Pregenerated sensors for FNDC8 (Homo sapiens)
Ensembl gene IDs: ENSG00000073598Ensembl transcript IDs: ENST00000158009.6
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GGGCAGTGGCTGAGCCTGGCATGGCCTGGCCTGAGATGCCTCCAGGTGAATGGGAGCCCAGGGGTGGGGTaGCCATACCACTCTGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: GQWLSLAWPGLRCLQVNGSPGVG*PYHSAR Trigger: TCTGGCAGAGTGGTATGGGCACCCCACCCCTGGGCT...CCCATTCACCTGGAGGCATCTCAGGCCAGGCCATGCCAGGCTCAGCCACTGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| 3UTR-3UTR TCA 90 bp | CTCTGCCAGACCCCGGGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTGAAGCTGAAAGTAGGTaGGGGGTGTCCTGGGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: LCQTPGPQGAGGMVGLMAEAESR*GVSWGP Trigger: AGGGCCCCAGGACACCCCTCACCTACTTTCAGCTTC...AGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCCGGGGTCTGGCAGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| 3UTR-3UTR CCA 90 bp | GGGCAGTGGCTGAGCCTGGCATGGCCTGGCCTGAGATGCCTCCAGGTGAATGGGGGGCCCGCAGGGTGCTaGTGGTATGGTAGGTCTCAT | + |
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Preference number: 2 (lower is better) Translates to: GQWLSLAWPGLRCLQVNGGPAGC*WYGRSH Trigger: ATGAGACCTACCATACCACCAGCACCCTGCGGGCCC...CCCATTCACCTGGAGGCATCTCAGGCCAGGCCATGCCAGGCTCAGCCACTGCCC 64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| 3UTR-3UTR GCA 90 bp | TCTTTAATGAGGGACCTAGACCCAGCCCAGATTTGGAGGAGGAGGGAGTCTAGCTGGCCTGGCCTGAGATaGCTCCAGGTGAATGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: SLMRDLDPAQIWRRRESSWPGLR*LQVNGA Trigger: GGCCCCATTCACCTGGAGGCATCTCAGGCCAGGCCA...GCTAGACTCCCTCCTCCTCCAAATCTGGGCTGGGTCTAGGTCCCTCATTAAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| 3UTR-3UTR CCA 90 bp | ACCTGCAGTTCTTTAATGAGGGACCTAGACCCAGCCCAGATTTGGAGGAGGAGGTGGCTGAGCCTGGCATaGCCTGGCCTGAGATGCCTC | + |
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Preference number: 2 (lower is better) Translates to: TCSSLMRDLDPAQIWRRRWLSLA*PGLRCL Trigger: GAGGCATCTCAGGCCAGGCCATGCCAGGCTCAGCCA...CCTCCTCCTCCAAATCTGGGCTGGGTCTAGGTCCCTCATTAAAGAACTGCAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| 3UTR-3UTR TCA 90 bp | GACCTGCAGTTCTTTAATGAGGGACCTAGACCCAGCCCAGATTTGGAGGAGGAGCATGGCTCTGGTTTCTaGGGGCCTGGGGTTGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: DLQFFNEGPRPSPDLEEEHGSGF*GPGVEA Trigger: AGCTTCAACCCCAGGCCCTCAGAAACCAGAGCCATG...CTCCTCCTCCAAATCTGGGCTGGGTCTAGGTCCCTCATTAAAGAACTGCAGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| 3UTR-3UTR CCA 90 bp | TGGATGACCTGCAGTTCTTTAATGAGGGACCTAGACCCAGCCCAGATTTGGAGGCCCGCAGGGTGCTGGTaGTATGGTAGGTCTCATGGC | + |
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Preference number: 2 (lower is better) Translates to: WMTCSSLMRDLDPAQIWRPAGCW*YGRSHG Trigger: GCCATGAGACCTACCATACCACCAGCACCCTGCGGG...CCTCCAAATCTGGGCTGGGTCTAGGTCCCTCATTAAAGAACTGCAGGTCATCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| 3UTR GCA 72 bp | GCCCATACCACTCTGCCAGACCCCGGGCCCGCAGGGTaGTGGTGGTATGGTAGGTCTCATGGCTCTGGTTTC | + |
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Preference number: 3 (lower is better) Translates to: AHTTLPDPGPAG*WWYGRSHGSGF Trigger: GAAACCAGAGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCCGGGGTCTGGCAGAGTGGTATGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| 3UTR-3UTR CAA 90 bp | TGGATGACCTGCAGTTCTTTAATGAGGGACCTAGACCCAGCCCAGATTTGGAGGTCTGAGGGCCTGGGGTaGAAGCTGAAAGTAGGTGAG | + |
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Preference number: 3 (lower is better) Translates to: WMTCSSLMRDLDPAQIWRSEGLG*KLKVGE Trigger: CTCACCTACTTTCAGCTTCAACCCCAGGCCCTCAGA...CCTCCAAATCTGGGCTGGGTCTAGGTCCCTCATTAAAGAACTGCAGGTCATCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR GCA 90 bp | CTGCCAGACCCCGGGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTCCCGGGCCCGCAGGGTaGTGGTGGTATGGTAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: LPDPGPAGCWWYGRSHGSPGPAG*WWYGRS Trigger: AGACCTACCATACCACCAGCACCCTGCGGGCCCGGG...AGAGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCCGGGGTCTGGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CCA 90 bp | TGTGGGCAGTGGCTGAGCCTGGCATGGCCTGGCCTGAGATGCCTCCAGGTGAATGCCCCAGCCCAGGGGTaGGGTGCCCATACCACTCTG | + |
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Preference number: 4 (lower is better) Translates to: CGQWLSLAWPGLRCLQVNAPAQG*GAHTTL Trigger: CAGAGTGGTATGGGCACCCCACCCCTGGGCTGGGGC...ATTCACCTGGAGGCATCTCAGGCCAGGCCATGCCAGGCTCAGCCACTGCCCACA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CCA 90 bp | TGCCAGACCCCGGGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGAGCAGCTGTGGGCAGTaGCTGAGCCTGGCATGGCCT | + |
