Pregenerated sensors for FNDC9 (Homo sapiens)
Ensembl gene IDs: ENSG00000172568Ensembl transcript IDs: ENST00000312349.5, ENST00000520782.1
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTGCCGAGCAGGGAATGCATGAGGTAGGCAAGGGAATAGGGATGTaGGGCTTCTCGTCTTGGCTTCTCAGCTCCTGCTGTTTCTTAGTT | + |
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Preference number: 1 (lower is better) Translates to: GAEQGMHEVGKGIGM*GFSSWLLSSCCFLV Trigger: AACTAAGAAACAGCAGGAGCTGAGAAGCCAAGACGAGAAGCCCCACATCCCTATTCCCTTGCCTACCTCATGCATTCCCTGCTCGGCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| 3UTR TCA 90 bp | GTGGGGCTTCTCGTCTTGGCTTCTCAGCTCCTGCTGTTTCTTAGTTaGTTCACTGCAGTGTCGTCCTGTGATTCTGGGATTTTGTGCTCT | + |
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Preference number: 1 (lower is better) Translates to: VGLLVLASQLLLFLS*FTAVSSCDSGILCS Trigger: AGAGCACAAAATCCCAGAATCACAGGACGACACTGCAGTGAATCAACTAAGAAACAGCAGGAGCTGAGAAGCCAAGACGAGAAGCCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| 3UTR GCA 90 bp | AAGGGAATAGGGATGTGGGGCTTCTCGTCTTGGCTTCTCAGCTCCTaGTGTTTCTTAGTTGATTCACTGCAGTGTCGTCCTGTGATTCTG | + |
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Preference number: 1 (lower is better) Translates to: KGIGMWGFSSWLLSS*CFLVDSLQCRPVIL Trigger: CAGAATCACAGGACGACACTGCAGTGAATCAACTAAGAAACAGCAGGAGCTGAGAAGCCAAGACGAGAAGCCCCACATCCCTATTCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| 3UTR CCA 90 bp | ATGCATGAGGTAGGCAAGGGAATAGGGATGTGGGGCTTCTCGTCTTaGCTTCTCAGCTCCTGCTGTTTCTTAGTTGATTCACTGCAGTGT | + |
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Preference number: 1 (lower is better) Translates to: MHEVGKGIGMWGFSS*LLSSCCFLVDSLQC Trigger: ACACTGCAGTGAATCAACTAAGAAACAGCAGGAGCTGAGAAGCCAAGACGAGAAGCCCCACATCCCTATTCCCTTGCCTACCTCATGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| 3UTR TCA 90 bp | TTCCAGCTTGAGAAGCTTTGTCATGGGGCATTCATCCAACCCAGGTaGCCTACAATAGCAGTGACGTTTGATGGGAGAGAAATGGGTAGT | + |
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Preference number: 1 (lower is better) Translates to: FQLEKLCHGAFIQPR*PTIAVTFDGREMGS Trigger: ACTACCCATTTCTCTCCCATCAAACGTCACTGCTATTGTAGGTCACCTGGGTTGGATGAATGCCCCATGACAAAGCTTCTCAAGCTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| 3UTR CCA 90 bp | TGGGATTTTGTGCTCTATAGATATAAGAGGGTACTGGGAAGGTCTTaGATGATGCTTGGAGAGTACAGGCGTCTTCTCCAGAACAGCCTG | + |
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Preference number: 1 (lower is better) Translates to: WDFVLYRYKRVLGRS*MMLGEYRRLLQNSL Trigger: CAGGCTGTTCTGGAGAAGACGCCTGTACTCTCCAAGCATCATCCAAGACCTTCCCAGTACCCTCTTATATCTATAGAGCACAAAATCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| 3UTR TCA 90 bp | GGGCAGAGGAAACTGGACATCTACCTTTGCCCAAAAGTGTACCTCTaGGAGCCTACTTGTAACTCAAGTGTTTCCTTCAAGTGCTGTGTT | + |
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Preference number: 1 (lower is better) Translates to: GQRKLDIYLCPKVYL*EPTCNSSVSFKCCV Trigger: AACACAGCACTTGAAGGAAACACTTGAGTTACAAGTAGGCTCTCAGAGGTACACTTTTGGGCAAAGGTAGATGTCCAGTTTCCTCTGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| 3UTR TCA 90 bp | ATTTTGTGCTCTATAGATATAAGAGGGTACTGGGAAGGTCTTGGATaGTGCTTGGAGAGTACAGGCGTCTTCTCCAGAACAGCCTGCCTA | + |
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Preference number: 1 (lower is better) Translates to: ILCSIDIRGYWEGLG*CLESTGVFSRTACL Trigger: TAGGCAGGCTGTTCTGGAGAAGACGCCTGTACTCTCCAAGCATCATCCAAGACCTTCCCAGTACCCTCTTATATCTATAGAGCACAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| 3UTR CCA 90 bp | AATCCCAAATTATTTCCAAATAATCCCCTCAAGGGCAGAGGAAACTaGACATCTACCTTTGCCCAAAAGTGTACCTCTGAGAGCCTACTT | + |
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Preference number: 1 (lower is better) Translates to: NPKLFPNNPLKGRGN*TSTFAQKCTSESLL Trigger: AAGTAGGCTCTCAGAGGTACACTTTTGGGCAAAGGTAGATGTCCAGTTTCCTCTGCCCTTGAGGGGATTATTTGGAAATAATTTGGGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| 3UTR TCA 90 bp | GTCAAGACAATTTTCTCAAATCAAGGGAAGCTGACTGACAGCATTTaGGGTGGTTCACAGACATGGCATTTAACTAACACTGACTCGCAA | + |
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Preference number: 1 (lower is better) Translates to: VKTIFSNQGKLTDSI*GGSQTWHLTNTDSQ Trigger: TTGCGAGTCAGTGTTAGTTAAATGCCATGTCTGTGAACCACCTCAAATGCTGTCAGTCAGCTTCCCTTGATTTGAGAAAATTGTCTTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| 3UTR CCA 90 bp | AAGACAAATATTGGTGCTAATATGTCTTTATTACCTCTCCAACACTaGATCTCCCTTTTTATCAAAGACAAGCAAGCAGGCATTAAGCTC | + |
