RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FNDC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000164694

Ensembl transcript IDs: ENST00000297267.14, ENST00000329629.8, ENST00000480856.1

Found 769 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTaGAGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTG +
Preference number: 1 (lower is better)
Translates to: FHEARTACICYSWKY*SVRISCLKSLEITL
Trigger: CAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACTTCAGTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
3UTR-3UTR CCA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTACTAGTGCGACTTAGTTaGTGGGGCTGGGCAGGGCAA +
Preference number: 2 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLLVRLS*WGWAGQ
Trigger: TTGCCCTGCCCAGCCCCACCAACTAAGTCGCACTAG...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
3UTR-3UTR CCA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCCTTAGTTGGTGGGGCTaGGCAGGGCAAGCTTGCAGC +
Preference number: 2 (lower is better)
Translates to: NRKHVAFHEARTACICYSLSWWG*AGQACS
Trigger: GCTGCAAGCTTGCCCTGCCCAGCCCCACCAACTAAG...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
3UTR-3UTR CCA 90 bp CATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACGTGCGACTTAGTTGGTaGGGCTGGGCAGGGCAAGCT +
Preference number: 2 (lower is better)
Translates to: HVAFHEARTACICYSWKYVRLSW*GWAGQA
Trigger: AGCTTGCCCTGCCCAGCCCCACCAACTAAGTCGCAC...GTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
3UTR-3UTR TCA 90 bp CATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACGCCAGTGTCCATCTATaGCCTTCCTGGCACCTAGGG +
Preference number: 2 (lower is better)
Translates to: HVAFHEARTACICYSWKYASVHL*PSWHLG
Trigger: CCCTAGGTGCCAGGAAGGTCATAGATGGACACTGGC...GTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
3UTR-3UTR GCA 90 bp AGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTGAAGTGTCCGAATTTCCACGCTGGCTGTCTTTaGTCACAGCCCCTAGTGCGA +
Preference number: 2 (lower is better)
Translates to: SKNSVHMLFLEILKCPNFHAGCL*SQPLVR
Trigger: TCGCACTAGGGGCTGTGAGCAAAGACAGCCAGCGTG...GAAATTCGGACACTTCAGTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
3UTR-3UTR CCA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTGTGCGACTTAGTTGGTaGGGCTGGGCAGGGCAAGCT +
Preference number: 2 (lower is better)
Translates to: VRISCLKSLEITLNQLLVVRLSW*GWAGQA
Trigger: AGCTTGCCCTGCCCAGCCCCACCAACTAAGTCGCAC...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
3UTR-3UTR CCA 90 bp GAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTGCTATTACCTAGTGCGACTTAGTTaGTGGGGCTGGGCAGGGCAA +
Preference number: 2 (lower is better)
Translates to: EITLNQLLVSDVSGMCYYLVRLS*WGWAGQ
Trigger: TTGCCCTGCCCAGCCCCACCAACTAAGTCGCACTAG...GTAATAGCACATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
3UTR-3UTR TCA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCAGTTCCAGACTGAGATaGCCAGAATGGCCAGTGTCC +
Preference number: 2 (lower is better)
Translates to: EKNRKHVAFHEARTACICSSRLR*PEWPVS
Trigger: GGACACTGGCCATTCTGGTCATCTCAGTCTGGAACT...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
3UTR-3UTR TCA 90 bp AGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTGAAGTGTCCGAATTTCTCAGTTGCTGGTTTCTaGTGTCTCTGGGATGTGCTA +
Preference number: 2 (lower is better)
Translates to: SKNSVHMLFLEILKCPNFSVAGF*CLWDVL
Trigger: TAGCACATCCCAGAGACATCAGAAACCAGCAACTGA...GAAATTCGGACACTTCAGTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
3UTR-3UTR TCA 90 bp AGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTGAAGTGTCCGAATTTCGTCTGGAAATCACACTaGATCAGTTGCTGGTTTCTG +
Preference number: 2 (lower is better)
Translates to: SKNSVHMLFLEILKCPNFVWKSH*ISCWFL
Trigger: CAGAAACCAGCAACTGATTCAGTGTGATTTCCAGAC...GAAATTCGGACACTTCAGTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
3UTR CAA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTaGCTGGTTTCTGATGTCTCTGGGATGTGCTATTACAAACAAACA +
Preference number: 2 (lower is better)
Translates to: VRISCLKSLEITLNQ*LVSDVSGMCYYKQT
Trigger: TGTTTGTTTGTAATAGCACATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
3UTR CCA 72 bp GGCTGTCTTTGCTCACAGCCCCTAGTGCGACTTAGTTaGTGGGGCTGGGCAGGGCAAGCTTGCAGCATGACG +
Preference number: 3 (lower is better)
Translates to: GCLCSQPLVRLS*WGWAGQACSMT
Trigger: CGTCATGCTGCAAGCTTGCCCTGCCCAGCCCCACCAACTAAGTCGCACTAGGGGCTGTGAGCAAAGACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
3UTR CCA 72 bp TGTCTTTGCTCACAGCCCCTAGTGCGACTTAGTTGGTaGGGCTGGGCAGGGCAAGCTTGCAGCATGACGGTC +
Preference number: 3 (lower is better)
Translates to: CLCSQPLVRLSW*GWAGQACSMTV
Trigger: GACCGTCATGCTGCAAGCTTGCCCTGCCCAGCCCCACCAACTAAGTCGCACTAGGGGCTGTGAGCAAAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
3UTR TCA 72 bp CCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATaGCCAGAATGGCCAGTGTCCATCTATGACCTTCCT +
Preference number: 3 (lower is better)
Translates to: PGQEVGLSSRLR*PEWPVSIYDLP
Trigger: AGGAAGGTCATAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
3UTR-3UTR CAA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCCTGGGCAGGGCAAGCTaGCAGCATGACGGTCCTGTG +
Preference number: 3 (lower is better)
Translates to: NRKHVAFHEARTACICYSLGRAS*QHDGPV
Trigger: CACAGGACCGTCATGCTGCAAGCTTGCCCTGCCCAG...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
3UTR-3UTR CAA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGCACGCTGGCTGTCTTaGCTCACAGCCCCTAGTGCG +
Preference number: 3 (lower is better)
Translates to: SVRISCLKSLEITLNQLLARWLS*LTAPSA
Trigger: CGCACTAGGGGCTGTGAGCAAAGACAGCCAGCGTGC...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
3UTR-3UTR CAA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTGCACGCTGGCTGTCTTaGCTCACAGCCCCTAGTGCG +
Preference number: 3 (lower is better)
Translates to: VRISCLKSLEITLNQLLVARWLS*LTAPSA
Trigger: CGCACTAGGGGCTGTGAGCAAAGACAGCCAGCGTGC...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
3UTR TCA 72 bp GCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTaGAGTGTCCGAATTTCATGCCTAAAAAGTCTGGAA +
Preference number: 3 (lower is better)
Translates to: ARTACICYSWKY*SVRISCLKSLE
Trigger: TTCCAGACTTTTTAGGCATGAAATTCGGACACTTCAGTATTTCCAGGAATAGCATATGCACGCTGTTCTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCGCGCGTGGTGTACTaGGGCCAGGGGTGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLARVVY*GQGWVP
Trigger: GGGCACCCACCCCTGGCCGCAGTACACCACGCGCGC...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGTCTGCGGCCCCTGAATaGGGGGTCCTCCGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLSAAPE*GVLRAG
Trigger: GCCGGCCCGGAGGACCCCCCATTCAGGGGCCGCAGA...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTGGGGAGCTGGAGGGCTaGAGCCGAGGTCCCCGCCCA +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFGELEG*SRGPRP
Trigger: TGGGCGGGGACCTCGGCTGCAGCCCTCCAGCTCCCC...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTACGGGAGGAGGGGGCTaGTGTTGTGGGGCCCGGCCG +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFTGGGG*CCGARP
Trigger: CGGCCGGGCCCCACAACAGCAGCCCCCTCCTCCCGT...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp CTTTGCTCACAGCCCCTAGTGCGACTTAGTTGGTGGGGCTGGGCAGGGCAAGCTGGGAAGGGACGCAGCTaGCTCCTTGGCGCGCGCGGC +
Preference number: 4 (lower is better)
Translates to: LCSQPLVRLSWWGWAGQAGKGRS*LLGARG
Trigger: GCCGCGCGCGCCAAGGAGGCAGCTGCGTCCCTTCCC...AGCTTGCCCTGCCCAGCCCCACCAACTAAGTCGCACTAGGGGCTGTGAGCAAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTCGACTTCCCCGGCGCTaGCCTGCTGGGTACCCGGGC +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFRLPRR*PAGYPG
Trigger: GCCCGGGTACCCAGCAGGGCAGCGCCGGGGAAGTCG...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGAAGGCGCCCTTGGGGTaGAGGGAGCCCACAGCGCGC +
Preference number: 4 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLKAPLG*REPTAR
Trigger: GCGCGCTGTGGGCTCCCTCCACCCCAAGGGCGCCTT...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGCAGGTGGGGCGCGCGTaGTGTACTGCGGCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLQVGRA*CTAARG
Trigger: ACCCCTGGCCGCAGTACACCACGCGCGCCCCACCTG...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CTTTGCTCACAGCCCCTAGTGCGACTTAGTTGGTGGGGCTGGGCAGGGCAAGCTTGGTCGTGCGGCGGGTaGTGGTCGTGCGGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: LCSQPLVRLSWWGWAGQAWSCGG*WSCGGW
Trigger: CCACCCGCCGCACGACCACCACCCGCCGCACGACCA...AGCTTGCCCTGCCCAGCCCCACCAACTAAGTCGCACTAGGGGCTGTGAGCAAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp CTTTGCTCACAGCCCCTAGTGCGACTTAGTTGGTGGGGCTGGGCAGGGCAAGCTGCCGTCCGTCTGTTCTaGGCGCTCTGCGCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: LCSQPLVRLSWWGWAGQAAVRLF*ALCAVP
Trigger: GGGCACCGCGCAGAGCGCGCAGAACAGACGGACGGC...AGCTTGCCCTGCCCAGCCCCACCAACTAAGTCGCACTAGGGGCTGTGAGCAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297267.14
CDS-3UTR GCA 90 bp CTTTGCTCACAGCCCCTAGTGCGACTTAGTTGGTGGGGCTGGGCAGGGCAAGCTTGGGGTCCCGGGTGGTaGTGGGACGTGGCGACGGGA +
Preference number: 4 (lower is better)
Translates to: LCSQPLVRLSWWGWAGQAWGPGW*WDVATG
Trigger: TCCCGTCGCCACGTCCCAGCACCACCCGGGACCCCA...AGCTTGCCCTGCCCAGCCCCACCAACTAAGTCGCACTAGGGGCTGTGAGCAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTAAGGCGCCCTTGGGGTaGAGGGAGCCCACAGCGCGC +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFKAPLG*REPTAR
Trigger: GCGCGCTGTGGGCTCCCTCCACCCCAAGGGCGCCTT...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGCCCAGCCCCGGGAGATaGGCTGCCTGGAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLPSPGR*AAWRRK
Trigger: CTTCCTCCTCCAGGCAGCCCATCTCCCGGGGCTGGG...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTGGTCCCGGGTGGTGCTaGGACGTGGCGACGGGAGGA +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFGPGWC*DVATGG
Trigger: TCCTCCCGTCGCCACGTCCCAGCACCACCCGGGACC...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTGGGTCCGAGGAGGAGTaGGAGCGGCCCTGCGACGTG +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFGSEEE*ERPCDV
Trigger: CACGTCGCAGGGCCGCTCCCACTCCTCCTCGGACCC...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTTGGTCGTGCGGCGGGTaGTGGCAGTGGTGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFWSCGG*WQWWAS
Trigger: CGAGGCCCACCACTGCCACCACCCGCCGCACGACCA...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGGCTTTGCGCCGGGGTaGACAGAGCTTCTGTCGCGG +
Preference number: 4 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLGFAPG*TELLSR
Trigger: CCGCGACAGAAGCTCTGTGCACCCCGGCGCAAAGCC...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTCGGCGAGGCTGGCTTTaGGCCGGGGTGCACAGAGCT +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFRRGWL*AGVHRA
Trigger: AGCTCTGTGCACCCCGGCGCAAAGCCAGCCTCGCCG...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGTCCCATCGGCGTCTTTaGCGCCCCTGGGAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLSHRRL*RPWEWR
Trigger: CCTCCACTCCCAGGGGCGGCAAAGACGCCGATGGGA...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp CTTTGCTCACAGCCCCTAGTGCGACTTAGTTGGTGGGGCTGGGCAGGGCAAGCTTCACGGTGGCAGCGCTaGGAGGCGGCAGTCGGGAAG +
Preference number: 4 (lower is better)
Translates to: LCSQPLVRLSWWGWAGQASRWQR*EAAVGK
Trigger: CTTCCCGACTGCCGCCTCGCAGCGCTGCCACCGTGA...AGCTTGCCCTGCCCAGCCCCACCAACTAAGTCGCACTAGGGGCTGTGAGCAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CTTTGCTCACAGCCCCTAGTGCGACTTAGTTGGTGGGGCTGGGCAGGGCAAGCTGAGAGGTGCCCTGGGTaGACGCGTGGTGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: LCSQPLVRLSWWGWAGQAERCPG*TRGGQE
Trigger: CTCCTGCCCACCACGCGTCCACCCAGGGCACCTCTC...AGCTTGCCCTGCCCAGCCCCACCAACTAAGTCGCACTAGGGGCTGTGAGCAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGCGTCTTTGCCGCCCCTaGGAGTGGAGGAAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLRLCRP*EWRKRA
Trigger: GGCCCTCTTCCTCCACTCCCAGGGGCGGCAAAGACG...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGTTGTTGGACGCCTGGTaGTCGTGCGGCGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLLLDAW*SCGGWW
Trigger: CCACCACCCGCCGCACGACCACCAGGCGTCCAACAA...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGGGTGGGAATCAGAGTaGGAGGGAACCCTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLGWESE*EGTLGW
Trigger: CCACCCCAGGGTTCCCTCTCACTCTGATTCCCACCC...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGCTTGGCTTCAGTGGGTaGTCAACTGAGGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLLGFSG*STEAAA
Trigger: GGCGGCGGCCTCAGTTGACCACCCACTGAAGCCAAG...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297267.14
CDS-3UTR CCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTTCGACTGTGGGGAGCTaGAGGGCTGCAGCCGAGGTC +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFSTVGS*RAAAEV
Trigger: GACCTCGGCTGCAGCCCTCCAGCTCCCCACAGTCGA...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGGGAGATGGGCTGCCTaGAGGAGGAAGGCACGTGGT +
Preference number: 4 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLGRWAA*RRKARG
Trigger: ACCACGTGCCTTCCTCCTCCAGGCAGCCCATCTCCC...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTGGTTCTGGAGGGCCGTaGGGAGCATCCCTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFGSGGP*GASLWS
Trigger: GCTCCAGAGGGATGCTCCCCACGGCCCTCCAGAACC...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTTTGTTGGACGCCTGGTaGTCGTGCGGCGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFLLDAW*SCGGWW
Trigger: CCACCACCCGCCGCACGACCACCAGGCGTCCAACAA...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTGGACAGCCTGTCATCTaGGGACCGGACACGCACACG +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFGQPVI*GPDTHT
Trigger: CGTGTGCGTGTCCGGTCCTCAGATGACAGGCTGTCC...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTGGAGCAACCACCGAGTaGCCGTGTCTACTTGGCGGC +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFGATTE*PCLLGG
Trigger: GCCGCCAAGTAGACACGGCCACTCGGTGGTTGCTCC...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTGTGGGGCTGAGGCACTaGAATCTTCCTCTGCGGCCC +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFVGLRH*NLPLRP
Trigger: GGGCCGCAGAGGAAGATTCCAGTGCCTCAGCCCCAC...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGATGGCGCATTGGAGTTaGTGGCTGGGGCGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLMAHWS*WLGRPH
Trigger: GTGAGGACGCCCCAGCCACCAACTCCAATGCGCCAT...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTTCCTCGTCCTGGTTCTaGAGGGCCGTGGGGAGCATC +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFSSSWF*RAVGSI
Trigger: GATGCTCCCCACGGCCCTCCAGAACCAGGACGAGGA...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGGAGACTCCACCTGCTaGTGCTTGGGAAGGGACGCA +
Preference number: 4 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLGDSTC*CLGRDA
Trigger: TGCGTCCCTTCCCAAGCACCAGCAGGTGGAGTCTCC...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CTTTGCTCACAGCCCCTAGTGCGACTTAGTTGGTGGGGCTGGGCAGGGCAAGCTACAGCATCGGGGTGGTaGAGAAGTGGCCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LCSQPLVRLSWWGWAGQATASGW*RSGQVG
Trigger: CCCCACCTGGCCACTTCTCCACCACCCCGATGCTGT...AGCTTGCCCTGCCCAGCCCCACCAACTAAGTCGCACTAGGGGCTGTGAGCAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGTCGGACTGTGGTTGTTaGACGCCTGGTGGTCGTGCG +
Preference number: 4 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLSDCGC*TPGGRA
Trigger: CGCACGACCACCAGGCGTCCAACAACCACAGTCCGA...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp CTTTGCTCACAGCCCCTAGTGCGACTTAGTTGGTGGGGCTGGGCAGGGCAAGCTAAGGACGATGAGAGGTaGCCTGGGTGGACGCGTGGT +
Preference number: 4 (lower is better)
Translates to: LCSQPLVRLSWWGWAGQAKDDER*PGWTRG
Trigger: ACCACGCGTCCACCCAGGGCACCTCTCATCGTCCTT...AGCTTGCCCTGCCCAGCCCCACCAACTAAGTCGCACTAGGGGCTGTGAGCAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTAGGCTGGCCCCTCTCTaGGGGCTTCTCCTTAAGTCC +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFRLAPL*GLLLKS
Trigger: GGACTTAAGGAGAAGCCCGCAGAGAGGGGCCAGCCT...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTCCTCTGCCTTCTTaGCGCGAAGCTGGGGTTTTC +
Preference number: 4 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLAPLPS*REAGVF
Trigger: GAAAACCCCAGCTTCGCGCCAAGAAGGCAGAGGAGC...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTGTGGCCGTGTCTACTTaGCGGCCTCAGGGTCCGTTT +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFVAVST*RPQGPF
Trigger: AAACGGACCCTGAGGCCGCCAAGTAGACACGGCCAC...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CTTTGCTCACAGCCCCTAGTGCGACTTAGTTGGTGGGGCTGGGCAGGGCAAGCTTCAGGTGTGGCTGGGTaGGCAGCAGCCGAGATGATC +
Preference number: 4 (lower is better)
Translates to: LCSQPLVRLSWWGWAGQASGVAG*AAAEMI
Trigger: GATCATCTCGGCTGCTGCCCACCCAGCCACACCTGA...AGCTTGCCCTGCCCAGCCCCACCAACTAAGTCGCACTAGGGGCTGTGAGCAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGTGGGGTTCTCTGGGATaGGTTCCTTCCGATGCAGGC +
Preference number: 4 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLWGSLG*VPSDAG
Trigger: GCCTGCATCGGAAGGAACCCATCCCAGAGAACCCCA...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CTTTGCTCACAGCCCCTAGTGCGACTTAGTTGGTGGGGCTGGGCAGGGCAAGCTTGGGGAGCATCCCTCTaGAGCTCGCCGTGTAAGGGT +
Preference number: 4 (lower is better)
Translates to: LCSQPLVRLSWWGWAGQAWGASL*SSPCKG
Trigger: ACCCTTACACGGCGAGCTCCAGAGGGATGCTCCCCA...AGCTTGCCCTGCCCAGCCCCACCAACTAAGTCGCACTAGGGGCTGTGAGCAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTCAGGTGGGGCGCGCGTaGTGTACTGCGGCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASQVGRA*CTAARG
Trigger: ACCCCTGGCCGCAGTACACCACGCGCGCCCCACCTG...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGGGGTGGTGGAGAAGTaGCCAGGTGGGGCGCGCGTG +
Preference number: 4 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASGVVEK*PGGARV
Trigger: CACGCGCGCCCCACCTGGCCACTTCTCCACCACCCC...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGTGGTCGAAGGCTCAGTaGTGGTTGGTGGCCTTGACG +
Preference number: 4 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLWSKAQ*WLVALT
Trigger: CGTCAAGGCCACCAACCACCACTGAGCCTTCGACCA...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTGGACATGGTGGACCGTaGTGGCGCATTGGAGTTGGT +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFGHGGP*WRIGVG
Trigger: ACCAACTCCAATGCGCCATCACGGTCCACCATGTCC...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGAGGAGTACTTGCCCTaGGGATGTGTATCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLEEYLP*GCVSAP
Trigger: AGGGGCAGATACACATCCTCAGGGCAAGTACTCCTC...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTACCGACCCGCGTCTCTaGTCTGGGGTCCCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASTDPRL*SGVPGG
Trigger: ACCACCCGGGACCCCAGAGCAGAGACGCGGGTCGGT...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTACGACTTCCCCGGCGCTaGCCTGCTGGGTACCCGGGC +
Preference number: 4 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLRLPRR*PAGYPG
Trigger: GCCCGGGTACCCAGCAGGGCAGCGCCGGGGAAGTCG...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTCACGCTGGCTGTCTTTaGTCACAGCCCCTAGTGCGA +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFHAGCL*SQPLVR
Trigger: TCGCACTAGGGGCTGTGAGCAAAGACAGCCAGCGTG...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGATTGGAGTTGGTGGCTaGGGCGTCCTCACCATCCTT +
Preference number: 4 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLIGVGG*GVLTIL
Trigger: AAGGATGGTGAGGACGCCCCAGCCACCAACTCCAAT...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGAATGCTGAACCTGCTTaGAGACCTCCCGTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLNAEPA*RPPVGS
Trigger: GCTGCCAACGGGAGGTCTCCAAGCAGGTTCAGCATT...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTGCGGTCTGTGGACCCTaGCTGTGCTTTGGGAGAATG +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFAVCGP*LCFGRM
Trigger: CATTCTCCCAAAGCACAGCCAGGGTCCACAGACCGC...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CTTTGCTCACAGCCCCTAGTGCGACTTAGTTGGTGGGGCTGGGCAGGGCAAGCTGCATGCATCATCCTCTaGCGCAAGGACAGCATCGGG +
Preference number: 4 (lower is better)
Translates to: LCSQPLVRLSWWGWAGQAACIIL*RKDSIG
Trigger: CCCGATGCTGTCCTTGCGCCAGAGGATGATGCATGC...AGCTTGCCCTGCCCAGCCCCACCAACTAAGTCGCACTAGGGGCTGTGAGCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGGCAGGGAAGGACGATaGGAGGTGCCCTGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASGREGR*EVPWVD
Trigger: GTCCACCCAGGGCACCTCTCATCGTCCTTCCCTGCC...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGTCTCCATGGATACCTaGGCTAAGCTTAGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLVSMDT*AKLRVG
Trigger: TCCCACCCTAAGCTTAGCTCAGGTATCCATGGAGAC...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp CTTTGCTCACAGCCCCTAGTGCGACTTAGTTGGTGGGGCTGGGCAGGGCAAGCTGAAAACCCCGTGATCTaGGTGGACTCTTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LCSQPLVRLSWWGWAGQAENPVI*VDSWLQ
Trigger: CTGGAGCCAAGAGTCCACGCAGATCACGGGGTTTTC...AGCTTGCCCTGCCCAGCCCCACCAACTAAGTCGCACTAGGGGCTGTGAGCAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTCCGTGTCCGCGTCTGTaGTCTGTTGAACATCCTGAG +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFPCPRL*SVEHPE
Trigger: CTCAGGATGTTCAACAGAGCACAGACGCGGACACGG...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTGTAGTAGTGGTGGGCTaGATGGTAGTGGTAGGGGGA +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFVVVVG*MVVVGG
Trigger: TCCCCCTACCACTACCATGCAGCCCACCACTACTAC...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGGACTTTGCTCCAAATaGTTTGAGAGCCGGGGCGTA +
Preference number: 4 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLGLCSK*FESRGV
Trigger: TACGCCCCGGCTCTCAAACCATTTGGAGCAAAGTCC...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297267.14
CDS-3UTR CCA 90 bp CTTTGCTCACAGCCCCTAGTGCGACTTAGTTGGTGGGGCTGGGCAGGGCAAGCTCTCAGGGTCCGTTTCTaGTCTTGGGTGTCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: LCSQPLVRLSWWGWAGQALRVRF*SWVSEG
Trigger: ACCCTCAGACACCCAAGACCAGAAACGGACCCTGAG...AGCTTGCCCTGCCCAGCCCCACCAACTAAGTCGCACTAGGGGCTGTGAGCAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGCAGAGACCTGCGTCCTaGACGAGAGATGAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLQRPAS*TRDEKR
Trigger: TCTCTTCTCATCTCTCGTCCAGGACGCAGGTCTCTG...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTCTATCGCCGTCACCGTaGCTTTCACCATCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFLSPSP*LSPSEA
Trigger: GGCTTCTGATGGTGAAAGCCACGGTGACGGCGATAG...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTGAGGAGGAAGGCACGTaGTCATTGACAACGGTGGCA +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFEEEGT*SLTTVA
Trigger: TGCCACCGTTGTCAATGACCACGTGCCTTCCTCCTC...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGTGTATCTGCCCCTGTaGATTTGGGGTTCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLVYLPL*IWGSLG
Trigger: TCCCAGAGAACCCCAAATCCACAGGGGCAGATACAC...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTGAACATCCTGAGCCTTaGAGGCCAGGGAGGAGTACT +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFEHPEP*RPGRST
Trigger: AGTACTCCTCCCTGGCCTCCAAGGCTCAGGATGTTC...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTCGGGTGTCATCCTTCTaGGAACACTGGGATGCTGCT +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFRVSSF*EHWDAA
Trigger: AGCAGCATCCCAGTGTTCCCAGAAGGATGACACCCG...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTTCGAAGGCTCAGTGGTaGTTGGTGGCCTTGACGTCT +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFSKAQW*LVALTS
Trigger: AGACGTCAAGGCCACCAACCACCACTGAGCCTTCGA...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTACCACTTTCCAGGGATaGAGACCCCACACTCGTACC +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFTTFQG*RPHTRT
Trigger: GGTACGAGTGTGGGGTCTCCATCCCTGGAAAGTGGT...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp CTTTGCTCACAGCCCCTAGTGCGACTTAGTTGGTGGGGCTGGGCAGGGCAAGCTGCTCCTCCTCCCCAGTaGTTTCTGTCGACTGAAGAT +
Preference number: 4 (lower is better)
Translates to: LCSQPLVRLSWWGWAGQAAPPPQ*FLSTED
Trigger: ATCTTCAGTCGACAGAAATCACTGGGGAGGAGGAGC...AGCTTGCCCTGCCCAGCCCCACCAACTAAGTCGCACTAGGGGCTGTGAGCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCCCGCCCAATGCTaGACCTGCTTGGAGACCTCC +
Preference number: 4 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASVPAQC*TCLETS
Trigger: GGAGGTCTCCAAGCAGGTTCAGCATTGGGCGGGGAC...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTGTCTCCATGGATACCTaGGCTAAGCTTAGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFVSMDT*AKLRVG
Trigger: TCCCACCCTAAGCTTAGCTCAGGTATCCATGGAGAC...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTAGTTCCAGACTGAGATaGCCAGAATGGCCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFSSRLR*PEWPVS
Trigger: GGACACTGGCCATTCTGGTCATCTCAGTCTGGAACT...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTCCCTCACTGCAGTCCTaGCGGGAGCAACCACCGAGT +
Preference number: 4 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASPSLQS*REQPPS
Trigger: ACTCGGTGGTTGCTCCCGGCAGGACTGCAGTGAGGG...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGGAACACTGGGATGCTaGTGTGACCGTGCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASGTLGC*CDRAAG
Trigger: GCCCGCAGCACGGTCACAGCAGCATCCCAGTGTTCC...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTCTCTTCCGTAGGTACTaGAGTGTCAGTCTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFLFRRY*SVSLQA
Trigger: GGCTTGGAGACTGACACTGCAGTACCTACGGAAGAG...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGTTGGAAGTGATCCAGTaGATCAGTCAGAGAGCACGG +
Preference number: 4 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLLEVIQ*ISQRAR
Trigger: CCGTGCTCTCTGACTGATGCACTGGATCACTTCCAA...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTGGTAGCATCTTTGGGTaGGTCCCACGTGACTTTCAG +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFGSIFG*VPRDFQ
Trigger: CTGAAAGTCACGTGGGACCCACCCAAAGATGCTACC...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGGCAGCCCTGTAGACTaGTTGGCTCCGGCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASGSPVD*LAPALR
Trigger: TCTCAGGGCCGGAGCCAACCAGTCTACAGGGCTGCC...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTGTCCGTTTCTGGTCTTaGGTGTCTGAGGGTGACATG +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFVRFWS*VSEGDM
Trigger: CATGTCACCCTCAGACACCCAAGACCAGAAACGGAC...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp ACAGCAAAACTGAATCCTGTTCATTGTCCAGGCCAAGAAGTGGGACTGAGTTCCCCTTCGGGGCAGCGCTaGCATCCGGGCCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: TAKLNPVHCPGQEVGLSSPSGQR*HPGPHC
Trigger: GCAGTGAGGGCCCGGATGCCAGCGCTGCCCCGAAGG...GGAACTCAGTCCCACTTCTTGGCCTGGACAATGAACAGGATTCAGTTTTGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTACTGGGCGGGGCTGCGTaGCCAGGGAAAAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLLGGAA*PGKSQA
Trigger: AGCCTGGCTTTTCCCTGGCCACGCAGCCCCGCCCAG...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTACCCTGGGTGGACGCGTaGTGGGCAGGAGAGGCCGAA +
Preference number: 4 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLPWVDA*WAGEAE
Trigger: TTCGGCCTCTCCTGCCCACCACGCGTCCACCCAGGG...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CTTTGCTCACAGCCCCTAGTGCGACTTAGTTGGTGGGGCTGGGCAGGGCAAGCTCGTTGTCATTCAAGCTaGCAGGCAGGGAAGGACGAT +