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Preference number: 4 (lower is better) Translates to: CQTPGPQGAGGMVGLMALSSCGQ*LSLAWP Trigger: AGGCCATGCCAGGCTCAGCCACTGCCCACAGCTGCT...CAGAGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCCGGGGTCTGGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR TCA 90 bp | CTCTGCCAGACCCCGGGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCGGTGTGCTCAAAGATaGAGGGGGTGTCCGGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: LCQTPGPQGAGGMVGLMARCAQR*RGCPAG Trigger: ACCTGCCGGACACCCCCTTCATCTTTGAGCACACCG...AGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCCGGGGTCTGGCAGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR TCA 90 bp | CTGCCAGACCCCGGGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGAAGCTGAAAGTAGGTaGGGGGTGTCCTGGGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: LPDPGPAGCWWYGRSHGSEAESR*GVSWGP Trigger: AGGGCCCCAGGACACCCCTCACCTACTTTCAGCTTC...AGAGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCCGGGGTCTGGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR GCA 90 bp | CAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGTTTCTGAGGGCCTGGGGGTGCCCATACCACTCTaGCAGACCCCGGGCCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: QGAGGMVGLMALVSEGLGVPIPL*QTPGPQ Trigger: CTGCGGGCCCGGGGTCTGGCAGAGTGGTATGGGCAC...CCCCAGGCCCTCAGAAACCAGAGCCATGAGACCTACCATACCACCAGCACCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CCA 90 bp | CTGCCAGACCCCGGGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTCCCGCAGGGTGCTGGTaGTATGGTAGGTCTCATGGC | + |
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Preference number: 4 (lower is better) Translates to: LPDPGPAGCWWYGRSHGSPAGCW*YGRSHG Trigger: GCCATGAGACCTACCATACCACCAGCACCCTGCGGG...AGAGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCCGGGGTCTGGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR TCA 90 bp | CAGACCCCGGGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGTTTCCCCATCTCCCACTTaGTGGAGTGCCTCTGATGCC | + |
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Preference number: 4 (lower is better) Translates to: QTPGPQGAGGMVGLMALVSPSPT*WSASDA Trigger: GGCATCAGAGGCACTCCATCAAGTGGGAGATGGGGA...AACCAGAGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCCGGGGTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR TCA 90 bp | CTGCCAGACCCCGGGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTATCAGAGCTGCAGTCTaGATCCTCTACTGGCAGCGG | + |
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Preference number: 4 (lower is better) Translates to: LPDPGPAGCWWYGRSHGSIRAAV*ILYWQR Trigger: CCGCTGCCAGTAGAGGATTCAGACTGCAGCTCTGAT...AGAGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCCGGGGTCTGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR TCA 90 bp | GGGCAGTGGCTGAGCCTGGCATGGCCTGGCCTGAGATGCCTCCAGGTGAATGGGCCATTGGGGAGAAGCTaGGTTTGTTCAGCTCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: GQWLSLAWPGLRCLQVNGPLGRS*VCSAPP Trigger: AGGGGGAGCTGAACAAACTCAGCTTCTCCCCAATGG...CCCATTCACCTGGAGGCATCTCAGGCCAGGCCATGCCAGGCTCAGCCACTGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR TCA 90 bp | CATACCACTCTGCCAGACCCCGGGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGTTTCTaGGGGCCTGGGGTTGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: HTTLPDPGPAGCWWYGRSHGSGF*GPGVEA Trigger: AGCTTCAACCCCAGGCCCTCAGAAACCAGAGCCATG...AGACCTACCATACCACCAGCACCCTGCGGGCCCGGGGTCTGGCAGAGTGGTATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR GCA 90 bp | CAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGTTTCTGAGGGCCTGGGGAGCCCAGGGGTGGGGTaGCCATACCACTCTGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: QGAGGMVGLMALVSEGLGSPGVG*PYHSAR Trigger: TCTGGCAGAGTGGTATGGGCACCCCACCCCTGGGCT...CCCCAGGCCCTCAGAAACCAGAGCCATGAGACCTACCATACCACCAGCACCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CCA 90 bp | CAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGTTTCTGAGGGCCTGGGGCATCTGGGACTTCGATaGGCATGGGCAGGGGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: QGAGGMVGLMALVSEGLGHLGLR*AWAGAE Trigger: CTCGGCCCCTGCCCATGCCCATCGAAGTCCCAGATG...CCCCAGGCCCTCAGAAACCAGAGCCATGAGACCTACCATACCACCAGCACCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR TCA 90 bp | CTCTGCCAGACCCCGGGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTGCCTCTGATGCCATCTaGTTTGTTCGGGATGACACC | + |
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Preference number: 4 (lower is better) Translates to: LCQTPGPQGAGGMVGLMAASDAI*FVRDDT Trigger: GGTGTCATCCCGAACAAATCAGATGGCATCAGAGGC...AGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCCGGGGTCTGGCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR TCA 90 bp | CTGCCAGACCCCGGGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGGTCACAGCTAATTTaGTGGGGTTCAGCAAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LPDPGPAGCWWYGRSHGSGSQLI*WGSARW Trigger: CCACCTTGCTGAACCCCATCAAATTAGCTGTGACCC...AGAGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCCGGGGTCTGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR GCA 90 bp | TGGGGTGCCCATACCACTCTGCCAGACCCCGGGCCCGCAGGGTGCTGGTGGTATGTCAGTGGCCAGGGTTaGAAATTTGTAGGGCTTGCA | + |
