Pregenerated sensors for FNDC11 (Homo sapiens)
Ensembl gene IDs: ENSG00000125531Ensembl transcript IDs: ENST00000370097.2, ENST00000370098.4, ENST00000611891.1, ENST00000615526.1
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CGCCAGCCGCCGCTCCACCAGCGCCCAGTCGGCCAGGAAGGGCCGTaGGTCTGGCGACCGGAGCAGGGCATCCAGCTCAGCACGGCCATG | + |
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Preference number: 5 (lower is better) Translates to: RQPPLHQRPVGQEGP*VWRPEQGIQLSTAM Trigger: CATGGCCGTGCTGAGCTGGATGCCCTGCTCCGGTCGCCAGACCCACGGCCCTTCCTGGCCGACTGGGCGCTGGTGGAGCGGCGGCTGGCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000615526.1 |
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| CDS CCA 90 bp | CCGCCGCTCCACCAGCGCCCAGTCGGCCAGGAAGGGCCGTGGGTCTaGCGACCGGAGCAGGGCATCCAGCTCAGCACGGCCATGGTCGAG | + |
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Preference number: 5 (lower is better) Translates to: PPLHQRPVGQEGPWV*RPEQGIQLSTAMVE Trigger: CTCGACCATGGCCGTGCTGAGCTGGATGCCCTGCTCCGGTCGCCAGACCCACGGCCCTTCCTGGCCGACTGGGCGCTGGTGGAGCGGCGG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000615526.1 |
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| CDS GCA 90 bp | CTGTCCGTGGGTGCACCGGCTGAGTGCAGCTGTGGCCCCAGGCTCTaGCGCAGCTCCCTGGAGAGCAAGCCGCACCCCTGGTTGCTGCCC | + |
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Preference number: 5 (lower is better) Translates to: LSVGAPAECSCGPRL*RSSLESKPHPWLLP Trigger: GGGCAGCAACCAGGGGTGCGGCTTGCTCTCCAGGGAGCTGCGGCAGAGCCTGGGGCCACAGCTGCACTCAGCCGGTGCACCCACGGACAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615526.1 |
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| CDS GCA 90 bp | ACAGAGTGGCTGAGGGCGGGCCCCTCCAGGGGCTCCGGCTTGGTGTaGAGGGTGAGGCTGTCCCTCCAGGGCTCGTACACCAGCGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: TEWLRAGPSRGSGLV*RVRLSLQGSYTSVE Trigger: CTCCACGCTGGTGTACGAGCCCTGGAGGGACAGCCTCACCCTGCACACCAAGCCGGAGCCCCTGGAGGGGCCCGCCCTCAGCCACTCTGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000615526.1 |
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| CDS CCA 90 bp | CCAGGGCTTGAGCCCAGTGCTGAGCCGAGTCTGACCCTCTGTCCGTaGGTGCACCGGCTGAGTGCAGCTGTGGCCCCAGGCTCTGCCGCA | + |
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Preference number: 5 (lower is better) Translates to: PGLEPSAEPSLTLCP*VHRLSAAVAPGSAA Trigger: TGCGGCAGAGCCTGGGGCCACAGCTGCACTCAGCCGGTGCACCCACGGACAGAGGGTCAGACTCGGCTCAGCACTGGGCTCAAGCCCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615526.1 |
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| CDS CCA 90 bp | GGGCCCGGAGGAGCAGCCCTCCTCCCACGCTGTGGGCCCTCGCTGTaGACCCGGGATCCTGTCCCTGGTGAGCTCATGGACTCCACAAGT | + |
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Preference number: 5 (lower is better) Translates to: GPGGAALLPRCGPSL*TRDPVPGELMDSTS Trigger: ACTTGTGGAGTCCATGAGCTCACCAGGGACAGGATCCCGGGTCCACAGCGAGGGCCCACAGCGTGGGAGGAGGGCTGCTCCTCCGGGCCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615526.1 |
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| CDS CCA 90 bp | TGTAGGGCACAGAGACAGGCCTCACCAAAGACGAGGCCAGCTGGCTaGTCAGCATGGGAGGAGGGCGCCCAGGCCTGGGCCCGGAGGAGC | + |
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Preference number: 5 (lower is better) Translates to: CRAQRQASPKTRPAG*SAWEEGAQAWARRS Trigger: GCTCCTCCGGGCCCAGGCCTGGGCGCCCTCCTCCCATGCTGACCAGCCAGCTGGCCTCGTCTTTGGTGAGGCCTGTCTCTGTGCCCTACA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615526.1 |
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| CDS CCA 90 bp | CCCCTCGGGGACATTCGCGGGCCATCCTCCCGCTCCGGTTCTCCCTaGGGACGCTCCACGCCTCACCGCAGTTGTAGGGCACAGAGACAG | + |
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Preference number: 5 (lower is better) Translates to: PLGDIRGPSSRSGSP*GRSTPHRSCRAQRQ Trigger: CTGTCTCTGTGCCCTACAACTGCGGTGAGGCGTGGAGCGTCCCCAGGGAGAACCGGAGCGGGAGGATGGCCCGCGAATGTCCCCGAGGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615526.1 |
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| CDS TCA 90 bp | TGGGCAGCAGGTTTCGGACGTCGAAGGTGCAGGCAGCCACGGGGATaGCGCCACACTGGGCGCACTCCTGCTGTGTCCGCGGGTCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: WAAGFGRRRCRQPRG*RHTGRTPAVSAGPA Trigger: TGCTGGACCCGCGGACACAGCAGGAGTGCGCCCAGTGTGGCGTCATCCCCGTGGCTGCCTGCACCTTCGACGTCCGAAACCTGCTGCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000615526.1 |
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| CDS GCA 90 bp | GGCTCTGCCGCAGCTCCCTGGAGAGCAAGCCGCACCCCTGGTTGCTaGCCCGGCTCCCAGCAACCCTGGAGATCTCAGGTTGTCACAGCC | + |
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Preference number: 5 (lower is better) Translates to: GSAAAPWRASRTPGC*PGSQQPWRSQVVTA Trigger: GGCTGTGACAACCTGAGATCTCCAGGGTTGCTGGGAGCCGGGGCAGCAACCAGGGGTGCGGCTTGCTCTCCAGGGAGCTGCGGCAGAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615526.1 |
