Pregenerated sensors for FNDC4 (Homo sapiens)
Ensembl gene IDs: ENSG00000115226Ensembl transcript IDs: ENST00000264703.4, ENST00000476197.1, ENST00000491414.5
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCACAGTGGAAAGAGGATGGGTACCAGGCCTGAGATTGTGGGAGTaGCATTACCCTCTGGGAGTCTCGGGCAGATCACCATCTTGGGCT | + |
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Preference number: 1 (lower is better) Translates to: LTVERGWVPGLRLWE*HYPLGVSGRSPSWA Trigger: AGCCCAAGATGGTGATCTGCCCGAGACTCCCAGAGGGTAATGCCACTCCCACAATCTCAGGCCTGGTACCCATCCTCTTTCCACTGTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| 3UTR CCA 90 bp | TCTGAACAGACCTACCTTCTGGCTCTGCTCACAGTGGAAAGAGGATaGGTACCAGGCCTGAGATTGTGGGAGTGGCATTACCCTCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: SEQTYLLALLTVERG*VPGLRLWEWHYPLG Trigger: TCCCAGAGGGTAATGCCACTCCCACAATCTCAGGCCTGGTACCCATCCTCTTTCCACTGTGAGCAGAGCCAGAAGGTAGGTCTGTTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| 3UTR TCA 90 bp | ATATCCCATCTGATATCCACTCCCCAGGTCCAGGGGCACAGACTCTaGACAGACCTACCTTCTGGCTCTGCTCACAGTGGAAAGAGGATG | + |
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Preference number: 1 (lower is better) Translates to: ISHLISTPQVQGHRL*TDLPSGSAHSGKRM Trigger: CATCCTCTTTCCACTGTGAGCAGAGCCAGAAGGTAGGTCTGTTCAGAGTCTGTGCCCCTGGACCTGGGGAGTGGATATCAGATGGGATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| 3UTR TCA 90 bp | AATGTCCAACAAGTGATATCACTAGCAGCTGAAGGGGCTGCCAGGTaGGAGGGGGAGCACCTGAGGCTCCATGGAAGACATTGGAGTAGT | + |
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Preference number: 1 (lower is better) Translates to: NVQQVISLAAEGAAR*EGEHLRLHGRHWSS Trigger: ACTACTCCAATGTCTTCCATGGAGCCTCAGGTGCTCCCCCTCTCACCTGGCAGCCCCTTCAGCTGCTAGTGATATCACTTGTTGGACATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| 3UTR CAA 90 bp | CTGGCTCTGCTCACAGTGGAAAGAGGATGGGTACCAGGCCTGAGATaGTGGGAGTGGCATTACCCTCTGGGAGTCTCGGGCAGATCACCA | + |
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Preference number: 2 (lower is better) Translates to: LALLTVERGWVPGLR*WEWHYPLGVSGRSP Trigger: TGGTGATCTGCCCGAGACTCCCAGAGGGTAATGCCACTCCCACAATCTCAGGCCTGGTACCCATCCTCTTTCCACTGTGAGCAGAGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| 3UTR-3UTR CCA 90 bp | GGGATGCTCAGAGTCCTGATACAGGTGAAATGGGGCCCCCATTTGGGACCTAATGGCAGATCACCATCTTaGGCTCCCCCTGACCCCATC | + |
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Preference number: 2 (lower is better) Translates to: GMLRVLIQVKWGPHLGPNGRSPS*APPDPI Trigger: GATGGGGTCAGGGGGAGCCCAAGATGGTGATCTGCC...ATTAGGTCCCAAATGGGGGCCCCATTTCACCTGTATCAGGACTCTGAGCATCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| 3UTR-3UTR TCA 90 bp | CTGGACCGGGGAATGGAAGGAGATATCCCATCTGATATCCACTCCCCAGGTCCAGATGGGTACCAGGCCTaGGATTGTGGGAGTGGCATT | + |
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Preference number: 2 (lower is better) Translates to: LDRGMEGDIPSDIHSPGPDGYQA*DCGSGI Trigger: AATGCCACTCCCACAATCTCAGGCCTGGTACCCATC...TGGACCTGGGGAGTGGATATCAGATGGGATATCTCCTTCCATTCCCCGGTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| 3UTR-3UTR CCA 90 bp | ACCGGGGAATGGAAGGAGATATCCCATCTGATATCCACTCCCCAGGTCCAGGGGACAGTGGAAAGAGGATaGGTACCAGGCCTGAGATTG | + |
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Preference number: 2 (lower is better) Translates to: TGEWKEISHLISTPQVQGTVERG*VPGLRL Trigger: CAATCTCAGGCCTGGTACCCATCCTCTTTCCACTGT...CCCCTGGACCTGGGGAGTGGATATCAGATGGGATATCTCCTTCCATTCCCCGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| 3UTR-3UTR TCA 90 bp | AGACATTGGAGTAGTGCAGTGCAGCATCTGCCTCTAGGGTCAGACAATTCCTTTCAGGGGCACAGACTCTaGACAGACCTACCTTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: RHWSSAVQHLPLGSDNSFQGHRL*TDLPSG Trigger: GCCAGAAGGTAGGTCTGTTCAGAGTCTGTGCCCCTG...AAAGGAATTGTCTGACCCTAGAGGCAGATGCTGCACTGCACTACTCCAATGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| 3UTR-3UTR CCA 90 bp | AACCTTTATTGGAAAAATGTCCAACAAGTGATATCACTAGCAGCTGAAGGGGCTCCAGGCCTGAGATTGTaGGAGTGGCATTACCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: NLYWKNVQQVISLAAEGAPGLRL*EWHYPL Trigger: CAGAGGGTAATGCCACTCCCACAATCTCAGGCCTGG...AGCCCCTTCAGCTGCTAGTGATATCACTTGTTGGACATTTTTCCAATAAAGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| 3UTR TCA 72 bp | CAGCTGAAGGGGCTGCCAGGTGAGAGGGGGAGCACCTaGGGCTCCATGGAAGACATTGGAGTAGTGCAGTGC | + |
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Preference number: 3 (lower is better) Translates to: QLKGLPGERGST*GSMEDIGVVQC Trigger: GCACTGCACTACTCCAATGTCTTCCATGGAGCCTCAGGTGCTCCCCCTCTCACCTGGCAGCCCCTTCAGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| 3UTR TCA 72 bp | CAAGTGATATCACTAGCAGCTGAAGGGGCTGCCAGGTaGGAGGGGGAGCACCTGAGGCTCCATGGAAGACAT | + |