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Preference number: 4 (lower is better) Translates to: WGAHTTLPDPGPAGCWWYVSGQG*KFVGLA Trigger: TGCAAGCCCTACAAATTTGCAACCCTGGCCACTGAC...ATACCACCAGCACCCTGCGGGCCCGGGGTCTGGCAGAGTGGTATGGGCACCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR TCA 90 bp | TGGGGTGCCCATACCACTCTGCCAGACCCCGGGCCCGCAGGGTGCTGGTGGTATTTGATGGAGTGCCTCTaGTGCCATCTGATTTGTTCG | + |
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Preference number: 4 (lower is better) Translates to: WGAHTTLPDPGPAGCWWYLMECL*CHLICS Trigger: CGAACAAATCAGATGGCATCAGAGGCACTCCATCAA...ATACCACCAGCACCCTGCGGGCCCGGGGTCTGGCAGAGTGGTATGGGCACCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CCA 90 bp | CTGCCAGACCCCGGGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTAGAAGGCAGAGATGCTaGTCTCATCAGAGCTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: LPDPGPAGCWWYGRSHGSRRQRC*SHQSCS Trigger: ACTGCAGCTCTGATGAGACCAGCATCTCTGCCTTCT...AGAGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCCGGGGTCTGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CCA 90 bp | CCGGGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGTTTCTGAGATGCCTCCAGGTGAATaGGGCCCCTATGTAGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: PGPQGAGGMVGLMALVSEMPPGE*GPYVAL Trigger: CAAGGCTACATAGGGGCCCCATTCACCTGGAGGCAT...CTCAGAAACCAGAGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR TCA 90 bp | TGGGGTGCCCATACCACTCTGCCAGACCCCGGGCCCGCAGGGTGCTGGTGGTATCATAGACTTGGGGTTTaGAAAGGGTTTTGGCAGTTG | + |
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Preference number: 4 (lower is better) Translates to: WGAHTTLPDPGPAGCWWYHRLGV*KGFWQL Trigger: CAACTGCCAAAACCCTTTTCAAACCCCAAGTCTATG...ATACCACCAGCACCCTGCGGGCCCGGGGTCTGGCAGAGTGGTATGGGCACCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR TCA 90 bp | GCTCTGGTTTCTGAGGGCCTGGGGTTGAAGCTGAAAGTAGGTGAGGGGTGTCCTGGAGCTGGTAGAAACTaGCCGGCTGCTTGCCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: ALVSEGLGLKLKVGEGCPGAGRN*PAACPR Trigger: CCTTGGGCAAGCAGCCGGTCAGTTTCTACCAGCTCC...AGGACACCCCTCACCTACTTTCAGCTTCAACCCCAGGCCCTCAGAAACCAGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CCA 90 bp | CTGCCAGACCCCGGGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTCTTGTTGAAGATCCATaGACGATTCTTTGCCTCGGG | + |
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Preference number: 4 (lower is better) Translates to: LPDPGPAGCWWYGRSHGSLVEDP*TILCLG Trigger: CCCGAGGCAAAGAATCGTCCATGGATCTTCAACAAG...AGAGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCCGGGGTCTGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CCA 90 bp | GGTGGTATGGTAGGTCTCATGGCTCTGGTTTCTGAGGGCCTGGGGTTGAAGCTGTCTCCTCCGGCCCGATaGACACGATCTTTTGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: GGMVGLMALVSEGLGLKLSPPAR*TRSFAG Trigger: CCCGGCAAAAGATCGTGTCCATCGGGCCGGAGGAGA...CAGCTTCAACCCCAGGCCCTCAGAAACCAGAGCCATGAGACCTACCATACCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR GCA 90 bp | GGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGTTTCTGAGGGCCTGGGGTTGTCCCTGCAAAGAAGCTaGTGTTGGGCTGGGTCACAG | + |
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Preference number: 4 (lower is better) Translates to: GAGGMVGLMALVSEGLGLSLQRS*CWAGSQ Trigger: CTGTGACCCAGCCCAACAGCAGCTTCTTTGCAGGGA...CAACCCCAGGCCCTCAGAAACCAGAGCCATGAGACCTACCATACCACCAGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR GCA 90 bp | CCGGGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGTTTCTGAGCCATGGACGATTCTTTaGCTCGGGCAACTCATTCTC | + |
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Preference number: 4 (lower is better) Translates to: PGPQGAGGMVGLMALVSEPWTIL*LGQLIL Trigger: GAGAATGAGTTGCCCGAGGCAAAGAATCGTCCATGG...CTCAGAAACCAGAGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CCA 90 bp | CAGTTCTTTAATGAGGGACCTAGACCCAGCCCAGATTTGGAGGAGGAGGGAGTCTGGCTGAGCCTGGCATaGCCTGGCCTGAGATGCCTC | + |
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Preference number: 4 (lower is better) Translates to: QFFNEGPRPSPDLEEEGVWLSLA*PGLRCL Trigger: GAGGCATCTCAGGCCAGGCCATGCCAGGCTCAGCCA...GACTCCCTCCTCCTCCAAATCTGGGCTGGGTCTAGGTCCCTCATTAAAGAACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR GCA 90 bp | TGGATGACCTGCAGTTCTTTAATGAGGGACCTAGACCCAGCCCAGATTTGGAGGTGGCCTGGCCTGAGATaGCTCCAGGTGAATGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: WMTCSSLMRDLDPAQIWRWPGLR*LQVNGA Trigger: GGCCCCATTCACCTGGAGGCATCTCAGGCCAGGCCA...CCTCCAAATCTGGGCTGGGTCTAGGTCCCTCATTAAAGAACTGCAGGTCATCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CCA 90 bp | CCGGGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGTTTCTGAGAAGCTGCTGTTGGGCTaGGTCACAGCTAATTTGATG | + |
