RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FNDC3B (Homo sapiens)

Ensembl gene IDs: ENSG00000075420

Ensembl transcript IDs: ENST00000336824.8, ENST00000415807.7, ENST00000416957.5, ENST00000421757.5, ENST00000423424.5, ENST00000443501.1, ENST00000469491.5, ENST00000476794.1, ENST00000478016.1, ENST00000483344.1, ENST00000494000.1

Found 586 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGCTCACAGTCCTCCAAGGCCTTGGTCAGCAAGAGCTGAGCTGCTaGTGTCTCTGCAGAAGGCCACCTGCCTGGCCTCCAAAAACACGT +
Preference number: 1 (lower is better)
Translates to: WLTVLQGLGQQELSC*CLCRRPPAWPPKTR
Trigger: ACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCTGCAGAGACAGCAGCAGCTCAGCTCTTGCTGACCAAGGCCTTGGAGGACTGTGAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR GCA 90 bp TTGTGGCTCACAGTCCTCCAAGGCCTTGGTCAGCAAGAGCTGAGCTaGTGCTGTCTCTGCAGAAGGCCACCTGCCTGGCCTCCAAAAACA +
Preference number: 1 (lower is better)
Translates to: LWLTVLQGLGQQELS*CCLCRRPPAWPPKT
Trigger: TGTTTTTGGAGGCCAGGCAGGTGGCCTTCTGCAGAGACAGCAGCAGCTCAGCTCTTGCTGACCAAGGCCTTGGAGGACTGTGAGCCACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR CCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATaGACATATGTGATTGTGGCTCACAGTCCTCCAAGGCCTTGGTCA +
Preference number: 1 (lower is better)
Translates to: VGPWRKSGYLASFET*TYVIVAHSPPRPWS
Trigger: TGACCAAGGCCTTGGAGGACTGTGAGCCACAATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR TCA 90 bp CCTTTTAGTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTaGAACATGGACATATGTGATTGTGGCTCACAGTCCTCCAAGGCC +
Preference number: 1 (lower is better)
Translates to: PFSWPMEEIWIFSFF*NMDICDCGSQSSKA
Trigger: GGCCTTGGAGGACTGTGAGCCACAATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAACTAAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR CCA 90 bp AAACTGGCAGCCTGTATAGTCCACAATCACCTTTTAGTTGGCCCATaGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATAT +
Preference number: 1 (lower is better)
Translates to: KLAACIVHNHLLVGP*RKSGYLASFETWTY
Trigger: ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAACTAAAAGGTGATTGTGGACTATACAGGCTGCCAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR GCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGCTGGGAGCTGGAGGTTaGAGTGAGCTGAGATCGCGC +
Preference number: 2 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWLGAGG*SELRSR
Trigger: GCGCGATCTCAGCTCACTGCAACCTCCAGCTCCCAG...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR CCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGGCAGTGAGCCGAGATTaGGTCACTGCACTCCAGCCT +
Preference number: 2 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWAVSRD*VTALQP
Trigger: AGGCTGGAGTGCAGTGACCCAATCTCGGCTCACTGC...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR TCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGACTCTTAAATGTCCCTaGGGTACTCGAACATTATGG +
Preference number: 2 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWTLKCP*GTRTLW
Trigger: CCATAATGTTCGAGTACCTCAGGGACATTTAAGAGT...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR TCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGTGCATTCTGGTTACTTaGTTTCTTATACAGGCAGCT +
Preference number: 2 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWCILVT*FLIQAA
Trigger: AGCTGCCTGTATAAGAAATCAAGTAACCAGAATGCA...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR TCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGTTTCAACAATTTCTTTaGGGACAAAGGGCAGTTTGC +
Preference number: 2 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWFQQFL*GQRAVC
Trigger: GCAAACTGCCCTTTGTCCTCAAAGAAATTGTTGAAA...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR CCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGTCTGTTGCACCCTTTTaGAATATATTTGCACCTCCA +
Preference number: 2 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWSVAPF*NIFAPP
Trigger: TGGAGGTGCAAATATATTCCAAAAGGGTGCAACAGA...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR TCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGATTCAATCACTTCATTaGTACCTCAAAGAACAGCCT +
Preference number: 2 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWIQSLH*YLKEQP
Trigger: AGGCTGTTCTTTGAGGTATCAATGAAGTGATTGAAT...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR TCA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATAGGTGGAGCTTGCAGTaGGCCGAGATTGGGTCACTG +
Preference number: 2 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNRWSLQ*AEIGSL
Trigger: CAGTGACCCAATCTCGGCTCACTGCAAGCTCCACCT...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR GCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATCTGGGAGCTGGAGGTTaGAGTGAGCTGAGATCGCGC +
Preference number: 2 (lower is better)
Translates to: VGPWRKSGYLASFETWTYLGAGG*SELRSR
Trigger: GCGCGATCTCAGCTCACTGCAACCTCCAGCTCCCAG...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR TCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGCACAGAGAGGTAAAGTaGCGTGTTCAGGTCACGCAG +
Preference number: 2 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLHREVK*RVQVTQ
Trigger: CTGCGTGACCTGAACACGTCACTTTACCTCTCTGTG...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR TCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATAGGTGGAGCTTGCAGTaGGCCGAGATTGGGTCACTG +
Preference number: 2 (lower is better)
Translates to: VGPWRKSGYLASFETWTYRWSLQ*AEIGSL
Trigger: CAGTGACCCAATCTCGGCTCACTGCAAGCTCCACCT...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR CCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGCAGTGAGCCGAGATTaGGTCACTGCACTCCAGCCT +
Preference number: 2 (lower is better)
Translates to: VGPWRKSGYLASFETWTYAVSRD*VTALQP
Trigger: AGGCTGGAGTGCAGTGACCCAATCTCGGCTCACTGC...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR GCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATCAGCAAGAGCTGAGCTaGTGCTGTCTCTGCAGAAGG +
Preference number: 2 (lower is better)
Translates to: VGPWRKSGYLASFETWTYQQELS*CCLCRR
Trigger: CCTTCTGCAGAGACAGCAGCAGCTCAGCTCTTGCTG...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR CCA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCGTAAATCATGGACAATaGGCAGAGGCACTAAACTGT +
Preference number: 2 (lower is better)
Translates to: SCARDEFDIQRRVRASEGVNHGQ*AEALNC
Trigger: ACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTAC...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR CCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATAGTCCTCCAAGGCCTTaGTCAGCAAGAGCTGAGCTG +
Preference number: 2 (lower is better)
Translates to: VGPWRKSGYLASFETWTYSPPRP*SARAEL
Trigger: CAGCTCAGCTCTTGCTGACCAAGGCCTTGGAGGACT...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR TCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATCACAGAGAGGTAAAGTaGCGTGTTCAGGTCACGCAG +
Preference number: 2 (lower is better)
Translates to: VGPWRKSGYLASFETWTYHREVK*RVQVTQ
Trigger: CTGCGTGACCTGAACACGTCACTTTACCTCTCTGTG...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR TCA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATGCAGTTTGCTTCACATaGCTGGAATTTCTTGTGCCA +
Preference number: 2 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNAVCFT*LEFLVP
Trigger: TGGCACAAGAAATTCCAGTCATGTGAAGCAAACTGC...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR GCA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCTTTAGAAAATGCAGATaGTGTGGTCATAGTGGGTCA +
Preference number: 2 (lower is better)
Translates to: SCARDEFDIQRRVRASEGFRKCR*CGHSGS
Trigger: TGACCCACTATGACCACAGCATCTGCATTTTCTAAA...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR CCA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCCACACTTCAGCTTCCTaGTGGTTAAATGATAGTATG +
Preference number: 2 (lower is better)
Translates to: SCARDEFDIQRRVRASEGHTSAS*WLNDSM
Trigger: CATACTATCATTTAACCACCAGGAAGCTGAAGTGTG...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR CAA 90 bp AAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTaGCACCTCCAACTCTTAAATGTCCCTGAGGTACTCGAACATTAT +
Preference number: 2 (lower is better)
Translates to: KQGDTLCLLHPFGIY*HLQLLNVPEVLEHY
Trigger: ATAATGTTCGAGTACCTCAGGGACATTTAAGAGTTGGAGGTGCAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR TCA 90 bp AAGGTAATAAGCAGGAATAAAGCTTCCAAAAACCTGGAAGGACTCTTTCAGGTGATCCACTTCAGACATTaGAAAGCCACACCGCGAAGT +
Preference number: 2 (lower is better)
Translates to: KVISRNKASKNLEGLFQVIHFRH*KATPRS
Trigger: ACTTCGCGGTGTGGCTTTTCAATGTCTGAAGTGGAT...CACCTGAAAGAGTCCTTCCAGGTTTTTGGAAGCTTTATTCCTGCTTATTACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421757.5
3UTR-3UTR GCA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTCAAGAGCTGAGCTGCTaGTGTCTCTGCAGAAGGCCA +
Preference number: 2 (lower is better)
Translates to: PWRKSGYLASFETWTYVIQELSC*CLCRRP
Trigger: TGGCCTTCTGCAGAGACAGCAGCAGCTCAGCTCTTG...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR CCA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATGTAAATCATGGACAATaGGCAGAGGCACTAAACTGT +
Preference number: 2 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNVNHGQ*AEALNC
Trigger: ACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTAC...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR CCA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATTTTGCTTCACATGACTaGAATTTCTTGTGCCAGGGA +
Preference number: 2 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNFASHD*NFLCQG
Trigger: TCCCTGGCACAAGAAATTCCAGTCATGTGAAGCAAA...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR GCA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCATACACTGTGTCTGTTaGACCCTTTTGGAATATATT +
Preference number: 2 (lower is better)
Translates to: SCARDEFDIQRRVRASEGIHCVC*TLLEYI
Trigger: AATATATTCCAAAAGGGTGCAACAGACACAGTGTAT...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR TCA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATGCAGTCTTATCTGAGTaGACATATCTTCTGTATGTT +
Preference number: 2 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNAVLSE*TYLLYV
Trigger: AACATACAGAAGATATGTTCACTCAGATAAGACTGC...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR TCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGCAGTTTGCTTCACATaGCTGGAATTTCTTGTGCCA +
Preference number: 2 (lower is better)
Translates to: VGPWRKSGYLASFETWTYAVCFT*LEFLVP
Trigger: TGGCACAAGAAATTCCAGTCATGTGAAGCAAACTGC...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR GCA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATCTAACTATTGCACAATaGCCTCTTAAAGTTACTGCT +
Preference number: 2 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNLTIAQ*PLKVTA
Trigger: AGCAGTAACTTTAAGAGGGCATTGTGCAATAGTTAG...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR TCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGGCAGTCTTATCTGAGTaGACATATCTTCTGTATGTT +
Preference number: 2 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLAVLSE*TYLLYV
Trigger: AACATACAGAAGATATGTTCACTCAGATAAGACTGC...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR CCA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATACTTCAGCTTCCTGGTaGTTAAATGATAGTATGAAA +
Preference number: 2 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNTSASW*LNDSMK
Trigger: TTTCATACTATCATTTAACCACCAGGAAGCTGAAGT...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR TCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATTGCATTCTGGTTACTTaGTTTCTTATACAGGCAGCT +
Preference number: 2 (lower is better)
Translates to: VGPWRKSGYLASFETWTYCILVT*FLIQAA
Trigger: AGCTGCCTGTATAAGAAATCAAGTAACCAGAATGCA...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR GCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATTTTAGAAAATGCAGATaGTGTGGTCATAGTGGGTCA +
Preference number: 2 (lower is better)
Translates to: VGPWRKSGYLASFETWTYFRKCR*CGHSGS
Trigger: TGACCCACTATGACCACAGCATCTGCATTTTCTAAA...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR CCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATTCTGTTGCACCCTTTTaGAATATATTTGCACCTCCA +
Preference number: 2 (lower is better)
Translates to: VGPWRKSGYLASFETWTYSVAPF*NIFAPP
Trigger: TGGAGGTGCAAATATATTCCAAAAGGGTGCAACAGA...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR GCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATATATCTTCTGTATGTTaGTGTTGCTGTGTGGTAATA +
Preference number: 2 (lower is better)
Translates to: VGPWRKSGYLASFETWTYISSVC*CCCVVI
Trigger: TATTACCACACAGCAACAGCAACATACAGAAGATAT...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR CCA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTCACACTTCAGCTTCCTaGTGGTTAAATGATAGTATG +
Preference number: 2 (lower is better)
Translates to: PWRKSGYLASFETWTYVIHTSAS*WLNDSM
Trigger: CATACTATCATTTAACCACCAGGAAGCTGAAGTGTG...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR TCA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTTCAAAAATAATGAGCTaGCACATAAGAAGACTGCTC +
Preference number: 2 (lower is better)
Translates to: PWRKSGYLASFETWTYVISKIMS*HIRRLL
Trigger: GAGCAGTCTTCTTATGTGTCAGCTCATTATTTTTGA...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR CAA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGGTGCCAGGGATGAGTTaGACATACAGAGAAGAGTCA +
Preference number: 3 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWVPGMS*TYREES
Trigger: TGACTCTTCTCTGTATGTCAAACTCATCCCTGGCAC...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR CCA 72 bp ACATATGTGATTGTGGCTCACAGTCCTCCAAGGCCTTaGTCAGCAAGAGCTGAGCTGCTGCTGTCTCTGCAG +
Preference number: 3 (lower is better)
Translates to: TYVIVAHSPPRP*SARAELLLSLQ
Trigger: CTGCAGAGACAGCAGCAGCTCAGCTCTTGCTGACCAAGGCCTTGGAGGACTGTGAGCCACAATCACATATGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR CAA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGCATATCTTCTGTATGTaGCTGTTGCTGTGTGGTAAT +
Preference number: 3 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWHIFCM*LLLCGN
Trigger: ATTACCACACAGCAACAGCAACATACAGAAGATATG...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR CAA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGATAATACTACAGATGTaGCCAAGGAACAAGACTGAC +
Preference number: 3 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWIILQM*PRNKTD
Trigger: GTCAGTCTTGTTCCTTGGCAACATCTGTAGTATTAT...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR CAA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGCTAGAGTTGAAAAGCTaGGAATGTATGTCCAACAGT +
Preference number: 3 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWLELKS*ECMSNS
Trigger: ACTGTTGGACATACATTCCAAGCTTTTCAACTCTAG...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR CAA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGAATTCAATCACTTCATaGATACCTCAAAGAACAGCC +
Preference number: 3 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWNSITS*IPQRTA
Trigger: GGCTGTTCTTTGAGGTATCAATGAAGTGATTGAATT...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR CAA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGTGTTTCCCCATGACTTaGGTATGGGAATATTATAAG +
Preference number: 3 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWCFPMT*VWEYYK
Trigger: CTTATAATATTCCCATACCAAAGTCATGGGGAAACA...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR CAA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATAGGCAGGGGAATCACTaGAACCTGGGAGCTGGAGGT +
Preference number: 3 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNRQGNH*NLGAGG
Trigger: ACCTCCAGCTCCCAGGTTCAAGTGATTCCCCTGCCT...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR TCA 72 bp GAACTGACTGTGGGCCACTTAATCCACTTCAGACATTaGAAAGCCACACCGCGAAGTGCTCGTAATGAAGAA +
Preference number: 3 (lower is better)
Translates to: ELTVGHLIHFRH*KATPRSARNEE
Trigger: TTCTTCATTACGAGCACTTCGCGGTGTGGCTTTTCAATGTCTGAAGTGGATTAAGTGGCCCACAGTCAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421757.5
3UTR-3UTR CAA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCGTGCATTCTGGTTACTaGATTTCTTATACAGGCAGC +
Preference number: 3 (lower is better)
Translates to: SCARDEFDIQRRVRASEGVHSGY*ISYTGS
Trigger: GCTGCCTGTATAAGAAATCAAGTAACCAGAATGCAC...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR TCA 72 bp GGGGAAAAGAAGTCAACCCAGTGTTTCCACTTTCCATaGAGGACTTCTCAAGGGCAAGGTAATAAGCAGGAA +
Preference number: 3 (lower is better)
Translates to: GEKKSTQCFHFP*RTSQGQGNKQE
Trigger: TTCCTGCTTATTACCTTGCCCTTGAGAAGTCCTTCATGGAAAGTGGAAACACTGGGTTGACTTCTTTTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421757.5
3UTR CCA 72 bp GAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTaGAATATATTTGCACCTCCAACTCTTAAATGTCCC +
Preference number: 3 (lower is better)
Translates to: EAGGYTVSVAPF*NIFAPPTLKCP
Trigger: GGGACATTTAAGAGTTGGAGGTGCAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR CAA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATGTCTGTTGCACCCTTTaGGAATATATTTGCACCTCC +
Preference number: 3 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNVCCTL*EYICTS
Trigger: GGAGGTGCAAATATATTCCAAAAGGGTGCAACAGAC...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR CAA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCGATACACTGTGTCTGTaGCACCCTTTTGGAATATAT +
Preference number: 3 (lower is better)
Translates to: SCARDEFDIQRRVRASEGDTLCL*HPFGIY
Trigger: ATATATTCCAAAAGGGTGCAACAGACACAGTGTATC...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR CAA 90 bp ACTTTCCATGAAGGACTTCTCAAGGGCAAGGTAATAAGCAGGAATAAAGCTTCCAATCCACTTCAGACATaGAAAAGCCACACCGCGAAG +
Preference number: 3 (lower is better)
Translates to: TFHEGLLKGKVISRNKASNPLQT*KSHTAK
Trigger: CTTCGCGGTGTGGCTTTTCAATGTCTGAAGTGGATT...GGAAGCTTTATTCCTGCTTATTACCTTGCCCTTGAGAAGTCCTTCATGGAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421757.5
3UTR-3UTR CAA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCAACTGTCACCAGTTCTaGTCATATAATTCTGGTCAA +
Preference number: 3 (lower is better)
Translates to: SCARDEFDIQRRVRASEGNCHQF*SYNSGQ
Trigger: TTGACCAGAATTATATGACAAGAACTGGTGACAGTT...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR CAA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGCGTAAGAGTAACACTTaGCACTCCAATAGCACCTGT +
Preference number: 3 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLRKSNT*HSNSTC
Trigger: ACAGGTGCTATTGGAGTGCAAAGTGTTACTCTTACG...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR CCA 72 bp ACTGGCAGCCTGTATAGTCCACAATCACCTTTTAGTTaGCCCATGGAGGAAATCTGGATATTTAGCTTCTTT +
Preference number: 3 (lower is better)
Translates to: TGSLYSPQSPFS*PMEEIWIFSFF
Trigger: AAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAACTAAAAGGTGATTGTGGACTATACAGGCTGCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR CAA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGTTCTGTATGTTGCTGTaGCTGTGTGGTAATACTCTG +
Preference number: 3 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLFCMLL*LCGNTL
Trigger: CAGAGTATTACCACACAGCAACAGCAACATACAGAA...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR CAA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATCATATCTTCTGTATGTaGCTGTTGCTGTGTGGTAAT +
Preference number: 3 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNHIFCM*LLLCGN
Trigger: ATTACCACACAGCAACAGCAACATACAGAAGATATG...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR CAA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTCAGATCGAGACCATCTaGGCCAACATGGTGAAACCC +
Preference number: 3 (lower is better)
Translates to: PWRKSGYLASFETWTYVIQIETI*ANMVKP
Trigger: GGGTTTCACCATGTTGGCCAAGATGGTCTCGATCTG...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR TCA 72 bp GTGACAAAATGGTTGTTTAGGGCAGTCTTATCTGAGTaGACATATCTTCTGTATGTTGCTGTTGCTGTGTGG +
Preference number: 3 (lower is better)
Translates to: VTKWLFRAVLSE*TYLLYVAVAVW
Trigger: CCACACAGCAACAGCAACATACAGAAGATATGTTCACTCAGATAAGACTGCCCTAAACAACCATTTTGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR CAA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATCGTAAGAGTAACACTTaGCACTCCAATAGCACCTGT +
Preference number: 3 (lower is better)
Translates to: VGPWRKSGYLASFETWTYRKSNT*HSNSTC
Trigger: ACAGGTGCTATTGGAGTGCAAAGTGTTACTCTTACG...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR CAA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTCTGTTGCACCCTTTaGGAATATATTTGCACCTCC +
Preference number: 3 (lower is better)
Translates to: VGPWRKSGYLASFETWTYVCCTL*EYICTS