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| CDS CCA 90 bp | TTTCGGACGTCGAAGGTGCAGGCAGCCACGGGGATGACGCCACACTaGGCGCACTCCTGCTGTGTCCGCGGGTCCAGCAGCCTGAAGCGC | + |
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Preference number: 5 (lower is better) Translates to: FRTSKVQAATGMTPH*AHSCCVRGSSSLKR Trigger: GCGCTTCAGGCTGCTGGACCCGCGGACACAGCAGGAGTGCGCCCAGTGTGGCGTCATCCCCGTGGCTGCCTGCACCTTCGACGTCCGAAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000615526.1 |
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| CDS TCA 90 bp | CCTCGGGAATCCCTCGGAGGAATTTGGGAGAGAGGCAGTGGCCGGTaGCCAGGCGGATGGACCACCCAGCGCCTGGACAGAGGAGAGGGG | + |
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Preference number: 5 (lower is better) Translates to: PRESLGGIWERGSGR*PGGWTTQRLDRGEG Trigger: CCCCTCTCCTCTGTCCAGGCGCTGGGTGGTCCATCCGCCTGGTCACCGGCCACTGCCTCTCTCCCAAATTCCTCCGAGGGATTCCCGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615526.1 |
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| CDS CCA 90 bp | CGTGGGTCTGGCGACCGGAGCAGGGCATCCAGCTCAGCACGGCCATaGTCGAGCTGTTCCAACAGGTCCCCGAGCAGCAGGAGCTGGATC | + |
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Preference number: 5 (lower is better) Translates to: RGSGDRSRASSSARP*SSCSNRSPSSRSWI Trigger: GATCCAGCTCCTGCTGCTCGGGGACCTGTTGGAACAGCTCGACCATGGCCGTGCTGAGCTGGATGCCCTGCTCCGGTCGCCAGACCCACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000615526.1 |
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| CDS CCA 90 bp | GCGCACTCCTCGGGAATCCCTCGGAGGAATTTGGGAGAGAGGCAGTaGCCGGTGACCAGGCGGATGGACCACCCAGCGCCTGGACAGAGG | + |
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Preference number: 5 (lower is better) Translates to: AHSSGIPRRNLGERQ*PVTRRMDHPAPGQR Trigger: CCTCTGTCCAGGCGCTGGGTGGTCCATCCGCCTGGTCACCGGCCACTGCCTCTCTCCCAAATTCCTCCGAGGGATTCCCGAGGAGTGCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615526.1 |
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| CDS TCA 90 bp | GCTGGCTGGATGGTGACGAACCAGCGCAGCCGGGCCCAGTCCTGGTaGGCCGCCGACGCCTTTCGGTCAAACACGACAGGCATCTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: AGWMVTNQRSRAQSW*AADAFRSNTTGILV Trigger: CACCAAGATGCCTGTCGTGTTTGACCGAAAGGCGTCGGCGGCTCACCAGGACTGGGCCCGGCTGCGCTGGTTCGTCACCATCCAGCCAGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000615526.1 |
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| CDS TCA 90 bp | GTGGAACACCCAGAGAGGCTGGTCGTGAACCCGGAAAGGTGGTTCTaGGCCCCTCGCTGCTTCCTACACGCCCCGGTCCCAGGCCCGCTT | + |
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Preference number: 5 (lower is better) Translates to: VEHPERLVVNPERWF*APRCFLHAPVPGPL Trigger: AAGCGGGCCTGGGACCGGGGCGTGTAGGAAGCAGCGAGGGGCTCAGAACCACCTTTCCGGGTTCACGACCAGCCTCTCTGGGTGTTCCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615526.1 |
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| CDS GCA 90 bp | CACTTACGCAGCAGCTGCATGCGGGCGTGGTGGCGCTTGAGCAGGTaGGGACTCAGGTCCGAGGTCAGGAACTCACGCAGGGCATTGCGG | + |
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Preference number: 5 (lower is better) Translates to: HLRSSCMRAWWRLSR*GLRSEVRNSRRALR Trigger: CCGCAATGCCCTGCGTGAGTTCCTGACCTCGGACCTGAGTCCGCACCTGCTCAAGCGCCACCACGCCCGCATGCAGCTGCTGCGTAAGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000611891.1 ENST00000615526.1 |
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| CDS GCA 90 bp | AAGGTGCAGGCAGCCACGGGGATGACGCCACACTGGGCGCACTCCTaGTGTGTCCGCGGGTCCAGCAGCCTGAAGCGCAACTCATACTGC | + |
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Preference number: 5 (lower is better) Translates to: KVQAATGMTPHWAHS*CVRGSSSLKRNSYC Trigger: GCAGTATGAGTTGCGCTTCAGGCTGCTGGACCCGCGGACACAGCAGGAGTGCGCCCAGTGTGGCGTCATCCCCGTGGCTGCCTGCACCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000615526.1 |
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| CDS CCA 90 bp | CGGGTCCAGCAGCCTGAAGCGCAACTCATACTGCTCCGATGTGGCTaGCTGGATGGTGACGAACCAGCGCAGCCGGGCCCAGTCCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: RVQQPEAQLILLRCG*LDGDEPAQPGPVLV Trigger: CACCAGGACTGGGCCCGGCTGCGCTGGTTCGTCACCATCCAGCCAGCCACATCGGAGCAGTATGAGTTGCGCTTCAGGCTGCTGGACCCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000615526.1 |
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| CDS TCA 90 bp | AGTAGGAGCACTTACGCAGCAGCTGCATGCGGGCGTGGTGGCGCTTaGGCAGGTGCGGACTCAGGTCCGAGGTCAGGAACTCACGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: SRSTYAAAACGRGGA*AGADSGPRSGTHAG Trigger: CCCTGCGTGAGTTCCTGACCTCGGACCTGAGTCCGCACCTGCTCAAGCGCCACCACGCCCGCATGCAGCTGCTGCGTAAGTGCTCCTACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000611891.1 ENST00000615526.1 |
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| CDS GCA 90 bp | GCAGGTGCGGACTCAGGTCCGAGGTCAGGAACTCACGCAGGGCATTaGGGCGCTCGGTGTAGGTCTTCCACGCCTCTGGTTCCAGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: AGADSGPRSGTHAGH*GARCRSSTPLVPAA Trigger: AGCTGCTGGAACCAGAGGCGTGGAAGACCTACACCGAGCGCCGCAATGCCCTGCGTGAGTTCCTGACCTCGGACCTGAGTCCGCACCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000611891.1 ENST00000615526.1 |