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Preference number: 4 (lower is better) Translates to: PGPQGAGGMVGLMALVSEKLLLG*VTANLM Trigger: CATCAAATTAGCTGTGACCCAGCCCAACAGCAGCTT...CTCAGAAACCAGAGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CCA 90 bp | ACCTGCAGTTCTTTAATGAGGGACCTAGACCCAGCCCAGATTTGGAGGAGGAGGCCCCTTGTGGCCATCTaGGACTTCGATGGGCATGGG | + |
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Preference number: 4 (lower is better) Translates to: TCSSLMRDLDPAQIWRRRPLVAI*DFDGHG Trigger: CCCATGCCCATCGAAGTCCCAGATGGCCACAAGGGG...CCTCCTCCTCCAAATCTGGGCTGGGTCTAGGTCCCTCATTAAAGAACTGCAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CCA 90 bp | GACCTGCAGTTCTTTAATGAGGGACCTAGACCCAGCCCAGATTTGGAGGAGGAGCCAGCAGGCCCCTTGTaGCCATCTGGGACTTCGATG | + |
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Preference number: 4 (lower is better) Translates to: DLQFFNEGPRPSPDLEEEPAGPL*PSGTSM Trigger: CATCGAAGTCCCAGATGGCCACAAGGGGCCTGCTGG...CTCCTCCTCCAAATCTGGGCTGGGTCTAGGTCCCTCATTAAAGAACTGCAGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR TCA 90 bp | TGGGGTGCCCATACCACTCTGCCAGACCCCGGGCCCGCAGGGTGCTGGTGGTATGGGCATTCATCATGTTaGAGTTTTCTTTCTTCAGTA | + |
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Preference number: 4 (lower is better) Translates to: WGAHTTLPDPGPAGCWWYGHSSC*SFLSSV Trigger: TACTGAAGAAAGAAAACTTCAACATGATGAATGCCC...ATACCACCAGCACCCTGCGGGCCCGGGGTCTGGCAGAGTGGTATGGGCACCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR TCA 90 bp | AGGGACCTAGACCCAGCCCAGATTTGGAGGAGGAGGGAGTCTAGCAGCTGTGGGCATCCTCCAAGAAGTTaGCCAAATTGCCCTTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: RDLDPAQIWRRRESSSCGHPPRS*PNCPLR Trigger: CCTCAAAGGGCAATTTGGTCAACTTCTTGGAGGATG...CCCACAGCTGCTAGACTCCCTCCTCCTCCAAATCTGGGCTGGGTCTAGGTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR TCA 90 bp | GGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGTTTCTGAGGGCCTGGGGTTGGCGGCTTCAGTAGGTTaGTGGTATCATCCTCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: GAGGMVGLMALVSEGLGLAASVG*WYHPPR Trigger: TCTTGGAGGATGATACCATCAACCTACTGAAGCCGC...CAACCCCAGGCCCTCAGAAACCAGAGCCATGAGACCTACCATACCACCAGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR TCA 90 bp | TGGATGACCTGCAGTTCTTTAATGAGGGACCTAGACCCAGCCCAGATTTGGAGGCCTTGCGCCGCACGGTaGTCTGGATGGGGTAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: WMTCSSLMRDLDPAQIWRPCAAR*SGWGSS Trigger: AGAACTACCCCATCCAGATCACCGTGCGGCGCAAGG...CCTCCAAATCTGGGCTGGGTCTAGGTCCCTCATTAAAGAACTGCAGGTCATCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR GCA 90 bp | GACCTGCAGTTCTTTAATGAGGGACCTAGACCCAGCCCAGATTTGGAGGAGGAGATGGACACGATCTTTTaGCGGGGTTCCTTGCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: DLQFFNEGPRPSPDLEEEMDTIF*RGSLRR Trigger: GCGGCGCAAGGAACCCCGGCAAAAGATCGTGTCCAT...CTCCTCCTCCAAATCTGGGCTGGGTCTAGGTCCCTCATTAAAGAACTGCAGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CCA 90 bp | CCGGGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGTTTCTGAGAAGGGTTTTGGCAGTTaGTCAAGGGCATTCATCATG | + |
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Preference number: 4 (lower is better) Translates to: PGPQGAGGMVGLMALVSEKGFGS*SRAFIM Trigger: CATGATGAATGCCCTTGACCAACTGCCAAAACCCTT...CTCAGAAACCAGAGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CCA 90 bp | GGTGGTATGGTAGGTCTCATGGCTCTGGTTTCTGAGGGCCTGGGGTTGAAGCTGTGGGGTTCAGCAAGGTaGATGAGAAGGCAGAGATGC | + |
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Preference number: 4 (lower is better) Translates to: GGMVGLMALVSEGLGLKLWGSAR*MRRQRC Trigger: GCATCTCTGCCTTCTCATCCACCTTGCTGAACCCCA...CAGCTTCAACCCCAGGCCCTCAGAAACCAGAGCCATGAGACCTACCATACCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CCA 90 bp | CAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGTTTCTGAGGGCCTGGGGCAAAGAAGCTGCTGTTaGGCTGGGTCACAGCTAATT | + |