Trigger: GGAGGTGCAAATATATTCCAAAAGGGTGCAACAGAC...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR CAA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATAGGACAAAGGGCAGTTaGCTTCACATGACTGGAATT +
Preference number: 3 (lower is better)
Translates to: VGPWRKSGYLASFETWTYRTKGS*LHMTGI
Trigger: AATTCCAGTCATGTGAAGCAAACTGCCCTTTGTCCT...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR CAA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATTTCTGTATGTTGCTGTaGCTGTGTGGTAATACTCTG +
Preference number: 3 (lower is better)
Translates to: VGPWRKSGYLASFETWTYFCMLL*LCGNTL
Trigger: CAGAGTATTACCACACAGCAACAGCAACATACAGAA...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR CAA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGAATTCAATCACTTCATaGATACCTCAAAGAACAGCC +
Preference number: 3 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLNSITS*IPQRTA
Trigger: GGCTGTTCTTTGAGGTATCAATGAAGTGATTGAATT...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR CCA 72 bp TGTCAGCTTTGTACTTCACACACTTCAGCTTCCTGGTaGTTAAATGATAGTATGAAAATCTCAAGAAGATCA +
Preference number: 3 (lower is better)
Translates to: CQLCTSHTSASW*LNDSMKISRRS
Trigger: TGATCTTCTTGAGATTTTCATACTATCATTTAACCACCAGGAAGCTGAAGTGTGTGAAGTACAAAGCTGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR-3UTR CAA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTATAATACTACAGATGTaGCCAAGGAACAAGACTGAC +
Preference number: 3 (lower is better)
Translates to: PWRKSGYLASFETWTYVIIILQM*PRNKTD
Trigger: GTCAGTCTTGTTCCTTGGCAACATCTGTAGTATTAT...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGTCCCAGCCGGCAGCCTaGAGGATCCCTGCCGCCCCC +
Preference number: 4 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWSQPAA*RIPAAP
Trigger: GGGGGCGGCAGGGATCCTCCAGGCTGCCGGCTGGGA...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415807.7
CDS-3UTR TCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGAGCTGGAGGTTGCAGTaGGCTGAGATCGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWSWRLQ*AEIAPL
Trigger: CAGTGGCGCGATCTCAGCTCACTGCAACCTCCAGCT...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGGGTTGGAGACATGGCTaGGGGGTAGCTTGGGGGATA +
Preference number: 4 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWGWRHG*GVAWGI
Trigger: TATCCCCCAAGCTACCCCTCAGCCATGTCTCCAACC...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGTGTGTCCGCCGGTACTaGTGCAGCATGCTCGGAGTT +
Preference number: 4 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWCVRRY*CSMLGV
Trigger: AACTCCGAGCATGCTGCATCAGTACCGGCGGACACA...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGACCCAGTGTGCCAGGTaGACAGAGGGAGATCTGGAC +
Preference number: 4 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWTQCAR*TEGDLD
Trigger: GTCCAGATCTCCCTCTGTTCACCTGGCACACTGGGT...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGTTCCAGGAAGCAGGTTaGCGACGGTGCACTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWFQEAG*RRCTPA
Trigger: AGCTGGAGTGCACCGTCGGCAACCTGCTTCCTGGAA...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGCTGCAGAAGGCCACCTaGCTGGCCTCCAAAAACACG +
Preference number: 4 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWLQKAT*LASKNT
Trigger: CGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCTGCAG...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGGATGGGTTGGAGACATaGCTGAGGGGTAGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWDGLET*LRGSLG
Trigger: CCCCAAGCTACCCCTCAGCCATGTCTCCAACCCATC...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGACTACCAGGAGGGTTTaGTGGGGGATTCCGCCATGT +
Preference number: 4 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWTTRRV*WGIPPC
Trigger: ACATGGCGGAATCCCCCATCAAACCCTCCTGGTAGT...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415807.7
CDS-3UTR CCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGAGTCCTCCAAGGCCTTaGTCAGCAAGAGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWSPPRP*SARAEL
Trigger: CAGCTCAGCTCTTGCTGACCAAGGCCTTGGAGGACT...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGCTCGGTGGTCGACATTaGCCTGGTGCAATGCTTAGT +
Preference number: 4 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWLGGRH*PGAMLS
Trigger: ACTAAGCATTGCACCAGGTCAATGTCGACCACCGAG...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGCATTCGACTTTGGGCTaGTTCTTGCTCGTCGCTCTG +
Preference number: 4 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWHSTLG*FLLVAL
Trigger: CAGAGCGACGAGCAAGAAGCAGCCCAAAGTCGAATG...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGCTCTCCGTTCAGCAATaGTGGCAGTTCCAGAGGGAT +
Preference number: 4 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWLSVQQ*WQFQRD
Trigger: ATCCCTCTGGAACTGCCACCATTGCTGAACGGAGAG...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGAGACTTTCAGAACACTaGCTGTGTCCGCCGGTACTG +
Preference number: 4 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWRLSEH*LCPPVL
Trigger: CAGTACCGGCGGACACAGCCAGTGTTCTGAAAGTCT...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCCGGGACCACTACCGCTaGCGCCTCCGCCACTTCCAC +
Preference number: 4 (lower is better)
Translates to: SCARDEFDIQRRVRASEGRDHYR*RLRHFH
Trigger: GTGGAAGTGGCGGAGGCGGCAGCGGTAGTGGTCCCG...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGTCTGGCTTACTCCACTaGAACGTGACCCATGTGATG +
Preference number: 4 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWSGLLH*NVTHVM
Trigger: CATCACATGGGTCACGTTGCAGTGGAGTAAGCCAGA...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGTCCGTTCAGCAATGGTaGCAGTTCCAGAGGGATTTG +
Preference number: 4 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWSVQQW*QFQRDL
Trigger: CAAATCCCTCTGGAACTGCCACCATTGCTGAACGGA...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGAATGGATCCATTGGGTaGCATCATGGGAACTTCAGC +
Preference number: 4 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWNGSIG*HHGNFS
Trigger: GCTGAAGTTCCCATGATGTCACCCAATGGATCCATT...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGTTCCAACCTGTACTCTaGGATGTCAGCACCAGAACT +
Preference number: 4 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWFQPVL*DVSTRT
Trigger: AGTTCTGGTGCTGACATCTCAGAGTACAGGTTGGAA...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGAAAGCTTTGTCAACTTaGAGTGCTTCTGGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWKALST*SASGSR
Trigger: TCGGGAGCCAGAAGCACTGCAAGTTGACAAAGCTTT...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATCTTCCGGAGCTCCGCTaGCCCACACACCGGGTCGCC +
Preference number: 4 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNLPELR*PTHRVA
Trigger: GGCGACCCGGTGTGTGGGCCAGCGGAGCTCCGGAAG...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336824.8
CDS-3UTR TCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGATCTTCAATCACCTGTaGGATATAACCTGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWIFNHL*DITWRH
Trigger: GTGCCTCCAGGTTATATCTCACAGGTGATTGAAGAT...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGGTACTTGAGGATTTCTaGACCACCATTGTCCTTAGG +
Preference number: 4 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWVLEDF*TTIVLR
Trigger: CCTAAGGACAATGGTGGTTCAGAAATCCTCAAGTAC...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGCTGCAGGAAAGGACATaGACACTCTATAGAGTTCGT +
Preference number: 4 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWLQERT*TLYRVR
Trigger: ACGAACTCTATAGAGTGTTCATGTCCTTTCCTGCAG...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGATTGGTGCCTTCCACTaGAGGGTTAGTGAACTTTTG +
Preference number: 4 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWIGAFH*RVSELL
Trigger: CAAAAGTTCACTAACCCTGCAGTGGAAGGCACCAAT...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGCCGGTAGGTGGTTTCTaGAAGGAGATCTTTCATAAC +
Preference number: 4 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWPVGGF*KEIFHN
Trigger: GTTATGAAAGATCTCCTTCCAGAAACCACCTACCGG...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AAGCTTCCAAAAACCTGGAAGGACTCTTTCAGGTGGACTAATAAGCATCATCATTCCCAGCCGGCAGCCTaGAGGATCCCTGCCGCCCCC +
Preference number: 4 (lower is better)
Translates to: KLPKTWKDSFRWTNKHHHSQPAA*RIPAAP
Trigger: GGGGGCGGCAGGGATCCTCCAGGCTGCCGGCTGGGA...ATGATGATGCTTATTAGTCCACCTGAAAGAGTCCTTCCAGGTTTTTGGAAGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421757.5
CDS-3UTR TCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGCAGGAGACTGGGGTGTaGCCACCACCCGGCGGACTC +
Preference number: 4 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLQETGV*PPPGGL
Trigger: GAGTCCGCCGGGTGGTGGTCACACCCCAGTCTCCTG...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCCAGGAGACTGGGGTGTaGCCACCACCCGGCGGACTC +
Preference number: 4 (lower is better)
Translates to: TISVNHGQWAEALNCHQFQETGV*PPPGGL
Trigger: GAGTCCGCCGGGTGGTGGTCACACCCCAGTCTCCTG...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGCGGGACCACTACCGCTaGCGCCTCCGCCACTTCCAC +
Preference number: 4 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLRDHYR*RLRHFH
Trigger: GTGGAAGTGGCGGAGGCGGCAGCGGTAGTGGTCCCG...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCCTGGGAGCTGGAGGTTaGAGTGAGCTGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: SCARDEFDIQRRVRASEGLGAGG*SELRSR
Trigger: GCGCGATCTCAGCTCACTGCAACCTCCAGCTCCCAG...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGTTTGTACAAAGTGCCTaGTTTCAAGTGGGTGAAGGT +
Preference number: 4 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWFVQSA*FQVGEG
Trigger: ACCTTCACCCACTTGAAACCAGGCACTTTGTACAAA...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGTCATGCTCTTCATTTTaGGATCATCTAAGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWSCSSF*DHLSSP
Trigger: TGGGGAGCTTAGATGATCCCAAAATGAAGAGCATGA...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGTTTGCTTCACATGACTaGAATTTCTTGTGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWFASHD*NFLCQG
Trigger: TCCCTGGCACAAGAAATTCCAGTCATGTGAAGCAAA...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCAAGAAGGAGGGCTGTTaGGGCGGTTCTGGCGATCGA +
Preference number: 4 (lower is better)
Translates to: SCARDEFDIQRRVRASEGKKEGC*GGSGDR
Trigger: TCGATCGCCAGAACCGCCTCAACAGCCCTCCTTCTT...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGTTTGCTTTAATGAACTaGCTAAATGGTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWFALMN*LNGPAP
Trigger: TGGAGCTGGACCATTTAGTCAGTTCATTAAAGCAAA...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATAAGCCGCAGAGGGGCTaGAGGCTCCGCTTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNKPQRG*RLRLAP
Trigger: AGGAGCTAAGCGGAGCCTTCAGCCCCTCTGCGGCTT...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCAGAACTTCCCTCAACTaGCTTCCGGAGCTCCGCTGG +
Preference number: 4 (lower is better)
Translates to: SCARDEFDIQRRVRASEGRTSLN*LPELRW
Trigger: CCAGCGGAGCTCCGGAAGCCAGTTGAGGGAAGTTCT...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336824.8
CDS-3UTR CCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGTTACGGAATTGTACATaGCATACACCCTCACATGAT +
Preference number: 4 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWLRNCT*HTPSHD
Trigger: ATCATGTGAGGGTGTATGCCATGTACAATTCCGTAA...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCTCGGGTGCACAGCTGTaGGTGGTGAAGCTAACAGGC +
Preference number: 4 (lower is better)
Translates to: SCARDEFDIQRRVRASEGSGAQL*VVKLTG
Trigger: GCCTGTTAGCTTCACCACCCACAGCTGTGCACCCGA...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCGGTGCACTCCAGCTCTaGGCCATGGTACACTTCCGA +
Preference number: 4 (lower is better)
Translates to: SCARDEFDIQRRVRASEGGALQL*AMVHFR
Trigger: TCGGAAGTGTACCATGGCCCAGAGCTGGAGTGCACC...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGTGTCTCCTAGATCAATaGTGTAAGCAAGGATTTCAG +
Preference number: 4 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWCLLDQ*CKQGFQ
Trigger: CTGAAATCCTTGCTTACACCATTGATCTAGGAGACA...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCGCTCCGCTTAGCTCCTaGGAGGTGTCTAAACAGCGA +
Preference number: 4 (lower is better)
Translates to: SCARDEFDIQRRVRASEGAPLSS*EVSKQR
Trigger: TCGCTGTTTAGACACCTCTCAGGAGCTAAGCGGAGC...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGAAGCCGCAGAGGGGCTaGAGGCTCCGCTTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLKPQRG*RLRLAP
Trigger: AGGAGCTAAGCGGAGCCTTCAGCCCCTCTGCGGCTT...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGTCCAACTCATATTCTTaGAAGTCTGAATCATTCGAC +
Preference number: 4 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWSNSYS*KSESFD
Trigger: GTCGAATGATTCAGACTTGCAAGAATATGAGTTGGA...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGCTAACTATTGCACAATaGCCTCTTAAAGTTACTGCT +
Preference number: 4 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWLTIAQ*PLKVTA
Trigger: AGCAGTAACTTTAAGAGGGCATTGTGCAATAGTTAG...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp CGAAGTGCTCGTAATGAAGAAATATCTATGACACAGATCATGAAACATGAGAGACTTCCGGAGCTCCGCTaGCCCACACACCGGGTCGCC +
Preference number: 4 (lower is better)
Translates to: RSARNEEISMTQIMKHERLPELR*PTHRVA
Trigger: GGCGACCCGGTGTGTGGGCCAGCGGAGCTCCGGAAG...TCTCTCATGTTTCATGATCTGTGTCATAGATATTTCTTCATTACGAGCACTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423424.5
CDS-3UTR CCA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCCCAAGTGGGGCATCATaGCTACCTCTCCGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: SCARDEFDIQRRVRASEGPSGAS*LPLRSA
Trigger: TGCTGAACGGAGAGGTAGCCATGATGCCCCACTTGG...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCAGCTCGAACCAGCCTTaGTGCAGAAGGCATCTGAGG +
Preference number: 4 (lower is better)
Translates to: SCARDEFDIQRRVRASEGSSNQP*CRRHLR
Trigger: CCTCAGATGCCTTCTGCACCAAGGCTGGTTCGAGCT...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCAGTCCTCCAAGGCCTTaGTCAGCAAGAGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: SCARDEFDIQRRVRASEGSPPRP*SARAEL
Trigger: CAGCTCAGCTCTTGCTGACCAAGGCCTTGGAGGACT...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCTTCGAGCGGCCAGCCTaGATGTGTACCCCATTGCCG +
Preference number: 4 (lower is better)
Translates to: TISVNHGQWAEALNCHQFFERPA*MCTPLP
Trigger: CGGCAATGGGGTACACATTCAGGCTGGCCGCTCGAA...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCCTCGGTGGTCGACATTaGCCTGGTGCAATGCTTAGT +
Preference number: 4 (lower is better)
Translates to: SCARDEFDIQRRVRASEGLGGRH*PGAMLS
Trigger: ACTAAGCATTGCACCAGGTCAATGTCGACCACCGAG...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCTTTAGCTTCAGGCTCTaGGGACCAGCAGCAGCACAT +
Preference number: 4 (lower is better)
Translates to: SCARDEFDIQRRVRASEGFSFRL*GPAAAH
Trigger: ATGTGCTGCTGCTGGTCCTCAGAGCCTGAAGCTAAA...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGGGCAGGAGAATGGCATaGACCCGGGAGGTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLGRRMA*TREVEL
Trigger: AAGCTCCACCTCCCGGGTTCATGCCATTCTCCTGCC...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCTTCTCCAGCCTCGCTTaGTGCCTGGATTCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: SCARDEFDIQRRVRASEGFSSLA*CLDSEG
Trigger: TCCTTCAGAATCCAGGCAGCAAGCGAGGCTGGAGAA...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGATACACTGTGTCTGTTaGACCCTTTTGGAATATATT +
Preference number: 4 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWIHCVC*TLLEYI
Trigger: AATATATTCCAAAAGGGTGCAACAGACACAGTGTAT...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATGATGGGTTGGAGACATaGCTGAGGGGTAGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNDGLET*LRGSLG
Trigger: CCCCAAGCTACCCCTCAGCCATGTCTCCAACCCATC...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATGGTGCACTCCAGCTCTaGGCCATGGTACACTTCCGA +
Preference number: 4 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNGALQL*AMVHFR
Trigger: TCGGAAGTGTACCATGGCCCAGAGCTGGAGTGCACC...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCGTCAGGGGCAGACGCTaGCGTCTGGCAAAGGACAAG +
Preference number: 4 (lower is better)
Translates to: TISVNHGQWAEALNCHQFVRGRR*RLAKDK
Trigger: CTTGTCCTTTGCCAGACGCCAGCGTCTGCCCCTGAC...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCTTTCCAAGGTGTAGGTaGTCACTTCCTCGGGTGAAC +
Preference number: 4 (lower is better)
Translates to: SCARDEFDIQRRVRASEGFPRCR*SLPRVN
Trigger: GTTCACCCGAGGAAGTGATCACCTACACCTTGGAAA...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGACCCAGTGTGCCAGGTaGACAGAGGGAGATCTGGAC +
Preference number: 4 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLTQCAR*TEGDLD
Trigger: GTCCAGATCTCCCTCTGTTCACCTGGCACACTGGGT...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGACTGGGAGCTGGAGGTTaGAGTGAGCTGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRLGAGG*SELRSR
Trigger: GCGCGATCTCAGCTCACTGCAACCTCCAGCTCCCAG...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCTCCAGCTCTGGGCCATaGTACACTTCCGAGGCTACG +
Preference number: 4 (lower is better)
Translates to: TISVNHGQWAEALNCHQFSSSGP*YTSEAT
Trigger: CGTAGCCTCGGAAGTGTACCATGGCCCAGAGCTGGA...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCGCAGTGAGCCGAGATTaGGTCACTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: TISVNHGQWAEALNCHQFAVSRD*VTALQP
Trigger: AGGCTGGAGTGCAGTGACCCAATCTCGGCTCACTGC...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCACTGGTCTTCTCGGGTaGTGTAGGTTGACATTCCAT +
Preference number: 4 (lower is better)
Translates to: SCARDEFDIQRRVRASEGTGLLG*CRLTFH
Trigger: ATGGAATGTCAACCTACATCACCCGAGAAGACCAGT...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCCTGCCCCTGCTTGATTaGAGGCCTGTAGTCTACAGC +
Preference number: 4 (lower is better)
Translates to: TISVNHGQWAEALNCHQFLPLLD*RPVVYS
Trigger: GCTGTAGACTACAGGCCTTCAATCAAGCAGGGGCAG...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATGTTGGTCTGGAGGCCTaGGATTTGGAATGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNVGLEA*DLECGF
Trigger: GAAGCCACATTCCAAATCTCAGGCCTCCAGACCAAC...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGGCTCCGCTTAGCTCCTaGGAGGTGTCTAAACAGCGA +
Preference number: 4 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLAPLSS*EVSKQR
Trigger: TCGCTGTTTAGACACCTCTCAGGAGCTAAGCGGAGC...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATAGCTGGAGGTTGCAGTaGGCTGAGATCGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYSWRLQ*AEIAPL
Trigger: CAGTGGCGCGATCTCAGCTCACTGCAACCTCCAGCT...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGAAGGTGGAGCTTGCAGTaGGCCGAGATTGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRRWSLQ*AEIGSL
Trigger: CAGTGACCCAATCTCGGCTCACTGCAAGCTCCACCT...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGGCAGGAGAATGGCATaGACCCGGGAGGTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYGRRMA*TREVEL
Trigger: AAGCTCCACCTCCCGGGTTCATGCCATTCTCCTGCC...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCTTGGTCAGCAAGAGCTaGGCTGCTGCTGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: TISVNHGQWAEALNCHQFLVSKS*AAAVSA
Trigger: TGCAGAGACAGCAGCAGCTCAGCTCTTGCTGACCAA...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCCAGCAGGTCCTTGAATaGACTGAAGTGTTCCATCCT +
Preference number: 4 (lower is better)
Translates to: SCARDEFDIQRRVRASEGQQVLE*TEVFHP
Trigger: AGGATGGAACACTTCAGTGCATTCAAGGACCTGCTG...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCGAAAGGACACTCGGGTaGACAGCTGTGGGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: TISVNHGQWAEALNCHQFERTLG*TAVGGE
Trigger: TTCACCACCCACAGCTGTGCACCCGAGTGTCCTTTC...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCAAAGCTTTGTCAACTTaGAGTGCTTCTGGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: SCARDEFDIQRRVRASEGKALST*SASGSR
Trigger: TCGGGAGCCAGAAGCACTGCAAGTTGACAAAGCTTT...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGACTGCAGAAGGCCACCTaGCTGGCCTCCAAAAACACG +
Preference number: 4 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRLQKAT*LASKNT
Trigger: CGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCTGCAG...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGCAAGAGCTGAGCTGCTaGTGTCTCTGCAGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLQELSC*CLCRRP
Trigger: TGGCCTTCTGCAGAGACAGCAGCAGCTCAGCTCTTG...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGCAGCAAGAGCTGAGCTaGTGCTGTCTCTGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLQQELS*CCLCRR
Trigger: CCTTCTGCAGAGACAGCAGCAGCTCAGCTCTTGCTG...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATAGACTTTCAGAACACTaGCTGTGTCCGCCGGTACTG +
Preference number: 4 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNRLSEH*LCPPVL
Trigger: CAGTACCGGCGGACACAGCCAGTGTTCTGAAAGTCT...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCACCCAAAACCCTCGGTaGTCGACATTGACCTGGTGC +