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| CDS GCA 90 bp | TCCTGCTGTGTCCGCGGGTCCAGCAGCCTGAAGCGCAACTCATACTaGTCCGATGTGGCTGGCTGGATGGTGACGAACCAGCGCAGCCGG | + |
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Preference number: 5 (lower is better) Translates to: SCCVRGSSSLKRNSY*SDVAGWMVTNQRSR Trigger: CCGGCTGCGCTGGTTCGTCACCATCCAGCCAGCCACATCGGAGCAGTATGAGTTGCGCTTCAGGCTGCTGGACCCGCGGACACAGCAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000615526.1 |
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| CDS CCA 90 bp | CAGGCTTGGCAACCACTGCAGGTGCTGAACAGCAGCGCTTCTCCGTaGAACCCCCACTTCTCCGTGGGCACGGGCGGCTGTTGGACTGTG | + |
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Preference number: 5 (lower is better) Translates to: QAWQPLQVLNSSASP*NPHFSVGTGGCWTV Trigger: CACAGTCCAACAGCCGCCCGTGCCCACGGAGAAGTGGGGGTTCCACGGAGAAGCGCTGCTGTTCAGCACCTGCAGTGGTTGCCAAGCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611891.1 |
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| CDS CCA 90 bp | ATGGCCTGGGCATTGACTGACTCAGAAGCCGGTCATCGGGCAGCATaGGGCATCTGGGTGCCTGGCCTGCGGCCGAGCTCCCTGCAATCA | + |
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Preference number: 5 (lower is better) Translates to: MAWALTDSEAGHRAA*GIWVPGLRPSSLQS Trigger: TGATTGCAGGGAGCTCGGCCGCAGGCCAGGCACCCAGATGCCCCATGCTGCCCGATGACCGGCTTCTGAGTCAGTCAATGCCCAGGCCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611891.1 |
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| CDS CCA 90 bp | AGAGCAAGCCGCACCCCTGGTTGCTGCCCCGGCTCCCAGCAACCCTaGAGATCTCAGGTTGTCACAGCCACTTGGGCCTTGGACGACCCA | + |
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Preference number: 5 (lower is better) Translates to: RASRTPGCCPGSQQP*RSQVVTATWALDDP Trigger: TGGGTCGTCCAAGGCCCAAGTGGCTGTGACAACCTGAGATCTCCAGGGTTGCTGGGAGCCGGGGCAGCAACCAGGGGTGCGGCTTGCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615526.1 |
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| CDS TCA 90 bp | CTCCACTTCCCCGCAGTGGCCTTTGGGTATGGCCTGGGCATTGACTaGCTCAGAAGCCGGTCATCGGGCAGCATGGGGCATCTGGGTGCC | + |
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Preference number: 5 (lower is better) Translates to: LHFPAVAFGYGLGID*LRSRSSGSMGHLGA Trigger: GGCACCCAGATGCCCCATGCTGCCCGATGACCGGCTTCTGAGTCAGTCAATGCCCAGGCCATACCCAAAGGCCACTGCGGGGAAGTGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000611891.1 |
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| CDS TCA 90 bp | CAGCCTCCACTTCCCCGCAGTGGCCTTTGGGTATGGCCTGGGCATTaGCTGACTCAGAAGCCGGTCATCGGGCAGCATGGGGCATCTGGG | + |
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Preference number: 5 (lower is better) Translates to: QPPLPRSGLWVWPGH*LTQKPVIGQHGASG Trigger: CCCAGATGCCCCATGCTGCCCGATGACCGGCTTCTGAGTCAGTCAATGCCCAGGCCATACCCAAAGGCCACTGCGGGGAAGTGGAGGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000611891.1 |
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| CDS CCA 90 bp | CTCACGCAGGGCATTGCGGCGCTCGGTGTAGGTCTTCCACGCCTCTaGTTCCAGCAGCTGCTGGTCATCTGCCTCCTCCTGGTCCAGGAA | + |
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Preference number: 5 (lower is better) Translates to: LTQGIAALGVGLPRL*FQQLLVICLLLVQE Trigger: TTCCTGGACCAGGAGGAGGCAGATGACCAGCAGCTGCTGGAACCAGAGGCGTGGAAGACCTACACCGAGCGCCGCAATGCCCTGCGTGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000611891.1 ENST00000615526.1 |
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| CDS CCA 90 bp | GTGCCCACCTTCTTCATGCGCTGGAACTTCCAGGGGTCGATGAGCTaGAACAAGGCGCTAGGCAGCACCAGCGGGTTCTGGTCGCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: VPTFFMRWNFQGSMS*NKALGSTSGFWSPR Trigger: CCTGGGCGACCAGAACCCGCTGGTGCTGCCTAGCGCCTTGTTCCAGCTCATCGACCCCTGGAAGTTCCAGCGCATGAAGAAGGTGGGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000615526.1 |
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| CDS CCA 90 bp | GTGGCCTGTGGGACAGGACAGGGAAGAACTAGGACTGCGGACTTCTaGCCAGAACCGCCTGACCTGTGGCCTTGCAAGGGCCCCAGTTCC | + |
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Preference number: 5 (lower is better) Translates to: VACGTGQGRTRTADF*PEPPDLWPCKGPSS Trigger: GGAACTGGGGCCCTTGCAAGGCCACAGGTCAGGCGGTTCTGGCCAGAAGTCCGCAGTCCTAGTTCTTCCCTGTCCTGTCCCACAGGCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615526.1 |
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| CDS CCA 90 bp | GGTCGAGCTGTTCCAACAGGTCCCCGAGCAGCAGGAGCTGGATCTTaGTCTGAGCTGTGCCCACCTTCTTCATGCGCTGGAACTTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: GRAVPTGPRAAGAGS*SELCPPSSCAGTSR Trigger: CCTGGAAGTTCCAGCGCATGAAGAAGGTGGGCACAGCTCAGACCAAGATCCAGCTCCTGCTGCTCGGGGACCTGTTGGAACAGCTCGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000615526.1 |