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Preference number: 4 (lower is better) Translates to: QGAGGMVGLMALVSEGLGQRSCC*AGSQLI Trigger: AATTAGCTGTGACCCAGCCCAACAGCAGCTTCTTTG...CCCCAGGCCCTCAGAAACCAGAGCCATGAGACCTACCATACCACCAGCACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR TCA 90 bp | CAGTTCTTTAATGAGGGACCTAGACCCAGCCCAGATTTGGAGGAGGAGGGAGTCCTGATTTGTTCGGGATaGCACCCGTCACCATGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QFFNEGPRPSPDLEEEGVLICSG*HPSPCR Trigger: CCTGCATGGTGACGGGTGTCATCCCGAACAAATCAG...GACTCCCTCCTCCTCCAAATCTGGGCTGGGTCTAGGTCCCTCATTAAAGAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CCA 90 bp | CAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGTTTCTGAGGGCCTGGGGTGCATTCTTGGCCATTaGGGAGAAGCTGAGTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QGAGGMVGLMALVSEGLGCILGH*GEAEFV Trigger: AACAAACTCAGCTTCTCCCCAATGGCCAAGAATGCA...CCCCAGGCCCTCAGAAACCAGAGCCATGAGACCTACCATACCACCAGCACCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR GCA 90 bp | GCTCTGGTTTCTGAGGGCCTGGGGTTGAAGCTGAAAGTAGGTGAGGGGTGTCCTCAGGTCCTCATTTTCTaGATTCTTGGCCATTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ALVSEGLGLKLKVGEGCPQVLIF*ILGHWG Trigger: TCCCCAATGGCCAAGAATGCAGAAAATGAGGACCTG...AGGACACCCCTCACCTACTTTCAGCTTCAACCCCAGGCCCTCAGAAACCAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR GCA 90 bp | GACCTGCAGTTCTTTAATGAGGGACCTAGACCCAGCCCAGATTTGGAGGAGGAGATGAGAAGGCAGAGATaGTGGTCTCATCAGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DLQFFNEGPRPSPDLEEEMRRQR*WSHQSC Trigger: GCAGCTCTGATGAGACCAGCATCTCTGCCTTCTCAT...CTCCTCCTCCAAATCTGGGCTGGGTCTAGGTCCCTCATTAAAGAACTGCAGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR GCA 90 bp | GACCTGCAGTTCTTTAATGAGGGACCTAGACCCAGCCCAGATTTGGAGGAGGAGTGGTCTCATCAGAGCTaGAGTCTGAATCCTCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: DLQFFNEGPRPSPDLEEEWSHQS*SLNPLL Trigger: CAGTAGAGGATTCAGACTGCAGCTCTGATGAGACCA...CTCCTCCTCCAAATCTGGGCTGGGTCTAGGTCCCTCATTAAAGAACTGCAGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR GCA 90 bp | GACCTGCAGTTCTTTAATGAGGGACCTAGACCCAGCCCAGATTTGGAGGAGGAGACAGAAGATTCTGAGTaGGTTGAGGAGGTTTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: DLQFFNEGPRPSPDLEEETEDSE*VEEVSV Trigger: GACAGAAACCTCCTCAACGCACTCAGAATCTTCTGT...CTCCTCCTCCAAATCTGGGCTGGGTCTAGGTCCCTCATTAAAGAACTGCAGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR TCA 90 bp | TGGATGACCTGCAGTTCTTTAATGAGGGACCTAGACCCAGCCCAGATTTGGAGGTGCCCAAAATCTTGTTaGAGATCCATGGACGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: WMTCSSLMRDLDPAQIWRCPKSC*RSMDDS Trigger: AGAATCGTCCATGGATCTTCAACAAGATTTTGGGCA...CCTCCAAATCTGGGCTGGGTCTAGGTCCCTCATTAAAGAACTGCAGGTCATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CAA 90 bp | TGCCAGACCCCGGGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGCCCACCCCAGCTGTGTaGGCTGCACGGACACTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CQTPGPQGAGGMVGLMALPTPAV*AARTLR Trigger: CCTCAGTGTCCGTGCAGCCAACACAGCTGGGGTGGG...CAGAGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCCGGGGTCTGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CAA 90 bp | TGCCAGACCCCGGGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGGGGAGAAGCTGAGTTaGTTCAGCTCCCCCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CQTPGPQGAGGMVGLMALGEKLS*FSSPSS Trigger: GCTGGAGGGGGAGCTGAACAAACTCAGCTTCTCCCC...CAGAGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCCGGGGTCTGGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CAA 90 bp | CCGGGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGTTTCTGAGTTTTGCCGGGGTTCCTaGCGCCGCACGGTGATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PGPQGAGGMVGLMALVSEFCRGS*RRTVIW Trigger: CCAGATCACCGTGCGGCGCAAGGAACCCCGGCAAAA...CTCAGAAACCAGAGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CAA 90 bp | CATACCACTCTGCCAGACCCCGGGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTGATGGACACGATCTTTaGCCGGGGTTCCTTGCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: HTTLPDPGPAGCWWYGRSDGHDL*PGFLAP Trigger: CGGCGCAAGGAACCCCGGCAAAAGATCGTGTCCATC...AGACCTACCATACCACCAGCACCCTGCGGGCCCGGGGTCTGGCAGAGTGGTATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CAA 90 bp | TGTGGGCAGTGGCTGAGCCTGGCATGGCCTGGCCTGAGATGCCTCCAGGTGAATGCTAGTGGGAGTCCTTaGGTAGTGACGGTCCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: CGQWLSLAWPGLRCLQVNASGSP*VVTVRF Trigger: GAACCGGACCGTCACTACCAAAGGACTCCCACTAGC...ATTCACCTGGAGGCATCTCAGGCCAGGCCATGCCAGGCTCAGCCACTGCCCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CAA 90 bp | CAGACCCCGGGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGTTTCTGAGGGCCTGGGGTaGAAGCTGAAAGTAGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: QTPGPQGAGGMVGLMALVSEGLG*KLKVGE Trigger: CTCACCTACTTTCAGCTTCAACCCCAGGCCCTCAGA...AACCAGAGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCCGGGGTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CAA 90 bp | TGGGGTGCCCATACCACTCTGCCAGACCCCGGGCCCGCAGGGTGCTGGTGGTATAAGAAGTTGACCAAATaGCCCTTTGAGGCTAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: WGAHTTLPDPGPAGCWWYKKLTK*PFEASG Trigger: CCCACTAGCCTCAAAGGGCAATTTGGTCAACTTCTT...ATACCACCAGCACCCTGCGGGCCCGGGGTCTGGCAGAGTGGTATGGGCACCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CAA 90 bp | TGGGGTGCCCATACCACTCTGCCAGACCCCGGGCCCGCAGGGTGCTGGTGGTATAAGATTCTGAGTGCGTaGAGGAGGTTTCTGTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: WGAHTTLPDPGPAGCWWYKILSA*RRFLSP Trigger: TGGAGACAGAAACCTCCTCAACGCACTCAGAATCTT...ATACCACCAGCACCCTGCGGGCCCGGGGTCTGGCAGAGTGGTATGGGCACCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CAA 90 bp | TCTTTAATGAGGGACCTAGACCCAGCCCAGATTTGGAGGAGGAGGGAGTCTAGCGGTCCAGCAGGCCCCTaGTGGCCATCTGGGACTTCG | + |