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Preference number: 1 (lower is better) Translates to: KTNIGANMSLLPLQH*ISLFIKDKQAGIKL Trigger: GAGCTTAATGCCTGCTTGCTTGTCTTTGATAAAAAGGGAGATCCAGTGTTGGAGAGGTAATAAAGACATATTAGCACCAATATTTGTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| 3UTR CAA 90 bp | GTGTCCTCCGAGTGGACGCTGCTGCTGAGATGCCTCGTTTGTGCCTaGGCATACCCTGGGGGATACATTTTCCAGCTTGAGAAGCTTTGT | + |
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Preference number: 2 (lower is better) Translates to: VSSEWTLLLRCLVCA*AYPGGYIFQLEKLC Trigger: ACAAAGCTTCTCAAGCTGGAAAATGTATCCCCCAGGGTATGCCAAGGCACAAACGAGGCATCTCAGCAGCAGCGTCCACTCGGAGGACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| 3UTR-3UTR CCA 90 bp | AAGGGAATAGGGATGTGGGGCTTCTCGTCTTGGCTTCTCAGCTCCTGCTGTTTCTGCCTTGGCATACCCTaGGGGATACATTTTCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: KGIGMWGFSSWLLSSCCFCLGIP*GIHFPA Trigger: AGCTGGAAAATGTATCCCCCAGGGTATGCCAAGGCA...GAAACAGCAGGAGCTGAGAAGCCAAGACGAGAAGCCCCACATCCCTATTCCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| 3UTR-3UTR CCA 90 bp | AAAAGTCTGGGTGCCGAGCAGGGAATGCATGAGGTAGGCAAGGGAATAGGGATGAAGGGCAGAGGAAACTaGACATCTACCTTTGCCCAA | + |
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Preference number: 2 (lower is better) Translates to: KSLGAEQGMHEVGKGIGMKGRGN*TSTFAQ Trigger: TTGGGCAAAGGTAGATGTCCAGTTTCCTCTGCCCTT...CATCCCTATTCCCTTGCCTACCTCATGCATTCCCTGCTCGGCACCCAGACTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| 3UTR-3UTR GCA 90 bp | AAAAGTCTGGGTGCCGAGCAGGGAATGCATGAGGTAGGCAAGGGAATAGGGATGTTTGCAGCAGGAGGGTaGTGGTTTTTCACTTATGGA | + |
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Preference number: 2 (lower is better) Translates to: KSLGAEQGMHEVGKGIGMFAAGG*WFFTYG Trigger: TCCATAAGTGAAAAACCAGCACCCTCCTGCTGCAAA...CATCCCTATTCCCTTGCCTACCTCATGCATTCCCTGCTCGGCACCCAGACTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| 3UTR-3UTR CCA 90 bp | GGTAGGCAAGGGAATAGGGATGTGGGGCTTCTCGTCTTGGCTTCTCAGCTCCTGTTACCTCTCCAACACTaGATCTCCCTTTTTATCAAA | + |
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Preference number: 2 (lower is better) Translates to: GRQGNRDVGLLVLASQLLLPLQH*ISLFIK Trigger: TTTGATAAAAAGGGAGATCCAGTGTTGGAGAGGTAA...CAGGAGCTGAGAAGCCAAGACGAGAAGCCCCACATCCCTATTCCCTTGCCTACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| 3UTR-3UTR TCA 90 bp | GAGTACAGGCGTCTTCTCCAGAACAGCCTGCCTAGTCTGGTCAAGACAATTTTCATACATTTTCCAGCTTaGGAAGCTTTGTCATGGGGC | + |
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Preference number: 2 (lower is better) Translates to: EYRRLLQNSLPSLVKTIFIHFPA*EALSWG Trigger: GCCCCATGACAAAGCTTCTCAAGCTGGAAAATGTAT...GAAAATTGTCTTGACCAGACTAGGCAGGCTGTTCTGGAGAAGACGCCTGTACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| 3UTR-3UTR GCA 90 bp | AAGGGAATAGGGATGTGGGGCTTCTCGTCTTGGCTTCTCAGCTCCTGCTGTTTCAGTGTTTCCTTCAAGTaGTGTGTTTTATTTGTCATG | + |
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Preference number: 2 (lower is better) Translates to: KGIGMWGFSSWLLSSCCFSVSFK*CVLFVM Trigger: CATGACAAATAAAACACAGCACTTGAAGGAAACACT...GAAACAGCAGGAGCTGAGAAGCCAAGACGAGAAGCCCCACATCCCTATTCCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| 3UTR-3UTR CCA 90 bp | AAAAGTCTGGGTGCCGAGCAGGGAATGCATGAGGTAGGCAAGGGAATAGGGATGCTGGTTTTTCACTTATaGAGTAATATAAGGCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: KSLGAEQGMHEVGKGIGMLVFHL*SNIRLS Trigger: AGACAGCCTTATATTACTCCATAAGTGAAAAACCAG...CATCCCTATTCCCTTGCCTACCTCATGCATTCCCTGCTCGGCACCCAGACTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| 3UTR-3UTR TCA 90 bp | ACACTGACTCGCAAAGTAAAAACAGCACTTCCCTTTTCGATTCTCTTTCAAACCTTCATCCAACCCAGGTaGCCTACAATAGCAGTGACG | + |
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Preference number: 2 (lower is better) Translates to: TLTRKVKTALPFSILFQTFIQPR*PTIAVT Trigger: CGTCACTGCTATTGTAGGTCACCTGGGTTGGATGAA...GGTTTGAAAGAGAATCGAAAAGGGAAGTGCTGTTTTTACTTTGCGAGTCAGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| 3UTR-3UTR CCA 90 bp | TTCCAAATAATCCCCTCAAGGGCAGAGGAAACTGGACATCTACCTTTGCCCAAAAAACGACCTACTGTGTaGAAAGCTTTAGGCTACATG | + |
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Preference number: 2 (lower is better) Translates to: FQIIPSRAEETGHLPLPKKRPTV*KALGYM Trigger: CATGTAGCCTAAAGCTTTCCACACAGTAGGTCGTTT...TTTGGGCAAAGGTAGATGTCCAGTTTCCTCTGCCCTTGAGGGGATTATTTGGAA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| 3UTR-3UTR TCA 90 bp | CCAAATTATTTCCAAATAATCCCCTCAAGGGCAGAGGAAACTGGACATCTACCTCCAAAAGTGTACCTCTaGGAGCCTACTTGTAACTCA | + |