Preference number: 4 (lower is better)
Translates to: TISVNHGQWAEALNCHQFTQNPR*STLTWC
Trigger: GCACCAGGTCAATGTCGACCACCGAGGGTTTTGGGT...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGATCCAGCTCTGGGCCATaGTACACTTCCGAGGCTACG +
Preference number: 4 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRSSSGP*YTSEAT
Trigger: CGTAGCCTCGGAAGTGTACCATGGCCCAGAGCTGGA...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCCCTTGTAGGTGTGGCTaGGTCCTCTGTAGATTGAAA +
Preference number: 4 (lower is better)
Translates to: SCARDEFDIQRRVRASEGPCRCG*VLCRLK
Trigger: TTTCAATCTACAGAGGACCCAGCCACACCTACAAGG...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGAGCAGTGAGCCGAGATTaGGTCACTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRAVSRD*VTALQP
Trigger: AGGCTGGAGTGCAGTGACCCAATCTCGGCTCACTGC...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCCGGTCATCATCATTGTaGCGTACATTCATGGAGAAC +
Preference number: 4 (lower is better)
Translates to: SCARDEFDIQRRVRASEGRSSSL*RTFMEN
Trigger: GTTCTCCATGAATGTACGTCACAATGATGATGACCG...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGGTTGGAGACATGGCTaGGGGGTAGCTTGGGGGATA +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYGWRHG*GVAWGI
Trigger: TATCCCCCAAGCTACCCCTCAGCCATGTCTCCAACC...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCTTGACACTAAAGCCATaGGATGTAACTGGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: SCARDEFDIQRRVRASEGLTLKP*DVTGPL
Trigger: CAAAGGCCCAGTTACATCTCATGGCTTTAGTGTCAA...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGGCCCTGCCCCTGCTTaGTTGAAGGCCTGTAGTCTA +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYGPAPA*LKACSL
Trigger: TAGACTACAGGCCTTCAATCAAGCAGGGGCAGGGCC...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCAAGGCACGCAGAAGGTaGATCAGGGTAGGCATCAAG +
Preference number: 4 (lower is better)
Translates to: TISVNHGQWAEALNCHQFKARRR*IRVGIK
Trigger: CTTGATGCCTACCCTGATTCACCTTCTGCGTGCCTT...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGAAGGCACGCAGAAGGTaGATCAGGGTAGGCATCAAG +
Preference number: 4 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLKARRR*IRVGIK
Trigger: CTTGATGCCTACCCTGATTCACCTTCTGCGTGCCTT...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGTTTAGCTTCAGGCTCTaGGGACCAGCAGCAGCACAT +
Preference number: 4 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLFSFRL*GPAAAH
Trigger: ATGTGCTGCTGCTGGTCCTCAGAGCCTGAAGCTAAA...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGGAAGGTATAGGTTTCTaGGAAGGGCCCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLEGIGF*EGPFSS
Trigger: GCTGGAGAAGGGCCCTTCTCAGAAACCTATACCTTC...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCGCAGTTTGCTTCACATaGCTGGAATTTCTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: SCARDEFDIQRRVRASEGAVCFT*LEFLVP
Trigger: TGGCACAAGAAATTCCAGTCATGTGAAGCAAACTGC...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCGAATGTGTACCCCATTaGCGGACAAAGCTTTGTCAA +
Preference number: 4 (lower is better)
Translates to: SCARDEFDIQRRVRASEGECVPH*RTKLCQ
Trigger: TTGACAAAGCTTTGTCCGGCAATGGGGTACACATTC...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGTCGAACCAGCCTTGGTaGAGAAGGCATCTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLSNQPW*RRHLRD
Trigger: ATCCCTCAGATGCCTTCTGCACCAAGGCTGGTTCGA...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATTCTGGCTTACTCCACTaGAACGTGACCCATGTGATG +
Preference number: 4 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNSGLLH*NVTHVM
Trigger: CATCACATGGGTCACGTTGCAGTGGAGTAAGCCAGA...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCTCCAGCCTCGCTTGCTaGCTGGATTCTGAAGGAGTA +
Preference number: 4 (lower is better)
Translates to: TISVNHGQWAEALNCHQFSSLAC*LDSEGV
Trigger: TACTCCTTCAGAATCCAGGCAGCAAGCGAGGCTGGA...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp GAAGAAATATCTATGACACAGATCATGAAACATGAGAGAGAACAAGGTAAGGGGAGAACTTCCCTCAACTaGCTTCCGGAGCTCCGCTGG +
Preference number: 4 (lower is better)
Translates to: EEISMTQIMKHEREQGKGRTSLN*LPELRW
Trigger: CCAGCGGAGCTCCGGAAGCCAGTTGAGGGAAGTTCT...CCCCTTACCTTGTTCTCTCTCATGTTTCATGATCTGTGTCATAGATATTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423424.5
CDS-3UTR CCA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCCTCTCCGTTCAGCAATaGTGGCAGTTCCAGAGGGAT +
Preference number: 4 (lower is better)
Translates to: TISVNHGQWAEALNCHQFLSVQQ*WQFQRD
Trigger: ATCCCTCTGGAACTGCCACCATTGCTGAACGGAGAG...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGACCAAGTGGGGCATCATaGCTACCTCTCCGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRPSGAS*LPLRSA
Trigger: TGCTGAACGGAGAGGTAGCCATGATGCCCCACTTGG...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATCTGGAGGCACATGAATaGGAGGAATGGATCCATTGG +
Preference number: 4 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNLEAHE*EEWIHW
Trigger: CCAATGGATCCATTCCTCCCATTCATGTGCCTCCAG...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATCTGTTGAGGCGGTTCTaGCGATCGATCTGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYLLRRF*RSIWRS
Trigger: AGACCGCCAGATCGATCGCCAGAACCGCCTCAACAG...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATAAGGAAAGACCACTGTaGGGTCCACAGGAAAGTCCA +
Preference number: 4 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNKERPL*GPQESP
Trigger: TGGACTTTCCTGTGGACCCCACAGTGGTCTTTCCTT...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATAACTTGCAGTGCTTCTaGCTCCCGAAGAAGCACTGT +
Preference number: 4 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNNLQCF*LPKKHC
Trigger: ACAGTGCTTCTTCGGGAGCCAGAAGCACTGCAAGTT...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCCTTGGCTATAACCACTaGTACCAATGTCGTTTCGAG +
Preference number: 4 (lower is better)
Translates to: SCARDEFDIQRRVRASEGLGYNH*YQCRFE
Trigger: CTCGAAACGACATTGGTACCAGTGGTTATAGCCAAG...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATGCCATGAGATGTAACTaGGCCTTTGACAAGCGGTCT +
Preference number: 4 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNAMRCN*AFDKRS
Trigger: AGACCGCTTGTCAAAGGCCCAGTTACATCTCATGGC...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGAACCCAAAACCCTCGGTaGTCGACATTGACCTGGTGC +
Preference number: 4 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRTQNPR*STLTWC
Trigger: GCACCAGGTCAATGTCGACCACCGAGGGTTTTGGGT...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCAGAAGGCCACCTGCCTaGCCTCCAAAAACACGTGAA +
Preference number: 4 (lower is better)
Translates to: TISVNHGQWAEALNCHQFRRPPA*PPKTRE
Trigger: TTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCACGAGAATAACCTGCTaGGCTGCATCTCCATTCACC +
Preference number: 4 (lower is better)
Translates to: TISVNHGQWAEALNCHQFTRITC*AASPFT
Trigger: GGTGAATGGAGATGCAGCTCAGCAGGTTATTCTCGT...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTTTCGAGCGGCCAGCCTaGATGTGTACCCCATTGCCG +
Preference number: 4 (lower is better)
Translates to: PWRKSGYLASFETWTYVIFERPA*MCTPLP
Trigger: CGGCAATGGGGTACACATTCAGGCTGGCCGCTCGAA...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCTCTCTAGCAAGTACTTaGGGATTTCTGAACCACCAT +
Preference number: 4 (lower is better)
Translates to: SCARDEFDIQRRVRASEGSLAST*GFLNHH
Trigger: ATGGTGGTTCAGAAATCCTCAAGTACTTGCTAGAGA...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATTTCCAACCTGTACTCTaGGATGTCAGCACCAGAACT +
Preference number: 4 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNFQPVL*DVSTRT
Trigger: AGTTCTGGTGCTGACATCTCAGAGTACAGGTTGGAA...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGAGAAGGTATAGGTTTCTaGGAAGGGCCCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSREGIGF*EGPFSS
Trigger: GCTGGAGAAGGGCCCTTCTCAGAAACCTATACCTTC...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGAGTTGGTCTGGAGGCCTaGGATTTGGAATGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRVGLEA*DLECGF
Trigger: GAAGCCACATTCCAAATCTCAGGCCTCCAGACCAAC...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGACACAGAGAGGTAAAGTaGCGTGTTCAGGTCACGCAG +
Preference number: 4 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRHREVK*RVQVTQ
Trigger: CTGCGTGACCTGAACACGTCACTTTACCTCTCTGTG...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATTTGGTCAGCAAGAGCTaGGCTGCTGCTGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYLVSKS*AAAVSA
Trigger: TGCAGAGACAGCAGCAGCTCAGCTCTTGCTGACCAA...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATCAGCAGGTCCTTGAATaGACTGAAGTGTTCCATCCT +
Preference number: 4 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNQQVLE*TEVFHP
Trigger: AGGATGGAACACTTCAGTGCATTCAAGGACCTGCTG...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGATTTTGTGCGGAGGCTTaGTGTACTGGTCTTCTCGGG +
Preference number: 4 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRFCAEA*CTGLLG
Trigger: CCCGAGAAGACCAGTACAGCAAGCCTCCGCACAAAA...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCCCAGGACAACACAACTaGTCTTGCCTGAATATTAGA +
Preference number: 4 (lower is better)
Translates to: SCARDEFDIQRRVRASEGPGQHN*SCLNIR
Trigger: TCTAATATTCAGGCAAGAGCAGTTGTGTTGTCCTGG...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATATTGACCTGGTGCAATaGTTAGTGTGCGAACAGGGA +
Preference number: 4 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNIDLVQ*LVCEQG
Trigger: TCCCTGTTCGCACACTAAGCATTGCACCAGGTCAAT...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATCAAGAGCTGAGCTGCTaGTGTCTCTGCAGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYQELSC*CLCRRP
Trigger: TGGCCTTCTGCAGAGACAGCAGCAGCTCAGCTCTTG...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AACATACATATAAGCTGTCCCTTTCAACTAGGATATGGGGAAAAGAAGTCAACCCCAAGTGGGGCATCATaGCTACCTCTCCGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: NIHISCPFQLGYGEKKSTPSGAS*LPLRSA
Trigger: TGCTGAACGGAGAGGTAGCCATGATGCCCCACTTGG...GGTTGACTTCTTTTCCCCATATCCTAGTTGAAAGGGACAGCTTATATGTATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000421757.5
CDS-3UTR CCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGTCTCCATTCACCAAGTaGGGCATCATGGCTACCTCT +
Preference number: 4 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLSPFTK*GIMATS
Trigger: AGAGGTAGCCATGATGCCCCACTTGGTGAATGGAGA...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCAAGGAAAGACCACTGTaGGGTCCACAGGAAAGTCCA +
Preference number: 4 (lower is better)
Translates to: TISVNHGQWAEALNCHQFKERPL*GPQESP
Trigger: TGGACTTTCCTGTGGACCCCACAGTGGTCTTTCCTT...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCAACTTGCAGTGCTTCTaGCTCCCGAAGAAGCACTGT +
Preference number: 4 (lower is better)
Translates to: TISVNHGQWAEALNCHQFNLQCF*LPKKHC
Trigger: ACAGTGCTTCTTCGGGAGCCAGAAGCACTGCAAGTT...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATAGCTCGAACCAGCCTTaGTGCAGAAGGCATCTGAGG +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYSSNQP*CRRHLR
Trigger: CCTCAGATGCCTTCTGCACCAAGGCTGGTTCGAGCT...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGCAGACGCTGGCGTCTaGCAAAGGACAAGTTCACTG +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYADAGV*QRTSSL
Trigger: CAGTGAACTTGTCCTTTGCCAGACGCCAGCGTCTGC...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATCAGCAGCATGTGTCTTaGAGTTACTGTCTCCCCATT +
Preference number: 4 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNQQHVS*SYCLPI
Trigger: AATGGGGAGACAGTAACTCCAAGACACATGCTGCTG...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCTGGAGGCCTGAGATTTaGAATGTGGCTTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: TISVNHGQWAEALNCHQFWRPEI*NVASSP
Trigger: GGGAGAAGAAGCCACATTCCAAATCTCAGGCCTCCA...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGAAGAAGGCCACCTGCCTaGCCTCCAAAAACACGTGAA +
Preference number: 4 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRRRPPA*PPKTRE
Trigger: TTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AAGCTTCCAAAAACCTGGAAGGACTCTTTCAGGTGGACTAATAAGCATCATCATAGAACTTCCCTCAACTaGCTTCCTTCCCTAGGGCTG +
Preference number: 4 (lower is better)
Translates to: KLPKTWKDSFRWTNKHHHRTSLN*LPSLGL
Trigger: CAGCCCTAGGGAAGGAAGCCAGTTGAGGGAAGTTCT...ATGATGATGCTTATTAGTCCACCTGAAAGAGTCCTTCCAGGTTTTTGGAAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421757.5
CDS-3UTR TCA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATCGGTCATCATCATTGTaGCGTACATTCATGGAGAAC +
Preference number: 4 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNRSSSL*RTFMEN
Trigger: GTTCTCCATGAATGTACGTCACAATGATGATGACCG...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGAATGGATCCATTGGGTaGCATCATGGGAACTTCAGC +
Preference number: 4 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLNGSIG*HHGNFS
Trigger: GCTGAAGTTCCCATGATGTCACCCAATGGATCCATT...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCGTAGTAAGCCGTGTGTaGGTTATGAATAAAATGTGG +
Preference number: 4 (lower is better)
Translates to: SCARDEFDIQRRVRASEGVVSRV*VMNKMW
Trigger: CCACATTTTATTCATAACTCACACACGGCTTACTAC...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTAAGAAGGAGGGCTGTTaGGGCGGTTCTGGCGATCGA +
Preference number: 4 (lower is better)
Translates to: PWRKSGYLASFETWTYVIKKEGC*GGSGDR
Trigger: TCGATCGCCAGAACCGCCTCAACAGCCCTCCTTCTT...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCATATTCTTGCAAGTCTaGATCATTCGACTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: SCARDEFDIQRRVRASEGIFLQV*IIRLWA
Trigger: AGCCCAAAGTCGAATGATTCAGACTTGCAAGAATAT...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGGGTGCAGAAGGCATCTaGGGGATATTTCCTAATGTG +
Preference number: 4 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLGAEGI*GIFPNV
Trigger: CACATTAGGAAATATCCCTCAGATGCCTTCTGCACC...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTTGTGTCCGCCGGTACTaGTGCAGCATGCTCGGAGTT +
Preference number: 4 (lower is better)
Translates to: PWRKSGYLASFETWTYVICVRRY*CSMLGV
Trigger: AACTCCGAGCATGCTGCATCAGTACCGGCGGACACA...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTGGCCCTGCCCCTGCTTaGTTGAAGGCCTGTAGTCTA +
Preference number: 4 (lower is better)
Translates to: PWRKSGYLASFETWTYVIGPAPA*LKACSL
Trigger: TAGACTACAGGCCTTCAATCAAGCAGGGGCAGGGCC...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATCAAAGCCAAGCACAATaGTGGCTGCAAACTGTTCAT +
Preference number: 4 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNQSQAQ*WLQTVH
Trigger: ATGAACAGTTTGCAGCCATCATTGTGCTTGGCTTTG...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATTTTTGTGCGGAGGCTTaGTGTACTGGTCTTCTCGGG +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYFCAEA*CTGLLG
Trigger: CCCGAGAAGACCAGTACAGCAAGCCTCCGCACAAAA...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGCTTTGGGCTGCTTCTTaGTCGTCGCTCTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLLWAAS*SSLCFL
Trigger: AAGAAAACAGAGCGACGAGCAAGAAGCAGCCCAAAG...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCCTTTGGGCTGCTTCTTaGTCGTCGCTCTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: TISVNHGQWAEALNCHQFLWAAS*SSLCFL
Trigger: AAGAAAACAGAGCGACGAGCAAGAAGCAGCCCAAAG...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCTTTGTCAACTTGCAGTaGTTCTGGCTCCCGAAGAAG +
Preference number: 4 (lower is better)
Translates to: TISVNHGQWAEALNCHQFFVNLQ*FWLPKK
Trigger: CTTCTTCGGGAGCCAGAAGCACTGCAAGTTGACAAA...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTTTCCAGGAAGCAGGTTaGCGACGGTGCACTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PWRKSGYLASFETWTYVIFQEAG*RRCTPA
Trigger: AGCTGGAGTGCACCGTCGGCAACCTGCTTCCTGGAA...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGTCTACAGCAATACTGTaGAGCAGGCAACAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLSTAIL*SRQQVS
Trigger: AGAGACCTGTTGCCTGCTGCACAGTATTGCTGTAGA...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATTTTCAGATCCGTTATTaGACGGCTCTTCCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNFQIRY*TALPSS
Trigger: TGAACTGGGAAGAGCCGTGCAATAACGGATCTGAAA...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATAGATCTTTCATAACATaGATGGTGGTGTTGCCCACG +
Preference number: 4 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNRSFIT*MVVLPT
Trigger: CGTGGGCAACACCACCATGCATGTTATGAAAGATCT...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATTCCAGCCTCGCTTGCTaGCTGGATTCTGAAGGAGTA +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYSSLAC*LDSEGV
Trigger: TACTCCTTCAGAATCCAGGCAGCAAGCGAGGCTGGA...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATTTCTCCAGCCTCGCTTaGTGCCTGGATTCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYFSSLA*CLDSEG
Trigger: TCCTTCAGAATCCAGGCAGCAAGCGAGGCTGGAGAA...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATAGTTCCAGAGGGATTTaGTCGGTCATCATCATTGTG +
Preference number: 4 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNSSRGI*SVIIIV
Trigger: CACAATGATGATGACCGACCAAATCCCTCTGGAACT...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTCTGTTGAGGCGGTTCTaGCGATCGATCTGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: PWRKSGYLASFETWTYVILLRRF*RSIWRS
Trigger: AGACCGCCAGATCGATCGCCAGAACCGCCTCAACAG...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCTTACGGAATTGTACATaGCATACACCCTCACATGAT +
Preference number: 4 (lower is better)
Translates to: SCARDEFDIQRRVRASEGLRNCT*HTPSHD
Trigger: ATCATGTGAGGGTGTATGCCATGTACAATTCCGTAA...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTTCGGGTGCACAGCTGTaGGTGGTGAAGCTAACAGGC +
Preference number: 4 (lower is better)
Translates to: PWRKSGYLASFETWTYVISGAQL*VVKLTG
Trigger: GCCTGTTAGCTTCACCACCCACAGCTGTGCACCCGA...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGGTGCCTGGTTTCAAGTaGGTGAAGGTGTATTCGGTA +
Preference number: 4 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLVPGFK*VKVYSV
Trigger: TACCGAATACACCTTCACCCACTTGAAACCAGGCAC...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCCAGCAGCATGTGTCTTaGAGTTACTGTCTCCCCATT +
Preference number: 4 (lower is better)
Translates to: TISVNHGQWAEALNCHQFQQHVS*SYCLPI
Trigger: AATGGGGAGACAGTAACTCCAAGACACATGCTGCTG...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCCCTTGTAGGTGTGGCTaGGTCCTCTGTAGATTGAAA +
Preference number: 4 (lower is better)
Translates to: TISVNHGQWAEALNCHQFPCRCG*VLCRLK
Trigger: TTTCAATCTACAGAGGACCCAGCCACACCTACAAGG...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCACCTGTAGTCTGTGTTaGTCTGGAGGCCTGAGATTT +
Preference number: 4 (lower is better)
Translates to: TISVNHGQWAEALNCHQFTCSLC*SGGLRF
Trigger: AAATCTCAGGCCTCCAGACCAACACAGACTACAGGT...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATAGAACTTCCCTCAACTaGCTTCCTTCCCTAGGGCTG +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYRTSLN*LPSLGL
Trigger: CAGCCCTAGGGAAGGAAGCCAGTTGAGGGAAGTTCT...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415807.7
CDS-3UTR TCA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGAACTGGTCTTCTCGGGTaGTGTAGGTTGACATTCCAT +
Preference number: 4 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRTGLLG*CRLTFH
Trigger: ATGGAATGTCAACCTACATCACCCGAGAAGACCAGT...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATTTTCCAAGGTGTAGGTaGTCACTTCCTCGGGTGAAC +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYFPRCR*SLPRVN
Trigger: GTTCACCCGAGGAAGTGATCACCTACACCTTGGAAA...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCTTGACACTAAAGCCATaGGATGTAACTGGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: TISVNHGQWAEALNCHQFLTLKP*DVTGPL
Trigger: CAAAGGCCCAGTTACATCTCATGGCTTTAGTGTCAA...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTCTGCCCCTGCTTGATTaGAGGCCTGTAGTCTACAGC +
Preference number: 4 (lower is better)
Translates to: PWRKSGYLASFETWTYVILPLLD*RPVVYS
Trigger: GCTGTAGACTACAGGCCTTCAATCAAGCAGGGGCAG...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGCAAAGCCAAGCACAATaGTGGCTGCAAACTGTTCAT +
Preference number: 4 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLQSQAQ*WLQTVH
Trigger: ATGAACAGTTTGCAGCCATCATTGTGCTTGGCTTTG...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCATTCAATCACTTCATTaGTACCTCAAAGAACAGCCT +
Preference number: 4 (lower is better)
Translates to: SCARDEFDIQRRVRASEGIQSLH*YLKEQP
Trigger: AGGCTGTTCTTTGAGGTATCAATGAAGTGATTGAAT...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCAATAACCTGCTGAGCTaGATCTCCATTCACCAAGTG +
Preference number: 4 (lower is better)
Translates to: TISVNHGQWAEALNCHQFNNLLS*ISIHQV
Trigger: CACTTGGTGAATGGAGATGCAGCTCAGCAGGTTATT...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGCCCGAAAGAATGTCTTaGACCCTCTTTACTTCCAAC +
Preference number: 4 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLPERMS*TLFTSN