|
Preference number: 5 (lower is better) Translates to: SLMRDLDPAQIWRRRESSGPAGP*WPSGTS Trigger: CGAAGTCCCAGATGGCCACAAGGGGCCTGCTGGACC...GCTAGACTCCCTCCTCCTCCAAATCTGGGCTGGGTCTAGGTCCCTCATTAAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CAA 90 bp | TGGGGTGCCCATACCACTCTGCCAGACCCCGGGCCCGCAGGGTGCTGGTGGTATTTTAGCTCCATCAGCTaGACAGTAGTGCCCAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: WGAHTTLPDPGPAGCWWYFSSIS*TVVPKI Trigger: GATTTTGGGCACTACTGTCAAGCTGATGGAGCTAAA...ATACCACCAGCACCCTGCGGGCCCGGGGTCTGGCAGAGTGGTATGGGCACCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CAA 90 bp | CCGGGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGTTTCTGAGAGTCAGTGGCCAGGGTaGCAAATTTGTAGGGCTTGC | + |
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Preference number: 5 (lower is better) Translates to: PGPQGAGGMVGLMALVSESQWPG*QICRAC Trigger: GCAAGCCCTACAAATTTGCAACCCTGGCCACTGACT...CTCAGAAACCAGAGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CAA 90 bp | CTCTGCCAGACCCCGGGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTGTCCGGTTCATAGACTaGGGGTTTGAAAAGGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LCQTPGPQGAGGMVGLMAVRFID*GFEKGF Trigger: AAAACCCTTTTCAAACCCCAAGTCTATGAACCGGAC...AGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCCGGGGTCTGGCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CAA 90 bp | CAGACCCCGGGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGTTTCATTTTCTGCATTCTaGGCCATTGGGGAGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QTPGPQGAGGMVGLMALVSFSAF*AIGEKL Trigger: CAGCTTCTCCCCAATGGCCAAGAATGCAGAAAATGA...AACCAGAGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCCGGGGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CAA 90 bp | CATACCACTCTGCCAGACCCCGGGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTACAGCTGTGGAATTGTaGACGGTGTGCTCAAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: HTTLPDPGPAGCWWYGRSTAVEL*TVCSKM Trigger: CATCTTTGAGCACACCGTCAACAATTCCACAGCTGT...AGACCTACCATACCACCAGCACCCTGCGGGCCCGGGGTCTGGCAGAGTGGTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CAA 90 bp | CAGACCCCGGGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGTTATCACAGCTGTGGAATaGTTGACGGTGTGCTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: QTPGPQGAGGMVGLMALVITAVE*LTVCSK Trigger: CTTTGAGCACACCGTCAACAATTCCACAGCTGTGAT...AACCAGAGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCCGGGGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS TCA 90 bp | TCTCCTGTGTCTTGGCCACCTCCTGTAACAGGAGCTGGTAGAAACTaGCCGGCTGCTTGCCCAAGGCGTAGGTCCAGGAAATCACAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SPVSWPPPVTGAGRN*PAACPRRRSRKSQL Trigger: CAGCTGTGATTTCCTGGACCTACGCCTTGGGCAAGCAGCCGGTCAGTTTCTACCAGCTCCTGTTACAGGAGGTGGCCAAGACACAGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CAA 90 bp | CAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGTTTCTGAGGGCCTGGGGTCCATGGACGATTCTTaGCCTCGGGCAACTCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: QGAGGMVGLMALVSEGLGSMDDS*PRATHS Trigger: AGAATGAGTTGCCCGAGGCAAAGAATCGTCCATGGA...CCCCAGGCCCTCAGAAACCAGAGCCATGAGACCTACCATACCACCAGCACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CAA 90 bp | CAGACCCCGGGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGTTGTGCCCAAAATCTTGTaGAAGATCCATGGACGATTC | + |
|
Preference number: 5 (lower is better) Translates to: QTPGPQGAGGMVGLMALVVPKIL*KIHGRF Trigger: GAATCGTCCATGGATCTTCAACAAGATTTTGGGCAC...AACCAGAGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCCGGGGTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS GCA 90 bp | ATGAAGGGGGTGTCCGGCAGGTCCACAACCACAGAAGATTCTGAGTaGGTTGAGGAGGTTTCTGTCTCCAGCTCAGGGTTGTCAAGGTCC | + |
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Preference number: 5 (lower is better) Translates to: MKGVSGRSTTTEDSE*VEEVSVSSSGLSRS Trigger: GGACCTTGACAACCCTGAGCTGGAGACAGAAACCTCCTCAACGCACTCAGAATCTTCTGTGGTTGTGGACCTGCCGGACACCCCCTTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CAA 90 bp | CCGGGCCCGCAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGTTTCTGAGTCATCCTCCAAGAAGTaGACCAAATTGCCCTTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PGPQGAGGMVGLMALVSESSSKK*TKLPFE Trigger: CTCAAAGGGCAATTTGGTCAACTTCTTGGAGGATGA...CTCAGAAACCAGAGCCATGAGACCTACCATACCACCAGCACCCTGCGGGCCCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CAA 90 bp | GCTCTGGTTTCTGAGGGCCTGGGGTTGAAGCTGAAAGTAGGTGAGGGGTGTCCTTGGGTCACAGCTAATTaGATGGGGTTCAGCAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ALVSEGLGLKLKVGEGCPWVTAN*MGFSKV Trigger: CACCTTGCTGAACCCCATCAAATTAGCTGTGACCCA...AGGACACCCCTCACCTACTTTCAGCTTCAACCCCAGGCCCTCAGAAACCAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CAA 90 bp | CAGGGTGCTGGTGGTATGGTAGGTCTCATGGCTCTGGTTTCTGAGGGCCTGGGGGTAGTGCCCAAAATCTaGTTGAAGATCCATGGACGA | + |