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Preference number: 2 (lower is better) Translates to: PNYFQIIPSRAEETGHLPPKVYL*EPTCNS Trigger: TGAGTTACAAGTAGGCTCTCAGAGGTACACTTTTGG...AGGTAGATGTCCAGTTTCCTCTGCCCTTGAGGGGATTATTTGGAAATAATTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| 3UTR-3UTR CAA 90 bp | GTAGGCAAGGGAATAGGGATGTGGGGCTTCTCGTCTTGGCTTCTCAGCTCCTGCGCTGAGATGCCTCGTTaGTGCCTTGGCATACCCTGG | + |
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Preference number: 3 (lower is better) Translates to: VGKGIGMWGFSSWLLSSCAEMPR*CLGIPW Trigger: CCAGGGTATGCCAAGGCACAAACGAGGCATCTCAGC...GCAGGAGCTGAGAAGCCAAGACGAGAAGCCCCACATCCCTATTCCCTTGCCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| 3UTR-3UTR CAA 90 bp | GGTAGGCAAGGGAATAGGGATGTGGGGCTTCTCGTCTTGGCTTCTCAGCTCCTGACTGGACATCTACCTTaGCCCAAAAGTGTACCTCTG | + |
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Preference number: 3 (lower is better) Translates to: GRQGNRDVGLLVLASQLLTGHLP*PKSVPL Trigger: CAGAGGTACACTTTTGGGCAAAGGTAGATGTCCAGT...CAGGAGCTGAGAAGCCAAGACGAGAAGCCCCACATCCCTATTCCCTTGCCTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| 3UTR TCA 72 bp | GAGAAGCTTTGTCATGGGGCATTCATCCAACCCAGGTaGCCTACAATAGCAGTGACGTTTGATGGGAGAGAA | + |
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Preference number: 3 (lower is better) Translates to: EKLCHGAFIQPR*PTIAVTFDGRE Trigger: TTCTCTCCCATCAAACGTCACTGCTATTGTAGGTCACCTGGGTTGGATGAATGCCCCATGACAAAGCTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| 3UTR TCA 72 bp | CTCGTCTTGGCTTCTCAGCTCCTGCTGTTTCTTAGTTaGTTCACTGCAGTGTCGTCCTGTGATTCTGGGATT | + |
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Preference number: 3 (lower is better) Translates to: LVLASQLLLFLS*FTAVSSCDSGI Trigger: AATCCCAGAATCACAGGACGACACTGCAGTGAATCAACTAAGAAACAGCAGGAGCTGAGAAGCCAAGACGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| 3UTR CCA 72 bp | AAACAATGCTTTCAATTCTTAACTGTGTCCTCCGAGTaGACGCTGCTGCTGAGATGCCTCGTTTGTGCCTTG | + |
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Preference number: 3 (lower is better) Translates to: KQCFQFLTVSSE*TLLLRCLVCAL Trigger: CAAGGCACAAACGAGGCATCTCAGCAGCAGCGTCCACTCGGAGGACACAGTTAAGAATTGAAAGCATTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| 3UTR CCA 72 bp | GTGCTCTATAGATATAAGAGGGTACTGGGAAGGTCTTaGATGATGCTTGGAGAGTACAGGCGTCTTCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: VLYRYKRVLGRS*MMLGEYRRLLQ Trigger: CTGGAGAAGACGCCTGTACTCTCCAAGCATCATCCAAGACCTTCCCAGTACCCTCTTATATCTATAGAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| 3UTR GCA 72 bp | TGCTTGGAGAGTACAGGCGTCTTCTCCAGAACAGCCTaGCTAGTCTGGTCAAGACAATTTTCTCAAATCAAG | + |
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Preference number: 3 (lower is better) Translates to: CLESTGVFSRTA*LVWSRQFSQIK Trigger: CTTGATTTGAGAAAATTGTCTTGACCAGACTAGGCAGGCTGTTCTGGAGAAGACGCCTGTACTCTCCAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| 3UTR-3UTR CAA 90 bp | TTCCAAATAATCCCCTCAAGGGCAGAGGAAACTGGACATCTACCTTTGCCCAAAGATACATTTTCCAGCTaGAGAAGCTTTGTCATGGGG | + |
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Preference number: 3 (lower is better) Translates to: FQIIPSRAEETGHLPLPKDTFSS*RSFVMG Trigger: CCCCATGACAAAGCTTCTCAAGCTGGAAAATGTATC...TTTGGGCAAAGGTAGATGTCCAGTTTCCTCTGCCCTTGAGGGGATTATTTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| 3UTR TCA 72 bp | TCTATAGATATAAGAGGGTACTGGGAAGGTCTTGGATaGTGCTTGGAGAGTACAGGCGTCTTCTCCAGAACA | + |
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Preference number: 3 (lower is better) Translates to: SIDIRGYWEGLG*CLESTGVFSRT Trigger: TGTTCTGGAGAAGACGCCTGTACTCTCCAAGCATCATCCAAGACCTTCCCAGTACCCTCTTATATCTATAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| 3UTR TCA 72 bp | AAACTGGACATCTACCTTTGCCCAAAAGTGTACCTCTaGGAGCCTACTTGTAACTCAAGTGTTTCCTTCAAG | + |
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Preference number: 3 (lower is better) Translates to: KLDIYLCPKVYL*EPTCNSSVSFK Trigger: CTTGAAGGAAACACTTGAGTTACAAGTAGGCTCTCAGAGGTACACTTTTGGGCAAAGGTAGATGTCCAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| 3UTR TCA 72 bp | GGTCAAGACAATTTTCTCAAATCAAGGGAAGCTGACTaGCAGCATTTGAGGTGGTTCACAGACATGGCATTT | + |
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Preference number: 3 (lower is better) Translates to: GQDNFLKSREAD*QHLRWFTDMAF Trigger: AAATGCCATGTCTGTGAACCACCTCAAATGCTGTCAGTCAGCTTCCCTTGATTTGAGAAAATTGTCTTGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| 3UTR CCA 72 bp | ATTGGTGCTAATATGTCTTTATTACCTCTCCAACACTaGATCTCCCTTTTTATCAAAGACAAGCAAGCAGGC | + |