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Preference number: 3 (lower is better) Translates to: QVISLAAEGAAR*EGEHLRLHGRH Trigger: ATGTCTTCCATGGAGCCTCAGGTGCTCCCCCTCTCACCTGGCAGCCCCTTCAGCTGCTAGTGATATCACTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| 3UTR-3UTR CAA 90 bp | GGGATGCTCAGAGTCCTGATACAGGTGAAATGGGGCCCCCATTTGGGACCTAATCATCCCTATCCCCAGTaGTTAGTGCATCTCTCTTCT | + |
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Preference number: 3 (lower is better) Translates to: GMLRVLIQVKWGPHLGPNHPYPQ*LVHLSS Trigger: AGAAGAGAGATGCACTAACAACTGGGGATAGGGATG...ATTAGGTCCCAAATGGGGGCCCCATTTCACCTGTATCAGGACTCTGAGCATCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR TCA 90 bp | ATTGTGGGAGTGGCATTACCCTCTGGGAGTCTCGGGCAGATCACCATCTTGGGCCCCTGCAGCGGGATGTaGCCGTCCCGGAGAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: IVGVALPSGSLGQITILGPCSGM*PSRRAS Trigger: GCTGGCTCTCCGGGACGGTCACATCCCGCTGCAGGG...GCCCAAGATGGTGATCTGCCCGAGACTCCCAGAGGGTAATGCCACTCCCACAAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR GCA 90 bp | CTGCTCACAGTGGAAAGAGGATGGGTACCAGGCCTGAGATTGTGGGAGTGGCATGGGAGCAGGGGGCGTTaGCCGGACGCTGGCCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: LLTVERGWVPGLRLWEWHGSRGR*PDAGLG Trigger: ACCCAGGCCAGCGTCCGGGCAACGCCCCCTGCTCCC...ATGCCACTCCCACAATCTCAGGCCTGGTACCCATCCTCTTTCCACTGTGAGCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR GCA 90 bp | ACCCTCTGGGAGTCTCGGGCAGATCACCATCTTGGGCTCCCCCTGACCCCATCCACCACTTCCCCAGTCTaGAGTGGCCGCTCTCCATCC | + |
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Preference number: 4 (lower is better) Translates to: TLWESRADHHLGLPLTPSTTSPV*SGRSPS Trigger: GGATGGAGAGCGGCCACTGCAGACTGGGGAAGTGGT...GGATGGGGTCAGGGGGAGCCCAAGATGGTGATCTGCCCGAGACTCCCAGAGGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR CCA 90 bp | ACCCTCTGGGAGTCTCGGGCAGATCACCATCTTGGGCTCCCCCTGACCCCATCCGGCAGATCACCATCTTaGGCTCCCCCTGACCCCATC | + |
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Preference number: 4 (lower is better) Translates to: TLWESRADHHLGLPLTPSGRSPS*APPDPI Trigger: GATGGGGTCAGGGGGAGCCCAAGATGGTGATCTGCC...GGATGGGGTCAGGGGGAGCCCAAGATGGTGATCTGCCCGAGACTCCCAGAGGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR TCA 90 bp | CTGGACCGGGGAATGGAAGGAGATATCCCATCTGATATCCACTCCCCAGGTCCACCCACTGGCCTTCCCTaGGGACTCTGTTCCGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: LDRGMEGDIPSDIHSPGPPTGLP*GLCSGP Trigger: GGGGCCGGAACAGAGTCCTCAGGGAAGGCCAGTGGG...TGGACCTGGGGAGTGGATATCAGATGGGATATCTCCTTCCATTCCCCGGTCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR CCA 90 bp | ACAGACCTACCTTCTGGCTCTGCTCACAGTGGAAAGAGGATGGGTACCAGGCCTCATCGCCCGACTCGGTaGCGCTGCCCCTACCCCATC | + |
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Preference number: 4 (lower is better) Translates to: TDLPSGSAHSGKRMGTRPHRPTR*RCPYPI Trigger: GATGGGGTAGGGGCAGCGCCACCGAGTCGGGCGATG...AGGCCTGGTACCCATCCTCTTTCCACTGTGAGCAGAGCCAGAAGGTAGGTCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR TCA 90 bp | CTGCTCACAGTGGAAAGAGGATGGGTACCAGGCCTGAGATTGTGGGAGTGGCATAGCCCAGGTCACAGCTaGCCAGCAGGAGGACCGTGG | + |
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Preference number: 4 (lower is better) Translates to: LLTVERGWVPGLRLWEWHSPGHS*PAGGPW Trigger: CCACGGTCCTCCTGCTGGTCAGCTGTGACCTGGGCT...ATGCCACTCCCACAATCTCAGGCCTGGTACCCATCCTCTTTCCACTGTGAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR GCA 90 bp | AGTGCAGTGCAGCATCTGCCTCTAGGGTCAGACAATTCCTTTTATTTGCTGGGGCCGACTCGGTGGCGCTaGCCCTACCCCATCCCGGCG | + |
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Preference number: 4 (lower is better) Translates to: SAVQHLPLGSDNSFYLLGPTRWR*PYPIPA Trigger: CGCCGGGATGGGGTAGGGGCAGCGCCACCGAGTCGG...CCCCAGCAAATAAAAGGAATTGTCTGACCCTAGAGGCAGATGCTGCACTGCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR CCA 90 bp | GGAAAGAGGATGGGTACCAGGCCTGAGATTGTGGGAGTGGCATTACCCTCTGGGTTCCCCAGTCTGCAGTaGCCGCTCTCCATCCAGACC | + |
