS*SGGADP
Trigger: AGGGTCCGCTCCGCCTGATCAGGAGCGCCTCTTTCT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307954.12
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTGCCCGGTCCTCTTGCTaGAGAGCTTCTGGAACAGCG +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSARSSC*RASGTA
Trigger: CGCTGTTCCAGAAGCTCTTCAGCAAGAGGACCGGGC...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCCCAGCTCCTTGACATaGACACGCATCTGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSPSSLT*TRICPL
Trigger: GAGGGGGCAGATGCGTGTTCATGTCAAGGAGCTGGG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAATGCCCGCCTGGGGCTaGAGAACTGTGAAAGACCTA +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQMPAWG*RTVKDL
Trigger: TAGGTCTTTCACAGTTCTGCAGCCCCAGGCGGGCAT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307954.12
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTACCCTGCTCAGAGAATaGCCGCCTGGGGCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSTLLRE*PPGAAE
Trigger: TTCTGCAGCCCCAGGCGGGCATTCTCTGAGCAGGGT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307954.12
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAGTCAGGCACATAAGATaGGCAGTAGCCACCCAGCAA +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQVRHIR*AVATQQ
Trigger: TTGCTGGGTGGCTACTGCTCATCTTATGTGCCTGAC...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCCACTCCCAGCTCCTTaGCATGAACACGCATCTGCC +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSPLPAP*HEHASA
Trigger: GGCAGATGCGTGTTCATGTCAAGGAGCTGGGAGTGG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAGCAACATATGGAGAGTaGGTGCTTGCTACAGCAGCC +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQATYGE*VLATAA
Trigger: GGCTGCTGTAGCAAGCACTCACTCTCCATATGTTGC...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAGGCAGGTGGATCACTTaGGTTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQGRWIT*VQEFKT
Trigger: GGTCTTGAACTCCTGAACTCAAGTGATCCACCTGCC...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAGAGAGATGCAGACCGTaGTATGCCACTGTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQERCRP*YATVSV
Trigger: GACAGAGACAGTGGCATAGCACGGTCTGCATCTCTC...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAACAAGCTGCTGAGAGATaGAGACCGTGCTATGCCACT +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQQAAER*RPCYAT
Trigger: AGTGGCATAGCACGGTCTGCATCTCTCAGCAGCTTG...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAAACTTGTTGTTTGGCTaGGTCGCCAACGTCGCTGGT +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQNLLFG*VANVAG
Trigger: ACCAGCGACGTTGGCGACGCAGCCAAACAACAAGTT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATGGAGAGTGAGTGCTTaGTACAGCAGCCAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQWRVSA*YSSQKW
Trigger: CCACTTCTGGCTGCTGTAGCAAGCACTCACTCTCCA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAGCTGAGCATGAGCTGTaGAGGGGAACGAATCTGATG +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQAEHEL*RGTNLM
Trigger: CATCAGATTCGTTCCCCTCCACAGCTCATGCTCAGC...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATCCAAACTTGTTGTTTaGCTGCGTCGCCAACGTCGC +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQSKLVV*LRRQRR
Trigger: GCGACGTTGGCGACGCAGCCAAACAACAAGTTTGGA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAACCAAACTTCTCTGACTaGCATCAGCTGATCTCCGGC +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQPNFSD*HQLISG
Trigger: GCCGGAGATCAGCTGATGCCAGTCAGAGAAGTTTGG...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAAGGACCTCCCGAAGTTaGCAATGTTGGGCTGAACAG +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQRTSRS*QCWAEQ
Trigger: CTGTTCAGCCCAACATTGCCAACTTCGGGAGGTCCT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATGTCTCTGTCCTCATTaGGCTCTCTTCCAGGCATGT +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQCLCPH*ALFQAC
Trigger: ACATGCCTGGAAGAGAGCTCAATGAGGACAGAGACA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAACTGACTGGCATCAGCTaGTCTCCGGCTCATTTTCAT +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQLTGIS*SPAHFH
Trigger: ATGAAAATGAGCCGGAGATCAGCTGATGCCAGTCAG...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAGGAACCCAGGCAAGATaGTTGGTCAGAACTGCAGTA +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQGTQAR*LVRTAV
Trigger: TACTGCAGTTCTGACCAATCATCTTGCCTGGGTTCC...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAGTTGTCCATTTGGCATaGCTGTTGGAACCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQVVHLA*LLEPRQ
Trigger: TTGCCTGGGTTCCAACAGTCATGCCAAATGGACAAC...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAGCCTGTGTGACTGTCTaGATCCAGCAACTTCTCACT +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQACVTV*IQQLLT
Trigger: AGTGAGAAGTTGCTGGATTCAGACAGTCACACAGGC...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATCTGACATCAGACACTaGCGGAACCTCTCATCACTC +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQSDIRH*RNLSSL
Trigger: GAGTGATGAGAGGTTCCGTCAGTGTCTGATGTCAGA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATCCATTGGGTTGCTGTaGACTGCAAAGAAAGAGGCG +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQSIGLL*TAKKEA
Trigger: CGCCTCTTTCTTTGCAGTTCACAGCAACCCAATGGA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307954.12
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAATGCAGACCGTGCTATaGCACTGTCTCTGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQMQTVL*HCLCPH
Trigger: ATGAGGACAGAGACAGTGGCATAGCACGGTCTGCAT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTATGCCCGCCTGGGGCTaGAGAACTGTGAAAGACCTA +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSMPAWG*RTVKDL
Trigger: TAGGTCTTTCACAGTTCTGCAGCCCCAGGCGGGCAT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307954.12
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATGGGTTGCTGTGAACTaGAAAGAAAGAGGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQWVAVN*KERGAP
Trigger: AGGAGCGCCTCTTTCTTTGCAGTTCACAGCAACCCA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307954.12
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAGAGCACCGAGAACCCTaGTACTTAAGACACTGGTCT +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQEHREP*YLRHWS
Trigger: AGACCAGTGTCTTAAGTACCAGGGTTCTCGGTGCTC...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATTTCCGCACAATTCCTaGGTTAGGGCCACAGCTTTC +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQFPHNS*VRATAF
Trigger: GAAAGCTGTGGCCCTAACCCAGGAATTGTGCGGAAA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCAGAGAATGCCCGCCTaGGGCTGCAGAACTGTGAAA +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSQRMPA*GCRTVK
Trigger: TTTCACAGTTCTGCAGCCCCAGGCGGGCATTCTCTG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307954.12
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAGTAGCTCATTGCTACTaGGCCAAACATCATCTCTCC +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQVAHCY*AKHHLS
Trigger: GGAGAGATGATGTTTGGCTCAGTAGCAATGAGCTAC...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATATGCCAAACTTCTCTaGCTGGCATCAGCTGATCTC +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQYAKLL*LASADL
Trigger: GAGATCAGCTGATGCCAGTCAGAGAAGTTTGGCATA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAATTGCTTTGCCTGTGTaGCTGTCTGAATCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQIALPV*LSESSN
Trigger: GTTGCTGGATTCAGACAGTCACACAGGCAAAGCAAT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAACATGCTTTCTGGGTCTaGATGATTCCAACAGGGAAG +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQHAFWV*MIPTGK
Trigger: CTTCCCTGTTGGAATCATTCAGACCCAGAAAGCATG...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATTGGCAATGTTGGGCTaGACAGCACTCACTTCGATT +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQLAMLG*TALTSI
Trigger: AATCGAAGTGAGTGCTGTTCAGCCCAACATTGCCAA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTGTCAGGCACATAAGATaGGCAGTAGCCACCCAGCAA +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSVRHIR*AVATQQ
Trigger: TTGCTGGGTGGCTACTGCTCATCTTATGTGCCTGAC...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATGGCTACTGGCCACTTaGACAGTCCATTTATCCATG +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQWLLAT*TVHLSM
Trigger: CATGGATAAATGGACTGTTCAAGTGGCCAGTAGCCA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTGCAACATATGGAGAGTaGGTGCTTGCTACAGCAGCC +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSATYGE*VLATAA
Trigger: GGCTGCTGTAGCAAGCACTCACTCTCCATATGTTGC...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAAGTTCAAGACCAGCCTaGCCAACACATGGTGAAATC +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQSSRPA*PTHGEI
Trigger: GATTTCACCATGTGTTGGTCAGGCTGGTCTTGAACT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTGGCAGGTGGATCACTTaGGTTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSGRWIT*VQEFKT
Trigger: GGTCTTGAACTCCTGAACTCAAGTGATCCACCTGCC...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAGGGGCTGCAGAACTGTaGAAGACCTATATTTCCAAG +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQGAAEL*KTYISK
Trigger: CTTGGAAATATAGGTCTTTCACAGTTCTGCAGCCCC...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307954.12
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTGAGAGATGCAGACCGTaGTATGCCACTGTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSERCRP*YATVSV
Trigger: GACAGAGACAGTGGCATAGCACGGTCTGCATCTCTC...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCAAGCTGCTGAGAGATaGAGACCGTGCTATGCCACT +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSQAAER*RPCYAT
Trigger: AGTGGCATAGCACGGTCTGCATCTCTCAGCAGCTTG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTAACTTGTTGTTTGGCTaGGTCGCCAACGTCGCTGGT +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSNLLFG*VANVAG
Trigger: ACCAGCGACGTTGGCGACGCAGCCAAACAACAAGTT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAACAAGTCTCCCAGTTGTaGCCAAAGTGGGTTATATGG +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQQVSQL*PKWVIW