Preference number: 4 (lower is better)
Translates to: LCSQPLVRLSWWGWAGQARCHSS*QAGKDD
Trigger: ATCGTCCTTCCCTGCCTGCCAGCTTGAATGACAACG...AGCTTGCCCTGCCCAGCCCCACCAACTAAGTCGCACTAGGGGCTGTGAGCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CTTTGCTCACAGCCCCTAGTGCGACTTAGTTGGTGGGGCTGGGCAGGGCAAGCTCGAGATGATCCCCCATaGGGTGGAGAAAGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: LCSQPLVRLSWWGWAGQARDDPP*GGESLE
Trigger: CTCAAGACTTTCTCCACCCCATGGGGGATCATCTCG...AGCTTGCCCTGCCCAGCCCCACCAACTAAGTCGCACTAGGGGCTGTGAGCAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp ACAGCAAAACTGAATCCTGTTCATTGTCCAGGCCAAGAAGTGGGACTGAGTTCCGGTCCCGGGTGGTGCTaGGACGTGGCGACGGGAGGA +
Preference number: 4 (lower is better)
Translates to: TAKLNPVHCPGQEVGLSSGPGWC*DVATGG
Trigger: TCCTCCCGTCGCCACGTCCCAGCACCACCCGGGACC...GGAACTCAGTCCCACTTCTTGGCCTGGACAATGAACAGGATTCAGTTTTGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp ACAGCAAAACTGAATCCTGTTCATTGTCCAGGCCAAGAAGTGGGACTGAGTTCCCCCGCGTCTCTGCTCTaGGGTCCCGGGTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: TAKLNPVHCPGQEVGLSSPASLL*GPGWCW
Trigger: CCAGCACCACCCGGGACCCCAGAGCAGAGACGCGGG...GGAACTCAGTCCCACTTCTTGGCCTGGACAATGAACAGGATTCAGTTTTGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTCCACCTGCTGGTGCTTaGGAAGGGACGCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASPPAGA*EGTQLP
Trigger: AGGCAGCTGCGTCCCTTCCCAAGCACCAGCAGGTGG...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTAGCCGCATGTCCGCGCTaGGACCTGTGGTCGCCACCT +
Preference number: 4 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLAACPR*DLWSPP
Trigger: AGGTGGCGACCACAGGTCCCAGCGCGGACATGCGGC...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTGGAAGAGGGCCACTTTaGCACAGAGGAAGACAGAAG +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFGRGPL*HRGRQK
Trigger: CTTCTGTCTTCCTCTGTGCCAAAGTGGCCCTCTTCC...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTGAGGGTTACGGAATCTaGCATGCATCATCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFEGYGI*HASSSG
Trigger: GCCAGAGGATGATGCATGCCAGATTCCGTAACCCTC...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTGCTTATCTTGGGCATTaGCCAGAGGTGTGCCATGTC +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFAYLGH*PEVCHV
Trigger: GACATGGCACACCTCTGGCCAATGCCCAAGATAAGC...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTTTGTGGCCCGGATTTTaGAAAGATAGCGTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFLWPGF*KDSVPQ
Trigger: CTGGGGAACGCTATCTTTTCAAAATCCGGGCCACAA...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000297267.14
CDS-3UTR TCA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTAGGGCAGCAGCCGAGATaGTCCCCCATGGGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLGQQPR*SPMGWR
Trigger: TCTCCACCCCATGGGGGATCATCTCGGCTGCTGCCC...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp CTTTGCTCACAGCCCCTAGTGCGACTTAGTTGGTGGGGCTGGGCAGGGCAAGCTGTCAGTCTCCAAGCCTaGGAACTCATCTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LCSQPLVRLSWWGWAGQAVSLQA*ELIFFS
Trigger: GCTGAAGAAGATGAGTTCTCAGGCTTGGAGACTGAC...AGCTTGCCCTGCCCAGCCCCACCAACTAAGTCGCACTAGGGGCTGTGAGCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTGTCAGTCTCCAAGCCTaGGAACTCATCTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFVSLQA*ELIFFS
Trigger: GCTGAAGAAGATGAGTTCTCAGGCTTGGAGACTGAC...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGATTATCTGATTCGGTaGCAAATGAGACCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLDYLIR*QMRPKG
Trigger: GCCCTTCGGTCTCATTTGTCACCGAATCAGATAATC...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTAGCATGACGGTCCTGTaGTTACCACTTTCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFSMTVL*LPLSRD
Trigger: ATCCCTGGAAAGTGGTAATCACAGGACCGTCATGCT...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCATGTAGCATTCCATaGAGCAAGAACAGCGTGCAT +
Preference number: 4 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLACSIP*SKNSVH
Trigger: ATGCACGCTGTTCTTGCTTCATGGAATGCTACATGC...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp CTTTGCTCACAGCCCCTAGTGCGACTTAGTTGGTGGGGCTGGGCAGGGCAAGCTTTGTCCTCCGTGTTCTaGTCAACATCCGCCTTACTG +
Preference number: 4 (lower is better)
Translates to: LCSQPLVRLSWWGWAGQALSSVF*STSALL
Trigger: CAGTAAGGCGGATGTTGAGCAGAACACGGAGGACAA...AGCTTGCCCTGCCCAGCCCCACCAACTAAGTCGCACTAGGGGCTGTGAGCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp ACAGCAAAACTGAATCCTGTTCATTGTCCAGGCCAAGAAGTGGGACTGAGTTCCCCCCGGGAGATGGGCTaGCTGGAGGAGGAAGGCACG +
Preference number: 4 (lower is better)
Translates to: TAKLNPVHCPGQEVGLSSPREMG*LEEEGT
Trigger: CGTGCCTTCCTCCTCCAGGCAGCCCATCTCCCGGGG...GGAACTCAGTCCCACTTCTTGGCCTGGACAATGAACAGGATTCAGTTTTGCTGT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTATGGGTTCCTTCCGATaGAGGCTGGCCCCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASMGSFR*RLAPLC
Trigger: GCAGAGAGGGGCCAGCCTGCATCGGAAGGAACCCAT...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp CTTTGCTCACAGCCCCTAGTGCGACTTAGTTGGTGGGGCTGGGCAGGGCAAGCTTTACGGAATCTGGCATaGATCATCCTCTGGCGCAAG +
Preference number: 4 (lower is better)
Translates to: LCSQPLVRLSWWGWAGQALRNLA*IILWRK
Trigger: CTTGCGCCAGAGGATGATGCATGCCAGATTCCGTAA...AGCTTGCCCTGCCCAGCCCCACCAACTAAGTCGCACTAGGGGCTGTGAGCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTGCTTATAATCCCACCTaGCCAATTCCCCCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFAYNPT*PIPPSL
Trigger: GAGAGAAGGGGGAATTGGCCAGGTGGGATTATAAGC...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CTTTGCTCACAGCCCCTAGTGCGACTTAGTTGGTGGGGCTGGGCAGGGCAAGCTCGCCTTACTGGTTGTTaGCATAGCGACAATGAAGGC +
Preference number: 4 (lower is better)
Translates to: LCSQPLVRLSWWGWAGQARLTGC*HSDNEG
Trigger: GCCTTCATTGTCGCTATGCCAACAACCAGTAAGGCG...AGCTTGCCCTGCCCAGCCCCACCAACTAAGTCGCACTAGGGGCTGTGAGCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297267.14
CDS-3UTR CCA 90 bp CTTTGCTCACAGCCCCTAGTGCGACTTAGTTGGTGGGGCTGGGCAGGGCAAGCTCAAGAAGAAGGTCCTTaGCATTTCTCCCTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LCSQPLVRLSWWGWAGQAQEEGP*HFSLGE
Trigger: CTCCCCAAGGGAGAAATGCCAAGGACCTTCTTCTTG...AGCTTGCCCTGCCCAGCCCCACCAACTAAGTCGCACTAGGGGCTGTGAGCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp ACAGCAAAACTGAATCCTGTTCATTGTCCAGGCCAAGAAGTGGGACTGAGTTCCCCCTGGGTGGACGCGTaGTGGGCAGGAGAGGCCGAA +
Preference number: 4 (lower is better)
Translates to: TAKLNPVHCPGQEVGLSSPWVDA*WAGEAE
Trigger: TTCGGCCTCTCCTGCCCACCACGCGTCCACCCAGGG...GGAACTCAGTCCCACTTCTTGGCCTGGACAATGAACAGGATTCAGTTTTGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTACCTTCCGATGCAGGCTaGCCCCTCTCTGCGGGCTTC +
Preference number: 4 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLPSDAG*PLSAGF
Trigger: GAAGCCCGCAGAGAGGGGCCAGCCTGCATCGGAAGG...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTAAGTGAGAGCCTGGGCTaGGAAGGTGACCGACCCGCG +
Preference number: 4 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLSESLG*EGDRPA
Trigger: CGCGGGTCGGTCACCTTCCCAGCCCAGGCTCTCACT...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGGAGACTCCACCTGCTaGTGCTTGGGAAGGGACGCA +
Preference number: 4 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASGDSTC*CLGRDA
Trigger: TGCGTCCCTTCCCAAGCACCAGCAGGTGGAGTCTCC...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTAAGGCACGTGGTCATTaGCAACGGTGGCAGGAAGCG +
Preference number: 4 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASKARGH*QRWQEA
Trigger: CGCTTCCTGCCACCGTTGTCAATGACCACGTGCCTT...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTACTCGTCGTCCTCGGCTaGGACCGACTGCTGGGACTT +
Preference number: 4 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLLVVLG*DRLLGL
Trigger: AAGTCCCAGCAGTCGGTCTCAGCCGAGGACGACGAG...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGAAGAGGATTTCCATGTaGATCTTGGAGGTACCTTCC +
Preference number: 4 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLKRISM*ILEVPS
Trigger: GGAAGGTACCTCCAAGATTCACATGGAAATCCTCTT...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTGTTACTGATGAAGCTTaGGTGGACCACTTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFVTDEA*VDHLFL
Trigger: CAGGAACAAGTGGTCCACTCAAGCTTCATCAGTAAC...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp ACAGCAAAACTGAATCCTGTTCATTGTCCAGGCCAAGAAGTGGGACTGAGTTCCCTAGGGCAGCGGGGCTaGGCACGCTGGCTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: TAKLNPVHCPGQEVGLSSLGQRG*ARWLSL
Trigger: CAAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAG...GGAACTCAGTCCCACTTCTTGGCCTGGACAATGAACAGGATTCAGTTTTGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTTCAGTTGCTGGTTTCTaGTGTCTCTGGGATGTGCTA +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFSVAGF*CLWDVL
Trigger: TAGCACATCCCAGAGACATCAGAAACCAGCAACTGA...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTCTGACGTACTCCATTTaGCATCTCTTTCACCCTGTG +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFLTYSI*HLFHPV
Trigger: CACAGGGTGAAAGAGATGGCAAATGGAGTACGTCAG...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTACCCTCACTGCAGTCCTaGCGGGAGCAACCACCGAGT +
Preference number: 4 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLPSLQS*REQPPS
Trigger: ACTCGGTGGTTGCTCCCGGCAGGACTGCAGTGAGGG...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp ACAGCAAAACTGAATCCTGTTCATTGTCCAGGCCAAGAAGTGGGACTGAGTTCCCATCCGGGCCCTCACTaGAGTCCTGCCGGGAGCAAC +
Preference number: 4 (lower is better)
Translates to: TAKLNPVHCPGQEVGLSSHPGPH*SPAGSN
Trigger: GTTGCTCCCGGCAGGACTGCAGTGAGGGCCCGGATG...GGAACTCAGTCCCACTTCTTGGCCTGGACAATGAACAGGATTCAGTTTTGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp ACAGCAAAACTGAATCCTGTTCATTGTCCAGGCCAAGAAGTGGGACTGAGTTCCGGCTTTGCGCCGGGGTaGACAGAGCTTCTGTCGCGG +
Preference number: 4 (lower is better)
Translates to: TAKLNPVHCPGQEVGLSSGFAPG*TELLSR
Trigger: CCGCGACAGAAGCTCTGTGCACCCCGGCGCAAAGCC...GGAACTCAGTCCCACTTCTTGGCCTGGACAATGAACAGGATTCAGTTTTGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCGGGGAGCTGGAGGGCTaGAGCCGAGGTCCCCGCCCA +
Preference number: 4 (lower is better)
Translates to: NRKHVAFHEARTACICYSGELEG*SRGPRP
Trigger: TGGGCGGGGACCTCGGCTGCAGCCCTCCAGCTCCCC...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTGAAGTGTCCGAATTTCGGGAAGGGACGCAGCTaGCTCCTTGGCGCGCGCGGC +
Preference number: 4 (lower is better)
Translates to: SKNSVHMLFLEILKCPNFGKGRS*LLGARG
Trigger: GCCGCGCGCGCCAAGGAGGCAGCTGCGTCCCTTCCC...GAAATTCGGACACTTCAGTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCGCGCGCGTGGTGTACTaGGGCCAGGGGTGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: EKNRKHVAFHEARTACICARVVY*GQGWVP
Trigger: GGGCACCCACCCCTGGCCGCAGTACACCACGCGCGC...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTAGCTCATTATCAGGTTaGCATCATCGTCGTGCCGTT +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFSSLSG*HHRRAV
Trigger: AACGGCACGACGATGATGGCAACCTGATAATGAGCT...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp ACAGCAAAACTGAATCCTGTTCATTGTCCAGGCCAAGAAGTGGGACTGAGTTCCTGGGCATCCTCGTCCTaGTTCTGGAGGGCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: TAKLNPVHCPGQEVGLSSWASSS*FWRAVG
Trigger: CCCCACGGCCCTCCAGAACCAGGACGAGGATGCCCA...GGAACTCAGTCCCACTTCTTGGCCTGGACAATGAACAGGATTCAGTTTTGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTACCACCTGCTGGTGCTTaGGAAGGGACGCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLPPAGA*EGTQLP
Trigger: AGGCAGCTGCGTCCCTTCCCAAGCACCAGCAGGTGG...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTCGTGCGGCGGGTGGTaGCAGTGGTGGGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: NRKHVAFHEARTACICYSSCGGW*QWWASG
Trigger: CCCCGAGGCCCACCACTGCCACCACCCGCCGCACGA...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGATGTTTGAAAGCGAATaGGATCCAGATAGGCTCACC +
Preference number: 4 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLMFESE*DPDRLT
Trigger: GGTGAGCCTATCTGGATCCCATTCGCTTTCAAACAT...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTCACGGTGTACTGTCTTaGTGCAACAACTTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFHGVLS*CNNFLL
Trigger: CAGAAGAAAGTTGTTGCATCAAGACAGTACACCGTG...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTTGTTCTTTGGAAGACTaGCGTACTCCATTTGCCATC +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFCSLED*RTPFAI
Trigger: GATGGCAAATGGAGTACGTCAGTCTTCCAAAGAACA...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTACCCACTTTGTTCCTTaGGGGCCATTGATAATTCTC +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFTHFVP*GPLIIL
Trigger: GAGAATTATCAATGGCCCTCAAGGAACAAAGTGGGT...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTAATGGGTTCCTTCCGATaGAGGCTGGCCCCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLMGSFR*RLAPLC
Trigger: GCAGAGAGGGGCCAGCCTGCATCGGAAGGAACCCAT...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTACTGGGAACACTGGGATaGTGCTGTGACCGTGCTGCG +
Preference number: 4 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLLGTLG*CCDRAA
Trigger: CGCAGCACGGTCACAGCAGCATCCCAGTGTTCCCAG...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTACGGGAGGAGGGGGCTaGTGTTGTGGGGCCCGGCCG +
Preference number: 4 (lower is better)
Translates to: VRISCLKSLEITLNQLLVTGGGG*CCGARP
Trigger: CGGCCGGGCCCCACAACAGCAGCCCCCTCCTCCCGT...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGGGTCCCGGGTGGTaGTGGGACGTGGCGACGGGA +
Preference number: 4 (lower is better)
Translates to: NRKHVAFHEARTACICYSWGPGW*WDVATG
Trigger: TCCCGTCGCCACGTCCCAGCACCACCCGGGACCCCA...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTAGGGCCTCGACTTCTGTaGTGTCGTCGTCGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLGPRLL*CRRRSC
Trigger: GCAGCTACGACGACGACAGCACAGAAGTCGAGGCCC...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTGACGGTTTCATTAAATaGTCCTGGACCCTTAATGGG +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFDGFIK*SWTLNG
Trigger: CCCATTAAGGGTCCAGGACCATTTAATGAAACCGTC...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGGCCCTGAGAGTTCATaGACTGCAGGGAGACCACAT +
Preference number: 4 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASGPESS*TAGRPH
Trigger: ATGTGGTCTCCCTGCAGTCCATGAACTCTCAGGGCC...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp ACAGCAAAACTGAATCCTGTTCATTGTCCAGGCCAAGAAGTGGGACTGAGTTCCGGCAGCCCTGTAGACTaGTTGGCTCCGGCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: TAKLNPVHCPGQEVGLSSGSPVD*LAPALR
Trigger: TCTCAGGGCCGGAGCCAACCAGTCTACAGGGCTGCC...GGAACTCAGTCCCACTTCTTGGCCTGGACAATGAACAGGATTCAGTTTTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGATTCTGGTGTTCTTTaGAAGACTGACGTACTCCAT +
Preference number: 4 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLDSGVL*KTDVLH
Trigger: ATGGAGTACGTCAGTCTTCCAAAGAACACCAGAATC...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGCGGCCCCTGAATaGGGGGTCCTCCGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: VRISCLKSLEITLNQLLVSAAPE*GVLRAG
Trigger: GCCGGCCCGGAGGACCCCCCATTCAGGGGCCGCAGA...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTATTGGAGTTGGTGGCTaGGGCGTCCTCACCATCCTT +
Preference number: 4 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASIGVGG*GVLTIL
Trigger: AAGGATGGTGAGGACGCCCCAGCCACCAACTCCAAT...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTAACCGTGATGGCGCATTaGAGTTGGTGGCTGGGGCGT +
Preference number: 4 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLTVMAH*SWWLGR
Trigger: ACGCCCCAGCCACCAACTCCAATGCGCCATCACGGT...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTACCCTGGCTGTGCTTTaGGAGAATGACCCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASTLAVL*ENDPPC
Trigger: ACACGGAGGGTCATTCTCCCAAAGCACAGCCAGGGT...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGCGAGCAGGGGACGCGTaGCGGTCTGTGGACCCTGGC +
Preference number: 4 (lower is better)
Translates to: KSLEITLNQLLVSDVSGMRAGDA*RSVDPG
Trigger: GCCAGGGTCCACAGACCGCCACGCGTCCCCTGCTCG...CATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTGAAGTGTCCGAATTTCCGAGCAGGGGACGCGTaGCGGTCTGTGGACCCTGGC +
Preference number: 4 (lower is better)
Translates to: SKNSVHMLFLEILKCPNFRAGDA*RSVDPG
Trigger: GCCAGGGTCCACAGACCGCCACGCGTCCCCTGCTCG...GAAATTCGGACACTTCAGTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACGGTGGTGCTGGGACGTaGCGACGGGAGGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: HVAFHEARTACICYSWKYGGAGT*RREEGA
Trigger: AGCCCCCTCCTCCCGTCGCCACGTCCCAGCACCACC...GTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTGAAGTGTCCGAATTTCGGTGGTGCTGGGACGTaGCGACGGGAGGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: SKNSVHMLFLEILKCPNFGGAGT*RREEGA
Trigger: AGCCCCCTCCTCCCGTCGCCACGTCCCAGCACCACC...GAAATTCGGACACTTCAGTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCCTCTGGGGTCCCGGGTaGTGCTGGGACGTGGCGACG +
Preference number: 4 (lower is better)
Translates to: NRKHVAFHEARTACICYSLWGPG*CWDVAT
Trigger: CGTCGCCACGTCCCAGCACCACCCGGGACCCCAGAG...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCCTCTGGGGTCCCGGGTaGTGCTGGGACGTGGCGACG +
Preference number: 4 (lower is better)
Translates to: EKNRKHVAFHEARTACICLWGPG*CWDVAT
Trigger: CGTCGCCACGTCCCAGCACCACCCGGGACCCCAGAG...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTGAAGTGTCCGAATTTCGGGTCCGAGGAGGAGTaGGAGCGGCCCTGCGACGTG +
Preference number: 4 (lower is better)
Translates to: SKNSVHMLFLEILKCPNFGSEEE*ERPCDV
Trigger: CACGTCGCAGGGCCGCTCCCACTCCTCCTCGGACCC...GAAATTCGGACACTTCAGTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp ACAGCAAAACTGAATCCTGTTCATTGTCCAGGCCAAGAAGTGGGACTGAGTTCCGCTCCCTCTCTTCCTTaGCGAGGCTCCCATCGGCGT +
Preference number: 4 (lower is better)
Translates to: TAKLNPVHCPGQEVGLSSAPSLP*RGSHRR
Trigger: ACGCCGATGGGAGCCTCGCCAAGGAAGAGAGGGAGC...GGAACTCAGTCCCACTTCTTGGCCTGGACAATGAACAGGATTCAGTTTTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp ACAGCAAAACTGAATCCTGTTCATTGTCCAGGCCAAGAAGTGGGACTGAGTTCCGAGGGGCAAGCGCGATaGCAGGCTCCCTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: TAKLNPVHCPGQEVGLSSEGQAR*QAPSLP
Trigger: AGGAAGAGAGGGAGCCTGCCATCGCGCTTGCCCCTC...GGAACTCAGTCCCACTTCTTGGCCTGGACAATGAACAGGATTCAGTTTTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTGCTATTACGGGGTGGTGGAGAAGTaGCCAGGTGGGGCGCGCGTG +
Preference number: 4 (lower is better)
Translates to: EITLNQLLVSDVSGMCYYGVVEK*PGGARV
Trigger: CACGCGCGCCCCACCTGGCCACTTCTCCACCACCCC...GTAATAGCACATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp ACAGCAAAACTGAATCCTGTTCATTGTCCAGGCCAAGAAGTGGGACTGAGTTCCCCCCTGCCCAAAGAGTaGGAGGCCGTCAGGACTCAC +
Preference number: 4 (lower is better)
Translates to: TAKLNPVHCPGQEVGLSSPLPKE*EAVRTH
Trigger: GTGAGTCCTGACGGCCTCCCACTCTTTGGGCAGGGG...GGAACTCAGTCCCACTTCTTGGCCTGGACAATGAACAGGATTCAGTTTTGCTGT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGTCCAAGACTCAAAATTaGCTTATCTTGGGCATTGGC +
Preference number: 4 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLSKTQN*LILGIG
Trigger: GCCAATGCCCAAGATAAGCCAATTTTGAGTCTTGGA...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCGTGCGGCGGGTGGTaGCAGTGGTGGGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: VRISCLKSLEITLNQLLVSCGGW*QWWASG
Trigger: CCCCGAGGCCCACCACTGCCACCACCCGCCGCACGA...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGTCGTGCGGCGGGTaGTGGCAGTGGTGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: NRKHVAFHEARTACICYSWSCGG*WQWWAS
Trigger: CGAGGCCCACCACTGCCACCACCCGCCGCACGACCA...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTCCACATCTCCTGGGGTaGCTTTGTCCCAGTCCACAA +
Preference number: 4 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASPHLLG*LCPSPQ
Trigger: TTGTGGACTGGGACAAAGCCACCCCAGGAGATGTGG...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTTGTGACCACATCTCCTaGGGTGGCTTTGTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASCDHIS*GGFVPV
Trigger: GACTGGGACAAAGCCACCCCAGGAGATGTGGTCACA...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGCTCCTCCTCCCCAGTaGTTTCTGTCGACTGAAGAT +
Preference number: 4 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASAPPPQ*FLSTED
Trigger: ATCTTCAGTCGACAGAAATCACTGGGGAGGAGGAGC...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCACAATGACAAATaGGTGGCAACCTTCCACGGC +
Preference number: 4 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASVHNDK*VATFHG
Trigger: GCCGTGGAAGGTTGCCACTCATTTGTCATTGTGGAC...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCATACAAAGGGACCTaGAGCTTAAATTCAGTTAGT +
Preference number: 4 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLAYKGT*SLNSVS
Trigger: ACTAACTGAATTTAAGCTTCAGGTCCCTTTGTATGC...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp CATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACCGGCGAGGCTGGCTTTaGGCCGGGGTGCACAGAGCT +
Preference number: 4 (lower is better)
Translates to: HVAFHEARTACICYSWKYRRGWL*AGVHRA
Trigger: AGCTCTGTGCACCCCGGCGCAAAGCCAGCCTCGCCG...GTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTGAAGTGTCCGAATTTCGCCGTGGCCTCCGCCTaGCTTCCGCCGTCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: SKNSVHMLFLEILKCPNFAVASA*LPPSSL
Trigger: TAGGGAAGACGGCGGAAGGCAGGCGGAGGCCACGGC...GAAATTCGGACACTTCAGTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGGCCGTGGCCTCCGCCTaGCTTCCGCCGTCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: KSLEITLNQLLVSDVSGMAVASA*LPPSSL
Trigger: TAGGGAAGACGGCGGAAGGCAGGCGGAGGCCACGGC...CATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp GAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTGCTATTACCCCCGGGAGATGGGCTaGCTGGAGGAGGAAGGCACG +
Preference number: 4 (lower is better)
Translates to: EITLNQLLVSDVSGMCYYPREMG*LEEEGT
Trigger: CGTGCCTTCCTCCTCCAGGCAGCCCATCTCCCGGGG...GTAATAGCACATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCACCGACCCGCGTCTCTaGTCTGGGGTCCCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: EKNRKHVAFHEARTACICTDPRL*SGVPGG
Trigger: ACCACCCGGGACCCCAGAGCAGAGACGCGGGTCGGT...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCCCTGTGGTCGCCACCTaGCCCTGCGCCTGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: NRKHVAFHEARTACICYSPVVAT*PCACGR
Trigger: TCTCCCACAGGCGCAGGGGCAGGTGGCGACCACAGG...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTCACGGTGGCAGCGCTaGGAGGCGGCAGTCGGGAAG +
Preference number: 4 (lower is better)
Translates to: EKNRKHVAFHEARTACICSRWQR*EAAVGK
Trigger: CTTCCCGACTGCCGCCTCGCAGCGCTGCCACCGTGA...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTCCCAGCTGTCTCCAATaGTGTAGAATGTATCTTTCA +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFPSCLQ*CRMYLS
Trigger: TGAAAGATACATTCTACAGCATTGGAGACAGCTGGG...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTCGGCTCACTCCACTGTaGTTTTCTGCAGTAAGCAGC +
Preference number: 4 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASRLTPL*FSAVSS
Trigger: GCTGCTTACTGCAGAAAACCACAGTGGAGTGAGCCG...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTTTGGCATTTCTCCCTTaGGGAGAAGCAGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASLAFLP*GEAGTE
Trigger: CTCTGTGCCTGCTTCTCCCCAAGGGAGAAATGCCAA...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTCCTTCGGGGCAGCGCTaGCATCCGGGCCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: VRISCLKSLEITLNQLLVPSGQR*HPGPHC
Trigger: GCAGTGAGGGCCCGGATGCCAGCGCTGCCCCGAAGG...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCCTGGGCGGGGCTGCGTaGCCAGGGAAAAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: NRKHVAFHEARTACICYSLGGAA*PGKSQA
Trigger: AGCCTGGCTTTTCCCTGGCCACGCAGCCCCGCCCAG...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTCGAGATGATCCCCCATaGGGTGGAGAAAGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASRDDPP*GGESLE
Trigger: CTCAAGACTTTCTCCACCCCATGGGGGATCATCTCG...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTAAGACGGAGGAGGACATaGTGGACCGTGATGGCGCAT +
Preference number: 4 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLRRRRT*WTVMAH
Trigger: ATGCGCCATCACGGTCCACCATGTCCTCCTCCGTCT...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTGCTATTACGAGGGAACCCTGGGGTaGGCTCGGGAGGGCACAGTC +
Preference number: 4 (lower is better)
Translates to: EITLNQLLVSDVSGMCYYEGTLG*AREGTV
Trigger: GACTGTGCCCTCCCGAGCCCACCCCAGGGTTCCCTC...GTAATAGCACATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGCCCGCGTCTCTGCTCTaGGGTCCCGGGTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SVRISCLKSLEITLNQLLPASLL*GPGWCW
Trigger: CCAGCACCACCCGGGACCCCAGAGCAGAGACGCGGG...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTGAAGTGTCCGAATTTCGCCGCATGTCCGCGCTaGGACCTGTGGTCGCCACCT +
Preference number: 4 (lower is better)
Translates to: SKNSVHMLFLEILKCPNFAACPR*DLWSPP
Trigger: AGGTGGCGACCACAGGTCCCAGCGCGGACATGCGGC...GAAATTCGGACACTTCAGTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTGAAGTGTCCGAATTTCAGTCGGGAAGGGACGTaGGAGGCCCTGGGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SKNSVHMLFLEILKCPNFSREGT*EALGEL
Trigger: CAGCTCCCCCAGGGCCTCCCACGTCCCTTCCCGACT...GAAATTCGGACACTTCAGTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp ACAGCAAAACTGAATCCTGTTCATTGTCCAGGCCAAGAAGTGGGACTGAGTTCCAGGACAGCATCGGGGTaGTGGAGAAGTGGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: TAKLNPVHCPGQEVGLSSRTASG*WRSGQV
Trigger: CACCTGGCCACTTCTCCACCACCCCGATGCTGTCCT...GGAACTCAGTCCCACTTCTTGGCCTGGACAATGAACAGGATTCAGTTTTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTTGTCTCCAGGATAGGTaGGGGACTTTGCTCCAAATG +
Preference number: 4 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASCLQDR*GTLLQM
Trigger: CATTTGGAGCAAAGTCCCTCACCTATCCTGGAGACA...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297267.14
CDS-3UTR TCA 90 bp ACAGCAAAACTGAATCCTGTTCATTGTCCAGGCCAAGAAGTGGGACTGAGTTCCATGAAGGCTTTGGAGTaGGGTCCCAGGCCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: TAKLNPVHCPGQEVGLSSMKALE*GPRPLL
Trigger: CAGGAGAGGCCTGGGACCTCACTCCAAAGCCTTCAT...GGAACTCAGTCCCACTTCTTGGCCTGGACAATGAACAGGATTCAGTTTTGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297267.14
CDS-3UTR TCA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCGGCAGGGAAGGACGATaGGAGGTGCCCTGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: EKNRKHVAFHEARTACICGREGR*EVPWVD
Trigger: GTCCACCCAGGGCACCTCTCATCGTCCTTCCCTGCC...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTACTTCAGGAAAGGAACTaGTGGCGCCTTCCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLLQERN*WRLPLG
Trigger: TCCCAGAGGAAGGCGCCATCAGTTCCTTTCCTGAAG...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCCCACGGCCACCACGGTaGTGTTGCGGGGAGCATGCT +
Preference number: 4 (lower is better)
Translates to: EKNRKHVAFHEARTACICPRPPR*CCGEHA
Trigger: AGCATGCTCCCCGCAACATCACCGTGGTGGCCGTGG...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTAGGCAAGCTTGCAGCATaGCGGTCCTGTGATTACCAC +
Preference number: 4 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLGKLAA*RSCDYH