Trigger: GTTGGAAGTAAAGAGGGTGCAAGACATTCTTTCGGG...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTGAAAGGACACTCGGGTaGACAGCTGTGGGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: PWRKSGYLASFETWTYVIERTLG*TAVGGE
Trigger: TTCACCACCCACAGCTGTGCACCCGAGTGTCCTTTC...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGATTGGTGCCTTCCACTaGAGGGTTAGTGAACTTTTG +
Preference number: 4 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLIGAFH*RVSELL
Trigger: CAAAAGTTCACTAACCCTGCAGTGGAAGGCACCAAT...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGAATTGACCTGGTGCAATaGTTAGTGTGCGAACAGGGA +
Preference number: 4 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRIDLVQ*LVCEQG
Trigger: TCCCTGTTCGCACACTAAGCATTGCACCAGGTCAAT...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGAAAATACAAGGTGCTTTaGATTGTCCAGGAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRKYKVL*IVQEAL
Trigger: CAGGGCCTCCTGGACAATGCAAAGCACCTTGTATTT...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCAGATCTTTCATAACATaGATGGTGGTGTTGCCCACG +
Preference number: 4 (lower is better)
Translates to: TISVNHGQWAEALNCHQFRSFIT*MVVLPT
Trigger: CGTGGGCAACACCACCATGCATGTTATGAAAGATCT...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCCTAACTATTGCACAATaGCCTCTTAAAGTTACTGCT +
Preference number: 4 (lower is better)
Translates to: SCARDEFDIQRRVRASEGLTIAQ*PLKVTA
Trigger: AGCAGTAACTTTAAGAGGGCATTGTGCAATAGTTAG...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGAGTTCCAGAGGGATTTaGTCGGTCATCATCATTGTG +
Preference number: 4 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLSSRGI*SVIIIV
Trigger: CACAATGATGATGACCGACCAAATCCCTCTGGAACT...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp CGTAATGAAGAAATATCTATGACACAGATCATGAAACATGAGAGAGAACAAGGTCCAAGTGGGGCATCATaGCTACCTCTCCGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: RNEEISMTQIMKHEREQGPSGAS*LPLRSA
Trigger: TGCTGAACGGAGAGGTAGCCATGATGCCCCACTTGG...ACCTTGTTCTCTCTCATGTTTCATGATCTGTGTCATAGATATTTCTTCATTACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421757.5
ENST00000423424.5
CDS-3UTR CCA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGACATTGGGTGACATCATaGGAACTTCAGCAGGTCCTT +
Preference number: 4 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRHWVTS*ELQQVL
Trigger: AAGGACCTGCTGAAGTTCCCATGATGTCACCCAATG...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCGAGGAATGGATCCATTaGGTGACATCATGGGAACTT +
Preference number: 4 (lower is better)
Translates to: TISVNHGQWAEALNCHQFEEWIH*VTSWEL
Trigger: AAGTTCCCATGATGTCACCCAATGGATCCATTCCTC...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATCTGGAGGCACATGAATaGGAGGAATGGATCCATTGG +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYLEAHE*EEWIHW
Trigger: CCAATGGATCCATTCCTCCCATTCATGTGCCTCCAG...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCCTCTCCAGTGTATTTTaGGTGGAAAAGGTTATCATT +
Preference number: 4 (lower is better)
Translates to: SCARDEFDIQRRVRASEGLSSVF*VEKVII
Trigger: AATGATAACCTTTTCCACCCAAAATACACTGGAGAG...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGCCATGAGATGTAACTaGGCCTTTGACAAGCGGTCT +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYAMRCN*AFDKRS
Trigger: AGACCGCTTGTCAAAGGCCCAGTTACATCTCATGGC...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTGCAGACGCTGGCGTCTaGCAAAGGACAAGTTCACTG +
Preference number: 4 (lower is better)
Translates to: PWRKSGYLASFETWTYVIADAGV*QRTSSL
Trigger: CAGTGAACTTGTCCTTTGCCAGACGCCAGCGTCTGC...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATTGGAGGCCTGAGATTTaGAATGTGGCTTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYWRPEI*NVASSP
Trigger: GGGAGAAGAAGCCACATTCCAAATCTCAGGCCTCCA...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCCTTTTAGTTGGCCCATaGAGGAAATCTGGATATTTA +
Preference number: 4 (lower is better)
Translates to: SCARDEFDIQRRVRASEGLLVGP*RKSGYL
Trigger: TAAATATCCAGATTTCCTCCATGGGCCAACTAAAAG...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGCAATCACCTTTTAGTTaGCCCATGGAGGAAATCTGG +
Preference number: 4 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLQSPFS*PMEEIW
Trigger: CCAGATTTCCTCCATGGGCCAACTAAAAGGTGATTG...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR CAA 72 bp GGGCAGTCTTATCTGAGTGAACATATCTTCTGTATGTaGCTGTTGCTGTGTGGTAATACTCTGACAACACTG +
Preference number: 4 (lower is better)
Translates to: GQSYLSEHIFCM*LLLCGNTLTTL
Trigger: CAGTGTTGTCAGAGTATTACCACACAGCAACAGCAACATACAGAAGATATGTTCACTCAGATAAGACTGCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR CAA 72 bp GATACACTGTGTCTGTTGCACCCTTTTGGAATATATTaGCACCTCCAACTCTTAAATGTCCCTGAGGTACTC +
Preference number: 4 (lower is better)
Translates to: DTLCLLHPFGIY*HLQLLNVPEVL
Trigger: GAGTACCTCAGGGACATTTAAGAGTTGGAGGTGCAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATTCGGGTGATGTAGGTTaGCATTCCATAAAATGGTAT +
Preference number: 4 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNSGDVG*HSIKWY
Trigger: ATACCATTTTATGGAATGTCAACCTACATCACCCGA...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCACAACTGCTCTTGCCTaGATATTAGAAACCTGTGGT +
Preference number: 4 (lower is better)
Translates to: TISVNHGQWAEALNCHQFTTALA*ILETCG
Trigger: ACCACAGGTTTCTAATATTCAGGCAAGAGCAGTTGT...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGACAACTGCTCTTGCCTaGATATTAGAAACCTGTGGT +
Preference number: 4 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLTTALA*ILETCG
Trigger: ACCACAGGTTTCTAATATTCAGGCAAGAGCAGTTGT...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCGTAGTTGGTGATTTTTaGACCGTTGTCAATTGGTGC +
Preference number: 4 (lower is better)
Translates to: TISVNHGQWAEALNCHQFVVGDF*TVVNWC
Trigger: GCACCAATTGACAACGGTTCAAAAATCACCAACTAC...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGAAGCAGTGGTAATTTCTaGGACATCAGAATAGGGACC +
Preference number: 4 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRSSGNF*DIRIGT
Trigger: GGTCCCTATTCTGATGTCTCAGAAATTACCACTGCT...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATGGGTCCTCTGTAGATTaGAATAAACCTCTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNGSSVD*NKPLVS
Trigger: AGAAACAAGAGGTTTATTTCAATCTACAGAGGACCC...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTCACAGAGAGGTAAAGTaGCGTGTTCAGGTCACGCAG +
Preference number: 4 (lower is better)
Translates to: PWRKSGYLASFETWTYVIHREVK*RVQVTQ
Trigger: CTGCGTGACCTGAACACGTCACTTTACCTCTCTGTG...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCACTCTTAAATGTCCCTaGGGTACTCGAACATTATGG +
Preference number: 4 (lower is better)
Translates to: TISVNHGQWAEALNCHQFTLKCP*GTRTLW
Trigger: CCATAATGTTCGAGTACCTCAGGGACATTTAAGAGT...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGAAATAACCTGCTGAGCTaGATCTCCATTCACCAAGTG +
Preference number: 4 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRNNLLS*ISIHQV
Trigger: CACTTGGTGAATGGAGATGCAGCTCAGCAGGTTATT...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp AAGGTAATAAGCAGGAATAAAGCTTCCAAAAACCTGGAAGGACTCTTTCAGGTGAATAACCTGCTGAGCTaGATCTCCATTCACCAAGTG +
Preference number: 4 (lower is better)
Translates to: KVISRNKASKNLEGLFQVNNLLS*ISIHQV
Trigger: CACTTGGTGAATGGAGATGCAGCTCAGCAGGTTATT...CACCTGAAAGAGTCCTTCCAGGTTTTTGGAAGCTTTATTCCTGCTTATTACCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421757.5
CDS-3UTR GCA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTCATTCGACTTTGGGCTaGTTCTTGCTCGTCGCTCTG +
Preference number: 4 (lower is better)
Translates to: PWRKSGYLASFETWTYVIHSTLG*FLLVAL
Trigger: CAGAGCGACGAGCAAGAAGCAGCCCAAAGTCGAATG...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGAGGTACTGATGCAGCATaGTCGGAGTTTGTACAAAGT +
Preference number: 4 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRGTDAA*SEFVQS
Trigger: ACTTTGTACAAACTCCGAGCATGCTGCATCAGTACC...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATAAATACAAGGTGCTTTaGATTGTCCAGGAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYKYKVL*IVQEAL
Trigger: CAGGGCCTCCTGGACAATGCAAAGCACCTTGTATTT...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGAAGCACAATGATGGCTaGAAACTGTTCATCAGTAGG +
Preference number: 4 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLKHNDG*KLFISR
Trigger: CCTACTGATGAACAGTTTGCAGCCATCATTGTGCTT...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATTTTAGAAAATGCAGATaGTGTGGTCATAGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNFRKCR*CGHSGS
Trigger: TGACCCACTATGACCACAGCATCTGCATTTTCTAAA...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp ACTTTCCATGAAGGACTTCTCAAGGGCAAGGTAATAAGCAGGAATAAAGCTTCCCCACTTCATCTTGAATaGACTGAAGTGTTCCATCCT +
Preference number: 4 (lower is better)
Translates to: TFHEGLLKGKVISRNKASPLHLE*TEVFHP
Trigger: AGGATGGAACACTTCAGTGCATTCAAGATGAAGTGG...GGAAGCTTTATTCCTGCTTATTACCTTGCCCTTGAGAAGTCCTTCATGGAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421757.5
CDS-3UTR CCA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGATGTGACGTACATTCATaGAGAACTTCCCTCAACTGG +
Preference number: 4 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRCDVHS*RTSLNW
Trigger: CCAGTTGAGGGAAGTTCTCCATGAATGTACGTCACA...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp CGAAGTGCTCGTAATGAAGAAATATCTATGACACAGATCATGAAACATGAGAGATCCGTTCAGCAATGGTaGCAGTTCCAGAGGGATTTG +
Preference number: 4 (lower is better)
Translates to: RSARNEEISMTQIMKHERSVQQW*QFQRDL
Trigger: CAAATCCCTCTGGAACTGCCACCATTGCTGAACGGA...TCTCTCATGTTTCATGATCTGTGTCATAGATATTTCTTCATTACGAGCACTTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421757.5
ENST00000423424.5
CDS-3UTR CCA 90 bp CGTAATGAAGAAATATCTATGACACAGATCATGAAACATGAGAGAGAACAAGGTCTCTCCGTTCAGCAATaGTGGCAGTTCCAGAGGGAT +
Preference number: 4 (lower is better)
Translates to: RNEEISMTQIMKHEREQGLSVQQ*WQFQRD
Trigger: ATCCCTCTGGAACTGCCACCATTGCTGAACGGAGAG...ACCTTGTTCTCTCTCATGTTTCATGATCTGTGTCATAGATATTTCTTCATTACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421757.5
ENST00000423424.5
CDS-3UTR CCA 90 bp GCTCGTAATGAAGAAATATCTATGACACAGATCATGAAACATGAGAGAGAACAACTCTCCGTTCAGCAATaGTGGCAGTTCCAGAGGGAT +
Preference number: 4 (lower is better)
Translates to: ARNEEISMTQIMKHEREQLSVQQ*WQFQRD
Trigger: ATCCCTCTGGAACTGCCACCATTGCTGAACGGAGAG...TTGTTCTCTCTCATGTTTCATGATCTGTGTCATAGATATTTCTTCATTACGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421757.5
ENST00000423424.5
CDS-3UTR CCA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGACATGAATGGGAGGAATaGATCCATTGGGTGACATCA +
Preference number: 4 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRHEWEE*IHWVTS
Trigger: TGATGTCACCCAATGGATCCATTCCTCCCATTCATG...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCATGATAATCTGTTGCTaGTCTAAGATCTTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: SCARDEFDIQRRVRASEGMIICC*SKIFQV
Trigger: AACCTGAAAGATCTTAGACCAGCAACAGATTATCAT...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCACATCCCACTCTAAGTaGACTTCTTTGTGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: TISVNHGQWAEALNCHQFTSHSK*TSLCFG
Trigger: ACCAAAGCACAAAGAAGTCCACTTAGAGTGGGATGT...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATACCTGTAGTCTGTGTTaGTCTGGAGGCCTGAGATTT +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYTCSLC*SGGLRF
Trigger: AAATCTCAGGCCTCCAGACCAACACAGACTACAGGT...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGGTAAATCATGGACAATaGGCAGAGGCACTAAACTGT +
Preference number: 4 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLVNHGQ*AEALNC
Trigger: ACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTAC...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AAGGTAATAAGCAGGAATAAAGCTTCCAAAAACCTGGAAGGACTCTTTCAGGTGAAGCTTCCAAAAACCTaGAAGGACTCTTTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: KVISRNKASKNLEGLFQVKLPKT*KDSFRW
Trigger: CCACCTGAAAGAGTCCTTCCAGGTTTTTGGAAGCTT...CACCTGAAAGAGTCCTTCCAGGTTTTTGGAAGCTTTATTCCTGCTTATTACCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000421757.5
CDS-3UTR CCA 90 bp AAAAGAAGTCAACCCAGTGTTTCCACTTTCCATGAAGGACTTCTCAAGGGCAAGCTTTCAACTAGGATATaGGGAAAAGAAGTCAACCCA +
Preference number: 4 (lower is better)
Translates to: KRSQPSVSTFHEGLLKGKLSTRI*GKEVNP
Trigger: TGGGTTGACTTCTTTTCCCCATATCCTAGTTGAAAG...CTTGCCCTTGAGAAGTCCTTCATGGAAAGTGGAAACACTGGGTTGACTTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421757.5
CDS-3UTR TCA 90 bp CAGTCTAACATACATATAAGCTGTCCCTTTCAACTAGGATATGGGGAAAAGAAGCGGTCATCATCATTGTaGCGTACATTCATGGAGAAC +
Preference number: 4 (lower is better)
Translates to: QSNIHISCPFQLGYGEKKRSSSL*RTFMEN
Trigger: GTTCTCCATGAATGTACGTCACAATGATGATGACCG...CTTCTTTTCCCCATATCCTAGTTGAAAGGGACAGCTTATATGTATGTTAGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421757.5
CDS-3UTR TCA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCGTAGTAAGCCGTGTGTaGGTTATGAATAAAATGTGG +
Preference number: 4 (lower is better)
Translates to: TISVNHGQWAEALNCHQFVVSRV*VMNKMW
Trigger: CCACATTTTATTCATAACTCACACACGGCTTACTAC...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGTCGGGTGATGTAGGTTaGCATTCCATAAAATGGTAT +
Preference number: 4 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLSGDVG*HSIKWY
Trigger: ATACCATTTTATGGAATGTCAACCTACATCACCCGA...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGAGTAGTTGGTGATTTTTaGACCGTTGTCAATTGGTGC +
Preference number: 4 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRVVGDF*TVVNWC
Trigger: GCACCAATTGACAACGGTTCAAAAATCACCAACTAC...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATAGCAGTGGTAATTTCTaGGACATCAGAATAGGGACC +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYSSGNF*DIRIGT
Trigger: GGTCCCTATTCTGATGTCTCAGAAATTACCACTGCT...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGGGGTCCTCTGTAGATTaGAATAAACCTCTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLGSSVD*NKPLVS
Trigger: AGAAACAAGAGGTTTATTTCAATCTACAGAGGACCC...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGTGCATTCTGGTTACTTaGTTTCTTATACAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLCILVT*FLIQAA
Trigger: AGCTGCCTGTATAAGAAATCAAGTAACCAGAATGCA...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATTCAAAAATAATGAGCTaGCACATAAGAAGACTGCTC +
Preference number: 4 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNSKIMS*HIRRLL
Trigger: GAGCAGTCTTCTTATGTGTCAGCTCATTATTTTTGA...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATATGTTTGTTTCCCCATaGCTTTGGTATGGGAATATT +
Preference number: 4 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNMFVSP*LWYGNI
Trigger: AATATTCCCATACCAAAGTCATGGGGAAACAAACAT...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp CGAAGTGCTCGTAATGAAGAAATATCTATGACACAGATCATGAAACATGAGAGAATCCACTTCAGACATTaGAAAGCCACACCGCGAAGT +
Preference number: 4 (lower is better)
Translates to: RSARNEEISMTQIMKHERIHFRH*KATPRS
Trigger: ACTTCGCGGTGTGGCTTTTCAATGTCTGAAGTGGAT...TCTCTCATGTTTCATGATCTGTGTCATAGATATTTCTTCATTACGAGCACTTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421757.5
CDS-3UTR GCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATCCCGAAAGAATGTCTTaGACCCTCTTTACTTCCAAC +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYPERMS*TLFTSN
Trigger: GTTGGAAGTAAAGAGGGTGCAAGACATTCTTTCGGG...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGCAACACAACTGCTCTTaGCTGAATATTAGAAACCTG +
Preference number: 4 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLQHNCS*LNIRNL
Trigger: CAGGTTTCTAATATTCAGGCAAGAGCAGTTGTGTTG...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGGTACTGATGCAGCATaGTCGGAGTTTGTACAAAGT +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYGTDAA*SEFVQS
Trigger: ACTTTGTACAAACTCCGAGCATGCTGCATCAGTACC...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGAAAGTGGACTTCTTTGTaGTTTGGTCTACCCAAAACC +
Preference number: 4 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRKWTSL*FGLPKT
Trigger: GGTTTTGGGTAGACCAAAGCACAAAGAAGTCCACTT...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp TCACCTGCCTTAAACTACAGTAAAGCCAAGATTGTTAATAATATAGTTCCTTGCTCCGTTCAGCAATGGTaGCAGTTCCAGAGGGATTTG +
Preference number: 4 (lower is better)
Translates to: SPALNYSKAKIVNNIVPCSVQQW*QFQRDL
Trigger: CAAATCCCTCTGGAACTGCCACCATTGCTGAACGGA...GCAAGGAACTATATTATTAACAATCTTGGCTTTACTGTAGTTTAAGGCAGGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421757.5
CDS-3UTR CCA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTTCTCCATTCACCAAGTaGGGCATCATGGCTACCTCT +
Preference number: 4 (lower is better)
Translates to: PWRKSGYLASFETWTYVISPFTK*GIMATS
Trigger: AGAGGTAGCCATGATGCCCCACTTGGTGAATGGAGA...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp CGTAATGAAGAAATATCTATGACACAGATCATGAAACATGAGAGAGAACAAGGTTCTCCATTCACCAAGTaGGGCATCATGGCTACCTCT +
Preference number: 4 (lower is better)
Translates to: RNEEISMTQIMKHEREQGSPFTK*GIMATS
Trigger: AGAGGTAGCCATGATGCCCCACTTGGTGAATGGAGA...ACCTTGTTCTCTCTCATGTTTCATGATCTGTGTCATAGATATTTCTTCATTACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421757.5
ENST00000423424.5
CDS-3UTR CCA 90 bp AGTGCTCGTAATGAAGAAATATCTATGACACAGATCATGAAACATGAGAGAGAATCTCCATTCACCAAGTaGGGCATCATGGCTACCTCT +
Preference number: 4 (lower is better)
Translates to: SARNEEISMTQIMKHERESPFTK*GIMATS
Trigger: AGAGGTAGCCATGATGCCCCACTTGGTGAATGGAGA...TTCTCTCTCATGTTTCATGATCTGTGTCATAGATATTTCTTCATTACGAGCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421757.5
ENST00000423424.5
CDS-3UTR CCA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATTGTGAAAGTCTCACCTaGATTAACTTGAACGAGAAT +
Preference number: 4 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNCESLT*INLNEN
Trigger: ATTCTCGTTCAAGTTAATCCAGGTGAGACTTTCACA...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATCATGAATGGGAGGAATaGATCCATTGGGTGACATCA +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYHEWEE*IHWVTS
Trigger: TGATGTCACCCAATGGATCCATTCCTCCCATTCATG...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATCTTGGCTATAACCACTaGTACCAATGTCGTTTCGAG +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYLGYNH*YQCRFE
Trigger: CTCGAAACGACATTGGTACCAGTGGTTATAGCCAAG...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGAAACAAGAACTTCGCTTaGACAGCTTTTTCCTTCCGT +
Preference number: 4 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRNKNFA*TAFSFR
Trigger: ACGGAAGGAAAAAGCTGTCCAAGCGAAGTTCTTGTT...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGAACATCCCACTCTAAGTaGACTTCTTTGTGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRTSHSK*TSLCFG
Trigger: ACCAAAGCACAAAGAAGTCCACTTAGAGTGGGATGT...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGTCTGTTGCACCCTTTTaGAATATATTTGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLSVAPF*NIFAPP
Trigger: TGGAGGTGCAAATATATTCCAAAAGGGTGCAACAGA...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCCACACTTCAGCTTCCTaGTGGTTAAATGATAGTATG +
Preference number: 4 (lower is better)
Translates to: TISVNHGQWAEALNCHQFHTSAS*WLNDSM
Trigger: CATACTATCATTTAACCACCAGGAAGCTGAAGTGTG...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGATTTGCTTCACATGACTaGAATTTCTTGTGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRFASHD*NFLCQG
Trigger: TCCCTGGCACAAGAAATTCCAGTCATGTGAAGCAAA...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATCAATCACCTTTTAGTTaGCCCATGGAGGAAATCTGG +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYQSPFS*PMEEIW
Trigger: CCAGATTTCCTCCATGGGCCAACTAAAAGGTGATTG...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp CGAAGTGCTCGTAATGAAGAAATATCTATGACACAGATCATGAAACATGAGAGACGGTCATCATCATTGTaGCGTACATTCATGGAGAAC +
Preference number: 4 (lower is better)
Translates to: RSARNEEISMTQIMKHERRSSSL*RTFMEN
Trigger: GTTCTCCATGAATGTACGTCACAATGATGATGACCG...TCTCTCATGTTTCATGATCTGTGTCATAGATATTTCTTCATTACGAGCACTTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421757.5
ENST00000423424.5
CDS-3UTR TCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGCTAAAAGGTAGTTGGTaGTTTTTGAACCGTTGTCAA +
Preference number: 4 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLLKGSW*FLNRCQ
Trigger: TTGACAACGGTTCAAAAATCACCAACTACCTTTTAG...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTGGTGCAGAAGGCATCTaGGGGATATTTCCTAATGTG +
Preference number: 4 (lower is better)
Translates to: PWRKSGYLASFETWTYVIGAEGI*GIFPNV
Trigger: CACATTAGGAAATATCCCTCAGATGCCTTCTGCACC...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATTCTCTAGCAAGTACTTaGGGATTTCTGAACCACCAT +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYSLAST*GFLNHH