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Preference number: 4 (lower is better) Translates to: GKRMGTRPEIVGVALPSGFPSLQ*PLSIQT Trigger: GGTCTGGATGGAGAGCGGCCACTGCAGACTGGGGAA...CCCAGAGGGTAATGCCACTCCCACAATCTCAGGCCTGGTACCCATCCTCTTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR TCA 90 bp | ACCCTCTGGGAGTCTCGGGCAGATCACCATCTTGGGCTCCCCCTGACCCCATCCAAATGGAGTAGCCAATaGCGATGTTGCCTTCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: TLWESRADHHLGLPLTPSKWSSQ*RCCLLG Trigger: TCCCAGAAGGCAACATCGTCATTGGCTACTCCATTT...GGATGGGGTCAGGGGGAGCCCAAGATGGTGATCTGCCCGAGACTCCCAGAGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR TCA 90 bp | TTTGCTGGGGTAAGAGGAGTACCCACAGAAACACCCCTCTCTGAGGGCCAGAGGGAAGGCCGATGCTCCTaGCCTGCACTGTGTAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: FAGVRGVPTETPLSEGQREGRCS*PALCSH Trigger: GTGACTACACAGTGCAGGTCAGGAGCATCGGCCTTC...CCTCTGGCCCTCAGAGAGGGGTGTTTCTGTGGGTACTCCTCTTACCCCAGCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR CCA 90 bp | TGTGGGAGTGGCATTACCCTCTGGGAGTCTCGGGCAGATCACCATCTTGGGCTCCCAGGCCTGAGATTGTaGGAGTGGCATTACCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: CGSGITLWESRADHHLGLPGLRL*EWHYPL Trigger: CAGAGGGTAATGCCACTCCCACAATCTCAGGCCTGG...GAGCCCAAGATGGTGATCTGCCCGAGACTCCCAGAGGGTAATGCCACTCCCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR CCA 90 bp | GCTCTGCTCACAGTGGAAAGAGGATGGGTACCAGGCCTGAGATTGTGGGAGTGGCTAGTGACTCTCCCCTaGACCGGGGAATGGAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: ALLTVERGWVPGLRLWEWLVTLP*TGEWKE Trigger: CTCCTTCCATTCCCCGGTCCAGGGGAGAGTCACTAG...CCACTCCCACAATCTCAGGCCTGGTACCCATCCTCTTTCCACTGTGAGCAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| 3UTR CAA 72 bp | CTCACAGTGGAAAGAGGATGGGTACCAGGCCTGAGATaGTGGGAGTGGCATTACCCTCTGGGAGTCTCGGGC | + |
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Preference number: 4 (lower is better) Translates to: LTVERGWVPGLR*WEWHYPLGVSG Trigger: GCCCGAGACTCCCAGAGGGTAATGCCACTCCCACAATCTCAGGCCTGGTACCCATCCTCTTTCCACTGTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR TCA 90 bp | ACAGACCTACCTTCTGGCTCTGCTCACAGTGGAAAGAGGATGGGTACCAGGCCTCAGGGGCACAGACTCTaGACAGACCTACCTTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: TDLPSGSAHSGKRMGTRPQGHRL*TDLPSG Trigger: GCCAGAAGGTAGGTCTGTTCAGAGTCTGTGCCCCTG...AGGCCTGGTACCCATCCTCTTTCCACTGTGAGCAGAGCCAGAAGGTAGGTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR TCA 90 bp | GGCTCTGCTCACAGTGGAAAGAGGATGGGTACCAGGCCTGAGATTGTGGGAGTGGATATCACTAGCAGCTaGAGGGGCTGCCAGGTGAGA | + |
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Preference number: 4 (lower is better) Translates to: GSAHSGKRMGTRPEIVGVDITSS*RGCQVR Trigger: TCTCACCTGGCAGCCCCTTCAGCTGCTAGTGATATC...CACTCCCACAATCTCAGGCCTGGTACCCATCCTCTTTCCACTGTGAGCAGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR CCA 90 bp | ACCGGGGAATGGAAGGAGATATCCCATCTGATATCCACTCCCCAGGTCCAGGGGCCAGCAGGAGGACCGTaGGGCTTAGATATGGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: TGEWKEISHLISTPQVQGPAGGP*GLDMGK Trigger: TTTCCCCATATCTAAGCCCCACGGTCCTCCTGCTGG...CCCCTGGACCTGGGGAGTGGATATCAGATGGGATATCTCCTTCCATTCCCCGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR CCA 90 bp | GGAAAGAGGATGGGTACCAGGCCTGAGATTGTGGGAGTGGCATTACCCTCTGGGGACGATGTTGCCTTCTaGGACGTCCCAGGACACAGT | + |
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Preference number: 4 (lower is better) Translates to: GKRMGTRPEIVGVALPSGDDVAF*DVPGHS Trigger: ACTGTGTCCTGGGACGTCCCAGAAGGCAACATCGTC...CCCAGAGGGTAATGCCACTCCCACAATCTCAGGCCTGGTACCCATCCTCTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR CCA 90 bp | AGGCTCCATGGAAGACATTGGAGTAGTGCAGTGCAGCATCTGCCTCTAGGGTCAGCCAGAGGCAAGATGTaGGGCAGCTGGGGATGCTCA | + |
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Preference number: 4 (lower is better) Translates to: RLHGRHWSSAVQHLPLGSARGKM*GSWGCS Trigger: TGAGCATCCCCAGCTGCCCCACATCTTGCCTCTGGC...TGACCCTAGAGGCAGATGCTGCACTGCACTACTCCAATGTCTTCCATGGAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR GCA 90 bp | AGTGCAGTGCAGCATCTGCCTCTAGGGTCAGACAATTCCTTTTATTTGCTGGGGTCCCGAATCACACGCTaGCCGGGGCCATTCTGCCGT | + |
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Preference number: 4 (lower is better) Translates to: SAVQHLPLGSDNSFYLLGSRITR*PGPFCR Trigger: ACGGCAGAATGGCCCCGGGCAGCGTGTGATTCGGGA...CCCCAGCAAATAAAAGGAATTGTCTGACCCTAGAGGCAGATGCTGCACTGCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR CCA 90 bp | CTGGACCGGGGAATGGAAGGAGATATCCCATCTGATATCCACTCCCCAGGTCCAACTGTGGCATCCGCTTaGCATCCGCTTGACATCCAG | + |
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Preference number: 4 (lower is better) Translates to: LDRGMEGDIPSDIHSPGPTVASA*HPLDIQ Trigger: CTGGATGTCAAGCGGATGCCAAGCGGATGCCACAGT...TGGACCTGGGGAGTGGATATCAGATGGGATATCTCCTTCCATTCCCCGGTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR CCA 90 bp | TTTGCTGGGGTAAGAGGAGTACCCACAGAAACACCCCTCTCTGAGGGCCAGAGGTGGCTCTGCTCACAGTaGAAAGAGGATGGGTACCAG | + |
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Preference number: 4 (lower is better) Translates to: FAGVRGVPTETPLSEGQRWLCSQ*KEDGYQ Trigger: CTGGTACCCATCCTCTTTCCACTGTGAGCAGAGCCA...CCTCTGGCCCTCAGAGAGGGGTGTTTCTGTGGGTACTCCTCTTACCCCAGCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR CCA 90 bp | GGCTCTGCTCACAGTGGAAAGAGGATGGGTACCAGGCCTGAGATTGTGGGAGTGCTGATACAGGTGAAATaGGGCCCCCATTTGGGACCT | + |