Trigger: GTGGTAATCACAGGACCGTCATGCTGCAAGCTTGCC...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp CATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACCATCCGGGCCCTCACTaGAGTCCTGCCGGGAGCAAC +
Preference number: 4 (lower is better)
Translates to: HVAFHEARTACICYSWKYHPGPH*SPAGSN
Trigger: GTTGCTCCCGGCAGGACTGCAGTGAGGGCCCGGATG...GTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTCCTGTGGTCGCCACCTaGCCCTGCGCCTGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: VRISCLKSLEITLNQLLVPVVAT*PCACGR
Trigger: TCTCCCACAGGCGCAGGGGCAGGTGGCGACCACAGG...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTGAAGTGTCCGAATTTCTCCCATCGGCGTCTTTaGCGCCCCTGGGAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SKNSVHMLFLEILKCPNFSHRRL*RPWEWR
Trigger: CCTCCACTCCCAGGGGCGGCAAAGACGCCGATGGGA...GAAATTCGGACACTTCAGTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTTTACGGAATCTGGCATaGATCATCCTCTGGCGCAAG +
Preference number: 4 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASLRNLA*IILWRK
Trigger: CTTGCGCCAGAGGATGATGCATGCCAGATTCCGTAA...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCGTGCCATGTCGCCCCTaGCCAAAGAGTGGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: NRKHVAFHEARTACICYSVPCRP*PKSGRP
Trigger: CGGCCTCCCACTCTTTGGGCAGGGGCGACATGGCAC...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGGTGCCATGTCGCCCCTaGCCAAAGAGTGGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: KSLEITLNQLLVSDVSGMVPCRP*PKSGRP
Trigger: CGGCCTCCCACTCTTTGGGCAGGGGCGACATGGCAC...CATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp CTTTGCTCACAGCCCCTAGTGCGACTTAGTTGGTGGGGCTGGGCAGGGCAAGCTGAAGTCTTCATAGGATaGACTGTAAACCAAGTAACC +
Preference number: 4 (lower is better)
Translates to: LCSQPLVRLSWWGWAGQAEVFIG*TVNQVT
Trigger: GGTTACTTGGTTTACAGTGCATCCTATGAAGACTTC...AGCTTGCCCTGCCCAGCCCCACCAACTAAGTCGCACTAGGGGCTGTGAGCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGAGAGGTGCCCTGGGTaGACGCGTGGTGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: SVRISCLKSLEITLNQLLERCPG*TRGGQE
Trigger: CTCCTGCCCACCACGCGTCCACCCAGGGCACCTCTC...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTCGACTGTGGGGAGCTaGAGGGCTGCAGCCGAGGTC +
Preference number: 4 (lower is better)
Translates to: HVAFHEARTACICYSWKYSTVGS*RAAAEV
Trigger: GACCTCGGCTGCAGCCCTCCAGCTCCCCACAGTCGA...GTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCGGGCACAGTCGACTGTaGGGAGCTGGAGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: NRKHVAFHEARTACICYSGHSRL*GAGGLQ
Trigger: CTGCAGCCCTCCAGCTCCCCACAGTCGACTGTGCCC...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCGGGCACAGTCGACTGTaGGGAGCTGGAGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: EKNRKHVAFHEARTACICGHSRL*GAGGLQ
Trigger: CTGCAGCCCTCCAGCTCCCCACAGTCGACTGTGCCC...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTGAGGGAACCCTGGGGTaGGCTCGGGAGGGCACAGTC +
Preference number: 4 (lower is better)
Translates to: VRISCLKSLEITLNQLLVEGTLG*AREGTV
Trigger: GACTGTGCCCTCCCGAGCCCACCCCAGGGTTCCCTC...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACAGTGAGAGGGAACCCTaGGGTGGGCTCGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: HVAFHEARTACICYSWKYSEREP*GGLGRA
Trigger: TGCCCTCCCGAGCCCACCCCAGGGTTCCCTCTCACT...GTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGCCCAGCCCCGGGAGATaGGCTGCCTGGAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: SVRISCLKSLEITLNQLLPSPGR*AAWRRK
Trigger: CTTCCTCCTCCAGGCAGCCCATCTCCCGGGGCTGGG...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCCCTTCCGATGCAGGCTaGCCCCTCTCTGCGGGCTTC +
Preference number: 4 (lower is better)
Translates to: EKNRKHVAFHEARTACICPSDAG*PLSAGF
Trigger: GAAGCCCGCAGAGAGGGGCCAGCCTGCATCGGAAGG...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTAGGGGGCTGCTGTTGTaGGGCCCGGCCGGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: VRISCLKSLEITLNQLLVRGLLL*GPAGCH
Trigger: ATGACACCCGGCCGGGCCCCACAACAGCAGCCCCCT...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGAGTGAGAGCCTGGGCTaGGAAGGTGACCGACCCGCG +
Preference number: 4 (lower is better)
Translates to: KSLEITLNQLLVSDVSGMSESLG*EGDRPA
Trigger: CGCGGGTCGGTCACCTTCCCAGCCCAGGCTCTCACT...CATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGGCATCCTCGTCCTaGTTCTGGAGGGCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: NRKHVAFHEARTACICYSWASSS*FWRAVG
Trigger: CCCCACGGCCCTCCAGAACCAGGACGAGGATGCCCA...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCGGGGCCCGCACATCCTaGGCCTCGACTTCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: EKNRKHVAFHEARTACICGARTS*ASTSVL
Trigger: CAGCACAGAAGTCGAGGCCCAGGATGTGCGGGCCCC...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTGCTATTACCTGCCCCTGCGCCTGTaGGAGACTCCACCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: EITLNQLLVSDVSGMCYYLPLRL*ETPPAG
Trigger: ACCAGCAGGTGGAGTCTCCCACAGGCGCAGGGGCAG...GTAATAGCACATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACCTGCCCCTGCGCCTGTaGGAGACTCCACCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: HVAFHEARTACICYSWKYLPLRL*ETPPAG
Trigger: ACCAGCAGGTGGAGTCTCCCACAGGCGCAGGGGCAG...GTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCCGTCTTTGCCGCCCCTaGGAGTGGAGGAAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: EKNRKHVAFHEARTACICRLCRP*EWRKRA
Trigger: GGCCCTCTTCCTCCACTCCCAGGGGCGGCAAAGACG...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTAGTCGGGAAGGGACGTaGGAGGCCCTGGGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: VRISCLKSLEITLNQLLVSREGT*EALGEL
Trigger: CAGCTCCCCCAGGGCCTCCCACGTCCCTTCCCGACT...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCGGAGAAGTGGCCAGGTaGGGCGCGCGTGGTGTACTG +
Preference number: 4 (lower is better)
Translates to: EKNRKHVAFHEARTACICGEVAR*GARGVL
Trigger: CAGTACACCACGCGCGCCCCACCTGGCCACTTCTCC...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGTTTCCCTTCTACATTTaGTCTGCCATTATAACCTTG +
Preference number: 4 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLFPFYI*SAIITL
Trigger: CAAGGTTATAATGGCAGACCAAATGTAGAAGGGAAA...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTGGTTGTTGGACGCCTaGTGGTCGTGCGGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: KSLEITLNQLLVSDVSGMWLLDA*WSCGGW
Trigger: CCACCCGCCGCACGACCACCAGGCGTCCAACAACCA...CATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGTTGTTGGACGCCTaGTGGTCGTGCGGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: NRKHVAFHEARTACICYSWLLDA*WSCGGW
Trigger: CCACCCGCCGCACGACCACCAGGCGTCCAACAACCA...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTACCACATCTCCTGGGGTaGCTTTGTCCCAGTCCACAA +
Preference number: 4 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLPHLLG*LCPSPQ
Trigger: TTGTGGACTGGGACAAAGCCACCCCAGGAGATGTGG...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCGGTTGGCTCCGGCCCTaGGAGTTCATGGACTGCAGG +
Preference number: 4 (lower is better)
Translates to: NRKHVAFHEARTACICYSGWLRP*EFMDCR
Trigger: CCTGCAGTCCATGAACTCTCAGGGCCGGAGCCAACC...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGGGCAGCAGCCGAGATaGTCCCCCATGGGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: SVRISCLKSLEITLNQLLGQQPR*SPMGWR
Trigger: TCTCCACCCCATGGGGGATCATCTCGGCTGCTGCCC...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTCAAAGGGTTTGTGTCTaGGCAAATGGAAGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASQRVCV*ANGSVQ
Trigger: CTGGACACTTCCATTTGCTCAGACACAAACCCTTTG...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCGGGTGGGAATCAGAGTaGGAGGGAACCCTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: NRKHVAFHEARTACICYSGWESE*EGTLGW
Trigger: CCACCCCAGGGTTCCCTCTCACTCTGATTCCCACCC...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp CATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACCTCGTCGTCCTCGGCTaGGACCGACTGCTGGGACTT +
Preference number: 4 (lower is better)
Translates to: HVAFHEARTACICYSWKYLVVLG*DRLLGL
Trigger: AAGTCCCAGCAGTCGGTCTCAGCCGAGGACGACGAG...GTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTTGTCCCAGTCCACAATaGCAAATGAGTGGCAACCTT +
Preference number: 4 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASCPSPQ*QMSGNL
Trigger: AAGGTTGCCACTCATTTGTCATTGTGGACTGGGACA...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTAAAACCAAGTAACCTGTaGCCACATCTCCTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLKPSNL*PHLLGW
Trigger: CCACCCCAGGAGATGTGGTCACAGGTTACTTGGTTT...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGCTAGGGCAGCGGGGCTaGGCACGCTGGCTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: SVRISCLKSLEITLNQLLLGQRG*ARWLSL
Trigger: CAAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAG...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTAAGTTCCAGACTGAGATaGCCAGAATGGCCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLSSRLR*PEWPVS
Trigger: GGACACTGGCCATTCTGGTCATCTCAGTCTGGAACT...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCGGAACACTGGGATGCTaGTGTGACCGTGCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: EKNRKHVAFHEARTACICGTLGC*CDRAAG
Trigger: GCCCGCAGCACGGTCACAGCAGCATCCCAGTGTTCC...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTACTCTTCCGTAGGTACTaGAGTGTCAGTCTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLLFRRY*SVSLQA
Trigger: GGCTTGGAGACTGACACTGCAGTACCTACGGAAGAG...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTATAATTCCTTTCTACTaGATACAAAGGGACCTGAAG +
Preference number: 4 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFIIPFY*IQRDLK
Trigger: CTTCAGGTCCCTTTGTATGCAGTAGAAAGGAATTAT...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTGAAGTGTCCGAATTTCGGCTCCAGACAGGCGTaGTGCCTTCCACGCAACGGA +
Preference number: 4 (lower is better)
Translates to: SKNSVHMLFLEILKCPNFGSRQA*CLPRNG
Trigger: TCCGTTGCGTGGAAGGCACCACGCCTGTCTGGAGCC...GAAATTCGGACACTTCAGTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CTTTGCTCACAGCCCCTAGTGCGACTTAGTTGGTGGGGCTGGGCAGGGCAAGCTTTCATCTCTTGTCAGTaGAACATAATTCATCTTCCG +
Preference number: 4 (lower is better)
Translates to: LCSQPLVRLSWWGWAGQAFISCQ*NIIHLP
Trigger: CGGAAGATGAATTATGTTCCACTGACAAGAGATGAA...AGCTTGCCCTGCCCAGCCCCACCAACTAAGTCGCACTAGGGGCTGTGAGCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTGCTATTACGGAGCAACCACCGAGTaGCCGTGTCTACTTGGCGGC +
Preference number: 4 (lower is better)
Translates to: EITLNQLLVSDVSGMCYYGATTE*PCLLGG
Trigger: GCCGCCAAGTAGACACGGCCACTCGGTGGTTGCTCC...GTAATAGCACATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGGTGGGGCTGAGGCACTaGAATCTTCCTCTGCGGCCC +
Preference number: 4 (lower is better)
Translates to: KSLEITLNQLLVSDVSGMVGLRH*NLPLRP
Trigger: GGGCCGCAGAGGAAGATTCCAGTGCCTCAGCCCCAC...CATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGAGTGAGAGGGAACCCTaGGGTGGGCTCGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: SVRISCLKSLEITLNQLLSEREP*GGLGRA
Trigger: TGCCCTCCCGAGCCCACCCCAGGGTTCCCTCTCACT...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTTCCTCCTCGTCTCCATaGATACCTGAGCTAAGCTTA +
Preference number: 4 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASSSSSP*IPELSL
Trigger: TAAGCTTAGCTCAGGTATCCATGGAGACGAGGAGGA...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTAGGATTTGGGGTTCTCTaGGATGGGTTCCTTCCGATG +
Preference number: 4 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLGFGVL*DGFLPM
Trigger: CATCGGAAGGAACCCATCCCAGAGAACCCCAAATCC...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp ACAGCAAAACTGAATCCTGTTCATTGTCCAGGCCAAGAAGTGGGACTGAGTTCCACCCTGGCTGTGCTTTaGGAGAATGACCCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: TAKLNPVHCPGQEVGLSSTLAVL*ENDPPC
Trigger: ACACGGAGGGTCATTCTCCCAAAGCACAGCCAGGGT...GGAACTCAGTCCCACTTCTTGGCCTGGACAATGAACAGGATTCAGTTTTGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp ACAGCAAAACTGAATCCTGTTCATTGTCCAGGCCAAGAAGTGGGACTGAGTTCCCGGGTGTCATCCTTCTaGGAACACTGGGATGCTGCT +
Preference number: 4 (lower is better)
Translates to: TAKLNPVHCPGQEVGLSSRVSSF*EHWDAA
Trigger: AGCAGCATCCCAGTGTTCCCAGAAGGATGACACCCG...GGAACTCAGTCCCACTTCTTGGCCTGGACAATGAACAGGATTCAGTTTTGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGGTTCTGGAGGGCCGTaGGGAGCATCCCTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SVRISCLKSLEITLNQLLGSGGP*GASLWS
Trigger: GCTCCAGAGGGATGCTCCCCACGGCCCTCCAGAACC...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTGCTATTACTCCTCGTCCTGGTTCTaGAGGGCCGTGGGGAGCATC +
Preference number: 4 (lower is better)
Translates to: EITLNQLLVSDVSGMCYYSSSWF*RAVGSI
Trigger: GATGCTCCCCACGGCCCTCCAGAACCAGGACGAGGA...GTAATAGCACATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTGGGGCCCGCACATCCTaGGCCTCGACTTCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: VRISCLKSLEITLNQLLVGARTS*ASTSVL
Trigger: CAGCACAGAAGTCGAGGCCCAGGATGTGCGGGCCCC...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACGCTGAGACCGACTGCTaGGACTTGGAGGACAGGGGC +
Preference number: 4 (lower is better)
Translates to: HVAFHEARTACICYSWKYAETDC*DLEDRG
Trigger: GCCCCTGTCCTCCAAGTCCCAGCAGTCGGTCTCAGC...GTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGGCTGAGACCGACTGCTaGGACTTGGAGGACAGGGGC +
Preference number: 4 (lower is better)
Translates to: KSLEITLNQLLVSDVSGMAETDC*DLEDRG
Trigger: GCCCCTGTCCTCCAAGTCCCAGCAGTCGGTCTCAGC...CATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTGAAGTGTCCGAATTTCGAGGGGCAAGCGCGATaGCAGGCTCCCTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SKNSVHMLFLEILKCPNFEGQAR*QAPSLP
Trigger: AGGAAGAGAGGGAGCCTGCCATCGCGCTTGCCCCTC...GAAATTCGGACACTTCAGTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGGAGAAGTGGCCAGGTaGGGCGCGCGTGGTGTACTG +
Preference number: 4 (lower is better)
Translates to: SVRISCLKSLEITLNQLLGEVAR*GARGVL
Trigger: CAGTACACCACGCGCGCCCCACCTGGCCACTTCTCC...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACACAGCATCGGGGTGGTaGAGAAGTGGCCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: HVAFHEARTACICYSWKYTASGW*RSGQVG
Trigger: CCCCACCTGGCCACTTCTCCACCACCCCGATGCTGT...GTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCCCCCTGCCCAAAGAGTaGGAGGCCGTCAGGACTCAC +
Preference number: 4 (lower is better)
Translates to: EKNRKHVAFHEARTACICPLPKE*EAVRTH
Trigger: GTGAGTCCTGACGGCCTCCCACTCTTTGGGCAGGGG...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTACTCTGGGATCCCATTaGAGCTCATTATCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASTLGSH*SSLSGC
Trigger: GCAACCTGATAATGAGCTCCAATGGGATCCCAGAGT...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGGACAGCCTGTCATCTaGGGACCGGACACGCACACG +
Preference number: 4 (lower is better)
Translates to: SVRISCLKSLEITLNQLLGQPVI*GPDTHT
Trigger: CGTGTGCGTGTCCGGTCCTCAGATGACAGGCTGTCC...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTGTCCCCGCCCAATGCTaGACCTGCTTGGAGACCTCC +
Preference number: 4 (lower is better)
Translates to: VRISCLKSLEITLNQLLVVPAQC*TCLETS
Trigger: GGAGGTCTCCAAGCAGGTTCAGCATTGGGCGGGGAC...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTATCAGGTCATTGGGGATaGTTTCATCCAGGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLSGHWG*FHPGCP
Trigger: TGGACAGCCTGGATGAAATCATCCCCAATGACCTGA...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTGAAGTGTCCGAATTTCTCCAGACAGGCGTGGTaGCTTCCACGCAACGGACAG +
Preference number: 4 (lower is better)
Translates to: SKNSVHMLFLEILKCPNFSRQAW*LPRNGQ
Trigger: CTGTCCGTTGCGTGGAAGGCACCACGCCTGTCTGGA...GAAATTCGGACACTTCAGTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTGAAGTGTCCGAATTTCAAGGACGATGAGAGGTaGCCTGGGTGGACGCGTGGT +
Preference number: 4 (lower is better)
Translates to: SKNSVHMLFLEILKCPNFKDDER*PGWTRG
Trigger: ACCACGCGTCCACCCAGGGCACCTCTCATCGTCCTT...GAAATTCGGACACTTCAGTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp CATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACAGGCTGGCCCCTCTCTaGGGGCTTCTCCTTAAGTCC +
Preference number: 4 (lower is better)
Translates to: HVAFHEARTACICYSWKYRLAPL*GLLLKS
Trigger: GGACTTAAGGAGAAGCCCGCAGAGAGGGGCCAGCCT...GTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGCTGGGAACACTGGGATaGTGCTGTGACCGTGCTGCG +
Preference number: 4 (lower is better)
Translates to: KSLEITLNQLLVSDVSGMLGTLG*CCDRAA
Trigger: CGCAGCACGGTCACAGCAGCATCCCAGTGTTCCCAG...CATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTGAAGTGTCCGAATTTCTGTCGTCGTCGTAGCTaGCCTGGGCATCCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: SKNSVHMLFLEILKCPNFCRRRS*PGHPRP
Trigger: AGGACGAGGATGCCCAGGGCAGCTACGACGACGACA...GAAATTCGGACACTTCAGTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGTCGTCGTCGTAGCTaGCCTGGGCATCCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: NRKHVAFHEARTACICYSCRRRS*PGHPRP
Trigger: AGGACGAGGATGCCCAGGGCAGCTACGACGACGACA...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp GAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTGCTATTACGGGCCTCGACTTCTGTaGTGTCGTCGTCGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: EITLNQLLVSDVSGMCYYGPRLL*CRRRSC
Trigger: GCAGCTACGACGACGACAGCACAGAAGTCGAGGCCC...GTAATAGCACATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTGAAGTGTCCGAATTTCGACTCCACCTGCTGGTaGTTGGGAAGGGACGCAGCT +
Preference number: 4 (lower is better)
Translates to: SKNSVHMLFLEILKCPNFDSTCW*LGRDAA
Trigger: AGCTGCGTCCCTTCCCAAGCACCAGCAGGTGGAGTC...GAAATTCGGACACTTCAGTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTCGGCTGAGACCGACTaGTGGGACTTGGAGGACAGG +
Preference number: 4 (lower is better)
Translates to: NRKHVAFHEARTACICYSSAETD*WDLEDR
Trigger: CCTGTCCTCCAAGTCCCAGCAGTCGGTCTCAGCCGA...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp CATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTCGGCTGAGACCGACTaGTGGGACTTGGAGGACAGG +
Preference number: 4 (lower is better)
Translates to: HVAFHEARTACICYSWKYSAETD*WDLEDR
Trigger: CCTGTCCTCCAAGTCCCAGCAGTCGGTCTCAGCCGA...GTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp CATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACATGTTGCGGGGAGCATaGTGGGGAGGCAGGTCACTC +
Preference number: 4 (lower is better)
Translates to: HVAFHEARTACICYSWKYMLRGA*WGGRSL
Trigger: GAGTGACCTGCCTCCCCAGCATGCTCCCCGCAACAT...GTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGTCTGAGGGTGACATaGGCGAGTCCTCCCGGGAAC +
Preference number: 4 (lower is better)
Translates to: NRKHVAFHEARTACICYSCLRVT*ASPPGN
Trigger: GTTCCCGGGAGGACTCGCCCATGTCACCCTCAGACA...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGGTGGCCGTGTCTACTTaGCGGCCTCAGGGTCCGTTT +
Preference number: 4 (lower is better)
Translates to: KSLEITLNQLLVSDVSGMVAVST*RPQGPF
Trigger: AAACGGACCCTGAGGCCGCCAAGTAGACACGGCCAC...CATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGGCGCATTGGAGTTGGTaGCTGGGGCGTCCTCACCAT +
Preference number: 4 (lower is better)
Translates to: KSLEITLNQLLVSDVSGMAHWSW*LGRPHH
Trigger: ATGGTGAGGACGCCCCAGCCACCAACTCCAATGCGC...CATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCATGGCGCATTGGAGTTaGTGGCTGGGGCGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: EKNRKHVAFHEARTACICMAHWS*WLGRPH
Trigger: GTGAGGACGCCCCAGCCACCAACTCCAATGCGCCAT...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTGCTATTACCGGAGGAGGACATGGTaGACCGTGATGGCGCATTGG +
Preference number: 4 (lower is better)
Translates to: EITLNQLLVSDVSGMCYYRRRTW*TVMAHW
Trigger: CCAATGCGCCATCACGGTCCACCATGTCCTCCTCCG...GTAATAGCACATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGGGAGATGGGCTGCCTaGAGGAGGAAGGCACGTGGT +
Preference number: 4 (lower is better)
Translates to: SVRISCLKSLEITLNQLLGRWAA*RRKARG
Trigger: ACCACGTGCCTTCCTCCTCCAGGCAGCCCATCTCCC...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTGGGGAGCATCCCTCTaGAGCTCGCCGTGTAAGGGT +
Preference number: 4 (lower is better)
Translates to: EKNRKHVAFHEARTACICWGASL*SSPCKG
Trigger: ACCCTTACACGGCGAGCTCCAGAGGGATGCTCCCCA...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGAGGACAGCATCGGGGTaGTGGAGAAGTGGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: KSLEITLNQLLVSDVSGMRTASG*WRSGQV
Trigger: CACCTGGCCACTTCTCCACCACCCCGATGCTGTCCT...CATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTATTCAGCGTAGCACTCTaGGATCCCATTGGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLFSVAL*DPIGAH
Trigger: ATGAGCTCCAATGGGATCCCAGAGTGCTACGCTGAA...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCGATGGCGCCTTCCTCTaGGATCACCCTCGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: NRKHVAFHEARTACICYSDGAFL*DHPRCG
Trigger: ACCACACCGAGGGTGATCCCAGAGGAAGGCGCCATC...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTTGCGGGGAGCATGCTaGGGAGGCAGGTCACTCTTC +
Preference number: 4 (lower is better)
Translates to: HVAFHEARTACICYSWKYLRGAC*GGRSLF
Trigger: GAAGAGTGACCTGCCTCCCCAGCATGCTCCCCGCAA...GTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCGATAGGCTCACCGCCTaGGGGCCTCACAACAAGCAG +
Preference number: 4 (lower is better)
Translates to: NRKHVAFHEARTACICYSDRLTA*GPHNKQ
Trigger: CTGCTTGTTGTGAGGCCCCCAGGCGGTGAGCCTATC...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCGATAGGCTCACCGCCTaGGGGCCTCACAACAAGCAG +
Preference number: 4 (lower is better)
Translates to: EKNRKHVAFHEARTACICDRLTA*GPHNKQ
Trigger: CTGCTTGTTGTGAGGCCCCCAGGCGGTGAGCCTATC...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTATGTTTGAAAGCGAATaGGATCCAGATAGGCTCACC +
Preference number: 4 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASMFESE*DPDRLT
Trigger: GGTGAGCCTATCTGGATCCCATTCGCTTTCAAACAT...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCCTTAGTTGGTGGGGCTaGGCAGGGCAAGCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: EKNRKHVAFHEARTACICLSWWG*AGQACS
Trigger: GCTGCAAGCTTGCCCTGCCCAGCCCCACCAACTAAG...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGCTTAGTTGGTGGGGCTaGGCAGGGCAAGCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: KSLEITLNQLLVSDVSGMLSWWG*AGQACS
Trigger: GCTGCAAGCTTGCCCTGCCCAGCCCCACCAACTAAG...CATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTGCTATTACGTGCGACTTAGTTGGTaGGGCTGGGCAGGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: EITLNQLLVSDVSGMCYYVRLSW*GWAGQA
Trigger: AGCTTGCCCTGCCCAGCCCCACCAACTAAGTCGCAC...GTAATAGCACATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCGTGCGACTTAGTTGGTaGGGCTGGGCAGGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: EKNRKHVAFHEARTACICVRLSW*GWAGQA
Trigger: AGCTTGCCCTGCCCAGCCCCACCAACTAAGTCGCAC...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp GAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTGCTATTACGTCCTGGACGAGAGATaGGAAGAGACGGAGGAGGAC +
Preference number: 4 (lower is better)
Translates to: EITLNQLLVSDVSGMCYYVLDER*EETEED
Trigger: GTCCTCCTCCGTCTCTTCTCATCTCTCGTCCAGGAC...GTAATAGCACATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp AAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGAAGGCACGTGGTCATTaGCAACGGTGGCAGGAAGCG +
Preference number: 4 (lower is better)
Translates to: KSLEITLNQLLVSDVSGMKARGH*QRWQEA
Trigger: CGCTTCCTGCCACCGTTGTCAATGACCACGTGCCTT...CATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp GAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTGCTATTACTGTGCTTTGGGAGAATaGCCCTCCGTGTCCGCGTCT +
Preference number: 4 (lower is better)
Translates to: EITLNQLLVSDVSGMCYYCALGE*PSVSAS
Trigger: AGACGCGGACACGGAGGGTCATTCTCCCAAAGCACA...GTAATAGCACATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp ACAGCAAAACTGAATCCTGTTCATTGTCCAGGCCAAGAAGTGGGACTGAGTTCCCTGTCCACTTGGAAGTaGTCCAGTGCATCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: TAKLNPVHCPGQEVGLSSLSTWK*SSASVR
Trigger: TCTGACTGATGCACTGGATCACTTCCAAGTGGACAG...GGAACTCAGTCCCACTTCTTGGCCTGGACAATGAACAGGATTCAGTTTTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTTCTTCCATCAAGGTGTaGATCCACAAATTGGCAATG +
Preference number: 4 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASSSIKV*IHKLAM
Trigger: CATTGCCAATTTGTGGATTCACACCTTGATGGAAGA...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp AGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTGAAGTGTCCGAATTTCGCCAGTGTCCATCTATaGCCTTCCTGGCACCTAGGG +
Preference number: 4 (lower is better)
Translates to: SKNSVHMLFLEILKCPNFASVHL*PSWHLG
Trigger: CCCTAGGTGCCAGGAAGGTCATAGATGGACACTGGC...GAAATTCGGACACTTCAGTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp ACAGCAAAACTGAATCCTGTTCATTGTCCAGGCCAAGAAGTGGGACTGAGTTCCTTGTCCTCCGTGTTCTaGTCAACATCCGCCTTACTG +
Preference number: 4 (lower is better)
Translates to: TAKLNPVHCPGQEVGLSSLSSVF*STSALL
Trigger: CAGTAAGGCGGATGTTGAGCAGAACACGGAGGACAA...GGAACTCAGTCCCACTTCTTGGCCTGGACAATGAACAGGATTCAGTTTTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGACTCCACCTGCTGGTaGTTGGGAAGGGACGCAGCT +
Preference number: 4 (lower is better)
Translates to: SVRISCLKSLEITLNQLLDSTCW*LGRDAA
Trigger: AGCTGCGTCCCTTCCCAAGCACCAGCAGGTGGAGTC...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGCATTGGCCAGAGGTGTaGCATGTCGCCCCTGCCCAA +
Preference number: 4 (lower is better)
Translates to: SVRISCLKSLEITLNQLLHWPEV*HVAPAQ
Trigger: TTGGGCAGGGGCGACATGGCACACCTCTGGCCAATG...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTCATTGGCCAGAGGTGTaGCATGTCGCCCCTGCCCAA +
Preference number: 4 (lower is better)
Translates to: VRISCLKSLEITLNQLLVHWPEV*HVAPAQ
Trigger: TTGGGCAGGGGCGACATGGCACACCTCTGGCCAATG...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp GAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTGCTATTACTTGCCATCATCGTCGTaGCGTTCCAAGGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: EITLNQLLVSDVSGMCYYLPSSS*RSKVPG
Trigger: CCCTGGGACCTTGGAACGGCACGACGATGATGGCAA...GTAATAGCACATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTGAAGTGTCCGAATTTCTTGCCATCATCGTCGTaGCGTTCCAAGGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SKNSVHMLFLEILKCPNFLPSSS*RSKVPG
Trigger: CCCTGGGACCTTGGAACGGCACGACGATGATGGCAA...GAAATTCGGACACTTCAGTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp ACAGCAAAACTGAATCCTGTTCATTGTCCAGGCCAAGAAGTGGGACTGAGTTCCTTGGAAGTGATCCAGTaGATCAGTCAGAGAGCACGG +
Preference number: 4 (lower is better)
Translates to: TAKLNPVHCPGQEVGLSSLEVIQ*ISQRAR
Trigger: CCGTGCTCTCTGACTGATGCACTGGATCACTTCCAA...GGAACTCAGTCCCACTTCTTGGCCTGGACAATGAACAGGATTCAGTTTTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGATGTTGCGGGGAGCATaGTGGGGAGGCAGGTCACTC +
Preference number: 4 (lower is better)
Translates to: SVRISCLKSLEITLNQLLMLRGA*WGGRSL
Trigger: GAGTGACCTGCCTCCCCAGCATGCTCCCCGCAACAT...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTAACTTTCGATACCACGTaGGCTTCACATATTGCCGTC +
Preference number: 4 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLTFDTT*ASHIAV
Trigger: GACGGCAATATGTGAAGCGCACGTGGTATCGAAAGT...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACGCTCCTCTGCCTTCTTaGCGCGAAGCTGGGGTTTTC +
Preference number: 4 (lower is better)
Translates to: HVAFHEARTACICYSWKYAPLPS*REAGVF
