RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FNDC5 (Homo sapiens)

Ensembl gene IDs: ENSG00000160097

Ensembl transcript IDs: ENST00000373471.9, ENST00000465346.1, ENST00000481487.1, ENST00000496770.1, ENST00000649537.2

Found 308 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTTGCAGTGTCCCTGTGTCACACAGGCAGCAGCCAAGTCTGGCTCTaGCCAGCTGTCGCCATGCCAGTCCCCGAGCTGACCCCCTCTGCA +
Preference number: 1 (lower is better)
Translates to: LAVSLCHTGSSQVWL*PAVAMPVPELTPSA
Trigger: TGCAGAGGGGGTCAGCTCGGGGACTGGCATGGCGACAGCTGGGCAGAGCCAGACTTGGCTGCTGCCTGTGTGACACAGGGACACTGCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496770.1
3UTR CCA 90 bp TCCTCCCCACTGCTGCAGTTGTCCCTCTCCCTGTGCCCGTGGGCCTaGGGACCAGCTGAGAAGAAAAATGGAATCCTTCTCCCTGCAGAC +
Preference number: 1 (lower is better)
Translates to: SSPLLQLSLSLCPWA*GPAEKKNGILLPAD
Trigger: GTCTGCAGGGAGAAGGATTCCATTTTTCTTCTCAGCTGGTCCCCAGGCCCACGGGCACAGGGAGAGGGACAACTGCAGCAGTGGGGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR CCA 90 bp CTCTCCCCTAAGGAGCCTTGGCCTTGCAGCCCCATTCAGCAGGGATaGAAGTCACAAGACAATGAGTGGAGCCTCATGCCCTCCCATGAG +
Preference number: 1 (lower is better)
Translates to: LSPKEPWPCSPIQQG*KSQDNEWSLMPSHE
Trigger: CTCATGGGAGGGCATGAGGCTCCACTCATTGTCTTGTGACTTCCATCCCTGCTGAATGGGGCTGCAAGGCCAAGGCTCCTTAGGGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR TCA 90 bp GCCTTGAGAGCTCTTGTAGACCGGAAGGAAGGGGCGGTCATTGGGTaGTGGCTTCTGGCTCTCTGGCTTGGGGACCAATGCTCTTATCAT +
Preference number: 1 (lower is better)
Translates to: ALRALVDRKEGAVIG*WLLALWLGDQCSYH
Trigger: ATGATAAGAGCATTGGTCCCCAAGCCAGAGAGCCAGAAGCCATCACCCAATGACCGCCCCTTCCTTCCGGTCTACAAGAGCTCTCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR GCA 90 bp AGCCTCATGCCCTCCCATGAGGAAGCCCTTAGTATTGCTGACATCTaGCCTTTATCCTGTCTCTCCTCCCCAGTGCTGTCACACTTGGGC +
Preference number: 1 (lower is better)
Translates to: SLMPSHEEALSIADI*PLSCLSSPVLSHLG
Trigger: GCCCAAGTGTGACAGCACTGGGGAGGAGAGACAGGATAAAGGGCAGATGTCAGCAATACTAAGGGCTTCCTCATGGGAGGGCATGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR CCA 90 bp CCTTGCAGCCCCATTCAGCAGGGATGGAAGTCACAAGACAATGAGTaGAGCCTCATGCCCTCCCATGAGGAAGCCCTTAGTATTGCTGAC +
Preference number: 1 (lower is better)
Translates to: PCSPIQQGWKSQDNE*SLMPSHEEALSIAD
Trigger: GTCAGCAATACTAAGGGCTTCCTCATGGGAGGGCATGAGGCTCCACTCATTGTCTTGTGACTTCCATCCCTGCTGAATGGGGCTGCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR GCA 90 bp CCATTCAGCAGGGATGGAAGTCACAAGACAATGAGTGGAGCCTCATaGCCTCCCATGAGGAAGCCCTTAGTATTGCTGACATCTGCCCTT +
Preference number: 1 (lower is better)
Translates to: PFSRDGSHKTMSGAS*PPMRKPLVLLTSAL
Trigger: AAGGGCAGATGTCAGCAATACTAAGGGCTTCCTCATGGGAGGGCATGAGGCTCCACTCATTGTCTTGTGACTTCCATCCCTGCTGAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR CCA 90 bp ATGATCCTGCCTGGCAGGCAGCCCCACAGCTTCTCTGATGTTCCTTaGTCTGAAAGACACAGCTTGAGTCAGTCCTTGTGCTTGTCATCT +
Preference number: 1 (lower is better)
Translates to: MILPGRQPHSFSDVP*SERHSLSQSLCLSS
Trigger: AGATGACAAGCACAAGGACTGACTCAAGCTGTGTCTTTCAGACCAAGGAACATCAGAGAAGCTGTGGGGCTGCCTGCCAGGCAGGATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR CCA 90 bp CGCTTGCAAAAGTGTGCATCACACCACAAACATGTCCTTGATGGCTaGATCCAGAAAAGGCTTGATGGCAGCCATGATCCTGCCTGGCAG +
Preference number: 1 (lower is better)
Translates to: RLQKCASHHKHVLDG*IQKRLDGSHDPAWQ
Trigger: CTGCCAGGCAGGATCATGGCTGCCATCAAGCCTTTTCTGGATCCAGCCATCAAGGACATGTTTGTGGTGTGATGCACACTTTTGCAAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR CCA 90 bp CAGCAGCAGGGCTGTAGCCTAAATAAGCCAAGCTCTTGTCCCTTGTaGAAAGAAAAGAGAAGCCCTGCCTGGATGTCTTGTCTTTTTGCC +
Preference number: 1 (lower is better)
Translates to: QQQGCSLNKPSSCPL*KEKRSPAWMSCLFA
Trigger: GGCAAAAAGACAAGACATCCAGGCAGGGCTTCTCTTTTCTTTCCACAAGGGACAAGAGCTTGGCTTATTTAGGCTACAGCCCTGCTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR GCA 90 bp TCTGATGTTCCTTGGTCTGAAAGACACAGCTTGAGTCAGTCCTTGTaGTTGTCATCTCCCAGGGCTTTGTGCATTTTCTCAAAGAGGAAG +
Preference number: 1 (lower is better)
Translates to: SDVPWSERHSLSQSL*LSSPRALCIFSKRK
Trigger: CTTCCTCTTTGAGAAAATGCACAAAGCCCTGGGAGATGACAAGCACAAGGACTGACTCAAGCTGTGTCTTTCAGACCAAGGAACATCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR CCA 90 bp TCTCCCCTAAGGAGCCTTGGCCTTGCAGCCCCATTCAGCAGGGATGGAAGTCACTGGGCCCATGGCCCCTaGCACCCAGTCTACCCCCAG +
Preference number: 2 (lower is better)
Translates to: SPLRSLGLAAPFSRDGSHWAHGP*HPVYPQ
Trigger: CTGGGGGTAGACTGGGTGCCAGGGGCCATGGGCCCA...GTGACTTCCATCCCTGCTGAATGGGGCTGCAAGGCCAAGGCTCCTTAGGGGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR TCA 90 bp ATCAACTTGCAGTGTCCCTGTGTCACACAGGCAGCAGCCAAGTCTGGCTCTGCCTGCCAGTCCCCGAGCTaGCCCCCTCTGCAGTCCAGG +
Preference number: 2 (lower is better)
Translates to: INLQCPCVTQAAAKSGSACQSPS*PPLQSR
Trigger: CCTGGACTGCAGAGGGGGTCAGCTCGGGGACTGGCA...GGCAGAGCCAGACTTGGCTGCTGCCTGTGTGACACAGGGACACTGCAAGTTGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496770.1
3UTR-3UTR TCA 90 bp CTCTTCCTGTCCGTGGTGAATGGCTCAGGCCTGCCTTCCAGCAGCTTCTACTCCCAGCAGTCATCCCTCTaGGTGCAGCCTCAGCCACTG +
Preference number: 2 (lower is better)
Translates to: LFLSVVNGSGLPSSSFYSQQSSL*VQPQPL
Trigger: CAGTGGCTGAGGCTGCACTCAGAGGGATGACTGCTG...GGAGTAGAAGCTGCTGGAAGGCAGGCCTGAGCCATTCACCACGGACAGGAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR CCA 90 bp GGCGAGGAGGCAGAAGGCTGTGTCTCATGCAGCTTTGCCTTTTCCAGAATGGGGCTGAATGGCCAAGACTaGGTCCTGGGCCCATGGCCC +
Preference number: 2 (lower is better)
Translates to: GEEAEGCVSCSFAFSRMGLNGQD*VLGPWP
Trigger: GGGCCATGGGCCCAGGACCCAGTCTTGGCCATTCAG...CCCCATTCTGGAAAAGGCAAAGCTGCATGAGACACAGCCTTCTGCCTCCTCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR CCA 90 bp ACAATGAGTGGAGCCTCATGCCCTCCCATGAGGAAGCCCTTAGTATTGCTGACACTCTCCCTGTGCCCGTaGGCCTGGGGACCAGCTGAG +
Preference number: 2 (lower is better)
Translates to: TMSGASCPPMRKPLVLLTLSLCP*AWGPAE
Trigger: CTCAGCTGGTCCCCAGGCCCACGGGCACAGGGAGAG...TGTCAGCAATACTAAGGGCTTCCTCATGGGAGGGCATGAGGCTCCACTCATTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR CCA 90 bp AACTTTCATGGAACCCTGGATGAGATGGCAAGATATGAAGACCCCAGAGGCCAGTGGGCCCATGGCCCCTaGCACCCAGTCTACCCCCAG +
Preference number: 2 (lower is better)
Translates to: NFHGTLDEMARYEDPRGQWAHGP*HPVYPQ
Trigger: CTGGGGGTAGACTGGGTGCCAGGGGCCATGGGCCCA...CTGGCCTCTGGGGTCTTCATATCTTGCCATCTCATCCAGGGTTCCATGAAAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR CCA 90 bp AAAGAAGATAGAGGATGCAGGCAACCAGCTCAGTCTTCGGGGGAATTTCTCTGCGCCAAGACTGGGTCCTaGGCCCATGGCCCCTGGCAC +
Preference number: 2 (lower is better)
Translates to: KEDRGCRQPAQSSGEFLCAKTGS*AHGPWH
Trigger: GTGCCAGGGGCCATGGGCCCAGGACCCAGTCTTGGC...GCAGAGAAATTCCCCCGAAGACTGAGCTGGTTGCCTGCATCCTCTATCTTCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR CCA 90 bp TCTCCCCTAAGGAGCCTTGGCCTTGCAGCCCCATTCAGCAGGGATGGAAGTCACTGGCTTCTGGCTCTCTaGCTTGGGGACCAATGCTCT +
Preference number: 2 (lower is better)
Translates to: SPLRSLGLAAPFSRDGSHWLLAL*LGDQCS
Trigger: AGAGCATTGGTCCCCAAGCCAGAGAGCCAGAAGCCA...GTGACTTCCATCCCTGCTGAATGGGGCTGCAAGGCCAAGGCTCCTTAGGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR TCA 90 bp AAGACAATGAGTGGAGCCTCATGCCCTCCCATGAGGAAGCCCTTAGTATTGCTGGGGGCGGTCATTGGGTaGTGGCTTCTGGCTCTCTGG +
Preference number: 2 (lower is better)
Translates to: KTMSGASCPPMRKPLVLLGAVIG*WLLALW
Trigger: CCAGAGAGCCAGAAGCCATCACCCAATGACCGCCCC...CAGCAATACTAAGGGCTTCCTCATGGGAGGGCATGAGGCTCCACTCATTGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR GCA 90 bp GAGTCAGTCCTTGTGCTTGTCATCTCCCAGGGCTTTGTGCATTTTCTCAAAGAGTTGTCCCTCTCCCTGTaGCCGTGGGCCTGGGGACCA +
Preference number: 2 (lower is better)
Translates to: ESVLVLVISQGFVHFLKELSLSL*PWAWGP
Trigger: TGGTCCCCAGGCCCACGGGCACAGGGAGAGGGACAA...CTCTTTGAGAAAATGCACAAAGCCCTGGGAGATGACAAGCACAAGGACTGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR GCA 90 bp AAGACAATGAGTGGAGCCTCATGCCCTCCCATGAGGAAGCCCTTAGTATTGCTGCCTCCTCCCCACTGCTaGAGTTGTCCCTCTCCCTGT +
Preference number: 2 (lower is better)
Translates to: KTMSGASCPPMRKPLVLLPPPHC*SCPSPC
Trigger: ACAGGGAGAGGGACAACTGCAGCAGTGGGGAGGAGG...CAGCAATACTAAGGGCTTCCTCATGGGAGGGCATGAGGCTCCACTCATTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR GCA 90 bp CTCTTCCTGTCCGTGGTGAATGGCTCAGGCCTGCCTTCCAGCAGCTTCTACTCCTGTCTCATGCAGCTTTaGCTTTTCCAGAATGGGGCC +
Preference number: 2 (lower is better)
Translates to: LFLSVVNGSGLPSSSFYSCLMQL*LFQNGA
Trigger: GGCCCCATTCTGGAAAAGGCAAAGCTGCATGAGACA...GGAGTAGAAGCTGCTGGAAGGCAGGCCTGAGCCATTCACCACGGACAGGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR CCA 90 bp AAAGAAGATAGAGGATGCAGGCAACCAGCTCAGTCTTCGGGGGAATTTCTCTGCCTGAATGGCCAAGACTaGGTCCTGGGCCCATGGCCC +
Preference number: 2 (lower is better)
Translates to: KEDRGCRQPAQSSGEFLCLNGQD*VLGPWP
Trigger: GGGCCATGGGCCCAGGACCCAGTCTTGGCCATTCAG...GCAGAGAAATTCCCCCGAAGACTGAGCTGGTTGCCTGCATCCTCTATCTTCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR CCA 90 bp GGGCGGTCATTGGGTGATGGCTTCTGGCTCTCTGGCTTGGGGACCAATGCTCTTGCCTTCTTGCAAGGCTaGAAACAGGACAGAAGAAGG +
Preference number: 2 (lower is better)
Translates to: GRSLGDGFWLSGLGTNALAFLQG*KQDRRR
Trigger: CCTTCTTCTGTCCTGTTTCCAGCCTTGCAAGAAGGC...AAGAGCATTGGTCCCCAAGCCAGAGAGCCAGAAGCCATCACCCAATGACCGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR CCA 90 bp AAGACAATGAGTGGAGCCTCATGCCCTCCCATGAGGAAGCCCTTAGTATTGCTGCCTGTCCGTGGTGAATaGCTCAGGCCTGCCTTCCAG +
Preference number: 2 (lower is better)
Translates to: KTMSGASCPPMRKPLVLLPVRGE*LRPAFQ
Trigger: CTGGAAGGCAGGCCTGAGCCATTCACCACGGACAGG...CAGCAATACTAAGGGCTTCCTCATGGGAGGGCATGAGGCTCCACTCATTGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR CAA 90 bp CTGAGTACCAGGCTTGCACTAGGTGTGGTTCTCCCACACCCATCCTaGACCACCAATGGAAGATGCAGATGTCCACCTCTTCCCATGCAG +
Preference number: 2 (lower is better)
Translates to: LSTRLALGVVLPHPS*TTNGRCRCPPLPMQ
Trigger: CTGCATGGGAAGAGGTGGACATCTGCATCTTCCATTGGTGGTCAAGGATGGGTGTGGGAGAACCACACCTAGTGCAAGCCTGGTACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR TCA 90 bp AAGGACATGAGGACCCTGGGTAACTTTCATGGAACCCTGGATGAGATGGCAAGACAGCAGTCATCCCTCTaGGTGCAGCCTCAGCCACTG +
Preference number: 2 (lower is better)
Translates to: KDMRTLGNFHGTLDEMARQQSSL*VQPQPL
Trigger: CAGTGGCTGAGGCTGCACTCAGAGGGATGACTGCTG...TCTTGCCATCTCATCCAGGGTTCCATGAAAGTTACCCAGGGTCCTCATGTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR TCA 90 bp CTCTTCCTGTCCGTGGTGAATGGCTCAGGCCTGCCTTCCAGCAGCTTCTACTCCCCAGAATGCCAGCTGTaGTGTGACTTTTCAGTTGTC +
Preference number: 2 (lower is better)
Translates to: LFLSVVNGSGLPSSSFYSPECQL*CDFSVV
Trigger: GACAACTGAAAAGTCACATCACAGCTGGCATTCTGG...GGAGTAGAAGCTGCTGGAAGGCAGGCCTGAGCCATTCACCACGGACAGGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR TCA 90 bp CACACCACTCAGGCTCTAAGGAAGGACATGAGGACCCTGGGTAACTTTCATGGATCTTCCTGTCCGTGGTaGATGGCTCAGGCCTGCCTT +
Preference number: 2 (lower is better)
Translates to: HTTQALRKDMRTLGNFHGSSCPW*MAQACL
Trigger: AAGGCAGGCCTGAGCCATTCACCACGGACAGGAAGA...TCCATGAAAGTTACCCAGGGTCCTCATGTCCTTCCTTAGAGCCTGAGTGGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR GCA 90 bp CTGCAAAAGGAGAGGATCCAAAATCAACTTGCAGTGTCCCTGTGTCACACAGGCAGCCAAGTCTGGCTCTaGCCAGCTGTCGCCATGCCA +
Preference number: 2 (lower is better)
Translates to: LQKERIQNQLAVSLCHTGSQVWL*PAVAMP
Trigger: TGGCATGGCGACAGCTGGGCAGAGCCAGACTTGGCT...GCCTGTGTGACACAGGGACACTGCAAGTTGATTTTGGATCCTCTCCTTTTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496770.1
3UTR-3UTR CCA 90 bp CCCATGCAGGCATCTGGCAGCCGTAACTCGTCAGTCCTAGGGAAGAGTCTACCTGCCTTCTTGCAAGGCTaGAAACAGGACAGAAGAAGG +
Preference number: 2 (lower is better)
Translates to: PMQASGSRNSSVLGKSLPAFLQG*KQDRRR
Trigger: CCTTCTTCTGTCCTGTTTCCAGCCTTGCAAGAAGGC...AGGTAGACTCTTCCCTAGGACTGACGAGTTACGGCTGCCAGATGCCTGCATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR CCA 90 bp TCTCCCCTAAGGAGCCTTGGCCTTGCAGCCCCATTCAGCAGGGATGGAAGTCACATCCTTGACCACCAATaGAAGATGCAGATGTCCACC +
Preference number: 2 (lower is better)
Translates to: SPLRSLGLAAPFSRDGSHILDHQ*KMQMST
Trigger: GGTGGACATCTGCATCTTCCATTGGTGGTCAAGGAT...GTGACTTCCATCCCTGCTGAATGGGGCTGCAAGGCCAAGGCTCCTTAGGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR GCA 90 bp GGGCGGTCATTGGGTGATGGCTTCTGGCTCTCTGGCTTGGGGACCAATGCTCTTAAAGAAGATAGAGGATaGAGGCAACCAGCTCAGTCT +
Preference number: 2 (lower is better)
Translates to: GRSLGDGFWLSGLGTNALKEDRG*RQPAQS
Trigger: AGACTGAGCTGGTTGCCTGCATCCTCTATCTTCTTT...AAGAGCATTGGTCCCCAAGCCAGAGAGCCAGAAGCCATCACCCAATGACCGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR CCA 90 bp CCCAGCCTTCAGCCTCACTCAACTGAATGGCCAAGACTGGGTCCTGGGCCCATGGGGCCAGATGTTTGTTaGATAATCATCATCAGAACC +
Preference number: 2 (lower is better)
Translates to: PSLQPHSTEWPRLGPGPMGPDVC*IIIIRT
Trigger: GGTTCTGATGATGATTATCCAACAAACATCTGGCCC...CATGGGCCCAGGACCCAGTCTTGGCCATTCAGTTGAGTGAGGCTGAAGGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR CCA 90 bp CTCTTCCTGTCCGTGGTGAATGGCTCAGGCCTGCCTTCCAGCAGCTTCTACTCCAGGTGCTTCTGGAGATaGGAGTTAATAAGAGGCTTC +
Preference number: 2 (lower is better)
Translates to: LFLSVVNGSGLPSSSFYSRCFWR*ELIRGF
Trigger: GAAGCCTCTTATTAACTCCCATCTCCAGAAGCACCT...GGAGTAGAAGCTGCTGGAAGGCAGGCCTGAGCCATTCACCACGGACAGGAAGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR TCA 90 bp CACACCACTCAGGCTCTAAGGAAGGACATGAGGACCCTGGGTAACTTTCATGGAGGCCTGGGGACCAGCTaGGAAGAAAAATGGAATCCT +
Preference number: 2 (lower is better)
Translates to: HTTQALRKDMRTLGNFHGGLGTS*EEKWNP
Trigger: AGGATTCCATTTTTCTTCTCAGCTGGTCCCCAGGCC...TCCATGAAAGTTACCCAGGGTCCTCATGTCCTTCCTTAGAGCCTGAGTGGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR CCA 90 bp CCCAGCCTTCAGCCTCACTCAACTGAATGGCCAAGACTGGGTCCTGGGCCCATGTTGTTGAGGTGCTTCTaGAGATGGGAGTTAATAAGA +