Trigger: CCATATAACCCACTTTGGGCACAACTGGGAGACTTG...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAACCATGTCTTGTCGTTTaGCAACTACCACAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQPCLVV*QLPQSL
Trigger: CAAGGACTGTGGTAGTTGGCAAACGACAAGACATGG...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAAATCTGATCCACCACTaGCTGACTTCGAAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQNLIHH*LTSKLS
Trigger: ACTGAGCTTCGAAGTCAGGCAGTGGTGGATCAGATT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTTGGAGAGTGAGTGCTTaGTACAGCAGCCAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSWRVSA*YSSQKW
Trigger: CCACTTCTGGCTGCTGTAGCAAGCACTCACTCTCCA...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATCTCTCCAAGCATATTaGCATCAGAAGAGCACCGAG +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQSLQAY*HQKSTE
Trigger: CTCGGTGCTCTTCTGATGCCAATATGCTTGGAGAGA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTGCTGAGCATGAGCTGTaGAGGGGAACGAATCTGATG +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSAEHEL*RGTNLM
Trigger: CATCAGATTCGTTCCCCTCCACAGCTCATGCTCAGC...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAGTTTGGGGAAGGAAATaGAGTGATCAGCAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQVWGRK*SDQQAA
Trigger: AGCAGCTTGCTGATCACTCCATTTCCTTCCCCAAAC...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTTCCAAACTTGTTGTTTaGCTGCGTCGCCAACGTCGC +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSSKLVV*LRRQRR
Trigger: GCGACGTTGGCGACGCAGCCAAACAACAAGTTTGGA...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCCAAACTTCTCTGACTaGCATCAGCTGATCTCCGGC +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSPNFSD*HQLISG
Trigger: GCCGGAGATCAGCTGATGCCAGTCAGAGAAGTTTGG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAAGGTGGTTGTCCATTTaGCATGACTGTTGGAACCCA +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQRWLSI*HDCWNP
Trigger: TGGGTTCCAACAGTCATGCCAAATGGACAACCACCT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAACCACAACCATTCCTGTaGATCTCATTGCTTTGCCTG +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQPQPFL*ISLLCL
Trigger: CAGGCAAAGCAATGAGATCCACAGGAATGGTTGTGG...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAACGAAGTTGGCAATGTTaGGCTGAACAGCACTCACTT +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQRSWQC*AEQHSL
Trigger: AAGTGAGTGCTGTTCAGCCCAACATTGCCAACTTCG...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTAGGACCTCCCGAAGTTaGCAATGTTGGGCTGAACAG +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSRTSRS*QCWAEQ
Trigger: CTGTTCAGCCCAACATTGCCAACTTCGGGAGGTCCT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTGTAATCCCAGTACTTTaGGAGGTCGAGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSVIPVL*EVEAGG
Trigger: TCCACCTGCCTCGACCTCCCAAAGTACTGGGATTAC...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATACAAAACTCAGGAATaGGAAGCAGTGGGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQYKTQE*EAVGRN
Trigger: GTTCCTCCCCACTGCTTCCCATTCCTGAGTTTTGTA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAACAGCAGCTCATTCCTTaGGCTTTGCGTAAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQQQLIP*ALRKER
Trigger: TCTTTCCTTACGCAAAGCCCAAGGAATGAGCTGCTG...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATCCAGGCATGTCCATTaGGTTGCTGTGAACTGCAAA +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQSRHVH*VAVNCK
Trigger: TTTGCAGTTCACAGCAACCCAATGGACATGCCTGGA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307954.12
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAACCAAAGACTTTAACTTaGGCATCACTGCCGAGTTTC +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQPKTLT*ASLPSF
Trigger: GAAACTCGGCAGTGATGCTCAAGTTAAAGTCTTTGG...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTTGTCTCTGTCCTCATTaGGCTCTCTTCCAGGCATGT +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSCLCPH*ALFQAC
Trigger: ACATGCCTGGAAGAGAGCTCAATGAGGACAGAGACA...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCTGACTGGCATCAGCTaGTCTCCGGCTCATTTTCAT +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSLTGIS*SPAHFH
Trigger: ATGAAAATGAGCCGGAGATCAGCTGATGCCAGTCAG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTGGAACCCAGGCAAGATaGTTGGTCAGAACTGCAGTA +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSGTQAR*LVRTAV
Trigger: TACTGCAGTTCTGACCAATCATCTTGCCTGGGTTCC...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTGTTGTCCATTTGGCATaGCTGTTGGAACCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSVVHLA*LLEPRQ
Trigger: TTGCCTGGGTTCCAACAGTCATGCCAAATGGACAAC...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAAGTGGGTTATATGGATaGGTCTTTGCCAACATGTCC +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQSGLYG*VFANMS
Trigger: GGACATGTTGGCAAAGACTCATCCATATAACCCACT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTGCCTGTGTGACTGTCTaGATCCAGCAACTTCTCACT +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSACVTV*IQQLLT
Trigger: AGTGAGAAGTTGCTGGATTCAGACAGTCACACAGGC...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAACTTTCTGGGTCTGAATaGTTCCAACAGGGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQLSGSE*FQQGSS
Trigger: TGAACTTCCCTGTTGGAATCATTCAGACCCAGAAAG...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATCTCTTTGGTCCTGCTaGGGAAAGCAGGTTTTACAT +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQSLWSC*GKQVLH
Trigger: ATGTAAAACCTGCTTTCCTCAGCAGGACCAAAGAGA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAACCCAAGGGCACTGTCTaGACTTTCATTTCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQPKGTV*TFISWN
Trigger: ATTCCAAGAAATGAAAGTTCAGACAGTGCCCTTGGG...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTTCTGACATCAGACACTaGCGGAACCTCTCATCACTC +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSSDIRH*RNLSSL
Trigger: GAGTGATGAGAGGTTCCGTCAGTGTCTGATGTCAGA...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAGGATGCTGCACAGCATaGGATAAATCTGACATCAGA +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQGCCTA*DKSDIR
Trigger: TCTGATGTCAGATTTATCTCATGCTGTGCAGCATCC...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAACACTGTTGCTATTTATaGGCTGTGACAACACTGCAG +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQHCCYL*AVTTLQ
Trigger: CTGCAGTGTTGTCACAGCTCATAAATAGCAACAGTG...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAGGCGCCTCAGTCATATaGCAGAAATTAGTCACTTCA +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQGASVI*QKLVTS
Trigger: TGAAGTGACTAATTTCTGTCATATGACTGAGGCGCC...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615660.4
CDS-3UTR GCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTATGCAGACCGTGCTATaGCACTGTCTCTGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSMQTVL*HCLCPH
Trigger: ATGAGGACAGAGACAGTGGCATAGCACGGTCTGCAT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAAGCAACTTCTCACTCTaGCATGTTTCCTCTGTTGAC +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQSNFSL*HVSSVD
Trigger: GTCAACAGAGGAAACATGGCAGAGTGAGAAGTTGCT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATTGAAGTATAGCTCCTaGAACCGGTCTTCAAGATGC +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQLKYSS*NRSSRC
Trigger: GCATCTTGAAGACCGGTTGCAGGAGCTATACTTCAA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAATGGGCCAAACAGATTaGAGACACACCAATTTCAGG +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQMGQTD*RHTNFR
Trigger: CCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCCAT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTTGGGTTGCTGTGAACTaGAAAGAAAGAGGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSWVAVN*KERGAP
Trigger: AGGAGCGCCTCTTTCTTTGCAGTTCACAGCAACCCA...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307954.12
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAGCATGTCCATTGGGTTaGTGTGAACTGCAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQACPLG*CELQRK
Trigger: CTTTCTTTGCAGTTCACAGCAACCCAATGGACATGC...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307954.12
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTGAGCACCGAGAACCCTaGTACTTAAGACACTGGTCT +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSEHREP*YLRHWS
Trigger: AGACCAGTGTCTTAAGTACCAGGGTTCTCGGTGCTC...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTTTTCCGCACAATTCCTaGGTTAGGGCCACAGCTTTC +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSFPHNS*VRATAF
Trigger: GAAAGCTGTGGCCCTAACCCAGGAATTGTGCGGAAA...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAAAGGTGGTTCTTTTCTaGAGTCCCCGACATCATTGT +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQKVVLF*SPRHHC
Trigger: ACAATGATGTCGGGGACTCCAGAAAAGAACCACCTT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATGGTTCATCCAAAACTaGATGCTGCACAGCATGAGA +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQWFIQN*MLHSMR
Trigger: TCTCATGCTGTGCAGCATCCAGTTTTGGATGAACCA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCTCGTCTCTGGCTACTaGCCACTTGAACAGTCCATT +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSLVSGY*PLEQSI
Trigger: AATGGACTGTTCAAGTGGCCAGTAGCCAGAGACGAG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAGAAGTGGAAGATCACTaGATTCAATCCCCAGAACCA +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQEVEDH*IQSPEP
Trigger: TGGTTCTGGGGATTGAATCCAGTGATCTTCCACTTC...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAACTAGGTAAAAGGTCATaGGCCAAACAGATTGCAGAC +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQLGKRS*AKQIAD
Trigger: GTCTGCAATCTGTTTGGCCCATGACCTTTTACCTAG...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAGCAGCAAGTCATCCATaGGAGACTCAGGTAATAACT +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQAASHP*ETQVIT