Trigger: GAAAACCCCAGCTTCGCGCCAAGAAGGCAGAGGAGC...GTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGCCCGCCCTTGGAAAGTaGAGAGCTCAGGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SVRISCLKSLEITLNQLLPALGK*RAQVWL
Trigger: CAGCCACACCTGAGCTCTCCACTTTCCAAGGGCGGG...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGCGCATTGGAGTTGGTaGCTGGGGCGTCCTCACCAT +
Preference number: 4 (lower is better)
Translates to: SVRISCLKSLEITLNQLLAHWSW*LGRPHH
Trigger: ATGGTGAGGACGCCCCAGCCACCAACTCCAATGCGC...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTCGGAGGAGGACATGGTaGACCGTGATGGCGCATTGG +
Preference number: 4 (lower is better)
Translates to: VRISCLKSLEITLNQLLVRRRTW*TVMAHW
Trigger: CCAATGCGCCATCACGGTCCACCATGTCCTCCTCCG...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTATCCTCCTCGTCTCCATaGATACCTGAGCTAAGCTTA +
Preference number: 4 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLSSSSP*IPELSL
Trigger: TAAGCTTAGCTCAGGTATCCATGGAGACGAGGAGGA...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTGCTATTACGCATGCATCATCCTCTaGCGCAAGGACAGCATCGGG +
Preference number: 4 (lower is better)
Translates to: EITLNQLLVSDVSGMCYYACIIL*RKDSIG
Trigger: CCCGATGCTGTCCTTGCGCCAGAGGATGATGCATGC...GTAATAGCACATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTGCTATTACGTCTGTAAGAGGGTCTaGCAGGCTGTCGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: EITLNQLLVSDVSGMCYYVCKRV*QAVGRE
Trigger: CTCTCTCCCGACAGCCTGCCAGACCCTCTTACAGAC...GTAATAGCACATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTTTTCCATGTGAATCTTaGAGGTACCTTCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASFPCES*RYLPSA
Trigger: TGCAGAAGGAAGGTACCTCCAAGATTCACATGGAAA...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCGGACTGTGGTTGTTaGACGCCTGGTGGTCGTGCG +
Preference number: 4 (lower is better)
Translates to: VRISCLKSLEITLNQLLVSDCGC*TPGGRA
Trigger: CGCACGACCACCAGGCGTCCAACAACCACAGTCCGA...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTGGTCGAAGGCTCAGTaGTGGTTGGTGGCCTTGACG +
Preference number: 4 (lower is better)
Translates to: EKNRKHVAFHEARTACICWSKAQ*WLVALT
Trigger: CGTCAAGGCCACCAACCACCACTGAGCCTTCGACCA...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTGATGGCGCCTTCCTCTaGGATCACCCTCGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: VRISCLKSLEITLNQLLVDGAFL*DHPRCG
Trigger: ACCACACCGAGGGTGATCCCAGAGGAAGGCGCCATC...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGTTGCGGGGAGCATGCTaGGGAGGCAGGTCACTCTTC +
Preference number: 4 (lower is better)
Translates to: SVRISCLKSLEITLNQLLLRGAC*GGRSLF
Trigger: GAAGAGTGACCTGCCTCCCCAGCATGCTCCCCGCAA...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACCTAGTGCGACTTAGTTaGTGGGGCTGGGCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: HVAFHEARTACICYSWKYLVRLS*WGWAGQ
Trigger: TTGCCCTGCCCAGCCCCACCAACTAAGTCGCACTAG...GTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp AAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGGCGCTCATCTTCGTCTaGGTCCACCAAGTCGTTGTC +
Preference number: 4 (lower is better)
Translates to: KSLEITLNQLLVSDVSGMALIFV*VHQVVV
Trigger: GACAACGACTTGGTGGACTCAGACGAAGATGAGCGC...CATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp ACAGCAAAACTGAATCCTGTTCATTGTCCAGGCCAAGAAGTGGGACTGAGTTCCCAAAGGGTTTGTGTCTaGGCAAATGGAAGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: TAKLNPVHCPGQEVGLSSQRVCV*ANGSVQ
Trigger: CTGGACACTTCCATTTGCTCAGACACAAACCCTTTG...GGAACTCAGTCCCACTTCTTGGCCTGGACAATGAACAGGATTCAGTTTTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCGAGGAGTACTTGCCCTaGGGATGTGTATCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: NRKHVAFHEARTACICYSEEYLP*GCVSAP
Trigger: AGGGGCAGATACACATCCTCAGGGCAAGTACTCCTC...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTGTGCTTTGGGAGAATaGCCCTCCGTGTCCGCGTCT +
Preference number: 4 (lower is better)
Translates to: VRISCLKSLEITLNQLLVCALGE*PSVSAS
Trigger: AGACGCGGACACGGAGGGTCATTCTCCCAAAGCACA...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp AGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTGAAGTGTCCGAATTTCCTTCAGGAAAGGAACTaGTGGCGCCTTCCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: SKNSVHMLFLEILKCPNFLQERN*WRLPLG
Trigger: TCCCAGAGGAAGGCGCCATCAGTTCCTTTCCTGAAG...GAAATTCGGACACTTCAGTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp ACAGCAAAACTGAATCCTGTTCATTGTCCAGGCCAAGAAGTGGGACTGAGTTCCAGCTGGGATCATGTTTaGAAGCGAATGGGATCCAGA +
Preference number: 4 (lower is better)
Translates to: TAKLNPVHCPGQEVGLSSSWDHV*KRMGSR
Trigger: TCTGGATCCCATTCGCTTTCAAACATGATCCCAGCT...GGAACTCAGTCCCACTTCTTGGCCTGGACAATGAACAGGATTCAGTTTTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp GAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTGCTATTACGGCAAGCTTGCAGCATaGCGGTCCTGTGATTACCAC +
Preference number: 4 (lower is better)
Translates to: EITLNQLLVSDVSGMCYYGKLAA*RSCDYH
Trigger: GTGGTAATCACAGGACCGTCATGCTGCAAGCTTGCC...GTAATAGCACATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGCCAGTGTCCATCTATaGCCTTCCTGGCACCTAGGG +
Preference number: 4 (lower is better)
Translates to: SVRISCLKSLEITLNQLLASVHL*PSWHLG
Trigger: CCCTAGGTGCCAGGAAGGTCATAGATGGACACTGGC...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTTATTCCTGGAAATACTaGAGTGTCCGAATTTCATGC +
Preference number: 4 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASYSWKY*SVRISC
Trigger: GCATGAAATTCGGACACTTCAGTATTTCCAGGAATA...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGCATACAAAGGGACCTaGAGCTTAAATTCAGTTAGT +
Preference number: 4 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASAYKGT*SLNSVS
Trigger: ACTAACTGAATTTAAGCTTCAGGTCCCTTTGTATGC...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTGAAGTGTCCGAATTTCAAGATCCAGCTCCTCTaGCTTCTTGGCGCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SKNSVHMLFLEILKCPNFKIQLL*LLGAKL
Trigger: CAGCTTCGCGCCAAGAAGGCAGAGGAGCTGGATCTT...GAAATTCGGACACTTCAGTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp CATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACAAGATCCAGCTCCTCTaGCTTCTTGGCGCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: HVAFHEARTACICYSWKYKIQLL*LLGAKL
Trigger: CAGCTTCGCGCCAAGAAGGCAGAGGAGCTGGATCTT...GTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGTGGACCCTGGCTGTaGTTTGGGAGAATGACCCTC +
Preference number: 4 (lower is better)
Translates to: NRKHVAFHEARTACICYSCGPWL*FGRMTL
Trigger: GAGGGTCATTCTCCCAAAGCACAGCCAGGGTCCACA...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp CATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACGTAGTAGTGGTGGGCTaGATGGTAGTGGTAGGGGGA +
Preference number: 4 (lower is better)
Translates to: HVAFHEARTACICYSWKYVVVVG*MVVVGG
Trigger: TCCCCCTACCACTACCATGCAGCCCACCACTACTAC...GTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCGTGCGCTTCACATATTaGCGTCCATGGCAGTCCGTG +
Preference number: 4 (lower is better)
Translates to: NRKHVAFHEARTACICYSVRFTY*RPWQSV
Trigger: CACGGACTGCCATGGACGGCAATATGTGAAGCGCAC...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp GAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTGCTATTACGTGCGCTTCACATATTaGCGTCCATGGCAGTCCGTG +
Preference number: 4 (lower is better)
Translates to: EITLNQLLVSDVSGMCYYVRFTY*RPWQSV
Trigger: CACGGACTGCCATGGACGGCAATATGTGAAGCGCAC...GTAATAGCACATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTCACGCTGGCTGTCTTTaGTCACAGCCCCTAGTGCGA +
Preference number: 4 (lower is better)
Translates to: VRISCLKSLEITLNQLLVHAGCL*SQPLVR
Trigger: TCGCACTAGGGGCTGTGAGCAAAGACAGCCAGCGTG...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTAAGGTTTGCCATTGACTaGCCAGACGTTCAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLRFAID*PDVQVF
Trigger: GAAAACTTGAACGTCTGGCCAGTCAATGGCAAACCT...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCCTCAGGGTCCGTTTCTaGTCTTGGGTGTCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: NRKHVAFHEARTACICYSLRVRF*SWVSEG
Trigger: ACCCTCAGACACCCAAGACCAGAAACGGACCCTGAG...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCCATCCTTCCCGCCCTTaGAAAGTGGAGAGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: EKNRKHVAFHEARTACICHPSRP*KVESSG
Trigger: ACCTGAGCTCTCCACTTTCCAAGGGCGGGAAGGATG...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTAGACGGAGGAGGACATaGTGGACCGTGATGGCGCAT +
Preference number: 4 (lower is better)
Translates to: VRISCLKSLEITLNQLLVRRRRT*WTVMAH
Trigger: ATGCGCCATCACGGTCCACCATGTCCTCCTCCGTCT...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCCTATCGCCGTCACCGTaGCTTTCACCATCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: NRKHVAFHEARTACICYSLSPSP*LSPSEA
Trigger: GGCTTCTGATGGTGAAAGCCACGGTGACGGCGATAG...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTGAAGTGTCCGAATTTCGAGGAGGAAGGCACGTaGTCATTGACAACGGTGGCA +
Preference number: 4 (lower is better)
Translates to: SKNSVHMLFLEILKCPNFEEEGT*SLTTVA
Trigger: TGCCACCGTTGTCAATGACCACGTGCCTTCCTCCTC...GAAATTCGGACACTTCAGTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTGGGGTTCTCTGGGATaGGTTCCTTCCGATGCAGGC +
Preference number: 4 (lower is better)
Translates to: VRISCLKSLEITLNQLLVWGSLG*VPSDAG
Trigger: GCCTGCATCGGAAGGAACCCATCCCAGAGAACCCCA...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCCTGCCCCTGTGGATTTaGGGTTCTCTGGGATGGGTT +
Preference number: 4 (lower is better)
Translates to: NRKHVAFHEARTACICYSLPLWI*GSLGWV
Trigger: AACCCATCCCAGAGAACCCCAAATCCACAGGGGCAG...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTGCGGTCTGTGGACCCTaGCTGTGCTTTGGGAGAATG +
Preference number: 4 (lower is better)
Translates to: VRISCLKSLEITLNQLLVAVCGP*LCFGRM
Trigger: CATTCTCCCAAAGCACAGCCAGGGTCCACAGACCGC...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTCTGTAAGAGGGTCTaGCAGGCTGTCGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: SVRISCLKSLEITLNQLLVCKRV*QAVGRE
Trigger: CTCTCTCCCGACAGCCTGCCAGACCCTCTTACAGAC...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTCGAAGGCTCAGTGGTaGTTGGTGGCCTTGACGTCT +
Preference number: 4 (lower is better)
Translates to: NRKHVAFHEARTACICYSSKAQW*LVALTS
Trigger: AGACGTCAAGGCCACCAACCACCACTGAGCCTTCGA...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTGTGACCACATCTCCTaGGGTGGCTTTGTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: EKNRKHVAFHEARTACICCDHIS*GGFVPV
Trigger: GACTGGGACAAAGCCACCCCAGGAGATGTGGTCACA...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTAATAATACCTCGTGTTaGGCTTTAGGTTCTCAATGG +
Preference number: 4 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASNNTSC*ALGSQW
Trigger: CCATTGAGAACCTAAAGCCCAACACGAGGTATTATT...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGACCACTTTCCAGGGATaGAGACCCCACACTCGTACC +
Preference number: 4 (lower is better)
Translates to: KSLEITLNQLLVSDVSGMTTFQG*RPHTRT
Trigger: GGTACGAGTGTGGGGTCTCCATCCCTGGAAAGTGGT...CATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp AGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTGAAGTGTCCGAATTTCGACACAAGCACAGACTaGGATGACATAACCCGGACG +
Preference number: 4 (lower is better)
Translates to: SKNSVHMLFLEILKCPNFDTSTD*DDITRT
Trigger: CGTCCGGGTTATGTCATCTCAGTCTGTGCTTGTGTC...GAAATTCGGACACTTCAGTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCGTGATTTCTGTCGACTaGAGATCCAGCTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: NRKHVAFHEARTACICYSVISVD*RSSSSA
Trigger: GGCAGAGGAGCTGGATCTTCAGTCGACAGAAATCAC...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp CATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACGTGATTTCTGTCGACTaGAGATCCAGCTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: HVAFHEARTACICYSWKYVISVD*RSSSSA
Trigger: GGCAGAGGAGCTGGATCTTCAGTCGACAGAAATCAC...GTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp GAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTGCTATTACGTCCACAATGACAAATaGGTGGCAACCTTCCACGGC +
Preference number: 4 (lower is better)
Translates to: EITLNQLLVSDVSGMCYYVHNDK*VATFHG
Trigger: GCCGTGGAAGGTTGCCACTCATTTGTCATTGTGGAC...GTAATAGCACATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCAAACCAAGTAACCTGTaGCCACATCTCCTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: NRKHVAFHEARTACICYSKPSNL*PHLLGW
Trigger: CCACCCCAGGAGATGTGGTCACAGGTTACTTGGTTT...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp AGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTGAAGTGTCCGAATTTCCGATGTTCCCAAACCTaGCAGGCTCCTGACGATACT +
Preference number: 4 (lower is better)
Translates to: SKNSVHMLFLEILKCPNFRCSQT*QAPDDT
Trigger: AGTATCGTCAGGAGCCTGTCAGGTTTGGGAACATCG...GAAATTCGGACACTTCAGTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp ACAGCAAAACTGAATCCTGTTCATTGTCCAGGCCAAGAAGTGGGACTGAGTTCCGTCTGGAAATCACACTaGATCAGTTGCTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: TAKLNPVHCPGQEVGLSSVWKSH*ISCWFL
Trigger: CAGAAACCAGCAACTGATTCAGTGTGATTTCCAGAC...GGAACTCAGTCCCACTTCTTGGCCTGGACAATGAACAGGATTCAGTTTTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTGAAGTGTCCGAATTTCGACAGCAGTTTCACATaGCTTGGCTTCAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SKNSVHMLFLEILKCPNFDSSFT*LGFSGW
Trigger: CCACCCACTGAAGCCAAGGCATGTGAAACTGCTGTC...GAAATTCGGACACTTCAGTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297267.14
CDS-3UTR GCA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTATCCACTGTGGTTTTCTaGAGTAAGCAGCACAAAGTA +
Preference number: 4 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLSTVVF*SKQHKV
Trigger: TACTTTGTGCTGCTTACTGCAGAAAACCACAGTGGA...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTGAAAACCCCGTGATCTaGGTGGACTCTTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: VRISCLKSLEITLNQLLVENPVI*VDSWLQ
Trigger: CTGGAGCCAAGAGTCCACGCAGATCACGGGGTTTTC...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGCCGTGTCCGCGTCTGTaGTCTGTTGAACATCCTGAG +
Preference number: 4 (lower is better)
Translates to: SVRISCLKSLEITLNQLLPCPRL*SVEHPE
Trigger: CTCAGGATGTTCAACAGAGCACAGACGCGGACACGG...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGTGTGGACCCTGGCTGTaGTTTGGGAGAATGACCCTC +
Preference number: 4 (lower is better)
Translates to: SVRISCLKSLEITLNQLLCGPWL*FGRMTL
Trigger: GAGGGTCATTCTCCCAAAGCACAGCCAGGGTCCACA...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTGCTATTACGGTAGCATCTTTGGGTaGGTCCCACGTGACTTTCAG +
Preference number: 4 (lower is better)
Translates to: EITLNQLLVSDVSGMCYYGSIFG*VPRDFQ
Trigger: CTGAAAGTCACGTGGGACCCACCCAAAGATGCTACC...GTAATAGCACATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTGGCCCTGAGAGTTCATaGACTGCAGGGAGACCACAT +
Preference number: 4 (lower is better)
Translates to: VRISCLKSLEITLNQLLVGPESS*TAGRPH
Trigger: ATGTGGTCTCCCTGCAGTCCATGAACTCTCAGGGCC...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp ACAGCAAAACTGAATCCTGTTCATTGTCCAGGCCAAGAAGTGGGACTGAGTTCCAGGTTTGCCATTGACTaGCCAGACGTTCAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: TAKLNPVHCPGQEVGLSSRFAID*PDVQVF
Trigger: GAAAACTTGAACGTCTGGCCAGTCAATGGCAAACCT...GGAACTCAGTCCCACTTCTTGGCCTGGACAATGAACAGGATTCAGTTTTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTGAAGTGTCCGAATTTCTTGGCATTTCTCCCTTaGGGAGAAGCAGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: SKNSVHMLFLEILKCPNFLAFLP*GEAGTE
Trigger: CTCTGTGCCTGCTTCTCCCCAAGGGAGAAATGCCAA...GAAATTCGGACACTTCAGTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACCGTTGTCATTCAAGCTaGCAGGCAGGGAAGGACGAT +
Preference number: 4 (lower is better)
Translates to: HVAFHEARTACICYSWKYRCHSS*QAGKDD
Trigger: ATCGTCCTTCCCTGCCTGCCAGCTTGAATGACAACG...GTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGCATCCTTCCCGCCCTTaGAAAGTGGAGAGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: SVRISCLKSLEITLNQLLHPSRP*KVESSG
Trigger: ACCTGAGCTCTCCACTTTCCAAGGGCGGGAAGGATG...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTGCTATTACCAGAGACCTGCGTCCTaGACGAGAGATGAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: EITLNQLLVSDVSGMCYYQRPAS*TRDEKR
Trigger: TCTCTTCTCATCTCTCGTCCAGGACGCAGGTCTCTG...GTAATAGCACATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTTGGAGACCTCCCGTTaGCAGCAAAGGGTTTGTGTC +
Preference number: 4 (lower is better)
Translates to: KSLEITLNQLLVSDVSGMLETSR*QQRVCV
Trigger: GACACAAACCCTTTGCTGCCAACGGGAGGTCTCCAA...CATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTAATGCTGAACCTGCTTaGAGACCTCCCGTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: VRISCLKSLEITLNQLLVNAEPA*RPPVGS
Trigger: GCTGCCAACGGGAGGTCTCCAAGCAGGTTCAGCATT...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGGGATTTGGGGTTCTCTaGGATGGGTTCCTTCCGATG +
Preference number: 4 (lower is better)
Translates to: KSLEITLNQLLVSDVSGMGFGVL*DGFLPM
Trigger: CATCGGAAGGAACCCATCCCAGAGAACCCCAAATCC...CATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGAACATCCTGAGCCTTaGAGGCCAGGGAGGAGTACT +
Preference number: 4 (lower is better)
Translates to: SVRISCLKSLEITLNQLLEHPEP*RPGRST
Trigger: AGTACTCCTCCCTGGCCTCCAAGGCTCAGGATGTTC...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGGCTTATCTTGGGCATTaGCCAGAGGTGTGCCATGTC +
Preference number: 4 (lower is better)
Translates to: KSLEITLNQLLVSDVSGMAYLGH*PEVCHV
Trigger: GACATGGCACACCTCTGGCCAATGCCCAAGATAAGC...CATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTAGCTTTAGGTTCTCAATaGGCAAGTGAGTTACTGATG +
Preference number: 4 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLALGSQ*ASELLM
Trigger: CATCAGTAACTCACTTGCCCATTGAGAACCTAAAGC...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGACACAAGCACAGACTaGGATGACATAACCCGGACG +
Preference number: 4 (lower is better)
Translates to: SVRISCLKSLEITLNQLLDTSTD*DDITRT
Trigger: CGTCCGGGTTATGTCATCTCAGTCTGTGCTTGTGTC...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp GAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTGCTATTACCTGTCCACTTGGAAGTaGTCCAGTGCATCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: EITLNQLLVSDVSGMCYYLSTWK*SSASVR
Trigger: TCTGACTGATGCACTGGATCACTTCCAAGTGGACAG...GTAATAGCACATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp GAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTGCTATTACTCAGGTCATTGGGGATaGTTTCATCCAGGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: EITLNQLLVSDVSGMCYYSGHWG*FHPGCP
Trigger: TGGACAGCCTGGATGAAATCATCCCCAATGACCTGA...GTAATAGCACATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp CATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACCTGAGGATGTGTATCTaGCCCTGTGGATTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: HVAFHEARTACICYSWKYLRMCI*PCGFGV
Trigger: AACCCCAAATCCACAGGGGCAGATACACATCCTCAG...GTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCCTGAGGATGTGTATCTaGCCCTGTGGATTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: EKNRKHVAFHEARTACICLRMCI*PCGFGV
Trigger: AACCCCAAATCCACAGGGGCAGATACACATCCTCAG...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTCCAGGGAGGAGTACTTaGCCTGAGGATGTGTATCTG +
Preference number: 4 (lower is better)
Translates to: VRISCLKSLEITLNQLLVPGRST*PEDVYL
Trigger: CAGATACACATCCTCAGGGCAAGTACTCCTCCCTGG...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTATTCATTAAATGGTCCTaGACCCTTAATGGGAAAACC +
Preference number: 4 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLFIKWS*TLNGKT
Trigger: GGTTTTCCCATTAAGGGTCCAGGACCATTTAATGAA...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACCAAGAAGAAGGTCCTTaGCATTTCTCCCTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: HVAFHEARTACICYSWKYQEEGP*HFSLGE
Trigger: CTCCCCAAGGGAGAAATGCCAAGGACCTTCTTCTTG...GTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTGTCCGTTTCTGGTCTTaGGTGTCTGAGGGTGACATG +
Preference number: 4 (lower is better)
Translates to: VRISCLKSLEITLNQLLVVRFWS*VSEGDM
Trigger: CATGTCACCCTCAGACACCCAAGACCAGAAACGGAC...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTTGGAGACCTCCCGTTaGCAGCAAAGGGTTTGTGTC +
Preference number: 4 (lower is better)
Translates to: VRISCLKSLEITLNQLLVLETSR*QQRVCV
Trigger: GACACAAACCCTTTGCTGCCAACGGGAGGTCTCCAA...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTGTATCTGCCCCTGTaGATTTGGGGTTCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: SVRISCLKSLEITLNQLLVYLPL*IWGSLG
Trigger: TCCCAGAGAACCCCAAATCCACAGGGGCAGATACAC...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGGAAGAGGGCCACTTTaGCACAGAGGAAGACAGAAG +
Preference number: 4 (lower is better)
Translates to: SVRISCLKSLEITLNQLLGRGPL*HRGRQK
Trigger: CTTCTGTCTTCCTCTGTGCCAAAGTGGCCCTCTTCC...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTGAGGGTTACGGAATCTaGCATGCATCATCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: VRISCLKSLEITLNQLLVEGYGI*HASSSG
Trigger: GCCAGAGGATGATGCATGCCAGATTCCGTAACCCTC...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTATGTGAATCCACAAATTaGCAATGGTCTTCACCTCTT +
Preference number: 4 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLCESTN*QWSSPL
Trigger: AAGAGGTGAAGACCATTGCCAATTTGTGGATTCACA...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCCAACATCCGCCTTACTaGCTTTCACTTTCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: NRKHVAFHEARTACICYSQHPPY*LSLSPQ
Trigger: CTGAGGGGAAAGTGAAAGCCAGTAAGGCGGATGTTG...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329629.8
CDS-3UTR TCA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCGAGAGCCGGGGCGTATaGAAGAATGTATTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: NRKHVAFHEARTACICYSESRGV*KNVFFH
Trigger: GTGAAAGAATACATTCTTTCATACGCCCCGGCTCTC...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297267.14
CDS-3UTR TCA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGTTGCTCCAAATGGTTTaGGAGCCGGGGCGTATGAAA +
Preference number: 4 (lower is better)
Translates to: SVRISCLKSLEITLNQLLLLQMV*EPGRMK
Trigger: TTTCATACGCCCCGGCTCTCAAACCATTTGGAGCAA...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297267.14
CDS-3UTR TCA 90 bp AAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGGGTGGTTGGTGGCCTTaGCGTCTCAAATTCATAATC +
Preference number: 4 (lower is better)
Translates to: KSLEITLNQLLVSDVSGMGGWWP*RLKFII
Trigger: GATTATGAATTTGAGACGTCAAGGCCACCAACCACC...CATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCGGTGGTTGGTGGCCTTaGCGTCTCAAATTCATAATC +
Preference number: 4 (lower is better)
Translates to: EKNRKHVAFHEARTACICGGWWP*RLKFII
Trigger: GATTATGAATTTGAGACGTCAAGGCCACCAACCACC...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGTCCCAGTCCACAATaGCAAATGAGTGGCAACCTT +
Preference number: 4 (lower is better)
Translates to: NRKHVAFHEARTACICYSCPSPQ*QMSGNL
Trigger: AAGGTTGCCACTCATTTGTCATTGTGGACTGGGACA...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp AAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGGTTACTGATGAAGCTTaGGTGGACCACTTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: KSLEITLNQLLVSDVSGMVTDEA*VDHLFL
Trigger: CAGGAACAAGTGGTCCACTCAAGCTTCATCAGTAAC...CATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCGATTATCTGATTCGGTaGCAAATGAGACCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: EKNRKHVAFHEARTACICDYLIR*QMRPKG
Trigger: GCCCTTCGGTCTCATTTGTCACCGAATCAGATAATC...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp GAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTGCTATTACAGCTGGGATCATGTTTaGAAGCGAATGGGATCCAGA +
Preference number: 4 (lower is better)
Translates to: EITLNQLLVSDVSGMCYYSWDHV*KRMGSR
Trigger: TCTGGATCCCATTCGCTTTCAAACATGATCCCAGCT...GTAATAGCACATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGAGCATGACGGTCCTGTaGTTACCACTTTCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: SVRISCLKSLEITLNQLLSMTVL*LPLSRD
Trigger: ATCCCTGGAAAGTGGTAATCACAGGACCGTCATGCT...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTCAGTTGCTGGTTTCTaGTGTCTCTGGGATGTGCTA +
Preference number: 4 (lower is better)
Translates to: EKNRKHVAFHEARTACICSVAGF*CLWDVL
Trigger: TAGCACATCCCAGAGACATCAGAAACCAGCAACTGA...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCGCATGTAGCATTCCATaGAGCAAGAACAGCGTGCAT +
Preference number: 4 (lower is better)
Translates to: EKNRKHVAFHEARTACICACSIP*SKNSVH
Trigger: ATGCACGCTGTTCTTGCTTCATGGAATGCTACATGC...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGCTGACGTACTCCATTTaGCATCTCTTTCACCCTGTG +
Preference number: 4 (lower is better)
Translates to: KSLEITLNQLLVSDVSGMLTYSI*HLFHPV
Trigger: CACAGGGTGAAAGAGATGGCAAATGGAGTACGTCAG...CATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp CATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACAGCTCATTATCAGGTTaGCATCATCGTCGTGCCGTT +
Preference number: 4 (lower is better)
Translates to: HVAFHEARTACICYSWKYSSLSG*HHRRAV
Trigger: AACGGCACGACGATGATGGCAACCTGATAATGAGCT...GTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTCAGTTTCACATGCCTTaGCTTCAGTGGGTGGTCAAC +
Preference number: 4 (lower is better)
Translates to: VRISCLKSLEITLNQLLVQFHMP*LQWVVN
Trigger: GTTGACCACCCACTGAAGCCAAGGCATGTGAAACTG...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297267.14
CDS-3UTR CCA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTGCTTATAATCCCACCTaGCCAATTCCCCCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: VRISCLKSLEITLNQLLVAYNPT*PIPPSL
Trigger: GAGAGAAGGGGGAATTGGCCAGGTGGGATTATAAGC...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTGCTATTACTCCACAAATTGGCAATaGTCTTCACCTCTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: EITLNQLLVSDVSGMCYYSTNWQ*SSPLPQ
Trigger: CTGGGGAAGAGGTGAAGACCATTGCCAATTTGTGGA...GTAATAGCACATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTCCACAAATTGGCAATaGTCTTCACCTCTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: KSLEITLNQLLVSDVSGMSTNWQ*SSPLPQ
Trigger: CTGGGGAAGAGGTGAAGACCATTGCCAATTTGTGGA...CATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCCACGGTGTACTGTCTTaGTGCAACAACTTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: EKNRKHVAFHEARTACICHGVLS*CNNFLL
Trigger: CAGAAGAAAGTTGTTGCATCAAGACAGTACACCGTG...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCACCCACTTTGTTCCTTaGGGGCCATTGATAATTCTC +
Preference number: 4 (lower is better)
Translates to: EKNRKHVAFHEARTACICTHFVP*GPLIIL
Trigger: GAGAATTATCAATGGCCCTCAAGGAACAAAGTGGGT...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCGTCTGGAAATCACACTaGATCAGTTGCTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: EKNRKHVAFHEARTACICVWKSH*ISCWFL
Trigger: CAGAAACCAGCAACTGATTCAGTGTGATTTCCAGAC...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGATAGGTGAGGGACTTTaGTCCAAATGGTTTGAGAGC +
Preference number: 4 (lower is better)
Translates to: KSLEITLNQLLVSDVSGMIGEGL*SKWFES
Trigger: GCTCTCAAACCATTTGGAGCAAAGTCCCTCACCTAT...CATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297267.14
CDS-3UTR GCA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGACTTTCGATACCACGTaGGCTTCACATATTGCCGTC +
Preference number: 4 (lower is better)
Translates to: SVRISCLKSLEITLNQLLTFDTT*ASHIAV