Trigger: ATGGTGGTTCAGAAATCCTCAAGTACTTGCTAGAGA...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGCTGTCCCATGATAAATaGGTTCTAAGGATTCTTCAT +
Preference number: 4 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLLSHDK*VLRILH
Trigger: ATGAAGAATCCTTAGAACTCATTTATCATGGGACAG...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGATTTGCTTTAATGAACTaGCTAAATGGTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRFALMN*LNGPAP
Trigger: TGGAGCTGGACCATTTAGTCAGTTCATTAAAGCAAA...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATCACTTTTGGTTGTGCTaGAGGTATAGGTTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYHFWLC*RYRFLR
Trigger: TCTCAGAAACCTATACCTTCAGCACAACCAAAAGTG...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCTCAAAAATAATGAGCTaGCACATAAGAAGACTGCTC +
Preference number: 4 (lower is better)
Translates to: TISVNHGQWAEALNCHQFSKIMS*HIRRLL
Trigger: GAGCAGTCTTCTTATGTGTCAGCTCATTATTTTTGA...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGATTCAATCACTTCATTaGTACCTCAAAGAACAGCCT +
Preference number: 4 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLIQSLH*YLKEQP
Trigger: AGGCTGTTCTTTGAGGTATCAATGAAGTGATTGAAT...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCATGTTTGTTTCCCCATaGCTTTGGTATGGGAATATT +
Preference number: 4 (lower is better)
Translates to: TISVNHGQWAEALNCHQFMFVSP*LWYGNI
Trigger: AATATTCCCATACCAAAGTCATGGGGAAACAAACAT...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATCCAGGACAACACAACTaGTCTTGCCTGAATATTAGA +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYPGQHN*SCLNIR
Trigger: TCTAATATTCAGGCAAGAGCAGTTGTGTTGTCCTGG...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTTTTGTCAACTTGCAGTaGTTCTGGCTCCCGAAGAAG +
Preference number: 4 (lower is better)
Translates to: PWRKSGYLASFETWTYVIFVNLQ*FWLPKK
Trigger: CTTCTTCGGGAGCCAGAAGCACTGCAAGTTGACAAA...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATAAGTGGACTTCTTTGTaGTTTGGTCTACCCAAAACC +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYKWTSL*FGLPKT
Trigger: GGTTTTGGGTAGACCAAAGCACAAAGAAGTCCACTT...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATAAGCACAATGATGGCTaGAAACTGTTCATCAGTAGG +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYKHNDG*KLFISR
Trigger: CCTACTGATGAACAGTTTGCAGCCATCATTGTGCTT...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp CGAAGTGCTCGTAATGAAGAAATATCTATGACACAGATCATGAAACATGAGAGAAGTTCCAGAGGGATTTaGTCGGTCATCATCATTGTG +
Preference number: 4 (lower is better)
Translates to: RSARNEEISMTQIMKHERSSRGI*SVIIIV
Trigger: CACAATGATGATGACCGACCAAATCCCTCTGGAACT...TCTCTCATGTTTCATGATCTGTGTCATAGATATTTCTTCATTACGAGCACTTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421757.5
ENST00000423424.5
CDS-3UTR CCA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTGTGCCTGGTTTCAAGTaGGTGAAGGTGTATTCGGTA +
Preference number: 4 (lower is better)
Translates to: PWRKSGYLASFETWTYVIVPGFK*VKVYSV
Trigger: TACCGAATACACCTTCACCCACTTGAAACCAGGCAC...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATAATGAACTGACTAAATaGTCCAGCTCCAATTTCATT +
Preference number: 4 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNNELTK*SSSNFI
Trigger: AATGAAATTGGAGCTGGACCATTTAGTCAGTTCATT...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATTCATGCTCTTCATTTTaGGATCATCTAAGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYSCSSF*DHLSSP
Trigger: TGGGGAGCTTAGATGATCCCAAAATGAAGAGCATGA...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTATCTTCAATCACCTGTaGGATATAACCTGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: PWRKSGYLASFETWTYVIIFNHL*DITWRH
Trigger: GTGCCTCCAGGTTATATCTCACAGGTGATTGAAGAT...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATATATTCTTGCAAGTCTaGATCATTCGACTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYIFLQV*IIRLWA
Trigger: AGCCCAAAGTCGAATGATTCAGACTTGCAAGAATAT...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTGTACTTGAGGATTTCTaGACCACCATTGTCCTTAGG +
Preference number: 4 (lower is better)
Translates to: PWRKSGYLASFETWTYVIVLEDF*TTIVLR
Trigger: CCTAAGGACAATGGTGGTTCAGAAATCCTCAAGTAC...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGACTGTCCCATGATAAATaGGTTCTAAGGATTCTTCAT +
Preference number: 4 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRLSHDK*VLRILH
Trigger: ATGAAGAATCCTTAGAACTCATTTATCATGGGACAG...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATTTTCAACAATTTCTTTaGGGACAAAGGGCAGTTTGC +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYFQQFL*GQRAVC
Trigger: GCAAACTGCCCTTTGTCCTCAAAGAAATTGTTGAAA...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp AGTGCTCGTAATGAAGAAATATCTATGACACAGATCATGAAACATGAGAGAGAATGTTTCCACTTTCCATaGAGGACTTCTCAAGGGCAA +
Preference number: 4 (lower is better)
Translates to: SARNEEISMTQIMKHERECFHFP*RTSQGQ
Trigger: TTGCCCTTGAGAAGTCCTTCATGGAAAGTGGAAACA...TTCTCTCTCATGTTTCATGATCTGTGTCATAGATATTTCTTCATTACGAGCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421757.5
CDS-3UTR GCA 90 bp AGTGCTCGTAATGAAGAAATATCTATGACACAGATCATGAAACATGAGAGAGAAAATAACCTGCTGAGCTaGATCTCCATTCACCAAGTG +
Preference number: 4 (lower is better)
Translates to: SARNEEISMTQIMKHERENNLLS*ISIHQV
Trigger: CACTTGGTGAATGGAGATGCAGCTCAGCAGGTTATT...TTCTCTCTCATGTTTCATGATCTGTGTCATAGATATTTCTTCATTACGAGCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421757.5
ENST00000423424.5
CDS-3UTR GCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATAAGTGTTCCATCCTCTaGTCTTATTGTGAAAGTCTC +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYKCSIL*SYCESL
Trigger: GAGACTTTCACAATAAGAGCAGAGGATGGAACACTT...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATCAACACAACTGCTCTTaGCTGAATATTAGAAACCTG +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYQHNCS*LNIRNL
Trigger: CAGGTTTCTAATATTCAGGCAAGAGCAGTTGTGTTG...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTTTTCAGATCCGTTATTaGACGGCTCTTCCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: PWRKSGYLASFETWTYVIFQIRY*TALPSS
Trigger: TGAACTGGGAAGAGCCGTGCAATAACGGATCTGAAA...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp CGTAATGAAGAAATATCTATGACACAGATCATGAAACATGAGAGAGAACAAGGTAGTTCCAGAGGGATTTaGTCGGTCATCATCATTGTG +
Preference number: 4 (lower is better)
Translates to: RNEEISMTQIMKHEREQGSSRGI*SVIIIV
Trigger: CACAATGATGATGACCGACCAAATCCCTCTGGAACT...ACCTTGTTCTCTCTCATGTTTCATGATCTGTGTCATAGATATTTCTTCATTACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421757.5
ENST00000423424.5
CDS-3UTR CCA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTGAGGAATGGATCCATTaGGTGACATCATGGGAACTT +
Preference number: 4 (lower is better)
Translates to: PWRKSGYLASFETWTYVIEEWIH*VTSWEL
Trigger: AAGTTCCCATGATGTCACCCAATGGATCCATTCCTC...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGACTCTCCAGTGTATTTTaGGTGGAAAAGGTTATCATT +
Preference number: 4 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRLSSVF*VEKVII
Trigger: AATGATAACCTTTTCCACCCAAAATACACTGGAGAG...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATTGTCTCCTAGATCAATaGTGTAAGCAAGGATTTCAG +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYCLLDQ*CKQGFQ
Trigger: CTGAAATCCTTGCTTACACCATTGATCTAGGAGACA...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTCCGGTAGGTGGTTTCTaGAAGGAGATCTTTCATAAC +
Preference number: 4 (lower is better)
Translates to: PWRKSGYLASFETWTYVIPVGGF*KEIFHN
Trigger: GTTATGAAAGATCTCCTTCCAGAAACCACCTACCGG...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGAATGAACTGACTAAATaGTCCAGCTCCAATTTCATT +
Preference number: 4 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLNELTK*SSSNFI
Trigger: AATGAAATTGGAGCTGGACCATTTAGTCAGTTCATT...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGACTTCAGCTTCCTGGTaGTTAAATGATAGTATGAAA +
Preference number: 4 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLTSASW*LNDSMK
Trigger: TTTCATACTATCATTTAACCACCAGGAAGCTGAAGT...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGAGCTTCTTTTGAAACATaGACATATGTGATTGTGGCT +
Preference number: 4 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRASFET*TYVIVA
Trigger: AGCCACAATCACATATGTCCATGTTTCAAAAGAAGC...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
3UTR CAA 72 bp TCTTATCTGAGTGAACATATCTTCTGTATGTTGCTGTaGCTGTGTGGTAATACTCTGACAACACTGAAATCC +
Preference number: 4 (lower is better)
Translates to: SYLSEHIFCMLL*LCGNTLTTLKS
Trigger: GGATTTCAGTGTTGTCAGAGTATTACCACACAGCAACAGCAACATACAGAAGATATGTTCACTCAGATAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTCACTTTTGGTTGTGCTaGAGGTATAGGTTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: PWRKSGYLASFETWTYVIHFWLC*RYRFLR
Trigger: TCTCAGAAACCTATACCTTCAGCACAACCAAAAGTG...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATTCCAACTCATATTCTTaGAAGTCTGAATCATTCGAC +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYSNSYS*KSESFD
Trigger: GTCGAATGATTCAGACTTGCAAGAATATGAGTTGGA...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATCACATGATAATCTGTTaGTGGTCTAAGATCTTTCAG +
Preference number: 4 (lower is better)
Translates to: VGPWRKSGYLASFETWTYHMIIC*WSKIFQ
Trigger: CTGAAAGATCTTAGACCAGCAACAGATTATCATGTG...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp AGTGCTCGTAATGAAGAAATATCTATGACACAGATCATGAAACATGAGAGAGAACCACTTCATCTTGAATaGACTGAAGTGTTCCATCCT +
Preference number: 4 (lower is better)
Translates to: SARNEEISMTQIMKHEREPLHLE*TEVFHP
Trigger: AGGATGGAACACTTCAGTGCATTCAAGATGAAGTGG...TTCTCTCTCATGTTTCATGATCTGTGTCATAGATATTTCTTCATTACGAGCACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421757.5
ENST00000423424.5
CDS-3UTR CCA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGAATGATAATCTGTTGCTaGTCTAAGATCTTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRMIICC*SKIFQV
Trigger: AACCTGAAAGATCTTAGACCAGCAACAGATTATCAT...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTTTTGTACAAAGTGCCTaGTTTCAAGTGGGTGAAGGT +
Preference number: 4 (lower is better)
Translates to: PWRKSGYLASFETWTYVIFVQSA*FQVGEG
Trigger: ACCTTCACCCACTTGAAACCAGGCACTTTGTACAAA...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGAACTTCAGCTTCCTGGTaGTTAAATGATAGTATGAAA +
Preference number: 4 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRTSASW*LNDSMK
Trigger: TTTCATACTATCATTTAACCACCAGGAAGCTGAAGT...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTTTTAGAAAATGCAGATaGTGTGGTCATAGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: PWRKSGYLASFETWTYVIFRKCR*CGHSGS
Trigger: TGACCCACTATGACCACAGCATCTGCATTTTCTAAA...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTTCTGTTGCACCCTTTTaGAATATATTTGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: PWRKSGYLASFETWTYVISVAPF*NIFAPP
Trigger: TGGAGGTGCAAATATATTCCAAAAGGGTGCAACAGA...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTCTAAAAGGTAGTTGGTaGTTTTTGAACCGTTGTCAA +
Preference number: 4 (lower is better)
Translates to: PWRKSGYLASFETWTYVILKGSW*FLNRCQ
Trigger: TTGACAACGGTTCAAAAATCACCAACTACCTTTTAG...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR TCA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTGCAGTCTTATCTGAGTaGACATATCTTCTGTATGTT +
Preference number: 4 (lower is better)
Translates to: PWRKSGYLASFETWTYVIAVLSE*TYLLYV
Trigger: AACATACAGAAGATATGTTCACTCAGATAAGACTGC...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTCACATGATAATCTGTTaGTGGTCTAAGATCTTTCAG +
Preference number: 4 (lower is better)
Translates to: PWRKSGYLASFETWTYVIHMIIC*WSKIFQ
Trigger: CTGAAAGATCTTAGACCAGCAACAGATTATCATGTG...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTTGTGAAAGTCTCACCTaGATTAACTTGAACGAGAAT +
Preference number: 4 (lower is better)
Translates to: PWRKSGYLASFETWTYVICESLT*INLNEN
Trigger: ATTCTCGTTCAAGTTAATCCAGGTGAGACTTTCACA...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CCA 90 bp AGTGCTCGTAATGAAGAAATATCTATGACACAGATCATGAAACATGAGAGAGAATGTGAAAGTCTCACCTaGATTAACTTGAACGAGAAT +
Preference number: 4 (lower is better)
Translates to: SARNEEISMTQIMKHERECESLT*INLNEN
Trigger: ATTCTCGTTCAAGTTAATCCAGGTGAGACTTTCACA...TTCTCTCTCATGTTTCATGATCTGTGTCATAGATATTTCTTCATTACGAGCACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421757.5
ENST00000423424.5
CDS-3UTR CCA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTCTTTTAGTTGGCCCATaGAGGAAATCTGGATATTTA +
Preference number: 4 (lower is better)
Translates to: PWRKSGYLASFETWTYVILLVGP*RKSGYL
Trigger: TAAATATCCAGATTTCCTCCATGGGCCAACTAAAAG...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR GCA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTATATCTTCTGTATGTTaGTGTTGCTGTGTGGTAATA +
Preference number: 4 (lower is better)
Translates to: PWRKSGYLASFETWTYVIISSVC*CCCVVI
Trigger: TATTACCACACAGCAACAGCAACATACAGAAGATAT...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS GCA 90 bp TCAGAGCCCTCACCCGGAAGCGATACACGGTTCCAGGAAGCAGGTTaGCGACGGTGCACTCCAGCTCTGGGCCATGGTACACTTCCGAGG +
Preference number: 5 (lower is better)
Translates to: SEPSPGSDTRFQEAG*RRCTPALGHGTLPR
Trigger: CCTCGGAAGTGTACCATGGCCCAGAGCTGGAGTGCACCGTCGGCAACCTGCTTCCTGGAACCGTGTATCGCTTCCGGGTGAGGGCTCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
CDS CCA 90 bp GTTCCAGGAAGCAGGTTGCCGACGGTGCACTCCAGCTCTGGGCCATaGTACACTTCCGAGGCTACGTCTTCGGGCTCCGTCATCTCCACG +
Preference number: 5 (lower is better)
Translates to: VPGSRLPTVHSSSGP*YTSEATSSGSVIST
Trigger: CGTGGAGATGACGGAGCCCGAAGACGTAGCCTCGGAAGTGTACCATGGCCCAGAGCTGGAGTGCACCGTCGGCAACCTGCTTCCTGGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
CDS GCA 90 bp TCACCCGGAAGCGATACACGGTTCCAGGAAGCAGGTTGCCGACGGTaGACTCCAGCTCTGGGCCATGGTACACTTCCGAGGCTACGTCTT +
Preference number: 5 (lower is better)
Translates to: SPGSDTRFQEAGCRR*TPALGHGTLPRLRL
Trigger: AAGACGTAGCCTCGGAAGTGTACCATGGCCCAGAGCTGGAGTGCACCGTCGGCAACCTGCTTCCTGGAACCGTGTATCGCTTCCGGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
CDS CCA 90 bp ATACACGGTTCCAGGAAGCAGGTTGCCGACGGTGCACTCCAGCTCTaGGCCATGGTACACTTCCGAGGCTACGTCTTCGGGCTCCGTCAT +
Preference number: 5 (lower is better)
Translates to: IHGSRKQVADGALQL*AMVHFRGYVFGLRH
Trigger: ATGACGGAGCCCGAAGACGTAGCCTCGGAAGTGTACCATGGCCCAGAGCTGGAGTGCACCGTCGGCAACCTGCTTCCTGGAACCGTGTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
CDS-3UTR CAA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGTGGCTGAGGGGTAGCTaGGGGGATAACACTCAGGAG +
Preference number: 5 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWWLRGS*GDNTQE
Trigger: CTCCTGAGTGTTATCCCCCAAGCTACCCCTCAGCCA...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGAGGCAGGGGAATCACTaGAACCTGGGAGCTGGAGGT +
Preference number: 5 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWRQGNH*NLGAGG
Trigger: ACCTCCAGCTCCCAGGTTCAAGTGATTCCCCTGCCT...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGGTAGCACACCACCTCTaGGCTATAACCACTGGTACC +
Preference number: 5 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWVAHHL*AITTGT
Trigger: GGTACCAGTGGTTATAGCCAAGAGGTGGTGTGCTAC...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGCAGATCGAGACCATCTaGGCCAACATGGTGAAACCC +
Preference number: 5 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWQIETI*ANMVKP
Trigger: GGGTTTCACCATGTTGGCCAAGATGGTCTCGATCTG...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGCTGAATCATTCGACTTaGGGCTGCTTCTTGCTCGTC +
Preference number: 5 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWLNHST*GCFLLV
Trigger: GACGAGCAAGAAGCAGCCCAAAGTCGAATGATTCAG...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGTTTCCATCTCGTCCTTaGTCTGATAAGGCCACCTCG +
Preference number: 5 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWFPSRP*SDKATS
Trigger: CGAGGTGGCCTTATCAGACAAAGGACGAGATGGAAA...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGGGACTTCTTTGTGCTTaGGTCTACCCAAAACCCTCG +
Preference number: 5 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWGLLCA*VYPKPS
Trigger: CGAGGGTTTTGGGTAGACCAAAGCACAAAGAAGTCC...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGGAAATACAAGGTGCTTaGCATTGTCCAGGAGGCCCT +
Preference number: 5 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWEIQGA*HCPGGP
Trigger: AGGGCCTCCTGGACAATGCAAAGCACCTTGTATTTC...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS TCA 90 bp GTTATTGCACGGCTCTTCCCAGTTCAGTACAAGGCACGCAGAAGGTaGATCAGGGTAGGCATCAAGGGGCTCCTCCTCCAGGACACAGAG +
Preference number: 5 (lower is better)
Translates to: VIARLFPVQYKARRR*IRVGIKGLLLQDTE
Trigger: CTCTGTGTCCTGGAGGAGGAGCCCCTTGATGCCTACCCTGATTCACCTTCTGCGTGCCTTGTACTGAACTGGGAAGAGCCGTGCAATAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
CDS TCA 90 bp TGTAATACAAAAGCCGCAGAGGGGCTGAAGGCTCCGCTTAGCTCCTaGGAGGTGTCTAAACAGCGACGACACGCACATACGCGGAACCTG +
Preference number: 5 (lower is better)
Translates to: CNTKAAEGLKAPLSS*EVSKQRRHAHTRNL
Trigger: CAGGTTCCGCGTATGTGCGTGTCGTCGCTGTTTAGACACCTCTCAGGAGCTAAGCGGAGCCTTCAGCCCCTCTGCGGCTTTTGTATTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
CDS-3UTR CAA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGAACTTCAGCAGGTCCTaGAATGCACTGAAGTGTTCC +
Preference number: 5 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWNFSRS*NALKCS
Trigger: GGAACACTTCAGTGCATTCAAGGACCTGCTGAAGTT...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGGATCCCTTTACGGAATaGTACATGGCATACACCCTC +
Preference number: 5 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWDPFTE*YMAYTL
Trigger: GAGGGTGTATGCCATGTACAATTCCGTAAAGGGATC...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGATTTCTGAACCACCATaGTCCTTAGGGGGATCCCAT +
Preference number: 5 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWISEPP*SLGGSH
Trigger: ATGGGATCCCCCTAAGGACAATGGTGGTTCAGAAAT...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGATTTCAGATCCGTTATaGCACGGCTCTTCCCAGTTC +
Preference number: 5 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWISDPL*HGSSQF
Trigger: GAACTGGGAAGAGCCGTGCAATAACGGATCTGAAAT...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS GCA 90 bp GGTACCAATGTCGTTTCGAGCGGCCAGCCTGAATGTGTACCCCATTaGCGGACAAAGCTTTGTCAACTTGCAGTGCTTCTGGCTCCCGAA +
Preference number: 5 (lower is better)
Translates to: GTNVVSSGQPECVPH*RTKLCQLAVLLAPE
Trigger: TTCGGGAGCCAGAAGCACTGCAAGTTGACAAAGCTTTGTCCGGCAATGGGGTACACATTCAGGCTGGCCGCTCGAAACGACATTGGTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000469491.5
CDS CCA 90 bp GTCCTTAGGGGGATCCCATTTGACACTAAAGCCATGAGATGTAACTaGGCCTTTGACAAGCGGTCTGGTAGGAGGTCCAGGCCTGTCAGG +
Preference number: 5 (lower is better)
Translates to: VLRGIPFDTKAMRCN*AFDKRSGRRSRPVR
Trigger: CCTGACAGGCCTGGACCTCCTACCAGACCGCTTGTCAAAGGCCCAGTTACATCTCATGGCTTTAGTGTCAAATGGGATCCCCCTAAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000469491.5
CDS-3UTR CAA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGCTTGCTCACCATATATaGTGTGGGGAAGATGATGCT +
Preference number: 5 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWLAHHI*CGEDDA
Trigger: AGCATCATCTTCCCCACACAATATATGGTGAGCAAG...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGTCCCGAAAGAATGTCTaGCACCCTCTTTACTTCCAA +
Preference number: 5 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWSRKNV*HPLYFQ
Trigger: TTGGAAGTAAAGAGGGTGCAAGACATTCTTTCGGGA...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS CCA 90 bp TTCCAGAGGGATTTGGTCGGTCATCATCATTGTGACGTACATTCATaGAGAACTTCCCTCAACTGGCTTCCGGAGCTCCGCTGGCCCACA +
Preference number: 5 (lower is better)
Translates to: FQRDLVGHHHCDVHS*RTSLNWLPELRWPT
Trigger: TGTGGGCCAGCGGAGCTCCGGAAGCCAGTTGAGGGAAGTTCTCCATGAATGTACGTCACAATGATGATGACCGACCAAATCCCTCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000423424.5
CDS CCA 90 bp TCCGCCGGTACTGATGCAGCATGCTCGGAGTTTGTACAAAGTGCCTaGTTTCAAGTGGGTGAAGGTGTATTCGGTAGCCGACCCACTGTA +
Preference number: 5 (lower is better)
Translates to: SAGTDAACSEFVQSA*FQVGEGVFGSRPTV
Trigger: TACAGTGGGTCGGCTACCGAATACACCTTCACCCACTTGAAACCAGGCACTTTGTACAAACTCCGAGCATGCTGCATCAGTACCGGCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
CDS-3UTR CAA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGAGCCATTGTATACTGTaGTGCAGCTGCTTTTGTAGA +
Preference number: 5 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWSHCIL*CSCFCR
Trigger: TCTACAAAAGCAGCTGCACAACAGTATACAATGGCT...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS GCA 90 bp GAGACTTTCAGAACACTGGCTGTGTCCGCCGGTACTGATGCAGCATaGTCGGAGTTTGTACAAAGTGCCTGGTTTCAAGTGGGTGAAGGT +