Trigger: AGTTATTACCTGAGTCTCCCATGGATGACTTGCTGC...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAGCCGAGTTTCGATACTaGTATGTCCTCATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQAEFRY*YVLISS
Trigger: AGAAGAAATGAGGACATATCAGTATCGAAACTCGGC...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTGTAGCTCATTGCTACTaGGCCAAACATCATCTCTCC +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSVAHCY*AKHHLS
Trigger: GGAGAGATGATGTTTGGCTCAGTAGCAATGAGCTAC...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATATCTTGTAGCGTATTaGGACTCCCACAAATACTGC +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQYLVAY*DSHKYC
Trigger: GCAGTATTTGTGGGAGTCTCAATACGCTACAAGATA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAGCCACAGCTTTCATCTaGGAGATTAAAGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQATAFI*EIKAFF
Trigger: GAAGAAAGCTTTAATCTCTCAGATGAAAGCTGTGGC...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTTATGCCAAACTTCTCTaGCTGGCATCAGCTGATCTC +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSYAKLL*LASADL
Trigger: GAGATCAGCTGATGCCAGTCAGAGAAGTTTGGCATA...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATGCCCAAGGAGTGGATaGCTGCAATATTTACAGTTA +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQCPRSG*LQYLQL
Trigger: TAACTGTAAATATTGCAGTCATCCACTCCTTGGGCA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTATTGCTTTGCCTGTGTaGCTGTCTGAATCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSIALPV*LSESSN
Trigger: GTTGCTGGATTCAGACAGTCACACAGGCAAAGCAAT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAAGCCTCACAAGAAAATaGAGCAGGCACAATCTTATC +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQSLTRK*SRHNLI
Trigger: GATAAGATTGTGCCTGCTTCATTTTCTTGTGAGGCT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCATGCTTTCTGGGTCTaGATGATTCCAACAGGGAAG +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSHAFWV*MIPTGK
Trigger: CTTCCCTGTTGGAATCATTCAGACCCAGAAAGCATG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTTTGGCAATGTTGGGCTaGACAGCACTCACTTCGATT +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSLAMLG*TALTSI
Trigger: AATCGAAGTGAGTGCTGTTCAGCCCAACATTGCCAA...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTTGGCTACTGGCCACTTaGACAGTCCATTTATCCATG +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSWLLAT*TVHLSM
Trigger: CATGGATAAATGGACTGTTCAAGTGGCCAGTAGCCA...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTAGTTCAAGACCAGCCTaGCCAACACATGGTGAAATC +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSSSRPA*PTHGEI
Trigger: GATTTCACCATGTGTTGGTCAGGCTGGTCTTGAACT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAGAGCCACCCACTTATTaGGGACTAGAATTTCTAAAC +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQEPPTY*GLEFLN
Trigger: GTTTAGAAATTCTAGTCCTCAATAAGTGGGTGGCTC...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTGGAACAACAATAGCATaGGCCACCCACTTATTGAGG +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSGTTIA*ATHLLR
Trigger: CCTCAATAAGTGGGTGGCTCATGCTATTGTTGTTCC...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTGGGGCTGCAGAACTGTaGAAGACCTATATTTCCAAG +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSGAAEL*KTYISK
Trigger: CTTGGAAATATAGGTCTTTCACAGTTCTGCAGCCCC...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307954.12
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAATGATTGGTCAGAACTaGAGTAATGAGAGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQMIGQN*SNESWQ
Trigger: TTGCCAGCTCTCATTACTGCAGTTCTGACCAATCAT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAATATGGATGAGTCTTTaGCAACATGTCCACACTCTG +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQIWMSL*QHVHTL
Trigger: CAGAGTGTGGACATGTTGGCAAAGACTCATCCATAT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCAAGTCTCCCAGTTGTaGCCAAAGTGGGTTATATGG +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSQVSQL*PKWVIW
Trigger: CCATATAACCCACTTTGGGCACAACTGGGAGACTTG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCCATGTCTTGTCGTTTaGCAACTACCACAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSPCLVV*QLPQSL
Trigger: CAAGGACTGTGGTAGTTGGCAAACGACAAGACATGG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTAATCTGATCCACCACTaGCTGACTTCGAAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSNLIHH*LTSKLS
Trigger: ACTGAGCTTCGAAGTCAGGCAGTGGTGGATCAGATT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAACGTCGAATAAGCTCATaGTTTCTGGGTCTGAATGAT +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQRRISS*FLGLND
Trigger: ATCATTCAGACCCAGAAAGCATGAGCTTATTCGACG...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCATATGGAGAGTGAGTaGTTGCTACAGCAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSHMESE*LLQQPE
Trigger: TTCTGGCTGCTGTAGCAAGCACTCACTCTCCATATG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAACAATCAGTCGAATCTaGCTTGGATCAAACTCTGGT +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQTISRI*LGSNSG
Trigger: ACCAGAGTTTGATCCAAGCCAGATTCGACTGATTGT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCCTCCAGGTTTCAGTTaGCAGCATTTCCCAAAGACT +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSPPGFS*QHFPKT
Trigger: AGTCTTTGGGAAATGCTGCCAACTGAAACCTGGAGG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTTCTCTCCAAGCATATTaGCATCAGAAGAGCACCGAG +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSSLQAY*HQKSTE
Trigger: CTCGGTGCTCTTCTGATGCCAATATGCTTGGAGAGA...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTGTTTGGGGAAGGAAATaGAGTGATCAGCAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSVWGRK*SDQQAA
Trigger: AGCAGCTTGCTGATCACTCCATTTCCTTCCCCAAAC...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTAGGTGGTTGTCCATTTaGCATGACTGTTGGAACCCA +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSRWLSI*HDCWNP
Trigger: TGGGTTCCAACAGTCATGCCAAATGGACAACCACCT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAACAGTTGTGCCCAAAGTaGGTTATATGGATGAGTCTT +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQQLCPK*VIWMSL
Trigger: AAGACTCATCCATATAACCCACTTTGGGCACAACTG...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATGCACATTTGTCTACTaGAACAGATCCTGTGCAAAC +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQCTFVY*NRSCAN
Trigger: GTTTGCACAGGATCTGTTCCAGTAGACAAATGTGCA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCCACAACCATTCCTGTaGATCTCATTGCTTTGCCTG +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSPQPFL*ISLLCL
Trigger: CAGGCAAAGCAATGAGATCCACAGGAATGGTTGTGG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCGAAGTTGGCAATGTTaGGCTGAACAGCACTCACTT +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSRSWQC*AEQHSL
Trigger: AAGTGAGTGCTGTTCAGCCCAACATTGCCAACTTCG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAGACAGCTTCTGCTATTaGTTCATCCAAAACTGGATG +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQDSFCY*FIQNWM
Trigger: CATCCAGTTTTGGATGAACCAATAGCAGAAGCTGTC...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTTACAAAACTCAGGAATaGGAAGCAGTGGGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSYKTQE*EAVGRN
Trigger: GTTCCTCCCCACTGCTTCCCATTCCTGAGTTTTGTA...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCAGCAGCTCATTCCTTaGGCTTTGCGTAAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSQQLIP*ALRKER
Trigger: TCTTTCCTTACGCAAAGCCCAAGGAATGAGCTGCTG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTTCCAGGCATGTCCATTaGGTTGCTGTGAACTGCAAA +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSSRHVH*VAVNCK
Trigger: TTTGCAGTTCACAGCAACCCAATGGACATGCCTGGA...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307954.12
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAACGTCTTTCACAGTCTTaGTATACAATCAGTCGAATC +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQRLSQS*YTISRI
Trigger: GATTCGACTGATTGTATATCAAGACTGTGAAAGACG...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCCAAAGACTTTAACTTaGGCATCACTGCCGAGTTTC +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSPKTLT*ASLPSF
Trigger: GAAACTCGGCAGTGATGCTCAAGTTAAAGTCTTTGG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAAGAGCTGGCAAGAATTaGTTTTTGGAAGCATTTTCC +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQRAGKN*FLEAFS
Trigger: GGAAAATGCTTCCAAAAATCAATTCTTGCCAGCTCT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTAGTGGGTTATATGGATaGGTCTTTGCCAACATGTCC +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSSGLYG*VFANMS
Trigger: GGACATGTTGGCAAAGACTCATCCATATAACCCACT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCTTTCTGGGTCTGAATaGTTCCAACAGGGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSLSGSE*FQQGSS
Trigger: TGAACTTCCCTGTTGGAATCATTCAGACCCAGAAAG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAAAAGCAGGTTTTACATaGATCTTGGGGAACTGTTTC +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQKAGFT*ILGNCF
Trigger: GAAACAGTTCCCCAAGATTCATGTAAAACCTGCTTT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTTCTCTTTGGTCCTGCTaGGGAAAGCAGGTTTTACAT +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSSLWSC*GKQVLH
Trigger: ATGTAAAACCTGCTTTCCTCAGCAGGACCAAAGAGA...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCCCAAGGGCACTGTCTaGACTTTCATTTCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSPKGTV*TFISWN
Trigger: ATTCCAAGAAATGAAAGTTCAGACAGTGCCCTTGGG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCCGAGAACCCGATACTaGTATGTCCTCATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSPRTRY*YVLISS
Trigger: AGAAGAAATGAGGACATATCAGTATCGGGTTCTCGG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307954.12
CDS-3UTR GCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTAGCAACTTCTCACTCTaGCATGTTTCCTCTGTTGAC +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSSNFSL*HVSSVD
Trigger: GTCAACAGAGGAAACATGGCAGAGTGAGAAGTTGCT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTTTGAAGTATAGCTCCTaGAACCGGTCTTCAAGATGC +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSLKYSS*NRSSRC