Trigger: GACGGCAATATGTGAAGCGCACGTGGTATCGAAAGT...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCGACGGTTTCATTAAATaGTCCTGGACCCTTAATGGG +
Preference number: 4 (lower is better)
Translates to: NRKHVAFHEARTACICYSDGFIK*SWTLNG
Trigger: CCCATTAAGGGTCCAGGACCATTTAATGAAACCGTC...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCCTTCCAGATCTACAATaGTTCGACCATCTCCTCCTA +
Preference number: 4 (lower is better)
Translates to: EKNRKHVAFHEARTACICLPDLQ*FDHLLL
Trigger: TAGGAGGAGATGGTCGAACCATTGTAGATCTGGAAG...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCCTTCCAGATCTACAATaGTTCGACCATCTCCTCCTA +
Preference number: 4 (lower is better)
Translates to: NRKHVAFHEARTACICYSLPDLQ*FDHLLL
Trigger: TAGGAGGAGATGGTCGAACCATTGTAGATCTGGAAG...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGACTCTGGGATCCCATTaGAGCTCATTATCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: SVRISCLKSLEITLNQLLTLGSH*SSLSGC
Trigger: GCAACCTGATAATGAGCTCCAATGGGATCCCAGAGT...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGTGTTCTTTGGAAGACTaGCGTACTCCATTTGCCATC +
Preference number: 4 (lower is better)
Translates to: SVRISCLKSLEITLNQLLCSLED*RTPFAI
Trigger: GATGGCAAATGGAGTACGTCAGTCTTCCAAAGAACA...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGAAGAGGATTTCCATGTaGATCTTGGAGGTACCTTCC +
Preference number: 4 (lower is better)
Translates to: SVRISCLKSLEITLNQLLKRISM*ILEVPS
Trigger: GGAAGGTACCTCCAAGATTCACATGGAAATCCTCTT...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp CATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTCCACTGTGGTTTTCTaGAGTAAGCAGCACAAAGTA +
Preference number: 4 (lower is better)
Translates to: HVAFHEARTACICYSWKYSTVVF*SKQHKV
Trigger: TACTTTGTGCTGCTTACTGCAGAAAACCACAGTGGA...GTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCCCCAGCTGTCTCCAATaGTGTAGAATGTATCTTTCA +
Preference number: 4 (lower is better)
Translates to: EKNRKHVAFHEARTACICPSCLQ*CRMYLS
Trigger: TGAAAGATACATTCTACAGCATTGGAGACAGCTGGG...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCGAAGCAAGAACAGCGTaGATATGCTATTCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: NRKHVAFHEARTACICYSEARTA*ICYSWK
Trigger: TTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTC...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTTTCCATGTGAATCTTaGAGGTACCTTCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: HVAFHEARTACICYSWKYFPCES*RYLPSA
Trigger: TGCAGAAGGAAGGTACCTCCAAGATTCACATGGAAA...GTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTCCAAGACTCAAAATTaGCTTATCTTGGGCATTGGC +
Preference number: 4 (lower is better)
Translates to: HVAFHEARTACICYSWKYSKTQN*LILGIG
Trigger: GCCAATGCCCAAGATAAGCCAATTTTGAGTCTTGGA...GTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
3UTR CAA 72 bp TCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTaGCTGGTTTCTGATGTCTCTGGGATGTGCTATTAC +
Preference number: 4 (lower is better)
Translates to: SCLKSLEITLNQ*LVSDVSGMCYY
Trigger: GTAATAGCACATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTTCCATCAAGGTGTaGATCCACAAATTGGCAATG +
Preference number: 4 (lower is better)
Translates to: VRISCLKSLEITLNQLLVSSIKV*IHKLAM
Trigger: CATTGCCAATTTGTGGATTCACACCTTGATGGAAGA...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR TCA 90 bp AAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTATTCCTGGAAATACTaGAGTGTCCGAATTTCATGC +
Preference number: 4 (lower is better)
Translates to: KSLEITLNQLLVSDVSGMYSWKY*SVRISC
Trigger: GCATGAAATTCGGACACTTCAGTATTTCCAGGAATA...CATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp CATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTTCATTAAATGGTCCTaGACCCTTAATGGGAAAACC +
Preference number: 4 (lower is better)
Translates to: HVAFHEARTACICYSWKYFIKWS*TLNGKT
Trigger: GGTTTTCCCATTAAGGGTCCAGGACCATTTAATGAA...GTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGATTCTGGTGTTCTTTaGAAGACTGACGTACTCCAT +
Preference number: 4 (lower is better)
Translates to: SVRISCLKSLEITLNQLLDSGVL*KTDVLH
Trigger: ATGGAGTACGTCAGTCTTCCAAAGAACACCAGAATC...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTGCTTTAGGTTCTCAATaGGCAAGTGAGTTACTGATG +
Preference number: 4 (lower is better)
Translates to: VRISCLKSLEITLNQLLVALGSQ*ASELLM
Trigger: CATCAGTAACTCACTTGCCCATTGAGAACCTAAAGC...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGAATAATACCTCGTGTTaGGCTTTAGGTTCTCAATGG +
Preference number: 4 (lower is better)
Translates to: KSLEITLNQLLVSDVSGMNNTSC*ALGSQW
Trigger: CCATTGAGAACCTAAAGCCCAACACGAGGTATTATT...CATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp GAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTGCTATTACTGTGAATCCACAAATTaGCAATGGTCTTCACCTCTT +
Preference number: 4 (lower is better)
Translates to: EITLNQLLVSDVSGMCYYCESTN*QWSSPL
Trigger: AAGAGGTGAAGACCATTGCCAATTTGTGGATTCACA...GTAATAGCACATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGAAGTCTTCATAGGATaGACTGTAAACCAAGTAACC +
Preference number: 4 (lower is better)
Translates to: SVRISCLKSLEITLNQLLEVFIG*TVNQVT
Trigger: GGTTACTTGGTTTACAGTGCATCCTATGAAGACTTC...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCAGTGTCCGAATTTCATaGCTAAAAAGTCTGGAAATC +
Preference number: 4 (lower is better)
Translates to: NRKHVAFHEARTACICYSSVRIS*LKSLEI
Trigger: GATTTCCAGACTTTTTAGGCATGAAATTCGGACACT...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp GAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTGCTATTACAGTGTCCGAATTTCATaGCTAAAAAGTCTGGAAATC +
Preference number: 4 (lower is better)
Translates to: EITLNQLLVSDVSGMCYYSVRIS*LKSLEI
Trigger: GATTTCCAGACTTTTTAGGCATGAAATTCGGACACT...GTAATAGCACATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR GCA 90 bp AAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGATAATTCCTTTCTACTaGATACAAAGGGACCTGAAG +
Preference number: 4 (lower is better)
Translates to: KSLEITLNQLLVSDVSGMIIPFY*IQRDLK
Trigger: CTTCAGGTCCCTTTGTATGCAGTAGAAAGGAATTAT...CATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTTCATCTCTTGTCAGTaGAACATAATTCATCTTCCG +
Preference number: 4 (lower is better)
Translates to: KSLEITLNQLLVSDVSGMFISCQ*NIIHLP
Trigger: CGGAAGATGAATTATGTTCCACTGACAAGAGATGAA...CATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CCA 90 bp AGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTGAAGTGTCCGAATTTCTTTCCCTTCTACATTTaGTCTGCCATTATAACCTTG +
Preference number: 4 (lower is better)
Translates to: SKNSVHMLFLEILKCPNFFPFYI*SAIITL
Trigger: CAAGGTTATAATGGCAGACCAAATGTAGAAGGGAAA...GAAATTCGGACACTTCAGTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp TGGGTACCCGGGCGCGGGACTGGGGGCCGCCGGGTCGGCTGGGCCTaGCGGGGGAGGCCGCATGTCCGCGCTGGGACCTGTGGTCGCCAC +
Preference number: 5 (lower is better)
Translates to: WVPGRGTGGRRVGWA*RGRPHVRAGTCGRH
Trigger: GTGGCGACCACAGGTCCCAGCGCGGACATGCGGCCTCCCCCGCCAGGCCCAGCCGACCCGGCGGCCCCCAGTCCCGCGCCCGGGTACCCA
80% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp CCCTGCTGGGTACCCGGGCGCGGGACTGGGGGCCGCCGGGTCGGCTaGGCCTGGCGGGGGAGGCCGCATGTCCGCGCTGGGACCTGTGGT +
Preference number: 5 (lower is better)
Translates to: PCWVPGRGTGGRRVG*AWRGRPHVRAGTCG
Trigger: ACCACAGGTCCCAGCGCGGACATGCGGCCTCCCCCGCCAGGCCCAGCCGACCCGGCGGCCCCCAGTCCCGCGCCCGGGTACCCAGCAGGG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp TGGTGTACTGCGGCCAGGGGTGGGTGCCCGCGACGGGGCTCACGGTaGCAGCGCTGCGAGGCGGCAGTCGGGAAGGGACGTGGGAGGCCC +
Preference number: 5 (lower is better)
Translates to: WCTAARGGCPRRGSR*QRCEAAVGKGRGRP
Trigger: GGGCCTCCCACGTCCCTTCCCGACTGCCGCCTCGCAGCGCTGCCACCGTGAGCCCCGTCGCGGGCACCCACCCCTGGCCGCAGTACACCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp CGCCACCTGCCCCTGCGCCTGTGGGAGACTCCACCTGCTGGTGCTTaGGAAGGGACGCAGCTGCCTCCTTGGCGCGCGCGGCGTGCGCGG +
Preference number: 5 (lower is better)
Translates to: RHLPLRLWETPPAGA*EGTQLPPWRARRAR
Trigger: CCGCGCACGCCGCGCGCGCCAAGGAGGCAGCTGCGTCCCTTCCCAAGCACCAGCAGGTGGAGTCTCCCACAGGCGCAGGGGCAGGTGGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 90 bp CCAGAGGCAGGCCGGGCCCGCAGCGTCTGGGCCGTGGCCTCCGCCTaGCTTCCGCCGTCTTCCCTATCGCCGTCACCGTGGCTTTCACCA +
Preference number: 5 (lower is better)
Translates to: PEAGRARSVWAVASA*LPPSSLSPSPWLSP
Trigger: TGGTGAAAGCCACGGTGACGGCGATAGGGAAGACGGCGGAAGGCAGGCGGAGGCCACGGCCCAGACGCTGCGGGCCCGGCCTGCCTCTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 90 bp TGGTGCTTGGGAAGGGACGCAGCTGCCTCCTTGGCGCGCGCGGCGTaGGCGGGGGCCCGCACATCCTGGGCCTCGACTTCTGTGCTGTCG +
Preference number: 5 (lower is better)
Translates to: WCLGRDAAASLARAA*AGARTSWASTSVLS
Trigger: CGACAGCACAGAAGTCGAGGCCCAGGATGTGCGGGCCCCCGCGCACGCCGCGCGCGCCAAGGAGGCAGCTGCGTCCCTTCCCAAGCACCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 90 bp TGGTCGCCACCTGCCCCTGCGCCTGTGGGAGACTCCACCTGCTGGTaGTTGGGAAGGGACGCAGCTGCCTCCTTGGCGCGCGCGGCGTGC +
Preference number: 5 (lower is better)
Translates to: WSPPAPAPVGDSTCW*LGRDAAASLARAAC
Trigger: GCACGCCGCGCGCGCCAAGGAGGCAGCTGCGTCCCTTCCCAAGCACCAGCAGGTGGAGTCTCCCACAGGCGCAGGGGCAGGTGGCGACCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 90 bp GGCGGGGGAGGCCGCATGTCCGCGCTGGGACCTGTGGTCGCCACCTaGCCCTGCGCCTGTGGGAGACTCCACCTGCTGGTGCTTGGGAAG +
Preference number: 5 (lower is better)
Translates to: GGGGRMSALGPVVAT*PCACGRLHLLVLGK
Trigger: CTTCCCAAGCACCAGCAGGTGGAGTCTCCCACAGGCGCAGGGGCAGGTGGCGACCACAGGTCCCAGCGCGGACATGCGGCCTCCCCCGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp CTGTGGTCGCCACCTGCCCCTGCGCCTGTGGGAGACTCCACCTGCTaGTGCTTGGGAAGGGACGCAGCTGCCTCCTTGGCGCGCGCGGCG +
Preference number: 5 (lower is better)
Translates to: LWSPPAPAPVGDSTC*CLGRDAAASLARAA
Trigger: CGCCGCGCGCGCCAAGGAGGCAGCTGCGTCCCTTCCCAAGCACCAGCAGGTGGAGTCTCCCACAGGCGCAGGGGCAGGTGGCGACCACAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp CCTCTGGCGCAAGGACAGCATCGGGGTGGTGGAGAAGTGGCCAGGTaGGGCGCGCGTGGTGTACTGCGGCCAGGGGTGGGTGCCCGCGAC +
Preference number: 5 (lower is better)
Translates to: PLAQGQHRGGGEVAR*GARGVLRPGVGARD
Trigger: GTCGCGGGCACCCACCCCTGGCCGCAGTACACCACGCGCGCCCCACCTGGCCACTTCTCCACCACCCCGATGCTGTCCTTGCGCCAGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 90 bp TGTGGGGCCCGGCCGGGTGTCATCCTTCTGGGAACACTGGGATGCTaGTGTGACCGTGCTGCGGGCGGACGAGCAGGGGACGCGTGGCGG +
Preference number: 5 (lower is better)
Translates to: CGARPGVILLGTLGC*CDRAAGGRAGDAWR
Trigger: CCGCCACGCGTCCCCTGCTCGTCCGCCCGCAGCACGGTCACAGCAGCATCCCAGTGTTCCCAGAAGGATGACACCCGGCCGGGCCCCACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 90 bp GCGCGGCGTGCGCGGGGGCCCGCACATCCTGGGCCTCGACTTCTGTaGTGTCGTCGTCGTAGCTGCCCTGGGCATCCTCGTCCTGGTTCT +
Preference number: 5 (lower is better)
Translates to: ARRARGPAHPGPRLL*CRRRSCPGHPRPGS
Trigger: AGAACCAGGACGAGGATGCCCAGGGCAGCTACGACGACGACAGCACAGAAGTCGAGGCCCAGGATGTGCGGGCCCCCGCGCACGCCGCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp CCTCGGCTGAGACCGACTGCTGGGACTTGGAGGACAGGGGCCGCTTaGAAGGAGGCTCCGACTTCCCCGGCGCTGCCCTGCTGGGTACCC +
Preference number: 5 (lower is better)
Translates to: PRLRPTAGTWRTGAA*KEAPTSPALPCWVP
Trigger: GGGTACCCAGCAGGGCAGCGCCGGGGAAGTCGGAGCCTCCTTCCAAGCGGCCCCTGTCCTCCAAGTCCCAGCAGTCGGTCTCAGCCGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp TCCCTCCGCGAGGGGCAAGCGCGATGGCAGGCTCCCTCTCTTCCTTaGCGAGGCTCCCATCGGCGTCTTTGCCGCCCCTGGGAGTGGAGG +
Preference number: 5 (lower is better)
Translates to: SLREGQARWQAPSLP*RGSHRRLCRPWEWR
Trigger: CCTCCACTCCCAGGGGCGGCAAAGACGCCGATGGGAGCCTCGCCAAGGAAGAGAGGGAGCCTGCCATCGCGCTTGCCCCTCGCGGAGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp TGGTTCGGACTGTGGTTGTTGGACGCCTGGTGGTCGTGCGGCGGGTaGTGGTCGTGCGGCGGGTGGTGGCAGTGGTGGGCCTCGGGGTTG +
Preference number: 5 (lower is better)
Translates to: WFGLWLLDAWWSCGG*WSCGGWWQWWASGL
Trigger: CAACCCCGAGGCCCACCACTGCCACCACCCGCCGCACGACCACCACCCGCCGCACGACCACCAGGCGTCCAACAACCACAGTCCGAACCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 90 bp CTTCCCTTCGGGGCAGCGCTGGCATCCGGGCCCTCACTGCAGTCCTaGCGGGAGCAACCACCGAGTGGCCGTGTCTACTTGGCGGCCTCA +
Preference number: 5 (lower is better)
Translates to: LPFGAALASGPSLQS*REQPPSGRVYLAAS
Trigger: TGAGGCCGCCAAGTAGACACGGCCACTCGGTGGTTGCTCCCGGCAGGACTGCAGTGAGGGCCCGGATGCCAGCGCTGCCCCGAAGGGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 90 bp GGGTGGGCTCGGGAGGGCACAGTCGACTGTGGGGAGCTGGAGGGCTaGAGCCGAGGTCCCCGCCCAATGCTGAACCTGCTTGGAGACCTC +
Preference number: 5 (lower is better)
Translates to: GWAREGTVDCGELEG*SRGPRPMLNLLGDL
Trigger: GAGGTCTCCAAGCAGGTTCAGCATTGGGCGGGGACCTCGGCTGCAGCCCTCCAGCTCCCCACAGTCGACTGTGCCCTCCCGAGCCCACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 90 bp TGTTGTGGGGCCCGGCCGGGTGTCATCCTTCTGGGAACACTGGGATaGTGCTGTGACCGTGCTGCGGGCGGACGAGCAGGGGACGCGTGG +
Preference number: 5 (lower is better)
Translates to: CCGARPGVILLGTLG*CCDRAAGGRAGDAW
Trigger: CCACGCGTCCCCTGCTCGTCCGCCCGCAGCACGGTCACAGCAGCATCCCAGTGTTCCCAGAAGGATGACACCCGGCCGGGCCCCACAACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp GAGGAGGGGGCTGCTGTTGTGGGGCCCGGCCGGGTGTCATCCTTCTaGGAACACTGGGATGCTGCTGTGACCGTGCTGCGGGCGGACGAG +
Preference number: 5 (lower is better)
Translates to: EEGAAVVGPGRVSSF*EHWDAAVTVLRADE
Trigger: CTCGTCCGCCCGCAGCACGGTCACAGCAGCATCCCAGTGTTCCCAGAAGGATGACACCCGGCCGGGCCCCACAACAGCAGCCCCCTCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp GGGCATCCTCGTCCTGGTTCTGGAGGGCCGTGGGGAGCATCCCTCTaGAGCTCGCCGTGTAAGGGTCCGAGGAGGAGTGGGAGCGGCCCT +
Preference number: 5 (lower is better)
Translates to: GHPRPGSGGPWGASL*SSPCKGPRRSGSGP
Trigger: AGGGCCGCTCCCACTCCTCCTCGGACCCTTACACGGCGAGCTCCAGAGGGATGCTCCCCACGGCCCTCCAGAACCAGGACGAGGATGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp TGCTGCGGGCGGACGAGCAGGGGACGCGTGGCGGTCTGTGGACCCTaGCTGTGCTTTGGGAGAATGACCCTCCGTGTCCGCGTCTGTGCT +
Preference number: 5 (lower is better)
Translates to: CCGRTSRGRVAVCGP*LCFGRMTLRVRVCA
Trigger: AGCACAGACGCGGACACGGAGGGTCATTCTCCCAAAGCACAGCCAGGGTCCACAGACCGCCACGCGTCCCCTGCTCGTCCGCCCGCAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp CGTCGTAGCTGCCCTGGGCATCCTCGTCCTGGTTCTGGAGGGCCGTaGGGAGCATCCCTCTGGAGCTCGCCGTGTAAGGGTCCGAGGAGG +
Preference number: 5 (lower is better)
Translates to: RRSCPGHPRPGSGGP*GASLWSSPCKGPRR
Trigger: CCTCCTCGGACCCTTACACGGCGAGCTCCAGAGGGATGCTCCCCACGGCCCTCCAGAACCAGGACGAGGATGCCCAGGGCAGCTACGACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp GTCGCTTCACAGGAGCCAGGCTCCCTCCGCGAGGGGCAAGCGCGATaGCAGGCTCCCTCTCTTCCTTGGCGAGGCTCCCATCGGCGTCTT +
Preference number: 5 (lower is better)
Translates to: VASQEPGSLREGQAR*QAPSLPWRGSHRRL
Trigger: AAGACGCCGATGGGAGCCTCGCCAAGGAAGAGAGGGAGCCTGCCATCGCGCTTGCCCCTCGCGGAGGGAGCCTGGCTCCTGTGAAGCGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp GGTGGTGGTGGTGGTTGTCCGCGTAGTGGTTCGGACTGTGGTTGTTaGACGCCTGGTGGTCGTGCGGCGGGTGGTGGTCGTGCGGCGGGT +
Preference number: 5 (lower is better)
Translates to: GGGGGCPRSGSDCGC*TPGGRAAGGGRAAG
Trigger: ACCCGCCGCACGACCACCACCCGCCGCACGACCACCAGGCGTCCAACAACCACAGTCCGAACCACTACGCGGACAACCACCACCACCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 90 bp ATCTACGCCTTCCCTTCGGGGCAGCGCTGGCATCCGGGCCCTCACTaGAGTCCTGCCGGGAGCAACCACCGAGTGGCCGTGTCTACTTGG +
Preference number: 5 (lower is better)
Translates to: IYAFPSGQRWHPGPH*SPAGSNHRVAVSTW
Trigger: CCAAGTAGACACGGCCACTCGGTGGTTGCTCCCGGCAGGACTGCAGTGAGGGCCCGGATGCCAGCGCTGCCCCGAAGGGAAGGCGTAGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 90 bp GGGCGGACGAGCAGGGGACGCGTGGCGGTCTGTGGACCCTGGCTGTaGTTTGGGAGAATGACCCTCCGTGTCCGCGTCTGTGCTCTGTTG +
Preference number: 5 (lower is better)
Translates to: GRTSRGRVAVCGPWL*FGRMTLRVRVCALL
Trigger: CAACAGAGCACAGACGCGGACACGGAGGGTCATTCTCCCAAAGCACAGCCAGGGTCCACAGACCGCCACGCGTCCCCTGCTCGTCCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 90 bp CCCGCACATCCTGGGCCTCGACTTCTGTGCTGTCGTCGTCGTAGCTaGCCTGGGCATCCTCGTCCTGGTTCTGGAGGGCCGTGGGGAGCA +
Preference number: 5 (lower is better)
Translates to: PAHPGPRLLCCRRRS*PGHPRPGSGGPWGA
Trigger: TGCTCCCCACGGCCCTCCAGAACCAGGACGAGGATGCCCAGGGCAGCTACGACGACGACAGCACAGAAGTCGAGGCCCAGGATGTGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp GGCATCCGGGCCCTCACTGCAGTCCTGCCGGGAGCAACCACCGAGTaGCCGTGTCTACTTGGCGGCCTCAGGGTCCGTTTCTGGTCTTGG +
Preference number: 5 (lower is better)
Translates to: GIRALTAVLPGATTE*PCLLGGLRVRFWSW
Trigger: CCAAGACCAGAAACGGACCCTGAGGCCGCCAAGTAGACACGGCCACTCGGTGGTTGCTCCCGGCAGGACTGCAGTGAGGGCCCGGATGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 90 bp TGGCAGGCTCCCTCTCTTCCTTGGCGAGGCTCCCATCGGCGTCTTTaGCGCCCCTGGGAGTGGAGGAAGAGGGCCACTTTGGCACAGAGG +
Preference number: 5 (lower is better)
Translates to: WQAPSLPWRGSHRRL*RPWEWRKRATLAQR
Trigger: CCTCTGTGCCAAAGTGGCCCTCTTCCTCCACTCCCAGGGGCGGCAAAGACGCCGATGGGAGCCTCGCCAAGGAAGAGAGGGAGCCTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp CAGGGAAAAGCCAGGCTTATCTACGCCTTCCCTTCGGGGCAGCGCTaGCATCCGGGCCCTCACTGCAGTCCTGCCGGGAGCAACCACCGA +
Preference number: 5 (lower is better)
Translates to: QGKARLIYAFPSGQR*HPGPHCSPAGSNHR
Trigger: TCGGTGGTTGCTCCCGGCAGGACTGCAGTGAGGGCCCGGATGCCAGCGCTGCCCCGAAGGGAAGGCGTAGATAAGCCTGGCTTTTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp GTGGCCTCCGCCTGCCTTCCGCCGTCTTCCCTATCGCCGTCACCGTaGCTTTCACCATCAGAAGCCTCCGCTCCCTCAGAGACCTGCGTC +
Preference number: 5 (lower is better)
Translates to: VASACLPPSSLSPSP*LSPSEASAPSETCV
Trigger: GACGCAGGTCTCTGAGGGAGCGGAGGCTTCTGATGGTGAAAGCCACGGTGACGGCGATAGGGAAGACGGCGGAAGGCAGGCGGAGGCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp AATCCCGCGTCCTCCTCCTCGTCGTCCTCGGCTGAGACCGACTGCTaGGACTTGGAGGACAGGGGCCGCTTGGAAGGAGGCTCCGACTTC +
Preference number: 5 (lower is better)
Translates to: NPASSSSSSSAETDC*DLEDRGRLEGGSDF
Trigger: GAAGTCGGAGCCTCCTTCCAAGCGGCCCCTGTCCTCCAAGTCCCAGCAGTCGGTCTCAGCCGAGGACGACGAGGAGGAGGACGCGGGATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp ATCTGGCATGCATCATCCTCTGGCGCAAGGACAGCATCGGGGTGGTaGAGAAGTGGCCAGGTGGGGCGCGCGTGGTGTACTGCGGCCAGG +
Preference number: 5 (lower is better)
Translates to: IWHASSSGARTASGW*RSGQVGRAWCTAAR
Trigger: CCTGGCCGCAGTACACCACGCGCGCCCCACCTGGCCACTTCTCCACCACCCCGATGCTGTCCTTGCGCCAGAGGATGATGCATGCCAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp GGAATCTGGCATGCATCATCCTCTGGCGCAAGGACAGCATCGGGGTaGTGGAGAAGTGGCCAGGTGGGGCGCGCGTGGTGTACTGCGGCC +
Preference number: 5 (lower is better)
Translates to: GIWHASSSGARTASG*WRSGQVGRAWCTAA
Trigger: GGCCGCAGTACACCACGCGCGCCCCACCTGGCCACTTCTCCACCACCCCGATGCTGTCCTTGCGCCAGAGGATGATGCATGCCAGATTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp GGTTGCCATCATCGTCGTGCCGTTCCAAGGTCCCAGGGGGACAGGTaGGGATGGGAGTGGTGGGTGTGGGGGTGGTGGTGGTGGTTGTCC +
Preference number: 5 (lower is better)
Translates to: GCHHRRAVPRSQGDR*GWEWWVWGWWWWLS
Trigger: GGACAACCACCACCACCACCCCCACACCCACCACTCCCATCCCCACCTGTCCCCCTGGGACCTTGGAACGGCACGACGATGATGGCAACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 90 bp AAAAATCCCGCGTCCTCCTCCTCGTCGTCCTCGGCTGAGACCGACTaGTGGGACTTGGAGGACAGGGGCCGCTTGGAAGGAGGCTCCGAC +
Preference number: 5 (lower is better)
Translates to: KNPASSSSSSSAETD*WDLEDRGRLEGGSD
Trigger: GTCGGAGCCTCCTTCCAAGCGGCCCCTGTCCTCCAAGTCCCAGCAGTCGGTCTCAGCCGAGGACGACGAGGAGGAGGACGCGGGATTTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp GAGTGGCCGTGTCTACTTGGCGGCCTCAGGGTCCGTTTCTGGTCTTaGGTGTCTGAGGGTGACATGGGCGAGTCCTCCCGGGAACCCAGC +
Preference number: 5 (lower is better)
Translates to: EWPCLLGGLRVRFWS*VSEGDMGESSREPS
Trigger: GCTGGGTTCCCGGGAGGACTCGCCCATGTCACCCTCAGACACCCAAGACCAGAAACGGACCCTGAGGCCGCCAAGTAGACACGGCCACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp TCCTCCCAGCCCCGGGAGATGGGCTGCCTGGAGGAGGAAGGCACGTaGTCATTGACAACGGTGGCAGGAAGCGGCTTCTCATCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: SSQPREMGCLEEEGT*SLTTVAGSGFSSSS
Trigger: CGAGGAGGATGAGAAGCCGCTTCCTGCCACCGTTGTCAATGACCACGTGCCTTCCTCCTCCAGGCAGCCCATCTCCCGGGGCTGGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTCTCCCATCGGCGTCTTaGCCGCCCCTGGGAGTGGAG +
Preference number: 5 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFLPSAS*PPLGVE
Trigger: CTCCACTCCCAGGGGCGGCAAAGACGCCGATGGGAG...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp CTTTGCTCACAGCCCCTAGTGCGACTTAGTTGGTGGGGCTGGGCAGGGCAAGCTCTCCCATCGGCGTCTTaGCCGCCCCTGGGAGTGGAG +
Preference number: 5 (lower is better)
Translates to: LCSQPLVRLSWWGWAGQALPSAS*PPLGVE
Trigger: CTCCACTCCCAGGGGCGGCAAAGACGCCGATGGGAG...AGCTTGCCCTGCCCAGCCCCACCAACTAAGTCGCACTAGGGGCTGTGAGCAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp CTTTGCTCACAGCCCCTAGTGCGACTTAGTTGGTGGGGCTGGGCAGGGCAAGCTGGCTCCCTCTCTTCCTaGGCGAGGCTCCCATCGGCG +
Preference number: 5 (lower is better)
Translates to: LCSQPLVRLSWWGWAGQAGSLSS*ARLPSA
Trigger: CGCCGATGGGAGCCTCGCCAAGGAAGAGAGGGAGCC...AGCTTGCCCTGCCCAGCCCCACCAACTAAGTCGCACTAGGGGCTGTGAGCAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS TCA 90 bp GGCGCCCTTGGGGTGGAGGGAGCCCACAGCGCGCTCATCTTCGTCTaGGTCCACCAAGTCGTTGTCATTCAAGCTGGCAGGCAGGGAAGG +
Preference number: 5 (lower is better)
Translates to: GALGVEGAHSALIFV*VHQVVVIQAGRQGR
Trigger: CCTTCCCTGCCTGCCAGCTTGAATGACAACGACTTGGTGGACTCAGACGAAGATGAGCGCGCTGTGGGCTCCCTCCACCCCAAGGGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS TCA 90 bp ACTGTGGGGAGCTGGAGGGCTGCAGCCGAGGTCCCCGCCCAATGCTaGACCTGCTTGGAGACCTCCCGTTGGCAGCAAAGGGTTTGTGTC +
Preference number: 5 (lower is better)
Translates to: TVGSWRAAAEVPAQC*TCLETSRWQQRVCV
Trigger: GACACAAACCCTTTGCTGCCAACGGGAGGTCTCCAAGCAGGTTCAGCATTGGGCGGGGACCTCGGCTGCAGCCCTCCAGCTCCCCACAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp TTGGGCATTGGCCAGAGGTGTGCCATGTCGCCCCTGCCCAAAGAGTaGGAGGCCGTCAGGACTCACCACGGGGGTCCCTTCCAGATCTAC +
Preference number: 5 (lower is better)
Translates to: LGIGQRCAMSPLPKE*EAVRTHHGGPFQIY
Trigger: GTAGATCTGGAAGGGACCCCCGTGGTGAGTCCTGACGGCCTCCCACTCTTTGGGCAGGGGCGACATGGCACACCTCTGGCCAATGCCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp CTTTGCTCACAGCCCCTAGTGCGACTTAGTTGGTGGGGCTGGGCAGGGCAAGCTGACCGTGATGGCGCATaGGAGTTGGTGGCTGGGGCG +
Preference number: 5 (lower is better)
Translates to: LCSQPLVRLSWWGWAGQADRDGA*ELVAGA
Trigger: CGCCCCAGCCACCAACTCCAATGCGCCATCACGGTC...AGCTTGCCCTGCCCAGCCCCACCAACTAAGTCGCACTAGGGGCTGTGAGCAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS TCA 90 bp TCCACCAAGTCGTTGTCATTCAAGCTGGCAGGCAGGGAAGGACGATaGGAGGTGCCCTGGGTGGACGCGTGGTGGGCAGGAGAGGCCGAA +
Preference number: 5 (lower is better)
Translates to: STKSLSFKLAGREGR*EVPWVDAWWAGEAE
Trigger: TTCGGCCTCTCCTGCCCACCACGCGTCCACCCAGGGCACCTCTCATCGTCCTTCCCTGCCTGCCAGCTTGAATGACAACGACTTGGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS TCA 90 bp AGCCCCGGGAGATGGGCTGCCTGGAGGAGGAAGGCACGTGGTCATTaGCAACGGTGGCAGGAAGCGGCTTCTCATCCTCCTCGTCTCCAT +
Preference number: 5 (lower is better)
Translates to: SPGRWAAWRRKARGH*QRWQEAASHPPRLH
Trigger: ATGGAGACGAGGAGGATGAGAAGCCGCTTCCTGCCACCGTTGTCAATGACCACGTGCCTTCCTCCTCCAGGCAGCCCATCTCCCGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 90 bp ATTGGCTTATCTTGGGCATTGGCCAGAGGTGTGCCATGTCGCCCCTaGCCAAAGAGTGGGAGGCCGTCAGGACTCACCACGGGGGTCCCT +
Preference number: 5 (lower is better)
Translates to: IGLSWALARGVPCRP*PKSGRPSGLTTGVP
Trigger: AGGGACCCCCGTGGTGAGTCCTGACGGCCTCCCACTCTTTGGGCAGGGGCGACATGGCACACCTCTGGCCAATGCCCAAGATAAGCCAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp AGACGGAGGAGGACATGGTGGACCGTGATGGCGCATTGGAGTTGGTaGCTGGGGCGTCCTCACCATCCTTCCCGCCCTTGGAAAGTGGAG +
Preference number: 5 (lower is better)
Translates to: RRRRTWWTVMAHWSW*LGRPHHPSRPWKVE
Trigger: CTCCACTTTCCAAGGGCGGGAAGGATGGTGAGGACGCCCCAGCCACCAACTCCAATGCGCCATCACGGTCCACCATGTCCTCCTCCGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp GACGAGCAGGGGACGCGTGGCGGTCTGTGGACCCTGGCTGTGCTTTaGGAGAATGACCCTCCGTGTCCGCGTCTGTGCTCTGTTGAACAT +
Preference number: 5 (lower is better)
Translates to: DEQGTRGGLWTLAVL*ENDPPCPRLCSVEH
Trigger: ATGTTCAACAGAGCACAGACGCGGACACGGAGGGTCATTCTCCCAAAGCACAGCCAGGGTCCACAGACCGCCACGCGTCCCCTGCTCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp CCCTCTCTTCCTTGGCGAGGCTCCCATCGGCGTCTTTGCCGCCCCTaGGAGTGGAGGAAGAGGGCCACTTTGGCACAGAGGAAGACAGAA +
Preference number: 5 (lower is better)
Translates to: PSLPWRGSHRRLCRP*EWRKRATLAQRKTE
Trigger: TTCTGTCTTCCTCTGTGCCAAAGTGGCCCTCTTCCTCCACTCCCAGGGGCGGCAAAGACGCCGATGGGAGCCTCGCCAAGGAAGAGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp GGCTGTCGGGAGAGAGGGTTACGGAATCTGGCATGCATCATCCTCTaGCGCAAGGACAGCATCGGGGTGGTGGAGAAGTGGCCAGGTGGG +
Preference number: 5 (lower is better)
Translates to: GCRERGLRNLACIIL*RKDSIGVVEKWPGG
Trigger: CCCACCTGGCCACTTCTCCACCACCCCGATGCTGTCCTTGCGCCAGAGGATGATGCATGCCAGATTCCGTAACCCTCTCTCCCGACAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTAGTGGCCGTGTCTACTaGGCGGCCTCAGGGTCCGTT +
Preference number: 5 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFSGRVY*AASGSV
Trigger: AACGGACCCTGAGGCCGCCAAGTAGACACGGCCACT...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTAGGAGGGGGCTGCTGTaGTGGGGCCCGGCCGGGTGT +
Preference number: 5 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASRRGLL*WGPAGC
Trigger: ACACCCGGCCGGGCCCCACAACAGCAGCCCCCTCCT...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS TCA 90 bp TCCAGACAGGCGTGGTGCCTTCCACGCAACGGACAGCCTGTCATCTaGGGACCGGACACGCACACGCAAGGGCTTGTTGGGCACTTCCTT +
Preference number: 5 (lower is better)
Translates to: SRQAWCLPRNGQPVI*GPDTHTQGLVGHFL
Trigger: AAGGAAGTGCCCAACAAGCCCTTGCGTGTGCGTGTCCGGTCCTCAGATGACAGGCTGTCCGTTGCGTGGAAGGCACCACGCCTGTCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp CATCCTTCCCGCCCTTGGAAAGTGGAGAGCTCAGGTGTGGCTGGGTaGGCAGCAGCCGAGATGATCCCCCATGGGGTGGAGAAAGTCTTG +
Preference number: 5 (lower is better)
Translates to: HPSRPWKVESSGVAG*AAAEMIPHGVEKVL
Trigger: CAAGACTTTCTCCACCCCATGGGGGATCATCTCGGCTGCTGCCCACCCAGCCACACCTGAGCTCTCCACTTTCCAAGGGCGGGAAGGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp AAGAGACGGAGGAGGACATGGTGGACCGTGATGGCGCATTGGAGTTaGTGGCTGGGGCGTCCTCACCATCCTTCCCGCCCTTGGAAAGTG +
Preference number: 5 (lower is better)
Translates to: KRRRRTWWTVMAHWS*WLGRPHHPSRPWKV
Trigger: CACTTTCCAAGGGCGGGAAGGATGGTGAGGACGCCCCAGCCACCAACTCCAATGCGCCATCACGGTCCACCATGTCCTCCTCCGTCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp GCTGGAGGGCTGCAGCCGAGGTCCCCGCCCAATGCTGAACCTGCTTaGAGACCTCCCGTTGGCAGCAAAGGGTTTGTGTCTGAGCAAATG +
Preference number: 5 (lower is better)
Translates to: AGGLQPRSPPNAEPA*RPPVGSKGFVSEQM
Trigger: CATTTGCTCAGACACAAACCCTTTGCTGCCAACGGGAGGTCTCCAAGCAGGTTCAGCATTGGGCGGGGACCTCGGCTGCAGCCCTCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp CTTCCTTGGCGAGGCTCCCATCGGCGTCTTTGCCGCCCCTGGGAGTaGAGGAAGAGGGCCACTTTGGCACAGAGGAAGACAGAAGGTCTT +
Preference number: 5 (lower is better)
Translates to: LPWRGSHRRLCRPWE*RKRATLAQRKTEGL
Trigger: AAGACCTTCTGTCTTCCTCTGTGCCAAAGTGGCCCTCTTCCTCCACTCCCAGGGGCGGCAAAGACGCCGATGGGAGCCTCGCCAAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGCGTGCGCTTCACATATaGCCGTCCATGGCAGTCCGT +