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| CDS GCA 90 bp | CGTGCCTCTGTGACGTGTGAGGGATGTTTTCTAGTCTCCAGCAGCTaGCCAGGTGGAACACCCAGAGAGGCTGGTCGTGAACCCGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: RASVTCEGCFLVSSS*PGGTPREAGREPGK Trigger: CTTTCCGGGTTCACGACCAGCCTCTCTGGGTGTTCCACCTGGGCAGCTGCTGGAGACTAGAAAACATCCCTCACACGTCACAGAGGCACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615526.1 |
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| CDS GCA 90 bp | GGGCCACACAGGTACGTGGTGAAGTCATATCTGCCCGGGAAGGGTTaGCCTTTTGGGCGTGAGGCAGATATGACTTCACGAGCGCACTCC | + |
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Preference number: 5 (lower is better) Translates to: GPHRYVVKSYLPGKG*PFGREADMTSRAHS Trigger: GGAGTGCGCTCGTGAAGTCATATCTGCCTCACGCCCAAAAGGGCAACCCTTCCCGGGCAGATATGACTTCACCACGTACCTGTGTGGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615526.1 |
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| CDS GCA 90 bp | TGGACCTCTGTCCTTCTTCGGGGGCACAACTCGATGGGAAGAGGCTaGCTGGAGGGCTGGATGGGCAGCCTACAGATCTGGACACAGTTT | + |
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Preference number: 5 (lower is better) Translates to: WTSVLLRGHNSMGRG*LEGWMGSLQIWTQF Trigger: AAACTGTGTCCAGATCTGTAGGCTGCCCATCCAGCCCTCCAGGCAGCCTCTTCCCATCGAGTTGTGCCCCCGAAGAAGGACAGAGGTCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000615526.1 |
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| CDS CCA 90 bp | CCTCTGTCCTTCTTCGGGGGCACAACTCGATGGGAAGAGGCTGCCTaGAGGGCTGGATGGGCAGCCTACAGATCTGGACACAGTTTATAC | + |
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Preference number: 5 (lower is better) Translates to: PLSFFGGTTRWEEAA*RAGWAAYRSGHSLY Trigger: GTATAAACTGTGTCCAGATCTGTAGGCTGCCCATCCAGCCCTCCAGGCAGCCTCTTCCCATCGAGTTGTGCCCCCGAAGAAGGACAGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000615526.1 |
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| CDS CCA 90 bp | CCTGGTGAGCTCATGGACTCCACAAGTGACACTCCATTTCCCAGATaGAGCCTGAGGCTAAGAAGCTTGGTTCTTGTTCTCATCCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: PGELMDSTSDTPFPR*SLRLRSLVLVLIQG Trigger: GCCCTGGATGAGAACAAGAACCAAGCTTCTTAGCCTCAGGCTCCATCTGGGAAATGGAGTGTCACTTGTGGAGTCCATGAGCTCACCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615526.1 |
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| CDS CCA 90 bp | CACTTAAATAAGCAGGCAATTTTTCACCTGAGTGCAGCTCAGGCTTaGCAACCACTGCAGGTGCTGAACAGCAGCGCTTCTCCGTGGAAC | + |
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Preference number: 5 (lower is better) Translates to: HLNKQAIFHLSAAQA*QPLQVLNSSASPWN Trigger: GTTCCACGGAGAAGCGCTGCTGTTCAGCACCTGCAGTGGTTGCCAAGCCTGAGCTGCACTCAGGTGAAAAATTGCCTGCTTATTTAAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611891.1 |
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| CDS TCA 90 bp | CTACAGATCTGGACACAGTTTATACTGAGGGGCAAAAACCTCTACTaGCAACCAGTGGCCTGTGGGACAGGACAGGGAAGAACTAGGACT | + |
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Preference number: 5 (lower is better) Translates to: LQIWTQFILRGKNLY*QPVACGTGQGRTRT Trigger: AGTCCTAGTTCTTCCCTGTCCTGTCCCACAGGCCACTGGTTGTCAGTAGAGGTTTTTGCCCCTCAGTATAAACTGTGTCCAGATCTGTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615526.1 |
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| CDS CCA 90 bp | TCGCCTGTCCTCAGAATTTACTGCAGAGGCCGGAGGCTCGGCACCTaGTGCAGGGTTAATGATGTTAAAATATCTGGCCAACACTTAAAT | + |
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Preference number: 5 (lower is better) Translates to: SPVLRIYCRGRRLGT*CRVNDVKISGQHLN Trigger: ATTTAAGTGTTGGCCAGATATTTTAACATCATTAACCCTGCACCAGGTGCCGAGCCTCCGGCCTCTGCAGTAAATTCTGAGGACAGGCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611891.1 |
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| CDS GCA 90 bp | CCTGTCCTCAGAATTTACTGCAGAGGCCGGAGGCTCGGCACCTGGTaGAGGGTTAATGATGTTAAAATATCTGGCCAACACTTAAATAAG | + |
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Preference number: 5 (lower is better) Translates to: PVLRIYCRGRRLGTW*RVNDVKISGQHLNK Trigger: CTTATTTAAGTGTTGGCCAGATATTTTAACATCATTAACCCTGCACCAGGTGCCGAGCCTCCGGCCTCTGCAGTAAATTCTGAGGACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611891.1 |
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| CDS CAA 90 bp | GCGCGCGGACTTCCCAGAGCCCAGCCTCCCTCCGCACTCCGCGGGTaGCCCTGGGGACCAGCGGCCTTTGTGACGCTGCGGCCCGGGGGC | + |
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Preference number: 6 (lower is better) Translates to: ARGLPRAQPPSALRG*PWGPAAFVTLRPGG Trigger: GCCCCCGGGCCGCAGCGTCACAAAGGCCGCTGGTCCCCAGGGCAACCCGCGGAGTGCGGAGGGAGGCTGGGCTCTGGGAAGTCCGCGCGC 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615526.1 |
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| CDS CCA 72 bp | AGAGCCCAGCCTCCCTCCGCACTCCGCGGGTTGCCCTaGGGACCAGCGGCCTTTGTGACGCTGCGGCCCGGG | + |
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Preference number: 6 (lower is better) Translates to: RAQPPSALRGLP*GPAAFVTLRPG Trigger: CCCGGGCCGCAGCGTCACAAAGGCCGCTGGTCCCCAGGGCAACCCGCGGAGTGCGGAGGGAGGCTGGGCTCT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615526.1 |