Trigger: GCATCTTGAAGACCGGTTGCAGGAGCTATACTTCAA...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTATGGGCCAAACAGATTaGAGACACACCAATTTCAGG +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSMGQTD*RHTNFR
Trigger: CCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCCAT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTGCATGTCCATTGGGTTaGTGTGAACTGCAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSACPLG*CELQRK
Trigger: CTTTCTTTGCAGTTCACAGCAACCCAATGGACATGC...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307954.12
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAAGGTTCTCCAATTCGTaGCATCGTGTAAAGATTACA +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQRFSNS*HRVKIT
Trigger: TGTAATCTTTACACGATGCCACGAATTGGAGAACCT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTAAGGTGGTTCTTTTCTaGAGTCCCCGACATCATTGT +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSKVVLF*SPRHHC
Trigger: ACAATGATGTCGGGGACTCCAGAAAAGAACCACCTT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAGAAGGAGAAATCATCTaGCACTCATCTGAAATTCCT +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQEGEII*HSSEIP
Trigger: AGGAATTTCAGATGAGTGCCAGATGATTTCTCCTTC...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAACAACTGTCTCTAACTTaGCGTCAAAGCAAGTTCTTA +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQQLSLT*RQSKFL
Trigger: TAAGAACTTGCTTTGACGCCAAGTTAGAGACAGTTG...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATCAGACTCTCCAGATTaGTCCTTGGTTGTTTGTTTA +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQSDSPD*SLVVCL
Trigger: TAAACAAACAACCAAGGACCAATCTGGAGAGTCTGA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCATGGGGGACAAGAATaGAGAGTGTATCTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSHGGQE*RVYLFG
Trigger: ACCAAAGAGATACACTCTCCATTCTTGTCCCCCATG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTTGGTTCATCCAAAACTaGATGCTGCACAGCATGAGA +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSWFIQN*MLHSMR
Trigger: TCTCATGCTGTGCAGCATCCAGTTTTGGATGAACCA...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTGAAGTGGAAGATCACTaGATTCAATCCCCAGAACCA +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSEVEDH*IQSPEP
Trigger: TGGTTCTGGGGATTGAATCCAGTGATCTTCCACTTC...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATATTTGTGCAACATATaGAGAGTGAGTGCTTGCTAC +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQYLCNI*RVSACY
Trigger: GTAGCAAGCACTCACTCTCCATATGTTGCACAAATA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCTAGGTAAAAGGTCATaGGCCAAACAGATTGCAGAC +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSLGKRS*AKQIAD
Trigger: GTCTGCAATCTGTTTGGCCCATGACCTTTTACCTAG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTGCAGCAAGTCATCCATaGGAGACTCAGGTAATAACT +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSAASHP*ETQVIT
Trigger: AGTTATTACCTGAGTCTCCCATGGATGACTTGCTGC...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTTATCTTGTAGCGTATTaGGACTCCCACAAATACTGC +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSYLVAY*DSHKYC
Trigger: GCAGTATTTGTGGGAGTCTCAATACGCTACAAGATA...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTTCCATTGGGTTGCTGTaGACTATATTTCCAAGCAGT +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSSIGLL*TIFPSS
Trigger: ACTGCTTGGAAATATAGTTCACAGCAACCCAATGGA...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307968.11
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTGCCACAGCTTTCATCTaGGAGATTAAAGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSATAFI*EIKAFF
Trigger: GAAGAAAGCTTTAATCTCTCAGATGAAAGCTGTGGC...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATTCATCTTTGGACAATaGAAAGATTACCCCAATTGC +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQFIFGQ*KDYPNC
Trigger: GCAATTGGGGTAATCTTTTCATTGTCCAAAGATGAA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAGACAAGGACATACTCTaGTTCTTCTATTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQDKDIL*FFYFTF
Trigger: AAAGGTGAAATAGAAGAATCAGAGTATGTCCTTGTC...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATGTTTCTATGCATTGTaGCAAGGACATACTCTGATT +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQCFYAL*QGHTLI
Trigger: AATCAGAGTATGTCCTTGTCACAATGCATAGAAACA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTTGCCCAAGGAGTGGATaGCTGCAATATTTACAGTTA +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSCPRSG*LQYLQL
Trigger: TAACTGTAAATATTGCAGTCATCCACTCCTTGGGCA...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTAGCCTCACAAGAAAATaGAGCAGGCACAATCTTATC +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSSLTRK*SRHNLI
Trigger: GATAAGATTGTGCCTGCTTCATTTTCTTGTGAGGCT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATGTCTAGTCATATCATaGCCTGTATCTTCACTTTCA +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQCLVIS*PVSSLS
Trigger: TGAAAGTGAAGATACAGGTCATGATATGACTAGACA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCAGCAAGGCAAAATGTaGCCCAATGCTGTAAATTCA +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSQQGKM*PNAVNS
Trigger: TGAATTTACAGCATTGGGTCACATTTTGCCTTGCTG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTGAGCCACCCACTTATTaGGGACTAGAATTTCTAAAC +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSEPPTY*GLEFLN
Trigger: GTTTAGAAATTCTAGTCCTCAATAAGTGGGTGGCTC...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAAAAGATTACCCCAATTaGAATCTTCTTTTTCCGCAC +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQKDYPN*NLLFPH
Trigger: GTGCGGAAAAAGAAGATTGCAATTGGGGTAATCTTT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTATATGGATGAGTCTTTaGCAACATGTCCACACTCTG +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSIWMSL*QHVHTL
Trigger: CAGAGTGTGGACATGTTGGCAAAGACTCATCCATAT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAACTGCTTTTGTTTCTATaGATTGTGACAAGGACATAC +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQLLLFL*IVTRTY
Trigger: GTATGTCCTTGTCACAATGCATAGAAACAAAAGCAG...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
CDS-3UTR GCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCGTCGAATAAGCTCATaGTTTCTGGGTCTGAATGAT +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSRRISS*FLGLND
Trigger: ATCATTCAGACCCAGAAAGCATGAGCTTATTCGACG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAATCATCCCCAGAGTATaGCAATTGGAACAAAACAAA +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQIIPRV*QLEQNK
Trigger: TTTGTTTTGTTCCAATTGGCATACTCTGGGGATGAT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTACAATCAGTCGAATCTaGCTTGGATCAAACTCTGGT +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSTISRI*LGSNSG
Trigger: ACCAGAGTTTGATCCAAGCCAGATTCGACTGATTGT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTTCCAGGCATGTCCATTaGGTTGCTGTGAACTATATT +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSSRHVH*VAVNYI
Trigger: AATATAGTTCACAGCAACCCAATGGACATGCCTGGA...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307968.11
CDS-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATGCAGTAATGAGAGCTaGCAAGAATTGATTTTTGGA +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQCSNES*QELIFG
Trigger: TCCAAAAATCAATTCTTGCCAGCTCTCATTACTGCA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCAGTTGTGCCCAAAGTaGGTTATATGGATGAGTCTT +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSQLCPK*VIWMSL
Trigger: AAGACTCATCCATATAACCCACTTTGGGCACAACTG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTAGTAATTACTGTGCCTaGCATAACGATGGCTTCATC +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSSNYCA*HNDGFI
Trigger: GATGAAGCCATCGTTATGCCAGGCACAGTAATTACT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAATTTTGCCCAAGGAGTaGATGACTGCAATATTTACA +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQILPKE*MTAIFT
Trigger: TGTAAATATTGCAGTCATCCACTCCTTGGGCAAAAT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTTGCACATTTGTCTACTaGAACAGATCCTGTGCAAAC +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSCTFVY*NRSCAN
Trigger: GTTTGCACAGGATCTGTTCCAGTAGACAAATGTGCA...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTGACAGCTTCTGCTATTaGTTCATCCAAAACTGGATG +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSDSFCY*FIQNWM
Trigger: CATCCAGTTTTGGATGAACCAATAGCAGAAGCTGTC...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAGATTGGAAACAAGACTaGAAACCAATACTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQDWKQD*KPILPF
Trigger: GAAAGGAAGTATTGGTTTCCAGTCTTGTTTCCAATC...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCGTCTTTCACAGTCTTaGTATACAATCAGTCGAATC +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSRLSQS*YTISRI
Trigger: GATTCGACTGATTGTATATCAAGACTGTGAAAGACG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTAGAGCTGGCAAGAATTaGTTTTTGGAAGCATTTTCC +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSRAGKN*FLEAFS
Trigger: GGAAAATGCTTCCAAAAATCAATTCTTGCCAGCTCT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTAAAGCAGGTTTTACATaGATCTTGGGGAACTGTTTC +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSKAGFT*ILGNCF
Trigger: GAAACAGTTCCCCAAGATTCATGTAAAACCTGCTTT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCTGACCAACACATGGTaGAATCTCATCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSLTNTW*NLISTK
Trigger: TTTAGTAGAGATGAGATTTCACCATGTGTTGGTCAG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTGCATGTCCATTGGGTTaGTGTGAACTATATTTCCAA +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSACPLG*CELYFQ
Trigger: TTGGAAATATAGTTCACAGCAACCCAATGGACATGC...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307968.11
CDS-3UTR GCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAACAAGGAGTGGATGACTaGAATATTTACAGTTACAAT +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQQGVDD*NIYSYN