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Preference number: 3 (lower is better) Translates to: IGANMSLLPLQH*ISLFIKDKQAG Trigger: GCCTGCTTGCTTGTCTTTGATAAAAAGGGAGATCCAGTGTTGGAGAGGTAATAAAGACATATTAGCACCAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| 3UTR CCA 72 bp | TCTGTTTGCAGCAGGAGGGTGCTGGTTTTTCACTTATaGAGTAATATAAGGCTGTCTTTGAAAATAAGTTTA | + |
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Preference number: 3 (lower is better) Translates to: SVCSRRVLVFHL*SNIRLSLKISL Trigger: TAAACTTATTTTCAAAGACAGCCTTATATTACTCCATAAGTGAAAAACCAGCACCCTCCTGCTGCAAACAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR CCA 90 bp | GGCAAGGGAATAGGGATGTGGGGCTTCTCGTCTTGGCTTCTCAGCTCCTGCTGTCAGGGGCATCCTGGTTaGCTTCGGGATCCAGTTCAG | + |
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Preference number: 4 (lower is better) Translates to: GKGIGMWGFSSWLLSSCCQGHPG*LRDPVQ Trigger: CTGAACTGGATCCCGAAGCCAACCAGGATGCCCCTG...ACAGCAGGAGCTGAGAAGCCAAGACGAGAAGCCCCACATCCCTATTCCCTTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR TCA 90 bp | ACAATGCTTTCAATTCTTAACTGTGTCCTCCGAGTGGACGCTGCTGCTGAGATGAGGTCTTCCTCCCTCTaGCCAAGATCCGGGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: TMLSILNCVLRVDAAAEMRSSSL*PRSGAS Trigger: GGAGGCCCCGGATCTTGGTCAGAGGGAGGAAGACCT...CATCTCAGCAGCAGCGTCCACTCGGAGGACACAGTTAAGAATTGAAAGCATTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR CCA 90 bp | GTAGGCAAGGGAATAGGGATGTGGGGCTTCTCGTCTTGGCTTCTCAGCTCCTGCAAGGGAATAGGGATGTaGGGCTTCTCGTCTTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: VGKGIGMWGFSSWLLSSCKGIGM*GFSSWL Trigger: AAGCCAAGACGAGAAGCCCCACATCCCTATTCCCTT...GCAGGAGCTGAGAAGCCAAGACGAGAAGCCCCACATCCCTATTCCCTTGCCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR CCA 90 bp | GGCAAGGGAATAGGGATGTGGGGCTTCTCGTCTTGGCTTCTCAGCTCCTGCTGTACAGGAAGTAGAGAGTaGAAGGGGCAAGATGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: GKGIGMWGFSSWLLSSCCTGSRE*KGQDVP Trigger: TGGAACATCTTGCCCCTTCCACTCTCTACTTCCTGT...ACAGCAGGAGCTGAGAAGCCAAGACGAGAAGCCCCACATCCCTATTCCCTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR CCA 90 bp | GGTAGGCAAGGGAATAGGGATGTGGGGCTTCTCGTCTTGGCTTCTCAGCTCCTGAAGGGCAGAGGAAACTaGACATCTACCTTTGCCCAA | + |
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Preference number: 4 (lower is better) Translates to: GRQGNRDVGLLVLASQLLKGRGN*TSTFAQ Trigger: TTGGGCAAAGGTAGATGTCCAGTTTCCTCTGCCCTT...CAGGAGCTGAGAAGCCAAGACGAGAAGCCCCACATCCCTATTCCCTTGCCTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR TCA 90 bp | AAGGGAATAGGGATGTGGGGCTTCTCGTCTTGGCTTCTCAGCTCCTGCTGTTTCTCAAGGGAAGCTGACTaGCAGCATTTGAGGTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: KGIGMWGFSSWLLSSCCFSREAD*QHLRWF Trigger: GAACCACCTCAAATGCTGTCAGTCAGCTTCCCTTGA...GAAACAGCAGGAGCTGAGAAGCCAAGACGAGAAGCCCCACATCCCTATTCCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR GCA 90 bp | GAGTACAGGCGTCTTCTCCAGAACAGCCTGCCTAGTCTGGTCAAGACAATTTTCGTCTGGTTAGAGCTCTaGCCTCCGAGGTGCAGTAGA | + |
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Preference number: 4 (lower is better) Translates to: EYRRLLQNSLPSLVKTIFVWLEL*PPRCSR Trigger: TCTACTGCACCTCGGAGGGCAGAGCTCTAACCAGAC...GAAAATTGTCTTGACCAGACTAGGCAGGCTGTTCTGGAGAAGACGCCTGTACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR CCA 90 bp | AAAAGTCTGGGTGCCGAGCAGGGAATGCATGAGGTAGGCAAGGGAATAGGGATGTGCCTTGGCATACCCTaGGGGATACATTTTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: KSLGAEQGMHEVGKGIGMCLGIP*GIHFPA Trigger: AGCTGGAAAATGTATCCCCCAGGGTATGCCAAGGCA...CATCCCTATTCCCTTGCCTACCTCATGCATTCCCTGCTCGGCACCCAGACTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR CCA 90 bp | AGTAGCAGGAATGGGGGCAAAAGTCTGGGTGCCGAGCAGGGAATGCATGAGGTAGTACTGGGAAGGTCTTaGATGATGCTTGGAGAGTAC | + |
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Preference number: 4 (lower is better) Translates to: SSRNGGKSLGAEQGMHEVVLGRS*MMLGEY Trigger: GTACTCTCCAAGCATCATCCAAGACCTTCCCAGTAC...TACCTCATGCATTCCCTGCTCGGCACCCAGACTTTTGCCCCCATTCCTGCTACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR TCA 90 bp | GTGGTATGTGATTGCCTAAAAGTTGGAAAACACTCCAGAGCAAGGGTTCTCACACCAGCACCACGGAGCTaGTCGTTCGAGGCACCTTCT | + |
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Preference number: 4 (lower is better) Translates to: VVCDCLKVGKHSRARVLTPAPRS*SFEAPS Trigger: AGAAGGTGCCTCGAACGATCAGCTCCGTGGTGCTGG...TGTGAGAACCCTTGCTCTGGAGTGTTTTCCAACTTTTAGGCAATCACATACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR CCA 90 bp | ACAATGCTTTCAATTCTTAACTGTGTCCTCCGAGTGGACGCTGCTGCTGAGATGTCTGGAGTTCTTGCGTaGCATTTCCACCAGGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: TMLSILNCVLRVDAAAEMSGVLA*HFHQGE Trigger: CTCCCCCTGGTGGAAATGCCACGCAAGAACTCCAGA...CATCTCAGCAGCAGCGTCCACTCGGAGGACACAGTTAAGAATTGAAAGCATTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR TCA 90 bp | TTTCCAAATAATCCCCTCAAGGGCAGAGGAAACTGGACATCTACCTTTGCCCAACGAGCAGGGAATGCATaGGGTAGGCAAGGGAATAGG | + |