Preference number: 5 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLRALHI*PSMAVR
Trigger: ACGGACTGCCATGGACGGCAATATGTGAAGCGCACG...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS TCA 90 bp AGTTGGTGGGGCTGGGCAGGGCAAGCTTGCAGCATGACGGTCCTGTaGTTACCACTTTCCAGGGATGGAGACCCCACACTCGTACCAGCC +
Preference number: 5 (lower is better)
Translates to: SWWGWAGQACSMTVL*LPLSRDGDPTLVPA
Trigger: GGCTGGTACGAGTGTGGGGTCTCCATCCCTGGAAAGTGGTAATCACAGGACCGTCATGCTGCAAGCTTGCCCTGCCCAGCCCCACCAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp CGCGCTCATCTTCGTCTGAGTCCACCAAGTCGTTGTCATTCAAGCTaGCAGGCAGGGAAGGACGATGAGAGGTGCCCTGGGTGGACGCGT +
Preference number: 5 (lower is better)
Translates to: RAHLRLSPPSRCHSS*QAGKDDERCPGWTR
Trigger: ACGCGTCCACCCAGGGCACCTCTCATCGTCCTTCCCTGCCTGCCAGCTTGAATGACAACGACTTGGTGGACTCAGACGAAGATGAGCGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp GGGAGGAGTACTTGCCCTGAGGATGTGTATCTGCCCCTGTGGATTTaGGGTTCTCTGGGATGGGTTCCTTCCGATGCAGGCTGGCCCCTC +
Preference number: 5 (lower is better)
Translates to: GRSTCPEDVYLPLWI*GSLGWVPSDAGWPL
Trigger: GAGGGGCCAGCCTGCATCGGAAGGAACCCATCCCAGAGAACCCCAAATCCACAGGGGCAGATACACATCCTCAGGGCAAGTACTCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp GACCCTCCGTGTCCGCGTCTGTGCTCTGTTGAACATCCTGAGCCTTaGAGGCCAGGGAGGAGTACTTGCCCTGAGGATGTGTATCTGCCC +
Preference number: 5 (lower is better)
Translates to: DPPCPRLCSVEHPEP*RPGRSTCPEDVYLP
Trigger: GGGCAGATACACATCCTCAGGGCAAGTACTCCTCCCTGGCCTCCAAGGCTCAGGATGTTCAACAGAGCACAGACGCGGACACGGAGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp TGTAAGAGGGTCTGGCAGGCTGTCGGGAGAGAGGGTTACGGAATCTaGCATGCATCATCCTCTGGCGCAAGGACAGCATCGGGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: CKRVWQAVGREGYGI*HASSSGARTASGWW
Trigger: CCACCACCCCGATGCTGTCCTTGCGCCAGAGGATGATGCATGCCAGATTCCGTAACCCTCTCTCCCGACAGCCTGCCAGACCCTCTTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp CTTTGCTCACAGCCCCTAGTGCGACTTAGTTGGTGGGGCTGGGCAGGGCAAGCTAGCTCCTCTGCCTTCTaGGCGCGAAGCTGGGGTTTT +
Preference number: 5 (lower is better)
Translates to: LCSQPLVRLSWWGWAGQASSSAF*ARSWGF
Trigger: AAAACCCCAGCTTCGCGCCAAGAAGGCAGAGGAGCT...AGCTTGCCCTGCCCAGCCCCACCAACTAAGTCGCACTAGGGGCTGTGAGCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGAGTCCACCAAGTCGTaGTCATTCAAGCTGGCAGGC +
Preference number: 5 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLESTKS*SFKLAG
Trigger: GCCTGCCAGCTTGAATGACAACGACTTGGTGGACTC...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp CTTTGCTCACAGCCCCTAGTGCGACTTAGTTGGTGGGGCTGGGCAGGGCAAGCTGAAGGCACGTGGTCATaGACAACGGTGGCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: LCSQPLVRLSWWGWAGQAEGTWS*TTVAGS
Trigger: GCTTCCTGCCACCGTTGTCAATGACCACGTGCCTTC...AGCTTGCCCTGCCCAGCCCCACCAACTAAGTCGCACTAGGGGCTGTGAGCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS TCA 90 bp TCGTCTCCATGGATACCTGAGCTAAGCTTAGGGTGGGAATCAGAGTaGGAGGGAACCCTGGGGTGGGCTCGGGAGGGCACAGTCGACTGT +
Preference number: 5 (lower is better)
Translates to: SSPWIPELSLGWESE*EGTLGWAREGTVDC
Trigger: ACAGTCGACTGTGCCCTCCCGAGCCCACCCCAGGGTTCCCTCTCACTCTGATTCCCACCCTAAGCTTAGCTCAGGTATCCATGGAGACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS TCA 90 bp GACCACATCTCCTGGGGTGGCTTTGTCCCAGTCCACAATGACAAATaGGTGGCAACCTTCCACGGCCACCACGGTGATGTTGCGGGGAGC +
Preference number: 5 (lower is better)
Translates to: DHISWGGFVPVHNDK*VATFHGHHGDVAGS
Trigger: GCTCCCCGCAACATCACCGTGGTGGCCGTGGAAGGTTGCCACTCATTTGTCATTGTGGACTGGGACAAAGCCACCCCAGGAGATGTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 90 bp TCTGGGATCCCATTGGAGCTCATTATCAGGTTGCCATCATCGTCGTaGCGTTCCAAGGTCCCAGGGGGACAGGTGGGGATGGGAGTGGTG +
Preference number: 5 (lower is better)
Translates to: SGIPLELIIRLPSSS*RSKVPGGQVGMGVV
Trigger: CACCACTCCCATCCCCACCTGTCCCCCTGGGACCTTGGAACGGCACGACGATGATGGCAACCTGATAATGAGCTCCAATGGGATCCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp AGGCCAGGGAGGAGTACTTGCCCTGAGGATGTGTATCTGCCCCTGTaGATTTGGGGTTCTCTGGGATGGGTTCCTTCCGATGCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: RPGRSTCPEDVYLPL*IWGSLGWVPSDAGW
Trigger: CCAGCCTGCATCGGAAGGAACCCATCCCAGAGAACCCCAAATCCACAGGGGCAGATACACATCCTCAGGGCAAGTACTCCTCCCTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp TTAGGGCAGCCCTGTAGACTGGTTGGCTCCGGCCCTGAGAGTTCATaGACTGCAGGGAGACCACATACACGGATTCCGAGGCAAGGGTTC +
Preference number: 5 (lower is better)
Translates to: LGQPCRLVGSGPESS*TAGRPHTRIPRQGF
Trigger: GAACCCTTGCCTCGGAATCCGTGTATGTGGTCTCCCTGCAGTCCATGAACTCTCAGGGCCGGAGCCAACCAGTCTACAGGGCTGCCCTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480856.1
CDS-3UTR CAA 90 bp CTTTGCTCACAGCCCCTAGTGCGACTTAGTTGGTGGGGCTGGGCAGGGCAAGCTAAGGCTCAGTGGTGGTaGGTGGCCTTGACGTCTCAA +
Preference number: 5 (lower is better)
Translates to: LCSQPLVRLSWWGWAGQAKAQWW*VALTSQ
Trigger: TTGAGACGTCAAGGCCACCAACCACCACTGAGCCTT...AGCTTGCCCTGCCCAGCCCCACCAACTAAGTCGCACTAGGGGCTGTGAGCAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGCTGGCGATAGTAGCCTaGAATAGTAGGGAGGGCTTC +
Preference number: 5 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLLAIVA*NSREGF
Trigger: GAAGCCCTCCCTACTATTCAAGGCTACTATCGCCAG...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS TCA 90 bp CTTTGGAGTGAGGTCCCAGGCCTCTCCTGTTTGTGGCCCGGATTTTaGAAAGATAGCGTTCCCCAGGCTGCAGACCATCCACCAGGGCAG +
Preference number: 5 (lower is better)
Translates to: LWSEVPGLSCLWPGF*KDSVPQAADHPPGQ
Trigger: CTGCCCTGGTGGATGGTCTGCAGCCTGGGGAACGCTATCTTTTCAAAATCCGGGCCACAAACAGGAGAGGCCTGGGACCTCACTCCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297267.14
CDS TCA 90 bp GGTGGCAGGAAGCGGCTTCTCATCCTCCTCGTCTCCATGGATACCTaGGCTAAGCTTAGGGTGGGAATCAGAGTGAGAGGGAACCCTGGG +
Preference number: 5 (lower is better)
Translates to: GGRKRLLILLVSMDT*AKLRVGIRVRGNPG
Trigger: CCCAGGGTTCCCTCTCACTCTGATTCCCACCCTAAGCTTAGCTCAGGTATCCATGGAGACGAGGAGGATGAGAAGCCGCTTCCTGCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 90 bp TCCCACGTGACTTTCAGGCCCATTTTAGTGGACAGCAGTTTCACATaGCTTGGCTTCAGTGGGTGGTCAACTGAGGCCGCCGCCGAGGAG +
Preference number: 5 (lower is better)
Translates to: SHVTFRPILVDSSFT*LGFSGWSTEAAAEE
Trigger: CTCCTCGGCGGCGGCCTCAGTTGACCACCCACTGAAGCCAAGGCATGTGAAACTGCTGTCCACTAAAATGGGCCTGAAAGTCACGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297267.14
CDS GCA 90 bp AGCCTTGGAGGCCAGGGAGGAGTACTTGCCCTGAGGATGTGTATCTaGCCCTGTGGATTTGGGGTTCTCTGGGATGGGTTCCTTCCGATG +
Preference number: 5 (lower is better)
Translates to: SLGGQGGVLALRMCI*PCGFGVLWDGFLPM
Trigger: CATCGGAAGGAACCCATCCCAGAGAACCCCAAATCCACAGGGGCAGATACACATCCTCAGGGCAAGTACTCCTCCCTGGCCTCCAAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 90 bp CTTCAGCGTAGCACTCTGGGATCCCATTGGAGCTCATTATCAGGTTaGCATCATCGTCGTGCCGTTCCAAGGTCCCAGGGGGACAGGTGG +
Preference number: 5 (lower is better)
Translates to: LQRSTLGSHWSSLSG*HHRRAVPRSQGDRW
Trigger: CCACCTGTCCCCCTGGGACCTTGGAACGGCACGACGATGATGGCAACCTGATAATGAGCTCCAATGGGATCCCAGAGTGCTACGCTGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp CCAGCGGCTTTCCTCCAAGACTCAAAATTGGCTTATCTTGGGCATTaGCCAGAGGTGTGCCATGTCGCCCCTGCCCAAAGAGTGGGAGGC +
Preference number: 5 (lower is better)
Translates to: PAAFLQDSKLAYLGH*PEVCHVAPAQRVGG
Trigger: GCCTCCCACTCTTTGGGCAGGGGCGACATGGCACACCTCTGGCCAATGCCCAAGATAAGCCAATTTTGAGTCTTGGAGGAAAGCCGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp TGGCAACCTTCCACGGCCACCACGGTGATGTTGCGGGGAGCATGCTaGGGAGGCAGGTCACTCTTCTTCAGGTCATTGGGGATGATTTCA +
Preference number: 5 (lower is better)
Translates to: WQPSTATTVMLRGAC*GGRSLFFRSLGMIS
Trigger: TGAAATCATCCCCAATGACCTGAAGAAGAGTGACCTGCCTCCCCAGCATGCTCCCCGCAACATCACCGTGGTGGCCGTGGAAGGTTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp CCGTCCATGGCAGTCCGTGTAGCTGGGATCATGTTTGAAAGCGAATaGGATCCAGATAGGCTCACCGCCTGGGGGCCTCACAACAAGCAG +
Preference number: 5 (lower is better)
Translates to: PSMAVRVAGIMFESE*DPDRLTAWGPHNKQ
Trigger: CTGCTTGTTGTGAGGCCCCCAGGCGGTGAGCCTATCTGGATCCCATTCGCTTTCAAACATGATCCCAGCTACACGGACTGCCATGGACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGCACGCTGGCTGTCTTaGCTCACAGCCCCTAGTGCG +
Preference number: 5 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASARWLS*LTAPSA
Trigger: CGCACTAGGGGCTGTGAGCAAAGACAGCCAGCGTGC...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 90 bp CTCCAAGACTCAAAATTGGCTTATCTTGGGCATTGGCCAGAGGTGTaGCATGTCGCCCCTGCCCAAAGAGTGGGAGGCCGTCAGGACTCA +
Preference number: 5 (lower is better)
Translates to: LQDSKLAYLGHWPEV*HVAPAQRVGGRQDS
Trigger: TGAGTCCTGACGGCCTCCCACTCTTTGGGCAGGGGCGACATGGCACACCTCTGGCCAATGCCCAAGATAAGCCAATTTTGAGTCTTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp TTAGGGCAGCCCTGTAGACTGGTTGGCTCCGGCCCTGAGAGTTCATaGACTGCAGGGAGACCACATACACGGATTCCGAGGCTAGCTTTT +
Preference number: 5 (lower is better)
Translates to: LGQPCRLVGSGPESS*TAGRPHTRIPRLAF
Trigger: AAAAGCTAGCCTCGGAATCCGTGTATGTGGTCTCCCTGCAGTCCATGAACTCTCAGGGCCGGAGCCAACCAGTCTACAGGGCTGCCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp GATGACCTCCAAGCCCACCAGCGGCTTTCCTCCAAGACTCAAAATTaGCTTATCTTGGGCATTGGCCAGAGGTGTGCCATGTCGCCCCTG +
Preference number: 5 (lower is better)
Translates to: DDLQAHQRLSSKTQN*LILGIGQRCAMSPL
Trigger: CAGGGGCGACATGGCACACCTCTGGCCAATGCCCAAGATAAGCCAATTTTGAGTCTTGGAGGAAAGCCGCTGGTGGGCTTGGAGGTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTAGCCCTGTAGACTGGTaGGCTCCGGCCCTGAGAGTT +
Preference number: 5 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASSPVDW*APALRV
Trigger: AACTCTCAGGGCCGGAGCCAACCAGTCTACAGGGCT...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp CTTTGCTCACAGCCCCTAGTGCGACTTAGTTGGTGGGGCTGGGCAGGGCAAGCTACTGTAGGTTTGCCATaGACTGGCCAGACGTTCAAG +
Preference number: 5 (lower is better)
Translates to: LCSQPLVRLSWWGWAGQATVGLP*TGQTFK
Trigger: CTTGAACGTCTGGCCAGTCAATGGCAAACCTACAGT...AGCTTGCCCTGCCCAGCCCCACCAACTAAGTCGCACTAGGGGCTGTGAGCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTCCATCCTTCCCGCCCTaGGAAAGTGGAGAGCTCAGG +
Preference number: 5 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASPSFPP*ESGELR
Trigger: CCTGAGCTCTCCACTTTCCAAGGGCGGGAAGGATGG...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTAACCGACTGCTGGGACTaGGAGGACAGGGGCCGCTTG +
Preference number: 5 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLTDCWD*EDRGRL
Trigger: CAAGCGGCCCCTGTCCTCCAAGTCCCAGCAGTCGGT...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 90 bp TGCTCTGTTGAACATCCTGAGCCTTGGAGGCCAGGGAGGAGTACTTaGCCTGAGGATGTGTATCTGCCCCTGTGGATTTGGGGTTCTCTG +
Preference number: 5 (lower is better)
Translates to: CSVEHPEPWRPGRST*PEDVYLPLWIWGSL
Trigger: CAGAGAACCCCAAATCCACAGGGGCAGATACACATCCTCAGGGCAAGTACTCCTCCCTGGCCTCCAAGGCTCAGGATGTTCAACAGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp AAGCCCACCAGCGGCTTTCCTCCAAGACTCAAAATTGGCTTATCTTaGGCATTGGCCAGAGGTGTGCCATGTCGCCCCTGCCCAAAGAGT +
Preference number: 5 (lower is better)
Translates to: KPTSGFPPRLKIGLS*ALARGVPCRPCPKS
Trigger: ACTCTTTGGGCAGGGGCGACATGGCACACCTCTGGCCAATGCCCAAGATAAGCCAATTTTGAGTCTTGGAGGAAAGCCGCTGGTGGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp GCAAGCTTGCAGCATGACGGTCCTGTGATTACCACTTTCCAGGGATaGAGACCCCACACTCGTACCAGCCCACATAGTAGTAGGGGGTTC +
Preference number: 5 (lower is better)
Translates to: ASLQHDGPVITTFQG*RPHTRTSPHSSRGF
Trigger: GAACCCCCTACTACTATGTGGGCTGGTACGAGTGTGGGGTCTCCATCCCTGGAAAGTGGTAATCACAGGACCGTCATGCTGCAAGCTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp TCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGGCTGTCTTTCTGAAATCTTTCGCTTaGTTAGGGCAGCCCTGTAGA +
Preference number: 5 (lower is better)
Translates to: SMTFLAPRAAGLSTLAVFLKSFA*LGQPCR
Trigger: TCTACAGGGCTGCCCTAACAAAGCGAAAGATTTCAG...AAAGACAGCCAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp CATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACAGGAGGGGGCTGCTGTaGTGGGGCCCGGCCGGGTGT +
Preference number: 5 (lower is better)
Translates to: HVAFHEARTACICYSWKYRRGLL*WGPAGC
Trigger: ACACCCGGCCGGGCCCCACAACAGCAGCCCCCTCCT...GTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp ACAGCAAAACTGAATCCTGTTCATTGTCCAGGCCAAGAAGTGGGACTGAGTTCCTCCACCTGCTGGTGCTaGGGAAGGGACGCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: TAKLNPVHCPGQEVGLSSSTCWC*GRDAAA
Trigger: GGCAGCTGCGTCCCTTCCCAAGCACCAGCAGGTGGA...GGAACTCAGTCCCACTTCTTGGCCTGGACAATGAACAGGATTCAGTTTTGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTCGCACACGCAAGGGCTaGTTGGGCACTTCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASRTRKG*LGTSFS
Trigger: AGAAAAGGAAGTGCCCAACAAGCCCTTGCGTGTGCG...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp CAGTGTCCATCTATGACCTTCCTGGCACCTAGGGCAGCGGGGCTGAGCACGCTGAACCCACTTTGTTCCTaGAGGGCCATTGATAATTCT +
Preference number: 5 (lower is better)
Translates to: QCPSMTFLAPRAAGLSTLNPLCS*RAIDNS
Trigger: AGAATTATCAATGGCCCTCAAGGAACAAAGTGGGTT...CAGCGTGCTCAGCCCCGCTGCCCTAGGTGCCAGGAAGGTCATAGATGGACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTTCTCCTGGGGTGGCTTaGTCCCAGTCCACAATGACA +
Preference number: 5 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASSPGVA*SQSTMT
Trigger: TGTCATTGTGGACTGGGACAAAGCCACCCCAGGAGA...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS TCA 90 bp GAGCATGCTGGGGAGGCAGGTCACTCTTCTTCAGGTCATTGGGGATaGTTTCATCCAGGCTGTCCACTTGGAAGTGATCCAGTGCATCAG +
Preference number: 5 (lower is better)
Translates to: EHAGEAGHSSSGHWG*FHPGCPLGSDPVHQ
Trigger: CTGATGCACTGGATCACTTCCAAGTGGACAGCCTGGATGAAATCATCCCCAATGACCTGAAGAAGAGTGACCTGCCTCCCCAGCATGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS TCA 90 bp TTTCCCCGCGACGGGGCAAGCTTCCAGGAGCCCTCCTCCTCACGGTaGTCTCTTACATCATTCACGGTAGCAAGTCTAGTGCTTTATATG +
Preference number: 5 (lower is better)
Translates to: FPRDGASFQEPSSSR*SLTSFTVASLVLYM
Trigger: CATATAAAGCACTAGACTTGCTACCGTGAATGATGTAAGAGATCACCGTGAGGAGGAGGGCTCCTGGAAGCTTGCCCCGTCGCGGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480856.1
CDS GCA 90 bp GCTTTCAGCTCTGTAAACAGGACGGCTCACTCCACTGTGGTTTTCTaGAGTAAGCAGCACAAAGTACACTACCCCCGGCTCCACATCCTC +
Preference number: 5 (lower is better)
Translates to: AFSSVNRTAHSTVVF*SKQHKVHYPRLHIL
Trigger: GAGGATGTGGAGCCGGGGGTAGTGTACTTTGTGCTGCTTACTGCAGAAAACCACAGTGGAGTGAGCCGTCCTGTTTACAGAGCTGAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp CAGATCAAATTCTTCTTCAGGAAAGGAACTGATGGCGCCTTCCTCTaGGATCACCCTCGGTGTGGTAGCAGTGGTCGAAGGCTCAGTGGT +
Preference number: 5 (lower is better)
Translates to: QIKFFFRKGTDGAFL*DHPRCGSSGRRLSG
Trigger: ACCACTGAGCCTTCGACCACTGCTACCACACCGAGGGTGATCCCAGAGGAAGGCGCCATCAGTTCCTTTCCTGAAGAAGAATTTGATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp ACAGCAAAACTGAATCCTGTTCATTGTCCAGGCCAAGAAGTGGGACTGAGTTCCGATCTGCGTGGACTCTaGGCTCCAGACAGGCGTGGT +
Preference number: 5 (lower is better)
Translates to: TAKLNPVHCPGQEVGLSSDLRGL*APDRRG
Trigger: ACCACGCCTGTCTGGAGCCAAGAGTCCACGCAGATC...GGAACTCAGTCCCACTTCTTGGCCTGGACAATGAACAGGATTCAGTTTTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTAGGAAGAGGGCCACTTaGGCACAGAGGAAGACAGAA +
Preference number: 5 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASRKRAT*AQRKTE
Trigger: TTCTGTCTTCCTCTGTGCCAAAGTGGCCCTCTTCCT...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp CATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACGGCTCCCTCTCTTCCTaGGCGAGGCTCCCATCGGCG +
Preference number: 5 (lower is better)
Translates to: HVAFHEARTACICYSWKYGSLSS*ARLPSA
Trigger: CGCCGATGGGAGCCTCGCCAAGGAAGAGAGGGAGCC...GTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTACGTGCGCTTCACATATaGCCGTCCATGGCAGTCCGT +
Preference number: 5 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLRALHI*PSMAVR
Trigger: ACGGACTGCCATGGACGGCAATATGTGAAGCGCACG...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS TCA 90 bp TCCGCCTTACTGGTTGTTGGCATAGCGACAATGAAGGCTTTGGAGTaGGGTCCCAGGCCTCTCCTGTTTGTGGCCCGGATTTTGAAAAGA +
Preference number: 5 (lower is better)
Translates to: SALLVVGIATMKALE*GPRPLLFVARILKR
Trigger: TCTTTTCAAAATCCGGGCCACAAACAGGAGAGGCCTGGGACCTCACTCCAAAGCCTTCATTGTCGCTATGCCAACAACCAGTAAGGCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297267.14
CDS GCA 90 bp TGGCCTCTCTGGTATAAACGGCTTGAAAATCCCATGCAGGATAAGTaGGTAGACAGGCTTCCCATGACACGGCAGGTCCATTCCAACACC +
Preference number: 5 (lower is better)
Translates to: WPLWYKRLENPMQDK*VDRLPMTRQVHSNT
Trigger: GGTGTTGGAATGGACCTGCCGTGTCATGGGAAGCCTGTCTACGCACTTATCCTGCATGGGATTTTCAAGCCGTTTATACCAGAGAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480856.1
CDS CCA 90 bp AGCCTGAGAACTCATCTTCTTCAGCGTAGCACTCTGGGATCCCATTaGAGCTCATTATCAGGTTGCCATCATCGTCGTGCCGTTCCAAGG +
Preference number: 5 (lower is better)
Translates to: SLRTHLLQRSTLGSH*SSLSGCHHRRAVPR
Trigger: CCTTGGAACGGCACGACGATGATGGCAACCTGATAATGAGCTCCAATGGGATCCCAGAGTGCTACGCTGAAGAAGATGAGTTCTCAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp CATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTCCACCTGCTGGTGCTaGGGAAGGGACGCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: HVAFHEARTACICYSWKYSTCWC*GRDAAA
Trigger: GGCAGCTGCGTCCCTTCCCAAGCACCAGCAGGTGGA...GTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCACCGACTGCTGGGACTaGGAGGACAGGGGCCGCTTG +
Preference number: 5 (lower is better)
Translates to: EKNRKHVAFHEARTACICTDCWD*EDRGRL
Trigger: CAAGCGGCCCCTGTCCTCCAAGTCCCAGCAGTCGGT...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTAGGCTTATCTTGGGCATaGGCCAGAGGTGTGCCATGT +
Preference number: 5 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLGLSWA*ARGVPC
Trigger: ACATGGCACACCTCTGGCCAATGCCCAAGATAAGCC...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTCACTCTGGGATCCCATaGGAGCTCATTATCAGGTTG +
Preference number: 5 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASHSGIP*ELIIRL
Trigger: CAACCTGATAATGAGCTCCAATGGGATCCCAGAGTG...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp AAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGGCCACCACGGTGATGTaGCGGGGAGCATGCTGGGGA +
Preference number: 5 (lower is better)
Translates to: KSLEITLNQLLVSDVSGMATTVM*RGACWG
Trigger: TCCCCAGCATGCTCCCCGCAACATCACCGTGGTGGC...CATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTACTGAATCCTGTTCATaGTCCAGGCCAAGAAGTGGG +
Preference number: 5 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASTESCS*SRPRSG
Trigger: CCCACTTCTTGGCCTGGACAATGAACAGGATTCAGT...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS TCA 90 bp GAGGGCTTCTACATAGGACTGAGGCCCTGTTCTTCCATCAAGGTGTaGATCCACAAATTGGCAATGGTCTTCACCTCTTCCCCAGCTGTC +
Preference number: 5 (lower is better)
Translates to: EGFYIGLRPCSSIKV*IHKLAMVFTSSPAV
Trigger: GACAGCTGGGGAAGAGGTGAAGACCATTGCCAATTTGTGGATTCACACCTTGATGGAAGAACAGGGCCTCAGTCCTATGTAGAAGCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp AAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGGATGGCGCATTGGAGTaGGTGGCTGGGGCGTCCTCA +
Preference number: 5 (lower is better)
Translates to: KSLEITLNQLLVSDVSGMDGALE*VAGASS
Trigger: TGAGGACGCCCCAGCCACCAACTCCAATGCGCCATC...CATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTGACCGTGATGGCGCATaGGAGTTGGTGGCTGGGGCG +
Preference number: 5 (lower is better)
Translates to: VRISCLKSLEITLNQLLVDRDGA*ELVAGA
Trigger: CGCCCCAGCCACCAACTCCAATGCGCCATCACGGTC...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTTCTGCCATTATAACCTaGTCTGTAAGAGGGTCTGGC +
Preference number: 5 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASSAIIT*SVRGSG
Trigger: GCCAGACCCTCTTACAGACAAGGTTATAATGGCAGA...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTAGAGCTCATTATCAGGTaGCCATCATCGTCGTGCCGT +
Preference number: 5 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLELIIR*PSSSCR
Trigger: ACGGCACGACGATGATGGCAACCTGATAATGAGCTC...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTAATCCAGGCTGTCCACTaGGAAGTGATCCAGTGCATC +
Preference number: 5 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLIQAVH*EVIQCI
Trigger: GATGCACTGGATCACTTCCAAGTGGACAGCCTGGAT...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTCTCTTCTTCAGGTCATaGGGGATGATTTCATCCAGG +
Preference number: 5 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASLFFRS*GMISSR
Trigger: CCTGGATGAAATCATCCCCAATGACCTGAAGAAGAG...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGCCACCACGGTGATGTaGCGGGGAGCATGCTGGGGA +
Preference number: 5 (lower is better)
Translates to: SVRISCLKSLEITLNQLLATTVM*RGACWG
Trigger: TCCCCAGCATGCTCCCCGCAACATCACCGTGGTGGC...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp AGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTGAAGTGTCCGAATTTCCTGGGCAGGGCAAGCTaGCAGCATGACGGTCCTGTG +
Preference number: 5 (lower is better)
Translates to: SKNSVHMLFLEILKCPNFLGRAS*QHDGPV
Trigger: CACAGGACCGTCATGCTGCAAGCTTGCCCTGCCCAG...GAAATTCGGACACTTCAGTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS TCA 90 bp TTTTTCCAGAACAGGATCCACCCAGGACACAAGCACAGACTGAGATaGCATAACCCGGACGCTGATGTCGTCAGGTACATCCAATTCGTC +
Preference number: 5 (lower is better)
Translates to: FFQNRIHPGHKHRLR*HNPDADVVRYIQFV
Trigger: GACGAATTGGATGTACCTGACGACATCAGCGTCCGGGTTATGTCATCTCAGTCTGTGCTTGTGTCCTGGGTGGATCCTGTTCTGGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297267.14
ENST00000329629.8
ENST00000480856.1
CDS CCA 90 bp GGCAATGTTGTAATGCTCCACAGGTCTACTGGTAGCATCTTTGGGTaGGTCCCACGTGACTTTCAGGCCCATTTTAGTGGACAGCAGTTT +
Preference number: 5 (lower is better)
Translates to: GNVVMLHRSTGSIFG*VPRDFQAHFSGQQF
Trigger: AAACTGCTGTCCACTAAAATGGGCCTGAAAGTCACGTGGGACCCACCCAAAGATGCTACCAGTAGACCTGTGGAGCATTACAACATTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGCACGGTGTACTGTCTaGATGCAACAACTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASARCTV*MQQLSS
Trigger: AGAAGAAAGTTGTTGCATCAAGACAGTACACCGTGC...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTAGTGGCCGTGTCTACTaGGCGGCCTCAGGGTCCGTT +
Preference number: 5 (lower is better)
Translates to: VRISCLKSLEITLNQLLVSGRVY*AASGSV
Trigger: AACGGACCCTGAGGCCGCCAAGTAGACACGGCCACT...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp CATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACCCATCCTTCCCGCCCTaGGAAAGTGGAGAGCTCAGG +
Preference number: 5 (lower is better)
Translates to: HVAFHEARTACICYSWKYPSFPP*ESGELR
Trigger: CCTGAGCTCTCCACTTTCCAAGGGCGGGAAGGATGG...GTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTGATGGCGCATTGGAGTaGGTGGCTGGGGCGTCCTCA +
Preference number: 5 (lower is better)
Translates to: VRISCLKSLEITLNQLLVDGALE*VAGASS
Trigger: TGAGGACGCCCCAGCCACCAACTCCAATGCGCCATC...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTTCGGACTGTGGTTGTaGGACGCCTGGTGGTCGTGC +
Preference number: 5 (lower is better)
Translates to: EKNRKHVAFHEARTACICFGLWL*DAWWSC
Trigger: GCACGACCACCAGGCGTCCAACAACCACAGTCCGAA...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp AGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTGAAGTGTCCGAATTTCTGGTTCGGACTGTGGTaGTTGGACGCCTGGTGGTCG +
Preference number: 5 (lower is better)
Translates to: SKNSVHMLFLEILKCPNFWFGLW*LDAWWS
Trigger: CGACCACCAGGCGTCCAACAACCACAGTCCGAACCA...GAAATTCGGACACTTCAGTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp CATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTGGTTCGGACTGTGGTaGTTGGACGCCTGGTGGTCG +
Preference number: 5 (lower is better)
Translates to: HVAFHEARTACICYSWKYWFGLW*LDAWWS
Trigger: CGACCACCAGGCGTCCAACAACCACAGTCCGAACCA...GTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTCTGGGCAGGGCAAGCTaGCAGCATGACGGTCCTGTG +
Preference number: 5 (lower is better)
Translates to: VRISCLKSLEITLNQLLVLGRAS*QHDGPV
Trigger: CACAGGACCGTCATGCTGCAAGCTTGCCCTGCCCAG...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGATCTGCGTGGACTCTaGGCTCCAGACAGGCGTGGT +
Preference number: 5 (lower is better)
Translates to: SVRISCLKSLEITLNQLLDLRGL*APDRRG
Trigger: ACCACGCCTGTCTGGAGCCAAGAGTCCACGCAGATC...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTGTCCGTTCATCTCTaGTCAGTGGAACATAATTCA +
Preference number: 5 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASVSVHL*SVEHNS
Trigger: TGAATTATGTTCCACTGACAAGAGATGAACGGACAC...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGAGCCCTGTAGACTGGTaGGCTCCGGCCCTGAGAGTT +
Preference number: 5 (lower is better)
Translates to: SVRISCLKSLEITLNQLLSPVDW*APALRV
Trigger: AACTCTCAGGGCCGGAGCCAACCAGTCTACAGGGCT...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp AGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCCATCTACTGAAATCTTTCGCTTaGTTAGGGCAGCCCTGTAGA +
Preference number: 5 (lower is better)
Translates to: RSGTEFQTEMTRMASVHLLKSFA*LGQPCR
Trigger: TCTACAGGGCTGCCCTAACAAAGCGAAAGATTTCAG...TAGATGGACACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp ACAGCAAAACTGAATCCTGTTCATTGTCCAGGCCAAGAAGTGGGACTGAGTTCCACTGTAGGTTTGCCATaGACTGGCCAGACGTTCAAG +
Preference number: 5 (lower is better)
Translates to: TAKLNPVHCPGQEVGLSSTVGLP*TGQTFK
Trigger: CTTGAACGTCTGGCCAGTCAATGGCAAACCTACAGT...GGAACTCAGTCCCACTTCTTGGCCTGGACAATGAACAGGATTCAGTTTTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp AGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTGAAGTGTCCGAATTTCAGCTCCTCTGCCTTCTaGGCGCGAAGCTGGGGTTTT +
Preference number: 5 (lower is better)
Translates to: SKNSVHMLFLEILKCPNFSSSAF*ARSWGF
Trigger: AAAACCCCAGCTTCGCGCCAAGAAGGCAGAGGAGCT...GAAATTCGGACACTTCAGTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCGAAGGCACGTGGTCATaGACAACGGTGGCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: EKNRKHVAFHEARTACICEGTWS*TTVAGS
Trigger: GCTTCCTGCCACCGTTGTCAATGACCACGTGCCTTC...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGTTCGGACTGTGGTTGTaGGACGCCTGGTGGTCGTGC +
Preference number: 5 (lower is better)
Translates to: SVRISCLKSLEITLNQLLFGLWL*DAWWSC
Trigger: GCACGACCACCAGGCGTCCAACAACCACAGTCCGAA...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp CATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACCTACTGGTAGCATCTTaGGGTGGGTCCCACGTGACT +
Preference number: 5 (lower is better)
Translates to: HVAFHEARTACICYSWKYLLVAS*GGSHVT
Trigger: AGTCACGTGGGACCCACCCAAAGATGCTACCAGTAG...GTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp TCCAGGCCAAGAAGTGGGACTGAGTTCCAGACTGAGATGACCAGAATGGCCAGTGTCTCCGCATTCACCTaGATGTATTTAAGACTTTTC +
Preference number: 5 (lower is better)
Translates to: SRPRSGTEFQTEMTRMASVSAFT*MYLRLF
Trigger: GAAAAGTCTTAAATACATCAAGGTGAATGCGGAGAC...ACTGGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCGCGACAACTGTAGGTTaGCCATTGACTGGCCAGACG +
Preference number: 5 (lower is better)
Translates to: EKNRKHVAFHEARTACICATTVG*PLTGQT
Trigger: CGTCTGGCCAGTCAATGGCAAACCTACAGTTGTCGC...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCGAGTCCACCAAGTCGTaGTCATTCAAGCTGGCAGGC +
Preference number: 5 (lower is better)
Translates to: EKNRKHVAFHEARTACICESTKS*SFKLAG