Trigger: ATTGTAACTGTAAATATTGCAGTCATCCACTCCTTG...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATTAAAGGAGTATTTGTaGAACATATGGAGAGTGAGT +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQLKEYL*NIWRVS
Trigger: ACTCACTCTCCATATGTTGCACAAATACTCCTTTAA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAGATGAATTTTTAAGGTaGATCCTTTGTAGCTCATTG +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQDEFLR*ILCSSL
Trigger: CAATGAGCTACAAAGGATCCACCTTAAAAATTCATC...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTAGGTTCTCCAATTCGTaGCATCGTGTAAAGATTACA +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSRFSNS*HRVKIT
Trigger: TGTAATCTTTACACGATGCCACGAATTGGAGAACCT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTGAAGGAGAAATCATCTaGCACTCATCTGAAATTCCT +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSEGEII*HSSEIP
Trigger: AGGAATTTCAGATGAGTGCCAGATGATTTCTCCTTC...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCAACTGTCTCTAACTTaGCGTCAAAGCAAGTTCTTA +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSQLSLT*RQSKFL
Trigger: TAAGAACTTGCTTTGACGCCAAGTTAGAGACAGTTG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTAAAGTAACCTTTGTCTaGGCAGCCTCACAAGAAAAT +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSKVTFV*AASQEN
Trigger: ATTTTCTTGTGAGGCTGCCCAGACAAAGGTTACTTT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATATAAAGCTGAAGTGTaGAATGAAGCAGATTGGAAA +
Preference number: 4 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQYKAEV*NEADWK
Trigger: TTTCCAATCTGCTTCATTCCACACTTCAGCTTTATA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTTATTTGTGCAACATATaGAGAGTGAGTGCTTGCTAC +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSYLCNI*RVSACY
Trigger: GTAGCAAGCACTCACTCTCCATATGTTGCACAAATA...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTTTCATCTTTGGACAATaGAAAGATTACCCCAATTGC +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSFIFGQ*KDYPNC
Trigger: GCAATTGGGGTAATCTTTTCATTGTCCAAAGATGAA...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTGACAAGGACATACTCTaGTTCTTCTATTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSDKDIL*FFYFTF
Trigger: AAAGGTGAAATAGAAGAATCAGAGTATGTCCTTGTC...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR TCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTTGTCTAGTCATATCATaGCCTGTATCTTCACTTTCA +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSCLVIS*PVSSLS
Trigger: TGAAAGTGAAGATACAGGTCATGATATGACTAGACA...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTAAAGATTACCCCAATTaGAATCTTCTTTTTCCGCAC +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSKDYPN*NLLFPH
Trigger: GTGCGGAAAAAGAAGATTGCAATTGGGGTAATCTTT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCTGCTTTTGTTTCTATaGATTGTGACAAGGACATAC +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSLLLFL*IVTRTY
Trigger: GTATGTCCTTGTCACAATGCATAGAAACAAAAGCAG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
CDS-3UTR GCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTATCATCCCCAGAGTATaGCAATTGGAACAAAACAAA +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSIIPRV*QLEQNK
Trigger: TTTGTTTTGTTCCAATTGGCATACTCTGGGGATGAT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTTGCAGTAATGAGAGCTaGCAAGAATTGATTTTTGGA +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSCSNES*QELIFG
Trigger: TCCAAAAATCAATTCTTGCCAGCTCTCATTACTGCA...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTATTTTGCCCAAGGAGTaGATGACTGCAATATTTACA +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSILPKE*MTAIFT
Trigger: TGTAAATATTGCAGTCATCCACTCCTTGGGCAAAAT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTGATTGGAAACAAGACTaGAAACCAATACTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSDWKQD*KPILPF
Trigger: GAAAGGAAGTATTGGTTTCCAGTCTTGTTTCCAATC...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCAAGGAGTGGATGACTaGAATATTTACAGTTACAAT +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSQGVDD*NIYSYN
Trigger: ATTGTAACTGTAAATATTGCAGTCATCCACTCCTTG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR GCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTTTAAAGGAGTATTTGTaGAACATATGGAGAGTGAGT +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSLKEYL*NIWRVS
Trigger: ACTCACTCTCCATATGTTGCACAAATACTCCTTTAA...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTGATGAATTTTTAAGGTaGATCCTTTGTAGCTCATTG +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSDEFLR*ILCSSL
Trigger: CAATGAGCTACAAAGGATCCACCTTAAAAATTCATC...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CCA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTTATAAAGCTGAAGTGTaGAATGAAGCAGATTGGAAA +
Preference number: 4 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSYKAEV*NEADWK
Trigger: TTTCCAATCTGCTTCATTCCACACTTCAGCTTTATA...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS CCA 90 bp CTCCACAACGCCAACGGAGCTGGAACGCAGCGCCCGGAGGACAACTaGTCACGGGGAGGAGGGGAGAACTTCGCGGCCCGGAGTACGGCG +
Preference number: 5 (lower is better)
Translates to: LHNANGAGTQRPEDN*SRGGGENFAARSTA
Trigger: CGCCGTACTCCGGGCCGCGAAGTTCTCCCCTCCTCCCCGTGACCAGTTGTCCTCCGGGCGCTGCGTTCCAGCTCCGTTGGCGTTGTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623690.1
CDS TCA 90 bp GTCACGGGGAGGAGGGGAGAACTTCGCGGCCCGGAGTACGGCGGCTaGGGTCCAATCCAGCCCGCGCCCAACTCTACTCGGTGCCAGGAA +
Preference number: 5 (lower is better)
Translates to: VTGRRGELRGPEYGG*GPIQPAPNSTRCQE
Trigger: TTCCTGGCACCGAGTAGAGTTGGGCGCGGGCTGGATTGGACCTCAGCCGCCGTACTCCGGGCCGCGAAGTTCTCCCCTCCTCCCCGTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623690.1
CDS CCA 90 bp AAGTCTCAGGCCGCGGTGCTAGGTCCGGAGGAGCAGAGTCGCGCGTaGCTGGGGGCAGGTCGTAAACAAACCGACGGGAGGAGGGGGAAG +
Preference number: 5 (lower is better)
Translates to: KSQAAVLGPEEQSRA*LGAGRKQTDGRRGK
Trigger: CTTCCCCCTCCTCCCGTCGGTTTGTTTACGACCTGCCCCCAGCCACGCGCGACTCTGCTCCTCCGGACCTAGCACCGCGGCCTGAGACTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000623690.1
CDS CCA 90 bp GAAGCTTGGCCAAACGTGCCGCTCTCTCCACAACGCCAACGGAGCTaGAACGCAGCGCCCGGAGGACAACTGGTCACGGGGAGGAGGGGA +
Preference number: 5 (lower is better)
Translates to: EAWPNVPLSPQRQRS*NAAPGGQLVTGRRG
Trigger: TCCCCTCCTCCCCGTGACCAGTTGTCCTCCGGGCGCTGCGTTCCAGCTCCGTTGGCGTTGTGGAGAGAGCGGCACGTTTGGCCAAGCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623690.1
CDS TCA 90 bp TCGGTCCGGTTACTGCACACCTCCAATTTTAGCGTCCAAGAAACCTaGAAGAACGGCACGTTGCCTACTCGCTCCTCCAGCCTTCTCTCA +
Preference number: 5 (lower is better)
Translates to: SVRLLHTSNFSVQET*KNGTLPTRSSSLLS
Trigger: TGAGAGAAGGCTGGAGGAGCGAGTAGGCAACGTGCCGTTCTTTCAGGTTTCTTGGACGCTAAAATTGGAGGTGTGCAGTAACCGGACCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623690.1
CDS-3UTR CAA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAACGCTCCGCTGGGCGCTaGCTAGGCCCCTGCTCCTAC +
Preference number: 5 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQRSAGR*LGPCSY
Trigger: GTAGGAGCAGGGGCCTAGCAAGCGCCCAGCGGAGCG...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510461.6
ENST00000615660.4
CDS TCA 90 bp GTGGAAGATCACTGGATTCAATCCCCAGAACCACTCCCAGCTCCTTaGCATGAACACGCATCTGCCCCCTCAGGTATTCAGACAGCATTT +
Preference number: 5 (lower is better)
Translates to: VEDHWIQSPEPLPAP*HEHASAPSGIQTAF
Trigger: AAATGCTGTCTGAATACCTGAGGGGGCAGATGCGTGTTCATGTCAAGGAGCTGGGAGTGGTTCTGGGGATTGAATCCAGTGATCTTCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS CCA 90 bp GCACATAAGATGAGCAGTAGCCACCCAGCAAGGACCTCCCGAAGTTaGCAATGTTGGGCTGAACAGCACTCACTTCGATTAACTTTGACC +
Preference number: 5 (lower is better)
Translates to: AHKMSSSHPARTSRS*QCWAEQHSLRLTLT
Trigger: GGTCAAAGTTAATCGAAGTGAGTGCTGTTCAGCCCAACATTGCCAACTTCGGGAGGTCCTTGCTGGGTGGCTACTGCTCATCTTATGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAACCCAGCCCGGTCCTCTaGCTGAAGAGCTTCTGGAAC +
Preference number: 5 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQPSPVL*LKSFWN
Trigger: GTTCCAGAAGCTCTTCAGCAAGAGGACCGGGCTGGG...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS GCA 90 bp TCACATTTCTCCTTCGATAACATTAAGGTCGCTCGGTCCGGTTACTaGACACCTCCAATTTTAGCGTCCAAGAAACCTGAAAGAACGGCA +
Preference number: 5 (lower is better)
Translates to: SHFSFDNIKVARSGY*TPPILASKKPERTA
Trigger: TGCCGTTCTTTCAGGTTTCTTGGACGCTAAAATTGGAGGTGTGCAGTAACCGGACCGAGCGACCTTAATGTTATCGAAGGAGAAATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623690.1
CDS CCA 90 bp AAAGGTGAACTCCTTCATGAAACGATAGCAAAGGTGGTTCTTTTCTaGAGTCCCCGACATCATTGTAAGCCAGACAGGTTCTCCAATTCG +
Preference number: 5 (lower is better)
Translates to: KGELLHETIAKVVLF*SPRHHCKPDRFSNS
Trigger: CGAATTGGAGAACCTGTCTGGCTTACAATGATGTCGGGGACTCCAGAAAAGAACCACCTTTGCTATCGTTTCATGAAGGAGTTCACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000511848.1
ENST00000615660.4
CDS-3UTR CAA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCCCAGCCCGGTCCTCTaGCTGAAGAGCTTCTGGAAC +
Preference number: 5 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSPSPVL*LKSFWN
Trigger: GTTCCAGAAGCTCTTCAGCAAGAGGACCGGGCTGGG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAACAACTACCACAGTCCTaGCTAACCGTACGGGAGAGC +
Preference number: 5 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQQLPQS*LTVRES
Trigger: GCTCTCCCGTACGGTTAGCAAGGACTGTGGTAGTTG...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAAGGCAGGAGAATCACTaGAACTGGGAGGCGGAGGTT +
Preference number: 5 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQRQENH*NWEAEV
Trigger: AACCTCCGCCTCCCAGTTCAAGTGATTCTCCTGCCT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS CCA 90 bp GAATCAGGTGACATAGAATCCCCAATCAGGAAAGTAACCTTTGTCTaGGCAGCCTCACAAGAAAATGAAGCAGGCACAATCTTATCTGGA +
Preference number: 5 (lower is better)
Translates to: ESGDIESPIRKVTFV*AASQENEAGTILSG