Preference number: 2 (lower is better)
Translates to: PSLQPHSTEWPRLGPGPMLLRCF*RWELIR
Trigger: TCTTATTAACTCCCATCTCCAGAAGCACCTCAACAA...CATGGGCCCAGGACCCAGTCTTGGCCATTCAGTTGAGTGAGGCTGAAGGCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR CAA 90 bp CAGCCCCACAGCTTCTCTGATGTTCCTTGGTCTGAAAGACACAGCTaGAGTCAGTCCTTGTGCTTGTCATCTCCCAGGGCTTTGTGCATT +
Preference number: 2 (lower is better)
Translates to: QPHSFSDVPWSERHS*SQSLCLSSPRALCI
Trigger: AATGCACAAAGCCCTGGGAGATGACAAGCACAAGGACTGACTCAAGCTGTGTCTTTCAGACCAAGGAACATCAGAGAAGCTGTGGGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR TCA 90 bp CCGTGGGCCTGGGGACCAGCTGAGAAGAAAAATGGAATCCTTCTCCCTGCAGACTCATCATCAGAACCATaGGATCCTCTCACATTCTCT +
Preference number: 2 (lower is better)
Translates to: PWAWGPAEKKNGILLPADSSSEP*DPLTFS
Trigger: AGAGAATGTGAGAGGATCTCATGGTTCTGATGATGA...GTCTGCAGGGAGAAGGATTCCATTTTTCTTCTCAGCTGGTCCCCAGGCCCACGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR GCA 90 bp TTGCAAAAGTGTGCATCACACCACAAACATGTCCTTGATGGCTGGATCCAGAAACCTCCTCCCCACTGCTaGAGTTGTCCCTCTCCCTGT +
Preference number: 2 (lower is better)
Translates to: LQKCASHHKHVLDGWIQKPPPHC*SCPSPC
Trigger: ACAGGGAGAGGGACAACTGCAGCAGTGGGGAGGAGG...TTTCTGGATCCAGCCATCAAGGACATGTTTGTGGTGTGATGCACACTTTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR GCA 90 bp AAGACAATGAGTGGAGCCTCATGCCCTCCCATGAGGAAGCCCTTAGTATTGCTGACCACCAATGGAAGATaGAGATGTCCACCTCTTCCC +
Preference number: 2 (lower is better)
Translates to: KTMSGASCPPMRKPLVLLTTNGR*RCPPLP
Trigger: GGGAAGAGGTGGACATCTGCATCTTCCATTGGTGGT...CAGCAATACTAAGGGCTTCCTCATGGGAGGGCATGAGGCTCCACTCATTGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR TCA 90 bp AAAGAAGATAGAGGATGCAGGCAACCAGCTCAGTCTTCGGGGGAATTTCTCTGCGCAGTCACGCTTCAATaGTGTTCACTGAGGGCTTGT +
Preference number: 2 (lower is better)
Translates to: KEDRGCRQPAQSSGEFLCAVTLQ*CSLRAC
Trigger: ACAAGCCCTCAGTGAACATCATTGAAGCGTGACTGC...GCAGAGAAATTCCCCCGAAGACTGAGCTGGTTGCCTGCATCCTCTATCTTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR GCA 90 bp GTGGTTCTCCCACACCCATCCTTGACCACCAATGGAAGATGCAGATGTCCACCTCTGACATTGTTGAGGTaGTTCTGGAGATGGGAGTTA +
Preference number: 2 (lower is better)
Translates to: VVLPHPSLTTNGRCRCPPLTLLR*FWRWEL
Trigger: TAACTCCCATCTCCAGAAGCACCTCAACAATGTCAG...AGGTGGACATCTGCATCTTCCATTGGTGGTCAAGGATGGGTGTGGGAGAACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR CCA 90 bp GTGGTTCTCCCACACCCATCCTTGACCACCAATGGAAGATGCAGATGTCCACCTCATGTCCTTGATGGCTaGATCCAGAAAAGGCTTGAT +
Preference number: 2 (lower is better)
Translates to: VVLPHPSLTTNGRCRCPPHVLDG*IQKRLD
Trigger: ATCAAGCCTTTTCTGGATCCAGCCATCAAGGACATG...AGGTGGACATCTGCATCTTCCATTGGTGGTCAAGGATGGGTGTGGGAGAACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR CAA 90 bp GAGCAGCAGCAGGGCTGTAGCCTAAATAAGCCAAGCTCTTGTCCCTaGTGGAAAGAAAAGAGAAGCCCTGCCTGGATGTCTTGTCTTTTT +
Preference number: 2 (lower is better)
Translates to: EQQQGCSLNKPSSCP*WKEKRSPAWMSCLF
Trigger: AAAAAGACAAGACATCCAGGCAGGGCTTCTCTTTTCTTTCCACAAGGGACAAGAGCTTGGCTTATTTAGGCTACAGCCCTGCTGCTGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR TCA 90 bp AACTTTCATGGAACCCTGGATGAGATGGCAAGATATGAAGACCCCAGAGGCCAGCCAGAATGCCAGCTGTaGTGTGACTTTTCAGTTGTC +
Preference number: 2 (lower is better)
Translates to: NFHGTLDEMARYEDPRGQPECQL*CDFSVV
Trigger: GACAACTGAAAAGTCACATCACAGCTGGCATTCTGG...CTGGCCTCTGGGGTCTTCATATCTTGCCATCTCATCCAGGGTTCCATGAAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR GCA 90 bp CACACCACTCAGGCTCTAAGGAAGGACATGAGGACCCTGGGTAACTTTCATGGACTGACATTGTTGAGGTaGTTCTGGAGATGGGAGTTA +
Preference number: 2 (lower is better)
Translates to: HTTQALRKDMRTLGNFHGLTLLR*FWRWEL
Trigger: TAACTCCCATCTCCAGAAGCACCTCAACAATGTCAG...TCCATGAAAGTTACCCAGGGTCCTCATGTCCTTCCTTAGAGCCTGAGTGGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR CCA 90 bp GTGGTTCTCCCACACCCATCCTTGACCACCAATGGAAGATGCAGATGTCCACCTGGGCCAGATGTTTGTTaGATAATCATCATCAGAACC +
Preference number: 2 (lower is better)
Translates to: VVLPHPSLTTNGRCRCPPGPDVC*IIIIRT
Trigger: GGTTCTGATGATGATTATCCAACAAACATCTGGCCC...AGGTGGACATCTGCATCTTCCATTGGTGGTCAAGGATGGGTGTGGGAGAACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR CAA 90 bp GATGTTCCTTGGTCTGAAAGACACAGCTTGAGTCAGTCCTTGTGCTaGTCATCTCCCAGGGCTTTGTGCATTTTCTCAAAGAGGAAGCCA +
Preference number: 2 (lower is better)
Translates to: DVPWSERHSLSQSLC*SSPRALCIFSKRKP
Trigger: TGGCTTCCTCTTTGAGAAAATGCACAAAGCCCTGGGAGATGACAAGCACAAGGACTGACTCAAGCTGTGTCTTTCAGACCAAGGAACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR TCA 90 bp AAGACAATGAGTGGAGCCTCATGCCCTCCCATGAGGAAGCCCTTAGTATTGCTGTCATCATCAGAACCATaGGATCCTCTCACATTCTCT +
Preference number: 2 (lower is better)
Translates to: KTMSGASCPPMRKPLVLLSSSEP*DPLTFS
Trigger: AGAGAATGTGAGAGGATCTCATGGTTCTGATGATGA...CAGCAATACTAAGGGCTTCCTCATGGGAGGGCATGAGGCTCCACTCATTGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR GCA 90 bp AAGACAATGAGTGGAGCCTCATGCCCTCCCATGAGGAAGCCCTTAGTATTGCTGAGAAAAGAGAAGCCCTaGCTGGATGTCTTGTCTTTT +
Preference number: 2 (lower is better)
Translates to: KTMSGASCPPMRKPLVLLRKEKP*LDVLSF
Trigger: AAAAGACAAGACATCCAGGCAGGGCTTCTCTTTTCT...CAGCAATACTAAGGGCTTCCTCATGGGAGGGCATGAGGCTCCACTCATTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR GCA 90 bp TTGCAAAAGTGTGCATCACACCACAAACATGTCCTTGATGGCTGGATCCAGAAATGGAATCCTTCTCCCTaGAGACAGGCAGTCACGCTT +
Preference number: 2 (lower is better)
Translates to: LQKCASHHKHVLDGWIQKWNPSP*RQAVTL
Trigger: AAGCGTGACTGCCTGTCTGCAGGGAGAAGGATTCCA...TTTCTGGATCCAGCCATCAAGGACATGTTTGTGGTGTGATGCACACTTTTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR CCA 90 bp ATAAGGGTCAAAGAAGATAGAGGATGCAGGCAACCAGCTCAGTCTTCGGGGGAAAGGTGCTTCTGGAGATaGGAGTTAATAAGAGGCTTC +
Preference number: 2 (lower is better)
Translates to: IRVKEDRGCRQPAQSSGERCFWR*ELIRGF
Trigger: GAAGCCTCTTATTAACTCCCATCTCCAGAAGCACCT...TTCCCCCGAAGACTGAGCTGGTTGCCTGCATCCTCTATCTTCTTTGACCCTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR CCA 90 bp AAGACAATGAGTGGAGCCTCATGCCCTCCCATGAGGAAGCCCTTAGTATTGCTGTTCTCTGATGTTCCTTaGTCTGAAAGACACAGCTTG +
Preference number: 2 (lower is better)
Translates to: KTMSGASCPPMRKPLVLLFSDVP*SERHSL
Trigger: CAAGCTGTGTCTTTCAGACCAAGGAACATCAGAGAA...CAGCAATACTAAGGGCTTCCTCATGGGAGGGCATGAGGCTCCACTCATTGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR GCA 90 bp AACTTTCATGGAACCCTGGATGAGATGGCAAGATATGAAGACCCCAGAGGCCAGAGAAAAGAGAAGCCCTaGCTGGATGTCTTGTCTTTT +
Preference number: 2 (lower is better)
Translates to: NFHGTLDEMARYEDPRGQRKEKP*LDVLSF
Trigger: AAAAGACAAGACATCCAGGCAGGGCTTCTCTTTTCT...CTGGCCTCTGGGGTCTTCATATCTTGCCATCTCATCCAGGGTTCCATGAAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR GCA 72 bp TCCCTGTGTCACACAGGCAGCAGCCAAGTCTGGCTCTaGCCAGCTGTCGCCATGCCAGTCCCCGAGCTGACC +
Preference number: 3 (lower is better)
Translates to: SLCHTGSSQVWL*PAVAMPVPELT
Trigger: GGTCAGCTCGGGGACTGGCATGGCGACAGCTGGGCAGAGCCAGACTTGGCTGCTGCCTGTGTGACACAGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496770.1
3UTR CCA 72 bp CTTTTCAAACCCAGCCTTCAGCCTCACTCAACTGAATaGCCAAGACTGGGTCCTGGGCCCATGGCCCCTGGC +
Preference number: 3 (lower is better)
Translates to: LFKPSLQPHSTE*PRLGPGPMAPG
Trigger: GCCAGGGGCCATGGGCCCAGGACCCAGTCTTGGCCATTCAGTTGAGTGAGGCTGAAGGCTGGGTTTGAAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR CAA 90 bp GGGCGGTCATTGGGTGATGGCTTCTGGCTCTCTGGCTTGGGGACCAATGCTCTTCAGCCACTGACATTGTaGAGGTGCTTCTGGAGATGG +
Preference number: 3 (lower is better)
Translates to: GRSLGDGFWLSGLGTNALQPLTL*RCFWRW
Trigger: CCATCTCCAGAAGCACCTCAACAATGTCAGTGGCTG...AAGAGCATTGGTCCCCAAGCCAGAGAGCCAGAAGCCATCACCCAATGACCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR TCA 72 bp AGTGGTGATAGCCAGAGCTGCTCTTCCTGTCCGTGGTaGATGGCTCAGGCCTGCCTTCCAGCAGCTTCTACT +
Preference number: 3 (lower is better)
Translates to: SGDSQSCSSCPW*MAQACLPAAST
Trigger: AGTAGAAGCTGCTGGAAGGCAGGCCTGAGCCATTCACCACGGACAGGAAGAGCAGCTCTGGCTATCACCACT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR CCA 72 bp AAGGAGCCTTGGCCTTGCAGCCCCATTCAGCAGGGATaGAAGTCACAAGACAATGAGTGGAGCCTCATGCCC +
Preference number: 3 (lower is better)
Translates to: KEPWPCSPIQQG*KSQDNEWSLMP
Trigger: GGGCATGAGGCTCCACTCATTGTCTTGTGACTTCCATCCCTGCTGAATGGGGCTGCAAGGCCAAGGCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR CAA 90 bp GAGTCAGTCCTTGTGCTTGTCATCTCCCAGGGCTTTGTGCATTTTCTCAAAGAGTCCCCACTGCTGCAGTaGTCCCTCTCCCTGTGCCCG +
Preference number: 3 (lower is better)
Translates to: ESVLVLVISQGFVHFLKESPLLQ*SLSLCP
Trigger: CGGGCACAGGGAGAGGGACAACTGCAGCAGTGGGGA...CTCTTTGAGAAAATGCACAAAGCCCTGGGAGATGACAAGCACAAGGACTGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR CAA 90 bp ACAATGAGTGGAGCCTCATGCCCTCCCATGAGGAAGCCCTTAGTATTGCTGACAGTGGCAGACCCAGCCTaGAGAGCTCTTGTAGACCGG +
Preference number: 3 (lower is better)
Translates to: TMSGASCPPMRKPLVLLTVADPA*RALVDR
Trigger: CCGGTCTACAAGAGCTCTCAAGGCTGGGTCTGCCAC...TGTCAGCAATACTAAGGGCTTCCTCATGGGAGGGCATGAGGCTCCACTCATTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR CCA 72 bp AGGTGTGGTTCTCCCACACCCATCCTTGACCACCAATaGAAGATGCAGATGTCCACCTCTTCCCATGCAGGC +
Preference number: 3 (lower is better)
Translates to: RCGSPTPILDHQ*KMQMSTSSHAG
Trigger: GCCTGCATGGGAAGAGGTGGACATCTGCATCTTCCATTGGTGGTCAAGGATGGGTGTGGGAGAACCACACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR CCA 72 bp ACCGGAAGGAAGGGGCGGTCATTGGGTGATGGCTTCTaGCTCTCTGGCTTGGGGACCAATGCTCTTATCATT +
Preference number: 3 (lower is better)
Translates to: TGRKGRSLGDGF*LSGLGTNALII
Trigger: AATGATAAGAGCATTGGTCCCCAAGCCAGAGAGCCAGAAGCCATCACCCAATGACCGCCCCTTCCTTCCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR CCA 72 bp CCCATTCAGCAGGGATGGAAGTCACAAGACAATGAGTaGAGCCTCATGCCCTCCCATGAGGAAGCCCTTAGT +
Preference number: 3 (lower is better)
Translates to: PIQQGWKSQDNE*SLMPSHEEALS
Trigger: ACTAAGGGCTTCCTCATGGGAGGGCATGAGGCTCCACTCATTGTCTTGTGACTTCCATCCCTGCTGAATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR CAA 90 bp CTCTTCCTGTCCGTGGTGAATGGCTCAGGCCTGCCTTCCAGCAGCTTCTACTCCGAGAGGGCCAGATGTTaGTTGGATAATCATCATCAG +
Preference number: 3 (lower is better)
Translates to: LFLSVVNGSGLPSSSFYSERARC*LDNHHQ
Trigger: CTGATGATGATTATCCAACAAACATCTGGCCCTCTC...GGAGTAGAAGCTGCTGGAAGGCAGGCCTGAGCCATTCACCACGGACAGGAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR CCA 72 bp GGACCCTGGGTAACTTTCATGGAACCCTGGATGAGATaGCAAGATATGAAGACCCCAGAGGCCAGTGGTGAT +
Preference number: 3 (lower is better)
Translates to: GPWVTFMEPWMR*QDMKTPEASGD
Trigger: ATCACCACTGGCCTCTGGGGTCTTCATATCTTGCCATCTCATCCAGGGTTCCATGAAAGTTACCCAGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR CAA 90 bp AGGAGAGGCGAGGAGGCAGAAGGCTGTGTCTCATGCAGCTTTGCCTTTTCCAGACCAAGCTCTTGTCCCTaGTGGAAAGAAAAGAGAAGC +
Preference number: 3 (lower is better)
Translates to: RRGEEAEGCVSCSFAFSRPSSCP*WKEKRS
Trigger: GCTTCTCTTTTCTTTCCACAAGGGACAAGAGCTTGG...TCTGGAAAAGGCAAAGCTGCATGAGACACAGCCTTCTGCCTCCTCGCCTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR CAA 90 bp CACACCACTCAGGCTCTAAGGAAGGACATGAGGACCCTGGGTAACTTTCATGGAAGTCAGTCCTTGTGCTaGTCATCTCCCAGGGCTTTG +
Preference number: 3 (lower is better)
Translates to: HTTQALRKDMRTLGNFHGSQSLC*SSPRAL
Trigger: CAAAGCCCTGGGAGATGACAAGCACAAGGACTGACT...TCCATGAAAGTTACCCAGGGTCCTCATGTCCTTCCTTAGAGCCTGAGTGGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR CAA 90 bp CTAAGGAAGGACATGAGGACCCTGGGTAACTTTCATGGAACCCTGGATGAGATGAGTCAGTCCTTGTGCTaGTCATCTCCCAGGGCTTTG +
Preference number: 3 (lower is better)
Translates to: LRKDMRTLGNFHGTLDEMSQSLC*SSPRAL
Trigger: CAAAGCCCTGGGAGATGACAAGCACAAGGACTGACT...CATCTCATCCAGGGTTCCATGAAAGTTACCCAGGGTCCTCATGTCCTTCCTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR GCA 72 bp AGGGATGGAAGTCACAAGACAATGAGTGGAGCCTCATaGCCTCCCATGAGGAAGCCCTTAGTATTGCTGACA +
Preference number: 3 (lower is better)
Translates to: RDGSHKTMSGAS*PPMRKPLVLLT
Trigger: TGTCAGCAATACTAAGGGCTTCCTCATGGGAGGGCATGAGGCTCCACTCATTGTCTTGTGACTTCCATCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR CAA 90 bp AAGACAATGAGTGGAGCCTCATGCCCTCCCATGAGGAAGCCCTTAGTATTGCTGCCAAGCTCTTGTCCCTaGTGGAAAGAAAAGAGAAGC +
Preference number: 3 (lower is better)
Translates to: KTMSGASCPPMRKPLVLLPSSCP*WKEKRS
Trigger: GCTTCTCTTTTCTTTCCACAAGGGACAAGAGCTTGG...CAGCAATACTAAGGGCTTCCTCATGGGAGGGCATGAGGCTCCACTCATTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR CAA 90 bp CTAAGGAAGGACATGAGGACCCTGGGTAACTTTCATGGAACCCTGGATGAGATGTCATCTCCCAGGGCTTaGTGCATTTTCTCAAAGAGG +
Preference number: 3 (lower is better)
Translates to: LRKDMRTLGNFHGTLDEMSSPRA*CIFSKR
Trigger: CCTCTTTGAGAAAATGCACAAAGCCCTGGGAGATGA...CATCTCATCCAGGGTTCCATGAAAGTTACCCAGGGTCCTCATGTCCTTCCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR GCA 72 bp CCTTGGTCTGAAAGACACAGCTTGAGTCAGTCCTTGTaGTTGTCATCTCCCAGGGCTTTGTGCATTTTCTCA +
Preference number: 3 (lower is better)
Translates to: PWSERHSLSQSL*LSSPRALCIFS
Trigger: TGAGAAAATGCACAAAGCCCTGGGAGATGACAAGCACAAGGACTGACTCAAGCTGTGTCTTTCAGACCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR CCA 72 bp GGCTGTAGCCTAAATAAGCCAAGCTCTTGTCCCTTGTaGAAAGAAAAGAGAAGCCCTGCCTGGATGTCTTGT +
Preference number: 3 (lower is better)
Translates to: GCSLNKPSSCPL*KEKRSPAWMSC
Trigger: ACAAGACATCCAGGCAGGGCTTCTCTTTTCTTTCCACAAGGGACAAGAGCTTGGCTTATTTAGGCTACAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR CAA 90 bp AACTTTCATGGAACCCTGGATGAGATGGCAAGATATGAAGACCCCAGAGGCCAGGAGAGGGCCAGATGTTaGTTGGATAATCATCATCAG +
Preference number: 3 (lower is better)
Translates to: NFHGTLDEMARYEDPRGQERARC*LDNHHQ