Preference number: 5 (lower is better)
Translates to: ETFRTLAVSAGTDAA*SEFVQSAWFQVGEG
Trigger: ACCTTCACCCACTTGAAACCAGGCACTTTGTACAAACTCCGAGCATGCTGCATCAGTACCGGCGGACACAGCCAGTGTTCTGAAAGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
CDS CCA 90 bp TCCATTCACCAAGTGGGGCATCATGGCTACCTCTCCGTTCAGCAATaGTGGCAGTTCCAGAGGGATTTGGTCGGTCATCATCATTGTGAC +
Preference number: 5 (lower is better)
Translates to: SIHQVGHHGYLSVQQ*WQFQRDLVGHHHCD
Trigger: GTCACAATGATGATGACCGACCAAATCCCTCTGGAACTGCCACCATTGCTGAACGGAGAGGTAGCCATGATGCCCCACTTGGTGAATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000421757.5
ENST00000423424.5
ENST00000469491.5
CDS CCA 90 bp CTAAACAGCGACGACACGCACATACGCGGAACCTGTAGTCTGTGTTaGTCTGGAGGCCTGAGATTTGGAATGTGGCTTCTTCTCCCTTGT +
Preference number: 5 (lower is better)
Translates to: LNSDDTHIRGTCSLC*SGGLRFGMWLLLPC
Trigger: ACAAGGGAGAAGAAGCCACATTCCAAATCTCAGGCCTCCAGACCAACACAGACTACAGGTTCCGCGTATGTGCGTGTCGTCGCTGTTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
CDS CCA 90 bp GCAGCAAAACATACCCCATTTGACACTAAAGCCATGAGATGTAACTaGGCCTTTGACAAGCGGTCTGGTAGGAGGTCCAGGCCTGTCAGG +
Preference number: 5 (lower is better)
Translates to: AAKHTPFDTKAMRCN*AFDKRSGRRSRPVR
Trigger: CCTGACAGGCCTGGACCTCCTACCAGACCGCTTGTCAAAGGCCCAGTTACATCTCATGGCTTTAGTGTCAAATGGGGTATGTTTTGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494000.1
CDS TCA 90 bp GCAATGGTGGCAGTTCCAGAGGGATTTGGTCGGTCATCATCATTGTaGCGTACATTCATGGAGAACTTCCCTCAACTGGCTTCCGGAGCT +
Preference number: 5 (lower is better)
Translates to: AMVAVPEGFGRSSSL*RTFMENFPQLASGA
Trigger: AGCTCCGGAAGCCAGTTGAGGGAAGTTCTCCATGAATGTACGTCACAATGATGATGACCGACCAAATCCCTCTGGAACTGCCACCATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000423424.5
CDS TCA 90 bp CTTGGCTATAACCACTGGTACCAATGTCGTTTCGAGCGGCCAGCCTaGATGTGTACCCCATTGCCGGACAAAGCTTTGTCAACTTGCAGT +
Preference number: 5 (lower is better)
Translates to: LGYNHWYQCRFERPA*MCTPLPDKALSTCS
Trigger: ACTGCAAGTTGACAAAGCTTTGTCCGGCAATGGGGTACACATTCAGGCTGGCCGCTCGAAACGACATTGGTACCAGTGGTTATAGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000469491.5
CDS GCA 90 bp GGGTCCACAGGAAAGTCCAACAGGGGGAGCCCAGGACAACACAACTaGTCTTGCCTGAATATTAGAAACCTGTGGTTTCTCTATTCCCGA +
Preference number: 5 (lower is better)
Translates to: GSTGKSNRGSPGQHN*SCLNIRNLWFLYSR
Trigger: TCGGGAATAGAGAAACCACAGGTTTCTAATATTCAGGCAAGAGCAGTTGTGTTGTCCTGGGCTCCCCCTGTTGGACTTTCCTGTGGACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000469491.5
CDS CCA 90 bp ATTCACCAAGTGGGGCATCATGGCTACCTCTCCGTTCAGCAATGGTaGCAGTTCCAGAGGGATTTGGTCGGTCATCATCATTGTGACGTA +
Preference number: 5 (lower is better)
Translates to: IHQVGHHGYLSVQQW*QFQRDLVGHHHCDV
Trigger: TACGTCACAATGATGATGACCGACCAAATCCCTCTGGAACTGCCACCATTGCTGAACGGAGAGGTAGCCATGATGCCCCACTTGGTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000421757.5
ENST00000423424.5
ENST00000469491.5
CDS-3UTR CAA 90 bp AGGCCGAGGCGGGCAGATCACGAGGTCAGATCGAGACCATCTTGGCCAACATGGTACTGTGTGCTTCTTTaGAGATTTTTCACAGTACAG +
Preference number: 5 (lower is better)
Translates to: RPRRADHEVRSRPSWPTWYCVLL*RFFTVQ
Trigger: CTGTACTGTGAAAAATCTCAAAAGAAGCACACAGTA...CCATGTTGGCCAAGATGGTCTCGATCTGACCTCGTGATCTGCCCGCCTCGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGGTTCCAGGAAGCAGGTaGCCGACGGTGCACTCCAGC +
Preference number: 5 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLVPGSR*PTVHSS
Trigger: GCTGGAGTGCACCGTCGGCAACCTGCTTCCTGGAAC...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS TCA 90 bp CGGCATATCTCCAGGTCCGGTAACAGGTGGGTAGTAAGCCGTGTGTaGGTTATGAATAAAATGTGGATGGTGAGTCAGATAGGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: RHISRSGNRWVVSRV*VMNKMWMVSQIGRE
Trigger: CTCCCTCCCTATCTGACTCACCATCCACATTTTATTCATAACTCACACACGGCTTACTACCCACCTGTTACCGGACCTGGAGATATGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000443501.1
ENST00000469491.5
CDS TCA 90 bp TTCATCCTCCTGAATTTCCAAGGTGTAGGTGATCACTTCCTCGGGTaGACAGCCTTCTGGCTTACTCCACTGCAACGTGACCCATGTGAT +
Preference number: 5 (lower is better)
Translates to: FILLNFQGVGDHFLG*TAFWLTPLQRDPCD
Trigger: ATCACATGGGTCACGTTGCAGTGGAGTAAGCCAGAAGGCTGTTCACCCGAGGAAGTGATCACCTACACCTTGGAAATTCAGGAGGATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000469491.5
ENST00000494000.1
CDS TCA 90 bp ACACGCACATACGCGGAACCTGTAGTCTGTGTTGGTCTGGAGGCCTaGGATTTGGAATGTGGCTTCTTCTCCCTTGTACACCTGTTTGTA +
Preference number: 5 (lower is better)
Translates to: TRTYAEPVVCVGLEA*DLECGFFSLVHLFV
Trigger: TACAAACAGGTGTACAAGGGAGAAGAAGCCACATTCCAAATCTCAGGCCTCCAGACCAACACAGACTACAGGTTCCGCGTATGTGCGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
CDS TCA 90 bp GCAATGGTGGCAGTTCCAGAGGGATTTGGTCGGTCATCATCATTGTaGCGTACATTCATGGAGAACTTCCCTCAACTGGCTTCCACCATC +
Preference number: 5 (lower is better)
Translates to: AMVAVPEGFGRSSSL*RTFMENFPQLASTI
Trigger: GATGGTGGAAGCCAGTTGAGGGAAGTTCTCCATGAATGTACGTCACAATGATGATGACCGACCAAATCCCTCTGGAACTGCCACCATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416957.5
CDS TCA 90 bp GCAATGGTGGCAGTTCCAGAGGGATTTGGTCGGTCATCATCATTGTaGCGTACATTCATGGAGAACTTCCCTCAACTGGCTTCCTTCCCT +
Preference number: 5 (lower is better)
Translates to: AMVAVPEGFGRSSSL*RTFMENFPQLASFP
Trigger: AGGGAAGGAAGCCAGTTGAGGGAAGTTCTCCATGAATGTACGTCACAATGATGATGACCGACCAAATCCCTCTGGAACTGCCACCATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415807.7
ENST00000421757.5
ENST00000469491.5
CDS CCA 90 bp ATGGCTACCTCTCCGTTCAGCAATGGTGGCAGTTCCAGAGGGATTTaGTCGGTCATCATCATTGTGACGTACATTCATGGAGAACTTCCC +
Preference number: 5 (lower is better)
Translates to: MATSPFSNGGSSRGI*SVIIIVTYIHGELP
Trigger: GGGAAGTTCTCCATGAATGTACGTCACAATGATGATGACCGACCAAATCCCTCTGGAACTGCCACCATTGCTGAACGGAGAGGTAGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000421757.5
ENST00000423424.5
ENST00000469491.5
CDS CCA 90 bp TTCCAGAGGGATTTGGTCGGTCATCATCATTGTGACGTACATTCATaGAGAACTTCCCTCAACTGGCTTCCTTCCCTAGGGCTGAAACGC +
Preference number: 5 (lower is better)
Translates to: FQRDLVGHHHCDVHS*RTSLNWLPSLGLKR
Trigger: GCGTTTCAGCCCTAGGGAAGGAAGCCAGTTGAGGGAAGTTCTCCATGAATGTACGTCACAATGATGATGACCGACCAAATCCCTCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415807.7
ENST00000421757.5
ENST00000469491.5
CDS CCA 90 bp CTTGGCAGAGGACAGTCTAGTAGGCCTTCTGTGTCTCCTTTTCTCTaGTTCTCTGGTACGTCAAGTGGCAAGACACAAGAAACGCCATGT +
Preference number: 5 (lower is better)
Translates to: LGRGQSSRPSVSPFL*FSGTSSGKTQETPC
Trigger: ACATGGCGTTTCTTGTGTCTTGCCACTTGACGTACCAGAGAACCAGAGAAAAGGAGACACAGAAGGCCTACTAGACTGTCCTCTGCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478016.1
CDS-3UTR CAA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCTTGAACCGTTGTCAATaGGTGCCTTCCACTGCAGGG +
Preference number: 5 (lower is better)
Translates to: SCARDEFDIQRRVRASEGLNRCQ*VPSTAG
Trigger: CCCTGCAGTGGAAGGCACCAATTGACAACGGTTCAA...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCGATGTAACTGGGCCTTaGACAAGCGGTCTGGTAGGA +
Preference number: 5 (lower is better)
Translates to: SCARDEFDIQRRVRASEGDVTGP*TSGLVG
Trigger: TCCTACCAGACCGCTTGTCAAAGGCCCAGTTACATC...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS TCA 90 bp ACTTCTTTGTGCTTTGGTCTACCCAAAACCCTCGGTGGTCGACATTaGCCTGGTGCAATGCTTAGTGTGCGAACAGGGAGACTTTCAGAA +
Preference number: 5 (lower is better)
Translates to: TSLCFGLPKTLGGRH*PGAMLSVRTGRLSE
Trigger: TTCTGAAAGTCTCCCTGTTCGCACACTAAGCATTGCACCAGGTCAATGTCGACCACCGAGGGTTTTGGGTAGACCAAAGCACAAAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
CDS TCA 90 bp CTAAGACAGTCCAGGTTTTCTCCAATTCCGTATCTGCCCTGGGCTTaGCAACAATGGCTGGCCCAGCATCTCTTTCTTTGTACCAGGAAA +
Preference number: 5 (lower is better)
Translates to: LRQSRFSPIPYLPWA*QQWLAQHLFLCTRK
Trigger: TTTCCTGGTACAAAGAAAGAGATGCTGGGCCAGCCATTGTTGTCAAGCCCAGGGCAGATACGGAATTGGAGAAAACCTGGACTGTCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494000.1
CDS CCA 90 bp GTGTACCCCATTGCCGGACAAAGCTTTGTCAACTTGCAGTGCTTCTaGCTCCCGAAGAAGCACTGTCTGAAACCACTATTTCTTTTTCCC +
Preference number: 5 (lower is better)
Translates to: VYPIAGQSFVNLQCF*LPKKHCLKPLFLFP
Trigger: GGGAAAAAGAAATAGTGGTTTCAGACAGTGCTTCTTCGGGAGCCAGAAGCACTGCAAGTTGACAAAGCTTTGTCCGGCAATGGGGTACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000469491.5
CDS CCA 90 bp TTCCAGAGGGATTTGGTCGGTCATCATCATTGTGACGTACATTCATaGAGAACTTCCCTCAACTGGCTTCCACCATCCAGCCTTAGGAGT +
Preference number: 5 (lower is better)
Translates to: FQRDLVGHHHCDVHS*RTSLNWLPPSSLRS
Trigger: ACTCCTAAGGCTGGATGGTGGAAGCCAGTTGAGGGAAGTTCTCCATGAATGTACGTCACAATGATGATGACCGACCAAATCCCTCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416957.5
CDS CCA 90 bp CTGGTTCTCTGGTACGTCAAGTGGCAAGACACAAGAAACGCCATGTaGTGCCACAAAATGATGGCAAACCTAGCACTACGGTACCCAAAT +
Preference number: 5 (lower is better)
Translates to: LVLWYVKWQDTRNAM*CHKMMANLALRYPN
Trigger: ATTTGGGTACCGTAGTGCTAGGTTTGCCATCATTTTGTGGCACCACATGGCGTTTCTTGTGTCTTGCCACTTGACGTACCAGAGAACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478016.1
CDS CCA 90 bp CTCCAAGAGGAATTCCTTTCAAGATCTGTACTGCTACCTTCACCTTaGTTCTTAGAGACCCCTAGTGGGGCCTTCGCAATACAGCTTGCA +
Preference number: 5 (lower is better)
Translates to: LQEEFLSRSVLLPSP*FLETPSGAFAIQLA
Trigger: TGCAAGCTGTATTGCGAAGGCCCCACTAGGGGTCTCTAAGAACCAAGGTGAAGGTAGCAGTACAGATCTTGAAAGGAATTCCTCTTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494000.1
CDS-3UTR CAA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGAGAAGAAGGAGGGCTGTaGAGGCGGTTCTGGCGATCG +
Preference number: 5 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSREEGGL*RRFWRS
Trigger: CGATCGCCAGAACCGCCTCAACAGCCCTCCTTCTTC...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCCAGCATGCTCGGAGTTaGTACAAAGTGCCTGGTTTC +
Preference number: 5 (lower is better)
Translates to: SCARDEFDIQRRVRASEGQHARS*YKVPGF
Trigger: GAAACCAGGCACTTTGTACAAACTCCGAGCATGCTG...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCTCAGCAGCATGTGTCTaGGAGTTACTGTCTCCCCAT +
Preference number: 5 (lower is better)
Translates to: SCARDEFDIQRRVRASEGSAACV*ELLSPH
Trigger: ATGGGGAGACAGTAACTCCAAGACACATGCTGCTGA...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS TCA 90 bp GATATAACCTGGAGGCACATGAATGGGAGGAATGGATCCATTGGGTaGCATCATGGGAACTTCAGCAGGTCCTTGAATGCACTGAAGTGT +
Preference number: 5 (lower is better)
Translates to: DITWRHMNGRNGSIG*HHGNFSRSLNALKC
Trigger: ACACTTCAGTGCATTCAAGGACCTGCTGAAGTTCCCATGATGTCACCCAATGGATCCATTCCTCCCATTCATGTGCCTCCAGGTTATATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000443501.1
ENST00000469491.5
ENST00000478016.1
CDS GCA 90 bp CTGAATGTGTACCCCATTGCCGGACAAAGCTTTGTCAACTTGCAGTaGTTCTGGCTCCCGAAGAAGCACTGTCTGAAACCACTATTTCTT +
Preference number: 5 (lower is better)
Translates to: LNVYPIAGQSFVNLQ*FWLPKKHCLKPLFL
Trigger: AAGAAATAGTGGTTTCAGACAGTGCTTCTTCGGGAGCCAGAAGCACTGCAAGTTGACAAAGCTTTGTCCGGCAATGGGGTACACATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000469491.5
CDS-3UTR CAA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCCAGTTCCAGAGGGATTaGGTCGGTCATCATCATTGT +
Preference number: 5 (lower is better)
Translates to: SCARDEFDIQRRVRASEGQFQRD*VGHHHC
Trigger: ACAATGATGATGACCGACCAAATCCCTCTGGAACTG...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGATGGCTGAGGGGTAGCTaGGGGGATAACACTCAGGAG +
Preference number: 5 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRWLRGS*GDNTQE
Trigger: CTCCTGAGTGTTATCCCCCAAGCTACCCCTCAGCCA...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATTTGAACCGTTGTCAATaGGTGCCTTCCACTGCAGGG +
Preference number: 5 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNLNRCQ*VPSTAG
Trigger: CCCTGCAGTGGAAGGCACCAATTGACAACGGTTCAA...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATACATGCATGGTGGTGTaGCCCACGGTAATGCTAGTG +
Preference number: 5 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNTCMVV*PTVMLV
Trigger: CACTAGCATTACCGTGGGCAACACCACCATGCATGT...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS TCA 90 bp GGAAAAGGTTATCATTTTCATCCTCCTGAATTTCCAAGGTGTAGGTaGTCACTTCCTCGGGTGAACAGCCTTCTGGCTTACTCCACTGCA +
Preference number: 5 (lower is better)
Translates to: GKGYHFHPPEFPRCR*SLPRVNSLLAYSTA
Trigger: TGCAGTGGAGTAAGCCAGAAGGCTGTTCACCCGAGGAAGTGATCACCTACACCTTGGAAATTCAGGAGGATGAAAATGATAACCTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000469491.5
ENST00000494000.1
CDS-3UTR CAA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGTTTTTGTGCGGAGGCTaGCTGTACTGGTCTTCTCGG +
Preference number: 5 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLFLCGG*LYWSSR
Trigger: CCGAGAAGACCAGTACAGCAAGCCTCCGCACAAAAA...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATCGGTCTTTCAGTTTTTaGTGCGGAGGCTTGCTGTAC +
Preference number: 5 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNRSFSF*CGGLLY
Trigger: GTACAGCAAGCCTCCGCACAAAAAACTGAAAGACCG...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCTCCCGAAAGAATGTCTaGCACCCTCTTTACTTCCAA +
Preference number: 5 (lower is better)
Translates to: SCARDEFDIQRRVRASEGSRKNV*HPLYFQ
Trigger: TTGGAAGTAAAGAGGGTGCAAGACATTCTTTCGGGA...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCGTGATTTTTGAACCGTaGTCAATTGGTGCCTTCCAC +
Preference number: 5 (lower is better)
Translates to: SCARDEFDIQRRVRASEGVIFEP*SIGAFH
Trigger: GTGGAAGGCACCAATTGACAACGGTTCAAAAATCAC...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGGTAGCACACCACCTCTaGGCTATAACCACTGGTACC +
Preference number: 5 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLVAHHL*AITTGT
Trigger: GGTACCAGTGGTTATAGCCAAGAGGTGGTGTGCTAC...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGGATGTAACTGGGCCTTaGACAAGCGGTCTGGTAGGA +
Preference number: 5 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLDVTGP*TSGLVG
Trigger: TCCTACCAGACCGCTTGTCAAAGGCCCAGTTACATC...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATGAAATACAAGGTGCTTaGCATTGTCCAGGAGGCCCT +
Preference number: 5 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNEIQGA*HCPGGP
Trigger: AGGGCCTCCTGGACAATGCAAAGCACCTTGTATTTC...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCACATGCATGGTGGTGTaGCCCACGGTAATGCTAGTG +
Preference number: 5 (lower is better)
Translates to: TISVNHGQWAEALNCHQFTCMVV*PTVMLV
Trigger: CACTAGCATTACCGTGGGCAACACCACCATGCATGT...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGAAACTACCAGGAGGGTTaGATGGGGGATTCCGCCATG +
Preference number: 5 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRNYQEG*MGDSAM
Trigger: CATGGCGGAATCCCCCATCAAACCCTCCTGGTAGTT...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415807.7
CDS-3UTR CAA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTGAAGAAGGAGGGCTGTaGAGGCGGTTCTGGCGATCG +
Preference number: 5 (lower is better)
Translates to: PWRKSGYLASFETWTYVIEEGGL*RRFWRS
Trigger: CGATCGCCAGAACCGCCTCAACAGCCCTCCTTCTTC...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCACTTTGGGCTGCTTCTaGCTCGTCGCTCTGTTTTCT +
Preference number: 5 (lower is better)
Translates to: TISVNHGQWAEALNCHQFTLGCF*LVALFS
Trigger: AGAAAACAGAGCGACGAGCAAGAAGCAGCCCAAAGT...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGCTGAATCATTCGACTTaGGGCTGCTTCTTGCTCGTC +
Preference number: 5 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLLNHST*GCFLLV
Trigger: GACGAGCAAGAAGCAGCCCAAAGTCGAATGATTCAG...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGACAAAGCTTTGTCAACTaGCAGTGCTTCTGGCTCCCG +
Preference number: 5 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRQSFVN*QCFWLP
Trigger: CGGGAGCCAGAAGCACTGCAAGTTGACAAAGCTTTG...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCCCTCTCCAGTGTATTTaGGGTGGAAAAGGTTATCAT +
Preference number: 5 (lower is better)
Translates to: SCARDEFDIQRRVRASEGPLQCI*GGKGYH
Trigger: ATGATAACCTTTTCCACCCAAAATACACTGGAGAGG...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGGGACTTCTTTGTGCTTaGGTCTACCCAAAACCCTCG +
Preference number: 5 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLGLLCA*VYPKPS
Trigger: CGAGGGTTTTGGGTAGACCAAAGCACAAAGAAGTCC...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGCAGGGTCACCTTTCATaGATGGTACCGTCTCCCATA +
Preference number: 5 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLQGHLS*MVPSPI
Trigger: TATGGGAGACGGTACCATCAATGAAAGGTGACCCTG...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCCAGGGTCACCTTTCATaGATGGTACCGTCTCCCATA +
Preference number: 5 (lower is better)
Translates to: TISVNHGQWAEALNCHQFQGHLS*MVPSPI
Trigger: TATGGGAGACGGTACCATCAATGAAAGGTGACCCTG...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATGTGCCAGGGATGAGTTaGACATACAGAGAAGAGTCA +
Preference number: 5 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNVPGMS*TYREES
Trigger: TGACTCTTCTCTGTATGTCAAACTCATCCCTGGCAC...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS CCA 90 bp GCACTGAAGTGTTCCATCCTCTGCTCTTATTGTGAAAGTCTCACCTaGATTAACTTGAACGAGAATAACCTGCTGAGCTGCATCTCCATT +
Preference number: 5 (lower is better)
Translates to: ALKCSILCSYCESLT*INLNENNLLSCISI
Trigger: AATGGAGATGCAGCTCAGCAGGTTATTCTCGTTCAAGTTAATCCAGGTGAGACTTTCACAATAAGAGCAGAGGATGGAACACTTCAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000421757.5
ENST00000423424.5
ENST00000469491.5
CDS-3UTR CAA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGGATCCCTTTACGGAATaGTACATGGCATACACCCTC +
Preference number: 5 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLDPFTE*YMAYTL
Trigger: GAGGGTGTATGCCATGTACAATTCCGTAAAGGGATC...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATAGGGTTAGTGAACTTTaGCTCCTATGTGCCAGCTTA +
Preference number: 5 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNRVSEL*LLCASL
Trigger: TAAGCTGGCACATAGGAGCAAAAGTTCACTAACCCT...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATCAAAGCTTTGTCAACTaGCAGTGCTTCTGGCTCCCG +
Preference number: 5 (lower is better)
Translates to: VGPWRKSGYLASFETWTYQSFVN*QCFWLP
Trigger: CGGGAGCCAGAAGCACTGCAAGTTGACAAAGCTTTG...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGATTTCTGAACCACCATaGTCCTTAGGGGGATCCCAT +
Preference number: 5 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLISEPP*SLGGSH
Trigger: ATGGGATCCCCCTAAGGACAATGGTGGTTCAGAAAT...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGACAGCATGCTCGGAGTTaGTACAAAGTGCCTGGTTTC +
Preference number: 5 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRQHARS*YKVPGF
Trigger: GAAACCAGGCACTTTGTACAAACTCCGAGCATGCTG...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCATTTCAGATCCGTTATaGCACGGCTCTTCCCAGTTC +
Preference number: 5 (lower is better)
Translates to: TISVNHGQWAEALNCHQFISDPL*HGSSQF
Trigger: GAACTGGGAAGAGCCGTGCAATAACGGATCTGAAAT...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATCCCTTGTACACCTGTTaGTACTCAGATTCTCTTCCA +
Preference number: 5 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNPLYTC*YSDSLP
Trigger: TGGAAGAGAATCTGAGTACAAACAGGTGTACAAGGG...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCGTGGCTTCTTCTCCCTaGTACACCTGTTTGTACTCA +
Preference number: 5 (lower is better)
Translates to: TISVNHGQWAEALNCHQFVASSP*YTCLYS
Trigger: TGAGTACAAACAGGTGTACAAGGGAGAAGAAGCCAC...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp TCTTGTGCCAGGGATGAGTTTGACATACAGAGAAGAGTCAGAGCATCAGAAGGCATAATACTACAGATGTaGCCAAGGAACAAGACTGAC +
Preference number: 5 (lower is better)
Translates to: SCARDEFDIQRRVRASEGIILQM*PRNKTD
Trigger: GTCAGTCTTGTTCCTTGGCAACATCTGTAGTATTAT...GCCTTCTGATGCTCTGACTCTTCTCTGTATGTCAAACTCATCCCTGGCACAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATCAGATCGAGACCATCTaGGCCAACATGGTGAAACCC +
Preference number: 5 (lower is better)
Translates to: VGPWRKSGYLASFETWTYQIETI*ANMVKP
Trigger: GGGTTTCACCATGTTGGCCAAGATGGTCTCGATCTG...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AAAAGAAGTCAACCCAGTGTTTCCACTTTCCATGAAGGACTTCTCAAGGGCAAGCTTCACCACTTCATCTaGAATGCACTGAAGTGTTCC +
Preference number: 5 (lower is better)
Translates to: KRSQPSVSTFHEGLLKGKLHHFI*NALKCS
Trigger: GGAACACTTCAGTGCATTCAAGATGAAGTGGTGAAG...CTTGCCCTTGAGAAGTCCTTCATGGAAAGTGGAAACACTGGGTTGACTTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421757.5
CDS TCA 90 bp ACAGTGTCCATAGTGAGTAGAGAAGTCCATCAAATGGATTACCTGTaGGATATAACCTGGAGGCACATGAATGGGAGGAATGGATCCATT +
Preference number: 5 (lower is better)
Translates to: TVSIVSREVHQMDYL*DITWRHMNGRNGSI
Trigger: AATGGATCCATTCCTCCCATTCATGTGCCTCCAGGTTATATCTCACAGGTAATCCATTTGATGGACTTCTCTACTCACTATGGACACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478016.1