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| CDS CCA 72 bp | CACCAGCGCCCAGTCGGCCAGGAAGGGCCGTGGGTCTaGCGACCGGAGCAGGGCATCCAGCTCAGCACGGCC | + |
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Preference number: 6 (lower is better) Translates to: HQRPVGQEGPWV*RPEQGIQLSTA Trigger: GGCCGTGCTGAGCTGGATGCCCTGCTCCGGTCGCCAGACCCACGGCCCTTCCTGGCCGACTGGGCGCTGGTG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000615526.1 |
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| CDS CCA 72 bp | CCGCTCCACCAGCGCCCAGTCGGCCAGGAAGGGCCGTaGGTCTGGCGACCGGAGCAGGGCATCCAGCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: PLHQRPVGQEGP*VWRPEQGIQLS Trigger: GCTGAGCTGGATGCCCTGCTCCGGTCGCCAGACCCACGGCCCTTCCTGGCCGACTGGGCGCTGGTGGAGCGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000615526.1 |
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| CDS GCA 72 bp | GGTGCACCGGCTGAGTGCAGCTGTGGCCCCAGGCTCTaGCGCAGCTCCCTGGAGAGCAAGCCGCACCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: GAPAECSCGPRL*RSSLESKPHPW Trigger: CCAGGGGTGCGGCTTGCTCTCCAGGGAGCTGCGGCAGAGCCTGGGGCCACAGCTGCACTCAGCCGGTGCACC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615526.1 |
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| CDS GCA 72 bp | GCAGCCACGGGGATGACGCCACACTGGGCGCACTCCTaGTGTGTCCGCGGGTCCAGCAGCCTGAAGCGCAAC | + |
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Preference number: 6 (lower is better) Translates to: AATGMTPHWAHS*CVRGSSSLKRN Trigger: GTTGCGCTTCAGGCTGCTGGACCCGCGGACACAGCAGGAGTGCGCCCAGTGTGGCGTCATCCCCGTGGCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000615526.1 |
||
| CDS CCA 72 bp | TCGAAGGTGCAGGCAGCCACGGGGATGACGCCACACTaGGCGCACTCCTGCTGTGTCCGCGGGTCCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SKVQAATGMTPH*AHSCCVRGSSS Trigger: GCTGCTGGACCCGCGGACACAGCAGGAGTGCGCCCAGTGTGGCGTCATCCCCGTGGCTGCCTGCACCTTCGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000615526.1 |
||
| CDS CCA 72 bp | GAGCCCAGTGCTGAGCCGAGTCTGACCCTCTGTCCGTaGGTGCACCGGCTGAGTGCAGCTGTGGCCCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: EPSAEPSLTLCP*VHRLSAAVAPG Trigger: GCCTGGGGCCACAGCTGCACTCAGCCGGTGCACCCACGGACAGAGGGTCAGACTCGGCTCAGCACTGGGCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615526.1 |
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| CDS CCA 72 bp | GGAGCAGCCCTCCTCCCACGCTGTGGGCCCTCGCTGTaGACCCGGGATCCTGTCCCTGGTGAGCTCATGGAC | + |
|
Preference number: 6 (lower is better) Translates to: GAALLPRCGPSL*TRDPVPGELMD Trigger: GTCCATGAGCTCACCAGGGACAGGATCCCGGGTCCACAGCGAGGGCCCACAGCGTGGGAGGAGGGCTGCTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615526.1 |
||
| CDS CCA 72 bp | AGCTGGAACAAGGCGCTAGGCAGCACCAGCGGGTTCTaGTCGCCCAGGGCCAGGTGCTTGGGCAGGACCTCG | + |
|
Preference number: 6 (lower is better) Translates to: SWNKALGSTSGF*SPRARCLGRTS Trigger: CGAGGTCCTGCCCAAGCACCTGGCCCTGGGCGACCAGAACCCGCTGGTGCTGCCTAGCGCCTTGTTCCAGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000615526.1 |
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| CDS CCA 72 bp | GGCGACCGGAGCAGGGCATCCAGCTCAGCACGGCCATaGTCGAGCTGTTCCAACAGGTCCCCGAGCAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GDRSRASSSARP*SSCSNRSPSSR Trigger: CCTGCTGCTCGGGGACCTGTTGGAACAGCTCGACCATGGCCGTGCTGAGCTGGATGCCCTGCTCCGGTCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000615526.1 |
||
| CDS CCA 72 bp | AGCCGGTCATCGGGCAGCATGGGGCATCTGGGTGCCTaGCCTGCGGCCGAGCTCCCTGCAATCAGCATCTCG | + |
|
Preference number: 6 (lower is better) Translates to: SRSSGSMGHLGA*PAAELPAISIS Trigger: CGAGATGCTGATTGCAGGGAGCTCGGCCGCAGGCCAGGCACCCAGATGCCCCATGCTGCCCGATGACCGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611891.1 |
||
| CDS CCA 72 bp | GGCACAGAGACAGGCCTCACCAAAGACGAGGCCAGCTaGCTGGTCAGCATGGGAGGAGGGCGCCCAGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GTETGLTKDEAS*LVSMGGGRPGL Trigger: CAGGCCTGGGCGCCCTCCTCCCATGCTGACCAGCCAGCTGGCCTCGTCTTTGGTGAGGCCTGTCTCTGTGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615526.1 |
||
| CDS CCA 72 bp | GACATTCGCGGGCCATCCTCCCGCTCCGGTTCTCCCTaGGGACGCTCCACGCCTCACCGCAGTTGTAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: DIRGPSSRSGSP*GRSTPHRSCRA Trigger: TGCCCTACAACTGCGGTGAGGCGTGGAGCGTCCCCAGGGAGAACCGGAGCGGGAGGATGGCCCGCGAATGTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615526.1 |
||
| CDS TCA 72 bp | ATGGTGACGAACCAGCGCAGCCGGGCCCAGTCCTGGTaGGCCGCCGACGCCTTTCGGTCAAACACGACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: MVTNQRSRAQSW*AADAFRSNTTG Trigger: GCCTGTCGTGTTTGACCGAAAGGCGTCGGCGGCTCACCAGGACTGGGCCCGGCTGCGCTGGTTCGTCACCAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000615526.1 |
||
| CDS GCA 72 bp | AGCAGCTGCATGCGGGCGTGGTGGCGCTTGAGCAGGTaGGGACTCAGGTCCGAGGTCAGGAACTCACGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSCMRAWWRLSR*GLRSEVRNSRR Trigger: CCTGCGTGAGTTCCTGACCTCGGACCTGAGTCCGCACCTGCTCAAGCGCCACCACGCCCGCATGCAGCTGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000611891.1 ENST00000615526.1 |