Trigger: CTGATGATGATTATCCAACAAACATCTGGCCCTCTC...CTGGCCTCTGGGGTCTTCATATCTTGCCATCTCATCCAGGGTTCCATGAAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR CAA 90 bp AAAGAAGATAGAGGATGCAGGCAACCAGCTCAGTCTTCGGGGGAATTTCTCTGCGGATGTCTTGTCTTTTaGCCTTTTCAAACCCAGCCT +
Preference number: 3 (lower is better)
Translates to: KEDRGCRQPAQSSGEFLCGCLVF*PFQTQP
Trigger: AGGCTGGGTTTGAAAAGGCAAAAAGACAAGACATCC...GCAGAGAAATTCCCCCGAAGACTGAGCTGGTTGCCTGCATCCTCTATCTTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR CAA 90 bp ATAAGGGTCAAAGAAGATAGAGGATGCAGGCAACCAGCTCAGTCTTCGGGGGAAGGATGTCTTGTCTTTTaGCCTTTTCAAACCCAGCCT +
Preference number: 3 (lower is better)
Translates to: IRVKEDRGCRQPAQSSGEGCLVF*PFQTQP
Trigger: AGGCTGGGTTTGAAAAGGCAAAAAGACAAGACATCC...TTCCCCCGAAGACTGAGCTGGTTGCCTGCATCCTCTATCTTCTTTGACCCTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR CAA 90 bp ACAATGAGTGGAGCCTCATGCCCTCCCATGAGGAAGCCCTTAGTATTGCTGACAGATGTGACTTTTCAGTaGTCCAAGCTAGCATTTCTG +
Preference number: 3 (lower is better)
Translates to: TMSGASCPPMRKPLVLLTDVTFQ*SKLAFL
Trigger: CAGAAATGCTAGCTTGGACAACTGAAAAGTCACATC...TGTCAGCAATACTAAGGGCTTCCTCATGGGAGGGCATGAGGCTCCACTCATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR-3UTR CAA 90 bp ACAATGAGTGGAGCCTCATGCCCTCCCATGAGGAAGCCCTTAGTATTGCTGACATACTTCCTAAATAAATaGGACCAGTACCTTCCAAAC +
Preference number: 3 (lower is better)
Translates to: TMSGASCPPMRKPLVLLTYFLNK*DQYLPN
Trigger: GTTTGGAAGGTACTGGTCCAATTTATTTAGGAAGTA...TGTCAGCAATACTAAGGGCTTCCTCATGGGAGGGCATGAGGCTCCACTCATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR GCA 72 bp TCCAAAAGAGACAAACCAGGTAACATCTTACACGCTTaGAAAAGTGTGCATCACACCACAAACATGTCCTTG +
Preference number: 3 (lower is better)
Translates to: SKRDKPGNILHA*KSVHHTTNMSL
Trigger: CAAGGACATGTTTGTGGTGTGATGCACACTTTTGCAAGCGTGTAAGATGTTACCTGGTTTGTCTCTTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp GAATGGCCAAGACTGGGTCCTGGGCCCATGGCCCCTGGCACCCAGTCTACCCCCGCCAAGACTGGGTCCTaGGCCCATGGCCCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: EWPRLGPGPMAPGTQSTPAKTGS*AHGPWH
Trigger: GTGCCAGGGGCCATGGGCCCAGGACCCAGTCTTGGC...GGGGGTAGACTGGGTGCCAGGGGCCATGGGCCCAGGACCCAGTCTTGGCCATTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp CCCAGCCTTCAGCCTCACTCAACTGAATGGCCAAGACTGGGTCCTGGGCCCATGACCCGGGGTGTATGGTaGCTCCTCCGGCCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: PSLQPHSTEWPRLGPGPMTRGVW*LLRPAG
Trigger: GCCTGCCGGCCGGAGGAGCCACCATACACCCCGGGT...CATGGGCCCAGGACCCAGTCTTGGCCATTCAGTTGAGTGAGGCTGAAGGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR TCA 90 bp GAATGGCCAAGACTGGGTCCTGGGCCCATGGCCCCTGGCACCCAGTCTACCCCCTCTTCCTGTCCGTGGTaGATGGCTCAGGCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: EWPRLGPGPMAPGTQSTPSSCPW*MAQACL
Trigger: AAGGCAGGCCTGAGCCATTCACCACGGACAGGAAGA...GGGGGTAGACTGGGTGCCAGGGGCCATGGGCCCAGGACCCAGTCTTGGCCATTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp CTCTTCCTGTCCGTGGTGAATGGCTCAGGCCTGCCTTCCAGCAGCTTCTACTCCACCCGGGGTGTATGGTaGCTCCTCCGGCCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LFLSVVNGSGLPSSSFYSTRGVW*LLRPAG
Trigger: GCCTGCCGGCCGGAGGAGCCACCATACACCCCGGGT...GGAGTAGAAGCTGCTGGAAGGCAGGCCTGAGCCATTCACCACGGACAGGAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp CCCAGCCTTCAGCCTCACTCAACTGAATGGCCAAGACTGGGTCCTGGGCCCATGTGGGCCCATGGCCCCTaGCACCCAGTCTACCCCCAG +
Preference number: 4 (lower is better)
Translates to: PSLQPHSTEWPRLGPGPMWAHGP*HPVYPQ
Trigger: CTGGGGGTAGACTGGGTGCCAGGGGCCATGGGCCCA...CATGGGCCCAGGACCCAGTCTTGGCCATTCAGTTGAGTGAGGCTGAAGGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp GAATGGCCAAGACTGGGTCCTGGGCCCATGGCCCCTGGCACCCAGTCTACCCCCCCTGTCCGCAGCTGTTaGTTCCTCCCCATCTCTTTC +
Preference number: 4 (lower is better)
Translates to: EWPRLGPGPMAPGTQSTPPVRSC*FLPISF
Trigger: GAAAGAGATGGGGAGGAACCAACAGCTGCGGACAGG...GGGGGTAGACTGGGTGCCAGGGGCCATGGGCCCAGGACCCAGTCTTGGCCATTC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR TCA 90 bp GGGCGGTCATTGGGTGATGGCTTCTGGCTCTCTGGCTTGGGGACCAATGCTCTTGACGTTCACTGGGGCTaGGGGACTGTCCGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: GRSLGDGFWLSGLGTNALDVHWG*GTVRLH
Trigger: GTGCAGGCGGACAGTCCCTCAGCCCCAGTGAACGTC...AAGAGCATTGGTCCCCAAGCCAGAGAGCCAGAAGCCATCACCCAATGACCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR GCA 90 bp CCCATGCAGGCATCTGGCAGCCGTAACTCGTCAGTCCTAGGGAAGAGTCTACCTTTGTCCCTCTCCCTGTaGCCGTGGGCCTGGGGACCA +
Preference number: 4 (lower is better)
Translates to: PMQASGSRNSSVLGKSLPLSLSL*PWAWGP
Trigger: TGGTCCCCAGGCCCACGGGCACAGGGAGAGGGACAA...AGGTAGACTCTTCCCTAGGACTGACGAGTTACGGCTGCCAGATGCCTGCATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp GTGGTTCTCCCACACCCATCCTTGACCACCAATGGAAGATGCAGATGTCCACCTGCGACCCGGGGTGTATaGTGGCTCCTCCGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: VVLPHPSLTTNGRCRCPPATRGV*WLLRPA
Trigger: TGCCGGCCGGAGGAGCCACCATACACCCCGGGTCGC...AGGTGGACATCTGCATCTTCCATTGGTGGTCAAGGATGGGTGTGGGAGAACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp TCAACTTGCAGTGTCCCTGTGTCACACAGGCAGCAGCCAAGTCTGGCTCTGCCCCACAGGCTCGCTGGCTaGGCTCTGGCCCTGAATGGA +
Preference number: 4 (lower is better)
Translates to: STCSVPVSHRQQPSLALPHRLAG*ALALNG
Trigger: TCCATTCAGGGCCAGAGCCCAGCCAGCGAGCCTGTG...GGGCAGAGCCAGACTTGGCTGCTGCCTGTGTGACACAGGGACACTGCAAGTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496770.1
CDS-3UTR TCA 90 bp AGGAGAGGCGAGGAGGCAGAAGGCTGTGTCTCATGCAGCTTTGCCTTTTCCAGAGCTGGGCTCTGGCCCTaGATGGAGATGGCCTGCACG +
Preference number: 4 (lower is better)
Translates to: RRGEEAEGCVSCSFAFSRAGLWP*MEMACT
Trigger: CGTGCAGGCCATCTCCATTCAGGGCCAGAGCCCAGC...TCTGGAAAAGGCAAAGCTGCATGAGACACAGCCTTCTGCCTCCTCGCCTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR TCA 90 bp AGGAGAGGCGAGGAGGCAGAAGGCTGTGTCTCATGCAGCTTTGCCTTTTCCAGACCTCACGCGGGGTCTTaGAGAGCACAGGCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: RRGEEAEGCVSCSFAFSRPHAGS*RAQARW
Trigger: CCAGCGAGCCTGTGCTCTTCAAGACCCCGCGTGAGG...TCTGGAAAAGGCAAAGCTGCATGAGACACAGCCTTCTGCCTCCTCGCCTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR TCA 90 bp CCCAGCCTTCAGCCTCACTCAACTGAATGGCCAAGACTGGGTCCTGGGCCCATGTCTTCCTGTCCGTGGTaGATGGCTCAGGCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: PSLQPHSTEWPRLGPGPMSSCPW*MAQACL
Trigger: AAGGCAGGCCTGAGCCATTCACCACGGACAGGAAGA...CATGGGCCCAGGACCCAGTCTTGGCCATTCAGTTGAGTGAGGCTGAAGGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR GCA 90 bp TCTCCCCTAAGGAGCCTTGGCCTTGCAGCCCCATTCAGCAGGGATGGAAGTCACCCTCCTCCCCACTGCTaGAGTTGTCCCTCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: SPLRSLGLAAPFSRDGSHPPPHC*SCPSPC
Trigger: ACAGGGAGAGGGACAACTGCAGCAGTGGGGAGGAGG...GTGACTTCCATCCCTGCTGAATGGGGCTGCAAGGCCAAGGCTCCTTAGGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR GCA 90 bp CCCAGCCTTCAGCCTCACTCAACTGAATGGCCAAGACTGGGTCCTGGGCCCATGGTCCACCTCTTCCCATaGAGGCATCTGGCAGCCGTA +
Preference number: 4 (lower is better)
Translates to: PSLQPHSTEWPRLGPGPMVHLFP*RHLAAV
Trigger: TACGGCTGCCAGATGCCTGCATGGGAAGAGGTGGAC...CATGGGCCCAGGACCCAGTCTTGGCCATTCAGTTGAGTGAGGCTGAAGGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp ACAATGAGTGGAGCCTCATGCCCTCCCATGAGGAAGCCCTTAGTATTGCTGACAGCGACCCGGGGTGTATaGTGGCTCCTCCGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: TMSGASCPPMRKPLVLLTATRGV*WLLRPA
Trigger: TGCCGGCCGGAGGAGCCACCATACACCCCGGGTCGC...TGTCAGCAATACTAAGGGCTTCCTCATGGGAGGGCATGAGGCTCCACTCATTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp GAATGGCCAAGACTGGGTCCTGGGCCCATGGCCCCTGGCACCCAGTCTACCCCCCCCATTCAGCAGGGATaGAAGTCACAAGACAATGAG +
Preference number: 4 (lower is better)
Translates to: EWPRLGPGPMAPGTQSTPPIQQG*KSQDNE
Trigger: CTCATTGTCTTGTGACTTCCATCCCTGCTGAATGGG...GGGGGTAGACTGGGTGCCAGGGGCCATGGGCCCAGGACCCAGTCTTGGCCATTC
60% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR TCA 90 bp TTGCAGTGTCCCTGTGTCACACAGGCAGCAGCCAAGTCTGGCTCTGCCCAGCTGTGTTCACCTCCTGGATaGAGCGCAGCATCCGCACAT +
Preference number: 4 (lower is better)
Translates to: LQCPCVTQAAAKSGSAQLCSPPG*SAASAH
Trigger: ATGTGCGGATGCTGCGCTTCATCCAGGAGGTGAACA...CAGCTGGGCAGAGCCAGACTTGGCTGCTGCCTGTGTGACACAGGGACACTGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496770.1
CDS-3UTR TCA 90 bp AAATCAACTTGCAGTGTCCCTGTGTCACACAGGCAGCAGCCAAGTCTGGCTCTGGCTGGGCTCTGGCCCTaGATGGAGATGGCCTGCACG +
Preference number: 4 (lower is better)
Translates to: KSTCSVPVSHRQQPSLALAGLWP*MEMACT
Trigger: CGTGCAGGCCATCTCCATTCAGGGCCAGAGCCCAGC...CAGAGCCAGACTTGGCTGCTGCCTGTGTGACACAGGGACACTGCAAGTTGATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496770.1
CDS-3UTR GCA 90 bp GAATGGCCAAGACTGGGTCCTGGGCCCATGGCCCCTGGCACCCAGTCTACCCCCAGTATTGCTGACATCTaGCCTTTATCCTGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: EWPRLGPGPMAPGTQSTPSIADI*PLSCLS
Trigger: GGAGAGACAGGATAAAGGGCAGATGTCAGCAATACT...GGGGGTAGACTGGGTGCCAGGGGCCATGGGCCCAGGACCCAGTCTTGGCCATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp CACACCACTCAGGCTCTAAGGAAGGACATGAGGACCCTGGGTAACTTTCATGGATGGGCCCATGGCCCCTaGCACCCAGTCTACCCCCAG +
Preference number: 4 (lower is better)
Translates to: HTTQALRKDMRTLGNFHGWAHGP*HPVYPQ
Trigger: CTGGGGGTAGACTGGGTGCCAGGGGCCATGGGCCCA...TCCATGAAAGTTACCCAGGGTCCTCATGTCCTTCCTTAGAGCCTGAGTGGTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp CACACCACTCAGGCTCTAAGGAAGGACATGAGGACCCTGGGTAACTTTCATGGAGCCAAGACTGGGTCCTaGGCCCATGGCCCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: HTTQALRKDMRTLGNFHGAKTGS*AHGPWH
Trigger: GTGCCAGGGGCCATGGGCCCAGGACCCAGTCTTGGC...TCCATGAAAGTTACCCAGGGTCCTCATGTCCTTCCTTAGAGCCTGAGTGGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp AAGACAATGAGTGGAGCCTCATGCCCTCCCATGAGGAAGCCCTTAGTATTGCTGCTCTCCCTGTGCCCGTaGGCCTGGGGACCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: KTMSGASCPPMRKPLVLLLSLCP*AWGPAE
Trigger: CTCAGCTGGTCCCCAGGCCCACGGGCACAGGGAGAG...CAGCAATACTAAGGGCTTCCTCATGGGAGGGCATGAGGCTCCACTCATTGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp GGCGAGGAGGCAGAAGGCTGTGTCTCATGCAGCTTTGCCTTTTCCAGAATGGGGAGCCATGATCCTGCCTaGCAGGCAGCCCCACAGCTT +
Preference number: 4 (lower is better)
Translates to: GEEAEGCVSCSFAFSRMGSHDPA*QAAPQL
Trigger: AAGCTGTGGGGCTGCCTGCCAGGCAGGATCATGGCT...CCCCATTCTGGAAAAGGCAAAGCTGCATGAGACACAGCCTTCTGCCTCCTCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp AAATCAACTTGCAGTGTCCCTGTGTCACACAGGCAGCAGCCAAGTCTGGCTCTGGGACCTCGACCCGTTTaGGAGAAGAGCCCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: KSTCSVPVSHRQQPSLALGPRPV*EKSPGA
Trigger: GGCTCCGGGGCTCTTCTCCCAAACGGGTCGAGGTCC...CAGAGCCAGACTTGGCTGCTGCCTGTGTGACACAGGGACACTGCAAGTTGATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496770.1
CDS-3UTR TCA 90 bp CACACCACTCAGGCTCTAAGGAAGGACATGAGGACCCTGGGTAACTTTCATGGAGACGTTCACTGGGGCTaGGGGACTGTCCGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: HTTQALRKDMRTLGNFHGDVHWG*GTVRLH
Trigger: GTGCAGGCGGACAGTCCCTCAGCCCCAGTGAACGTC...TCCATGAAAGTTACCCAGGGTCCTCATGTCCTTCCTTAGAGCCTGAGTGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR TCA 90 bp ATAAGAGGCTTCAGGAAAGTGCGCCAGAGAGAGGACAGTAAGCCAGAGGGTACACCTCACGCGGGGTCTTaGAGAGCACAGGCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: IRGFRKVRQREDSKPEGTPHAGS*RAQARW
Trigger: CCAGCGAGCCTGTGCTCTTCAAGACCCCGCGTGAGG...TGTACCCTCTGGCTTACTGTCCTCTCTCTGGCGCACTTTCCTGAAGCCTCTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR TCA 90 bp TTCAGGAAAGTGCGCCAGAGAGAGGACAGTAAGCCAGAGGGTACAAGGAGATGGGGGGCGGTCATTGGGTaGTGGCTTCTGGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: FRKVRQREDSKPEGTRRWGAVIG*WLLALW
Trigger: CCAGAGAGCCAGAAGCCATCACCCAATGACCGCCCC...CCATCTCCTTGTACCCTCTGGCTTACTGTCCTCTCTCTGGCGCACTTTCCTGAA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR GCA 90 bp CAACTTGCAGTGTCCCTGTGTCACACAGGCAGCAGCCAAGTCTGGCTCTGCCCAGAGTTGGCCTTGAGGTaGCTGACGGTGACGTTCACT +
Preference number: 4 (lower is better)
Translates to: QLAVSLCHTGSSQVWLCPELALR*LTVTFT
Trigger: AGTGAACGTCACCGTCAGGCACCTCAAGGCCAACTC...TGGGCAGAGCCAGACTTGGCTGCTGCCTGTGTGACACAGGGACACTGCAAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496770.1
CDS-3UTR GCA 90 bp GCCCGTGGGCCTGGGGACCAGCTGAGAAGAAAAATGGAATCCTTCTCCCTGCAGGAGGGCAATGACACCTaGCCACATGAACAGGACCAC +
Preference number: 4 (lower is better)
Translates to: ARGPGDQLRRKMESFSLQEGNDT*PHEQDH
Trigger: GTGGTCCTGTTCATGTGGGCAGGTGTCATTGCCCTC...CTGCAGGGAGAAGGATTCCATTTTTCTTCTCAGCTGGTCCCCAGGCCCACGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR GCA 90 bp CCCAGCCTTCAGCCTCACTCAACTGAATGGCCAAGACTGGGTCCTGGGCCCATGGAGGCTTCAGGAAAGTaGGCCAGAGAGAGGACAGTA +
Preference number: 4 (lower is better)
Translates to: PSLQPHSTEWPRLGPGPMEASGK*ARERTV
Trigger: TACTGTCCTCTCTCTGGCGCACTTTCCTGAAGCCTC...CATGGGCCCAGGACCCAGTCTTGGCCATTCAGTTGAGTGAGGCTGAAGGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR GCA 90 bp GAATGGCCAAGACTGGGTCCTGGGCCCATGGCCCCTGGCACCCAGTCTACCCCCAGAAAAGAGAAGCCCTaGCTGGATGTCTTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: EWPRLGPGPMAPGTQSTPRKEKP*LDVLSF
Trigger: AAAAGACAAGACATCCAGGCAGGGCTTCTCTTTTCT...GGGGGTAGACTGGGTGCCAGGGGCCATGGGCCCAGGACCCAGTCTTGGCCATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR GCA 90 bp AGGAGAGGCGAGGAGGCAGAAGGCTGTGTCTCATGCAGCTTTGCCTTTTCCAGACCTCCTCCCCACTGCTaGAGTTGTCCCTCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: RRGEEAEGCVSCSFAFSRPPPHC*SCPSPC
Trigger: ACAGGGAGAGGGACAACTGCAGCAGTGGGGAGGAGG...TCTGGAAAAGGCAAAGCTGCATGAGACACAGCCTTCTGCCTCCTCGCCTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR GCA 90 bp CCCATGCAGGCATCTGGCAGCCGTAACTCGTCAGTCCTAGGGAAGAGTCTACCTAAGGAGCCTTGGCCTTaGAGCCCCATTCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: PMQASGSRNSSVLGKSLPKEPWP*SPIQQG