Trigger: GCCTGCCAGCTTGAATGACAACGACTTGGTGGACTC...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp GAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTGCTATTACCTTGGAGACCTCCCGTaGGCAGCAAAGGGTTTGTGT +
Preference number: 5 (lower is better)
Translates to: EITLNQLLVSDVSGMCYYLGDLP*AAKGLC
Trigger: ACACAAACCCTTTGCTGCCAACGGGAGGTCTCCAAG...GTAATAGCACATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp AGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTGAAGTGTCCGAATTTCCGCGTCTGTGCTCTGTaGAACATCCTGAGCCTTGGA +
Preference number: 5 (lower is better)
Translates to: SKNSVHMLFLEILKCPNFRVCAL*NILSLG
Trigger: TCCAAGGCTCAGGATGTTCAACAGAGCACAGACGCG...GAAATTCGGACACTTCAGTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp GAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTGCTATTACAAGGCTCAGTGGTGGTaGGTGGCCTTGACGTCTCAA +
Preference number: 5 (lower is better)
Translates to: EITLNQLLVSDVSGMCYYKAQWW*VALTSQ
Trigger: TTGAGACGTCAAGGCCACCAACCACCACTGAGCCTT...GTAATAGCACATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp CATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACGCAGTTTCACATGCCTaGGCTTCAGTGGGTGGTCAA +
Preference number: 5 (lower is better)
Translates to: HVAFHEARTACICYSWKYAVSHA*ASVGGQ
Trigger: TTGACCACCCACTGAAGCCAAGGCATGTGAAACTGC...GTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297267.14
CDS-3UTR CAA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCACACGCAAGGGCTTGTaGGGCACTTCCTTTTCTGTG +
Preference number: 5 (lower is better)
Translates to: EKNRKHVAFHEARTACICTRKGL*GTSFSV
Trigger: CACAGAAAAGGAAGTGCCCAACAAGCCCTTGCGTGT...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGCGCACACGCAAGGGCTaGTTGGGCACTTCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: SVRISCLKSLEITLNQLLRTRKG*LGTSFS
Trigger: AGAAAAGGAAGTGCCCAACAAGCCCTTGCGTGTGCG...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGCGACAACTGTAGGTTaGCCATTGACTGGCCAGACG +
Preference number: 5 (lower is better)
Translates to: SVRISCLKSLEITLNQLLATTVG*PLTGQT
Trigger: CGTCTGGCCAGTCAATGGCAAACCTACAGTTGTCGC...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTCTTGGAGACCTCCCGTaGGCAGCAAAGGGTTTGTGT +
Preference number: 5 (lower is better)
Translates to: VRISCLKSLEITLNQLLVLGDLP*AAKGLC
Trigger: ACACAAACCCTTTGCTGCCAACGGGAGGTCTCCAAG...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGCGCGTCTGTGCTCTGTaGAACATCCTGAGCCTTGGA +
Preference number: 5 (lower is better)
Translates to: SVRISCLKSLEITLNQLLRVCAL*NILSLG
Trigger: TCCAAGGCTCAGGATGTTCAACAGAGCACAGACGCG...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp GAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTGCTATTACAGGAAGAGGGCCACTTaGGCACAGAGGAAGACAGAA +
Preference number: 5 (lower is better)
Translates to: EITLNQLLVSDVSGMCYYRKRAT*AQRKTE
Trigger: TTCTGTCTTCCTCTGTGCCAAAGTGGCCCTCTTCCT...GTAATAGCACATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGGCTTATCTTGGGCATaGGCCAGAGGTGTGCCATGT +
Preference number: 5 (lower is better)
Translates to: SVRISCLKSLEITLNQLLGLSWA*ARGVPC
Trigger: ACATGGCACACCTCTGGCCAATGCCCAAGATAAGCC...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp AAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGGAGCTCATTATCAGGTaGCCATCATCGTCGTGCCGT +
Preference number: 5 (lower is better)
Translates to: KSLEITLNQLLVSDVSGMELIIR*PSSSCR
Trigger: ACGGCACGACGATGATGGCAACCTGATAATGAGCTC...CATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp GAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTGCTATTACATCCAGGCTGTCCACTaGGAAGTGATCCAGTGCATC +
Preference number: 5 (lower is better)
Translates to: EITLNQLLVSDVSGMCYYIQAVH*EVIQCI
Trigger: GATGCACTGGATCACTTCCAAGTGGACAGCCTGGAT...GTAATAGCACATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTCCTGGGGTGGCTTaGTCCCAGTCCACAATGACA +
Preference number: 5 (lower is better)
Translates to: VRISCLKSLEITLNQLLVSPGVA*SQSTMT
Trigger: TGTCATTGTGGACTGGGACAAAGCCACCCCAGGAGA...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp AAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGCTGGCGATAGTAGCCTaGAATAGTAGGGAGGGCTTC +
Preference number: 5 (lower is better)
Translates to: KSLEITLNQLLVSDVSGMLAIVA*NSREGF
Trigger: GAAGCCCTCCCTACTATTCAAGGCTACTATCGCCAG...CATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp CTTGTTGGGCACTTCCTTTTCTGTGACGGTTTCATTAAATGGTCCTaGACCCTTAATGGGAAAACCATCAATCTCGATCCATTCACCTCC +
Preference number: 5 (lower is better)
Translates to: LVGHFLFCDGFIKWS*TLNGKTINLDPFTS
Trigger: GGAGGTGAATGGATCGAGATTGATGGTTTTCCCATTAAGGGTCCAGGACCATTTAATGAAACCGTCACAGAAAAGGAAGTGCCCAACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp AAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTTTGCTCCAAATGGTTaGAGAGCCGGGGCGTATGAA +
Preference number: 5 (lower is better)
Translates to: KSLEITLNQLLVSDVSGMFAPNG*RAGAYE
Trigger: TTCATACGCCCCGGCTCTCAAACCATTTGGAGCAAA...CATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297267.14
CDS-3UTR CAA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCCACTCTGGGATCCCATaGGAGCTCATTATCAGGTTG +
Preference number: 5 (lower is better)
Translates to: EKNRKHVAFHEARTACICHSGIP*ELIIRL
Trigger: CAACCTGATAATGAGCTCCAATGGGATCCCAGAGTG...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCACTGAATCCTGTTCATaGTCCAGGCCAAGAAGTGGG +
Preference number: 5 (lower is better)
Translates to: NRKHVAFHEARTACICYSTESCS*SRPRSG
Trigger: CCCACTTCTTGGCCTGGACAATGAACAGGATTCAGT...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 90 bp CCATCTCCTCCTAGTTTAATCCGAAGAGGATTTCCATGTGAATCTTaGAGGTACCTTCCTTCTGCATTCAATACTAACCCACGATCAAGG +
Preference number: 5 (lower is better)
Translates to: PSPPSLIRRGFPCES*RYLPSAFNTNPRSR
Trigger: CCTTGATCGTGGGTTAGTATTGAATGCAGAAGGAAGGTACCTCCAAGATTCACATGGAAATCCTCTTCGGATTAAACTAGGAGGAGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp AAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGACTGACGTACTCCATTaGCCATCTCTTTCACCCTGT +
Preference number: 5 (lower is better)
Translates to: KSLEITLNQLLVSDVSGMTDVLH*PSLSPC
Trigger: ACAGGGTGAAAGAGATGGCAAATGGAGTACGTCAGT...CATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGTCAAGAAGAAGGTCCTaGGCATTTCTCCCTTGGGGA +
Preference number: 5 (lower is better)
Translates to: SVRISCLKSLEITLNQLLSRRRS*AFLPWG
Trigger: TCCCCAAGGGAGAAATGCCAAGGACCTTCTTCTTGA...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCAAGAAGAAGGTCCTaGGCATTTCTCCCTTGGGGA +
Preference number: 5 (lower is better)
Translates to: VRISCLKSLEITLNQLLVSRRRS*AFLPWG
Trigger: TCCCCAAGGGAGAAATGCCAAGGACCTTCTTCTTGA...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp AGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACTGAAGTGTCCGAATTTCTTGGCAGCAAAGGGTTaGTGTCTGAGCAAATGGAAG +
Preference number: 5 (lower is better)
Translates to: SKNSVHMLFLEILKCPNFLAAKG*CLSKWK
Trigger: CTTCCATTTGCTCAGACACAAACCCTTTGCTGCCAA...GAAATTCGGACACTTCAGTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp AAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGCAAAATTGGCTTATCTaGGGCATTGGCCAGAGGTGT +
Preference number: 5 (lower is better)
Translates to: KSLEITLNQLLVSDVSGMQNWLI*GIGQRC
Trigger: ACACCTCTGGCCAATGCCCAAGATAAGCCAATTTTG...CATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCCAAAATTGGCTTATCTaGGGCATTGGCCAGAGGTGT +
Preference number: 5 (lower is better)
Translates to: EKNRKHVAFHEARTACICQNWLI*GIGQRC
Trigger: ACACCTCTGGCCAATGCCCAAGATAAGCCAATTTTG...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp GAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTGCTATTACCTCTTCTTCAGGTCATaGGGGATGATTTCATCCAGG +
Preference number: 5 (lower is better)
Translates to: EITLNQLLVSDVSGMCYYLFFRS*GMISSR
Trigger: CCTGGATGAAATCATCCCCAATGACCTGAAGAAGAG...GTAATAGCACATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS TCA 90 bp GGAGTATGTCTCCGCATTCACCTTGATGTATTTAAGACTTTTCAGTaGCTTCCCATAGGCAATGTTGTAATGCTCCACAGGTCTACTGGT +
Preference number: 5 (lower is better)
Translates to: GVCLRIHLDVFKTFQ*LPIGNVVMLHRSTG
Trigger: ACCAGTAGACCTGTGGAGCATTACAACATTGCCTATGGGAAGTCACTGAAAAGTCTTAAATACATCAAGGTGAATGCGGAGACATACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCGCACGGTGTACTGTCTaGATGCAACAACTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: NRKHVAFHEARTACICYSARCTV*MQQLSS
Trigger: AGAAGAAAGTTGTTGCATCAAGACAGTACACCGTGC...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp AGTGTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGACTGACGTACTCCATTaGCCATCTCTTTCACCCTGT +
Preference number: 5 (lower is better)
Translates to: SVRISCLKSLEITLNQLLTDVLH*PSLSPC
Trigger: ACAGGGTGAAAGAGATGGCAAATGGAGTACGTCAGT...CAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp GTCCGAATTTCATGCCTAAAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGCCATTATAACCTaGTCTGTAAGAGGGTCTGGC +
Preference number: 5 (lower is better)
Translates to: VRISCLKSLEITLNQLLVSAIIT*SVRGSG
Trigger: GCCAGACCCTCTTACAGACAAGGTTATAATGGCAGA...AACCAGCAACTGATTCAGTGTGATTTCCAGACTTTTTAGGCATGAAATTCGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCCTCCAAGACTCAAAATaGGCTTATCTTGGGCATTGG +
Preference number: 5 (lower is better)
Translates to: NRKHVAFHEARTACICYSLQDSK*AYLGHW
Trigger: CCAATGCCCAAGATAAGCCAATTTTGAGTCTTGGAG...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp GAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTGCTATTACCTCCAAGACTCAAAATaGGCTTATCTTGGGCATTGG +
Preference number: 5 (lower is better)
Translates to: EITLNQLLVSDVSGMCYYLQDSK*AYLGHW
Trigger: CCAATGCCCAAGATAAGCCAATTTTGAGTCTTGGAG...GTAATAGCACATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp AAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGTGGTGGTTGGTGGCCTaGACGTCTCAAATTCATAAT +
Preference number: 5 (lower is better)
Translates to: KSLEITLNQLLVSDVSGMWWLVA*TSQIHN
Trigger: ATTATGAATTTGAGACGTCAAGGCCACCAACCACCA...CATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCGTGTCCGTTCATCTCTaGTCAGTGGAACATAATTCA +
Preference number: 5 (lower is better)
Translates to: NRKHVAFHEARTACICYSVSVHL*SVEHNS
Trigger: TGAATTATGTTCCACTGACAAGAGATGAACGGACAC...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCGTCTCCGCATTCACCTaGATGTATTTAAGACTTTTC +
Preference number: 5 (lower is better)
Translates to: EKNRKHVAFHEARTACICVSAFT*MYLRLF
Trigger: GAAAAGTCTTAAATACATCAAGGTGAATGCGGAGAC...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp GAGAAAAACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCCTTTCCCTTCTACATTaGGTCTGCCATTATAACCTT +
Preference number: 5 (lower is better)
Translates to: EKNRKHVAFHEARTACICLSLLH*VCHYNL
Trigger: AAGGTTATAATGGCAGACCAAATGTAGAAGGGAAAG...GCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTTTTTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp CATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCTGGAAATACCTTTCCCTTCTACATTaGGTCTGCCATTATAACCTT +
Preference number: 5 (lower is better)
Translates to: HVAFHEARTACICYSWKYLSLLH*VCHYNL
Trigger: AAGGTTATAATGGCAGACCAAATGTAGAAGGGAAAG...GTATTTCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp AAAAGTCTGGAAATCACACTGAATCAGTTGCTGGTTTCTGATGTCTCTGGGATGGTAGCCATGAGGATTTaGTGCTTGCACTTTAAAATA +
Preference number: 5 (lower is better)
Translates to: KSLEITLNQLLVSDVSGMVAMRI*CLHFKI
Trigger: TATTTTAAAGTGCAAGCACAAAATCCTCATGGCTAC...CATCCCAGAGACATCAGAAACCAGCAACTGATTCAGTGTGATTTCCAGACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS-3UTR CAA 90 bp AACAGAAAGCATGTAGCATTCCATGAAGCAAGAACAGCGTGCATATGCTATTCCGTAGCCATGAGGATTTaGTGCTTGCACTTTAAAATA +
Preference number: 5 (lower is better)
Translates to: NRKHVAFHEARTACICYSVAMRI*CLHFKI
Trigger: TATTTTAAAGTGCAAGCACAAAATCCTCATGGCTAC...GGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGCTTTCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp TGGAAGGAGGCTCCGACTTCCCCGGCGCTGCCCTGCTaGGTACCCGGGCGCGGGACTGGGGGCCGCCGGGTC +
Preference number: 6 (lower is better)
Translates to: WKEAPTSPALPC*VPGRGTGGRRV
Trigger: GACCCGGCGGCCCCCAGTCCCGCGCCCGGGTACCCAGCAGGGCAGCGCCGGGGAAGTCGGAGCCTCCTTCCA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 72 bp GGCCGGGCCCGCAGCGTCTGGGCCGTGGCCTCCGCCTaGCTTCCGCCGTCTTCCCTATCGCCGTCACCGTGG +
Preference number: 6 (lower is better)
Translates to: GRARSVWAVASA*LPPSSLSPSPW
Trigger: CCACGGTGACGGCGATAGGGAAGACGGCGGAAGGCAGGCGGAGGCCACGGCCCAGACGCTGCGGGCCCGGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp CCTGCTGGTGCTTGGGAAGGGACGCAGCTGCCTCCTTaGCGCGCGCGGCGTGCGCGGGGGCCCGCACATCCT +
Preference number: 6 (lower is better)
Translates to: PAGAWEGTQLPP*RARRARGPAHP
Trigger: AGGATGTGCGGGCCCCCGCGCACGCCGCGCGCGCCAAGGAGGCAGCTGCGTCCCTTCCCAAGCACCAGCAGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CAA 90 bp GGAGACTCCACCTGCTGGTGCTTGGGAAGGGACGCAGCTGCCTCCTaGGCGCGCGCGGCGTGCGCGGGGGCCCGCACATCCTGGGCCTCG +
Preference number: 6 (lower is better)
Translates to: GDSTCWCLGRDAAAS*ARAACAGARTSWAS
Trigger: CGAGGCCCAGGATGTGCGGGCCCCCGCGCACGCCGCGCGCGCCAAGGAGGCAGCTGCGTCCCTTCCCAAGCACCAGCAGGTGGAGTCTCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CAA 90 bp TCGCCACCTGCCCCTGCGCCTGTGGGAGACTCCACCTGCTGGTGCTaGGGAAGGGACGCAGCTGCCTCCTTGGCGCGCGCGGCGTGCGCG +
Preference number: 6 (lower is better)
Translates to: SPPAPAPVGDSTCWC*GRDAAASLARAACA
Trigger: CGCGCACGCCGCGCGCGCCAAGGAGGCAGCTGCGTCCCTTCCCAAGCACCAGCAGGTGGAGTCTCCCACAGGCGCAGGGGCAGGTGGCGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 72 bp GTCCTCCGGGCCGGCGAGGCTGGCTTTGCGCCGGGGTaGACAGAGCTTCTGTCGCGGAGAACGCTGGACGGG +
Preference number: 6 (lower is better)
Translates to: VLRAGEAGFAPG*TELLSRRTLDG
Trigger: CCCGTCCAGCGTTCTCCGCGACAGAAGCTCTGTGCACCCCGGCGCAAAGCCAGCCTCGCCGGCCCGGAGGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp AGGGCTGGCCGGGGCTGGGCGAAGGCGCCCTTGGGGTaGAGGGAGCCCACAGCGCGCTCATCTTCGTCTGAG +
Preference number: 6 (lower is better)
Translates to: RAGRGWAKAPLG*REPTARSSSSE
Trigger: CTCAGACGAAGATGAGCGCGCTGTGGGCTCCCTCCACCCCAAGGGCGCCTTCGCCCAGCCCCGGCCAGCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp CCCCTGCGCCTGTGGGAGACTCCACCTGCTGGTGCTTaGGAAGGGACGCAGCTGCCTCCTTGGCGCGCGCGG +
Preference number: 6 (lower is better)
Translates to: PLRLWETPPAGA*EGTQLPPWRAR
Trigger: CCGCGCGCGCCAAGGAGGCAGCTGCGTCCCTTCCCAAGCACCAGCAGGTGGAGTCTCCCACAGGCGCAGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp AGGGACGTGGGAGGCCCTGGGGGAGCTGCCTGGAGGTaGGGGGAGAGGTCGCTTCACAGGAGCCAGGCTCCC +
Preference number: 6 (lower is better)
Translates to: RDVGGPGGAAWR*GERSLHRSQAP
Trigger: GGGAGCCTGGCTCCTGTGAAGCGACCTCTCCCCCCACCTCCAGGCAGCTCCCCCAGGGCCTCCCACGTCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp CTGTGGTTGTTGGACGCCTGGTGGTCGTGCGGCGGGTaGTGGTCGTGCGGCGGGTGGTGGCAGTGGTGGGCC +
Preference number: 6 (lower is better)
Translates to: LWLLDAWWSCGG*WSCGGWWQWWA
Trigger: GGCCCACCACTGCCACCACCCGCCGCACGACCACCACCCGCCGCACGACCACCAGGCGTCCAACAACCACAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CAA 72 bp GCCCCTGCGCCTGTGGGAGACTCCACCTGCTGGTGCTaGGGAAGGGACGCAGCTGCCTCCTTGGCGCGCGCG +
Preference number: 6 (lower is better)
Translates to: APAPVGDSTCWC*GRDAAASLARA
Trigger: CGCGCGCGCCAAGGAGGCAGCTGCGTCCCTTCCCAAGCACCAGCAGGTGGAGTCTCCCACAGGCGCAGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 72 bp TTCCCTTCGGGGCAGCGCTGGCATCCGGGCCCTCACTaGAGTCCTGCCGGGAGCAACCACCGAGTGGCCGTG +
Preference number: 6 (lower is better)
Translates to: FPSGQRWHPGPH*SPAGSNHRVAV
Trigger: CACGGCCACTCGGTGGTTGCTCCCGGCAGGACTGCAGTGAGGGCCCGGATGCCAGCGCTGCCCCGAAGGGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 72 bp AGAGCCTGGGCTGGGAAGGTGACCGACCCGCGTCTCTaGTCTGGGGTCCCGGGTGGTGCTGGGACGTGGCGA +
Preference number: 6 (lower is better)
Translates to: RAWAGKVTDPRL*SGVPGGAGTWR
Trigger: TCGCCACGTCCCAGCACCACCCGGGACCCCAGAGCAGAGACGCGGGTCGGTCACCTTCCCAGCCCAGGCTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CAA 90 bp CTCCCTCCGCGAGGGGCAAGCGCGATGGCAGGCTCCCTCTCTTCCTaGGCGAGGCTCCCATCGGCGTCTTTGCCGCCCCTGGGAGTGGAG +
Preference number: 6 (lower is better)
Translates to: LPPRGASAMAGSLSS*ARLPSASLPPLGVE
Trigger: CTCCACTCCCAGGGGCGGCAAAGACGCCGATGGGAGCCTCGCCAAGGAAGAGAGGGAGCCTGCCATCGCGCTTGCCCCTCGCGGAGGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CAA 90 bp GCGTCCTCCTCCTCGTCGTCCTCGGCTGAGACCGACTGCTGGGACTaGGAGGACAGGGGCCGCTTGGAAGGAGGCTCCGACTTCCCCGGC +
Preference number: 6 (lower is better)
Translates to: ASSSSSSSAETDCWD*EDRGRLEGGSDFPG
Trigger: GCCGGGGAAGTCGGAGCCTCCTTCCAAGCGGCCCCTGTCCTCCAAGTCCCAGCAGTCGGTCTCAGCCGAGGACGACGAGGAGGAGGACGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 72 bp GGGGCAGCGCTGGCATCCGGGCCCTCACTGCAGTCCTaGCGGGAGCAACCACCGAGTGGCCGTGTCTACTTG +
Preference number: 6 (lower is better)
Translates to: GAALASGPSLQS*REQPPSGRVYL
Trigger: CAAGTAGACACGGCCACTCGGTGGTTGCTCCCGGCAGGACTGCAGTGAGGGCCCGGATGCCAGCGCTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 72 bp GCCCGGCCGGGTGTCATCCTTCTGGGAACACTGGGATaGTGCTGTGACCGTGCTGCGGGCGGACGAGCAGGG +
Preference number: 6 (lower is better)
Translates to: ARPGVILLGTLG*CCDRAAGGRAG
Trigger: CCCTGCTCGTCCGCCCGCAGCACGGTCACAGCAGCATCCCAGTGTTCCCAGAAGGATGACACCCGGCCGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp GCCAGGCTTATCTACGCCTTCCCTTCGGGGCAGCGCTaGCATCCGGGCCCTCACTGCAGTCCTGCCGGGAGC +
Preference number: 6 (lower is better)
Translates to: ARLIYAFPSGQR*HPGPHCSPAGS
Trigger: GCTCCCGGCAGGACTGCAGTGAGGGCCCGGATGCCAGCGCTGCCCCGAAGGGAAGGCGTAGATAAGCCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp GCTGAGGCACTGGAATCTTCCTCTGCGGCCCCTGAATaGGGGGTCCTCCGGGCCGGCGAGGCTGGCTTTGCG +
Preference number: 6 (lower is better)
Translates to: AEALESSSAAPE*GVLRAGEAGFA
Trigger: CGCAAAGCCAGCCTCGCCGGCCCGGAGGACCCCCCATTCAGGGGCCGCAGAGGAAGATTCCAGTGCCTCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp GAGGGGCAAGCGCGATGGCAGGCTCCCTCTCTTCCTTaGCGAGGCTCCCATCGGCGTCTTTGCCGCCCCTGG +
Preference number: 6 (lower is better)
Translates to: EGQARWQAPSLP*RGSHRRLCRPW
Trigger: CCAGGGGCGGCAAAGACGCCGATGGGAGCCTCGCCAAGGAAGAGAGGGAGCCTGCCATCGCGCTTGCCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp CAGGAGCCAGGCTCCCTCCGCGAGGGGCAAGCGCGATaGCAGGCTCCCTCTCTTCCTTGGCGAGGCTCCCAT +
Preference number: 6 (lower is better)
Translates to: QEPGSLREGQAR*QAPSLPWRGSH
Trigger: ATGGGAGCCTCGCCAAGGAAGAGAGGGAGCCTGCCATCGCGCTTGCCCCTCGCGGAGGGAGCCTGGCTCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp CAAGGACAGCATCGGGGTGGTGGAGAAGTGGCCAGGTaGGGCGCGCGTGGTGTACTGCGGCCAGGGGTGGGT +
Preference number: 6 (lower is better)
Translates to: QGQHRGGGEVAR*GARGVLRPGVG
Trigger: ACCCACCCCTGGCCGCAGTACACCACGCGCGCCCCACCTGGCCACTTCTCCACCACCCCGATGCTGTCCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CAA 72 bp CGAGGGGCAAGCGCGATGGCAGGCTCCCTCTCTTCCTaGGCGAGGCTCCCATCGGCGTCTTTGCCGCCCCTG +
Preference number: 6 (lower is better)
Translates to: RGASAMAGSLSS*ARLPSASLPPL
Trigger: CAGGGGCGGCAAAGACGCCGATGGGAGCCTCGCCAAGGAAGAGAGGGAGCCTGCCATCGCGCTTGCCCCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 72 bp CGGGAGGGCACAGTCGACTGTGGGGAGCTGGAGGGCTaGAGCCGAGGTCCCCGCCCAATGCTGAACCTGCTT +
Preference number: 6 (lower is better)
Translates to: REGTVDCGELEG*SRGPRPMLNLL
Trigger: AAGCAGGTTCAGCATTGGGCGGGGACCTCGGCTGCAGCCCTCCAGCTCCCCACAGTCGACTGTGCCCTCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 72 bp CGGCCGGGTGTCATCCTTCTGGGAACACTGGGATGCTaGTGTGACCGTGCTGCGGGCGGACGAGCAGGGGAC +
Preference number: 6 (lower is better)
Translates to: RPGVILLGTLGC*CDRAAGGRAGD
Trigger: GTCCCCTGCTCGTCCGCCCGCAGCACGGTCACAGCAGCATCCCAGTGTTCCCAGAAGGATGACACCCGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp CGGACGAGCAGGGGACGCGTGGCGGTCTGTGGACCCTaGCTGTGCTTTGGGAGAATGACCCTCCGTGTCCGC +
Preference number: 6 (lower is better)
Translates to: RTSRGRVAVCGP*LCFGRMTLRVR
Trigger: GCGGACACGGAGGGTCATTCTCCCAAAGCACAGCCAGGGTCCACAGACCGCCACGCGTCCCCTGCTCGTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp TGTGACCGTGCTGCGGGCGGACGAGCAGGGGACGCGTaGCGGTCTGTGGACCCTGGCTGTGCTTTGGGAGAA +
Preference number: 6 (lower is better)
Translates to: CDRAAGGRAGDA*RSVDPGCALGE
Trigger: TTCTCCCAAAGCACAGCCAGGGTCCACAGACCGCCACGCGTCCCCTGCTCGTCCGCCCGCAGCACGGTCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp CGTCCTGGTTCTGGAGGGCCGTGGGGAGCATCCCTCTaGAGCTCGCCGTGTAAGGGTCCGAGGAGGAGTGGG +
Preference number: 6 (lower is better)
Translates to: RPGSGGPWGASL*SSPCKGPRRSG
Trigger: CCCACTCCTCCTCGGACCCTTACACGGCGAGCTCCAGAGGGATGCTCCCCACGGCCCTCCAGAACCAGGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp GGCCAGAGGTGTGCCATGTCGCCCCTGCCCAAAGAGTaGGAGGCCGTCAGGACTCACCACGGGGGTCCCTTC +
Preference number: 6 (lower is better)
Translates to: GQRCAMSPLPKE*EAVRTHHGGPF
Trigger: GAAGGGACCCCCGTGGTGAGTCCTGACGGCCTCCCACTCTTTGGGCAGGGGCGACATGGCACACCTCTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp CATCGTCGTGCCGTTCCAAGGTCCCAGGGGGACAGGTaGGGATGGGAGTGGTGGGTGTGGGGGTGGTGGTGG +
Preference number: 6 (lower is better)
Translates to: HRRAVPRSQGDR*GWEWWVWGWWW
Trigger: CCACCACCACCCCCACACCCACCACTCCCATCCCCACCTGTCCCCCTGGGACCTTGGAACGGCACGACGATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 72 bp CCTGGGCCTCGACTTCTGTGCTGTCGTCGTCGTAGCTaGCCTGGGCATCCTCGTCCTGGTTCTGGAGGGCCG +
Preference number: 6 (lower is better)
Translates to: PGPRLLCCRRRS*PGHPRPGSGGP
Trigger: CGGCCCTCCAGAACCAGGACGAGGATGCCCAGGGCAGCTACGACGACGACAGCACAGAAGTCGAGGCCCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 72 bp GCGTCCTCCTCCTCGTCGTCCTCGGCTGAGACCGACTaGTGGGACTTGGAGGACAGGGGCCGCTTGGAAGGA +
Preference number: 6 (lower is better)
Translates to: ASSSSSSSAETD*WDLEDRGRLEG
Trigger: TCCTTCCAAGCGGCCCCTGTCCTCCAAGTCCCAGCAGTCGGTCTCAGCCGAGGACGACGAGGAGGAGGACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp GCCCTCACTGCAGTCCTGCCGGGAGCAACCACCGAGTaGCCGTGTCTACTTGGCGGCCTCAGGGTCCGTTTC +
Preference number: 6 (lower is better)
Translates to: ALTAVLPGATTE*PCLLGGLRVRF
Trigger: GAAACGGACCCTGAGGCCGCCAAGTAGACACGGCCACTCGGTGGTTGCTCCCGGCAGGACTGCAGTGAGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp GCTGCTGTTGTGGGGCCCGGCCGGGTGTCATCCTTCTaGGAACACTGGGATGCTGCTGTGACCGTGCTGCGG +
Preference number: 6 (lower is better)
Translates to: AAVVGPGRVSSF*EHWDAAVTVLR
Trigger: CCGCAGCACGGTCACAGCAGCATCCCAGTGTTCCCAGAAGGATGACACCCGGCCGGGCCCCACAACAGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp TGCCCTGGGCATCCTCGTCCTGGTTCTGGAGGGCCGTaGGGAGCATCCCTCTGGAGCTCGCCGTGTAAGGGT +
Preference number: 6 (lower is better)
Translates to: CPGHPRPGSGGP*GASLWSSPCKG
Trigger: ACCCTTACACGGCGAGCTCCAGAGGGATGCTCCCCACGGCCCTCCAGAACCAGGACGAGGATGCCCAGGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp CCTCGTCGTCCTCGGCTGAGACCGACTGCTGGGACTTaGAGGACAGGGGCCGCTTGGAAGGAGGCTCCGACT +
Preference number: 6 (lower is better)
Translates to: PRRPRLRPTAGT*RTGAAWKEAPT
Trigger: AGTCGGAGCCTCCTTCCAAGCGGCCCCTGTCCTCCAAGTCCCAGCAGTCGGTCTCAGCCGAGGACGACGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp TCCTCCTCCTCGTCGTCCTCGGCTGAGACCGACTGCTaGGACTTGGAGGACAGGGGCCGCTTGGAAGGAGGC +
Preference number: 6 (lower is better)
Translates to: SSSSSSSAETDC*DLEDRGRLEGG
Trigger: GCCTCCTTCCAAGCGGCCCCTGTCCTCCAAGTCCCAGCAGTCGGTCTCAGCCGAGGACGACGAGGAGGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CAA 72 bp TCCTCGTCGTCCTCGGCTGAGACCGACTGCTGGGACTaGGAGGACAGGGGCCGCTTGGAAGGAGGCTCCGAC +
Preference number: 6 (lower is better)
Translates to: SSSSSAETDCWD*EDRGRLEGGSD
Trigger: GTCGGAGCCTCCTTCCAAGCGGCCCCTGTCCTCCAAGTCCCAGCAGTCGGTCTCAGCCGAGGACGACGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS TCA 72 bp AGCTGGAGGGCTGCAGCCGAGGTCCCCGCCCAATGCTaGACCTGCTTGGAGACCTCCCGTTGGCAGCAAAGG +
Preference number: 6 (lower is better)
Translates to: SWRAAAEVPAQC*TCLETSRWQQR
Trigger: CCTTTGCTGCCAACGGGAGGTCTCCAAGCAGGTTCAGCATTGGGCGGGGACCTCGGCTGCAGCCCTCCAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 72 bp AGCAGGGGACGCGTGGCGGTCTGTGGACCCTGGCTGTaGTTTGGGAGAATGACCCTCCGTGTCCGCGTCTGT +
Preference number: 6 (lower is better)
Translates to: SRGRVAVCGPWL*FGRMTLRVRVC
Trigger: ACAGACGCGGACACGGAGGGTCATTCTCCCAAAGCACAGCCAGGGTCCACAGACCGCCACGCGTCCCCTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 72 bp CCCTCTCTTCCTTGGCGAGGCTCCCATCGGCGTCTTTaGCGCCCCTGGGAGTGGAGGAAGAGGGCCACTTTG +
Preference number: 6 (lower is better)
Translates to: PSLPWRGSHRRL*RPWEWRKRATL
Trigger: CAAAGTGGCCCTCTTCCTCCACTCCCAGGGGCGGCAAAGACGCCGATGGGAGCCTCGCCAAGGAAGAGAGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp CGCCCTTGGAAAGTGGAGAGCTCAGGTGTGGCTGGGTaGGCAGCAGCCGAGATGATCCCCCATGGGGTGGAG +
Preference number: 6 (lower is better)
Translates to: RPWKVESSGVAG*AAAEMIPHGVE
Trigger: CTCCACCCCATGGGGGATCATCTCGGCTGCTGCCCACCCAGCCACACCTGAGCTCTCCACTTTCCAAGGGCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp CATGCATCATCCTCTGGCGCAAGGACAGCATCGGGGTaGTGGAGAAGTGGCCAGGTGGGGCGCGCGTGGTGT +
Preference number: 6 (lower is better)
Translates to: HASSSGARTASG*WRSGQVGRAWC
Trigger: ACACCACGCGCGCCCCACCTGGCCACTTCTCCACCACCCCGATGCTGTCCTTGCGCCAGAGGATGATGCATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp GGTGGTTGTCCGCGTAGTGGTTCGGACTGTGGTTGTTaGACGCCTGGTGGTCGTGCGGCGGGTGGTGGTCGT +
Preference number: 6 (lower is better)
Translates to: GGCPRSGSDCGC*TPGGRAAGGGR
Trigger: ACGACCACCACCCGCCGCACGACCACCAGGCGTCCAACAACCACAGTCCGAACCACTACGCGGACAACCACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CAA 90 bp ATGGCAGGCTCCCTCTCTTCCTTGGCGAGGCTCCCATCGGCGTCTTaGCCGCCCCTGGGAGTGGAGGAAGAGGGCCACTTTGGCACAGAG +
Preference number: 6 (lower is better)
Translates to: MAGSLSSLARLPSAS*PPLGVEEEGHFGTE
Trigger: CTCTGTGCCAAAGTGGCCCTCTTCCTCCACTCCCAGGGGCGGCAAAGACGCCGATGGGAGCCTCGCCAAGGAAGAGAGGGAGCCTGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS TCA 72 bp GCGTGGTGCCTTCCACGCAACGGACAGCCTGTCATCTaGGGACCGGACACGCACACGCAAGGGCTTGTTGGG +
Preference number: 6 (lower is better)
Translates to: AWCLPRNGQPVI*GPDTHTQGLVG
Trigger: CCCAACAAGCCCTTGCGTGTGCGTGTCCGGTCCTCAGATGACAGGCTGTCCGTTGCGTGGAAGGCACCACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 72 bp TCTTGGGCATTGGCCAGAGGTGTGCCATGTCGCCCCTaGCCAAAGAGTGGGAGGCCGTCAGGACTCACCACG +
Preference number: 6 (lower is better)
Translates to: SWALARGVPCRP*PKSGRPSGLTT
Trigger: CGTGGTGAGTCCTGACGGCCTCCCACTCTTTGGGCAGGGGCGACATGGCACACCTCTGGCCAATGCCCAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp AGGACATGGTGGACCGTGATGGCGCATTGGAGTTGGTaGCTGGGGCGTCCTCACCATCCTTCCCGCCCTTGG +
Preference number: 6 (lower is better)
Translates to: RTWWTVMAHWSW*LGRPHHPSRPW
Trigger: CCAAGGGCGGGAAGGATGGTGAGGACGCCCCAGCCACCAACTCCAATGCGCCATCACGGTCCACCATGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp GCCTGCCTTCCGCCGTCTTCCCTATCGCCGTCACCGTaGCTTTCACCATCAGAAGCCTCCGCTCCCTCAGAG +
Preference number: 6 (lower is better)
Translates to: ACLPPSSLSPSP*LSPSEASAPSE
Trigger: CTCTGAGGGAGCGGAGGCTTCTGATGGTGAAAGCCACGGTGACGGCGATAGGGAAGACGGCGGAAGGCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp CGAGGCTCCCATCGGCGTCTTTGCCGCCCCTGGGAGTaGAGGAAGAGGGCCACTTTGGCACAGAGGAAGACA +