||
| CDS GCA 72 bp | CAGAAGCCGGTCATCGGGCAGCATGGGGCATCTGGGTaGCTGGCCTGCGGCCGAGCTCCCTGCAATCAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: QKPVIGQHGASG*LACGRAPCNQH Trigger: ATGCTGATTGCAGGGAGCTCGGCCGCAGGCCAGGCACCCAGATGCCCCATGCTGCCCGATGACCGGCTTCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611891.1 |
||
| CDS GCA 72 bp | GCAGCTCCCTGGAGAGCAAGCCGCACCCCTGGTTGCTaGCCCGGCTCCCAGCAACCCTGGAGATCTCAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: AAPWRASRTPGC*PGSQQPWRSQV Trigger: AACCTGAGATCTCCAGGGTTGCTGGGAGCCGGGGCAGCAACCAGGGGTGCGGCTTGCTCTCCAGGGAGCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615526.1 |
||
| CDS CCA 72 bp | ACAGCAGCGCTTCTCCGTGGAACCCCCACTTCTCCGTaGGCACGGGCGGCTGTTGGACTGTGGTGCCCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: TAALLRGTPTSP*ARAAVGLWCPW Trigger: CCAAGGGCACCACAGTCCAACAGCCGCCCGTGCCCACGGAGAAGTGGGGGTTCCACGGAGAAGCGCTGCTGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611891.1 |
||
| CDS CCA 72 bp | GCATTGACTGACTCAGAAGCCGGTCATCGGGCAGCATaGGGCATCTGGGTGCCTGGCCTGCGGCCGAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ALTDSEAGHRAA*GIWVPGLRPSS Trigger: GGAGCTCGGCCGCAGGCCAGGCACCCAGATGCCCCATGCTGCCCGATGACCGGCTTCTGAGTCAGTCAATGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611891.1 |
||
| CDS TCA 72 bp | GGGCGCACTCCTGCTGTGTCCGCGGGTCCAGCAGCCTaGAGCGCAACTCATACTGCTCCGATGTGGCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GRTPAVSAGPAA*SATHTAPMWLA Trigger: AGCCAGCCACATCGGAGCAGTATGAGTTGCGCTTCAGGCTGCTGGACCCGCGGACACAGCAGGAGTGCGCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000615526.1 |
||
| CDS TCA 72 bp | CCAGAGAGGCTGGTCGTGAACCCGGAAAGGTGGTTCTaGGCCCCTCGCTGCTTCCTACACGCCCCGGTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: PERLVVNPERWF*APRCFLHAPVP Trigger: TGGGACCGGGGCGTGTAGGAAGCAGCGAGGGGCTCAGAACCACCTTTCCGGGTTCACGACCAGCCTCTCTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615526.1 |
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| CDS CCA 72 bp | CAACCACTGCAGGTGCTGAACAGCAGCGCTTCTCCGTaGAACCCCCACTTCTCCGTGGGCACGGGCGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: QPLQVLNSSASP*NPHFSVGTGGC Trigger: ACAGCCGCCCGTGCCCACGGAGAAGTGGGGGTTCCACGGAGAAGCGCTGCTGTTCAGCACCTGCAGTGGTTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611891.1 |
||
| CDS CCA 72 bp | CGCACCCCTGGTTGCTGCCCCGGCTCCCAGCAACCCTaGAGATCTCAGGTTGTCACAGCCACTTGGGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RTPGCCPGSQQP*RSQVVTATWAL Trigger: CAAGGCCCAAGTGGCTGTGACAACCTGAGATCTCCAGGGTTGCTGGGAGCCGGGGCAGCAACCAGGGGTGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615526.1 |
||
| CDS TCA 72 bp | ACTTACGCAGCAGCTGCATGCGGGCGTGGTGGCGCTTaGGCAGGTGCGGACTCAGGTCCGAGGTCAGGAACT | + |
|
Preference number: 6 (lower is better) Translates to: TYAAAACGRGGA*AGADSGPRSGT Trigger: AGTTCCTGACCTCGGACCTGAGTCCGCACCTGCTCAAGCGCCACCACGCCCGCATGCAGCTGCTGCGTAAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000611891.1 ENST00000615526.1 |
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| CDS TCA 72 bp | GCAACTCATACTGCTCCGATGTGGCTGGCTGGATGGTaGCGAACCAGCGCAGCCGGGCCCAGTCCTGGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: ATHTAPMWLAGW*RTSAAGPSPGE Trigger: CTCACCAGGACTGGGCCCGGCTGCGCTGGTTCGTCACCATCCAGCCAGCCACATCGGAGCAGTATGAGTTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000615526.1 |
||
| CDS CCA 72 bp | GGCATTGCGGCGCTCGGTGTAGGTCTTCCACGCCTCTaGTTCCAGCAGCTGCTGGTCATCTGCCTCCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GIAALGVGLPRL*FQQLLVICLLL Trigger: CAGGAGGAGGCAGATGACCAGCAGCTGCTGGAACCAGAGGCGTGGAAGACCTACACCGAGCGCCGCAATGCC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000611891.1 ENST00000615526.1 |
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| CDS CCA 72 bp | GCACCAGCGGGTTCTGGTCGCCCAGGGCCAGGTGCTTaGGCAGGACCTCGATGTAGTAGGAGCACTTACGCA | + |
|
Preference number: 6 (lower is better) Translates to: APAGSGRPGPGA*AGPRCSRSTYA Trigger: TGCGTAAGTGCTCCTACTACATCGAGGTCCTGCCCAAGCACCTGGCCCTGGGCGACCAGAACCCGCTGGTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000615526.1 |
||
| CDS CCA 72 bp | CTGAAGCGCAACTCATACTGCTCCGATGTGGCTGGCTaGATGGTGACGAACCAGCGCAGCCGGGCCCAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LKRNSYCSDVAG*MVTNQRSRAQS Trigger: GGACTGGGCCCGGCTGCGCTGGTTCGTCACCATCCAGCCAGCCACATCGGAGCAGTATGAGTTGCGCTTCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000615526.1 |
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| CDS CCA 72 bp | CAGCCTGAAGCGCAACTCATACTGCTCCGATGTGGCTaGCTGGATGGTGACGAACCAGCGCAGCCGGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: QPEAQLILLRCG*LDGDEPAQPGP Trigger: TGGGCCCGGCTGCGCTGGTTCGTCACCATCCAGCCAGCCACATCGGAGCAGTATGAGTTGCGCTTCAGGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000615526.1 |