Trigger: TCCCTGCTGAATGGGGCTGCAAGGCCAAGGCTCCTT...AGGTAGACTCTTCCCTAGGACTGACGAGTTACGGCTGCCAGATGCCTGCATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp ATCAACTTGCAGTGTCCCTGTGTCACACAGGCAGCAGCCAAGTCTGGCTCTGCCGTGGTGTTCACCTCCTaGATGAAGCGCAGCATCCGC +
Preference number: 4 (lower is better)
Translates to: INLQCPCVTQAAAKSGSAVVFTS*MKRSIR
Trigger: GCGGATGCTGCGCTTCATCCAGGAGGTGAACACCAC...GGCAGAGCCAGACTTGGCTGCTGCCTGTGTGACACAGGGACACTGCAAGTTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496770.1
CDS-3UTR CCA 90 bp GCCCGTGGGCCTGGGGACCAGCTGAGAAGAAAAATGGAATCCTTCTCCCTGCAGCCTGTCCGCAGCTGTTaGTTCCTCCCCATCTCTTTC +
Preference number: 4 (lower is better)
Translates to: ARGPGDQLRRKMESFSLQPVRSC*FLPISF
Trigger: GAAAGAGATGGGGAGGAACCAACAGCTGCGGACAGG...CTGCAGGGAGAAGGATTCCATTTTTCTTCTCAGCTGGTCCCCAGGCCCACGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp AGGAGAGGCGAGGAGGCAGAAGGCTGTGTCTCATGCAGCTTTGCCTTTTCCAGAAGCCATGATCCTGCCTaGCAGGCAGCCCCACAGCTT +
Preference number: 4 (lower is better)
Translates to: RRGEEAEGCVSCSFAFSRSHDPA*QAAPQL
Trigger: AAGCTGTGGGGCTGCCTGCCAGGCAGGATCATGGCT...TCTGGAAAAGGCAAAGCTGCATGAGACACAGCCTTCTGCCTCCTCGCCTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp GGCGAGGAGGCAGAAGGCTGTGTCTCATGCAGCTTTGCCTTTTCCAGAATGGGGTTGGGTGATGGCTTCTaGCTCTCTGGCTTGGGGACC +
Preference number: 4 (lower is better)
Translates to: GEEAEGCVSCSFAFSRMGLGDGF*LSGLGT
Trigger: GGTCCCCAAGCCAGAGAGCCAGAAGCCATCACCCAA...CCCCATTCTGGAAAAGGCAAAGCTGCATGAGACACAGCCTTCTGCCTCCTCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR TCA 90 bp GCAAAAGGAGAGGATCCAAAATCAACTTGCAGTGTCCCTGTGTCACACAGGCAGCCTCACGCGGGGTCTTaGAGAGCACAGGCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: AKGEDPKSTCSVPVSHRQPHAGS*RAQARW
Trigger: CCAGCGAGCCTGTGCTCTTCAAGACCCCGCGTGAGG...CTGCCTGTGTGACACAGGGACACTGCAAGTTGATTTTGGATCCTCTCCTTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496770.1
CDS-3UTR TCA 90 bp GGAGAGGATCCAAAATCAACTTGCAGTGTCCCTGTGTCACACAGGCAGCAGCCAACAGGACCACGACGATaGTCAGCACCTCGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: GEDPKSTCSVPVSHRQQPTGPRR*SAPRLS
Trigger: GGACAGGCGAGGTGCTGATCATCGTCGTGGTCCTGT...TGGCTGCTGCCTGTGTGACACAGGGACACTGCAAGTTGATTTTGGATCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496770.1
CDS-3UTR TCA 90 bp TTCAGGAAAGTGCGCCAGAGAGAGGACAGTAAGCCAGAGGGTACAAGGAGATGGCAGCAGTCATCCCTCTaGGTGCAGCCTCAGCCACTG +
Preference number: 4 (lower is better)
Translates to: FRKVRQREDSKPEGTRRWQQSSL*VQPQPL
Trigger: CAGTGGCTGAGGCTGCACTCAGAGGGATGACTGCTG...CCATCTCCTTGTACCCTCTGGCTTACTGTCCTCTCTCTGGCGCACTTTCCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR TCA 90 bp CTGGCACCCTGCAAAAGGAGAGGATCCAAAATCAACTTGCAGTGTCCCTGTGTCGGGATTACCAGAGCATaGGGCACAGGGTGGCCCACC +
Preference number: 4 (lower is better)
Translates to: LAPCKRRGSKINLQCPCVGITRA*GTGWPT
Trigger: GGTGGGCCACCCTGTGCCTCATGCTCTGGTAATCCC...GACACAGGGACACTGCAAGTTGATTTTGGATCCTCTCCTTTTGCAGGGTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496770.1
CDS-3UTR GCA 90 bp CCCATGCAGGCATCTGGCAGCCGTAACTCGTCAGTCCTAGGGAAGAGTCTACCTGAGTTGGCCTTGAGGTaGCTGACGGTGACGTTCACT +
Preference number: 4 (lower is better)
Translates to: PMQASGSRNSSVLGKSLPELALR*LTVTFT
Trigger: AGTGAACGTCACCGTCAGGCACCTCAAGGCCAACTC...AGGTAGACTCTTCCCTAGGACTGACGAGTTACGGCTGCCAGATGCCTGCATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR GCA 90 bp GCCCGTGGGCCTGGGGACCAGCTGAGAAGAAAAATGGAATCCTTCTCCCTGCAGCCTGGTGCTCTGGTGTaGTGGTTTCTGATGCACTCT +
Preference number: 4 (lower is better)
Translates to: ARGPGDQLRRKMESFSLQPGALV*WFLMHS
Trigger: AGAGTGCATCAGAAACCAGCACACCAGAGCACCAGG...CTGCAGGGAGAAGGATTCCATTTTTCTTCTCAGCTGGTCCCCAGGCCCACGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR GCA 90 bp TCTCCCCTAAGGAGCCTTGGCCTTGCAGCCCCATTCAGCAGGGATGGAAGTCACTGGAATCCTTCTCCCTaGAGACAGGCAGTCACGCTT +
Preference number: 4 (lower is better)
Translates to: SPLRSLGLAAPFSRDGSHWNPSP*RQAVTL
Trigger: AAGCGTGACTGCCTGTCTGCAGGGAGAAGGATTCCA...GTGACTTCCATCCCTGCTGAATGGGGCTGCAAGGCCAAGGCTCCTTAGGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR GCA 90 bp CTAAGGAAGGACATGAGGACCCTGGGTAACTTTCATGGAACCCTGGATGAGATGTTGTCCCTCTCCCTGTaGCCGTGGGCCTGGGGACCA +
Preference number: 4 (lower is better)
Translates to: LRKDMRTLGNFHGTLDEMLSLSL*PWAWGP
Trigger: TGGTCCCCAGGCCCACGGGCACAGGGAGAGGGACAA...CATCTCATCCAGGGTTCCATGAAAGTTACCCAGGGTCCTCATGTCCTTCCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR GCA 90 bp CCGTGGGCCTGGGGACCAGCTGAGAAGAAAAATGGAATCCTTCTCCCTGCAGACGTCTCTCCTCCCCAGTaGTGTCACACTTGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: PWAWGPAEKKNGILLPADVSPPQ*CHTWAK
Trigger: CTTTGCCCAAGTGTGACAGCACTGGGGAGGAGAGAC...GTCTGCAGGGAGAAGGATTCCATTTTTCTTCTCAGCTGGTCCCCAGGCCCACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR GCA 90 bp AGGAGAGGCGAGGAGGCAGAAGGCTGTGTCTCATGCAGCTTTGCCTTTTCCAGAATGAGTGGAGCCTCATaGCCTCCCATGAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: RRGEEAEGCVSCSFAFSRMSGAS*PPMRKP
Trigger: GGGCTTCCTCATGGGAGGGCATGAGGCTCCACTCAT...TCTGGAAAAGGCAAAGCTGCATGAGACACAGCCTTCTGCCTCCTCGCCTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp GGCGAGGAGGCAGAAGGCTGTGTCTCATGCAGCTTTGCCTTTTCCAGAATGGGGGGCCCTGAATGGAGATaGCCTGCACGTGGACTATGT +
Preference number: 4 (lower is better)
Translates to: GEEAEGCVSCSFAFSRMGGPEWR*PARGLC
Trigger: ACATAGTCCACGTGCAGGCCATCTCCATTCAGGGCC...CCCCATTCTGGAAAAGGCAAAGCTGCATGAGACACAGCCTTCTGCCTCCTCGCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp GGAGAGGATCCAAAATCAACTTGCAGTGTCCCTGTGTCACACAGGCAGCAGCCAGGCTCTGGCCCTGAATaGAGATGGCCTGCACGTGGA +
Preference number: 4 (lower is better)
Translates to: GEDPKSTCSVPVSHRQQPGSGPE*RWPARG
Trigger: TCCACGTGCAGGCCATCTCCATTCAGGGCCAGAGCC...TGGCTGCTGCCTGTGTGACACAGGGACACTGCAAGTTGATTTTGGATCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496770.1
CDS-3UTR CCA 90 bp GTGGTTCTCCCACACCCATCCTTGACCACCAATGGAAGATGCAGATGTCCACCTGGCTCTGGCCCTGAATaGAGATGGCCTGCACGTGGA +
Preference number: 4 (lower is better)
Translates to: VVLPHPSLTTNGRCRCPPGSGPE*RWPARG
Trigger: TCCACGTGCAGGCCATCTCCATTCAGGGCCAGAGCC...AGGTGGACATCTGCATCTTCCATTGGTGGTCAAGGATGGGTGTGGGAGAACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp ATAAGAGGCTTCAGGAAAGTGCGCCAGAGAGAGGACAGTAAGCCAGAGGGTACACACAGGCTCGCTGGCTaGGCTCTGGCCCTGAATGGA +
Preference number: 4 (lower is better)
Translates to: IRGFRKVRQREDSKPEGTHRLAG*ALALNG
Trigger: TCCATTCAGGGCCAGAGCCCAGCCAGCGAGCCTGTG...TGTACCCTCTGGCTTACTGTCCTCTCTCTGGCGCACTTTCCTGAAGCCTCTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp AAAATCAACTTGCAGTGTCCCTGTGTCACACAGGCAGCAGCCAAGTCTGGCTCTAGAGCACAGGCTCGCTaGCTGGGCTCTGGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: KINLQCPCVTQAAAKSGSRAQAR*LGSGPE
Trigger: TTCAGGGCCAGAGCCCAGCCAGCGAGCCTGTGCTCT...AGAGCCAGACTTGGCTGCTGCCTGTGTGACACAGGGACACTGCAAGTTGATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496770.1
CDS-3UTR CCA 90 bp TTCAGGAAAGTGCGCCAGAGAGAGGACAGTAAGCCAGAGGGTACAAGGAGATGGCCTGTCCGTGGTGAATaGCTCAGGCCTGCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: FRKVRQREDSKPEGTRRWPVRGE*LRPAFQ
Trigger: CTGGAAGGCAGGCCTGAGCCATTCACCACGGACAGG...CCATCTCCTTGTACCCTCTGGCTTACTGTCCTCTCTCTGGCGCACTTTCCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp CCCAGCCTTCAGCCTCACTCAACTGAATGGCCAAGACTGGGTCCTGGGCCCATGTCACAAGACAATGAGTaGAGCCTCATGCCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: PSLQPHSTEWPRLGPGPMSQDNE*SLMPSH
Trigger: ATGGGAGGGCATGAGGCTCCACTCATTGTCTTGTGA...CATGGGCCCAGGACCCAGTCTTGGCCATTCAGTTGAGTGAGGCTGAAGGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR TCA 90 bp AAGACAATGAGTGGAGCCTCATGCCCTCCCATGAGGAAGCCCTTAGTATTGCTGACAGGACCACGACGATaGTCAGCACCTCGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: KTMSGASCPPMRKPLVLLTGPRR*SAPRLS
Trigger: GGACAGGCGAGGTGCTGATCATCGTCGTGGTCCTGT...CAGCAATACTAAGGGCTTCCTCATGGGAGGGCATGAGGCTCCACTCATTGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR TCA 90 bp GCCCGTGGGCCTGGGGACCAGCTGAGAAGAAAAATGGAATCCTTCTCCCTGCAGGCAGTCACGCTTCAATaGTGTTCACTGAGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: ARGPGDQLRRKMESFSLQAVTLQ*CSLRAC
Trigger: ACAAGCCCTCAGTGAACATCATTGAAGCGTGACTGC...CTGCAGGGAGAAGGATTCCATTTTTCTTCTCAGCTGGTCCCCAGGCCCACGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR TCA 90 bp CTGGCACCCTGCAAAAGGAGAGGATCCAAAATCAACTTGCAGTGTCCCTGTGTCGACGTTCACTGGGGCTaGGGGACTTGTCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: LAPCKRRGSKINLQCPCVDVHWG*GTCPGR
Trigger: TCTCCCAGGACAAGTCCCTCAGCCCCAGTGAACGTC...GACACAGGGACACTGCAAGTTGATTTTGGATCCTCTCCTTTTGCAGGGTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000496770.1
CDS-3UTR GCA 90 bp CTCTTCCTGTCCGTGGTGAATGGCTCAGGCCTGCCTTCCAGCAGCTTCTACTCCACCACCAATGGAAGATaGAGATGTCCACCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LFLSVVNGSGLPSSSFYSTTNGR*RCPPLP
Trigger: GGGAAGAGGTGGACATCTGCATCTTCCATTGGTGGT...GGAGTAGAAGCTGCTGGAAGGCAGGCCTGAGCCATTCACCACGGACAGGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR GCA 90 bp CTGGCACCCTGCAAAAGGAGAGGATCCAAAATCAACTTGCAGTGTCCCTGTGTCAGCCAAGTCTGGCTCTaGCCAGCTGTCGCCATGCCA +
Preference number: 4 (lower is better)
Translates to: LAPCKRRGSKINLQCPCVSQVWL*PAVAMP
Trigger: TGGCATGGCGACAGCTGGGCAGAGCCAGACTTGGCT...GACACAGGGACACTGCAAGTTGATTTTGGATCCTCTCCTTTTGCAGGGTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496770.1
CDS-3UTR CCA 90 bp TGCCCGTGGGCCTGGGGACCAGCTGAGAAGAAAAATGGAATCCTTCTCCCTGCAGAGATGGCCTGCACGTaGACTATGTACTCCGTATCC +
Preference number: 4 (lower is better)
Translates to: CPWAWGPAEKKNGILLPAEMACT*TMYSVS
Trigger: GGATACGGAGTACATAGTCCACGTGCAGGCCATCTC...TGCAGGGAGAAGGATTCCATTTTTCTTCTCAGCTGGTCCCCAGGCCCACGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp ATAAGAGGCTTCAGGAAAGTGCGCCAGAGAGAGGACAGTAAGCCAGAGGGTACAGGCTCTGGCCCTGAATaGAGATGGCCTGCACGTGGA +
Preference number: 4 (lower is better)
Translates to: IRGFRKVRQREDSKPEGTGSGPE*RWPARG
Trigger: TCCACGTGCAGGCCATCTCCATTCAGGGCCAGAGCC...TGTACCCTCTGGCTTACTGTCCTCTCTCTGGCGCACTTTCCTGAAGCCTCTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp ATAAGGGTCAAAGAAGATAGAGGATGCAGGCAACCAGCTCAGTCTTCGGGGGAACACAGGCTCGCTGGCTaGGCTCTGGCCCTGAATGGA +
Preference number: 4 (lower is better)
Translates to: IRVKEDRGCRQPAQSSGEHRLAG*ALALNG
Trigger: TCCATTCAGGGCCAGAGCCCAGCCAGCGAGCCTGTG...TTCCCCCGAAGACTGAGCTGGTTGCCTGCATCCTCTATCTTCTTTGACCCTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp AAAGAAGATAGAGGATGCAGGCAACCAGCTCAGTCTTCGGGGGAATTTCTCTGCAGAGCACAGGCTCGCTaGCTGGGCTCTGGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: KEDRGCRQPAQSSGEFLCRAQAR*LGSGPE
Trigger: TTCAGGGCCAGAGCCCAGCCAGCGAGCCTGTGCTCT...GCAGAGAAATTCCCCCGAAGACTGAGCTGGTTGCCTGCATCCTCTATCTTCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp TCTCCCCTAAGGAGCCTTGGCCTTGCAGCCCCATTCAGCAGGGATGGAAGTCACGCCTTCTTGCAAGGCTaGAAACAGGACAGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: SPLRSLGLAAPFSRDGSHAFLQG*KQDRRR
Trigger: CCTTCTTCTGTCCTGTTTCCAGCCTTGCAAGAAGGC...GTGACTTCCATCCCTGCTGAATGGGGCTGCAAGGCCAAGGCTCCTTAGGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp CAGAACCATGAGATCCTCTCACATTCTCTACTGTCTGTCTTCTTAGCTGCTGAGCTCTCCCTGTGCCCGTaGGCCTGGGGACCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: QNHEILSHSLLSVFLAAELSLCP*AWGPAE
Trigger: CTCAGCTGGTCCCCAGGCCCACGGGCACAGGGAGAG...CTCAGCAGCTAAGAAGACAGACAGTAGAGAATGTGAGAGGATCTCATGGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp CCCAGCCTTCAGCCTCACTCAACTGAATGGCCAAGACTGGGTCCTGGGCCCATGGAACCCTGGATGAGATaGCAAGATATGAAGACCCCA +
Preference number: 4 (lower is better)
Translates to: PSLQPHSTEWPRLGPGPMEPWMR*QDMKTP
Trigger: TGGGGTCTTCATATCTTGCCATCTCATCCAGGGTTC...CATGGGCCCAGGACCCAGTCTTGGCCATTCAGTTGAGTGAGGCTGAAGGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp CTGCAAAAGGAGAGGATCCAAAATCAACTTGCAGTGTCCCTGTGTCACACAGGCTGGGAGAGCCTCAGCTaGGACCTCGACCCGTTTGGG +
Preference number: 4 (lower is better)
Translates to: LQKERIQNQLAVSLCHTGWESLS*DLDPFG
Trigger: CCCAAACGGGTCGAGGTCCCAGCTGAGGCTCTCCCA...GCCTGTGTGACACAGGGACACTGCAAGTTGATTTTGGATCCTCTCCTTTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496770.1
CDS-3UTR CCA 90 bp GGAGAGGATCCAAAATCAACTTGCAGTGTCCCTGTGTCACACAGGCAGCAGCCAATCACCACTGGCCCCTaGCACCCTGCAAAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: GEDPKSTCSVPVSHRQQPITTGP*HPAKGE
Trigger: CTCTCCTTTTGCAGGGTGCCAGGGGCCAGTGGTGAT...TGGCTGCTGCCTGTGTGACACAGGGACACTGCAAGTTGATTTTGGATCCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496770.1
CDS-3UTR TCA 90 bp CAGAACCATGAGATCCTCTCACATTCTCTACTGTCTGTCTTCTTAGCTGCTGAGGCTGGGCTCTGGCCCTaGATGGAGATGGCCTGCACG +
Preference number: 4 (lower is better)
Translates to: QNHEILSHSLLSVFLAAEAGLWP*MEMACT
Trigger: CGTGCAGGCCATCTCCATTCAGGGCCAGAGCCCAGC...CTCAGCAGCTAAGAAGACAGACAGTAGAGAATGTGAGAGGATCTCATGGTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR TCA 90 bp AAGGACATGAGGACCCTGGGTAACTTTCATGGAACCCTGGATGAGATGGCAAGAACAGGACCACGACGATaGTCAGCACCTCGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: KDMRTLGNFHGTLDEMARTGPRR*SAPRLS
Trigger: GGACAGGCGAGGTGCTGATCATCGTCGTGGTCCTGT...TCTTGCCATCTCATCCAGGGTTCCATGAAAGTTACCCAGGGTCCTCATGTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR TCA 90 bp TCTCCCCTAAGGAGCCTTGGCCTTGCAGCCCCATTCAGCAGGGATGGAAGTCACCCAGAATGCCAGCTGTaGTGTGACTTTTCAGTTGTC +
Preference number: 4 (lower is better)
Translates to: SPLRSLGLAAPFSRDGSHPECQL*CDFSVV