Trigger: TCCAGATAAGATTGTGCCTGCTTCATTTTCTTGTGAGGCTGCCCAGACAAAGGTTACTTTCCTGATTGGGGATTCTATGTCACCTGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAACTGTCTCTGTCCTCATaGAGCTCTCTTCCAGGCATG +
Preference number: 5 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQLSLSS*SSLPGM
Trigger: CATGCCTGGAAGAGAGCTCAATGAGGACAGAGACAG...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAACCTCTGGACCATGTCTaGTCGTTTGCCAACTACCAC +
Preference number: 5 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQPLDHV*SFANYH
Trigger: GTGGTAGTTGGCAAACGACAAGACATGGTCCAGAGG...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAATGGAGAGTGAGTGCTaGCTACAGCAGCCAGAAGTG +
Preference number: 5 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQMESEC*LQQPEV
Trigger: CACTTCTGGCTGCTGTAGCAAGCACTCACTCTCCAT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS TCA 90 bp CTTCTTTTTCCGCACAATTCCTGGGTTAGGGCCACAGCTTTCATCTaGGAGATTAAAGCTTTCTTCTATAGACCATCTAGGAAATACCCC +
Preference number: 5 (lower is better)
Translates to: LLFPHNSWVRATAFI*EIKAFFYRPSRKYP
Trigger: GGGGTATTTCCTAGATGGTCTATAGAAGAAAGCTTTAATCTCTCAGATGAAAGCTGTGGCCCTAACCCAGGAATTGTGCGGAAAAAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000511848.1
ENST00000615660.4
CDS-3UTR CAA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATCCTCCAGGTTTCAGTaGGCAGCATTTCCCAAAGAC +
Preference number: 5 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQSSRFQ*AAFPKD
Trigger: GTCTTTGGGAAATGCTGCCAACTGAAACCTGGAGGA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAACGAGCAGTAAACACTTaGCTGAGCATGAGCTGTGGA +
Preference number: 5 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQRAVNT*LSMSCG
Trigger: TCCACAGCTCATGCTCAGCAAAGTGTTTACTGCTCG...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCAACTACCACAGTCCTaGCTAACCGTACGGGAGAGC +
Preference number: 5 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSQLPQS*LTVRES
Trigger: GCTCTCCCGTACGGTTAGCAAGGACTGTGGTAGTTG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAGCCATGTTTCCTCTGTaGACTCTAAGCCTGACTCTG +
Preference number: 5 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQAMFPL*TLSLTL
Trigger: CAGAGTCAGGCTTAGAGTCAACAGAGGAAACATGGC...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAGGAGAGTGTATCTCTTaGGTCCTGCTGAGGAAAGCA +
Preference number: 5 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQGECIS*VLLRKA
Trigger: TGCTTTCCTCAGCAGGACCAAAGAGATACACTCTCC...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAATCCACAAACACTCCTaGGCAGCAAGTCATCCATGG +
Preference number: 5 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQIHKHS*AASHPW
Trigger: CCATGGATGACTTGCTGCCAAGGAGTGTTTGTGGAT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTAGGCAGGAGAATCACTaGAACTGGGAGGCGGAGGTT +
Preference number: 5 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSRQENH*NWEAEV
Trigger: AACCTCCGCCTCCCAGTTCAAGTGATTCTCCTGCCT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATTCCAGGCATGTCCATaGGGTTGCTGTGAACTGCAA +
Preference number: 5 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQFQACP*GCCELQ
Trigger: TTGCAGTTCACAGCAACCCAATGGACATGCCTGGAA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307954.12
ENST00000510461.6
ENST00000615660.4
CDS GCA 90 bp ATTTGGCATGACTGTTGGAACCCAGGCAAGATGATTGGTCAGAACTaGAGTAATGAGAGCTGGCAAGAATTGATTTTTGGAAGCATTTTC +
Preference number: 5 (lower is better)
Translates to: IWHDCWNPGKMIGQN*SNESWQELIFGSIF
Trigger: GAAAATGCTTCCAAAAATCAATTCTTGCCAGCTCTCATTACTGCAGTTCTGACCAATCATCTTGCCTGGGTTCCAACAGTCATGCCAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000511848.1
ENST00000615660.4
CDS GCA 90 bp AGCCTGACTCTGACAATGCACATTTGTCTACTGGAACAGATCCTGTaGAAACAACTGTCTCTAACTTGGCGTCAAAGCAAGTTCTTAATT +
Preference number: 5 (lower is better)
Translates to: SLTLTMHICLLEQIL*KQLSLTWRQSKFLI
Trigger: AATTAAGAACTTGCTTTGACGCCAAGTTAGAGACAGTTGTTTGCACAGGATCTGTTCCAGTAGACAAATGTGCATTGTCAGAGTCAGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAATCTCTCCAAGCATATaGGCATCAGAAGAGCACCGA +
Preference number: 5 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQISPSI*ASEEHR
Trigger: TCGGTGCTCTTCTGATGCCAATATGCTTGGAGAGAT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCTGTCTCTGTCCTCATaGAGCTCTCTTCCAGGCATG +
Preference number: 5 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSLSLSS*SSLPGM
Trigger: CATGCCTGGAAGAGAGCTCAATGAGGACAGAGACAG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTTTCCAAACTTGTTGTTaGGCTGCGTCGCCAACGTCG +
Preference number: 5 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSFQTCC*AASPTS
Trigger: CGACGTTGGCGACGCAGCCAAACAACAAGTTTGGAA...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAACCATGTCTTGTCGTTaGCCAACTACCACAGTCCTT +
Preference number: 5 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQTMSCR*PTTTVL
Trigger: AAGGACTGTGGTAGTTGGCAAACGACAAGACATGGT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCCTCTGGACCATGTCTaGTCGTTTGCCAACTACCAC +
Preference number: 5 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSPLDHV*SFANYH
Trigger: GTGGTAGTTGGCAAACGACAAGACATGGTCCAGAGG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAACTGGCTACTGGCCACTaGAACAGTCCATTTATCCAT +
Preference number: 5 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQLATGH*NSPFIH
Trigger: ATGGATAAATGGACTGTTCAAGTGGCCAGTAGCCAG...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTATGGAGAGTGAGTGCTaGCTACAGCAGCCAGAAGTG +
Preference number: 5 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSMESEC*LQQPEV
Trigger: CACTTCTGGCTGCTGTAGCAAGCACTCACTCTCCAT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAACATGGGCCAAACAGATaGCAGACACACCAATTTCAG +
Preference number: 5 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQHGPNR*QTHQFQ
Trigger: CTGAAATTGGTGTGTCTGCAATCTGTTTGGCCCATG...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS TCA 90 bp AATTCATTTAGGGCATCAACTATTCGATTATATGCCAAACTTCTCTaGCTGGCATCAGCTGATCTCCGGCTCATTTTCATAGCCTGTTCT +
Preference number: 5 (lower is better)
Translates to: NSFRASTIRLYAKLL*LASADLRLIFIACS
Trigger: AGAACAGGCTATGAAAATGAGCCGGAGATCAGCTGATGCCAGTCAGAGAAGTTTGGCATATAATCGAATAGTTGATGCCCTAAATGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000511848.1
ENST00000615660.4
CDS-3UTR CAA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATCAGTCGAATCTGGCTaGGATCAAACTCTGGTAAAG +
Preference number: 5 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQSVESG*DQTLVK
Trigger: CTTTACCAGAGTTTGATCCAAGCCAGATTCGACTGA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAACCCAAAGACTTTAACTaGAGCATCACTGCCGAGTTT +
Preference number: 5 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQPKDFN*SITAEF
Trigger: AAACTCGGCAGTGATGCTCAAGTTAAAGTCTTTGGG...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTTCCTCCAGGTTTCAGTaGGCAGCATTTCCCAAAGAC +
Preference number: 5 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSSSRFQ*AAFPKD
Trigger: GTCTTTGGGAAATGCTGCCAACTGAAACCTGGAGGA...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCGAGCAGTAAACACTTaGCTGAGCATGAGCTGTGGA +
Preference number: 5 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSRAVNT*LSMSCG
Trigger: TCCACAGCTCATGCTCAGCAAAGTGTTTACTGCTCG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATTCCAGGCATGTCCATaGGGTTGCTGTGAACTATAT +
Preference number: 5 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQFQACP*GCCELY
Trigger: ATATAGTTCACAGCAACCCAATGGACATGCCTGGAA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307968.11
CDS-3UTR CAA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAATACAAGTCTCCCAGTaGTGCCCAAAGTGGGTTATA +
Preference number: 5 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQIQVSQ*CPKWVI
Trigger: TATAACCCACTTTGGGCACAACTGGGAGACTTGTAT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTGCCATGTTTCCTCTGTaGACTCTAAGCCTGACTCTG +
Preference number: 5 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSAMFPL*TLSLTL
Trigger: CAGAGTCAGGCTTAGAGTCAACAGAGGAAACATGGC...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTGGAGAGTGTATCTCTTaGGTCCTGCTGAGGAAAGCA +
Preference number: 5 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSGECIS*VLLRKA
Trigger: TGCTTTCCTCAGCAGGACCAAAGAGATACACTCTCC...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTATCCACAAACACTCCTaGGCAGCAAGTCATCCATGG +
Preference number: 5 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSIHKHS*AASHPW
Trigger: CCATGGATGACTTGCTGCCAAGGAGTGTTTGTGGAT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTTTCCAGGCATGTCCATaGGGTTGCTGTGAACTGCAA +
Preference number: 5 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSFQACP*GCCELQ
Trigger: TTGCAGTTCACAGCAACCCAATGGACATGCCTGGAA...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307954.12
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTATCTCTCCAAGCATATaGGCATCAGAAGAGCACCGA +
Preference number: 5 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSISPSI*ASEEHR
Trigger: TCGGTGCTCTTCTGATGCCAATATGCTTGGAGAGAT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATATATGGATGAGTCTTaGCCAACATGTCCACACTCT +
Preference number: 5 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQYMDES*PTCPHS
Trigger: AGAGTGTGGACATGTTGGCAAAGACTCATCCATATA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTACCATGTCTTGTCGTTaGCCAACTACCACAGTCCTT +
Preference number: 5 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSTMSCR*PTTTVL
Trigger: AAGGACTGTGGTAGTTGGCAAACGACAAGACATGGT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAACAACTGTCTCTAACTaGGCGTCAAAGCAAGTTCTT +
Preference number: 5 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQTTVSN*ASKQVL
Trigger: AAGAACTTGCTTTGACGCCAAGTTAGAGACAGTTGT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATCTGACAATGCACATTaGTCTACTGGAACAGATCCT +