CDS TCA 90 bp TGTAGCACACCACCTCTTGGCTATAACCACTGTAGAGAAAGAAAGTaGGGCACACAGTTAGAAGCATGTGAAGAGGCTTGGCATTTTAAA +
Preference number: 5 (lower is better)
Translates to: CSTPPLGYNHCRERK*GTQLEACEEAWHFK
Trigger: TTTAAAATGCCAAGCCTCTTCACATGCTTCTAACTGTGTGCCTCACTTTCTTTCTCTACAGTGGTTATAGCCAAGAGGTGGTGTGCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494000.1
CDS CCA 90 bp CAGAATTTCTTACGGAGTGAGTATCATGCTCTTGCTCTTATCTGTTaGTCTTGTCCTGACCTATGGTTAGCATTAACAGGGGACAGTCAT +
Preference number: 5 (lower is better)
Translates to: QNFLRSEYHALALIC*SCPDLWLALTGDSH
Trigger: ATGACTGTCCCCTGTTAATGCTAACCATAGGTCAGGACAAGACCAACAGATAAGAGCAAGAGCATGATACTCACTCCGTAAGAAATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483344.1
CDS-3UTR CAA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATCGGTCTTTCAGTTTTTaGTGCGGAGGCTTGCTGTAC +
Preference number: 5 (lower is better)
Translates to: VGPWRKSGYLASFETWTYRSFSF*CGGLLY
Trigger: GTACAGCAAGCCTCCGCACAAAAAACTGAAAGACCG...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATACTTTGGGCTGCTTCTaGCTCGTCGCTCTGTTTTCT +
Preference number: 5 (lower is better)
Translates to: VGPWRKSGYLASFETWTYTLGCF*LVALFS
Trigger: AGAAAACAGAGCGACGAGCAAGAAGCAGCCCAAAGT...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATTTTCCATCTCGTCCTTaGTCTGATAAGGCCACCTCG +
Preference number: 5 (lower is better)
Translates to: VGPWRKSGYLASFETWTYFPSRP*SDKATS
Trigger: CGAGGTGGCCTTATCAGACAAAGGACGAGATGGAAA...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGGTGATTTTTGAACCGTaGTCAATTGGTGCCTTCCAC +
Preference number: 5 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLVIFEP*SIGAFH
Trigger: GTGGAAGGCACCAATTGACAACGGTTCAAAAATCAC...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCAAACAAGAACTTCGCTaGGACAGCTTTTTCCTTCCG +
Preference number: 5 (lower is better)
Translates to: TISVNHGQWAEALNCHQFKQELR*DSFFLP
Trigger: CGGAAGGAAAAAGCTGTCCAAGCGAAGTTCTTGTTT...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCATCATGCTCTTCATTTaGGGATCATCTAAGCTCCCC +
Preference number: 5 (lower is better)
Translates to: TISVNHGQWAEALNCHQFIMLFI*GSSKLP
Trigger: GGGGAGCTTAGATGATCCCAAAATGAAGAGCATGAT...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGAGTGCCAGGGATGAGTTaGACATACAGAGAAGAGTCA +
Preference number: 5 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRVPGMS*TYREES
Trigger: TGACTCTTCTCTGTATGTCAAACTCATCCCTGGCAC...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGAGGACAAAGGGCAGTTaGCTTCACATGACTGGAATT +
Preference number: 5 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLRTKGS*LHMTGI
Trigger: AATTCCAGTCATGTGAAGCAAACTGCCCTTTGTCCT...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS TCA 90 bp AAACCTAGCACTACGGTACCCAAATTAACTCCTGGAATATGGCTTTaGAGCCTCAACATATATTCTGTTGGAGCAACGACAGTGTCCATA +
Preference number: 5 (lower is better)
Translates to: KPSTTVPKLTPGIWL*SLNIYSVGATTVSI
Trigger: TATGGACACTGTCGTTGCTCCAACAGAATATATGTTGAGGCTTCAAAGCCATATTCCAGGAGTTAATTTGGGTACCGTAGTGCTAGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478016.1
CDS TCA 90 bp CAAGTGCAACTGAAACATGGCCTTTTCAAAGCCTCTTTAATCAATTaGTACCTTACAGTACACCCGTTCTCGCCTTTCTCATACAGCCTA +
Preference number: 5 (lower is better)
Translates to: QVQLKHGLFKASLIN*YLTVHPFSPFSYSL
Trigger: TAGGCTGTATGAGAAAGGCGAGAACGGGTGTACTGTAAGGTATCAATTGATTAAAGAGGCTTTGAAAAGGCCATGTTTCAGTTGCACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494000.1
CDS GCA 90 bp GTATATGTTTATTTGTTTAACTCTTTCTTCATTGTCAGTTCTGTTTaGTGCTGTCTTCTCAGCACCCAGAACCAAGCCTGGCATGGTGAG +
Preference number: 5 (lower is better)
Translates to: VYVYLFNSFFIVSSV*CCLLSTQNQAWHGE
Trigger: CTCACCATGCCAGGCTTGGTTCTGGGTGCTGAGAAGACAGCAGCAAACAGAACTGACAATGAAGAAAGAGTTAAACAAATAAACATATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476794.1
CDS-3UTR CAA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATCAGTTCCAGAGGGATTaGGTCGGTCATCATCATTGT +
Preference number: 5 (lower is better)
Translates to: VGPWRKSGYLASFETWTYQFQRD*VGHHHC
Trigger: ACAATGATGATGACCGACCAAATCCCTCTGGAACTG...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATAACTTCAGCAGGTCCTaGAATGCACTGAAGTGTTCC +
Preference number: 5 (lower is better)
Translates to: VGPWRKSGYLASFETWTYNFSRS*NALKCS
Trigger: GGAACACTTCAGTGCATTCAAGGACCTGCTGAAGTT...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTTTTTTGTGCGGAGGCTaGCTGTACTGGTCTTCTCGG +
Preference number: 5 (lower is better)
Translates to: PWRKSGYLASFETWTYVIFLCGG*LYWSSR
Trigger: CCGAGAAGACCAGTACAGCAAGCCTCCGCACAAAAA...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGAAGGGTTAGTGAACTTTaGCTCCTATGTGCCAGCTTA +
Preference number: 5 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRRVSEL*LLCASL
Trigger: TAAGCTGGCACATAGGAGCAAAAGTTCACTAACCCT...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCCCTCTCCAGTGTATTTaGGGTGGAAAAGGTTATCAT +
Preference number: 5 (lower is better)
Translates to: TISVNHGQWAEALNCHQFPLQCI*GGKGYH
Trigger: ATGATAACCTTTTCCACCCAAAATACACTGGAGAGG...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGAAAACAAGAACTTCGCTaGGACAGCTTTTTCCTTCCG +
Preference number: 5 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRKQELR*DSFFLP
Trigger: CGGAAGGAAAAAGCTGTCCAAGCGAAGTTCTTGTTT...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCTCTAAGTGGACTTCTTaGTGCTTTGGTCTACCCAAA +
Preference number: 5 (lower is better)
Translates to: TISVNHGQWAEALNCHQFSKWTS*CFGLPK
Trigger: TTTGGGTAGACCAAAGCACAAAGAAGTCCACTTAGA...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGTCTAAGTGGACTTCTTaGTGCTTTGGTCTACCCAAA +
Preference number: 5 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLSKWTS*CFGLPK
Trigger: TTTGGGTAGACCAAAGCACAAAGAAGTCCACTTAGA...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGACGTAAGAGTAACACTTaGCACTCCAATAGCACCTGT +
Preference number: 5 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRRKSNT*HSNSTC
Trigger: ACAGGTGCTATTGGAGTGCAAAGTGTTACTCTTACG...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGACTGTTGTTGTTGTTGTaGTTGAATGAGACCTGCAGG +
Preference number: 5 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRLLLLL*LNETCR
Trigger: CCTGCAGGTCTCATTCAACAACAACAACAACAACAG...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS TCA 90 bp TTTGTGCGGAGGCTTGCTGTACTGGTCTTCTCGGGTGATGTAGGTTaGCATTCCATAAAATGGTATAATTTCTTGCTCACCATATATTGT +
Preference number: 5 (lower is better)
Translates to: FVRRLAVLVFSGDVG*HSIKWYNFLLTIYC
Trigger: ACAATATATGGTGAGCAAGAAATTATACCATTTTATGGAATGTCAACCTACATCACCCGAGAAGACCAGTACAGCAAGCCTCCGCACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000443501.1
ENST00000469491.5
CDS-3UTR CAA 90 bp CGAAGTGCTCGTAATGAAGAAATATCTATGACACAGATCATGAAACATGAGAGACAGTTCCAGAGGGATTaGGTCGGTCATCATCATTGT +
Preference number: 5 (lower is better)
Translates to: RSARNEEISMTQIMKHERQFQRD*VGHHHC
Trigger: ACAATGATGATGACCGACCAAATCCCTCTGGAACTG...TCTCTCATGTTTCATGATCTGTGTCATAGATATTTCTTCATTACGAGCACTTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421757.5
ENST00000423424.5
CDS-3UTR CAA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATCTCACCTGGATTAACTaGAACGAGAATAACCTGCTG +
Preference number: 5 (lower is better)
Translates to: VGPWRKSGYLASFETWTYLTWIN*NENNLL
Trigger: CAGCAGGTTATTCTCGTTCAAGTTAATCCAGGTGAG...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGAAGCCATTGTATACTGTaGTGCAGCTGCTTTTGTAGA +
Preference number: 5 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRSHCIL*CSCFCR
Trigger: TCTACAAAAGCAGCTGCACAACAGTATACAATGGCT...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGAATCTCTAGCAAGTACTaGAGGATTTCTGAACCACCA +
Preference number: 5 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRISSKY*RISEPP
Trigger: TGGTGGTTCAGAAATCCTCAAGTACTTGCTAGAGAT...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTTCAGCAGCATGTGTCTaGGAGTTACTGTCTCCCCAT +
Preference number: 5 (lower is better)
Translates to: PWRKSGYLASFETWTYVISAACV*ELLSPH
Trigger: ATGGGGAGACAGTAACTCCAAGACACATGCTGCTGA...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGATTCTGTATGTTGCTGTaGCTGTGTGGTAATACTCTG +
Preference number: 5 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRFCMLL*LCGNTL
Trigger: CAGAGTATTACCACACAGCAACAGCAACATACAGAA...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCCATATCTTCTGTATGTaGCTGTTGCTGTGTGGTAAT +
Preference number: 5 (lower is better)
Translates to: TISVNHGQWAEALNCHQFHIFCM*LLLCGN
Trigger: ATTACCACACAGCAACAGCAACATACAGAAGATATG...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGAGTGCATTCTGGTTACTaGATTTCTTATACAGGCAGC +
Preference number: 5 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRVHSGY*ISYTGS
Trigger: GCTGCCTGTATAAGAAATCAAGTAACCAGAATGCAC...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATAACTGTCACCAGTTCTaGTCATATAATTCTGGTCAA +
Preference number: 5 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNNCHQF*SYNSGQ
Trigger: TTGACCAGAATTATATGACAAGAACTGGTGACAGTT...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGGATACACTGTGTCTGTaGCACCCTTTTGGAATATAT +
Preference number: 5 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLDTLCL*HPFGIY
Trigger: ATATATTCCAAAAGGGTGCAACAGACACAGTGTATC...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AGAAGGCCACCTGCCTGGCCTCCAAAAACACGTGAATTTTCAACTAATCTGAATTGTTTCCCCATGACTTaGGTATGGGAATATTATAAG +
Preference number: 5 (lower is better)
Translates to: RRPPAWPPKTREFSTNLNCFPMT*VWEYYK
Trigger: CTTATAATATTCCCATACCAAAGTCATGGGGAAACA...ATTCAGATTAGTTGAAAATTCACGTGTTTTTGGAGGCCAGGCAGGTGGCCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGTGCCAACATTTCAAGTaGATAAGAACAAGGCAGAGA +
Preference number: 5 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLCQHFK*IRTRQR
Trigger: TCTCTGCCTTGTTCTTATCAACTTGAAATGTTGGCA...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCCTAGAGTTGAAAAGCTaGGAATGTATGTCCAACAGT +
Preference number: 5 (lower is better)
Translates to: TISVNHGQWAEALNCHQFLELKS*ECMSNS
Trigger: ACTGTTGGACATACATTCCAAGCTTTTCAACTCTAG...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AAACAGAAGCAGGGGGATACACTGTGTCTGTTGCACCCTTTTGGAATATATTTGTTGTTGTTGTTGTTGTaGAATGAGACCTGCAGGAAA +
Preference number: 5 (lower is better)
Translates to: KQKQGDTLCLLHPFGIYLLLLLL*NETCRK
Trigger: TTTCCTGCAGGTCTCATTCAACAACAACAACAACAA...CAAATATATTCCAAAAGGGTGCAACAGACACAGTGTATCCCCCTGCTTCTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp GGTTCTACAAACACTTTTGGACAGTCTAACATACATATAAGCTGTCCCTTTCAAAATCCACTTCAGACATaGAAAAGCCACACCGCGAAG +
Preference number: 5 (lower is better)
Translates to: GSTNTFGQSNIHISCPFQNPLQT*KSHTAK
Trigger: CTTCGCGGTGTGGCTTTTCAATGTCTGAAGTGGATT...TTGAAAGGGACAGCTTATATGTATGTTAGACTGTCCAAAAGTGTTTGTAGAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000421757.5
CDS-3UTR CAA 90 bp AGTGCTCGTAATGAAGAAATATCTATGACACAGATCATGAAACATGAGAGAGAACAGTTCCAGAGGGATTaGGTCGGTCATCATCATTGT +
Preference number: 5 (lower is better)
Translates to: SARNEEISMTQIMKHEREQFQRD*VGHHHC
Trigger: ACAATGATGATGACCGACCAAATCCCTCTGGAACTG...TTCTCTCTCATGTTTCATGATCTGTGTCATAGATATTTCTTCATTACGAGCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421757.5
ENST00000423424.5
CDS-3UTR CAA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCTACTGTGTGCTTCTTTaGAGATTTTTCACAGTACAG +
Preference number: 5 (lower is better)
Translates to: TISVNHGQWAEALNCHQFYCVLL*RFFTVQ
Trigger: CTGTACTGTGAAAAATCTCAAAAGAAGCACACAGTA...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTGTGGCTTCTTCTCCCTaGTACACCTGTTTGTACTCA +
Preference number: 5 (lower is better)
Translates to: PWRKSGYLASFETWTYVIVASSP*YTCLYS
Trigger: TGAGTACAAACAGGTGTACAAGGGAGAAGAAGCCAC...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCTGTTTCCCCATGACTTaGGTATGGGAATATTATAAG +
Preference number: 5 (lower is better)
Translates to: TISVNHGQWAEALNCHQFCFPMT*VWEYYK
Trigger: CTTATAATATTCCCATACCAAAGTCATGGGGAAACA...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGATGCCAACATTTCAAGTaGATAAGAACAAGGCAGAGA +
Preference number: 5 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRCQHFK*IRTRQR
Trigger: TCTCTGCCTTGTTCTTATCAACTTGAAATGTTGGCA...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AGCCCTGTAAGTACACACACGGTGATTCATGTTTACAGATACAGATGTTCAAGATTGTTGTTGTTGTTGTaGAATGAGACCTGCAGGAAA +
Preference number: 5 (lower is better)
Translates to: SPVSTHTVIHVYRYRCSRLLLLL*NETCRK
Trigger: TTTCCTGCAGGTCTCATTCAACAACAACAACAACAA...TCTTGAACATCTGTATCTGTAAACATGAATCACCGTGTGTGTACTTACAGGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp ACAATTAGTGTAAATCATGGACAATGGGCAGAGGCACTAAACTGTCACCAGTTCTTATTGCTGTTGTTGTaGTTGTTGTTGAATGAGACC +
Preference number: 5 (lower is better)
Translates to: TISVNHGQWAEALNCHQFLLLLL*LLLNET
Trigger: GGTCTCATTCAACAACAACAACAACAACAGCAATAA...GAACTGGTGACAGTTTAGTGCCTCTGCCCATTGTCCATGATTTACACTAATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTCTTGCTCACCATATATaGTGTGGGGAAGATGATGCT +
Preference number: 5 (lower is better)
Translates to: PWRKSGYLASFETWTYVILAHHI*CGEDDA
Trigger: AGCATCATCTTCCCCACACAATATATGGTGAGCAAG...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTCCCTTGTACACCTGTTaGTACTCAGATTCTCTTCCA +
Preference number: 5 (lower is better)
Translates to: PWRKSGYLASFETWTYVIPLYTC*YSDSLP
Trigger: TGGAAGAGAATCTGAGTACAAACAGGTGTACAAGGG...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTCGTAAGAGTAACACTTaGCACTCCAATAGCACCTGT +
Preference number: 5 (lower is better)
Translates to: PWRKSGYLASFETWTYVIRKSNT*HSNSTC
Trigger: ACAGGTGCTATTGGAGTGCAAAGTGTTACTCTTACG...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTGTCTGTTGCACCCTTTaGGAATATATTTGCACCTCC +
Preference number: 5 (lower is better)
Translates to: PWRKSGYLASFETWTYVIVCCTL*EYICTS
Trigger: GGAGGTGCAAATATATTCCAAAAGGGTGCAACAGAC...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp GTTGGCCCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGATACACTGTGTCTGTaGCACCCTTTTGGAATATAT +
Preference number: 5 (lower is better)
Translates to: VGPWRKSGYLASFETWTYDTLCL*HPFGIY
Trigger: ATATATTCCAAAAGGGTGCAACAGACACAGTGTATC...ATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGGGCCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTCTGTTGTTGTTGTTGTaGTTGAATGAGACCTGCAGG +
Preference number: 5 (lower is better)
Translates to: PWRKSGYLASFETWTYVILLLLL*LNETCR
Trigger: CCTGCAGGTCTCATTCAACAACAACAACAACAACAG...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp AGTGCTCGTAATGAAGAAATATCTATGACACAGATCATGAAACATGAGAGAGAACTTCACCACTTCATCTaGAATGCACTGAAGTGTTCC +
Preference number: 5 (lower is better)
Translates to: SARNEEISMTQIMKHERELHHFI*NALKCS
Trigger: GGAACACTTCAGTGCATTCAAGATGAAGTGGTGAAG...TTCTCTCTCATGTTTCATGATCTGTGTCATAGATATTTCTTCATTACGAGCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421757.5
ENST00000423424.5
CDS-3UTR CAA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTATCTCTAGCAAGTACTaGAGGATTTCTGAACCACCA +
Preference number: 5 (lower is better)
Translates to: PWRKSGYLASFETWTYVIISSKY*RISEPP
Trigger: TGGTGGTTCAGAAATCCTCAAGTACTTGCTAGAGAT...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTGTGCATTCTGGTTACTaGATTTCTTATACAGGCAGC +
Preference number: 5 (lower is better)
Translates to: PWRKSGYLASFETWTYVIVHSGY*ISYTGS
Trigger: GCTGCCTGTATAAGAAATCAAGTAACCAGAATGCAC...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTAATTCAATCACTTCATaGATACCTCAAAGAACAGCC +
Preference number: 5 (lower is better)
Translates to: PWRKSGYLASFETWTYVINSITS*IPQRTA
Trigger: GGCTGTTCTTTGAGGTATCAATGAAGTGATTGAATT...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS-3UTR CAA 90 bp CCATGGAGGAAATCTGGATATTTAGCTTCTTTTGAAACATGGACATATGTGATTTTATTGCTGTTGTTGTaGTTGTTGTTGAATGAGACC +
Preference number: 5 (lower is better)
Translates to: PWRKSGYLASFETWTYVILLLLL*LLLNET
Trigger: GGTCTCATTCAACAACAACAACAACAACAGCAATAA...AATCACATATGTCCATGTTTCAAAAGAAGCTAAATATCCAGATTTCCTCCATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000415807.7
CDS CCA 72 bp TCCAGGAAGCAGGTTGCCGACGGTGCACTCCAGCTCTaGGCCATGGTACACTTCCGAGGCTACGTCTTCGGG +
Preference number: 6 (lower is better)
Translates to: SRKQVADGALQL*AMVHFRGYVFG
Trigger: CCCGAAGACGTAGCCTCGGAAGTGTACCATGGCCCAGAGCTGGAGTGCACCGTCGGCAACCTGCTTCCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
CDS CCA 72 bp GACACAGAGAGTGGAGACGGGGTCAGGGGCAGACGCTaGCGTCTGGCAAAGGACAAGTTCACTGTACGGCCC +
Preference number: 6 (lower is better)
Translates to: DTESGDGVRGRR*RLAKDKFTVRP
Trigger: GGGCCGTACAGTGAACTTGTCCTTTGCCAGACGCCAGCGTCTGCCCCTGACCCCGTCTCCACTCTCTGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
CDS CAA 72 bp CTCACCCGGAAGCGATACACGGTTCCAGGAAGCAGGTaGCCGACGGTGCACTCCAGCTCTGGGCCATGGTAC +
Preference number: 6 (lower is better)
Translates to: LTRKRYTVPGSR*PTVHSSSGPWY
Trigger: GTACCATGGCCCAGAGCTGGAGTGCACCGTCGGCAACCTGCTTCCTGGAACCGTGTATCGCTTCCGGGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
CDS CAA 90 bp TTCAGAGCCCTCACCCGGAAGCGATACACGGTTCCAGGAAGCAGGTaGCCGACGGTGCACTCCAGCTCTGGGCCATGGTACACTTCCGAG +
Preference number: 6 (lower is better)
Translates to: FRALTRKRYTVPGSR*PTVHSSSGPWYTSE
Trigger: CTCGGAAGTGTACCATGGCCCAGAGCTGGAGTGCACCGTCGGCAACCTGCTTCCTGGAACCGTGTATCGCTTCCGGGTGAGGGCTCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
CDS GCA 72 bp AGCGATACACGGTTCCAGGAAGCAGGTTGCCGACGGTaGACTCCAGCTCTGGGCCATGGTACACTTCCGAGG +
Preference number: 6 (lower is better)
Translates to: SDTRFQEAGCRR*TPALGHGTLPR
Trigger: CCTCGGAAGTGTACCATGGCCCAGAGCTGGAGTGCACCGTCGGCAACCTGCTTCCTGGAACCGTGTATCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
CDS GCA 72 bp TCACCCGGAAGCGATACACGGTTCCAGGAAGCAGGTTaGCGACGGTGCACTCCAGCTCTGGGCCATGGTACA +
Preference number: 6 (lower is better)
Translates to: SPGSDTRFQEAG*RRCTPALGHGT
Trigger: TGTACCATGGCCCAGAGCTGGAGTGCACCGTCGGCAACCTGCTTCCTGGAACCGTGTATCGCTTCCGGGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
CDS TCA 72 bp AAAGCCGCAGAGGGGCTGAAGGCTCCGCTTAGCTCCTaGGAGGTGTCTAAACAGCGACGACACGCACATACG +
Preference number: 6 (lower is better)
Translates to: KAAEGLKAPLSS*EVSKQRRHAHT
Trigger: CGTATGTGCGTGTCGTCGCTGTTTAGACACCTCTCAGGAGCTAAGCGGAGCCTTCAGCCCCTCTGCGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
CDS TCA 72 bp GGTAGCTTGGGGGATAACACTCAGGAGACTGGGGTGTaGCCACCACCCGGCGGACTCCAGTACTATCTTCAA +
Preference number: 6 (lower is better)
Translates to: GSLGDNTQETGV*PPPGGLQYYLQ
Trigger: TTGAAGATAGTACTGGAGTCCGCCGGGTGGTGGTCACACCCCAGTCTCCTGAGTGTTATCCCCCAAGCTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000443501.1
ENST00000469491.5
CDS GCA 72 bp ACTTCCTCGGGTGAACAGCCTTCTGGCTTACTCCACTaGAACGTGACCCATGTGATGCCAGCTCGAACCAGC +
Preference number: 6 (lower is better)
Translates to: TSSGEQPSGLLH*NVTHVMPARTS
Trigger: GCTGGTTCGAGCTGGCATCACATGGGTCACGTTGCAGTGGAGTAAGCCAGAAGGCTGTTCACCCGAGGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000469491.5
ENST00000494000.1
CDS TCA 72 bp TACGTCTTCGGGCTCCGTCATCTCCACGCTGTACTCTaGGACCTCACAGCCACTTTCCGATGCAGGAACATC +
Preference number: 6 (lower is better)
Translates to: YVFGLRHLHAVL*DLTATFRCRNI
Trigger: GATGTTCCTGCATCGGAAAGTGGCTGTGAGGTCTCAGAGTACAGCGTGGAGATGACGGAGCCCGAAGACGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
CDS TCA 72 bp GGGGACACTTTTGGTTGTGCTGAAGGTATAGGTTTCTaGGAAGGGCCCTTCTCCAGCCTCGCTTGCTGCCTG +
Preference number: 6 (lower is better)
Translates to: GDTFGCAEGIGF*EGPFSSLACCL
Trigger: CAGGCAGCAAGCGAGGCTGGAGAAGGGCCCTTCTCAGAAACCTATACCTTCAGCACAACCAAAAGTGTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
CDS CCA 72 bp GCTGAGCTGCATCTCCATTCACCAAGTGGGGCATCATaGCTACCTCTCCGTTCAGCAATGGTGGCAGTTCCA +
Preference number: 6 (lower is better)
Translates to: AELHLHSPSGAS*LPLRSAMVAVP
Trigger: TGGAACTGCCACCATTGCTGAACGGAGAGGTAGCCATGATGCCCCACTTGGTGAATGGAGATGCAGCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000421757.5
ENST00000423424.5
ENST00000469491.5
CDS CCA 72 bp GAGTCAGATAGGGAGGGAGATGATGGGTTGGAGACATaGCTGAGGGGTAGCTTGGGGGATAACACTCAGGAG +
Preference number: 6 (lower is better)
Translates to: ESDREGDDGLET*LRGSLGDNTQE
Trigger: CTCCTGAGTGTTATCCCCCAAGCTACCCCTCAGCCATGTCTCCAACCCATCATCTCCCTCCCTATCTGACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000443501.1
ENST00000469491.5
CDS CAA 72 bp CGGTTCTGGCGATCGATCTGGCGGTCTTTCAGTTTTTaGTGCGGAGGCTTGCTGTACTGGTCTTCTCGGGTG +
Preference number: 6 (lower is better)
Translates to: RFWRSIWRSFSF*CGGLLYWSSRV