Trigger: GACAACTGAAAAGTCACATCACAGCTGGCATTCTGG...GTGACTTCCATCCCTGCTGAATGGGGCTGCAAGGCCAAGGCTCCTTAGGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR TCA 90 bp AGGAGAGGCGAGGAGGCAGAAGGCTGTGTCTCATGCAGCTTTGCCTTTTCCAGATCCCACACCCATCCTTaGCCACCAATGGAAGATGCA +
Preference number: 4 (lower is better)
Translates to: RRGEEAEGCVSCSFAFSRSHTHP*PPMEDA
Trigger: TGCATCTTCCATTGGTGGTCAAGGATGGGTGTGGGA...TCTGGAAAAGGCAAAGCTGCATGAGACACAGCCTTCTGCCTCCTCGCCTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR TCA 90 bp GAGTCAGTCCTTGTGCTTGTCATCTCCCAGGGCTTTGTGCATTTTCTCAAAGAGGGGGCGGTCATTGGGTaGTGGCTTCTGGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: ESVLVLVISQGFVHFLKEGAVIG*WLLALW
Trigger: CCAGAGAGCCAGAAGCCATCACCCAATGACCGCCCC...CTCTTTGAGAAAATGCACAAAGCCCTGGGAGATGACAAGCACAAGGACTGACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR GCA 90 bp TTCAGGAAAGTGCGCCAGAGAGAGGACAGTAAGCCAGAGGGTACAAGGAGATGGATCCCAGCTCACCACTaGAGAGTTGGCCTTGAGGTG +
Preference number: 4 (lower is better)
Translates to: FRKVRQREDSKPEGTRRWIPAHH*RVGLEV
Trigger: CACCTCAAGGCCAACTCTGCAGTGGTGAGCTGGGAT...CCATCTCCTTGTACCCTCTGGCTTACTGTCCTCTCTCTGGCGCACTTTCCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR GCA 90 bp TCTCCCCTAAGGAGCCTTGGCCTTGCAGCCCCATTCAGCAGGGATGGAAGTCACGAAGGCTGTGTCTCATaGAGCTTTGCCTTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: SPLRSLGLAAPFSRDGSHEGCVS*SFAFSR
Trigger: TCTGGAAAAGGCAAAGCTGCATGAGACACAGCCTTC...GTGACTTCCATCCCTGCTGAATGGGGCTGCAAGGCCAAGGCTCCTTAGGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR GCA 90 bp CACACCACTCAGGCTCTAAGGAAGGACATGAGGACCCTGGGTAACTTTCATGGAGTCCACCTCTTCCCATaGAGGCATCTGGCAGCCGTA +
Preference number: 4 (lower is better)
Translates to: HTTQALRKDMRTLGNFHGVHLFP*RHLAAV
Trigger: TACGGCTGCCAGATGCCTGCATGGGAAGAGGTGGAC...TCCATGAAAGTTACCCAGGGTCCTCATGTCCTTCCTTAGAGCCTGAGTGGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR GCA 90 bp CCCAGCCTTCAGCCTCACTCAACTGAATGGCCAAGACTGGGTCCTGGGCCCATGAGTATTGCTGACATCTaGCCTTTATCCTGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: PSLQPHSTEWPRLGPGPMSIADI*PLSCLS
Trigger: GGAGAGACAGGATAAAGGGCAGATGTCAGCAATACT...CATGGGCCCAGGACCCAGTCTTGGCCATTCAGTTGAGTGAGGCTGAAGGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp ACAATGAGTGGAGCCTCATGCCCTCCCATGAGGAAGCCCTTAGTATTGCTGACAGTGGTGTTCACCTCCTaGATGAAGCGCAGCATCCGC +
Preference number: 4 (lower is better)
Translates to: TMSGASCPPMRKPLVLLTVVFTS*MKRSIR
Trigger: GCGGATGCTGCGCTTCATCCAGGAGGTGAACACCAC...TGTCAGCAATACTAAGGGCTTCCTCATGGGAGGGCATGAGGCTCCACTCATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373471.9
CDS-3UTR CCA 90 bp AAAGAAGATAGAGGATGCAGGCAACCAGCTCAGTCTTCGGGGGAATTTCTCTGCCCTGTCCGTGGTGAATaGCTCAGGCCTGCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: KEDRGCRQPAQSSGEFLCPVRGE*LRPAFQ
Trigger: CTGGAAGGCAGGCCTGAGCCATTCACCACGGACAGG...GCAGAGAAATTCCCCCGAAGACTGAGCTGGTTGCCTGCATCCTCTATCTTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp TTCAGGAAAGTGCGCCAGAGAGAGGACAGTAAGCCAGAGGGTACAAGGAGATGGTGGCTTCTGGCTCTCTaGCTTGGGGACCAATGCTCT +
Preference number: 4 (lower is better)
Translates to: FRKVRQREDSKPEGTRRWWLLAL*LGDQCS
Trigger: AGAGCATTGGTCCCCAAGCCAGAGAGCCAGAAGCCA...CCATCTCCTTGTACCCTCTGGCTTACTGTCCTCTCTCTGGCGCACTTTCCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp ATAAGAGGCTTCAGGAAAGTGCGCCAGAGAGAGGACAGTAAGCCAGAGGGTACATCCCCTAAGGAGCCTTaGCCTTGCAGCCCCATTCAG +
Preference number: 4 (lower is better)
Translates to: IRGFRKVRQREDSKPEGTSPKEP*PCSPIQ
Trigger: CTGAATGGGGCTGCAAGGCCAAGGCTCCTTAGGGGA...TGTACCCTCTGGCTTACTGTCCTCTCTCTGGCGCACTTTCCTGAAGCCTCTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp CACACCACTCAGGCTCTAAGGAAGGACATGAGGACCCTGGGTAACTTTCATGGATCCCCTAAGGAGCCTTaGCCTTGCAGCCCCATTCAG +
Preference number: 4 (lower is better)
Translates to: HTTQALRKDMRTLGNFHGSPKEP*PCSPIQ
Trigger: CTGAATGGGGCTGCAAGGCCAAGGCTCCTTAGGGGA...TCCATGAAAGTTACCCAGGGTCCTCATGTCCTTCCTTAGAGCCTGAGTGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR TCA 90 bp CCCATGCAGGCATCTGGCAGCCGTAACTCGTCAGTCCTAGGGAAGAGTCTACCTAGATGGCAAATCCGATaGCAACCTCATCCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: PMQASGSRNSSVLGKSLPRWQIR*QPHPPE
Trigger: TTCTGGAGGATGAGGTTGTCATCGGATTTGCCATCT...AGGTAGACTCTTCCCTAGGACTGACGAGTTACGGCTGCCAGATGCCTGCATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR GCA 90 bp AGAGGATCCAAAATCAACTTGCAGTGTCCCTGTGTCACACAGGCAGCAGCCAAGGAGGGCAATGACACCTaGCCACATGAACAGGACCAC +
Preference number: 4 (lower is better)
Translates to: RGSKINLQCPCVTQAAAKEGNDT*PHEQDH
Trigger: GTGGTCCTGTTCATGTGGGCAGGTGTCATTGCCCTC...CTTGGCTGCTGCCTGTGTGACACAGGGACACTGCAAGTTGATTTTGGATCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496770.1
CDS-3UTR GCA 90 bp AAAGAAGATAGAGGATGCAGGCAACCAGCTCAGTCTTCGGGGGAATTTCTCTGCATGAGTGGAGCCTCATaGCCTCCCATGAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: KEDRGCRQPAQSSGEFLCMSGAS*PPMRKP
Trigger: GGGCTTCCTCATGGGAGGGCATGAGGCTCCACTCAT...GCAGAGAAATTCCCCCGAAGACTGAGCTGGTTGCCTGCATCCTCTATCTTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR GCA 90 bp AACTTTCATGGAACCCTGGATGAGATGGCAAGATATGAAGACCCCAGAGGCCAGAAGGAGCCTTGGCCTTaGAGCCCCATTCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: NFHGTLDEMARYEDPRGQKEPWP*SPIQQG
Trigger: TCCCTGCTGAATGGGGCTGCAAGGCCAAGGCTCCTT...CTGGCCTCTGGGGTCTTCATATCTTGCCATCTCATCCAGGGTTCCATGAAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp CACACCACTCAGGCTCTAAGGAAGGACATGAGGACCCTGGGTAACTTTCATGGAGGCCCTGAATGGAGATaGCCTGCACGTGGACTATGT +
Preference number: 4 (lower is better)
Translates to: HTTQALRKDMRTLGNFHGGPEWR*PARGLC
Trigger: ACATAGTCCACGTGCAGGCCATCTCCATTCAGGGCC...TCCATGAAAGTTACCCAGGGTCCTCATGTCCTTCCTTAGAGCCTGAGTGGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp GGCGAGGAGGCAGAAGGCTGTGTCTCATGCAGCTTTGCCTTTTCCAGAATGGGGCCTCATCTTTGTTCTTaGAGGCCATCTTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: GEEAEGCVSCSFAFSRMGPHLCS*RPSSQP
Trigger: AGGCTGAGAAGATGGCCTCCAAGAACAAAGATGAGG...CCCCATTCTGGAAAAGGCAAAGCTGCATGAGACACAGCCTTCTGCCTCCTCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp GAGAGGATCCAAAATCAACTTGCAGTGTCCCTGTGTCACACAGGCAGCAGCCAACCTGTCCGCAGCTGTTaGTTCCTCCCCATCTCTTTC +
Preference number: 4 (lower is better)
Translates to: ERIQNQLAVSLCHTGSSQPVRSC*FLPISF
Trigger: GAAAGAGATGGGGAGGAACCAACAGCTGCGGACAGG...TTGGCTGCTGCCTGTGTGACACAGGGACACTGCAAGTTGATTTTGGATCCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496770.1
CDS-3UTR CCA 90 bp CAGAACCATGAGATCCTCTCACATTCTCTACTGTCTGTCTTCTTAGCTGCTGAGCTGAATGGCCAAGACTaGGTCCTGGGCCCATGGCCC +
Preference number: 4 (lower is better)
Translates to: QNHEILSHSLLSVFLAAELNGQD*VLGPWP
Trigger: GGGCCATGGGCCCAGGACCCAGTCTTGGCCATTCAG...CTCAGCAGCTAAGAAGACAGACAGTAGAGAATGTGAGAGGATCTCATGGTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp GGCGAGGAGGCAGAAGGCTGTGTCTCATGCAGCTTTGCCTTTTCCAGAATGGGGGAACCCTGGATGAGATaGCAAGATATGAAGACCCCA +
Preference number: 4 (lower is better)
Translates to: GEEAEGCVSCSFAFSRMGEPWMR*QDMKTP
Trigger: TGGGGTCTTCATATCTTGCCATCTCATCCAGGGTTC...CCCCATTCTGGAAAAGGCAAAGCTGCATGAGACACAGCCTTCTGCCTCCTCGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp CCGTGGGCCTGGGGACCAGCTGAGAAGAAAAATGGAATCCTTCTCCCTGCAGACATCCTTGACCACCAATaGAAGATGCAGATGTCCACC +
Preference number: 4 (lower is better)
Translates to: PWAWGPAEKKNGILLPADILDHQ*KMQMST
Trigger: GGTGGACATCTGCATCTTCCATTGGTGGTCAAGGAT...GTCTGCAGGGAGAAGGATTCCATTTTTCTTCTCAGCTGGTCCCCAGGCCCACGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp GGCGAGGAGGCAGAAGGCTGTGTCTCATGCAGCTTTGCCTTTTCCAGAATGGGGATCCTTGACCACCAATaGAAGATGCAGATGTCCACC +
Preference number: 4 (lower is better)
Translates to: GEEAEGCVSCSFAFSRMGILDHQ*KMQMST
Trigger: GGTGGACATCTGCATCTTCCATTGGTGGTCAAGGAT...CCCCATTCTGGAAAAGGCAAAGCTGCATGAGACACAGCCTTCTGCCTCCTCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp ACAATGAGTGGAGCCTCATGCCCTCCCATGAGGAAGCCCTTAGTATTGCTGACATGGCTTCTGGCTCTCTaGCTTGGGGACCAATGCTCT +
Preference number: 4 (lower is better)
Translates to: TMSGASCPPMRKPLVLLTWLLAL*LGDQCS
Trigger: AGAGCATTGGTCCCCAAGCCAGAGAGCCAGAAGCCA...TGTCAGCAATACTAAGGGCTTCCTCATGGGAGGGCATGAGGCTCCACTCATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp CCCATGCAGGCATCTGGCAGCCGTAACTCGTCAGTCCTAGGGAAGAGTCTACCTCCCATTCAGCAGGGATaGAAGTCACAAGACAATGAG +
Preference number: 4 (lower is better)
Translates to: PMQASGSRNSSVLGKSLPPIQQG*KSQDNE
Trigger: CTCATTGTCTTGTGACTTCCATCCCTGCTGAATGGG...AGGTAGACTCTTCCCTAGGACTGACGAGTTACGGCTGCCAGATGCCTGCATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp CAAAATCAACTTGCAGTGTCCCTGTGTCACACAGGCAGCAGCCAAGTCTGGCTCTCTTCAAATCACCACTaGCCCCTGGCACCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: QNQLAVSLCHTGSSQVWLSSNHH*PLAPCK
Trigger: TTTGCAGGGTGCCAGGGGCCAGTGGTGATTTGAAGA...GAGCCAGACTTGGCTGCTGCCTGTGTGACACAGGGACACTGCAAGTTGATTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496770.1
CDS-3UTR TCA 90 bp AACTTTCATGGAACCCTGGATGAGATGGCAAGATATGAAGACCCCAGAGGCCAGTGTTCACCTCCTGGATaGAGCGCAGCATCCGCACAT +
Preference number: 4 (lower is better)
Translates to: NFHGTLDEMARYEDPRGQCSPPG*SAASAH
Trigger: ATGTGCGGATGCTGCGCTTCATCCAGGAGGTGAACA...CTGGCCTCTGGGGTCTTCATATCTTGCCATCTCATCCAGGGTTCCATGAAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373471.9
CDS-3UTR TCA 90 bp GTGGTTCTCCCACACCCATCCTTGACCACCAATGGAAGATGCAGATGTCCACCTGCAGTCACGCTTCAATaGTGTTCACTGAGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: VVLPHPSLTTNGRCRCPPAVTLQ*CSLRAC
Trigger: ACAAGCCCTCAGTGAACATCATTGAAGCGTGACTGC...AGGTGGACATCTGCATCTTCCATTGGTGGTCAAGGATGGGTGTGGGAGAACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR TCA 90 bp AAGACAATGAGTGGAGCCTCATGCCCTCCCATGAGGAAGCCCTTAGTATTGCTGGGCCTGGGGACCAGCTaGGAAGAAAAATGGAATCCT +
Preference number: 4 (lower is better)
Translates to: KTMSGASCPPMRKPLVLLGLGTS*EEKWNP
Trigger: AGGATTCCATTTTTCTTCTCAGCTGGTCCCCAGGCC...CAGCAATACTAAGGGCTTCCTCATGGGAGGGCATGAGGCTCCACTCATTGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR GCA 90 bp CCCTGCAAAAGGAGAGGATCCAAAATCAACTTGCAGTGTCCCTGTGTCACACAGATCCCAGCTCACCACTaGAGAGTTGGCCTTGAGGTG +
Preference number: 4 (lower is better)
Translates to: PCKRRGSKINLQCPCVTQIPAHH*RVGLEV
Trigger: CACCTCAAGGCCAACTCTGCAGTGGTGAGCTGGGAT...CTGTGTGACACAGGGACACTGCAAGTTGATTTTGGATCCTCTCCTTTTGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496770.1
CDS-3UTR GCA 90 bp CTAAGGAAGGACATGAGGACCCTGGGTAACTTTCATGGAACCCTGGATGAGATGGAGGGCAATGACACCTaGCCACATGAACAGGACCAC +
Preference number: 4 (lower is better)
Translates to: LRKDMRTLGNFHGTLDEMEGNDT*PHEQDH
Trigger: GTGGTCCTGTTCATGTGGGCAGGTGTCATTGCCCTC...CATCTCATCCAGGGTTCCATGAAAGTTACCCAGGGTCCTCATGTCCTTCCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR GCA 90 bp GGATCCAAAATCAACTTGCAGTGTCCCTGTGTCACACAGGCAGCAGCCAAGTCTCCTGGTGCTCTGGTGTaGTGGTTTCTGATGCACTCT +
Preference number: 4 (lower is better)
Translates to: GSKINLQCPCVTQAAAKSPGALV*WFLMHS
Trigger: AGAGTGCATCAGAAACCAGCACACCAGAGCACCAGG...AGACTTGGCTGCTGCCTGTGTGACACAGGGACACTGCAAGTTGATTTTGGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496770.1
CDS-3UTR GCA 90 bp ATAAGGGTCAAAGAAGATAGAGGATGCAGGCAACCAGCTCAGTCTTCGGGGGAAGTCTCTCCTCCCCAGTaGTGTCACACTTGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: IRVKEDRGCRQPAQSSGEVSPPQ*CHTWAK
Trigger: CTTTGCCCAAGTGTGACAGCACTGGGGAGGAGAGAC...TTCCCCCGAAGACTGAGCTGGTTGCCTGCATCCTCTATCTTCTTTGACCCTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR GCA 90 bp CTGCAAAAGGAGAGGATCCAAAATCAACTTGCAGTGTCCCTGTGTCACACAGGCTGGCCCCTGGCACCCTaGAAAAGGAGAGGATCCAAA +
Preference number: 4 (lower is better)
Translates to: LQKERIQNQLAVSLCHTGWPLAP*KRRGSK
Trigger: TTTGGATCCTCTCCTTTTGCAGGGTGCCAGGGGCCA...GCCTGTGTGACACAGGGACACTGCAAGTTGATTTTGGATCCTCTCCTTTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000496770.1
CDS-3UTR CCA 90 bp CCTGGCACCCTGCAAAAGGAGAGGATCCAAAATCAACTTGCAGTGTCCCTGTGTGAGATGGCCTGCACGTaGACTATGTACTCCGTATCC +
Preference number: 4 (lower is better)
Translates to: PGTLQKERIQNQLAVSLCEMACT*TMYSVS
Trigger: GGATACGGAGTACATAGTCCACGTGCAGGCCATCTC...ACACAGGGACACTGCAAGTTGATTTTGGATCCTCTCCTTTTGCAGGGTGCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496770.1
CDS-3UTR CCA 90 bp CACACCACTCAGGCTCTAAGGAAGGACATGAGGACCCTGGGTAACTTTCATGGAGAGATGGCCTGCACGTaGACTATGTACTCCGTATCC +
Preference number: 4 (lower is better)
Translates to: HTTQALRKDMRTLGNFHGEMACT*TMYSVS
Trigger: GGATACGGAGTACATAGTCCACGTGCAGGCCATCTC...TCCATGAAAGTTACCCAGGGTCCTCATGTCCTTCCTTAGAGCCTGAGTGGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp CTGCAAAAGGAGAGGATCCAAAATCAACTTGCAGTGTCCCTGTGTCACACAGGCGGCCCTGAATGGAGATaGCCTGCACGTGGACTATGT +
Preference number: 4 (lower is better)
Translates to: LQKERIQNQLAVSLCHTGGPEWR*PARGLC
Trigger: ACATAGTCCACGTGCAGGCCATCTCCATTCAGGGCC...GCCTGTGTGACACAGGGACACTGCAAGTTGATTTTGGATCCTCTCCTTTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496770.1
CDS-3UTR CCA 90 bp GCCCGTGGGCCTGGGGACCAGCTGAGAAGAAAAATGGAATCCTTCTCCCTGCAGGGGCCAGATGTTTGTTaGATAATCATCATCAGAACC +
Preference number: 4 (lower is better)
Translates to: ARGPGDQLRRKMESFSLQGPDVC*IIIIRT
Trigger: GGTTCTGATGATGATTATCCAACAAACATCTGGCCC...CTGCAGGGAGAAGGATTCCATTTTTCTTCTCAGCTGGTCCCCAGGCCCACGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp CCCATGCAGGCATCTGGCAGCCGTAACTCGTCAGTCCTAGGGAAGAGTCTACCTAGGTGCTTCTGGAGATaGGAGTTAATAAGAGGCTTC +
Preference number: 4 (lower is better)
Translates to: PMQASGSRNSSVLGKSLPRCFWR*ELIRGF
Trigger: GAAGCCTCTTATTAACTCCCATCTCCAGAAGCACCT...AGGTAGACTCTTCCCTAGGACTGACGAGTTACGGCTGCCAGATGCCTGCATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp TTGCAAAAGTGTGCATCACACCACAAACATGTCCTTGATGGCTGGATCCAGAAACTGAATGGCCAAGACTaGGTCCTGGGCCCATGGCCC +