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Preference number: 4 (lower is better) Translates to: GSAHSGKRMGTRPEIVGVLIQVK*GPHLGP Trigger: AGGTCCCAAATGGGGGCCCCATTTCACCTGTATCAG...CACTCCCACAATCTCAGGCCTGGTACCCATCCTCTTTCCACTGTGAGCAGAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR GCA 90 bp | AGACATTGGAGTAGTGCAGTGCAGCATCTGCCTCTAGGGTCAGACAATTCCTTTTTGAGAGTTCGGAAGTaGACCCGGGGCCCTGGGGGA | + |
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Preference number: 4 (lower is better) Translates to: RHWSSAVQHLPLGSDNSFLRVRK*TRGPGG Trigger: TCCCCCAGGGCCCCGGGTGCACTTCCGAACTCTCAA...AAAGGAATTGTCTGACCCTAGAGGCAGATGCTGCACTGCACTACTCCAATGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR CCA 90 bp | GGGATGCTCAGAGTCCTGATACAGGTGAAATGGGGCCCCCATTTGGGACCTAATAGTGGCATTACCCTCTaGGAGTCTCGGGCAGATCAC | + |
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Preference number: 4 (lower is better) Translates to: GMLRVLIQVKWGPHLGPNSGITL*ESRADH Trigger: GTGATCTGCCCGAGACTCCCAGAGGGTAATGCCACT...ATTAGGTCCCAAATGGGGGCCCCATTTCACCTGTATCAGGACTCTGAGCATCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR TCA 90 bp | TGCAGTGCAGCATCTGCCTCTAGGGTCAGACAATTCCTTTTATTTGCTGGGGTAGCCGGTCAGAACCCTTaGGAGTTCGGAAGTGCACCC | + |
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Preference number: 4 (lower is better) Translates to: CSAASASRVRQFLLFAGVAGQNP*EFGSAP Trigger: GGGTGCACTTCCGAACTCTCAAGGGTTCTGACCGGC...TACCCCAGCAAATAAAAGGAATTGTCTGACCCTAGAGGCAGATGCTGCACTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR TCA 90 bp | ATGCTCAGAGTCCTGATACAGGTGAAATGGGGCCCCCATTTGGGACCTAATGGAGATGGGTACCAGGCCTaGGATTGTGGGAGTGGCATT | + |
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Preference number: 4 (lower is better) Translates to: MLRVLIQVKWGPHLGPNGDGYQA*DCGSGI Trigger: AATGCCACTCCCACAATCTCAGGCCTGGTACCCATC...TCCATTAGGTCCCAAATGGGGGCCCCATTTCACCTGTATCAGGACTCTGAGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR CCA 90 bp | CTAGTGACTCTCCCCTGGACCGGGGAATGGAAGGAGATATCCCATCTGATATCCCTGAGATTGTGGGAGTaGCATTACCCTCTGGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: LVTLPWTGEWKEISHLISLRLWE*HYPLGV Trigger: GACTCCCAGAGGGTAATGCCACTCCCACAATCTCAG...GGATATCAGATGGGATATCTCCTTCCATTCCCCGGTCCAGGGGAGAGTCACTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR CCA 90 bp | ATTGTGGGAGTGGCATTACCCTCTGGGAGTCTCGGGCAGATCACCATCTTGGGCCTCCATGGAAGACATTaGAGTAGTGCAGTGCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: IVGVALPSGSLGQITILGLHGRH*SSAVQH Trigger: ATGCTGCACTGCACTACTCCAATGTCTTCCATGGAG...GCCCAAGATGGTGATCTGCCCGAGACTCCCAGAGGGTAATGCCACTCCCACAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR TCA 90 bp | ATGCTCAGAGTCCTGATACAGGTGAAATGGGGCCCCCATTTGGGACCTAATGGAGAGTTGGCTCTGAGGTaGGTGACCGTCACATTCACA | + |
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Preference number: 4 (lower is better) Translates to: MLRVLIQVKWGPHLGPNGELALR*VTVTFT Trigger: TGTGAATGTGACGGTCACTCACCTCAGAGCCAACTC...TCCATTAGGTCCCAAATGGGGGCCCCATTTCACCTGTATCAGGACTCTGAGCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR CCA 90 bp | GGGATGCTCAGAGTCCTGATACAGGTGAAATGGGGCCCCCATTTGGGACCTAATACAGTGGAAAGAGGATaGGTACCAGGCCTGAGATTG | + |
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Preference number: 4 (lower is better) Translates to: GMLRVLIQVKWGPHLGPNTVERG*VPGLRL Trigger: CAATCTCAGGCCTGGTACCCATCCTCTTTCCACTGT...ATTAGGTCCCAAATGGGGGCCCCATTTCACCTGTATCAGGACTCTGAGCATCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR CCA 90 bp | CTGCTCACAGTGGAAAGAGGATGGGTACCAGGCCTGAGATTGTGGGAGTGGCATATTCCTTTTATTTGCTaGGGTAAGAGGAGTACCCAC | + |
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Preference number: 4 (lower is better) Translates to: LLTVERGWVPGLRLWEWHIPFIC*GKRSTH Trigger: GTGGGTACTCCTCTTACCCCAGCAAATAAAAGGAAT...ATGCCACTCCCACAATCTCAGGCCTGGTACCCATCCTCTTTCCACTGTGAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR CCA 90 bp | GGAAAGAGGATGGGTACCAGGCCTGAGATTGTGGGAGTGGCATTACCCTCTGGGTCCAAGAACCTTTATTaGAAAAATGTCCAACAAGTG | + |
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Preference number: 4 (lower is better) Translates to: GKRMGTRPEIVGVALPSGSKNLY*KNVQQV Trigger: CACTTGTTGGACATTTTTCCAATAAAGGTTCTTGGA...CCCAGAGGGTAATGCCACTCCCACAATCTCAGGCCTGGTACCCATCCTCTTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR TCA 90 bp | AGACATTGGAGTAGTGCAGTGCAGCATCTGCCTCTAGGGTCAGACAATTCCTTTGGTGTTGATAGATGGTaGCTTTTTCTGTCTTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: RHWSSAVQHLPLGSDNSFGVDRW*LFLSCP Trigger: GGGACAAGACAGAAAAAGTCACCATCTATCAACACC...AAAGGAATTGTCTGACCCTAGAGGCAGATGCTGCACTGCACTACTCCAATGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR CCA 90 bp | AGACATTGGAGTAGTGCAGTGCAGCATCTGCCTCTAGGGTCAGACAATTCCTTTAGTGCATCTCTCTTCTaGGTGTGTTTCTTCACTCAA | + |