Preference number: 5 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQSDNAH*STGTDP
Trigger: AGGATCTGTTCCAGTAGACAAATGTGCATTGTCAGA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATTCTGCCCAATCTTCTaGCTCTCCTCCATAATAACT +
Preference number: 5 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQFCPIF*LSSIIT
Trigger: AGTTATTATGGAGGAGAGCAAGAAGATTGGGCAGAA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCTGGCTACTGGCCACTaGAACAGTCCATTTATCCAT +
Preference number: 5 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSLATGH*NSPFIH
Trigger: ATGGATAAATGGACTGTTCAAGTGGCCAGTAGCCAG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCATGGGCCAAACAGATaGCAGACACACCAATTTCAG +
Preference number: 5 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSHGPNR*QTHQFQ
Trigger: CTGAAATTGGTGTGTCTGCAATCTGTTTGGCCCATG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTTCAGTCGAATCTGGCTaGGATCAAACTCTGGTAAAG +
Preference number: 5 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSSVESG*DQTLVK
Trigger: CTTTACCAGAGTTTGATCCAAGCCAGATTCGACTGA...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCCCAAAGACTTTAACTaGAGCATCACTGCCGAGTTT +
Preference number: 5 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSPKDFN*SITAEF
Trigger: AAACTCGGCAGTGATGCTCAAGTTAAAGTCTTTGGG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTATACAAGTCTCCCAGTaGTGCCCAAAGTGGGTTATA +
Preference number: 5 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSIQVSQ*CPKWVI
Trigger: TATAACCCACTTTGGGCACAACTGGGAGACTTGTAT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAACTCCTTAGAGCTGTTTaGAATATCTTCTCTCTCTTG +
Preference number: 5 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQLLRAV*NIFSLL
Trigger: CAAGAGAGAGAAGATATTCAAAACAGCTCTAAGGAG...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAAACAGCATTTTCTTCTaGGCAGTCAGAAGGAGAAAT +
Preference number: 5 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQNSIFF*AVRRRN
Trigger: ATTTCTCCTTCTGACTGCCAAGAAGAAAATGCTGTT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATGTTTGTTTAGTTTCTaGATGCTGATCAATAGCCCC +
Preference number: 5 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQCLFSF*MLINSP
Trigger: GGGGCTATTGATCAGCATCAAGAAACTAAACAAACA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATCACTTCGATTAACTTaGACCCAGGAAAAGGTATCT +
Preference number: 5 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQSLRLT*TQEKVS
Trigger: AGATACCTTTTCCTGGGTCAAAGTTAATCGAAGTGA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAGACAGCATTTTACTTTaGAAGTATAGCTCCTGCAAC +
Preference number: 5 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQDSILL*KYSSCN
Trigger: GTTGCAGGAGCTATACTTCAAAAGTAAAATGCTGTC...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAACCCAGAGTATGCCAATaGGAACAAAACAAAATCTGT +
Preference number: 5 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQPRVCQ*EQNKIC
Trigger: ACAGATTTTGTTTTGTTCCAATTGGCATACTCTGGG...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATCGTCTTTCACAGTCTaGATATACAATCAGTCGAAT +
Preference number: 5 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQSSFTV*IYNQSN
Trigger: ATTCGACTGATTGTATATCAAGACTGTGAAAGACGA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCTATCTTGTAGCGTATaGAGACTCCCACAAATACTG +
Preference number: 5 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSLSCSV*RLPQIL
Trigger: CAGTATTTGTGGGAGTCTCAATACGCTACAAGATAG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAATATTTTTATAGGTGGTaGTCCATTTGGCATGACTGT +
Preference number: 5 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQYFYRW*SIWHDC
Trigger: ACAGTCATGCCAAATGGACAACCACCTATAAAAATA...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp GGGCCAAACAGATTGCAGACACACCAATTTCAGGTTTACATTCCATTAAAACAAAAGAGCAAACTGCTTTaGTTTCTATGCATTGTGACA +
Preference number: 5 (lower is better)
Translates to: GPNRLQTHQFQVYIPLKQKSKLL*FLCIVT
Trigger: TGTCACAATGCATAGAAACAAAAGCAGTTTGCTCTT...TTGTTTTAATGGAATGTAAACCTGAAATTGGTGTGTCTGCAATCTGTTTGGCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
CDS-3UTR CAA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTACAACTGTCTCTAACTaGGCGTCAAAGCAAGTTCTT +
Preference number: 5 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSTTVSN*ASKQVL
Trigger: AAGAACTTGCTTTGACGCCAAGTTAGAGACAGTTGT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTTCTGACAATGCACATTaGTCTACTGGAACAGATCCT +
Preference number: 5 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSSDNAH*STGTDP
Trigger: AGGATCTGTTCCAGTAGACAAATGTGCATTGTCAGA...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTTTCTGCCCAATCTTCTaGCTCTCCTCCATAATAACT +
Preference number: 5 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSFCPIF*LSSIIT
Trigger: AGTTATTATGGAGGAGAGCAAGAAGATTGGGCAGAA...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS TCA 90 bp CTCTCTTGTTGTGAAATGTTCTCTACATTTTGCCCAAGGAGTGGATaGCTGCAATATTTACAGTTACAATTGGGAGTTCTAATTTCTTCT +
Preference number: 5 (lower is better)
Translates to: LSCCEMFSTFCPRSG*LQYLQLQLGVLISS
Trigger: AGAAGAAATTAGAACTCCCAATTGTAACTGTAAATATTGCAGTCATCCACTCCTTGGGCAAAATGTAGAGAACATTTCACAACAAGAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCTCCTTAGAGCTGTTTaGAATATCTTCTCTCTCTTG +
Preference number: 5 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSLLRAV*NIFSLL
Trigger: CAAGAGAGAGAAGATATTCAAAACAGCTCTAAGGAG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTAACAGCATTTTCTTCTaGGCAGTCAGAAGGAGAAAT +
Preference number: 5 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSNSIFF*AVRRRN
Trigger: ATTTCTCCTTCTGACTGCCAAGAAGAAAATGCTGTT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTTGTTTGTTTAGTTTCTaGATGCTGATCAATAGCCCC +
Preference number: 5 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSCLFSF*MLINSP
Trigger: GGGGCTATTGATCAGCATCAAGAAACTAAACAAACA...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTTCACTTCGATTAACTTaGACCCAGGAAAAGGTATCT +
Preference number: 5 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSSLRLT*TQEKVS
Trigger: AGATACCTTTTCCTGGGTCAAAGTTAATCGAAGTGA...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTGACAGCATTTTACTTTaGAAGTATAGCTCCTGCAAC +
Preference number: 5 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSDSILL*KYSSCN
Trigger: GTTGCAGGAGCTATACTTCAAAAGTAAAATGCTGTC...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTCCCAGAGTATGCCAATaGGAACAAAACAAAATCTGT +
Preference number: 5 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSPRVCQ*EQNKIC
Trigger: ACAGATTTTGTTTTGTTCCAATTGGCATACTCTGGG...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS-3UTR CAA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTAAGAGCAAACTGCTTTaGTTTCTATGCATTGTGACA +
Preference number: 5 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSKSKLL*FLCIVT
Trigger: TGTCACAATGCATAGAAACAAAAGCAGTTTGCTCTT...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
CDS-3UTR CAA 90 bp CCCACCTTTCTATTTACATTACTTACAAGAGTTTGGTTCCATATTAGCCTTTCTGTTTTTGCCGATGCTTaGGTGCAATTTTTAATCCTA +
Preference number: 5 (lower is better)
Translates to: PTFLFTLLTRVWFHISLSVFADA*VQFLIL
Trigger: TAGGATTAAAAATTGCACCAAAGCATCGGCAAAAAC...AGAAAGGCTAATATGGAACCAAACTCTTGTAAGTAATGTAAATAGAAAGGTGGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS GCA 72 bp CCCGCAGCCGGCTCCACCCCACCGAGGACCAGATGCTaGTCTCGGCGCGGCGCTTCCGCTCGGGTCGGAACA +
Preference number: 6 (lower is better)
Translates to: PAAGSTPPRTRC*SRRGASARVGT
Trigger: TGTTCCGACCCGAGCGGAAGCGCCGCGCCGAGAGCAGCATCTGGTCCTCGGTGGGGTGGAGCCGGCTGCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623690.1
CDS CCA 72 bp GCCATGCTAGCCACGGCCAGGCAGGGGTCGCTCCGCTaGGCGCTTGCTAGGCCCCTGCTCCTACAGCCGCCC +
Preference number: 6 (lower is better)
Translates to: AMLATARQGSLR*ALARPLLLQPP
Trigger: GGGCGGCTGTAGGAGCAGGGGCCTAGCAAGCGCCCAGCGGAGCGACCCCTGCCTGGCCGTGGCTAGCATGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510461.6
ENST00000511848.1
ENST00000615660.4
CDS CCA 72 bp CCGCTCGGGTCGGAACACCGAAGGCCCCAACACCCCTaGAGCCCGGAGCCCACAAGGCCATCGGCTCCGCGA +
Preference number: 6 (lower is better)
Translates to: PLGSEHRRPQHP*SPEPTRPSAPR
Trigger: TCGCGGAGCCGATGGCCTTGTGGGCTCCGGGCTCCAGGGGTGTTGGGGCCTTCGGTGTTCCGACCCGAGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623690.1
CDS CCA 72 bp GCCAACGGAGCTGGAACGCAGCGCCCGGAGGACAACTaGTCACGGGGAGGAGGGGAGAACTTCGCGGCCCGG +
Preference number: 6 (lower is better)
Translates to: ANGAGTQRPEDN*SRGGGENFAAR
Trigger: CCGGGCCGCGAAGTTCTCCCCTCCTCCCCGTGACCAGTTGTCCTCCGGGCGCTGCGTTCCAGCTCCGTTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623690.1
CDS CCA 72 bp GCCGCGGTGCTAGGTCCGGAGGAGCAGAGTCGCGCGTaGCTGGGGGCAGGTCGTAAACAAACCGACGGGAGG +
Preference number: 6 (lower is better)
Translates to: AAVLGPEEQSRA*LGAGRKQTDGR
Trigger: CCTCCCGTCGGTTTGTTTACGACCTGCCCCCAGCCACGCGCGACTCTGCTCCTCCGGACCTAGCACCGCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623690.1
CDS TCA 72 bp AGGAGGGGAGAACTTCGCGGCCCGGAGTACGGCGGCTaGGGTCCAATCCAGCCCGCGCCCAACTCTACTCGG +
Preference number: 6 (lower is better)
Translates to: RRGELRGPEYGG*GPIQPAPNSTR
Trigger: CCGAGTAGAGTTGGGCGCGGGCTGGATTGGACCTCAGCCGCCGTACTCCGGGCCGCGAAGTTCTCCCCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623690.1
CDS CCA 72 bp CCAAACGTGCCGCTCTCTCCACAACGCCAACGGAGCTaGAACGCAGCGCCCGGAGGACAACTGGTCACGGGG +
Preference number: 6 (lower is better)
Translates to: PNVPLSPQRQRS*NAAPGGQLVTG
Trigger: CCCCGTGACCAGTTGTCCTCCGGGCGCTGCGTTCCAGCTCCGTTGGCGTTGTGGAGAGAGCGGCACGTTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623690.1
CDS TCA 72 bp AGCCGCCCCGCCACCCCCATGGGCGCCTCAGTCATATaGCAGAAATTAGTCACTTCAAACGGCCACGGCGCG +
Preference number: 6 (lower is better)