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Preference number: 4 (lower is better) Translates to: FPNNPLKGRGNWTSTFAQRAGNA*GRQGNR Trigger: CCTATTCCCTTGCCTACCTCATGCATTCCCTGCTCG...TTGGGCAAAGGTAGATGTCCAGTTTCCTCTGCCCTTGAGGGGATTATTTGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR CCA 90 bp | ACATCTACCTTTGCCCAAAAGTGTACCTCTGAGAGCCTACTTGTAACTCAAGTGTGCTTGCAGCGTGTCTaGTTAGAGCTCTGCCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: TSTFAQKCTSESLLVTQVCLQRV*LELCPP Trigger: CGGAGGGCAGAGCTCTAACCAGACACGCTGCAAGCA...CACTTGAGTTACAAGTAGGCTCTCAGAGGTACACTTTTGGGCAAAGGTAGATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR CCA 90 bp | GTGGTATGTGATTGCCTAAAAGTTGGAAAACACTCCAGAGCAAGGGTTCTCACAGACCATCGCGGCTCATaGCAACGGACACACCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VVCDCLKVGKHSRARVLTDHRGS*QRTHQN Trigger: GTTCTGGTGTGTCCGTTGCCATGAGCCGCGATGGTC...TGTGAGAACCCTTGCTCTGGAGTGTTTTCCAACTTTTAGGCAATCACATACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR TCA 90 bp | GTGGTATGTGATTGCCTAAAAGTTGGAAAACACTCCAGAGCAAGGGTTCTCACATCTCATTCCCCACAATaGGGCAGTATAGCGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VVCDCLKVGKHSRARVLTSHSPQ*GSIAGG Trigger: CCCACCCGCTATACTGCCTCATTGTGGGGAATGAGA...TGTGAGAACCCTTGCTCTGGAGTGTTTTCCAACTTTTAGGCAATCACATACCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR GCA 90 bp | GAGTACAGGCGTCTTCTCCAGAACAGCCTGCCTAGTCTGGTCAAGACAATTTTCTTCTCCAGAACAGCCTaGCTAGTCTGGTCAAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: EYRRLLQNSLPSLVKTIFFSRTA*LVWSRQ Trigger: TTGTCTTGACCAGACTAGGCAGGCTGTTCTGGAGAA...GAAAATTGTCTTGACCAGACTAGGCAGGCTGTTCTGGAGAAGACGCCTGTACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR CCA 90 bp | TTATCAAAGACAAGCAAGCAGGCATTAAGCTCAGAATCACTGGCAGGCAATAGAAGCAGGCCAGCAGAATaGCCATCAGCACCCAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSKTSKQALSSESLAGNRSRPAE*PSAPKG Trigger: CCCTTTGGGTGCTGATGGCCATTCTGCTGGCCTGCT...TCTATTGCCTGCCAGTGATTCTGAGCTTAATGCCTGCTTGCTTGTCTTTGATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR CCA 90 bp | ACCTTTGCCCAAAAGTGTACCTCTGAGAGCCTACTTGTAACTCAAGTGTTTCCTCGGACACACCAGAACTaGAGGCAGATGAAGGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TFAQKCTSESLLVTQVFPRTHQN*RQMKAK Trigger: CTTGGCCTTCATCTGCCTCCAGTTCTGGTGTGTCCG...AGGAAACACTTGAGTTACAAGTAGGCTCTCAGAGGTACACTTTTGGGCAAAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR GCA 90 bp | TTTCCAAATAATCCCCTCAAGGGCAGAGGAAACTGGACATCTACCTTTGCCCAACTCTGCCCTCCGAGGTaGAGTAGATTAAAGCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FPNNPLKGRGNWTSTFAQLCPPR*SRLKLR Trigger: TCTCAGCTTTAATCTACTGCACCTCGGAGGGCAGAG...TTGGGCAAAGGTAGATGTCCAGTTTCCTCTGCCCTTGAGGGGATTATTTGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR CCA 90 bp | GTTTTCATGATGTTTATTCTTATGTCTCTTCCCTTCTGTTTGCAGCAGGAGGGTATGGGGGCAAAAGTCTaGGTGCCGAGCAGGGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: VFMMFILMSLPFCLQQEGMGAKV*VPSREC Trigger: GCATTCCCTGCTCGGCACCCAGACTTTTGCCCCCAT...ACCCTCCTGCTGCAAACAGAAGGGAAGAGACATAAGAATAAACATCATGAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR TCA 90 bp | ACCTTTGCCCAAAAGTGTACCTCTGAGAGCCTACTTGTAACTCAAGTGTTTCCTCAGCCTTCTTACAGCTaGTGCACAGGAAGTAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TFAQKCTSESLLVTQVFPQPSYS*CTGSRE Trigger: CTCTCTACTTCCTGTGCATCAGCTGTAAGAAGGCTG...AGGAAACACTTGAGTTACAAGTAGGCTCTCAGAGGTACACTTTTGGGCAAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR TCA 90 bp | TTTGTACAAACGACCTACTGTGTGGAAAGCTTTAGGCTACATGATGCGGGCGCTCCAAAAGTGTACCTCTaGGAGCCTACTTGTAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: FVQTTYCVESFRLHDAGAPKVYL*EPTCNS Trigger: TGAGTTACAAGTAGGCTCTCAGAGGTACACTTTTGG...AGCGCCCGCATCATGTAGCCTAAAGCTTTCCACACAGTAGGTCGTTTGTACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR TCA 90 bp | ACCTTTGCCCAAAAGTGTACCTCTGAGAGCCTACTTGTAACTCAAGTGTTTCCTCTGACTGACAGCATTTaGGGTGGTTCACAGACATGG | + |
|