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Preference number: 4 (lower is better) Translates to: RHWSSAVQHLPLGSDNSFSASLF*VCFFTQ Trigger: TTGAGTGAAGAAACACACCCAGAAGAGAGATGCACT...AAAGGAATTGTCTGACCCTAGAGGCAGATGCTGCACTGCACTACTCCAATGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS GCA 90 bp | GGGCGTTGCCCGGACGCTGGCCTGGGTCCCCGGTGCGGGAGGCAGTaGGGCGGCCTCCGCCCGCCCCTGCAGCGGGATGTGACCGTCCCG | + |
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Preference number: 5 (lower is better) Translates to: GRCPDAGLGPRCGRQ*GGLRPPLQRDVTVP Trigger: CGGGACGGTCACATCCCGCTGCAGGGGCGGGCGGAGGCCGCCGCACTGCCTCCCGCACCGGGGACCCAGGCCAGCGTCCGGGCAACGCCC 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS CCA 90 bp | CACGGAGTCTGTCCGGGAGCAGGGGGCGTTGCCCGGACGCTGGCCTaGGTCCCCGGTGCGGGAGGCAGTGCGGCGGCCTCCGCCCGCCCC | + |
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Preference number: 5 (lower is better) Translates to: HGVCPGAGGVARTLA*VPGAGGSAAASARP Trigger: GGGGCGGGCGGAGGCCGCCGCACTGCCTCCCGCACCGGGGACCCAGGCCAGCGTCCGGGCAACGCCCCCTGCTCCCGGACAGACTCCGTG 80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000264703.4 ENST00000491414.5 |
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| CDS CCA 90 bp | CGGGCCACGGAGTCTGTCCGGGAGCAGGGGGCGTTGCCCGGACGCTaGCCTGGGTCCCCGGTGCGGGAGGCAGTGCGGCGGCCTCCGCCC | + |
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Preference number: 5 (lower is better) Translates to: RATESVREQGALPGR*PGSPVREAVRRPPP Trigger: GGGCGGAGGCCGCCGCACTGCCTCCCGCACCGGGGACCCAGGCCAGCGTCCGGGCAACGCCCCCTGCTCCCGGACAGACTCCGTGGCCCG 80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000264703.4 ENST00000491414.5 |
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| CDS GCA 90 bp | CAGGGCTCGAGCGGGCCACGGAGTCTGTCCGGGAGCAGGGGGCGTTaGCCGGACGCTGGCCTGGGTCCCCGGTGCGGGAGGCAGTGCGGC | + |
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Preference number: 5 (lower is better) Translates to: QGSSGPRSLSGSRGR*PDAGLGPRCGRQCG Trigger: GCCGCACTGCCTCCCGCACCGGGGACCCAGGCCAGCGTCCGGGCAACGCCCCCTGCTCCCGGACAGACTCCGTGGCCCGCTCGAGCCCTG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000264703.4 ENST00000491414.5 |
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| CDS TCA 90 bp | CCTTCTGGGACGTCCCAGGACACAGTGGCCGAGTTGGCTCTGAGGTaGGTGACCGTCACATTCACAGGAGAGGGAGGCCGGTCTGCTCGC | + |
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Preference number: 5 (lower is better) Translates to: PSGTSQDTVAELALR*VTVTFTGEGGRSAR Trigger: GCGAGCAGACCGGCCTCCCTCTCCTGTGAATGTGACGGTCACTCACCTCAGAGCCAACTCGGCCACTGTGTCCTGGGACGTCCCAGAAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000264703.4 ENST00000476197.1 ENST00000491414.5 |
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| CDS-3UTR CAA 90 bp | ACCCTCTGGGAGTCTCGGGCAGATCACCATCTTGGGCTCCCCCTGACCCCATCCAGCCGGTCAGAACCCTaGAGAGTTCGGAAGTGCACC | + |
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Preference number: 5 (lower is better) Translates to: TLWESRADHHLGLPLTPSSRSEP*RVRKCT Trigger: GGTGCACTTCCGAACTCTCAAGGGTTCTGACCGGCT...GGATGGGGTCAGGGGGAGCCCAAGATGGTGATCTGCCCGAGACTCCCAGAGGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS TCA 90 bp | TGTCACCTGGGCTTGAACTGTTTGAAGGTAGCCGGTCAGAACCCTTaGGAGTTCGGAAGTGCACCCGGGGCCCTGGGGGACTCTCTCCCC | + |
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Preference number: 5 (lower is better) Translates to: CHLGLNCLKVAGQNP*EFGSAPGALGDSLP Trigger: GGGGAGAGAGTCCCCCAGGGCCCCGGGTGCACTTCCGAACTCTCAAGGGTTCTGACCGGCTACCTTCAAACAGTTCAAGCCCAGGTGACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000264703.4 ENST00000476197.1 ENST00000491414.5 |
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| CDS-3UTR CAA 90 bp | ACCGGGGAATGGAAGGAGATATCCCATCTGATATCCACTCCCCAGGTCCAGGGGGGGGCCATTCTGCCGTaGCTGGGAAATGGAGTAGCC | + |
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Preference number: 5 (lower is better) Translates to: TGEWKEISHLISTPQVQGGAILP*LGNGVA Trigger: GGCTACTCCATTTCCCAGCAACGGCAGAATGGCCCC...CCCCTGGACCTGGGGAGTGGATATCAGATGGGATATCTCCTTCCATTCCCCGGT 59% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS TCA 90 bp | TCAACCAGAGACTCTTCAACATCCAAGCACTCCGGGGGAGTAGCGTaGAAAGGGCAGCCTGAGCCAGGATACGCCAGCTTCCAGATCCCC | + |