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| CDS CAA 90 bp | GCAGCCTCCACTTCCCCGCAGTGGCCTTTGGGTATGGCCTGGGCATaGACTGACTCAGAAGCCGGTCATCGGGCAGCATGGGGCATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: AASTSPQWPLGMAWA*TDSEAGHRAAWGIW Trigger: CCAGATGCCCCATGCTGCCCGATGACCGGCTTCTGAGTCAGTCAATGCCCAGGCCATACCCAAAGGCCACTGCGGGGAAGTGGAGGCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000611891.1 |
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| CDS CAA 90 bp | GCCTCCTCCTGGTCCAGGAAGGACTGGGGATTGCCCAGCTTCATCTaGTCCAGGCCCAGGCCTGCCACATGGGTGCTCATTATCCGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ASSWSRKDWGLPSFI*SRPRPATWVLIIRE Trigger: CTCCCGGATAATGAGCACCCATGTGGCAGGCCTGGGCCTGGACAAGATGAAGCTGGGCAATCCCCAGTCCTTCCTGGACCAGGAGGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000611891.1 ENST00000615526.1 |
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| CDS TCA 72 bp | CTTCCCCGCAGTGGCCTTTGGGTATGGCCTGGGCATTaGCTGACTCAGAAGCCGGTCATCGGGCAGCATGGG | + |
|
Preference number: 6 (lower is better) Translates to: LPRSGLWVWPGH*LTQKPVIGQHG Trigger: CCCATGCTGCCCGATGACCGGCTTCTGAGTCAGTCAATGCCCAGGCCATACCCAAAGGCCACTGCGGGGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611891.1 |
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| CDS GCA 72 bp | GACTCAGGTCCGAGGTCAGGAACTCACGCAGGGCATTaGGGCGCTCGGTGTAGGTCTTCCACGCCTCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: DSGPRSGTHAGH*GARCRSSTPLV Trigger: AACCAGAGGCGTGGAAGACCTACACCGAGCGCCGCAATGCCCTGCGTGAGTTCCTGACCTCGGACCTGAGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000611891.1 ENST00000615526.1 |
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| CDS GCA 72 bp | GTCCGCGGGTCCAGCAGCCTGAAGCGCAACTCATACTaGTCCGATGTGGCTGGCTGGATGGTGACGAACCAG | + |
|
Preference number: 6 (lower is better) Translates to: VRGSSSLKRNSY*SDVAGWMVTNQ Trigger: CTGGTTCGTCACCATCCAGCCAGCCACATCGGAGCAGTATGAGTTGCGCTTCAGGCTGCTGGACCCGCGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000615526.1 |
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| CDS CCA 72 bp | GGGACAGGACAGGGAAGAACTAGGACTGCGGACTTCTaGCCAGAACCGCCTGACCTGTGGCCTTGCAAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GTGQGRTRTADF*PEPPDLWPCKG Trigger: GCCCTTGCAAGGCCACAGGTCAGGCGGTTCTGGCCAGAAGTCCGCAGTCCTAGTTCTTCCCTGTCCTGTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615526.1 |
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| CDS GCA 72 bp | CCCCGAGCAGCAGGAGCTGGATCTTGGTCTGAGCTGTaGCCACCTTCTTCATGCGCTGGAACTTCCAGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: PRAAGAGSWSEL*PPSSCAGTSRG Trigger: ACCCCTGGAAGTTCCAGCGCATGAAGAAGGTGGGCACAGCTCAGACCAAGATCCAGCTCCTGCTGCTCGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000615526.1 |
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| CDS CCA 72 bp | TGCTGGTCATCTGCCTCCTCCTGGTCCAGGAAGGACTaGGGATTGCCCAGCTTCATCTTGTCCAGGCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: CWSSASSWSRKD*GLPSFILSRPR Trigger: CCTGGGCCTGGACAAGATGAAGCTGGGCAATCCCCAGTCCTTCCTGGACCAGGAGGAGGCAGATGACCAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000611891.1 ENST00000615526.1 |
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| CDS CAA 72 bp | ACTTCCCCGCAGTGGCCTTTGGGTATGGCCTGGGCATaGACTGACTCAGAAGCCGGTCATCGGGCAGCATGG | + |
|
Preference number: 6 (lower is better) Translates to: TSPQWPLGMAWA*TDSEAGHRAAW Trigger: CCATGCTGCCCGATGACCGGCTTCTGAGTCAGTCAATGCCCAGGCCATACCCAAAGGCCACTGCGGGGAAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611891.1 |
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| CDS TCA 72 bp | GTCATATCTGCCCGGGAAGGGTTGCCCTTTTGGGCGTaGGGCAGATATGACTTCACGAGCGCACTCCTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: VISAREGLPFWA*GRYDFTSALLG Trigger: CCCGAGGAGTGCGCTCGTGAAGTCATATCTGCCTCACGCCCAAAAGGGCAACCCTTCCCGGGCAGATATGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615526.1 |
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| CDS CCA 72 bp | TTCTTCATGCGCTGGAACTTCCAGGGGTCGATGAGCTaGAACAAGGCGCTAGGCAGCACCAGCGGGTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: FFMRWNFQGSMS*NKALGSTSGFW Trigger: CCAGAACCCGCTGGTGCTGCCTAGCGCCTTGTTCCAGCTCATCGACCCCTGGAAGTTCCAGCGCATGAAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000615526.1 |
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| CDS CCA 72 bp | GTTCCAACAGGTCCCCGAGCAGCAGGAGCTGGATCTTaGTCTGAGCTGTGCCCACCTTCTTCATGCGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: VPTGPRAAGAGS*SELCPPSSCAG Trigger: TCCAGCGCATGAAGAAGGTGGGCACAGCTCAGACCAAGATCCAGCTCCTGCTGCTCGGGGACCTGTTGGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000615526.1 |
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| CDS CAA 72 bp | TGGTCCAGGAAGGACTGGGGATTGCCCAGCTTCATCTaGTCCAGGCCCAGGCCTGCCACATGGGTGCTCATT | + |
|