Preference number: 4 (lower is better) Translates to: TFAQKCTSESLLVTQVFPLTDSI*GGSQTW Trigger: CCATGTCTGTGAACCACCTCAAATGCTGTCAGTCAG...AGGAAACACTTGAGTTACAAGTAGGCTCTCAGAGGTACACTTTTGGGCAAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR TCA 90 bp | TTCCAAATAATCCCCTCAAGGGCAGAGGAAACTGGACATCTACCTTTGCCCAAACAAATCAAGGGAAGCTaGCTGACAGCATTTGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FQIIPSRAEETGHLPLPKQIKGS*LTAFEV Trigger: CACCTCAAATGCTGTCAGTCAGCTTCCCTTGATTTG...TTTGGGCAAAGGTAGATGTCCAGTTTCCTCTGCCCTTGAGGGGATTATTTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR GCA 90 bp | TTATCAAAGACAAGCAAGCAGGCATTAAGCTCAGAATCACTGGCAGGCAATAGAGGGTGTGGAACATGGTaGAGTAGTGCCTGTAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSKTSKQALSSESLAGNRGCGTW*SSACKG Trigger: TCCCTTACAGGCACTACTGCACCATGTTCCACACCC...TCTATTGCCTGCCAGTGATTCTGAGCTTAATGCCTGCTTGCTTGTCTTTGATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR GCA 90 bp | CCAAATTATTTCCAAATAATCCCCTCAAGGGCAGAGGAAACTGGACATCTACCTCTCTTCCCTTCTGTTTaGAGCAGGAGGGTGCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PNYFQIIPSRAEETGHLPLFPSV*SRRVLV Trigger: AACCAGCACCCTCCTGCTGCAAACAGAAGGGAAGAG...AGGTAGATGTCCAGTTTCCTCTGCCCTTGAGGGGATTATTTGGAAATAATTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
||
| CDS-3UTR CCA 90 bp | GTTTTCATGATGTTTATTCTTATGTCTCTTCCCTTCTGTTTGCAGCAGGAGGGTACCCAAAGGGAGATCTaGGGGTCTACCAGGGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VFMMFILMSLPFCLQQEGTQREI*GSTREL Trigger: AAGCTCCCTGGTAGACCCCCAGATCTCCCTTTGGGT...ACCCTCCTGCTGCAAACAGAAGGGAAGAGACATAAGAATAAACATCATGAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR TCA 90 bp | ACACTGACTCGCAAAGTAAAAACAGCACTTCCCTTTTCGATTCTCTTTCAAACCTGTTCATCCCGATTCTaGTGCTTGCAGCGTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLTRKVKTALPFSILFQTCSSRF*CLQRVW Trigger: CCAGACACGCTGCAAGCATCAGAATCGGGATGAACA...GGTTTGAAAGAGAATCGAAAAGGGAAGTGCTGTTTTTACTTTGCGAGTCAGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR CCA 90 bp | AACAGCACTTCCCTTTTCGATTCTCTTTCAAACCTTATGCTATATCAAGGAGAAGCATCAGGGGCATCCTaGTTGGCTTCGGGATCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NSTSLFDSLSNLMLYQGEASGAS*LASGSS Trigger: ACTGGATCCCGAAGCCAACCAGGATGCCCCTGATGC...TTCTCCTTGATATAGCATAAGGTTTGAAAGAGAATCGAAAAGGGAAGTGCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR CCA 90 bp | TTTGTACAAACGACCTACTGTGTGGAAAGCTTTAGGCTACATGATGCGGGCGCTAAACGACCTACTGTGTaGAAAGCTTTAGGCTACATG | + |
|
Preference number: 4 (lower is better) Translates to: FVQTTYCVESFRLHDAGAKRPTV*KALGYM Trigger: CATGTAGCCTAAAGCTTTCCACACAGTAGGTCGTTT...AGCGCCCGCATCATGTAGCCTAAAGCTTTCCACACAGTAGGTCGTTTGTACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR TCA 90 bp | AAATTATTTCCAAATAATCCCCTCAAGGGCAGAGGAAACTGGACATCTACCTTTTGGGAAGGTCTTGGATaGTGCTTGGAGAGTACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KLFPNNPLKGRGNWTSTFWEGLG*CLESTG Trigger: GCCTGTACTCTCCAAGCATCATCCAAGACCTTCCCA...AAAGGTAGATGTCCAGTTTCCTCTGCCCTTGAGGGGATTATTTGGAAATAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR GCA 90 bp | GAGTACAGGCGTCTTCTCCAGAACAGCCTGCCTAGTCTGGTCAAGACAATTTTCGATTCTGGGATTTTGTaGTCTATAGATATAAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: EYRRLLQNSLPSLVKTIFDSGIL*SIDIRG Trigger: CCCTCTTATATCTATAGAGCACAAAATCCCAGAATC...GAAAATTGTCTTGACCAGACTAGGCAGGCTGTTCTGGAGAAGACGCCTGTACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR CCA 90 bp | GAGTACAGGCGTCTTCTCCAGAACAGCCTGCCTAGTCTGGTCAAGACAATTTTCTTACCTCTCCAACACTaGATCTCCCTTTTTATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: EYRRLLQNSLPSLVKTIFLPLQH*ISLFIK Trigger: TTTGATAAAAAGGGAGATCCAGTGTTGGAGAGGTAA...GAAAATTGTCTTGACCAGACTAGGCAGGCTGTTCTGGAGAAGACGCCTGTACTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR CCA 90 bp | CCAAATTATTTCCAAATAATCCCCTCAAGGGCAGAGGAAACTGGACATCTACCTGTCTTGGATGATGCTTaGAGAGTACAGGCGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PNYFQIIPSRAEETGHLPVLDDA*RVQASS Trigger: AGAAGACGCCTGTACTCTCCAAGCATCATCCAAGAC...AGGTAGATGTCCAGTTTCCTCTGCCCTTGAGGGGATTATTTGGAAATAATTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR GCA 90 bp | TTATCAAAGACAAGCAAGCAGGCATTAAGCTCAGAATCACTGGCAGGCAATAGATTTGCAGCAGGAGGGTaGTGGTTTTTCACTTATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSKTSKQALSSESLAGNRFAAGG*WFFTYG Trigger: TCCATAAGTGAAAAACCAGCACCCTCCTGCTGCAAA...TCTATTGCCTGCCAGTGATTCTGAGCTTAATGCCTGCTTGCTTGTCTTTGATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR GCA 90 bp | GAGTACAGGCGTCTTCTCCAGAACAGCCTGCCTAGTCTGGTCAAGACAATTTTCCTCTTTCAAACCTTATaGTATATCAAGGAGAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: EYRRLLQNSLPSLVKTIFLFQTL*YIKEKD Trigger: GTCTTTCTCCTTGATATAGCATAAGGTTTGAAAGAG...GAAAATTGTCTTGACCAGACTAGGCAGGCTGTTCTGGAGAAGACGCCTGTACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR CCA 90 bp | ACAATGCTTTCAATTCTTAACTGTGTCCTCCGAGTGGACGCTGCTGCTGAGATGTTGATGGGAGAGAAATaGGTAGTCTATAGACACATT | + |
|