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Preference number: 5 (lower is better) Translates to: STRDSSTSKHSGGVA*KGQPEPGYASFQIP Trigger: GGGGATCTGGAAGCTGGCGTATCCTGGCTCAGGCTGCCCTTTTCACGCTACTCCCCCGGAGTGCTTGGATGTTGAAGAGTCTCTGGTTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000491414.5 |
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| CDS CCA 90 bp | CTGCCGTTGCTGGGAAATGGAGTAGCCAATGACGATGTTGCCTTCTaGGACGTCCCAGGACACAGTGGCCGAGTTGGCTCTGAGGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LPLLGNGVANDDVAF*DVPGHSGRVGSEVS Trigger: ACTCACCTCAGAGCCAACTCGGCCACTGTGTCCTGGGACGTCCCAGAAGGCAACATCGTCATTGGCTACTCCATTTCCCAGCAACGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000264703.4 ENST00000476197.1 |
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| CDS GCA 90 bp | GCCCACATGAGCAACACCACCACAATGATGACCACTTCCCCAGTCTaGAGTGGCCGCTCTCCATCCAGACCTTCCACTGTGATGTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: AHMSNTTTMMTTSPV*SGRSPSRPSTVMSP Trigger: AGGTGACATCACAGTGGAAGGTCTGGATGGAGAGCGGCCACTGCAGACTGGGGAAGTGGTCATCATTGTGGTGGTGTTGCTCATGTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000264703.4 ENST00000476197.1 ENST00000491414.5 |
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| CDS CCA 90 bp | CATGAGCAACACCACCACAATGATGACCACTTCCCCAGTCTGCAGTaGCCGCTCTCCATCCAGACCTTCCACTGTGATGTCACCTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HEQHHHNDDHFPSLQ*PLSIQTFHCDVTWA Trigger: AGCCCAGGTGACATCACAGTGGAAGGTCTGGATGGAGAGCGGCCACTGCAGACTGGGGAAGTGGTCATCATTGTGGTGGTGTTGCTCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000264703.4 ENST00000476197.1 ENST00000491414.5 |
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| CDS-3UTR CAA 90 bp | ACCGGGGAATGGAAGGAGATATCCCATCTGATATCCACTCCCCAGGTCCAGGGGGTGACTTTTTCTGTCTaGTCCCCACTGGCCTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: TGEWKEISHLISTPQVQGVTFSV*SPLAFP Trigger: AGGGAAGGCCAGTGGGGACAAGACAGAAAAAGTCAC...CCCCTGGACCTGGGGAGTGGATATCAGATGGGATATCTCCTTCCATTCCCCGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR CAA 90 bp | GACTCTCCCCTGGACCGGGGAATGGAAGGAGATATCCCATCTGATATCCACTCCGTACCAGGCCTGAGATaGTGGGAGTGGCATTACCCT | + |
|
Preference number: 5 (lower is better) Translates to: DSPLDRGMEGDIPSDIHSVPGLR*WEWHYP Trigger: AGGGTAATGCCACTCCCACAATCTCAGGCCTGGTAC...GGAGTGGATATCAGATGGGATATCTCCTTCCATTCCCCGGTCCAGGGGAGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS CCA 90 bp | TCATACTTGCTGGGAAATGGAGTAGCCAATGACGATGTTGCCTTCTaGGACGTCCCAGGACACAGTGGCCGAGTTGGCTCTGAGGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SYLLGNGVANDDVAF*DVPGHSGRVGSEVS Trigger: ACTCACCTCAGAGCCAACTCGGCCACTGTGTCCTGGGACGTCCCAGAAGGCAACATCGTCATTGGCTACTCCATTTCCCAGCAAGTATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491414.5 |
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| CDS-3UTR CAA 90 bp | CTAGTGACTCTCCCCTGGACCGGGGAATGGAAGGAGATATCCCATCTGATATCCCTGGGCTTGAACTGTTaGAAGGTAGCCGGTCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LVTLPWTGEWKEISHLISLGLNC*KVAGQN Trigger: GTTCTGACCGGCTACCTTCAAACAGTTCAAGCCCAG...GGATATCAGATGGGATATCTCCTTCCATTCCCCGGTCCAGGGGAGAGTCACTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR CAA 90 bp | AGGCTCCATGGAAGACATTGGAGTAGTGCAGTGCAGCATCTGCCTCTAGGGTCACCCTTTCCCTTCTCCTaGGGATTGTTGTTGGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RLHGRHWSSAVQHLPLGSPFPFS*GLLLES Trigger: TGACTCCAACAACAATCCCAAGGAGAAGGGAAAGGG...TGACCCTAGAGGCAGATGCTGCACTGCACTACTCCAATGTCTTCCATGGAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR CAA 90 bp | CTGCTCACAGTGGAAAGAGGATGGGTACCAGGCCTGAGATTGTGGGAGTGGCATCATCCCTATCCCCAGTaGTTAGTGCATCTCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLTVERGWVPGLRLWEWHHPYPQ*LVHLSS Trigger: AGAAGAGAGATGCACTAACAACTGGGGATAGGGATG...ATGCCACTCCCACAATCTCAGGCCTGGTACCCATCCTCTTTCCACTGTGAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR CAA 90 bp | GGCTCTGCTCACAGTGGAAAGAGGATGGGTACCAGGCCTGAGATTGTGGGAGTGCAAACGTCGATGGTGTaGATAGATGGTGACTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GSAHSGKRMGTRPEIVGVQTSMV*IDGDFF Trigger: GAAAAAGTCACCATCTATCAACACCATCGACGTTTG...CACTCCCACAATCTCAGGCCTGGTACCCATCCTCTTTCCACTGTGAGCAGAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR CAA 90 bp | TGCAGTGCAGCATCTGCCTCTAGGGTCAGACAATTCCTTTTATTTGCTGGGGTAAAATGGGGCCCCCATTaGGGACCTAATGGAGTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: CSAASASRVRQFLLFAGVKWGPH*GPNGVG Trigger: CCCTACTCCATTAGGTCCCAAATGGGGGCCCCATTT...TACCCCAGCAAATAAAAGGAATTGTCTGACCCTAGAGGCAGATGCTGCACTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR CAA 90 bp | AGTGCAGTGCAGCATCTGCCTCTAGGGTCAGACAATTCCTTTTATTTGCTGGGGTTCTCCTTGGGATTGTaGTTGGAGTCATTGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SAVQHLPLGSDNSFYLLGFSLGL*LESLSL Trigger: CAAGGACAATGACTCCAACAACAATCCCAAGGAGAA...CCCCAGCAAATAAAAGGAATTGTCTGACCCTAGAGGCAGATGCTGCACTGCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS-3UTR CAA 90 bp | AACCTTTATTGGAAAAATGTCCAACAAGTGATATCACTAGCAGCTGAAGGGGCTGTCCAAGAACCTTTATaGGAAAAATGTCCAACAAGT | + |