Preference number: 6 (lower is better) Translates to: WSRKDWGLPSFI*SRPRPATWVLI Trigger: AATGAGCACCCATGTGGCAGGCCTGGGCCTGGACAAGATGAAGCTGGGCAATCCCCAGTCCTTCCTGGACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000611891.1 ENST00000615526.1 |
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| CDS CAA 72 bp | GCCGCCGACGCCTTTCGGTCAAACACGACAGGCATCTaGGTGCTCAGCATGAGCCAGATGTGCGGGATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: AADAFRSNTTGI*VLSMSQMCGIL Trigger: CAAGATCCCGCACATCTGGCTCATGCTGAGCACCAAGATGCCTGTCGTGTTTGACCGAAAGGCGTCGGCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370097.2 ENST00000370098.4 ENST00000615526.1 |
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| CDS TCA 72 bp | TTCACCGCTGGAGGGAAACCGTGCCTCTGTGACGTGTaGGGGATGTTTTCTAGTCTCCAGCAGCTGCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: FTAGGKPCLCDV*GMFSSLQQLPR Trigger: CCTGGGCAGCTGCTGGAGACTAGAAAACATCCCTCACACGTCACAGAGGCACGGTTTCCCTCCAGCGGTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615526.1 |
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| CDS CCA 72 bp | CGCTGTGGACCCGGGATCCTGTCCCTGGTGAGCTCATaGACTCCACAAGTGACACTCCATTTCCCAGATGGA | + |
|
Preference number: 6 (lower is better) Translates to: RCGPGILSLVSS*TPQVTLHFPDG Trigger: TCCATCTGGGAAATGGAGTGTCACTTGTGGAGTCCATGAGCTCACCAGGGACAGGATCCCGGGTCCACAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615526.1 |
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| CDS GCA 72 bp | GTGACGTGTGAGGGATGTTTTCTAGTCTCCAGCAGCTaGCCAGGTGGAACACCCAGAGAGGCTGGTCGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: VTCEGCFLVSSS*PGGTPREAGRE Trigger: TTCACGACCAGCCTCTCTGGGTGTTCCACCTGGGCAGCTGCTGGAGACTAGAAAACATCCCTCACACGTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615526.1 |
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| CDS CAA 72 bp | CCCTGGAGATCTCAGGTTGTCACAGCCACTTGGGCCTaGGACGACCCACAAATGAGAGCTAAGCAGTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PWRSQVVTATWA*DDPQMRAKQLL Trigger: CAGCAACTGCTTAGCTCTCATTTGTGGGTCGTCCAAGGCCCAAGTGGCTGTGACAACCTGAGATCTCCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615526.1 |
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| CDS CAA 90 bp | ACAGCCACTTGGGCCTTGGACGACCCACAAATGAGAGCTAAGCAGTaGCTGAGTTCCCCAGGGCCACACAGGTACGTGGTGAAGTCATAT | + |
|
Preference number: 6 (lower is better) Translates to: TATWALDDPQMRAKQ*LSSPGPHRYVVKSY Trigger: ATATGACTTCACCACGTACCTGTGTGGCCCTGGGGAACTCAGCAACTGCTTAGCTCTCATTTGTGGGTCGTCCAAGGCCCAAGTGGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615526.1 |
||
| CDS GCA 72 bp | AGGTACGTGGTGAAGTCATATCTGCCCGGGAAGGGTTaGCCTTTTGGGCGTGAGGCAGATATGACTTCACGA | + |
|
Preference number: 6 (lower is better) Translates to: RYVVKSYLPGKG*PFGREADMTSR Trigger: TCGTGAAGTCATATCTGCCTCACGCCCAAAAGGGCAACCCTTCCCGGGCAGATATGACTTCACCACGTACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615526.1 |
||
| CDS CCA 72 bp | AAGCAGGCAATTTTTCACCTGAGTGCAGCTCAGGCTTaGCAACCACTGCAGGTGCTGAACAGCAGCGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: KQAIFHLSAAQA*QPLQVLNSSAS Trigger: AGAAGCGCTGCTGTTCAGCACCTGCAGTGGTTGCCAAGCCTGAGCTGCACTCAGGTGAAAAATTGCCTGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611891.1 |
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| CDS CAA 90 bp | ACAAGTGACACTCCATTTCCCAGATGGAGCCTGAGGCTAAGAAGCTaGGTTCTTGTTCTCATCCAGGGCTTGAGCCCAGTGCTGAGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: TSDTPFPRWSLRLRS*VLVLIQGLSPVLSR Trigger: TCGGCTCAGCACTGGGCTCAAGCCCTGGATGAGAACAAGAACCAAGCTTCTTAGCCTCAGGCTCCATCTGGGAAATGGAGTGTCACTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615526.1 |
||
| CDS CAA 72 bp | ACTCCATTTCCCAGATGGAGCCTGAGGCTAAGAAGCTaGGTTCTTGTTCTCATCCAGGGCTTGAGCCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: TPFPRWSLRLRS*VLVLIQGLSPV Trigger: CACTGGGCTCAAGCCCTGGATGAGAACAAGAACCAAGCTTCTTAGCCTCAGGCTCCATCTGGGAAATGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615526.1 |
||
| CDS GCA 72 bp | AGAATTTACTGCAGAGGCCGGAGGCTCGGCACCTGGTaGAGGGTTAATGATGTTAAAATATCTGGCCAACAC | + |
|
Preference number: 6 (lower is better) Translates to: RIYCRGRRLGTW*RVNDVKISGQH Trigger: GTGTTGGCCAGATATTTTAACATCATTAACCCTGCACCAGGTGCCGAGCCTCCGGCCTCTGCAGTAAATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611891.1 |
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| CDS CCA 72 bp | CTCAGAATTTACTGCAGAGGCCGGAGGCTCGGCACCTaGTGCAGGGTTAATGATGTTAAAATATCTGGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: LRIYCRGRRLGT*CRVNDVKISGQ Trigger: TTGGCCAGATATTTTAACATCATTAACCCTGCACCAGGTGCCGAGCCTCCGGCCTCTGCAGTAAATTCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611891.1 |
||
| CDS CCA 72 bp | CTCATGGACTCCACAAGTGACACTCCATTTCCCAGATaGAGCCTGAGGCTAAGAAGCTTGGTTCTTGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: LMDSTSDTPFPR*SLRLRSLVLVL Trigger: GAGAACAAGAACCAAGCTTCTTAGCCTCAGGCTCCATCTGGGAAATGGAGTGTCACTTGTGGAGTCCATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615526.1 |
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