Preference number: 4 (lower is better) Translates to: TMLSILNCVLRVDAAAEMLMGEK*VVYRHI Trigger: AATGTGTCTATAGACTACCCATTTCTCTCCCATCAA...CATCTCAGCAGCAGCGTCCACTCGGAGGACACAGTTAAGAATTGAAAGCATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR TCA 90 bp | AACAGCACTTCCCTTTTCGATTCTCTTTCAAACCTTATGCTATATCAAGGAGAATTCATCCAACCCAGGTaGCCTACAATAGCAGTGACG | + |
|
Preference number: 4 (lower is better) Translates to: NSTSLFDSLSNLMLYQGEFIQPR*PTIAVT Trigger: CGTCACTGCTATTGTAGGTCACCTGGGTTGGATGAA...TTCTCCTTGATATAGCATAAGGTTTGAAAGAGAATCGAAAAGGGAAGTGCTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR TCA 90 bp | GTTTTCATGATGTTTATTCTTATGTCTCTTCCCTTCTGTTTGCAGCAGGAGGGTATACATTTTCCAGCTTaGGAAGCTTTGTCATGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VFMMFILMSLPFCLQQEGIHFPA*EALSWG Trigger: GCCCCATGACAAAGCTTCTCAAGCTGGAAAATGTAT...ACCCTCCTGCTGCAAACAGAAGGGAAGAGACATAAGAATAAACATCATGAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR TCA 90 bp | TTAATGTTAAAACAATGCTTTCAATTCTTAACTGTGTCCTCCGAGTGGACGCTGCTGCTGTTTCTTAGTTaGTTCACTGCAGTGTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LMLKQCFQFLTVSSEWTLLLFLS*FTAVSS Trigger: GGACGACACTGCAGTGAATCAACTAAGAAACAGCAG...CAGCGTCCACTCGGAGGACACAGTTAAGAATTGAAAGCATTGTTTTAACATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR GCA 90 bp | AACAGCACTTCCCTTTTCGATTCTCTTTCAAACCTTATGCTATATCAAGGAGAAGATAGCCAGAGAAGATaGTGTTCCAGTTGGGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NSTSLFDSLSNLMLYQGEDSQRR*CSSWAC Trigger: ACAGGCCCAACTGGAACAGCATCTTCTCTGGCTATC...TTCTCCTTGATATAGCATAAGGTTTGAAAGAGAATCGAAAAGGGAAGTGCTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR CCA 90 bp | AACAGCACTTCCCTTTTCGATTCTCTTTCAAACCTTATGCTATATCAAGGAGAATTAAAGCTGAGAGAATaGGGCCTTCTCCCTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NSTSLFDSLSNLMLYQGELKLRE*GLLPPL Trigger: CAGAGGAGGGAGAAGGCCCCATTCTCTCAGCTTTAA...TTCTCCTTGATATAGCATAAGGTTTGAAAGAGAATCGAAAAGGGAAGTGCTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR GCA 90 bp | CCAAATTATTTCCAAATAATCCCCTCAAGGGCAGAGGAAACTGGACATCTACCTAGTGTTTCCTTCAAGTaGTGTGTTTTATTTGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: PNYFQIIPSRAEETGHLPSVSFK*CVLFVM Trigger: CATGACAAATAAAACACAGCACTTGAAGGAAACACT...AGGTAGATGTCCAGTTTCCTCTGCCCTTGAGGGGATTATTTGGAAATAATTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR CCA 90 bp | AACAGCACTTCCCTTTTCGATTCTCTTTCAAACCTTATGCTATATCAAGGAGAACTGGTTTTTCACTTATaGAGTAATATAAGGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NSTSLFDSLSNLMLYQGELVFHL*SNIRLS Trigger: AGACAGCCTTATATTACTCCATAAGTGAAAAACCAG...TTCTCCTTGATATAGCATAAGGTTTGAAAGAGAATCGAAAAGGGAAGTGCTGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS CCA 90 bp | GTGAAGCAGGCCAGCAGAATGGCCATCAGCACCCAAAGGGAGATCTaGGGGTCTACCAGGGAGCTTCCAGGAGCCAGCGGACTCTTATCC | + |
|
Preference number: 5 (lower is better) Translates to: VKQASRMAISTQREI*GSTRELPGASGLLS Trigger: GGATAAGAGTCCGCTGGCTCCTGGAAGCTCCCTGGTAGACCCCCAGATCTCCCTTTGGGTGCTGATGGCCATTCTGCTGGCCTGCTTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000312349.5 ENST00000520782.1 |
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| CDS-3UTR CAA 90 bp | GGTAGGCAAGGGAATAGGGATGTGGGGCTTCTCGTCTTGGCTTCTCAGCTCCTGTCAGGGGCATCCTGGTaGGCTTCGGGATCCAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GRQGNRDVGLLVLASQLLSGASW*ASGSSS Trigger: TGAACTGGATCCCGAAGCCAACCAGGATGCCCCTGA...CAGGAGCTGAGAAGCCAAGACGAGAAGCCCCACATCCCTATTCCCTTGCCTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR CAA 90 bp | GGCAAGGGAATAGGGATGTGGGGCTTCTCGTCTTGGCTTCTCAGCTCCTGCTGTGCTGAGATGCCTCGTTaGTGCCTTGGCATACCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GKGIGMWGFSSWLLSSCCAEMPR*CLGIPW Trigger: CCAGGGTATGCCAAGGCACAAACGAGGCATCTCAGC...ACAGCAGGAGCTGAGAAGCCAAGACGAGAAGCCCCACATCCCTATTCCCTTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS TCA 90 bp | GGAAGTAGAGAGTGGAAGGGGCAAGATGTTCCAGCACCACGGAGCTaGTCGTTCGAGGCACCTTCTCCTCGTGGTGGAAGCTGTAGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: GSREWKGQDVPAPRS*SFEAPSPRGGSCSE Trigger: TTCGCTACAGCTTCCACCACGAGGAGAAGGTGCCTCGAACGATCAGCTCCGTGGTGCTGGAACATCTTGCCCCTTCCACTCTCTACTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000312349.5 ENST00000520782.1 |