Translates to: SRPATPMGASVI*QKLVTSNGHGA
Trigger: CGCGCCGTGGCCGTTTGAAGTGACTAATTTCTGTCATATGACTGAGGCGCCCATGGGGGTGGCGGGGCGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615660.4
CDS GCA 72 bp AAGAAAGAGGCGCTCCTGATCAGGCGGAGCGGACCCTaGTCAGAGAATGCCCGCCTGGGGCTGCAGAACTGT +
Preference number: 6 (lower is better)
Translates to: KKEALLIRRSGP*SENARLGLQNC
Trigger: ACAGTTCTGCAGCCCCAGGCGGGCATTCTCTGAGCAGGGTCCGCTCCGCCTGATCAGGAGCGCCTCTTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000510461.6
ENST00000511848.1
ENST00000615660.4
CDS GCA 72 bp TCCAGCCTTCTCTCAACTCAGAAGCTTGGCCAAACGTaGCGCTCTCTCCACAACGCCAACGGAGCTGGAACG +
Preference number: 6 (lower is better)
Translates to: SSLLSTQKLGQT*RSLHNANGAGT
Trigger: CGTTCCAGCTCCGTTGGCGTTGTGGAGAGAGCGGCACGTTTGGCCAAGCTTCTGAGTTGAGAGAAGGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623690.1
CDS CCA 72 bp TCAGGCGGAGCGGACCCTGCTCAGAGAATGCCCGCCTaGGGCTGCAGAACTGTGAAAGACCTATATTTCCAA +
Preference number: 6 (lower is better)
Translates to: SGGADPAQRMPA*GCRTVKDLYFQ
Trigger: TTGGAAATATAGGTCTTTCACAGTTCTGCAGCCCCAGGCGGGCATTCTCTGAGCAGGGTCCGCTCCGCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000510461.6
ENST00000511848.1
ENST00000615660.4
CDS CCA 72 bp ATGAGCAGTAGCCACCCAGCAAGGACCTCCCGAAGTTaGCAATGTTGGGCTGAACAGCACTCACTTCGATTA +
Preference number: 6 (lower is better)
Translates to: MSSSHPARTSRS*QCWAEQHSLRL
Trigger: TAATCGAAGTGAGTGCTGTTCAGCCCAACATTGCCAACTTCGGGAGGTCCTTGCTGGGTGGCTACTGCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS TCA 72 bp TTACTGCACACCTCCAATTTTAGCGTCCAAGAAACCTaGAAGAACGGCACGTTGCCTACTCGCTCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: LLHTSNFSVQET*KNGTLPTRSSS
Trigger: GCTGGAGGAGCGAGTAGGCAACGTGCCGTTCTTTCAGGTTTCTTGGACGCTAAAATTGGAGGTGTGCAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623690.1
CDS GCA 72 bp GAAAATAAAGTAGCCTCTGGACCATGTCTTGTCGTTTaGCAACTACCACAGTCCTTGCTAACCGTACGGGAG +
Preference number: 6 (lower is better)
Translates to: ENKVASGPCLVV*QLPQSLLTVRE
Trigger: CTCCCGTACGGTTAGCAAGGACTGTGGTAGTTGGCAAACGACAAGACATGGTCCAGAGGCTACTTTATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS TCA 72 bp ACAACCATTCCTGTGGATCTCATTGCTTTGCCTGTGTaGCTGTCTGAATCCAGCAACTTCTCACTCTGCCAT +
Preference number: 6 (lower is better)
Translates to: TTIPVDLIALPV*LSESSNFSLCH
Trigger: ATGGCAGAGTGAGAAGTTGCTGGATTCAGACAGTCACACAGGCAAAGCAATGAGATCCACAGGAATGGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS GCA 72 bp TCCTTCGATAACATTAAGGTCGCTCGGTCCGGTTACTaGACACCTCCAATTTTAGCGTCCAAGAAACCTGAA +
Preference number: 6 (lower is better)
Translates to: SFDNIKVARSGY*TPPILASKKPE
Trigger: TTCAGGTTTCTTGGACGCTAAAATTGGAGGTGTGCAGTAACCGGACCGAGCGACCTTAATGTTATCGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623690.1
CDS CCA 72 bp CTCCTTCATGAAACGATAGCAAAGGTGGTTCTTTTCTaGAGTCCCCGACATCATTGTAAGCCAGACAGGTTC +
Preference number: 6 (lower is better)
Translates to: LLHETIAKVVLF*SPRHHCKPDRF
Trigger: GAACCTGTCTGGCTTACAATGATGTCGGGGACTCCAGAAAAGAACCACCTTTGCTATCGTTTCATGAAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000511848.1
ENST00000615660.4
CDS CAA 90 bp GACTGTCTGAATCCAGCAACTTCTCACTCTGCCATGTTTCCTCTGTaGACTCTAAGCCTGACTCTGACAATGCACATTTGTCTACTGGAA +
Preference number: 6 (lower is better)
Translates to: DCLNPATSHSAMFPL*TLSLTLTMHICLLE
Trigger: TTCCAGTAGACAAATGTGCATTGTCAGAGTCAGGCTTAGAGTCAACAGAGGAAACATGGCAGAGTGAGAAGTTGCTGGATTCAGACAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS GCA 72 bp GACTGTTGGAACCCAGGCAAGATGATTGGTCAGAACTaGAGTAATGAGAGCTGGCAAGAATTGATTTTTGGA +
Preference number: 6 (lower is better)
Translates to: DCWNPGKMIGQN*SNESWQELIFG
Trigger: TCCAAAAATCAATTCTTGCCAGCTCTCATTACTGCAGTTCTGACCAATCATCTTGCCTGGGTTCCAACAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000511848.1
ENST00000615660.4
CDS GCA 72 bp CTGACAATGCACATTTGTCTACTGGAACAGATCCTGTaGAAACAACTGTCTCTAACTTGGCGTCAAAGCAAG +
Preference number: 6 (lower is better)
Translates to: LTMHICLLEQIL*KQLSLTWRQSK
Trigger: CTTGCTTTGACGCCAAGTTAGAGACAGTTGTTTGCACAGGATCTGTTCCAGTAGACAAATGTGCATTGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS GCA 72 bp ATTAAAGGAGTATTTGTGCAACATATGGAGAGTGAGTaGTTGCTACAGCAGCCAGAAGTGGAAGATCACTGG +
Preference number: 6 (lower is better)
Translates to: IKGVFVQHMESE*LLQQPEVEDHW
Trigger: CCAGTGATCTTCCACTTCTGGCTGCTGTAGCAAGCACTCACTCTCCATATGTTGCACAAATACTCCTTTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS CAA 72 bp TCTGTTGACTCTAAGCCTGACTCTGACAATGCACATTaGTCTACTGGAACAGATCCTGTGCAAACAACTGTC +
Preference number: 6 (lower is better)
Translates to: SVDSKPDSDNAH*STGTDPVQTTV
Trigger: GACAGTTGTTTGCACAGGATCTGTTCCAGTAGACAAATGTGCATTGTCAGAGTCAGGCTTAGAGTCAACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS CAA 72 bp AATCCAGCAACTTCTCACTCTGCCATGTTTCCTCTGTaGACTCTAAGCCTGACTCTGACAATGCACATTTGT +
Preference number: 6 (lower is better)
Translates to: NPATSHSAMFPL*TLSLTLTMHIC
Trigger: ACAAATGTGCATTGTCAGAGTCAGGCTTAGAGTCAACAGAGGAAACATGGCAGAGTGAGAAGTTGCTGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS CAA 72 bp AAAGGAGTATTTGTGCAACATATGGAGAGTGAGTGCTaGCTACAGCAGCCAGAAGTGGAAGATCACTGGATT +
Preference number: 6 (lower is better)
Translates to: KGVFVQHMESEC*LQQPEVEDHWI
Trigger: AATCCAGTGATCTTCCACTTCTGGCTGCTGTAGCAAGCACTCACTCTCCATATGTTGCACAAATACTCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS CAA 90 bp CATGTTTCCTCTGTTGACTCTAAGCCTGACTCTGACAATGCACATTaGTCTACTGGAACAGATCCTGTGCAAACAACTGTCTCTAACTTG +
Preference number: 6 (lower is better)
Translates to: HVSSVDSKPDSDNAH*STGTDPVQTTVSNL
Trigger: CAAGTTAGAGACAGTTGTTTGCACAGGATCTGTTCCAGTAGACAAATGTGCATTGTCAGAGTCAGGCTTAGAGTCAACAGAGGAAACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS CAA 90 bp CTCTTCTGCCCAATCTTCTTGCTCTCCTCCATAATAACTGCTAACTaGTCTAGTCATATCATGACCTGTATCTTCACTTTCACTATCCCC +
Preference number: 6 (lower is better)
Translates to: LFCPIFLLSSIITAN*SSHIMTCIFTFTIP
Trigger: GGGGATAGTGAAAGTGAAGATACAGGTCATGATATGACTAGACAAGTTAGCAGTTATTATGGAGGAGAGCAAGAAGATTGGGCAGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS CAA 72 bp CTCTCCAGATTGGTCCTTGGTTGTTTGTTTAGTTTCTaGATGCTGATCAATAGCCCCTCTTTCTTCCTTCAA +
Preference number: 6 (lower is better)
Translates to: LSRLVLGCLFSF*MLINSPSFFLQ
Trigger: TTGAAGGAAGAAAGAGGGGCTATTGATCAGCATCAAGAAACTAAACAAACAACCAAGGACCAATCTGGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS CAA 90 bp TGTATCAGACTCTCCAGATTGGTCCTTGGTTGTTTGTTTAGTTTCTaGATGCTGATCAATAGCCCCTCTTTCTTCCTTCAATGGTTTGGT +
Preference number: 6 (lower is better)
Translates to: CIRLSRLVLGCLFSF*MLINSPSFFLQWFG
Trigger: ACCAAACCATTGAAGGAAGAAAGAGGGGCTATTGATCAGCATCAAGAAACTAAACAAACAACCAAGGACCAATCTGGAGAGTCTGATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS CAA 90 bp AACCATGTTCTGTGTATCAGACTCTCCAGATTGGTCCTTGGTTGTTaGTTTAGTTTCTTGATGCTGATCAATAGCCCCTCTTTCTTCCTT +
Preference number: 6 (lower is better)
Translates to: NHVLCIRLSRLVLGC*FSFLMLINSPSFFL
Trigger: AAGGAAGAAAGAGGGGCTATTGATCAGCATCAAGAAACTAAACAAACAACCAAGGACCAATCTGGAGAGTCTGATACACAGAACATGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS CCA 72 bp CTGGAACAGATCCTGTGCAAACAACTGTCTCTAACTTaGCGTCAAAGCAAGTTCTTAATTTATCTCTGTACT +
Preference number: 6 (lower is better)
Translates to: LEQILCKQLSLT*RQSKFLIYLCT
Trigger: AGTACAGAGATAAATTAAGAACTTGCTTTGACGCCAAGTTAGAGACAGTTGTTTGCACAGGATCTGTTCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS CAA 72 bp ACTGGAACAGATCCTGTGCAAACAACTGTCTCTAACTaGGCGTCAAAGCAAGTTCTTAATTTATCTCTGTAC +
Preference number: 6 (lower is better)
Translates to: TGTDPVQTTVSN*ASKQVLNLSLY
Trigger: GTACAGAGATAAATTAAGAACTTGCTTTGACGCCAAGTTAGAGACAGTTGTTTGCACAGGATCTGTTCCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS CAA 72 bp ATACATAGTGTAACAGTTGTCAGATTACATACCCAGTaGTGCCCAAAGTGGGTTATATGGATGAGTCTTTGC +
Preference number: 6 (lower is better)
Translates to: IHSVTVVRLHTQ*CPKWVIWMSLC
Trigger: GCAAAGACTCATCCATATAACCCACTTTGGGCACAACTGGGTATGTAATCTGACAACTGTTACACTATGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511848.1
CDS CAA 90 bp AAAAGTCTAATACATAGTGTAACAGTTGTCAGATTACATACCCAGTaGTGCCCAAAGTGGGTTATATGGATGAGTCTTTGCCAACATGTC +
Preference number: 6 (lower is better)
Translates to: KSLIHSVTVVRLHTQ*CPKWVIWMSLCQHV
Trigger: GACATGTTGGCAAAGACTCATCCATATAACCCACTTTGGGCACAACTGGGTATGTAATCTGACAACTGTTACACTATGTATTAGACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511848.1
CDS CAA 72 bp CCAATCTTCTTGCTCTCCTCCATAATAACTGCTAACTaGTCTAGTCATATCATGACCTGTATCTTCACTTTC +
Preference number: 6 (lower is better)
Translates to: PIFLLSSIITAN*SSHIMTCIFTF
Trigger: GAAAGTGAAGATACAGGTCATGATATGACTAGACAAGTTAGCAGTTATTATGGAGGAGAGCAAGAAGATTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS CAA 90 bp CATTTGTCTACTGGAACAGATCCTGTGCAAACAACTGTCTCTAACTaGGCGTCAAAGCAAGTTCTTAATTTATCTCTGTACTGTTTAACA +
Preference number: 6 (lower is better)
Translates to: HLSTGTDPVQTTVSN*ASKQVLNLSLYCLT
Trigger: TGTTAAACAGTACAGAGATAAATTAAGAACTTGCTTTGACGCCAAGTTAGAGACAGTTGTTTGCACAGGATCTGTTCCAGTAGACAAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS TCA 72 bp TGTGAAATGTTCTCTACATTTTGCCCAAGGAGTGGATaGCTGCAATATTTACAGTTACAATTGGGAGTTCTA +
Preference number: 6 (lower is better)
Translates to: CEMFSTFCPRSG*LQYLQLQLGVL
Trigger: TAGAACTCCCAATTGTAACTGTAAATATTGCAGTCATCCACTCCTTGGGCAAAATGTAGAGAACATTTCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6
ENST00000615660.4
CDS CAA 72 bp CTAATTTCTTCTGACTCTTTAAAGAGCAAACTGCTTTaGTTTCTATGCATTGTGACAAGGACATACTCTGAT +
Preference number: 6 (lower is better)
Translates to: LISSDSLKSKLL*FLCIVTRTYSD
Trigger: ATCAGAGTATGTCCTTGTCACAATGCATAGAAACAAAAGCAGTTTGCTCTTTAAAGAGTCAGAAGAAATTAG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307954.12
ENST00000307968.11
ENST00000510461.6