|
Preference number: 5 (lower is better) Translates to: QGAGGMVGLMALVSEGLGVVPKI*LKIHGR Trigger: TCGTCCATGGATCTTCAACAAGATTTTGGGCACTAC...CCCCAGGCCCTCAGAAACCAGAGCCATGAGACCTACCATACCACCAGCACCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CAA 90 bp | ACCTGCAGTTCTTTAATGAGGGACCTAGACCCAGCCCAGATTTGGAGGAGGAGGCTGATGCCATCTGATTaGTTCGGGATGACACCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: TCSSLMRDLDPAQIWRRRLMPSD*FGMTPV Trigger: GACGGGTGTCATCCCGAACAAATCAGATGGCATCAG...CCTCCTCCTCCAAATCTGGGCTGGGTCTAGGTCCCTCATTAAAGAACTGCAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS-3UTR CAA 90 bp | CAGTTCTTTAATGAGGGACCTAGACCCAGCCCAGATTTGGAGGAGGAGGGAGTCAGCGGCTTCAGTAGGTaGATGGTATCATCCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: QFFNEGPRPSPDLEEEGVSGFSR*MVSSSK Trigger: CTTGGAGGATGATACCATCAACCTACTGAAGCCGCT...GACTCCCTCCTCCTCCAAATCTGGGCTGGGTCTAGGTCCCTCATTAAAGAACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS CCA 90 bp | CTCCATCAGCTTGACAGTAGTGCCCAAAATCTTGTTGAAGATCCATaGACGATTCTTTGCCTCGGGCAACTCATTCTCCTGTGTCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LHQLDSSAQNLVEDP*TILCLGQLILLCLG Trigger: GCCAAGACACAGGAGAATGAGTTGCCCGAGGCAAAGAATCGTCCATGGATCTTCAACAAGATTTTGGGCACTACTGTCAAGCTGATGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS TCA 90 bp | TGGGAGTCCTTTGGTAGTGACGGTCCGGTTCATAGACTTGGGGTTTaGAAAGGGTTTTGGCAGTTGGTCAAGGGCATTCATCATGTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: WESFGSDGPVHRLGV*KGFWQLVKGIHHVE Trigger: TTCAACATGATGAATGCCCTTGACCAACTGCCAAAACCCTTTTCAAACCCCAAGTCTATGAACCGGACCGTCACTACCAAAGGACTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS CCA 72 bp | CCAGCTCAGGGTTGTCAAGGTCCAGCAGGCCCCTTGTaGCCATCTGGGACTTCGATGGGCATGGGCAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PAQGCQGPAGPL*PSGTSMGMGRG Trigger: GCCCCTGCCCATGCCCATCGAAGTCCCAGATGGCCACAAGGGGCCTGCTGGACCTTGACAACCCTGAGCTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS CCA 72 bp | CCAGATCCTCCAGCCTCCGCATCTCCTCCGGCCCGATaGACACGATCTTTTGCCGGGGTTCCTTGCGCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: PDPPASASPPAR*TRSFAGVPCAA Trigger: TGCGGCGCAAGGAACCCCGGCAAAAGATCGTGTCCATCGGGCCGGAGGAGATGCGGAGGCTGGAGGATCTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS GCA 72 bp | CTCCGCATCTCCTCCGGCCCGATGGACACGATCTTTTaGCGGGGTTCCTTGCGCCGCACGGTGATCTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: LRISSGPMDTIF*RGSLRRTVIWM Trigger: CATCCAGATCACCGTGCGGCGCAAGGAACCCCGGCAAAAGATCGTGTCCATCGGGCCGGAGGAGATGCGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS CAA 72 bp | CCTCCGCATCTCCTCCGGCCCGATGGACACGATCTTTaGCCGGGGTTCCTTGCGCCGCACGGTGATCTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: PPHLLRPDGHDL*PGFLAPHGDLD Trigger: ATCCAGATCACCGTGCGGCGCAAGGAACCCCGGCAAAAGATCGTGTCCATCGGGCCGGAGGAGATGCGGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS CAA 90 bp | ATCCTCCAGCCTCCGCATCTCCTCCGGCCCGATGGACACGATCTTTaGCCGGGGTTCCTTGCGCCGCACGGTGATCTGGATGGGGTAGTT | + |
|
Preference number: 6 (lower is better) Translates to: ILQPPHLLRPDGHDL*PGFLAPHGDLDGVV Trigger: AACTACCCCATCCAGATCACCGTGCGGCGCAAGGAACCCCGGCAAAAGATCGTGTCCATCGGGCCGGAGGAGATGCGGAGGCTGGAGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS TCA 72 bp | TCTTGGCCACCTCCTGTAACAGGAGCTGGTAGAAACTaGCCGGCTGCTTGCCCAAGGCGTAGGTCCAGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: SWPPPVTGAGRN*PAACPRRRSRK Trigger: TTTCCTGGACCTACGCCTTGGGCAAGCAGCCGGTCAGTTTCTACCAGCTCCTGTTACAGGAGGTGGCCAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS GCA 72 bp | GTGTCCGGCAGGTCCACAACCACAGAAGATTCTGAGTaGGTTGAGGAGGTTTCTGTCTCCAGCTCAGGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: VSGRSTTTEDSE*VEEVSVSSSGL Trigger: CAACCCTGAGCTGGAGACAGAAACCTCCTCAACGCACTCAGAATCTTCTGTGGTTGTGGACCTGCCGGACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS CCA 72 bp | GAGCGCCAGGTCCTCATTTTCTGCATTCTTGGCCATTaGGGAGAAGCTGAGTTTGTTCAGCTCCCCCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: ERQVLIFCILGH*GEAEFVQLPLQ Trigger: CTGGAGGGGGAGCTGAACAAACTCAGCTTCTCCCCAATGGCCAAGAATGCAGAAAATGAGGACCTGGCGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS CAA 72 bp | CTCCCACTTGATGGAGTGCCTCTGATGCCATCTGATTaGTTCGGGATGACACCCGTCACCATGCAGGACAAC | + |
|