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| CDS-3UTR CAA 90 bp | GTAGGCAAGGGAATAGGGATGTGGGGCTTCTCGTCTTGGCTTCTCAGCTCCTGCCCATCTCTGGAGTTCTaGCGTGGCATTTCCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VGKGIGMWGFSSWLLSSCPSLEF*RGISTR Trigger: CCTGGTGGAAATGCCACGCAAGAACTCCAGAGATGG...GCAGGAGCTGAGAAGCCAAGACGAGAAGCCCCACATCCCTATTCCCTTGCCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR CAA 90 bp | GGCAAGGGAATAGGGATGTGGGGCTTCTCGTCTTGGCTTCTCAGCTCCTGCTGTTCTGGGCTTTCCGTGTaGTTTCTCTCAACACTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GKGIGMWGFSSWLLSSCCSGLSV*FLSTLS Trigger: ACTCAGTGTTGAGAGAAACAACACGGAAAGCCCAGA...ACAGCAGGAGCTGAGAAGCCAAGACGAGAAGCCCCACATCCCTATTCCCTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS TCA 90 bp | ACATGGTGCAGTAGTGCCTGTAAGGGAAGGCAGCCTTCTTACAGCTaGTGCACAGGAAGTAGAGAGTGGAAGGGGCAAGATGTTCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TWCSSACKGRQPSYS*CTGSREWKGQDVPA Trigger: TGCTGGAACATCTTGCCCCTTCCACTCTCTACTTCCTGTGCATCAGCTGTAAGAAGGCTGCCTTCCCTTACAGGCACTACTGCACCATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000312349.5 ENST00000520782.1 |
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| CDS-3UTR CAA 90 bp | GGCAAGGGAATAGGGATGTGGGGCTTCTCGTCTTGGCTTCTCAGCTCCTGCTGTAAGATGCTGTTCCAGTaGGGCCTGTACATAATATGG | + |
|
Preference number: 5 (lower is better) Translates to: GKGIGMWGFSSWLLSSCCKMLFQ*GLYIIW Trigger: CCATATTATGTACAGGCCCAACTGGAACAGCATCTT...ACAGCAGGAGCTGAGAAGCCAAGACGAGAAGCCCCACATCCCTATTCCCTTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR CAA 90 bp | ACAATGCTTTCAATTCTTAACTGTGTCCTCCGAGTGGACGCTGCTGCTGAGATGACTGGACATCTACCTTaGCCCAAAAGTGTACCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TMLSILNCVLRVDAAAEMTGHLP*PKSVPL Trigger: CAGAGGTACACTTTTGGGCAAAGGTAGATGTCCAGT...CATCTCAGCAGCAGCGTCCACTCGGAGGACACAGTTAAGAATTGAAAGCATTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR CAA 90 bp | TTAATGTTAAAACAATGCTTTCAATTCTTAACTGTGTCCTCCGAGTGGACGCTGCATCTCACCAACCCATaGGCCTCCTCCATGTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LMLKQCFQFLTVSSEWTLHLTNP*ASSMWP Trigger: TGGCCACATGGAGGAGGCCAATGGGTTGGTGAGATG...CAGCGTCCACTCGGAGGACACAGTTAAGAATTGAAAGCATTGTTTTAACATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR CAA 90 bp | TTAATGTTAAAACAATGCTTTCAATTCTTAACTGTGTCCTCCGAGTGGACGCTGTCTCTTCCCTTCTGTTaGCAGCAGGAGGGTGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LMLKQCFQFLTVSSEWTLSLPFC*QQEGAG Trigger: ACCAGCACCCTCCTGCTGCAAACAGAAGGGAAGAGA...CAGCGTCCACTCGGAGGACACAGTTAAGAATTGAAAGCATTGTTTTAACATTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS-3UTR CAA 90 bp | GTGGTATGTGATTGCCTAAAAGTTGGAAAACACTCCAGAGCAAGGGTTCTCACAGATACATTTTCCAGCTaGAGAAGCTTTGTCATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VVCDCLKVGKHSRARVLTDTFSS*RSFVMG Trigger: CCCCATGACAAAGCTTCTCAAGCTGGAAAATGTATC...TGTGAGAACCCTTGCTCTGGAGTGTTTTCCAACTTTTAGGCAATCACATACCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000312349.5 |
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| CDS TCA 90 bp | CTATTTTTAACTATTCATTTGCCCGGCCCTTCTCCAAGCAGAGTGTaGAAAGAAGCCATTTCCATTTCCAAGAAGAGCCATCTATATGTC | + |
|
Preference number: 5 (lower is better) Translates to: LFLTIHLPGPSPSRV*KEAISISKKSHLYV Trigger: GACATATAGATGGCTCTTCTTGGAAATGGAAATGGCTTCTTTTCACACTCTGCTTGGAGAAGGGCCGGGCAAATGAATAGTTAAAAATAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000520782.1 |
||
| CDS CCA 72 bp | GCCAGCAGAATGGCCATCAGCACCCAAAGGGAGATCTaGGGGTCTACCAGGGAGCTTCCAGGAGCCAGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: ASRMAISTQREI*GSTRELPGASG Trigger: TCCGCTGGCTCCTGGAAGCTCCCTGGTAGACCCCCAGATCTCCCTTTGGGTGCTGATGGCCATTCTGCTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000312349.5 ENST00000520782.1 |
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| CDS TCA 72 bp | GAGTGGAAGGGGCAAGATGTTCCAGCACCACGGAGCTaGTCGTTCGAGGCACCTTCTCCTCGTGGTGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: EWKGQDVPAPRS*SFEAPSPRGGS Trigger: GCTTCCACCACGAGGAGAAGGTGCCTCGAACGATCAGCTCCGTGGTGCTGGAACATCTTGCCCCTTCCACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000312349.5 ENST00000520782.1 |
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| CDS GCA 72 bp | GAGCCAGCGGACTCTTATCCAGGGTGTGGAACATGGTaGAGTAGTGCCTGTAAGGGAAGGCAGCCTTCTTAC | + |
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Preference number: 6 (lower is better) Translates to: EPADSYPGCGTW*SSACKGRQPSY Trigger: GTAAGAAGGCTGCCTTCCCTTACAGGCACTACTGCACCATGTTCCACACCCTGGATAAGAGTCCGCTGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000312349.5 ENST00000520782.1 |
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| CDS TCA 72 bp | AGTAGTGCCTGTAAGGGAAGGCAGCCTTCTTACAGCTaGTGCACAGGAAGTAGAGAGTGGAAGGGGCAAGAT | + |
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Preference number: 6 (lower is better) Translates to: SSACKGRQPSYS*CTGSREWKGQD Trigger: ATCTTGCCCCTTCCACTCTCTACTTCCTGTGCATCAGCTGTAAGAAGGCTGCCTTCCCTTACAGGCACTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000312349.5 ENST00000520782.1 |
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