Trigger: CACCCGAGAAGACCAGTACAGCAAGCCTCCGCACAAAAAACTGAAAGACCGCCAGATCGATCGCCAGAACCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000443501.1
ENST00000469491.5
CDS TCA 72 bp GGAGACTTTCAGAACACTGGCTGTGTCCGCCGGTACTaGTGCAGCATGCTCGGAGTTTGTACAAAGTGCCTG +
Preference number: 6 (lower is better)
Translates to: GDFQNTGCVRRY*CSMLGVCTKCL
Trigger: CAGGCACTTTGTACAAACTCCGAGCATGCTGCATCAGTACCGGCGGACACAGCCAGTGTTCTGAAAGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
CDS GCA 72 bp GTCGTTTCGAGCGGCCAGCCTGAATGTGTACCCCATTaGCGGACAAAGCTTTGTCAACTTGCAGTGCTTCTG +
Preference number: 6 (lower is better)
Translates to: VVSSGQPECVPH*RTKLCQLAVLL
Trigger: CAGAAGCACTGCAAGTTGACAAAGCTTTGTCCGGCAATGGGGTACACATTCAGGCTGGCCGCTCGAAACGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000469491.5
CDS CCA 72 bp GTGGGGCATCATGGCTACCTCTCCGTTCAGCAATGGTaGCAGTTCCAGAGGGATTTGGTCGGTCATCATCAT +
Preference number: 6 (lower is better)
Translates to: VGHHGYLSVQQW*QFQRDLVGHHH
Trigger: ATGATGATGACCGACCAAATCCCTCTGGAACTGCCACCATTGCTGAACGGAGAGGTAGCCATGATGCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000421757.5
ENST00000423424.5
ENST00000469491.5
CDS CCA 72 bp CAAGTGGGGCATCATGGCTACCTCTCCGTTCAGCAATaGTGGCAGTTCCAGAGGGATTTGGTCGGTCATCAT +
Preference number: 6 (lower is better)
Translates to: QVGHHGYLSVQQ*WQFQRDLVGHH
Trigger: ATGATGACCGACCAAATCCCTCTGGAACTGCCACCATTGCTGAACGGAGAGGTAGCCATGATGCCCCACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000421757.5
ENST00000423424.5
ENST00000469491.5
CDS CAA 72 bp CTGTGTCCGCCGGTACTGATGCAGCATGCTCGGAGTTaGTACAAAGTGCCTGGTTTCAAGTGGGTGAAGGTG +
Preference number: 6 (lower is better)
Translates to: LCPPVLMQHARS*YKVPGFKWVKV
Trigger: CACCTTCACCCACTTGAAACCAGGCACTTTGTACAAACTCCGAGCATGCTGCATCAGTACCGGCGGACACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
CDS TCA 72 bp AACCACTGGTACCAATGTCGTTTCGAGCGGCCAGCCTaGATGTGTACCCCATTGCCGGACAAAGCTTTGTCA +
Preference number: 6 (lower is better)
Translates to: NHWYQCRFERPA*MCTPLPDKALS
Trigger: TGACAAAGCTTTGTCCGGCAATGGGGTACACATTCAGGCTGGCCGCTCGAAACGACATTGGTACCAGTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000469491.5
CDS TCA 72 bp TGCTTTGGTCTACCCAAAACCCTCGGTGGTCGACATTaGCCTGGTGCAATGCTTAGTGTGCGAACAGGGAGA +
Preference number: 6 (lower is better)
Translates to: CFGLPKTLGGRH*PGAMLSVRTGR
Trigger: TCTCCCTGTTCGCACACTAAGCATTGCACCAGGTCAATGTCGACCACCGAGGGTTTTGGGTAGACCAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
CDS TCA 72 bp CCTCACTTCGTTGTAATACAAAAGCCGCAGAGGGGCTaGAGGCTCCGCTTAGCTCCTGAGAGGTGTCTAAAC +
Preference number: 6 (lower is better)
Translates to: PHFVVIQKPQRG*RLRLAPERCLN
Trigger: GTTTAGACACCTCTCAGGAGCTAAGCGGAGCCTTCAGCCCCTCTGCGGCTTTTGTATTACAACGAAGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
CDS TCA 72 bp CTTCTGTGGCAGAAGAGTCACTTAAGCCCAGGAGTTTaGGACTGCAATGGGCCATGTTTGTGCCACTGCCCT +
Preference number: 6 (lower is better)
Translates to: LLWQKSHLSPGV*DCNGPCLCHCP
Trigger: AGGGCAGTGGCACAAACATGGCCCATTGCAGTCTCAAACTCCTGGGCTTAAGTGACTCTTCTGCCACAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469491.5
CDS GCA 72 bp AGAACACTGGCTGTGTCCGCCGGTACTGATGCAGCATaGTCGGAGTTTGTACAAAGTGCCTGGTTTCAAGTG +
Preference number: 6 (lower is better)
Translates to: RTLAVSAGTDAA*SEFVQSAWFQV
Trigger: CACTTGAAACCAGGCACTTTGTACAAACTCCGAGCATGCTGCATCAGTACCGGCGGACACAGCCAGTGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
CDS CCA 72 bp GGGATCCCATTTGACACTAAAGCCATGAGATGTAACTaGGCCTTTGACAAGCGGTCTGGTAGGAGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: GIPFDTKAMRCN*AFDKRSGRRSR
Trigger: CCTGGACCTCCTACCAGACCGCTTGTCAAAGGCCCAGTTACATCTCATGGCTTTAGTGTCAAATGGGATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000469491.5
CDS CAA 72 bp TCTTCTGTGGCAGAAGAGTCACTTAAGCCCAGGAGTTaGAGACTGCAATGGGCCATGTTTGTGCCACTGCCC +
Preference number: 6 (lower is better)
Translates to: SSVAEESLKPRS*RLQWAMFVPLP
Trigger: GGGCAGTGGCACAAACATGGCCCATTGCAGTCTCAAACTCCTGGGCTTAAGTGACTCTTCTGCCACAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469491.5
CDS CAA 90 bp GCCAGCCTGAATGTGTACCCCATTGCCGGACAAAGCTTTGTCAACTaGCAGTGCTTCTGGCTCCCGAAGAAGCACTGTCTGAAACCACTA +
Preference number: 6 (lower is better)
Translates to: ASLNVYPIAGQSFVN*QCFWLPKKHCLKPL
Trigger: TAGTGGTTTCAGACAGTGCTTCTTCGGGAGCCAGAAGCACTGCAAGTTGACAAAGCTTTGTCCGGCAATGGGGTACACATTCAGGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000469491.5
CDS CAA 90 bp GAACACTGGCTGTGTCCGCCGGTACTGATGCAGCATGCTCGGAGTTaGTACAAAGTGCCTGGTTTCAAGTGGGTGAAGGTGTATTCGGTA +
Preference number: 6 (lower is better)
Translates to: EHWLCPPVLMQHARS*YKVPGFKWVKVYSV
Trigger: TACCGAATACACCTTCACCCACTTGAAACCAGGCACTTTGTACAAACTCCGAGCATGCTGCATCAGTACCGGCGGACACAGCCAGTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
CDS TCA 72 bp CTGAATTTCCAAGGTGTAGGTGATCACTTCCTCGGGTaGACAGCCTTCTGGCTTACTCCACTGCAACGTGAC +
Preference number: 6 (lower is better)
Translates to: LNFQGVGDHFLG*TAFWLTPLQRD
Trigger: GTCACGTTGCAGTGGAGTAAGCCAGAAGGCTGTTCACCCGAGGAAGTGATCACCTACACCTTGGAAATTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000469491.5
ENST00000494000.1
CDS TCA 72 bp TACGCGGAACCTGTAGTCTGTGTTGGTCTGGAGGCCTaGGATTTGGAATGTGGCTTCTTCTCCCTTGTACAC +
Preference number: 6 (lower is better)
Translates to: YAEPVVCVGLEA*DLECGFFSLVH
Trigger: GTGTACAAGGGAGAAGAAGCCACATTCCAAATCTCAGGCCTCCAGACCAACACAGACTACAGGTTCCGCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
CDS GCA 72 bp TACCCCATTGCCGGACAAAGCTTTGTCAACTTGCAGTaGTTCTGGCTCCCGAAGAAGCACTGTCTGAAACCA +
Preference number: 6 (lower is better)
Translates to: YPIAGQSFVNLQ*FWLPKKHCLKP
Trigger: TGGTTTCAGACAGTGCTTCTTCGGGAGCCAGAAGCACTGCAAGTTGACAAAGCTTTGTCCGGCAATGGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000469491.5
CDS GCA 72 bp CCAAAACCCTCGGTGGTCGACATTGACCTGGTGCAATaGTTAGTGTGCGAACAGGGAGACTTTCAGAACACT +
Preference number: 6 (lower is better)
Translates to: PKPSVVDIDLVQ*LVCEQGDFQNT
Trigger: AGTGTTCTGAAAGTCTCCCTGTTCGCACACTAAGCATTGCACCAGGTCAATGTCGACCACCGAGGGTTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
CDS CCA 72 bp GATTTGGTCGGTCATCATCATTGTGACGTACATTCATaGAGAACTTCCCTCAACTGGCTTCCGGAGCTCCGC +
Preference number: 6 (lower is better)
Translates to: DLVGHHHCDVHS*RTSLNWLPELR
Trigger: GCGGAGCTCCGGAAGCCAGTTGAGGGAAGTTCTCCATGAATGTACGTCACAATGATGATGACCGACCAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336824.8
ENST00000423424.5
CDS CCA 72 bp CATACCCCATTTGACACTAAAGCCATGAGATGTAACTaGGCCTTTGACAAGCGGTCTGGTAGGAGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: HTPFDTKAMRCN*AFDKRSGRRSR
Trigger: CCTGGACCTCCTACCAGACCGCTTGTCAAAGGCCCAGTTACATCTCATGGCTTTAGTGTCAAATGGGGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494000.1
CDS CAA 72 bp AATGTGTACCCCATTGCCGGACAAAGCTTTGTCAACTaGCAGTGCTTCTGGCTCCCGAAGAAGCACTGTCTG +
Preference number: 6 (lower is better)
Translates to: NVYPIAGQSFVN*QCFWLPKKHCL
Trigger: CAGACAGTGCTTCTTCGGGAGCCAGAAGCACTGCAAGTTGACAAAGCTTTGTCCGGCAATGGGGTACACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000469491.5
CDS CAA 72 bp TCCGATGCAGGAACATCCCACTCTAAGTGGACTTCTTaGTGCTTTGGTCTACCCAAAACCCTCGGTGGTCGA +
Preference number: 6 (lower is better)
Translates to: SDAGTSHSKWTS*CFGLPKTLGGR
Trigger: TCGACCACCGAGGGTTTTGGGTAGACCAAAGCACAAAGAAGTCCACTTAGAGTGGGATGTTCCTGCATCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
CDS CAA 90 bp CATGGCTACCTCTCCGTTCAGCAATGGTGGCAGTTCCAGAGGGATTaGGTCGGTCATCATCATTGTGACGTACATTCATGGAGAACTTCC +
Preference number: 6 (lower is better)
Translates to: HGYLSVQQWWQFQRD*VGHHHCDVHSWRTS
Trigger: GGAAGTTCTCCATGAATGTACGTCACAATGATGATGACCGACCAAATCCCTCTGGAACTGCCACCATTGCTGAACGGAGAGGTAGCCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000421757.5
ENST00000423424.5
ENST00000469491.5
CDS CAA 90 bp TTTCCGATGCAGGAACATCCCACTCTAAGTGGACTTCTTTGTGCTTaGGTCTACCCAAAACCCTCGGTGGTCGACATTGACCTGGTGCAA +
Preference number: 6 (lower is better)
Translates to: FPMQEHPTLSGLLCA*VYPKPSVVDIDLVQ
Trigger: TTGCACCAGGTCAATGTCGACCACCGAGGGTTTTGGGTAGACCAAAGCACAAAGAAGTCCACTTAGAGTGGGATGTTCCTGCATCGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
CDS TCA 72 bp TCCAGGTTTTCTCCAATTCCGTATCTGCCCTGGGCTTaGCAACAATGGCTGGCCCAGCATCTCTTTCTTTGT +
Preference number: 6 (lower is better)
Translates to: SRFSPIPYLPWA*QQWLAQHLFLC
Trigger: ACAAAGAAAGAGATGCTGGGCCAGCCATTGTTGTCAAGCCCAGGGCAGATACGGAATTGGAGAAAACCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494000.1
CDS GCA 72 bp GATGCAGGAACATCCCACTCTAAGTGGACTTCTTTGTaGTTTGGTCTACCCAAAACCCTCGGTGGTCGACAT +
Preference number: 6 (lower is better)
Translates to: DAGTSHSKWTSL*FGLPKTLGGRH
Trigger: ATGTCGACCACCGAGGGTTTTGGGTAGACCAAAGCACAAAGAAGTCCACTTAGAGTGGGATGTTCCTGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
CDS GCA 72 bp GGGACAGTCATCCCAACAGGTATTTGTCTCAGTGTGTaGCACCCAGCTCCATTTCAAGATAGGCAGGATCTA +
Preference number: 6 (lower is better)
Translates to: GTVIPTGICLSV*HPAPFQDRQDL
Trigger: TAGATCCTGCCTATCTTGAAATGGAGCTGGGTGGCACACACTGAGACAAATACCTGTTGGGATGACTGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483344.1
CDS CCA 72 bp ACTGATGCAGCATGCTCGGAGTTTGTACAAAGTGCCTaGTTTCAAGTGGGTGAAGGTGTATTCGGTAGCCGA +
Preference number: 6 (lower is better)
Translates to: TDAACSEFVQSA*FQVGEGVFGSR
Trigger: TCGGCTACCGAATACACCTTCACCCACTTGAAACCAGGCACTTTGTACAAACTCCGAGCATGCTGCATCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
CDS CCA 72 bp TGGTACGTCAAGTGGCAAGACACAAGAAACGCCATGTaGTGCCACAAAATGATGGCAAACCTAGCACTACGG +
Preference number: 6 (lower is better)
Translates to: WYVKWQDTRNAM*CHKMMANLALR
Trigger: CCGTAGTGCTAGGTTTGCCATCATTTTGTGGCACCACATGGCGTTTCTTGTGTCTTGCCACTTGACGTACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478016.1
CDS CAA 72 bp CTCTCCGTTCAGCAATGGTGGCAGTTCCAGAGGGATTaGGTCGGTCATCATCATTGTGACGTACATTCATGG +
Preference number: 6 (lower is better)
Translates to: LSVQQWWQFQRD*VGHHHCDVHSW
Trigger: CCATGAATGTACGTCACAATGATGATGACCGACCAAATCCCTCTGGAACTGCCACCATTGCTGAACGGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000421757.5
ENST00000423424.5
ENST00000469491.5
CDS CAA 72 bp CAGGAACATCCCACTCTAAGTGGACTTCTTTGTGCTTaGGTCTACCCAAAACCCTCGGTGGTCGACATTGAC +
Preference number: 6 (lower is better)
Translates to: QEHPTLSGLLCA*VYPKPSVVDID
Trigger: GTCAATGTCGACCACCGAGGGTTTTGGGTAGACCAAAGCACAAAGAAGTCCACTTAGAGTGGGATGTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
CDS CAA 90 bp TGGGTGGTGAAGCTAACAGGCTCGGAGCAGGATCCCTTTACGGAATaGTACATGGCATACACCCTGAAAACAAAACAGACACAGTCAGTG +
Preference number: 6 (lower is better)
Translates to: WVVKLTGSEQDPFTE*YMAYTLKTKQTQSV
Trigger: CACTGACTGTGTCTGTTTTGTTTTCAGGGTGTATGCCATGTACAATTCCGTAAAGGGATCCTGCTCCGAGCCTGTTAGCTTCACCACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483344.1
CDS TCA 72 bp GCAGTTCCAGAGGGATTTGGTCGGTCATCATCATTGTaGCGTACATTCATGGAGAACTTCCCTCAACTGGCT +
Preference number: 6 (lower is better)
Translates to: AVPEGFGRSSSL*RTFMENFPQLA
Trigger: AGCCAGTTGAGGGAAGTTCTCCATGAATGTACGTCACAATGATGATGACCGACCAAATCCCTCTGGAACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000421757.5
ENST00000423424.5
ENST00000469491.5
CDS TCA 72 bp ACAGGGGGAGCCCAGGACAACACAACTGCTCTTGCCTaGATATTAGAAACCTGTGGTTTCTCTATTCCCGAA +
Preference number: 6 (lower is better)
Translates to: TGGAQDNTTALA*ILETCGFSIPE
Trigger: TTCGGGAATAGAGAAACCACAGGTTTCTAATATTCAGGCAAGAGCAGTTGTGTTGTCCTGGGCTCCCCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000469491.5
CDS TCA 72 bp TTGTCCTTAGGGGGATCCCATTTGACACTAAAGCCATaGGATGTAACTGGGCCTTTGACAAGCGGTCTGGTA +
Preference number: 6 (lower is better)
Translates to: LSLGGSHLTLKP*DVTGPLTSGLV
Trigger: TACCAGACCGCTTGTCAAAGGCCCAGTTACATCTCATGGCTTTAGTGTCAAATGGGATCCCCCTAAGGACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000469491.5
CDS CCA 72 bp TCTCCGTTCAGCAATGGTGGCAGTTCCAGAGGGATTTaGTCGGTCATCATCATTGTGACGTACATTCATGGA +
Preference number: 6 (lower is better)
Translates to: SPFSNGGSSRGI*SVIIIVTYIHG
Trigger: TCCATGAATGTACGTCACAATGATGATGACCGACCAAATCCCTCTGGAACTGCCACCATTGCTGAACGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000421757.5
ENST00000423424.5
ENST00000469491.5
CDS CCA 72 bp CATGAATGGGAGGAATGGATCCATTGGGTGACATCATaGGAACTTCAGCAGGTCCTTGAATGCACTGAAGTG +
Preference number: 6 (lower is better)
Translates to: HEWEEWIHWVTS*ELQQVLECTEV
Trigger: CACTTCAGTGCATTCAAGGACCTGCTGAAGTTCCCATGATGTCACCCAATGGATCCATTCCTCCCATTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000443501.1
ENST00000469491.5
ENST00000478016.1
CDS CCA 72 bp GATTTGGTCGGTCATCATCATTGTGACGTACATTCATaGAGAACTTCCCTCAACTGGCTTCCTTCCCTAGGG +
Preference number: 6 (lower is better)
Translates to: DLVGHHHCDVHS*RTSLNWLPSLG
Trigger: CCCTAGGGAAGGAAGCCAGTTGAGGGAAGTTCTCCATGAATGTACGTCACAATGATGATGACCGACCAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415807.7
ENST00000421757.5
ENST00000469491.5
CDS CCA 72 bp TGTGTCTCCTTTTCTCTGGTTCTCTGGTACGTCAAGTaGCAAGACACAAGAAACGCCATGTGGTGCCACAAA +
Preference number: 6 (lower is better)
Translates to: CVSFSLVLWYVK*QDTRNAMWCHK
Trigger: TTTGTGGCACCACATGGCGTTTCTTGTGTCTTGCCACTTGACGTACCAGAGAACCAGAGAAAAGGAGACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478016.1
CDS CAA 90 bp ATGATGGCTGCAAACTGTTCATCAGTAGGCATCATGCTCTTCATTTaGGGATCATCTAAGCTCCCCATGTCCCCTGTAAGCATGACCTCA +
Preference number: 6 (lower is better)
Translates to: MMAANCSSVGIMLFI*GSSKLPMSPVSMTS
Trigger: TGAGGTCATGCTTACAGGGGACATGGGGAGCTTAGATGATCCCAAAATGAAGAGCATGATGCCTACTGATGAACAGTTTGCAGCCATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
CDS TCA 72 bp CCACCTCTTGGCTATAACCACTGTAGAGAAAGAAAGTaGGGCACACAGTTAGAAGCATGTGAAGAGGCTTGG +
Preference number: 6 (lower is better)
Translates to: PPLGYNHCRERK*GTQLEACEEAW
Trigger: CCAAGCCTCTTCACATGCTTCTAACTGTGTGCCTCACTTTCTTTCTCTACAGTGGTTATAGCCAAGAGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494000.1
CDS TCA 72 bp CAGCAGCAAAACATACCCCATTTGACACTAAAGCCATaGGATGTAACTGGGCCTTTGACAAGCGGTCTGGTA +
Preference number: 6 (lower is better)
Translates to: QQQNIPHLTLKP*DVTGPLTSGLV
Trigger: TACCAGACCGCTTGTCAAAGGCCCAGTTACATCTCATGGCTTTAGTGTCAAATGGGGTATGTTTTGCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494000.1
CDS CCA 72 bp GGATTACCTGTGAGATATAACCTGGAGGCACATGAATaGGAGGAATGGATCCATTGGGTGACATCATGGGAA +
Preference number: 6 (lower is better)
Translates to: GLPVRYNLEAHE*EEWIHWVTSWE
Trigger: TTCCCATGATGTCACCCAATGGATCCATTCCTCCCATTCATGTGCCTCCAGGTTATATCTCACAGGTAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478016.1
CDS CCA 72 bp GAATTCCTTTCAAGATCTGTACTGCTACCTTCACCTTaGTTCTTAGAGACCCCTAGTGGGGCCTTCGCAATA +
Preference number: 6 (lower is better)
Translates to: EFLSRSVLLPSP*FLETPSGAFAI
Trigger: TATTGCGAAGGCCCCACTAGGGGTCTCTAAGAACCAAGGTGAAGGTAGCAGTACAGATCTTGAAAGGAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494000.1
CDS CAA 72 bp TGTAGTGTGTACACAATGTCCTCAGCAGCATGTGTCTaGGAGTTACTGTCTCCCCATTTTAGCTTCAGGCTC +
Preference number: 6 (lower is better)
Translates to: CSVYTMSSAACV*ELLSPHFSFRL
Trigger: GAGCCTGAAGCTAAAATGGGGAGACAGTAACTCCAAGACACATGCTGCTGAGGACATTGTGTACACACTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
CDS CAA 72 bp GCAAACTGTTCATCAGTAGGCATCATGCTCTTCATTTaGGGATCATCTAAGCTCCCCATGTCCCCTGTAAGC +
Preference number: 6 (lower is better)
Translates to: ANCSSVGIMLFI*GSSKLPMSPVS
Trigger: GCTTACAGGGGACATGGGGAGCTTAGATGATCCCAAAATGAAGAGCATGATGCCTACTGATGAACAGTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
CDS TCA 72 bp TATCATTTTCATCCTCCTGAATTTCCAAGGTGTAGGTaGTCACTTCCTCGGGTGAACAGCCTTCTGGCTTAC +
Preference number: 6 (lower is better)
Translates to: YHFHPPEFPRCR*SLPRVNSLLAY
Trigger: GTAAGCCAGAAGGCTGTTCACCCGAGGAAGTGATCACCTACACCTTGGAAATTCAGGAGGATGAAAATGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000469491.5
ENST00000494000.1
CDS CAA 72 bp AAGCTAACAGGCTCGGAGCAGGATCCCTTTACGGAATaGTACATGGCATACACCCTGAAAACAAAACAGACA +
Preference number: 6 (lower is better)
Translates to: KLTGSEQDPFTE*YMAYTLKTKQT
Trigger: TGTCTGTTTTGTTTTCAGGGTGTATGCCATGTACAATTCCGTAAAGGGATCCTGCTCCGAGCCTGTTAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483344.1
CDS GCA 72 bp TTGTTTAACTCTTTCTTCATTGTCAGTTCTGTTTGCTaGTGTCTTCTCAGCACCCAGAACCAAGCCTGGCAT +
Preference number: 6 (lower is better)
Translates to: LFNSFFIVSSVC*CLLSTQNQAWH
Trigger: ATGCCAGGCTTGGTTCTGGGTGCTGAGAAGACAGCAGCAAACAGAACTGACAATGAAGAAAGAGTTAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476794.1
CDS CCA 72 bp TGTTCCATCCTCTGCTCTTATTGTGAAAGTCTCACCTaGATTAACTTGAACGAGAATAACCTGCTGAGCTGC +
Preference number: 6 (lower is better)
Translates to: CSILCSYCESLT*INLNENNLLSC
Trigger: GCAGCTCAGCAGGTTATTCTCGTTCAAGTTAATCCAGGTGAGACTTTCACAATAAGAGCAGAGGATGGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000421757.5
ENST00000423424.5
ENST00000469491.5
CDS CAA 72 bp ATCTCTAGCAAGTACTTGAGGATTTCTGAACCACCATaGTCCTTAGGGGGATCCCATTTGACACTAAAGCCA +
Preference number: 6 (lower is better)
Translates to: ISSKYLRISEPP*SLGGSHLTLKP
Trigger: TGGCTTTAGTGTCAAATGGGATCCCCCTAAGGACAATGGTGGTTCAGAAATCCTCAAGTACTTGCTAGAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000469491.5
CDS TCA 72 bp AGGCTTGCTGTACTGGTCTTCTCGGGTGATGTAGGTTaGCATTCCATAAAATGGTATAATTTCTTGCTCACC +
Preference number: 6 (lower is better)
Translates to: RLAVLVFSGDVG*HSIKWYNFLLT
Trigger: GGTGAGCAAGAAATTATACCATTTTATGGAATGTCAACCTACATCACCCGAGAAGACCAGTACAGCAAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000443501.1
ENST00000469491.5
CDS CAA 72 bp CTCTGCTCTTATTGTGAAAGTCTCACCTGGATTAACTaGAACGAGAATAACCTGCTGAGCTGCATCTCCATT +
Preference number: 6 (lower is better)
Translates to: LCSYCESLTWIN*NENNLLSCISI
Trigger: AATGGAGATGCAGCTCAGCAGGTTATTCTCGTTCAAGTTAATCCAGGTGAGACTTTCACAATAAGAGCAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000421757.5
ENST00000423424.5
ENST00000469491.5
CDS TCA 72 bp ATAGTGAGTAGAGAAGTCCATCAAATGGATTACCTGTaGGATATAACCTGGAGGCACATGAATGGGAGGAAT +
Preference number: 6 (lower is better)
Translates to: IVSREVHQMDYL*DITWRHMNGRN
Trigger: ATTCCTCCCATTCATGTGCCTCCAGGTTATATCTCACAGGTAATCCATTTGATGGACTTCTCTACTCACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478016.1
CDS TCA 72 bp ACTACGGTACCCAAATTAACTCCTGGAATATGGCTTTaGAGCCTCAACATATATTCTGTTGGAGCAACGACA +
Preference number: 6 (lower is better)
Translates to: TTVPKLTPGIWL*SLNIYSVGATT
Trigger: TGTCGTTGCTCCAACAGAATATATGTTGAGGCTTCAAAGCCATATTCCAGGAGTTAATTTGGGTACCGTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478016.1
CDS TCA 72 bp CTGAAACATGGCCTTTTCAAAGCCTCTTTAATCAATTaGTACCTTACAGTACACCCGTTCTCGCCTTTCTCA +
Preference number: 6 (lower is better)
Translates to: LKHGLFKASLIN*YLTVHPFSPFS
Trigger: TGAGAAAGGCGAGAACGGGTGTACTGTAAGGTATCAATTGATTAAAGAGGCTTTGAAAAGGCCATGTTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494000.1
CDS CCA 72 bp ATTTATAGCCTGAATTCTGATCCGGTAGGTGGTTTCTaGAAGGAGATCTTTCATAACATGCATGGTGGTGTT +
Preference number: 6 (lower is better)
Translates to: IYSLNSDPVGGF*KEIFHNMHGGV
Trigger: AACACCACCATGCATGTTATGAAAGATCTCCTTCCAGAAACCACCTACCGGATCAGAATTCAGGCTATAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
CDS GCA 72 bp GAGAGAAGGATGTGTGTAGGTTATATGCAAAGACTATaGCATTTTATATCAGTGACTGGGGCATCCATAGAT +
Preference number: 6 (lower is better)
Translates to: ERRMCVGYMQRL*HFISVTGASID
Trigger: ATCTATGGATGCCCCAGTCACTGATATAAAATGGCATAGTCTTTGCATATAACCTACACACATCCTTCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494000.1
CDS CCA 72 bp ATGTTAAAAAGAGGTTCTTTAGGTTGGAAAGAGGGTTaGGGACCACCGATGTGCAAAACCTTTAAGAAGATT +
Preference number: 6 (lower is better)
Translates to: MLKRGSLGWKEG*GPPMCKTFKKI
Trigger: AATCTTCTTAAAGGTTTTGCACATCGGTGGTCCCCAACCCTCTTTCCAACCTAAAGAACCTCTTTTTAACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494000.1
CDS CAA 72 bp AGAAACCTGTGGTTTCTCTATTCCCGAAAGAATGTCTaGCACCCTCTTTACTTCCAACTCATATTCTTGCAA +
Preference number: 6 (lower is better)
Translates to: RNLWFLYSRKNV*HPLYFQLIFLQ
Trigger: TTGCAAGAATATGAGTTGGAAGTAAAGAGGGTGCAAGACATTCTTTCGGGAATAGAGAAACCACAGGTTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336824.8
ENST00000415807.7
ENST00000416957.5
ENST00000469491.5
CDS TCA 72 bp TCTGCTCTTATTGTGAAAGTCTCACCTGGATTAACTTaGACGAGAATAACCTCTGACCAGATTTTCTCTTTG +
Preference number: 6 (lower is better)
Translates to: SALIVKVSPGLT*TRITSDQIFSL
Trigger: CAAAGAGAAAATCTGGTCAGAGGTTATTCTCGTTCAAGTTAATCCAGGTGAGACTTTCACAATAAGAGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443501.1
ENST00000478016.1