Preference number: 4 (lower is better)
Translates to: LQKCASHHKHVLDGWIQKLNGQD*VLGPWP
Trigger: GGGCCATGGGCCCAGGACCCAGTCTTGGCCATTCAG...TTTCTGGATCCAGCCATCAAGGACATGTTTGTGGTGTGATGCACACTTTTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp CTCTTCCTGTCCGTGGTGAATGGCTCAGGCCTGCCTTCCAGCAGCTTCTACTCCTTCTCTGATGTTCCTTaGTCTGAAAGACACAGCTTG +
Preference number: 4 (lower is better)
Translates to: LFLSVVNGSGLPSSSFYSFSDVP*SERHSL
Trigger: CAAGCTGTGTCTTTCAGACCAAGGAACATCAGAGAA...GGAGTAGAAGCTGCTGGAAGGCAGGCCTGAGCCATTCACCACGGACAGGAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR TCA 90 bp GGCGAGGAGGCAGAAGGCTGTGTCTCATGCAGCTTTGCCTTTTCCAGAATGGGGTCATCATCAGAACCATaGGATCCTCTCACATTCTCT +
Preference number: 4 (lower is better)
Translates to: GEEAEGCVSCSFAFSRMGSSSEP*DPLTFS
Trigger: AGAGAATGTGAGAGGATCTCATGGTTCTGATGATGA...CCCCATTCTGGAAAAGGCAAAGCTGCATGAGACACAGCCTTCTGCCTCCTCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR TCA 90 bp TTGCAAAAGTGTGCATCACACCACAAACATGTCCTTGATGGCTGGATCCAGAAACAGCAGTCATCCCTCTaGGTGCAGCCTCAGCCACTG +
Preference number: 4 (lower is better)
Translates to: LQKCASHHKHVLDGWIQKQQSSL*VQPQPL
Trigger: CAGTGGCTGAGGCTGCACTCAGAGGGATGACTGCTG...TTTCTGGATCCAGCCATCAAGGACATGTTTGTGGTGTGATGCACACTTTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR TCA 90 bp CTAAGGAAGGACATGAGGACCCTGGGTAACTTTCATGGAACCCTGGATGAGATGTCCCACACCCATCCTTaGCCACCAATGGAAGATGCA +
Preference number: 4 (lower is better)
Translates to: LRKDMRTLGNFHGTLDEMSHTHP*PPMEDA
Trigger: TGCATCTTCCATTGGTGGTCAAGGATGGGTGTGGGA...CATCTCATCCAGGGTTCCATGAAAGTTACCCAGGGTCCTCATGTCCTTCCTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR GCA 90 bp AAAGAAGATAGAGGATGCAGGCAACCAGCTCAGTCTTCGGGGGAATTTCTCTGCCCTGGTGCTCTGGTGTaGTGGTTTCTGATGCACTCT +
Preference number: 4 (lower is better)
Translates to: KEDRGCRQPAQSSGEFLCPGALV*WFLMHS
Trigger: AGAGTGCATCAGAAACCAGCACACCAGAGCACCAGG...GCAGAGAAATTCCCCCGAAGACTGAGCTGGTTGCCTGCATCCTCTATCTTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR GCA 90 bp ATAAGGGTCAAAGAAGATAGAGGATGCAGGCAACCAGCTCAGTCTTCGGGGGAAGAGGCTTCAGGAAAGTaGGCCAGAGAGAGGACAGTA +
Preference number: 4 (lower is better)
Translates to: IRVKEDRGCRQPAQSSGEEASGK*ARERTV
Trigger: TACTGTCCTCTCTCTGGCGCACTTTCCTGAAGCCTC...TTCCCCCGAAGACTGAGCTGGTTGCCTGCATCCTCTATCTTCTTTGACCCTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR GCA 90 bp AAAGAAGATAGAGGATGCAGGCAACCAGCTCAGTCTTCGGGGGAATTTCTCTGCTGGAATCCTTCTCCCTaGAGACAGGCAGTCACGCTT +
Preference number: 4 (lower is better)
Translates to: KEDRGCRQPAQSSGEFLCWNPSP*RQAVTL
Trigger: AAGCGTGACTGCCTGTCTGCAGGGAGAAGGATTCCA...GCAGAGAAATTCCCCCGAAGACTGAGCTGGTTGCCTGCATCCTCTATCTTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp CACACCACTCAGGCTCTAAGGAAGGACATGAGGACCCTGGGTAACTTTCATGGAGCCTTCTTGCAAGGCTaGAAACAGGACAGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: HTTQALRKDMRTLGNFHGAFLQG*KQDRRR
Trigger: CCTTCTTCTGTCCTGTTTCCAGCCTTGCAAGAAGGC...TCCATGAAAGTTACCCAGGGTCCTCATGTCCTTCCTTAGAGCCTGAGTGGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp CAGAACCATGAGATCCTCTCACATTCTCTACTGTCTGTCTTCTTAGCTGCTGAGTTGGGTGATGGCTTCTaGCTCTCTGGCTTGGGGACC +
Preference number: 4 (lower is better)
Translates to: QNHEILSHSLLSVFLAAELGDGF*LSGLGT
Trigger: GGTCCCCAAGCCAGAGAGCCAGAAGCCATCACCCAA...CTCAGCAGCTAAGAAGACAGACAGTAGAGAATGTGAGAGGATCTCATGGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR TCA 90 bp ATCCAAAATCAACTTGCAGTGTCCCTGTGTCACACAGGCAGCAGCCAAGTCTGGAGATGGCAAATCCGATaGCAACCTCATCCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: IQNQLAVSLCHTGSSQVWRWQIR*QPHPPE
Trigger: TTCTGGAGGATGAGGTTGTCATCGGATTTGCCATCT...CCAGACTTGGCTGCTGCCTGTGTGACACAGGGACACTGCAAGTTGATTTTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496770.1
CDS-3UTR TCA 90 bp GAGTCAGTCCTTGTGCTTGTCATCTCCCAGGGCTTTGTGCATTTTCTCAAAGAGGGCCTGGGGACCAGCTaGGAAGAAAAATGGAATCCT +
Preference number: 4 (lower is better)
Translates to: ESVLVLVISQGFVHFLKEGLGTS*EEKWNP
Trigger: AGGATTCCATTTTTCTTCTCAGCTGGTCCCCAGGCC...CTCTTTGAGAAAATGCACAAAGCCCTGGGAGATGACAAGCACAAGGACTGACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR GCA 90 bp CAGAACCATGAGATCCTCTCACATTCTCTACTGTCTGTCTTCTTAGCTGCTGAGGAGTTGGCCTTGAGGTaGCTGACGGTGACGTTCACT +
Preference number: 4 (lower is better)
Translates to: QNHEILSHSLLSVFLAAEELALR*LTVTFT
Trigger: AGTGAACGTCACCGTCAGGCACCTCAAGGCCAACTC...CTCAGCAGCTAAGAAGACAGACAGTAGAGAATGTGAGAGGATCTCATGGTTCTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR GCA 90 bp TTCAGGAAAGTGCGCCAGAGAGAGGACAGTAAGCCAGAGGGTACAAGGAGATGGAAAGAAGATAGAGGATaGAGGCAACCAGCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: FRKVRQREDSKPEGTRRWKEDRG*RQPAQS
Trigger: AGACTGAGCTGGTTGCCTGCATCCTCTATCTTCTTT...CCATCTCCTTGTACCCTCTGGCTTACTGTCCTCTCTCTGGCGCACTTTCCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp AAGACAATGAGTGGAGCCTCATGCCCTCCCATGAGGAAGCCCTTAGTATTGCTGCCTCATCTTTGTTCTTaGAGGCCATCTTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: KTMSGASCPPMRKPLVLLPHLCS*RPSSQP
Trigger: AGGCTGAGAAGATGGCCTCCAAGAACAAAGATGAGG...CAGCAATACTAAGGGCTTCCTCATGGGAGGGCATGAGGCTCCACTCATTGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp ATCCAAAATCAACTTGCAGTGTCCCTGTGTCACACAGGCAGCAGCCAAGTCTGGCCTCATCTTTGTTCTTaGAGGCCATCTTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: IQNQLAVSLCHTGSSQVWPHLCS*RPSSQP
Trigger: AGGCTGAGAAGATGGCCTCCAAGAACAAAGATGAGG...CCAGACTTGGCTGCTGCCTGTGTGACACAGGGACACTGCAAGTTGATTTTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496770.1
CDS-3UTR CCA 90 bp GTGGTTCTCCCACACCCATCCTTGACCACCAATGGAAGATGCAGATGTCCACCTAGGTGCTTCTGGAGATaGGAGTTAATAAGAGGCTTC +
Preference number: 4 (lower is better)
Translates to: VVLPHPSLTTNGRCRCPPRCFWR*ELIRGF
Trigger: GAAGCCTCTTATTAACTCCCATCTCCAGAAGCACCT...AGGTGGACATCTGCATCTTCCATTGGTGGTCAAGGATGGGTGTGGGAGAACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp ATAAGAGGCTTCAGGAAAGTGCGCCAGAGAGAGGACAGTAAGCCAGAGGGTACAAAGAGAAGCCCTGCCTaGATGTCTTGTCTTTTTGCC +
Preference number: 4 (lower is better)
Translates to: IRGFRKVRQREDSKPEGTKRSPA*MSCLFA
Trigger: GGCAAAAAGACAAGACATCCAGGCAGGGCTTCTCTT...TGTACCCTCTGGCTTACTGTCCTCTCTCTGGCGCACTTTCCTGAAGCCTCTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp AAAGAAGATAGAGGATGCAGGCAACCAGCTCAGTCTTCGGGGGAATTTCTCTGCTCTGGCTCTCTGGCTTaGGGACCAATGCTCTTATCA +
Preference number: 4 (lower is better)
Translates to: KEDRGCRQPAQSSGEFLCSGSLA*GPMLLS
Trigger: TGATAAGAGCATTGGTCCCCAAGCCAGAGAGCCAGA...GCAGAGAAATTCCCCCGAAGACTGAGCTGGTTGCCTGCATCCTCTATCTTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp ATAAGGGTCAAAGAAGATAGAGGATGCAGGCAACCAGCTCAGTCTTCGGGGGAATCTGGCTCTCTGGCTTaGGGACCAATGCTCTTATCA +
Preference number: 4 (lower is better)
Translates to: IRVKEDRGCRQPAQSSGESGSLA*GPMLLS
Trigger: TGATAAGAGCATTGGTCCCCAAGCCAGAGAGCCAGA...TTCCCCCGAAGACTGAGCTGGTTGCCTGCATCCTCTATCTTCTTTGACCCTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp ATAAGGGTCAAAGAAGATAGAGGATGCAGGCAACCAGCTCAGTCTTCGGGGGAATCACAAGACAATGAGTaGAGCCTCATGCCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: IRVKEDRGCRQPAQSSGESQDNE*SLMPSH
Trigger: ATGGGAGGGCATGAGGCTCCACTCATTGTCTTGTGA...TTCCCCCGAAGACTGAGCTGGTTGCCTGCATCCTCTATCTTCTTTGACCCTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR CAA 72 bp TTGAGTCAGTCCTTGTGCTTGTCATCTCCCAGGGCTTaGTGCATTTTCTCAAAGAGGAAGCCAGTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LSQSLCLSSPRA*CIFSKRKPVQE
Trigger: CTCCTGGACTGGCTTCCTCTTTGAGAAAATGCACAAAGCCCTGGGAGATGACAAGCACAAGGACTGACTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR TCA 90 bp AAGGACATGAGGACCCTGGGTAACTTTCATGGAACCCTGGATGAGATGGCAAGAAGATGGCAAATCCGATaGCAACCTCATCCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: KDMRTLGNFHGTLDEMARRWQIR*QPHPPE
Trigger: TTCTGGAGGATGAGGTTGTCATCGGATTTGCCATCT...TCTTGCCATCTCATCCAGGGTTCCATGAAAGTTACCCAGGGTCCTCATGTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR TCA 90 bp AAAGAAGATAGAGGATGCAGGCAACCAGCTCAGTCTTCGGGGGAATTTCTCTGCCCAGAATGCCAGCTGTaGTGTGACTTTTCAGTTGTC +
Preference number: 4 (lower is better)
Translates to: KEDRGCRQPAQSSGEFLCPECQL*CDFSVV
Trigger: GACAACTGAAAAGTCACATCACAGCTGGCATTCTGG...GCAGAGAAATTCCCCCGAAGACTGAGCTGGTTGCCTGCATCCTCTATCTTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR GCA 90 bp ACAATGAGTGGAGCCTCATGCCCTCCCATGAGGAAGCCCTTAGTATTGCTGACACTGACATTGTTGAGGTaGTTCTGGAGATGGGAGTTA +
Preference number: 4 (lower is better)
Translates to: TMSGASCPPMRKPLVLLTLTLLR*FWRWEL
Trigger: TAACTCCCATCTCCAGAAGCACCTCAACAATGTCAG...TGTCAGCAATACTAAGGGCTTCCTCATGGGAGGGCATGAGGCTCCACTCATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR GCA 90 bp GTGGTTCTCCCACACCCATCCTTGACCACCAATGGAAGATGCAGATGTCCACCTAGAAAAGAGAAGCCCTaGCTGGATGTCTTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: VVLPHPSLTTNGRCRCPPRKEKP*LDVLSF
Trigger: AAAAGACAAGACATCCAGGCAGGGCTTCTCTTTTCT...AGGTGGACATCTGCATCTTCCATTGGTGGTCAAGGATGGGTGTGGGAGAACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR GCA 90 bp GAGTCAGTCCTTGTGCTTGTCATCTCCCAGGGCTTTGTGCATTTTCTCAAAGAGTGTCTCATGCAGCTTTaGCTTTTCCAGAATGGGGCC +
Preference number: 4 (lower is better)
Translates to: ESVLVLVISQGFVHFLKECLMQL*LFQNGA
Trigger: GGCCCCATTCTGGAAAAGGCAAAGCTGCATGAGACA...CTCTTTGAGAAAATGCACAAAGCCCTGGGAGATGACAAGCACAAGGACTGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR GCA 90 bp ATAAGGGTCAAAGAAGATAGAGGATGCAGGCAACCAGCTCAGTCTTCGGGGGAAGAAGGCTGTGTCTCATaGAGCTTTGCCTTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: IRVKEDRGCRQPAQSSGEEGCVS*SFAFSR
Trigger: TCTGGAAAAGGCAAAGCTGCATGAGACACAGCCTTC...TTCCCCCGAAGACTGAGCTGGTTGCCTGCATCCTCTATCTTCTTTGACCCTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR GCA 90 bp CACACCACTCAGGCTCTAAGGAAGGACATGAGGACCCTGGGTAACTTTCATGGAAAAGAAGATAGAGGATaGAGGCAACCAGCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: HTTQALRKDMRTLGNFHGKEDRG*RQPAQS
Trigger: AGACTGAGCTGGTTGCCTGCATCCTCTATCTTCTTT...TCCATGAAAGTTACCCAGGGTCCTCATGTCCTTCCTTAGAGCCTGAGTGGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp AAGGACATGAGGACCCTGGGTAACTTTCATGGAACCCTGGATGAGATGGCAAGAACATCCTTCTTCTGCTaGGAGATGGCAAATCCGATG +
Preference number: 4 (lower is better)
Translates to: KDMRTLGNFHGTLDEMARTSFFC*EMANPM
Trigger: CATCGGATTTGCCATCTCCCAGCAGAAGAAGGATGT...TCTTGCCATCTCATCCAGGGTTCCATGAAAGTTACCCAGGGTCCTCATGTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373471.9
CDS-3UTR CCA 90 bp CACACCACTCAGGCTCTAAGGAAGGACATGAGGACCCTGGGTAACTTTCATGGACATGTCCTTGATGGCTaGATCCAGAAAAGGCTTGAT +
Preference number: 4 (lower is better)
Translates to: HTTQALRKDMRTLGNFHGHVLDG*IQKRLD
Trigger: ATCAAGCCTTTTCTGGATCCAGCCATCAAGGACATG...TCCATGAAAGTTACCCAGGGTCCTCATGTCCTTCCTTAGAGCCTGAGTGGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp GTGGTTCTCCCACACCCATCCTTGACCACCAATGGAAGATGCAGATGTCCACCTACTTTCATGGAACCCTaGATGAGATGGCAAGATATG +
Preference number: 4 (lower is better)
Translates to: VVLPHPSLTTNGRCRCPPTFMEP*MRWQDM
Trigger: CATATCTTGCCATCTCATCCAGGGTTCCATGAAAGT...AGGTGGACATCTGCATCTTCCATTGGTGGTCAAGGATGGGTGTGGGAGAACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp CACACCACTCAGGCTCTAAGGAAGGACATGAGGACCCTGGGTAACTTTCATGGAGGTTATTGCTCTAAGTaGATCAGAGGTAAGGACCTC +
Preference number: 4 (lower is better)
Translates to: HTTQALRKDMRTLGNFHGGYCSK*IRGKDL
Trigger: GAGGTCCTTACCTCTGATCCACTTAGAGCAATAACC...TCCATGAAAGTTACCCAGGGTCCTCATGTCCTTCCTTAGAGCCTGAGTGGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR TCA 90 bp CTAAGGAAGGACATGAGGACCCTGGGTAACTTTCATGGAACCCTGGATGAGATGGCTGAGGGCAAGCACTaGAAAGGTTTTCATATCTTG +
Preference number: 4 (lower is better)
Translates to: LRKDMRTLGNFHGTLDEMAEGKH*KGFHIL
Trigger: CAAGATATGAAAACCTTTTCAGTGCTTGCCCTCAGC...CATCTCATCCAGGGTTCCATGAAAGTTACCCAGGGTCCTCATGTCCTTCCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp CACACCACTCAGGCTCTAAGGAAGGACATGAGGACCCTGGGTAACTTTCATGGAGGGCCAGATGTTTGTTaGATAATCATCATCAGAACC +
Preference number: 4 (lower is better)
Translates to: HTTQALRKDMRTLGNFHGGPDVC*IIIIRT
Trigger: GGTTCTGATGATGATTATCCAACAAACATCTGGCCC...TCCATGAAAGTTACCCAGGGTCCTCATGTCCTTCCTTAGAGCCTGAGTGGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp ATAAGAGGCTTCAGGAAAGTGCGCCAGAGAGAGGACAGTAAGCCAGAGGGTACATTCTCTGATGTTCCTTaGTCTGAAAGACACAGCTTG +
Preference number: 4 (lower is better)
Translates to: IRGFRKVRQREDSKPEGTFSDVP*SERHSL
Trigger: CAAGCTGTGTCTTTCAGACCAAGGAACATCAGAGAA...TGTACCCTCTGGCTTACTGTCCTCTCTCTGGCGCACTTTCCTGAAGCCTCTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp ATAAGGGTCAAAGAAGATAGAGGATGCAGGCAACCAGCTCAGTCTTCGGGGGAACATGTCCTTGATGGCTaGATCCAGAAAAGGCTTGAT +
Preference number: 4 (lower is better)
Translates to: IRVKEDRGCRQPAQSSGEHVLDG*IQKRLD
Trigger: ATCAAGCCTTTTCTGGATCCAGCCATCAAGGACATG...TTCCCCCGAAGACTGAGCTGGTTGCCTGCATCCTCTATCTTCTTTGACCCTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp ATAAGGGTCAAAGAAGATAGAGGATGCAGGCAACCAGCTCAGTCTTCGGGGGAAGGTTATTGCTCTAAGTaGATCAGAGGTAAGGACCTC +
Preference number: 4 (lower is better)
Translates to: IRVKEDRGCRQPAQSSGEGYCSK*IRGKDL
Trigger: GAGGTCCTTACCTCTGATCCACTTAGAGCAATAACC...TTCCCCCGAAGACTGAGCTGGTTGCCTGCATCCTCTATCTTCTTTGACCCTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR TCA 90 bp ATAAGGGTCAAAGAAGATAGAGGATGCAGGCAACCAGCTCAGTCTTCGGGGGAATCATCATCAGAACCATaGGATCCTCTCACATTCTCT +
Preference number: 4 (lower is better)
Translates to: IRVKEDRGCRQPAQSSGESSSEP*DPLTFS