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Preference number: 5 (lower is better) Translates to: NLYWKNVQQVISLAAEGAVQEPL*EKCPTS Trigger: ACTTGTTGGACATTTTTCCAATAAAGGTTCTTGGAC...AGCCCCTTCAGCTGCTAGTGATATCACTTGTTGGACATTTTTCCAATAAAGGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS CCA 72 bp | TGTCCGGGAGCAGGGGGCGTTGCCCGGACGCTGGCCTaGGTCCCCGGTGCGGGAGGCAGTGCGGCGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: CPGAGGVARTLA*VPGAGGSAAAS Trigger: GGAGGCCGCCGCACTGCCTCCCGCACCGGGGACCCAGGCCAGCGTCCGGGCAACGCCCCCTGCTCCCGGACA 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000264703.4 ENST00000491414.5 |
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| CDS CAA 90 bp | CCAGGGCTCGAGCGGGCCACGGAGTCTGTCCGGGAGCAGGGGGCGTaGCCCGGACGCTGGCCTGGGTCCCCGGTGCGGGAGGCAGTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: PGLERATESVREQGA*PGRWPGSPVREAVR Trigger: CCGCACTGCCTCCCGCACCGGGGACCCAGGCCAGCGTCCGGGCAACGCCCCCTGCTCCCGGACAGACTCCGTGGCCCGCTCGAGCCCTGG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000264703.4 ENST00000491414.5 |
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| CDS CCA 72 bp | GAGTCTGTCCGGGAGCAGGGGGCGTTGCCCGGACGCTaGCCTGGGTCCCCGGTGCGGGAGGCAGTGCGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: ESVREQGALPGR*PGSPVREAVRR Trigger: CCGCCGCACTGCCTCCCGCACCGGGGACCCAGGCCAGCGTCCGGGCAACGCCCCCTGCTCCCGGACAGACTC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000264703.4 ENST00000491414.5 |
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| CDS CAA 72 bp | GAGCGGGCCACGGAGTCTGTCCGGGAGCAGGGGGCGTaGCCCGGACGCTGGCCTGGGTCCCCGGTGCGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ERATESVREQGA*PGRWPGSPVRE Trigger: CTCCCGCACCGGGGACCCAGGCCAGCGTCCGGGCAACGCCCCCTGCTCCCGGACAGACTCCGTGGCCCGCTC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000264703.4 ENST00000491414.5 |
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| CDS GCA 72 bp | GCCCGGGTGGTGGTGTTCACCTCCCGAATCACACGCTaGCCGGGGCCATTCTGCCGCTGCAGGGAGATGAGG | + |
|
Preference number: 6 (lower is better) Translates to: ARVVVFTSRITR*PGPFCRCREMR Trigger: CCTCATCTCCCTGCAGCGGCAGAATGGCCCCGGGCAGCGTGTGATTCGGGAGGTGAACACCACCACCCGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491414.5 |
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| CDS TCA 72 bp | GAGGCCGGTCTGCTCGCACGAAGCCCAGGTCACAGCTaGCCAGCAGGAGGACCGTGGGGCTTAGATATGGGG | + |
|
Preference number: 6 (lower is better) Translates to: EAGLLARSPGHS*PAGGPWGLDMG Trigger: CCCCATATCTAAGCCCCACGGTCCTCCTGCTGGTCAGCTGTGACCTGGGCTTCGTGCGAGCAGACCGGCCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000264703.4 ENST00000476197.1 ENST00000491414.5 |
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| CDS GCA 72 bp | GCCCGGGTGGTGGTGTTCACCTCCCGAATCACACGCTaGCCGGGGCCATTCTGCCGTTGCTGGGAAATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ARVVVFTSRITR*PGPFCRCWEME Trigger: CTCCATTTCCCAGCAACGGCAGAATGGCCCCGGGCAGCGTGTGATTCGGGAGGTGAACACCACCACCCGGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264703.4 ENST00000476197.1 |
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| CDS TCA 72 bp | GCCCTGGGGGACTCTCTCCCCGAAGGCCGATGCTCCTaGCCTGCACTGTGTAGTCACTGTCTTCAGCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ALGDSLPEGRCS*PALCSHCLQPG Trigger: GCCTGGCTGAAGACAGTGACTACACAGTGCAGGTCAGGAGCATCGGCCTTCGGGGAGAGAGTCCCCCAGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000264703.4 ENST00000476197.1 ENST00000491414.5 |
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| CDS TCA 72 bp | ACGTCCCAGGACACAGTGGCCGAGTTGGCTCTGAGGTaGGTGACCGTCACATTCACAGGAGAGGGAGGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: TSQDTVAELALR*VTVTFTGEGGR Trigger: CCGGCCTCCCTCTCCTGTGAATGTGACGGTCACTCACCTCAGAGCCAACTCGGCCACTGTGTCCTGGGACGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000264703.4 ENST00000476197.1 ENST00000491414.5 |
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| CDS TCA 72 bp | GGCTTGAACTGTTTGAAGGTAGCCGGTCAGAACCCTTaGGAGTTCGGAAGTGCACCCGGGGCCCTGGGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: GLNCLKVAGQNP*EFGSAPGALGD Trigger: GTCCCCCAGGGCCCCGGGTGCACTTCCGAACTCTCAAGGGTTCTGACCGGCTACCTTCAAACAGTTCAAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000264703.4 ENST00000476197.1 ENST00000491414.5 |