Preference number: 6 (lower is better) Translates to: LPLDGVPLMPSD*FGMTPVTMQDN Trigger: GTTGTCCTGCATGGTGACGGGTGTCATCCCGAACAAATCAGATGGCATCAGAGGCACTCCATCAAGTGGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS CAA 72 bp | CCGGCAGGTCCACAACCACAGAAGATTCTGAGTGCGTaGAGGAGGTTTCTGTCTCCAGCTCAGGGTTGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: PAGPQPQKILSA*RRFLSPAQGCQ Trigger: TTGACAACCCTGAGCTGGAGACAGAAACCTCCTCAACGCACTCAGAATCTTCTGTGGTTGTGGACCTGCCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS CAA 90 bp | GGCTTCAGTAGGTTGATGGTATCATCCTCCAAGAAGTTGACCAAATaGCCCTTTGAGGCTAGTGGGAGTCCTTTGGTAGTGACGGTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: GFSRLMVSSSKKLTK*PFEASGSPLVVTVR Trigger: CCGGACCGTCACTACCAAAGGACTCCCACTAGCCTCAAAGGGCAATTTGGTCAACTTCTTGGAGGATGATACCATCAACCTACTGAAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS CAA 90 bp | ACTGGCAGCGGCTTCAGTAGGTTGATGGTATCATCCTCCAAGAAGTaGACCAAATTGCCCTTTGAGGCTAGTGGGAGTCCTTTGGTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: TGSGFSRLMVSSSKK*TKLPFEASGSPLVV Trigger: CACTACCAAAGGACTCCCACTAGCCTCAAAGGGCAATTTGGTCAACTTCTTGGAGGATGATACCATCAACCTACTGAAGCCGCTGCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS GCA 72 bp | GCCCAAAATCTTGTTGAAGATCCATGGACGATTCTTTaGCTCGGGCAACTCATTCTCCTGTGTCTTGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: AQNLVEDPWTIL*LGQLILLCLGH Trigger: GTGGCCAAGACACAGGAGAATGAGTTGCCCGAGGCAAAGAATCGTCCATGGATCTTCAACAAGATTTTGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS CAA 72 bp | TTGACCAAATTGCCCTTTGAGGCTAGTGGGAGTCCTTaGGTAGTGACGGTCCGGTTCATAGACTTGGGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LTKLPFEASGSP*VVTVRFIDLGF Trigger: AAACCCCAAGTCTATGAACCGGACCGTCACTACCAAAGGACTCCCACTAGCCTCAAAGGGCAATTTGGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS CAA 90 bp | TCCAAGAAGTTGACCAAATTGCCCTTTGAGGCTAGTGGGAGTCCTTaGGTAGTGACGGTCCGGTTCATAGACTTGGGGTTTGAAAAGGGT | + |
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Preference number: 6 (lower is better) Translates to: SKKLTKLPFEASGSP*VVTVRFIDLGFEKG Trigger: ACCCTTTTCAAACCCCAAGTCTATGAACCGGACCGTCACTACCAAAGGACTCCCACTAGCCTCAAAGGGCAATTTGGTCAACTTCTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS CAA 72 bp | GGCTTCAGTAGGTTGATGGTATCATCCTCCAAGAAGTaGACCAAATTGCCCTTTGAGGCTAGTGGGAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: GFSRLMVSSSKK*TKLPFEASGSP Trigger: AGGACTCCCACTAGCCTCAAAGGGCAATTTGGTCAACTTCTTGGAGGATGATACCATCAACCTACTGAAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS CAA 72 bp | AGCTCCATCAGCTTGACAGTAGTGCCCAAAATCTTGTaGAAGATCCATGGACGATTCTTTGCCTCGGGCAAC | + |
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Preference number: 6 (lower is better) Translates to: SSISLTVVPKIL*KIHGRFFASGN Trigger: GTTGCCCGAGGCAAAGAATCGTCCATGGATCTTCAACAAGATTTTGGGCACTACTGTCAAGCTGATGGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS CAA 90 bp | TTAGGCTTTAGCTCCATCAGCTTGACAGTAGTGCCCAAAATCTTGTaGAAGATCCATGGACGATTCTTTGCCTCGGGCAACTCATTCTCC | + |
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Preference number: 6 (lower is better) Translates to: LGFSSISLTVVPKIL*KIHGRFFASGNSFS Trigger: GGAGAATGAGTTGCCCGAGGCAAAGAATCGTCCATGGATCTTCAACAAGATTTTGGGCACTACTGTCAAGCTGATGGAGCTAAAGCCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS CAA 90 bp | GTGTTAGGCTTTAGCTCCATCAGCTTGACAGTAGTGCCCAAAATCTaGTTGAAGATCCATGGACGATTCTTTGCCTCGGGCAACTCATTC | + |
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Preference number: 6 (lower is better) Translates to: VLGFSSISLTVVPKI*LKIHGRFFASGNSF Trigger: GAATGAGTTGCCCGAGGCAAAGAATCGTCCATGGATCTTCAACAAGATTTTGGGCACTACTGTCAAGCTGATGGAGCTAAAGCCTAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS TCA 72 bp | TTTGGTAGTGACGGTCCGGTTCATAGACTTGGGGTTTaGAAAGGGTTTTGGCAGTTGGTCAAGGGCATTCAT | + |
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Preference number: 6 (lower is better) Translates to: FGSDGPVHRLGV*KGFWQLVKGIH Trigger: ATGAATGCCCTTGACCAACTGCCAAAACCCTTTTCAAACCCCAAGTCTATGAACCGGACCGTCACTACCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS CAA 72 bp | AGGTTGATGGTATCATCCTCCAAGAAGTTGACCAAATaGCCCTTTGAGGCTAGTGGGAGTCCTTTGGTAGTG | + |
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Preference number: 6 (lower is better) Translates to: RLMVSSSKKLTK*PFEASGSPLVV Trigger: CACTACCAAAGGACTCCCACTAGCCTCAAAGGGCAATTTGGTCAACTTCTTGGAGGATGATACCATCAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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| CDS CAA 72 bp | TTTAGCTCCATCAGCTTGACAGTAGTGCCCAAAATCTaGTTGAAGATCCATGGACGATTCTTTGCCTCGGGC | + |
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Preference number: 6 (lower is better) Translates to: FSSISLTVVPKI*LKIHGRFFASG Trigger: GCCCGAGGCAAAGAATCGTCCATGGATCTTCAACAAGATTTTGGGCACTACTGTCAAGCTGATGGAGCTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000158009.6 |
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