Trigger: AGAGAATGTGAGAGGATCTCATGGTTCTGATGATGA...TTCCCCCGAAGACTGAGCTGGTTGCCTGCATCCTCTATCTTCTTTGACCCTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR GCA 90 bp TTGCAAAAGTGTGCATCACACCACAAACATGTCCTTGATGGCTGGATCCAGAAATGTCTCATGCAGCTTTaGCTTTTCCAGAATGGGGCC +
Preference number: 4 (lower is better)
Translates to: LQKCASHHKHVLDGWIQKCLMQL*LFQNGA
Trigger: GGCCCCATTCTGGAAAAGGCAAAGCTGCATGAGACA...TTTCTGGATCCAGCCATCAAGGACATGTTTGTGGTGTGATGCACACTTTTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR GCA 90 bp TTGCAAAAGTGTGCATCACACCACAAACATGTCCTTGATGGCTGGATCCAGAAAACCACCAATGGAAGATaGAGATGTCCACCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LQKCASHHKHVLDGWIQKTTNGR*RCPPLP
Trigger: GGGAAGAGGTGGACATCTGCATCTTCCATTGGTGGT...TTTCTGGATCCAGCCATCAAGGACATGTTTGTGGTGTGATGCACACTTTTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp AAGGACATGAGGACCCTGGGTAACTTTCATGGAACCCTGGATGAGATGGCAAGAACTTTCATGGAACCCTaGATGAGATGGCAAGATATG +
Preference number: 4 (lower is better)
Translates to: KDMRTLGNFHGTLDEMARTFMEP*MRWQDM
Trigger: CATATCTTGCCATCTCATCCAGGGTTCCATGAAAGT...TCTTGCCATCTCATCCAGGGTTCCATGAAAGTTACCCAGGGTCCTCATGTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
3UTR CAA 72 bp TGGTCTGAAAGACACAGCTTGAGTCAGTCCTTGTGCTaGTCATCTCCCAGGGCTTTGTGCATTTTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: WSERHSLSQSLC*SSPRALCIFSK
Trigger: CTTTGAGAAAATGCACAAAGCCCTGGGAGATGACAAGCACAAGGACTGACTCAAGCTGTGTCTTTCAGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp AAAGAAGATAGAGGATGCAGGCAACCAGCTCAGTCTTCGGGGGAATTTCTCTGCTTGTTGAGGTGCTTCTaGAGATGGGAGTTAATAAGA +
Preference number: 4 (lower is better)
Translates to: KEDRGCRQPAQSSGEFLCLLRCF*RWELIR
Trigger: TCTTATTAACTCCCATCTCCAGAAGCACCTCAACAA...GCAGAGAAATTCCCCCGAAGACTGAGCTGGTTGCCTGCATCCTCTATCTTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp AACTTTCATGGAACCCTGGATGAGATGGCAAGATATGAAGACCCCAGAGGCCAGTTGTTGAGGTGCTTCTaGAGATGGGAGTTAATAAGA +
Preference number: 4 (lower is better)
Translates to: NFHGTLDEMARYEDPRGQLLRCF*RWELIR
Trigger: TCTTATTAACTCCCATCTCCAGAAGCACCTCAACAA...CTGGCCTCTGGGGTCTTCATATCTTGCCATCTCATCCAGGGTTCCATGAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CCA 90 bp TTGCAAAAGTGTGCATCACACCACAAACATGTCCTTGATGGCTGGATCCAGAAAAAGAGAAGCCCTGCCTaGATGTCTTGTCTTTTTGCC +
Preference number: 4 (lower is better)
Translates to: LQKCASHHKHVLDGWIQKKRSPA*MSCLFA
Trigger: GGCAAAAAGACAAGACATCCAGGCAGGGCTTCTCTT...TTTCTGGATCCAGCCATCAAGGACATGTTTGTGGTGTGATGCACACTTTTGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR TCA 90 bp TTGCAAAAGTGTGCATCACACCACAAACATGTCCTTGATGGCTGGATCCAGAAAGCTGAGGGCAAGCACTaGAAAGGTTTTCATATCTTG +
Preference number: 4 (lower is better)
Translates to: LQKCASHHKHVLDGWIQKAEGKH*KGFHIL
Trigger: CAAGATATGAAAACCTTTTCAGTGCTTGCCCTCAGC...TTTCTGGATCCAGCCATCAAGGACATGTTTGTGGTGTGATGCACACTTTTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR GCA 90 bp AACTTTCATGGAACCCTGGATGAGATGGCAAGATATGAAGACCCCAGAGGCCAGTTAAAAAGTGGTTATTaGTCTAAGTGGATCAGAGGT +
Preference number: 4 (lower is better)
Translates to: NFHGTLDEMARYEDPRGQLKSGY*SKWIRG
Trigger: ACCTCTGATCCACTTAGAGCAATAACCACTTTTTAA...CTGGCCTCTGGGGTCTTCATATCTTGCCATCTCATCCAGGGTTCCATGAAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373471.9
CDS-3UTR CAA 90 bp GAATGGCCAAGACTGGGTCCTGGGCCCATGGCCCCTGGCACCCAGTCTACCCCCCCAGTGCTGTCACACTaGGGCAAAGCAGAGTGGTGG +
Preference number: 5 (lower is better)
Translates to: EWPRLGPGPMAPGTQSTPPVLSH*GKAEWW
Trigger: CCACCACTCTGCTTTGCCCAAGTGTGACAGCACTGG...GGGGGTAGACTGGGTGCCAGGGGCCATGGGCCCAGGACCCAGTCTTGGCCATTC
64% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS GCA 90 bp TCCTCCAGAACATCCCAGCTCACCACTGCAGAGTTGGCCTTGAGGTaGCTGACGGTGACGTTCACTGGGGCTGAGGGACTGTCCGCCTGC +
Preference number: 5 (lower is better)
Translates to: SSRTSQLTTAELALR*LTVTFTGAEGLSAC
Trigger: GCAGGCGGACAGTCCCTCAGCCCCAGTGAACGTCACCGTCAGGCACCTCAAGGCCAACTCTGCAGTGGTGAGCTGGGATGTTCTGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS CCA 90 bp CTTCTCAGCCTCACGCGGGGTCTTGAAGAGCACAGGCTCGCTGGCTaGGCTCTGGCCCTGAATGGAGATGGCCTGCACGTGGACTATGTA +
Preference number: 5 (lower is better)
Translates to: LLSLTRGLEEHRLAG*ALALNGDGLHVDYV
Trigger: TACATAGTCCACGTGCAGGCCATCTCCATTCAGGGCCAGAGCCCAGCCAGCGAGCCTGTGCTCTTCAAGACCCCGCGTGAGGCTGAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373471.9
ENST00000496770.1
ENST00000649537.2
CDS CCA 90 bp GAGGGACTTGTCCTGGGAGAGCCTCAGCTGGGACCTCGACCCGTTTaGGAGAAGAGCCCCGGAGCCAGAGCACCTCTCTCTCTCTTTTCT +
Preference number: 5 (lower is better)
Translates to: EGLVLGEPQLGPRPV*EKSPGARAPLSLFS
Trigger: AGAAAAGAGAGAGAGAGGTGCTCTGGCTCCGGGGCTCTTCTCCCAAACGGGTCGAGGTCCCAGCTGAGGCTCTCCCAGGACAAGTCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496770.1
CDS-3UTR CAA 90 bp ATCAACTTGCAGTGTCCCTGTGTCACACAGGCAGCAGCCAAGTCTGGCTCTGCCGCCTCACGCGGGGTCTaGAAGAGCACAGGCTCGCTG +
Preference number: 5 (lower is better)
Translates to: INLQCPCVTQAAAKSGSAASRGV*KSTGSL
Trigger: CAGCGAGCCTGTGCTCTTCAAGACCCCGCGTGAGGC...GGCAGAGCCAGACTTGGCTGCTGCCTGTGTGACACAGGGACACTGCAAGTTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496770.1
CDS GCA 90 bp TCCTCCAGAACATCCCAGCTCACCACTGCAGAGTTGGCCTTGAGGTaGCTGACGGTGACGTTCACTGGGGCTGAGGGACTTGTCCTGGGA +
Preference number: 5 (lower is better)
Translates to: SSRTSQLTTAELALR*LTVTFTGAEGLVLG
Trigger: TCCCAGGACAAGTCCCTCAGCCCCAGTGAACGTCACCGTCAGGCACCTCAAGGCCAACTCTGCAGTGGTGAGCTGGGATGTTCTGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496770.1
CDS-3UTR CAA 90 bp CTCTTCCTGTCCGTGGTGAATGGCTCAGGCCTGCCTTCCAGCAGCTTCTACTCCACTGCAGAGTTGGCCTaGAGGTGCCTGACGGTGACG +
Preference number: 5 (lower is better)
Translates to: LFLSVVNGSGLPSSSFYSTAELA*RCLTVT
Trigger: CGTCACCGTCAGGCACCTCAAGGCCAACTCTGCAGT...GGAGTAGAAGCTGCTGGAAGGCAGGCCTGAGCCATTCACCACGGACAGGAAGAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp GCCCGTGGGCCTGGGGACCAGCTGAGAAGAAAAATGGAATCCTTCTCCCTGCAGAGGAAGGGGCGGTCATaGGGTGATGGCTTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: ARGPGDQLRRKMESFSLQRKGRS*GDGFWL
Trigger: GAGCCAGAAGCCATCACCCAATGACCGCCCCTTCCT...CTGCAGGGAGAAGGATTCCATTTTTCTTCTCAGCTGGTCCCCAGGCCCACGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp GGGCGGTCATTGGGTGATGGCTTCTGGCTCTCTGGCTTGGGGACCAATGCTCTTGTGGCAGACCCAGCCTaGAGAGCTCTTGTAGACCGG +
Preference number: 5 (lower is better)
Translates to: GRSLGDGFWLSGLGTNALVADPA*RALVDR
Trigger: CCGGTCTACAAGAGCTCTCAAGGCTGGGTCTGCCAC...AAGAGCATTGGTCCCCAAGCCAGAGAGCCAGAAGCCATCACCCAATGACCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp GGCGAGGAGGCAGAAGGCTGTGTCTCATGCAGCTTTGCCTTTTCCAGAATGGGGCTCACCACTGCAGAGTaGGCCTTGAGGTGCCTGACG +
Preference number: 5 (lower is better)
Translates to: GEEAEGCVSCSFAFSRMGLTTAE*ALRCLT
Trigger: CGTCAGGCACCTCAAGGCCAACTCTGCAGTGGTGAG...CCCCATTCTGGAAAAGGCAAAGCTGCATGAGACACAGCCTTCTGCCTCCTCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp CCCATGCAGGCATCTGGCAGCCGTAACTCGTCAGTCCTAGGGAAGAGTCTACCTAGGAAGGGGCGGTCATaGGGTGATGGCTTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: PMQASGSRNSSVLGKSLPRKGRS*GDGFWL
Trigger: GAGCCAGAAGCCATCACCCAATGACCGCCCCTTCCT...AGGTAGACTCTTCCCTAGGACTGACGAGTTACGGCTGCCAGATGCCTGCATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp CCGTGGGCCTGGGGACCAGCTGAGAAGAAAAATGGAATCCTTCTCCCTGCAGACGTGGCAGACCCAGCCTaGAGAGCTCTTGTAGACCGG +
Preference number: 5 (lower is better)
Translates to: PWAWGPAEKKNGILLPADVADPA*RALVDR
Trigger: CCGGTCTACAAGAGCTCTCAAGGCTGGGTCTGCCAC...GTCTGCAGGGAGAAGGATTCCATTTTTCTTCTCAGCTGGTCCCCAGGCCCACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp CCCAGCCTTCAGCCTCACTCAACTGAATGGCCAAGACTGGGTCCTGGGCCCATGAGTCAGTCCTTGTGCTaGTCATCTCCCAGGGCTTTG +
Preference number: 5 (lower is better)
Translates to: PSLQPHSTEWPRLGPGPMSQSLC*SSPRAL
Trigger: CAAAGCCCTGGGAGATGACAAGCACAAGGACTGACT...CATGGGCCCAGGACCCAGTCTTGGCCATTCAGTTGAGTGAGGCTGAAGGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp CCGTGGGCCTGGGGACCAGCTGAGAAGAAAAATGGAATCCTTCTCCCTGCAGACCCAGTGCTGTCACACTaGGGCAAAGCAGAGTGGTGG +
Preference number: 5 (lower is better)
Translates to: PWAWGPAEKKNGILLPADPVLSH*GKAEWW
Trigger: CCACCACTCTGCTTTGCCCAAGTGTGACAGCACTGG...GTCTGCAGGGAGAAGGATTCCATTTTTCTTCTCAGCTGGTCCCCAGGCCCACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp CTGCAAAAGGAGAGGATCCAAAATCAACTTGCAGTGTCCCTGTGTCACACAGGCGGGACCTCGACCCGTTaGGGAGAAGAGCCCCGGAGC +
Preference number: 5 (lower is better)
Translates to: LQKERIQNQLAVSLCHTGGTSTR*GEEPRS
Trigger: GCTCCGGGGCTCTTCTCCCAAACGGGTCGAGGTCCC...GCCTGTGTGACACAGGGACACTGCAAGTTGATTTTGGATCCTCTCCTTTTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496770.1
CDS-3UTR CAA 90 bp CTGGCACCCTGCAAAAGGAGAGGATCCAAAATCAACTTGCAGTGTCCCTGTGTCCTGGGGCTGAGGGACTaGTCCTGGGAGAGCCTCAGC +
Preference number: 5 (lower is better)
Translates to: LAPCKRRGSKINLQCPCVLGLRD*SWESLS
Trigger: GCTGAGGCTCTCCCAGGACAAGTCCCTCAGCCCCAG...GACACAGGGACACTGCAAGTTGATTTTGGATCCTCTCCTTTTGCAGGGTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496770.1
CDS GCA 90 bp AAATCCGATGACAACCTCATCCTCCAGAACATCCCAGCTCACCACTaGAGAGTTGGCCTTGAGGTGCCTGACGGTGACGTTCACTGGGGC +
Preference number: 5 (lower is better)
Translates to: KSDDNLILQNIPAHH*RVGLEVPDGDVHWG
Trigger: GCCCCAGTGAACGTCACCGTCAGGCACCTCAAGGCCAACTCTGCAGTGGTGAGCTGGGATGTTCTGGAGGATGAGGTTGTCATCGGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373471.9
ENST00000496770.1
ENST00000649537.2
CDS-3UTR CAA 90 bp ATAAGGGTCAAAGAAGATAGAGGATGCAGGCAACCAGCTCAGTCTTCGGGGGAAGCCTCACGCGGGGTCTaGAAGAGCACAGGCTCGCTG +
Preference number: 5 (lower is better)
Translates to: IRVKEDRGCRQPAQSSGEASRGV*KSTGSL
Trigger: CAGCGAGCCTGTGCTCTTCAAGACCCCGCGTGAGGC...TTCCCCCGAAGACTGAGCTGGTTGCCTGCATCCTCTATCTTCTTTGACCCTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp ATAAGGGTCAAAGAAGATAGAGGATGCAGGCAACCAGCTCAGTCTTCGGGGGAATCCCCACTGCTGCAGTaGTCCCTCTCCCTGTGCCCG +
Preference number: 5 (lower is better)
Translates to: IRVKEDRGCRQPAQSSGESPLLQ*SLSLCP
Trigger: CGGGCACAGGGAGAGGGACAACTGCAGCAGTGGGGA...TTCCCCCGAAGACTGAGCTGGTTGCCTGCATCCTCTATCTTCTTTGACCCTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp GAGAGGATCCAAAATCAACTTGCAGTGTCCCTGTGTCACACAGGCAGCAGCCAAACTGCAGAGTTGGCCTaGAGGTGCCTGACGGTGACG +
Preference number: 5 (lower is better)
Translates to: ERIQNQLAVSLCHTGSSQTAELA*RCLTVT
Trigger: CGTCACCGTCAGGCACCTCAAGGCCAACTCTGCAGT...TTGGCTGCTGCCTGTGTGACACAGGGACACTGCAAGTTGATTTTGGATCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496770.1
CDS-3UTR CAA 90 bp GAGAGGATCCAAAATCAACTTGCAGTGTCCCTGTGTCACACAGGCAGCAGCCAACTCACCACTGCAGAGTaGGCCTTGAGGTGCCTGACG +
Preference number: 5 (lower is better)
Translates to: ERIQNQLAVSLCHTGSSQLTTAE*ALRCLT
Trigger: CGTCAGGCACCTCAAGGCCAACTCTGCAGTGGTGAG...TTGGCTGCTGCCTGTGTGACACAGGGACACTGCAAGTTGATTTTGGATCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496770.1
CDS-3UTR CAA 90 bp CTCTTCCTGTCCGTGGTGAATGGCTCAGGCCTGCCTTCCAGCAGCTTCTACTCCACCTCATCTTTGTTCTaGGAGGCCATCTTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: LFLSVVNGSGLPSSSFYSTSSLF*EAIFSA
Trigger: GGCTGAGAAGATGGCCTCCAAGAACAAAGATGAGGT...GGAGTAGAAGCTGCTGGAAGGCAGGCCTGAGCCATTCACCACGGACAGGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp CCCAGCCTTCAGCCTCACTCAACTGAATGGCCAAGACTGGGTCCTGGGCCCATGCCAAGCTCTTGTCCCTaGTGGAAAGAAAAGAGAAGC +
Preference number: 5 (lower is better)
Translates to: PSLQPHSTEWPRLGPGPMPSSCP*WKEKRS
Trigger: GCTTCTCTTTTCTTTCCACAAGGGACAAGAGCTTGG...CATGGGCCCAGGACCCAGTCTTGGCCATTCAGTTGAGTGAGGCTGAAGGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp AGGAGAGGCGAGGAGGCAGAAGGCTGTGTCTCATGCAGCTTTGCCTTTTCCAGATCCAGAAGGGGTGTTTaGGTAGCCCCCAGAATGCCA +
Preference number: 5 (lower is better)
Translates to: RRGEEAEGCVSCSFAFSRSRRGV*VAPRMP
Trigger: TGGCATTCTGGGGGCTACCAAAACACCCCTTCTGGA...TCTGGAAAAGGCAAAGCTGCATGAGACACAGCCTTCTGCCTCCTCGCCTCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp CTCTTCCTGTCCGTGGTGAATGGCTCAGGCCTGCCTTCCAGCAGCTTCTACTCCTCTGAAAGACACAGCTaGAGTCAGTCCTTGTGCTTG +
Preference number: 5 (lower is better)
Translates to: LFLSVVNGSGLPSSSFYSSERHS*SQSLCL
Trigger: CAAGCACAAGGACTGACTCAAGCTGTGTCTTTCAGA...GGAGTAGAAGCTGCTGGAAGGCAGGCCTGAGCCATTCACCACGGACAGGAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp CCCAGCCTTCAGCCTCACTCAACTGAATGGCCAAGACTGGGTCCTGGGCCCATGACCACAAACATGTCCTaGATGGCTGGATCCAGAAAA +
Preference number: 5 (lower is better)
Translates to: PSLQPHSTEWPRLGPGPMTTNMS*MAGSRK
Trigger: TTTTCTGGATCCAGCCATCAAGGACATGTTTGTGGT...CATGGGCCCAGGACCCAGTCTTGGCCATTCAGTTGAGTGAGGCTGAAGGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp TTCAGGAAAGTGCGCCAGAGAGAGGACAGTAAGCCAGAGGGTACAAGGAGATGGTCCAGAAGGGGTGTTTaGGTAGCCCCCAGAATGCCA +
Preference number: 5 (lower is better)
Translates to: FRKVRQREDSKPEGTRRWSRRGV*VAPRMP
Trigger: TGGCATTCTGGGGGCTACCAAAACACCCCTTCTGGA...CCATCTCCTTGTACCCTCTGGCTTACTGTCCTCTCTCTGGCGCACTTTCCTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp CCCAGCCTTCAGCCTCACTCAACTGAATGGCCAAGACTGGGTCCTGGGCCCATGAGGAAGCCCTTAGTATaGCTGACATCTGCCCTTTAT +
Preference number: 5 (lower is better)
Translates to: PSLQPHSTEWPRLGPGPMRKPLV*LTSALY
Trigger: ATAAAGGGCAGATGTCAGCAATACTAAGGGCTTCCT...CATGGGCCCAGGACCCAGTCTTGGCCATTCAGTTGAGTGAGGCTGAAGGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp GAGTCAGTCCTTGTGCTTGTCATCTCCCAGGGCTTTGTGCATTTTCTCAAAGAGACTGCAGAGTTGGCCTaGAGGTGCCTGACGGTGACG +
Preference number: 5 (lower is better)
Translates to: ESVLVLVISQGFVHFLKETAELA*RCLTVT
Trigger: CGTCACCGTCAGGCACCTCAAGGCCAACTCTGCAGT...CTCTTTGAGAAAATGCACAAAGCCCTGGGAGATGACAAGCACAAGGACTGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp TGCCCGTGGGCCTGGGGACCAGCTGAGAAGAAAAATGGAATCCTTCTCCCTGCATCTGAAAGACACAGCTaGAGTCAGTCCTTGTGCTTG +