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| CDS CAA 72 bp | GGGCTTGAACTGTTTGAAGGTAGCCGGTCAGAACCCTaGAGAGTTCGGAAGTGCACCCGGGGCCCTGGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GLELFEGSRSEP*RVRKCTRGPGG Trigger: TCCCCCAGGGCCCCGGGTGCACTTCCGAACTCTCAAGGGTTCTGACCGGCTACCTTCAAACAGTTCAAGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000264703.4 ENST00000476197.1 ENST00000491414.5 |
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| CDS CAA 90 bp | ATGTCACCTGGGCTTGAACTGTTTGAAGGTAGCCGGTCAGAACCCTaGAGAGTTCGGAAGTGCACCCGGGGCCCTGGGGGACTCTCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: MSPGLELFEGSRSEP*RVRKCTRGPGGLSP Trigger: GGGAGAGAGTCCCCCAGGGCCCCGGGTGCACTTCCGAACTCTCAAGGGTTCTGACCGGCTACCTTCAAACAGTTCAAGCCCAGGTGACAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000264703.4 ENST00000476197.1 ENST00000491414.5 |
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| CDS TCA 72 bp | GACTCTTCAACATCCAAGCACTCCGGGGGAGTAGCGTaGAAAGGGCAGCCTGAGCCAGGATACGCCAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: DSSTSKHSGGVA*KGQPEPGYASF Trigger: GAAGCTGGCGTATCCTGGCTCAGGCTGCCCTTTTCACGCTACTCCCCCGGAGTGCTTGGATGTTGAAGAGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000491414.5 |
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| CDS TCA 72 bp | GGCCATTCTGCCGTTGCTGGGAAATGGAGTAGCCAATaGCGATGTTGCCTTCTGGGACGTCCCAGGACACAG | + |
|
Preference number: 6 (lower is better) Translates to: GHSAVAGKWSSQ*RCCLLGRPRTQ Trigger: CTGTGTCCTGGGACGTCCCAGAAGGCAACATCGTCATTGGCTACTCCATTTCCCAGCAACGGCAGAATGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000264703.4 ENST00000476197.1 |
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| CDS GCA 72 bp | AGCAACACCACCACAATGATGACCACTTCCCCAGTCTaGAGTGGCCGCTCTCCATCCAGACCTTCCACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SNTTTMMTTSPV*SGRSPSRPSTV Trigger: CACAGTGGAAGGTCTGGATGGAGAGCGGCCACTGCAGACTGGGGAAGTGGTCATCATTGTGGTGGTGTTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000264703.4 ENST00000476197.1 ENST00000491414.5 |
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| CDS CCA 72 bp | CTGGGAAATGGAGTAGCCAATGACGATGTTGCCTTCTaGGACGTCCCAGGACACAGTGGCCGAGTTGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LGNGVANDDVAF*DVPGHSGRVGS Trigger: AGAGCCAACTCGGCCACTGTGTCCTGGGACGTCCCAGAAGGCAACATCGTCATTGGCTACTCCATTTCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000264703.4 ENST00000476197.1 ENST00000491414.5 |
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| CDS CCA 72 bp | CACCACCACAATGATGACCACTTCCCCAGTCTGCAGTaGCCGCTCTCCATCCAGACCTTCCACTGTGATGTC | + |
|
Preference number: 6 (lower is better) Translates to: HHHNDDHFPSLQ*PLSIQTFHCDV Trigger: GACATCACAGTGGAAGGTCTGGATGGAGAGCGGCCACTGCAGACTGGGGAAGTGGTCATCATTGTGGTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000264703.4 ENST00000476197.1 ENST00000491414.5 |
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| CDS CAA 72 bp | GGACACAGGTTGGGGGAGCAGAAGGGTGATTCATACTaGCTGGGAAATGGAGTAGCCAATGACGATGTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: GHRLGEQKGDSY*LGNGVANDDVA Trigger: GGCAACATCGTCATTGGCTACTCCATTTCCCAGCAAGTATGAATCACCCTTCTGCTCCCCCAACCTGTGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000491414.5 |
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| CDS CAA 90 bp | GAAATCCAAGGACACAGGTTGGGGGAGCAGAAGGGTGATTCATACTaGCTGGGAAATGGAGTAGCCAATGACGATGTTGCCTTCTGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: EIQGHRLGEQKGDSY*LGNGVANDDVAFWD Trigger: GTCCCAGAAGGCAACATCGTCATTGGCTACTCCATTTCCCAGCAAGTATGAATCACCCTTCTGCTCCCCCAACCTGTGTCCTTGGATTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000491414.5 |
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| CDS CAA 72 bp | TTCTGGGTGTGTTTCTTCACTCAAACGTCGATGGTGTaGATAGATGGTGACTTTTTCTGTCTTGTCCCCACT | + |
|
Preference number: 6 (lower is better) Translates to: FWVCFFTQTSMV*IDGDFFCLVPT Trigger: AGTGGGGACAAGACAGAAAAAGTCACCATCTATCAACACCATCGACGTTTGAGTGAAGAAACACACCCAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264703.4 |
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| CDS CAA 72 bp | TTCTGGGTGTGTTTCTTCACTCAAACGTCGATGGTGTaGATAGATGGTGACTTTTTCAGCCCACATGAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: FWVCFFTQTSMV*IDGDFFSPHEQ Trigger: TTGCTCATGTGGGCTGAAAAAGTCACCATCTATCAACACCATCGACGTTTGAGTGAAGAAACACACCCAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000491414.5 |
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