Preference number: 5 (lower is better)
Translates to: CPWAWGPAEKKNGILLPASERHS*SQSLCL
Trigger: CAAGCACAAGGACTGACTCAAGCTGTGTCTTTCAGA...TGCAGGGAGAAGGATTCCATTTTTCTTCTCAGCTGGTCCCCAGGCCCACGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp GGGCGGTCATTGGGTGATGGCTTCTGGCTCTCTGGCTTGGGGACCAATGCTCTTAGGAAGCCCTTAGTATaGCTGACATCTGCCCTTTAT +
Preference number: 5 (lower is better)
Translates to: GRSLGDGFWLSGLGTNALRKPLV*LTSALY
Trigger: ATAAAGGGCAGATGTCAGCAATACTAAGGGCTTCCT...AAGAGCATTGGTCCCCAAGCCAGAGAGCCAGAAGCCATCACCCAATGACCGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp CCCATGCAGGCATCTGGCAGCCGTAACTCGTCAGTCCTAGGGAAGAGTCTACCTATGGTTACCTCATCTTaGTTCTTGGAGGCCATCTTC +
Preference number: 5 (lower is better)
Translates to: PMQASGSRNSSVLGKSLPMVTSS*FLEAIF
Trigger: GAAGATGGCCTCCAAGAACAAAGATGAGGTAACCAT...AGGTAGACTCTTCCCTAGGACTGACGAGTTACGGCTGCCAGATGCCTGCATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp CCCATGCAGGCATCTGGCAGCCGTAACTCGTCAGTCCTAGGGAAGAGTCTACCTGAGAGGGCCAGATGTTaGTTGGATAATCATCATCAG +
Preference number: 5 (lower is better)
Translates to: PMQASGSRNSSVLGKSLPERARC*LDNHHQ
Trigger: CTGATGATGATTATCCAACAAACATCTGGCCCTCTC...AGGTAGACTCTTCCCTAGGACTGACGAGTTACGGCTGCCAGATGCCTGCATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp ACAATGAGTGGAGCCTCATGCCCTCCCATGAGGAAGCCCTTAGTATTGCTGACAAGTCAGTCCTTGTGCTaGTCATCTCCCAGGGCTTTG +
Preference number: 5 (lower is better)
Translates to: TMSGASCPPMRKPLVLLTSQSLC*SSPRAL
Trigger: CAAAGCCCTGGGAGATGACAAGCACAAGGACTGACT...TGTCAGCAATACTAAGGGCTTCCTCATGGGAGGGCATGAGGCTCCACTCATTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp GATCCAAAATCAACTTGCAGTGTCCCTGTGTCACACAGGCAGCAGCCAAGTCTGACCTCATCTTTGTTCTaGGAGGCCATCTTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: DPKSTCSVPVSHRQQPSLTSSLF*EAIFSA
Trigger: GGCTGAGAAGATGGCCTCCAAGAACAAAGATGAGGT...CAGACTTGGCTGCTGCCTGTGTGACACAGGGACACTGCAAGTTGATTTTGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496770.1
CDS-3UTR CAA 90 bp CACACCACTCAGGCTCTAAGGAAGGACATGAGGACCCTGGGTAACTTTCATGGAACCTCATCTTTGTTCTaGGAGGCCATCTTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: HTTQALRKDMRTLGNFHGTSSLF*EAIFSA
Trigger: GGCTGAGAAGATGGCCTCCAAGAACAAAGATGAGGT...TCCATGAAAGTTACCCAGGGTCCTCATGTCCTTCCTTAGAGCCTGAGTGGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp GTGGTTCTCCCACACCCATCCTTGACCACCAATGGAAGATGCAGATGTCCACCTCCAAGCTCTTGTCCCTaGTGGAAAGAAAAGAGAAGC +
Preference number: 5 (lower is better)
Translates to: VVLPHPSLTTNGRCRCPPPSSCP*WKEKRS
Trigger: GCTTCTCTTTTCTTTCCACAAGGGACAAGAGCTTGG...AGGTGGACATCTGCATCTTCCATTGGTGGTCAAGGATGGGTGTGGGAGAACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp TTCAGGAAAGTGCGCCAGAGAGAGGACAGTAAGCCAGAGGGTACAAGGAGATGGATGTTCACTGAGGGCTaGTTTGGAAACTGGGAGGAA +
Preference number: 5 (lower is better)
Translates to: FRKVRQREDSKPEGTRRWMFTEG*FGNWEE
Trigger: TTCCTCCCAGTTTCCAAACAAGCCCTCAGTGAACAT...CCATCTCCTTGTACCCTCTGGCTTACTGTCCTCTCTCTGGCGCACTTTCCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp GTGGTTCTCCCACACCCATCCTTGACCACCAATGGAAGATGCAGATGTCCACCTTCATCTCCCAGGGCTTaGTGCATTTTCTCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: VVLPHPSLTTNGRCRCPPSSPRA*CIFSKR
Trigger: CCTCTTTGAGAAAATGCACAAAGCCCTGGGAGATGA...AGGTGGACATCTGCATCTTCCATTGGTGGTCAAGGATGGGTGTGGGAGAACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp TGCCCGTGGGCCTGGGGACCAGCTGAGAAGAAAAATGGAATCCTTCTCCCTGCAGATGTGACTTTTCAGTaGTCCAAGCTAGCATTTCTG +
Preference number: 5 (lower is better)
Translates to: CPWAWGPAEKKNGILLPADVTFQ*SKLAFL
Trigger: CAGAAATGCTAGCTTGGACAACTGAAAAGTCACATC...TGCAGGGAGAAGGATTCCATTTTTCTTCTCAGCTGGTCCCCAGGCCCACGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp CCGTGGGCCTGGGGACCAGCTGAGAAGAAAAATGGAATCCTTCTCCCTGCAGACGATGTGACTTTTCAGTaGTCCAAGCTAGCATTTCTG +
Preference number: 5 (lower is better)
Translates to: PWAWGPAEKKNGILLPADDVTFQ*SKLAFL
Trigger: CAGAAATGCTAGCTTGGACAACTGAAAAGTCACATC...GTCTGCAGGGAGAAGGATTCCATTTTTCTTCTCAGCTGGTCCCCAGGCCCACGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp CTAAGGAAGGACATGAGGACCCTGGGTAACTTTCATGGAACCCTGGATGAGATGTTCTGGCTCTCTGGCTaGGGGACCAATGCTCTTATC +
Preference number: 5 (lower is better)
Translates to: LRKDMRTLGNFHGTLDEMFWLSG*GTNALI
Trigger: GATAAGAGCATTGGTCCCCAAGCCAGAGAGCCAGAA...CATCTCATCCAGGGTTCCATGAAAGTTACCCAGGGTCCTCATGTCCTTCCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp AAGGACATGAGGACCCTGGGTAACTTTCATGGAACCCTGGATGAGATGGCAAGATTCTGGCTCTCTGGCTaGGGGACCAATGCTCTTATC +
Preference number: 5 (lower is better)
Translates to: KDMRTLGNFHGTLDEMARFWLSG*GTNALI
Trigger: GATAAGAGCATTGGTCCCCAAGCCAGAGAGCCAGAA...TCTTGCCATCTCATCCAGGGTTCCATGAAAGTTACCCAGGGTCCTCATGTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS TCA 90 bp GAAAAATGGAATCCTTCTCCCTGCAGACAGGCAGTCACGCTTCAATaGTGTTCACTGAGGGCTTGTTTGGAAACTTGCTGCGGAGAAGCC +
Preference number: 5 (lower is better)
Translates to: EKWNPSPCRQAVTLQ*CSLRACLETCCGEA
Trigger: GGCTTCTCCGCAGCAAGTTTCCAAACAAGCCCTCAGTGAACATCATTGAAGCGTGACTGCCTGTCTGCAGGGAGAAGGATTCCATTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481487.1
CDS-3UTR CAA 90 bp GAGTCAGTCCTTGTGCTTGTCATCTCCCAGGGCTTTGTGCATTTTCTCAAAGAGCAGCCACTGACATTGTaGAGGTGCTTCTGGAGATGG +
Preference number: 5 (lower is better)
Translates to: ESVLVLVISQGFVHFLKEQPLTL*RCFWRW
Trigger: CCATCTCCAGAAGCACCTCAACAATGTCAGTGGCTG...CTCTTTGAGAAAATGCACAAAGCCCTGGGAGATGACAAGCACAAGGACTGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp TTCAGGAAAGTGCGCCAGAGAGAGGACAGTAAGCCAGAGGGTACAAGGAGATGGGGATGTCTTGTCTTTTaGCCTTTTCAAACCCAGCCT +
Preference number: 5 (lower is better)
Translates to: FRKVRQREDSKPEGTRRWGCLVF*PFQTQP
Trigger: AGGCTGGGTTTGAAAAGGCAAAAAGACAAGACATCC...CCATCTCCTTGTACCCTCTGGCTTACTGTCCTCTCTCTGGCGCACTTTCCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp ACAATGAGTGGAGCCTCATGCCCTCCCATGAGGAAGCCCTTAGTATTGCTGACATCATCTCCCAGGGCTTaGTGCATTTTCTCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: TMSGASCPPMRKPLVLLTSSPRA*CIFSKR
Trigger: CCTCTTTGAGAAAATGCACAAAGCCCTGGGAGATGA...TGTCAGCAATACTAAGGGCTTCCTCATGGGAGGGCATGAGGCTCCACTCATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp TTCAGGAAAGTGCGCCAGAGAGAGGACAGTAAGCCAGAGGGTACAAGGAGATGGACCACAAACATGTCCTaGATGGCTGGATCCAGAAAA +
Preference number: 5 (lower is better)
Translates to: FRKVRQREDSKPEGTRRWTTNMS*MAGSRK
Trigger: TTTTCTGGATCCAGCCATCAAGGACATGTTTGTGGT...CCATCTCCTTGTACCCTCTGGCTTACTGTCCTCTCTCTGGCGCACTTTCCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp AGAGGATCCAAAATCAACTTGCAGTGTCCCTGTGTCACACAGGCAGCAGCCAAGATGGTTACCTCATCTTaGTTCTTGGAGGCCATCTTC +
Preference number: 5 (lower is better)
Translates to: RGSKINLQCPCVTQAAAKMVTSS*FLEAIF
Trigger: GAAGATGGCCTCCAAGAACAAAGATGAGGTAACCAT...CTTGGCTGCTGCCTGTGTGACACAGGGACACTGCAAGTTGATTTTGGATCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496770.1
CDS-3UTR CAA 90 bp AAGGACATGAGGACCCTGGGTAACTTTCATGGAACCCTGGATGAGATGGCAAGAATGTTCACTGAGGGCTaGTTTGGAAACTGGGAGGAA +
Preference number: 5 (lower is better)
Translates to: KDMRTLGNFHGTLDEMARMFTEG*FGNWEE
Trigger: TTCCTCCCAGTTTCCAAACAAGCCCTCAGTGAACAT...TCTTGCCATCTCATCCAGGGTTCCATGAAAGTTACCCAGGGTCCTCATGTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp TGCCCGTGGGCCTGGGGACCAGCTGAGAAGAAAAATGGAATCCTTCTCCCTGCATACTTCCTAAATAAATaGGACCAGTACCTTCCAAAC +
Preference number: 5 (lower is better)
Translates to: CPWAWGPAEKKNGILLPAYFLNK*DQYLPN
Trigger: GTTTGGAAGGTACTGGTCCAATTTATTTAGGAAGTA...TGCAGGGAGAAGGATTCCATTTTTCTTCTCAGCTGGTCCCCAGGCCCACGGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp AAGGACATGAGGACCCTGGGTAACTTTCATGGAACCCTGGATGAGATGGCAAGAATGGTTACCTCATCTTaGTTCTTGGAGGCCATCTTC +
Preference number: 5 (lower is better)
Translates to: KDMRTLGNFHGTLDEMARMVTSS*FLEAIF
Trigger: GAAGATGGCCTCCAAGAACAAAGATGAGGTAACCAT...TCTTGCCATCTCATCCAGGGTTCCATGAAAGTTACCCAGGGTCCTCATGTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp CTAAGGAAGGACATGAGGACCCTGGGTAACTTTCATGGAACCCTGGATGAGATGGAGAGGGCCAGATGTTaGTTGGATAATCATCATCAG +
Preference number: 5 (lower is better)
Translates to: LRKDMRTLGNFHGTLDEMERARC*LDNHHQ
Trigger: CTGATGATGATTATCCAACAAACATCTGGCCCTCTC...CATCTCATCCAGGGTTCCATGAAAGTTACCCAGGGTCCTCATGTCCTTCCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp TTGCAAAAGTGTGCATCACACCACAAACATGTCCTTGATGGCTGGATCCAGAAACAGCCACTGACATTGTaGAGGTGCTTCTGGAGATGG +
Preference number: 5 (lower is better)
Translates to: LQKCASHHKHVLDGWIQKQPLTL*RCFWRW
Trigger: CCATCTCCAGAAGCACCTCAACAATGTCAGTGGCTG...TTTCTGGATCCAGCCATCAAGGACATGTTTGTGGTGTGATGCACACTTTTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS-3UTR CAA 90 bp AACTTTCATGGAACCCTGGATGAGATGGCAAGATATGAAGACCCCAGAGGCCAGTACTTCCTAAATAAATaGGACCAGTACCTTCCAAAC +
Preference number: 5 (lower is better)
Translates to: NFHGTLDEMARYEDPRGQYFLNK*DQYLPN
Trigger: GTTTGGAAGGTACTGGTCCAATTTATTTAGGAAGTA...CTGGCCTCTGGGGTCTTCATATCTTGCCATCTCATCCAGGGTTCCATGAAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS TCA 72 bp GGCCTTGAGGTGCCTGACGGTGACGTTCACTGGGGCTaGGGGACTGTCCGCCTGCACCAGCGCGAAGCAGAC +
Preference number: 6 (lower is better)
Translates to: GLEVPDGDVHWG*GTVRLHQREAD
Trigger: GTCTGCTTCGCGCTGGTGCAGGCGGACAGTCCCTCAGCCCCAGTGAACGTCACCGTCAGGCACCTCAAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS CCA 72 bp CTGGGGCTGAGGGACTTGTCCTGGGAGAGCCTCAGCTaGGACCTCGACCCGTTTGGGAGAAGAGCCCCGGAG +
Preference number: 6 (lower is better)
Translates to: LGLRDLSWESLS*DLDPFGRRAPE
Trigger: CTCCGGGGCTCTTCTCCCAAACGGGTCGAGGTCCCAGCTGAGGCTCTCCCAGGACAAGTCCCTCAGCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496770.1
CDS CCA 72 bp CTCACGCGGGGTCTTGAAGAGCACAGGCTCGCTGGCTaGGCTCTGGCCCTGAATGGAGATGGCCTGCACGTG +
Preference number: 6 (lower is better)
Translates to: LTRGLEEHRLAG*ALALNGDGLHV
Trigger: CACGTGCAGGCCATCTCCATTCAGGGCCAGAGCCCAGCCAGCGAGCCTGTGCTCTTCAAGACCCCGCGTGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373471.9
ENST00000496770.1
ENST00000649537.2
CDS CCA 72 bp GTCCTGGGAGAGCCTCAGCTGGGACCTCGACCCGTTTaGGAGAAGAGCCCCGGAGCCAGAGCACCTCTCTCT +
Preference number: 6 (lower is better)
Translates to: VLGEPQLGPRPV*EKSPGARAPLS
Trigger: AGAGAGAGGTGCTCTGGCTCCGGGGCTCTTCTCCCAAACGGGTCGAGGTCCCAGCTGAGGCTCTCCCAGGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465346.1
ENST00000496770.1
CDS CAA 72 bp TGTCCTGGGAGAGCCTCAGCTGGGACCTCGACCCGTTaGGGAGAAGAGCCCCGGAGCCAGAGCACCTCTCTC +
Preference number: 6 (lower is better)
Translates to: CPGRASAGTSTR*GEEPRSQSTSL
Trigger: GAGAGAGGTGCTCTGGCTCCGGGGCTCTTCTCCCAAACGGGTCGAGGTCCCAGCTGAGGCTCTCCCAGGACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465346.1
ENST00000496770.1
CDS GCA 72 bp ACATCCCAGCTCACCACTGCAGAGTTGGCCTTGAGGTaGCTGACGGTGACGTTCACTGGGGCTGAGGGACTG +
Preference number: 6 (lower is better)
Translates to: TSQLTTAELALR*LTVTFTGAEGL
Trigger: CAGTCCCTCAGCCCCAGTGAACGTCACCGTCAGGCACCTCAAGGCCAACTCTGCAGTGGTGAGCTGGGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS CCA 72 bp CAGGCTCGCTGGCTGGGCTCTGGCCCTGAATGGAGATaGCCTGCACGTGGACTATGTACTCCGTATCCTCCT +
Preference number: 6 (lower is better)
Translates to: QARWLGSGPEWR*PARGLCTPYPP
Trigger: AGGAGGATACGGAGTACATAGTCCACGTGCAGGCCATCTCCATTCAGGGCCAGAGCCCAGCCAGCGAGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373471.9
ENST00000496770.1
ENST00000649537.2
CDS CAA 90 bp ACCTCATCCTCCAGAACATCCCAGCTCACCACTGCAGAGTTGGCCTaGAGGTGCCTGACGGTGACGTTCACTGGGGCTGAGGGACTGTCC +
Preference number: 6 (lower is better)
Translates to: TSSSRTSQLTTAELA*RCLTVTFTGAEGLS
Trigger: GGACAGTCCCTCAGCCCCAGTGAACGTCACCGTCAGGCACCTCAAGGCCAACTCTGCAGTGGTGAGCTGGGATGTTCTGGAGGATGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2
CDS GCA 72 bp ACATCCCAGCTCACCACTGCAGAGTTGGCCTTGAGGTaGCTGACGGTGACGTTCACTGGGGCTGAGGGACTT +
Preference number: 6 (lower is better)
Translates to: TSQLTTAELALR*LTVTFTGAEGL
Trigger: AAGTCCCTCAGCCCCAGTGAACGTCACCGTCAGGCACCTCAAGGCCAACTCTGCAGTGGTGAGCTGGGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496770.1
CDS CAA 90 bp ACCTCATCCTCCAGAACATCCCAGCTCACCACTGCAGAGTTGGCCTaGAGGTGCCTGACGGTGACGTTCACTGGGGCTGAGGGACTTGTC +
Preference number: 6 (lower is better)
Translates to: TSSSRTSQLTTAELA*RCLTVTFTGAEGLV
Trigger: GACAAGTCCCTCAGCCCCAGTGAACGTCACCGTCAGGCACCTCAAGGCCAACTCTGCAGTGGTGAGCTGGGATGTTCTGGAGGATGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496770.1
CDS CAA 90 bp ATGACAACCTCATCCTCCAGAACATCCCAGCTCACCACTGCAGAGTaGGCCTTGAGGTGCCTGACGGTGACGTTCACTGGGGCTGAGGGA +
Preference number: 6 (lower is better)
Translates to: MTTSSSRTSQLTTAE*ALRCLTVTFTGAEG
Trigger: TCCCTCAGCCCCAGTGAACGTCACCGTCAGGCACCTCAAGGCCAACTCTGCAGTGGTGAGCTGGGATGTTCTGGAGGATGAGGTTGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373471.9
ENST00000496770.1
ENST00000649537.2
CDS GCA 72 bp GACAACCTCATCCTCCAGAACATCCCAGCTCACCACTaGAGAGTTGGCCTTGAGGTGCCTGACGGTGACGTT +
Preference number: 6 (lower is better)
Translates to: DNLILQNIPAHH*RVGLEVPDGDV
Trigger: AACGTCACCGTCAGGCACCTCAAGGCCAACTCTGCAGTGGTGAGCTGGGATGTTCTGGAGGATGAGGTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373471.9
ENST00000496770.1
ENST00000649537.2
CDS TCA 72 bp CTACTGTCTGTCTTCTTAGCTGCTGAGGGCAAGCACTaGAAAGGTTTTCATATCTTGCTGCGGAGAAGCCCC +
Preference number: 6 (lower is better)
Translates to: LLSVFLAAEGKH*KGFHILLRRSP
Trigger: GGGGCTTCTCCGCAGCAAGATATGAAAACCTTTTCAGTGCTTGCCCTCAGCAGCTAAGAAGACAGACAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373471.9
ENST00000649537.2