Preference number: 6 (lower is better)
Translates to: RGSHRRLCRPWE*RKRATLAQRKT
Trigger: TGTCTTCCTCTGTGCCAAAGTGGCCCTCTTCCTCCACTCCCAGGGGCGGCAAAGACGCCGATGGGAGCCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CAA 72 bp TCCTGCCGGGAGCAACCACCGAGTGGCCGTGTCTACTaGGCGGCCTCAGGGTCCGTTTCTGGTCTTGGGTGT +
Preference number: 6 (lower is better)
Translates to: SCREQPPSGRVY*AASGSVSGLGC
Trigger: ACACCCAAGACCAGAAACGGACCCTGAGGCCGCCAAGTAGACACGGCCACTCGGTGGTTGCTCCCGGCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CAA 72 bp TCCCTCTCTTCCTTGGCGAGGCTCCCATCGGCGTCTTaGCCGCCCCTGGGAGTGGAGGAAGAGGGCCACTTT +
Preference number: 6 (lower is better)
Translates to: SLSSLARLPSAS*PPLGVEEEGHF
Trigger: AAAGTGGCCCTCTTCCTCCACTCCCAGGGGCGGCAAAGACGCCGATGGGAGCCTCGCCAAGGAAGAGAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CAA 90 bp TCACTGCAGTCCTGCCGGGAGCAACCACCGAGTGGCCGTGTCTACTaGGCGGCCTCAGGGTCCGTTTCTGGTCTTGGGTGTCTGAGGGTG +
Preference number: 6 (lower is better)
Translates to: SLQSCREQPPSGRVY*AASGSVSGLGCLRV
Trigger: CACCCTCAGACACCCAAGACCAGAAACGGACCCTGAGGCCGCCAAGTAGACACGGCCACTCGGTGGTTGCTCCCGGCAGGACTGCAGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CAA 90 bp CAGCCCCGGGAGATGGGCTGCCTGGAGGAGGAAGGCACGTGGTCATaGACAACGGTGGCAGGAAGCGGCTTCTCATCCTCCTCGTCTCCA +
Preference number: 6 (lower is better)
Translates to: QPREMGCLEEEGTWS*TTVAGSGFSSSSSP
Trigger: TGGAGACGAGGAGGATGAGAAGCCGCTTCCTGCCACCGTTGTCAATGACCACGTGCCTTCCTCCTCCAGGCAGCCCATCTCCCGGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp AGCCCAGGAGAAAACCCCGTGATCTGCGTGGACTCTTaGCTCCAGACAGGCGTGGTGCCTTCCACGCAACGG +
Preference number: 6 (lower is better)
Translates to: SPGENPVICVDS*LQTGVVPSTQR
Trigger: CCGTTGCGTGGAAGGCACCACGCCTGTCTGGAGCCAAGAGTCCACGCAGATCACGGGGTTTTCTCCTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp TGTCTACTTGGCGGCCTCAGGGTCCGTTTCTGGTCTTaGGTGTCTGAGGGTGACATGGGCGAGTCCTCCCGG +
Preference number: 6 (lower is better)
Translates to: CLLGGLRVRFWS*VSEGDMGESSR
Trigger: CCGGGAGGACTCGCCCATGTCACCCTCAGACACCCAAGACCAGAAACGGACCCTGAGGCCGCCAAGTAGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp TGGGGTTCTCTGGGATGGGTTCCTTCCGATGCAGGCTaGCCCCTCTCTGCGGGCTTCTCCTTAAGTCCTCCC +
Preference number: 6 (lower is better)
Translates to: WGSLGWVPSDAG*PLSAGFSLSPP
Trigger: GGGAGGACTTAAGGAGAAGCCCGCAGAGAGGGGCCAGCCTGCATCGGAAGGAACCCATCCCAGAGAACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp TCCACGGCCACCACGGTGATGTTGCGGGGAGCATGCTaGGGAGGCAGGTCACTCTTCTTCAGGTCATTGGGG +
Preference number: 6 (lower is better)
Translates to: STATTVMLRGAC*GGRSLFFRSLG
Trigger: CCCCAATGACCTGAAGAAGAGTGACCTGCCTCCCCAGCATGCTCCCCGCAACATCACCGTGGTGGCCGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CAA 90 bp GAAGAGACGGAGGAGGACATGGTGGACCGTGATGGCGCATTGGAGTaGGTGGCTGGGGCGTCCTCACCATCCTTCCCGCCCTTGGAAAGT +
Preference number: 6 (lower is better)
Translates to: EETEEDMVDRDGALE*VAGASSPSFPPLES
Trigger: ACTTTCCAAGGGCGGGAAGGATGGTGAGGACGCCCCAGCCACCAACTCCAATGCGCCATCACGGTCCACCATGTCCTCCTCCGTCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS TCA 72 bp GGGGTGGAGGGAGCCCACAGCGCGCTCATCTTCGTCTaGGTCCACCAAGTCGTTGTCATTCAAGCTGGCAGG +
Preference number: 6 (lower is better)
Translates to: GVEGAHSALIFV*VHQVVVIQAGR
Trigger: CCTGCCAGCTTGAATGACAACGACTTGGTGGACTCAGACGAAGATGAGCGCGCTGTGGGCTCCCTCCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 72 bp GCAGGCTGTCGGGAGAGAGGGTTACGGAATCTGGCATaGATCATCCTCTGGCGCAAGGACAGCATCGGGGTG +
Preference number: 6 (lower is better)
Translates to: AGCRERGLRNLA*IILWRKDSIGV
Trigger: CACCCCGATGCTGTCCTTGCGCCAGAGGATGATGCATGCCAGATTCCGTAACCCTCTCTCCCGACAGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp CTGCAGCCGAGGTCCCCGCCCAATGCTGAACCTGCTTaGAGACCTCCCGTTGGCAGCAAAGGGTTTGTGTCT +
Preference number: 6 (lower is better)
Translates to: LQPRSPPNAEPA*RPPVGSKGFVS
Trigger: AGACACAAACCCTTTGCTGCCAACGGGAGGTCTCCAAGCAGGTTCAGCATTGGGCGGGGACCTCGGCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CAA 90 bp CCAATGCTGAACCTGCTTGGAGACCTCCCGTTGGCAGCAAAGGGTTaGTGTCTGAGCAAATGGAAGTGTCCAGAGGCAGGCCGGGCCCGC +
Preference number: 6 (lower is better)
Translates to: PMLNLLGDLPLAAKG*CLSKWKCPEAGRAR
Trigger: GCGGGCCCGGCCTGCCTCTGGACACTTCCATTTGCTCAGACACAAACCCTTTGCTGCCAACGGGAGGTCTCCAAGCAGGTTCAGCATTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS TCA 72 bp TTGGAGACCTCCCGTTGGCAGCAAAGGGTTTGTGTCTaGGCAAATGGAAGTGTCCAGAGGCAGGCCGGGCCC +
Preference number: 6 (lower is better)
Translates to: LETSRWQQRVCV*ANGSVQRQAGP
Trigger: GGGCCCGGCCTGCCTCTGGACACTTCCATTTGCTCAGACACAAACCCTTTGCTGCCAACGGGAGGTCTCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS TCA 72 bp GGCTGGGCAGGGCAAGCTTGCAGCATGACGGTCCTGTaGTTACCACTTTCCAGGGATGGAGACCCCACACTC +
Preference number: 6 (lower is better)
Translates to: GWAGQACSMTVL*LPLSRDGDPTL
Trigger: GAGTGTGGGGTCTCCATCCCTGGAAAGTGGTAATCACAGGACCGTCATGCTGCAAGCTTGCCCTGCCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 72 bp GTGCTTTGGGAGAATGACCCTCCGTGTCCGCGTCTGTaGTCTGTTGAACATCCTGAGCCTTGGAGGCCAGGG +
Preference number: 6 (lower is better)
Translates to: VLWENDPPCPRL*SVEHPEPWRPG
Trigger: CCCTGGCCTCCAAGGCTCAGGATGTTCAACAGAGCACAGACGCGGACACGGAGGGTCATTCTCCCAAAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp CCCTGTAGACTGGTTGGCTCCGGCCCTGAGAGTTCATaGACTGCAGGGAGACCACATACACGGATTCCGAGG +
Preference number: 6 (lower is better)
Translates to: PCRLVGSGPESS*TAGRPHTRIPR
Trigger: CCTCGGAATCCGTGTATGTGGTCTCCCTGCAGTCCATGAACTCTCAGGGCCGGAGCCAACCAGTCTACAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297267.14
ENST00000329629.8
ENST00000480856.1
CDS CCA 72 bp GTCTGGCAGGCTGTCGGGAGAGAGGGTTACGGAATCTaGCATGCATCATCCTCTGGCGCAAGGACAGCATCG +
Preference number: 6 (lower is better)
Translates to: VWQAVGREGYGI*HASSSGARTAS
Trigger: CGATGCTGTCCTTGCGCCAGAGGATGATGCATGCCAGATTCCGTAACCCTCTCTCCCGACAGCCTGCCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CAA 90 bp CTGTGCTTTGGGAGAATGACCCTCCGTGTCCGCGTCTGTGCTCTGTaGAACATCCTGAGCCTTGGAGGCCAGGGAGGAGTACTTGCCCTG +
Preference number: 6 (lower is better)
Translates to: LCFGRMTLRVRVCAL*NILSLGGQGGVLAL
Trigger: CAGGGCAAGTACTCCTCCCTGGCCTCCAAGGCTCAGGATGTTCAACAGAGCACAGACGCGGACACGGAGGGTCATTCTCCCAAAGCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CAA 90 bp AGCCGAGGTCCCCGCCCAATGCTGAACCTGCTTGGAGACCTCCCGTaGGCAGCAAAGGGTTTGTGTCTGAGCAAATGGAAGTGTCCAGAG +
Preference number: 6 (lower is better)
Translates to: SRGPRPMLNLLGDLP*AAKGLCLSKWKCPE
Trigger: CTCTGGACACTTCCATTTGCTCAGACACAAACCCTTTGCTGCCAACGGGAGGTCTCCAAGCAGGTTCAGCATTGGGCGGGGACCTCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 72 bp GGCCAGGGAGGAGTACTTGCCCTGAGGATGTGTATCTaGCCCTGTGGATTTGGGGTTCTCTGGGATGGGTTC +
Preference number: 6 (lower is better)
Translates to: GQGGVLALRMCI*PCGFGVLWDGF
Trigger: GAACCCATCCCAGAGAACCCCAAATCCACAGGGGCAGATACACATCCTCAGGGCAAGTACTCCTCCCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp CTTCGTCTGAGTCCACCAAGTCGTTGTCATTCAAGCTaGCAGGCAGGGAAGGACGATGAGAGGTGCCCTGGG +
Preference number: 6 (lower is better)
Translates to: LRLSPPSRCHSS*QAGKDDERCPG
Trigger: CCCAGGGCACCTCTCATCGTCCTTCCCTGCCTGCCAGCTTGAATGACAACGACTTGGTGGACTCAGACGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp GAGAGAGGGTTACGGAATCTGGCATGCATCATCCTCTaGCGCAAGGACAGCATCGGGGTGGTGGAGAAGTGG +
Preference number: 6 (lower is better)
Translates to: ERGLRNLACIIL*RKDSIGVVEKW
Trigger: CCACTTCTCCACCACCCCGATGCTGTCCTTGCGCCAGAGGATGATGCATGCCAGATTCCGTAACCCTCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp GCAGTCCGTGTAGCTGGGATCATGTTTGAAAGCGAATaGGATCCAGATAGGCTCACCGCCTGGGGGCCTCAC +
Preference number: 6 (lower is better)
Translates to: AVRVAGIMFESE*DPDRLTAWGPH
Trigger: GTGAGGCCCCCAGGCGGTGAGCCTATCTGGATCCCATTCGCTTTCAAACATGATCCCAGCTACACGGACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CAA 90 bp ACCAGCGGCTTTCCTCCAAGACTCAAAATTGGCTTATCTTGGGCATaGGCCAGAGGTGTGCCATGTCGCCCCTGCCCAAAGAGTGGGAGG +
Preference number: 6 (lower is better)
Translates to: TSGFPPRLKIGLSWA*ARGVPCRPCPKSGR
Trigger: CCTCCCACTCTTTGGGCAGGGGCGACATGGCACACCTCTGGCCAATGCCCAAGATAAGCCAATTTTGAGTCTTGGAGGAAAGCCGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CAA 90 bp CAAGCCCACCAGCGGCTTTCCTCCAAGACTCAAAATTGGCTTATCTaGGGCATTGGCCAGAGGTGTGCCATGTCGCCCCTGCCCAAAGAG +
Preference number: 6 (lower is better)
Translates to: QAHQRLSSKTQNWLI*GIGQRCAMSPLPKE
Trigger: CTCTTTGGGCAGGGGCGACATGGCACACCTCTGGCCAATGCCCAAGATAAGCCAATTTTGAGTCTTGGAGGAAAGCCGCTGGTGGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS TCA 72 bp GAGGTCCCAGGCCTCTCCTGTTTGTGGCCCGGATTTTaGAAAGATAGCGTTCCCCAGGCTGCAGACCATCCA +
Preference number: 6 (lower is better)
Translates to: EVPGLSCLWPGF*KDSVPQAADHP
Trigger: TGGATGGTCTGCAGCCTGGGGAACGCTATCTTTTCAAAATCCGGGCCACAAACAGGAGAGGCCTGGGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297267.14
CDS TCA 72 bp TTAGTTGGTGGGGCTGGGCAGGGCAAGCTTGCAGCATaGCGGTCCTGTGATTACCACTTTCCAGGGATGGAG +
Preference number: 6 (lower is better)
Translates to: LVGGAGQGKLAA*RSCDYHFPGME
Trigger: CTCCATCCCTGGAAAGTGGTAATCACAGGACCGTCATGCTGCAAGCTTGCCCTGCCCAGCCCCACCAACTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 72 bp GAACATCCTGAGCCTTGGAGGCCAGGGAGGAGTACTTaGCCTGAGGATGTGTATCTGCCCCTGTGGATTTGG +
Preference number: 6 (lower is better)
Translates to: EHPEPWRPGRST*PEDVYLPLWIW
Trigger: CCAAATCCACAGGGGCAGATACACATCCTCAGGGCAAGTACTCCTCCCTGGCCTCCAAGGCTCAGGATGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 72 bp TCAAAATTGGCTTATCTTGGGCATTGGCCAGAGGTGTaGCATGTCGCCCCTGCCCAAAGAGTGGGAGGCCGT +
Preference number: 6 (lower is better)
Translates to: SKLAYLGHWPEV*HVAPAQRVGGR
Trigger: ACGGCCTCCCACTCTTTGGGCAGGGGCGACATGGCACACCTCTGGCCAATGCCCAAGATAAGCCAATTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 72 bp AGCACTCTGGGATCCCATTGGAGCTCATTATCAGGTTaGCATCATCGTCGTGCCGTTCCAAGGTCCCAGGGG +
Preference number: 6 (lower is better)
Translates to: STLGSHWSSLSG*HHRRAVPRSQG
Trigger: CCCCTGGGACCTTGGAACGGCACGACGATGATGGCAACCTGATAATGAGCTCCAATGGGATCCCAGAGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp ACTTGCCCTGAGGATGTGTATCTGCCCCTGTGGATTTaGGGTTCTCTGGGATGGGTTCCTTCCGATGCAGGC +
Preference number: 6 (lower is better)
Translates to: TCPEDVYLPLWI*GSLGWVPSDAG
Trigger: GCCTGCATCGGAAGGAACCCATCCCAGAGAACCCCAAATCCACAGGGGCAGATACACATCCTCAGGGCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CAA 72 bp CCCCGCCCAATGCTGAACCTGCTTGGAGACCTCCCGTaGGCAGCAAAGGGTTTGTGTCTGAGCAAATGGAAG +
Preference number: 6 (lower is better)
Translates to: PRPMLNLLGDLP*AAKGLCLSKWK
Trigger: CTTCCATTTGCTCAGACACAAACCCTTTGCTGCCAACGGGAGGTCTCCAAGCAGGTTCAGCATTGGGCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS TCA 72 bp CTGGTTGTTGGCATAGCGACAATGAAGGCTTTGGAGTaGGGTCCCAGGCCTCTCCTGTTTGTGGCCCGGATT +
Preference number: 6 (lower is better)
Translates to: LVVGIATMKALE*GPRPLLFVARI
Trigger: AATCCGGGCCACAAACAGGAGAGGCCTGGGACCTCACTCCAAAGCCTTCATTGTCGCTATGCCAACAACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297267.14
CDS TCA 72 bp TCCTGGGGTGGCTTTGTCCCAGTCCACAATGACAAATaGGTGGCAACCTTCCACGGCCACCACGGTGATGTT +
Preference number: 6 (lower is better)
Translates to: SWGGFVPVHNDK*VATFHGHHGDV
Trigger: AACATCACCGTGGTGGCCGTGGAAGGTTGCCACTCATTTGTCATTGTGGACTGGGACAAAGCCACCCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS TCA 72 bp GACGGGGCAAGCTTCCAGGAGCCCTCCTCCTCACGGTaGTCTCTTACATCATTCACGGTAGCAAGTCTAGTG +
Preference number: 6 (lower is better)
Translates to: DGASFQEPSSSR*SLTSFTVASLV
Trigger: CACTAGACTTGCTACCGTGAATGATGTAAGAGATCACCGTGAGGAGGAGGGCTCCTGGAAGCTTGCCCCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480856.1
CDS CCA 72 bp GTGGCAGGAAGCGGCTTCTCATCCTCCTCGTCTCCATaGATACCTGAGCTAAGCTTAGGGTGGGAATCAGAG +
Preference number: 6 (lower is better)
Translates to: VAGSGFSSSSSP*IPELSLGWESE
Trigger: CTCTGATTCCCACCCTAAGCTTAGCTCAGGTATCCATGGAGACGAGGAGGATGAGAAGCCGCTTCCTGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp TTCTTCTTCAGGAAAGGAACTGATGGCGCCTTCCTCTaGGATCACCCTCGGTGTGGTAGCAGTGGTCGAAGG +
Preference number: 6 (lower is better)
Translates to: FFFRKGTDGAFL*DHPRCGSSGRR
Trigger: CCTTCGACCACTGCTACCACACCGAGGGTGATCCCAGAGGAAGGCGCCATCAGTTCCTTTCCTGAAGAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CAA 72 bp AACCTGCTTGGAGACCTCCCGTTGGCAGCAAAGGGTTaGTGTCTGAGCAAATGGAAGTGTCCAGAGGCAGGC +
Preference number: 6 (lower is better)
Translates to: NLLGDLPLAAKG*CLSKWKCPEAG
Trigger: GCCTGCCTCTGGACACTTCCATTTGCTCAGACACAAACCCTTTGCTGCCAACGGGAGGTCTCCAAGCAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CAA 72 bp CAGCGGCTTTCCTCCAAGACTCAAAATTGGCTTATCTaGGGCATTGGCCAGAGGTGTGCCATGTCGCCCCTG +
Preference number: 6 (lower is better)
Translates to: QRLSSKTQNWLI*GIGQRCAMSPL
Trigger: CAGGGGCGACATGGCACACCTCTGGCCAATGCCCAAGATAAGCCAATTTTGAGTCTTGGAGGAAAGCCGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CAA 90 bp GCTCTGGGAGAAGGTGAGGAAGGCTCAGGTTTTTCGGGTTTCCCATaGTCCTCCGTGTTCTGCTCAACATCCGCCTTACTGGTTGTTGGC +
Preference number: 6 (lower is better)
Translates to: ALGEGEEGSGFSGFP*SSVFCSTSALLVVG
Trigger: GCCAACAACCAGTAAGGCGGATGTTGAGCAGAACACGGAGGACAATGGGAAACCCGAAAAACCTGAGCCTTCCTCACCTTCTCCCAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297267.14
CDS TCA 72 bp TCCAGAACAGGATCCACCCAGGACACAAGCACAGACTaGGATGACATAACCCGGACGCTGATGTCGTCAGGT +
Preference number: 6 (lower is better)
Translates to: SRTGSTQDTSTD*DDITRTLMSSG
Trigger: ACCTGACGACATCAGCGTCCGGGTTATGTCATCTCAGTCTGTGCTTGTGTCCTGGGTGGATCCTGTTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297267.14
ENST00000329629.8
ENST00000480856.1
CDS TCA 72 bp AAGCGGCTTCTCATCCTCCTCGTCTCCATGGATACCTaGGCTAAGCTTAGGGTGGGAATCAGAGTGAGAGGG +
Preference number: 6 (lower is better)
Translates to: KRLLILLVSMDT*AKLRVGIRVRG
Trigger: CCCTCTCACTCTGATTCCCACCCTAAGCTTAGCTCAGGTATCCATGGAGACGAGGAGGATGAGAAGCCGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS TCA 72 bp AGTAGTAGGGGGTTCCGAAGCCGATGTTCCCAAACCTaGCAGGCTCCTGACGATACTGGCGATAGTAGCCTT +
Preference number: 6 (lower is better)
Translates to: SSRGFRSRCSQT*QAPDDTGDSSL
Trigger: AAGGCTACTATCGCCAGTATCGTCAGGAGCCTGTCAGGTTTGGGAACATCGGCTTCGGAACCCCCTACTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 72 bp ACTTTCAGGCCCATTTTAGTGGACAGCAGTTTCACATaGCTTGGCTTCAGTGGGTGGTCAACTGAGGCCGCC +
Preference number: 6 (lower is better)
Translates to: TFRPILVDSSFT*LGFSGWSTEAA
Trigger: GGCGGCCTCAGTTGACCACCCACTGAAGCCAAGGCATGTGAAACTGCTGTCCACTAAAATGGGCCTGAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297267.14
CDS CCA 72 bp AGGAGTACTTGCCCTGAGGATGTGTATCTGCCCCTGTaGATTTGGGGTTCTCTGGGATGGGTTCCTTCCGAT +
Preference number: 6 (lower is better)
Translates to: RSTCPEDVYLPL*IWGSLGWVPSD
Trigger: ATCGGAAGGAACCCATCCCAGAGAACCCCAAATCCACAGGGGCAGATACACATCCTCAGGGCAAGTACTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp CAAGCCCACCAGCGGCTTTCCTCCAAGACTCAAAATTaGCTTATCTTGGGCATTGGCCAGAGGTGTGCCATG +
Preference number: 6 (lower is better)
Translates to: QAHQRLSSKTQN*LILGIGQRCAM
Trigger: CATGGCACACCTCTGGCCAATGCCCAAGATAAGCCAATTTTGAGTCTTGGAGGAAAGCCGCTGGTGGGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp CAGCATGACGGTCCTGTGATTACCACTTTCCAGGGATaGAGACCCCACACTCGTACCAGCCCACATAGTAGT +
Preference number: 6 (lower is better)
Translates to: QHDGPVITTFQG*RPHTRTSPHSS
Trigger: ACTACTATGTGGGCTGGTACGAGTGTGGGGTCTCCATCCCTGGAAAGTGGTAATCACAGGACCGTCATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CAA 72 bp CCAAGCCCACCAGCGGCTTTCCTCCAAGACTCAAAATaGGCTTATCTTGGGCATTGGCCAGAGGTGTGCCAT +
Preference number: 6 (lower is better)
Translates to: PSPPAAFLQDSK*AYLGHWPEVCH
Trigger: ATGGCACACCTCTGGCCAATGCCCAAGATAAGCCAATTTTGAGTCTTGGAGGAAAGCCGCTGGTGGGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CAA 72 bp TCCCACGAACTTTCGATACCACGTGCGCTTCACATATaGCCGTCCATGGCAGTCCGTGTAGCTGGGATCATG +
Preference number: 6 (lower is better)
Translates to: SHELSIPRALHI*PSMAVRVAGIM
Trigger: CATGATCCCAGCTACACGGACTGCCATGGACGGCAATATGTGAAGCGCACGTGGTATCGAAAGTTCGTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CAA 90 bp TCTGGTAGCGCATCCCAAGATGCAGCGACAACTGTAGGTTTGCCATaGACTGGCCAGACGTTCAAGTTTTCAGGAGCTGTGGTAGGGGCA +
Preference number: 6 (lower is better)
Translates to: SGSASQDAATTVGLP*TGQTFKFSGAVVGA
Trigger: TGCCCCTACCACAGCTCCTGAAAACTTGAACGTCTGGCCAGTCAATGGCAAACCTACAGTTGTCGCTGCATCTTGGGATGCGCTACCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CAA 90 bp GCTCTGGGAGAAGGTGAGGAAGGCTCAGGTTTTTCGGGTTTCCCATaGTCCTCCGTGTTCTGCTCAACATCCGCCTTACTGGCTTTCACT +
Preference number: 6 (lower is better)
Translates to: ALGEGEEGSGFSGFP*SSVFCSTSALLAFT
Trigger: AGTGAAAGCCAGTAAGGCGGATGTTGAGCAGAACACGGAGGACAATGGGAAACCCGAAAAACCTGAGCCTTCCTCACCTTCTCCCAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329629.8
CDS TCA 72 bp AACAGGATCCACCCAGGACACAAGCACAGACTGAGATaGCATAACCCGGACGCTGATGTCGTCAGGTACATC +
Preference number: 6 (lower is better)
Translates to: NRIHPGHKHRLR*HNPDADVVRYI
Trigger: GATGTACCTGACGACATCAGCGTCCGGGTTATGTCATCTCAGTCTGTGCTTGTGTCCTGGGTGGATCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297267.14
ENST00000329629.8
ENST00000480856.1
CDS TCA 72 bp GGGGAGGCAGGTCACTCTTCTTCAGGTCATTGGGGATaGTTTCATCCAGGCTGTCCACTTGGAAGTGATCCA +
Preference number: 6 (lower is better)
Translates to: GEAGHSSSGHWG*FHPGCPLGSDP
Trigger: TGGATCACTTCCAAGTGGACAGCCTGGATGAAATCATCCCCAATGACCTGAAGAAGAGTGACCTGCCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 72 bp TCTGTAAACAGGACGGCTCACTCCACTGTGGTTTTCTaGAGTAAGCAGCACAAAGTACACTACCCCCGGCTC +
Preference number: 6 (lower is better)
Translates to: SVNRTAHSTVVF*SKQHKVHYPRL
Trigger: GAGCCGGGGGTAGTGTACTTTGTGCTGCTTACTGCAGAAAACCACAGTGGAGTGAGCCGTCCTGTTTACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp TTGGTCTGCCATTATAACCTTGTCTGTAAGAGGGTCTaGCAGGCTGTCGGGAGAGAGGGTTACGGAATCTGG +
Preference number: 6 (lower is better)
Translates to: LVCHYNLVCKRV*QAVGREGYGIW
Trigger: CCAGATTCCGTAACCCTCTCTCCCGACAGCCTGCCAGACCCTCTTACAGACAAGGTTATAATGGCAGACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp TTCCTCCAAGACTCAAAATTGGCTTATCTTGGGCATTaGCCAGAGGTGTGCCATGTCGCCCCTGCCCAAAGA +
Preference number: 6 (lower is better)
Translates to: FLQDSKLAYLGH*PEVCHVAPAQR
Trigger: TCTTTGGGCAGGGGCGACATGGCACACCTCTGGCCAATGCCCAAGATAAGCCAATTTTGAGTCTTGGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CAA 72 bp CTGTCATCTGAGGACCGGACACGCACACGCAAGGGCTaGTTGGGCACTTCCTTTTCTGTGACGGTTTCATTA +
Preference number: 6 (lower is better)
Translates to: LSSEDRTRTRKG*LGTSFSVTVSL
Trigger: TAATGAAACCGTCACAGAAAAGGAAGTGCCCAACAAGCCCTTGCGTGTGCGTGTCCGGTCCTCAGATGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CAA 72 bp GAAGGTGAGGAAGGCTCAGGTTTTTCGGGTTTCCCATaGTCCTCCGTGTTCTGCTCAACATCCGCCTTACTG +
Preference number: 6 (lower is better)
Translates to: EGEEGSGFSGFP*SSVFCSTSALL
Trigger: CAGTAAGGCGGATGTTGAGCAGAACACGGAGGACAATGGGAAACCCGAAAAACCTGAGCCTTCCTCACCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CAA 72 bp TTTCCTCCAAGACTCAAAATTGGCTTATCTTGGGCATaGGCCAGAGGTGTGCCATGTCGCCCCTGCCCAAAG +
Preference number: 6 (lower is better)
Translates to: FPPRLKIGLSWA*ARGVPCRPCPK
Trigger: CTTTGGGCAGGGGCGACATGGCACACCTCTGGCCAATGCCCAAGATAAGCCAATTTTGAGTCTTGGAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CAA 90 bp TCAGTCTCTGGTAGCGCATCCCAAGATGCAGCGACAACTGTAGGTTaGCCATTGACTGGCCAGACGTTCAAGTTTTCAGGAGCTGTGGTA +
Preference number: 6 (lower is better)
Translates to: SVSGSASQDAATTVG*PLTGQTFKFSGAVV
Trigger: TACCACAGCTCCTGAAAACTTGAACGTCTGGCCAGTCAATGGCAAACCTACAGTTGTCGCTGCATCTTGGGATGCGCTACCAGAGACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp GTAATGCTCCACAGGTCTACTGGTAGCATCTTTGGGTaGGTCCCACGTGACTTTCAGGCCCATTTTAGTGGA +
Preference number: 6 (lower is better)
Translates to: VMLHRSTGSIFG*VPRDFQAHFSG
Trigger: TCCACTAAAATGGGCCTGAAAGTCACGTGGGACCCACCCAAAGATGCTACCAGTAGACCTGTGGAGCATTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp CCAAGATGCAGCGACAACTGTAGGTTTGCCATTGACTaGCCAGACGTTCAAGTTTTCAGGAGCTGTGGTAGG +
Preference number: 6 (lower is better)
Translates to: PRCSDNCRFAID*PDVQVFRSCGR
Trigger: CCTACCACAGCTCCTGAAAACTTGAACGTCTGGCCAGTCAATGGCAAACCTACAGTTGTCGCTGCATCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297267.14
ENST00000329629.8
ENST00000480856.1
CDS CCA 72 bp ACTCATCTTCTTCAGCGTAGCACTCTGGGATCCCATTaGAGCTCATTATCAGGTTGCCATCATCGTCGTGCC +
Preference number: 6 (lower is better)
Translates to: THLLQRSTLGSH*SSLSGCHHRRA
Trigger: GGCACGACGATGATGGCAACCTGATAATGAGCTCCAATGGGATCCCAGAGTGCTACGCTGAAGAAGATGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp GGCCCTGTTCTTCCATCAAGGTGTGAATCCACAAATTaGCAATGGTCTTCACCTCTTCCCCAGCTGTCTCCA +
Preference number: 6 (lower is better)
Translates to: GPVLPSRCESTN*QWSSPLPQLSP
Trigger: TGGAGACAGCTGGGGAAGAGGTGAAGACCATTGCCAATTTGTGGATTCACACCTTGATGGAAGAACAGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CAA 72 bp GCATCCCAAGATGCAGCGACAACTGTAGGTTTGCCATaGACTGGCCAGACGTTCAAGTTTTCAGGAGCTGTG +
Preference number: 6 (lower is better)
Translates to: ASQDAATTVGLP*TGQTFKFSGAV
Trigger: CACAGCTCCTGAAAACTTGAACGTCTGGCCAGTCAATGGCAAACCTACAGTTGTCGCTGCATCTTGGGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297267.14
ENST00000329629.8
ENST00000480856.1
CDS CAA 72 bp GGTAGCGCATCCCAAGATGCAGCGACAACTGTAGGTTaGCCATTGACTGGCCAGACGTTCAAGTTTTCAGGA +
Preference number: 6 (lower is better)
Translates to: GSASQDAATTVG*PLTGQTFKFSG
Trigger: TCCTGAAAACTTGAACGTCTGGCCAGTCAATGGCAAACCTACAGTTGTCGCTGCATCTTGGGATGCGCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CAA 90 bp AAGAACAACTCCCACGAACTTTCGATACCACGTGCGCTTCACATATaGCCGTCCATGGCAGTCCGTGTAGCTGGGATCATGTTTGAAAGC +
Preference number: 6 (lower is better)
Translates to: KNNSHELSIPRALHI*PSMAVRVAGIMFES
Trigger: GCTTTCAAACATGATCCCAGCTACACGGACTGCCATGGACGGCAATATGTGAAGCGCACGTGGTATCGAAAGTTCGTGGGAGTTGTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 72 bp TGGTATAAACGGCTTGAAAATCCCATGCAGGATAAGTaGGTAGACAGGCTTCCCATGACACGGCAGGTCCAT +
Preference number: 6 (lower is better)
Translates to: WYKRLENPMQDK*VDRLPMTRQVH
Trigger: ATGGACCTGCCGTGTCATGGGAAGCCTGTCTACGCACTTATCCTGCATGGGATTTTCAAGCCGTTTATACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480856.1
CDS CCA 72 bp TACACGGATTCCGAGGCAAGGGTTCTGTGGCCTCTCTaGTATAAACGGCTTGAAAATCCCATGCAGGATAAG +
Preference number: 6 (lower is better)
Translates to: YTDSEARVLWPL*YKRLENPMQDK
Trigger: CTTATCCTGCATGGGATTTTCAAGCCGTTTATACCAGAGAGGCCACAGAACCCTTGCCTCGGAATCCGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480856.1
CDS CAA 72 bp TCATCTGAGGACCGGACACGCACACGCAAGGGCTTGTaGGGCACTTCCTTTTCTGTGACGGTTTCATTAAAT +
Preference number: 6 (lower is better)
Translates to: SSEDRTRTRKGL*GTSFSVTVSLN
Trigger: ATTTAATGAAACCGTCACAGAAAAGGAAGTGCCCAACAAGCCCTTGCGTGTGCGTGTCCGGTCCTCAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp TCAGGAGCTGTGGTAGGGGCAGATTCTGGTGTTCTTTaGAAGACTGACGTACTCCATTTGCCATCTCTTTCA +
Preference number: 6 (lower is better)
Translates to: SGAVVGADSGVL*KTDVLHLPSLS
Trigger: TGAAAGAGATGGCAAATGGAGTACGTCAGTCTTCCAAAGAACACCAGAATCTGCCCCTACCACAGCTCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297267.14
ENST00000329629.8
ENST00000480856.1
CDS TCA 72 bp TACATAGGACTGAGGCCCTGTTCTTCCATCAAGGTGTaGATCCACAAATTGGCAATGGTCTTCACCTCTTCC +
Preference number: 6 (lower is better)
Translates to: YIGLRPCSSIKV*IHKLAMVFTSS
Trigger: GGAAGAGGTGAAGACCATTGCCAATTTGTGGATTCACACCTTGATGGAAGAACAGGGCCTCAGTCCTATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp CCAATATTTTGTTCTTCAAGTCAAGAAGAAGGTCCTTaGCATTTCTCCCTTGGGGAGAAGCAGGCACAGAGG +
Preference number: 6 (lower is better)
Translates to: PIFCSSSQEEGP*HFSLGEKQAQR
Trigger: CCTCTGTGCCTGCTTCTCCCCAAGGGAGAAATGCCAAGGACCTTCTTCTTGACTTGAAGAACAAAATATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CAA 72 bp GACCGAAGGGCTGATAGGTCCGTAGCCATGAGGATTTaGTGCTTGCACTTTAAAATAATACCTCGTGTTGGG +
Preference number: 6 (lower is better)
Translates to: DRRADRSVAMRI*CLHFKIIPRVG
Trigger: CCCAACACGAGGTATTATTTTAAAGTGCAAGCACAAAATCCTCATGGCTACGGACCTATCAGCCCTTCGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CAA 90 bp GTAGGGGCAGATTCTGGTGTTCTTTGGAAGACTGACGTACTCCATTaGCCATCTCTTTCACCCTGTGAAATACGGACTGCAAATTCATAC +
Preference number: 6 (lower is better)
Translates to: VGADSGVLWKTDVLH*PSLSPCEIRTANSY
Trigger: GTATGAATTTGCAGTCCGTATTTCACAGGGTGAAAGAGATGGCAAATGGAGTACGTCAGTCTTCCAAAGAACACCAGAATCTGCCCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297267.14
ENST00000329629.8
ENST00000480856.1
CDS TCA 72 bp AACCCACGATCAAGGTCCACAACCCACTTTGTTCCTTaGGGGCCATTGATAATTCTCTGTCCATTCGGTTTT +
Preference number: 6 (lower is better)
Translates to: NPRSRSTTHFVP*GPLIILCPFGF
Trigger: AAAACCGAATGGACAGAGAATTATCAATGGCCCTCAAGGAACAAAGTGGGTTGTGGACCTTGATCGTGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 72 bp AGTGGACCACTTGTTCCTGATGAAGTCTTCATAGGATaGACTGTAAACCAAGTAACCTGTGACCACATCTCC +
Preference number: 6 (lower is better)
Translates to: SGPLVPDEVFIG*TVNQVTCDHIS
Trigger: GGAGATGTGGTCACAGGTTACTTGGTTTACAGTGCATCCTATGAAGACTTCATCAGGAACAAGTGGTCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS GCA 72 bp CGAAGGGCTGATAGGTCCGTAGCCATGAGGATTTTGTaGTTGCACTTTAAAATAATACCTCGTGTTGGGCTT +
Preference number: 6 (lower is better)
Translates to: RRADRSVAMRIL*LHFKIIPRVGL
Trigger: AAGCCCAACACGAGGTATTATTTTAAAGTGCAAGCACAAAATCCTCATGGCTACGGACCTATCAGCCCTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CAA 72 bp GATTCTGGTGTTCTTTGGAAGACTGACGTACTCCATTaGCCATCTCTTTCACCCTGTGAAATACGGACTGCA +
Preference number: 6 (lower is better)
Translates to: DSGVLWKTDVLH*PSLSPCEIRTA
Trigger: TGCAGTCCGTATTTCACAGGGTGAAAGAGATGGCAAATGGAGTACGTCAGTCTTCCAAAGAACACCAGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297267.14
ENST00000329629.8
ENST00000480856.1
CDS GCA 72 bp ATTCTGGTGTTCTTTGGAAGACTGACGTACTCCATTTaGCATCTCTTTCACCCTGTGAAATACGGACTGCAA +
Preference number: 6 (lower is better)
Translates to: ILVFFGRLTYSI*HLFHPVKYGLQ
Trigger: TTGCAGTCCGTATTTCACAGGGTGAAAGAGATGGCAAATGGAGTACGTCAGTCTTCCAAAGAACACCAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297267.14
ENST00000329629.8
ENST00000480856.1
CDS CCA 72 bp CTTTTTAATTTCGTGTGTCCGTTCATCTCTTGTCAGTaGAACATAATTCATCTTCCGGCCACTCTCCCCGTA +
Preference number: 6 (lower is better)
Translates to: LFNFVCPFISCQ*NIIHLPATLPV
Trigger: TACGGGGAGAGTGGCCGGAAGATGAATTATGTTCCACTGACAAGAGATGAACGGACACACGAAATTAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp CACTTCCTTTTCTGTGACGGTTTCATTAAATGGTCCTaGACCCTTAATGGGAAAACCATCAATCTCGATCCA +
Preference number: 6 (lower is better)
Translates to: HFLFCDGFIKWS*TLNGKTINLDP
Trigger: TGGATCGAGATTGATGGTTTTCCCATTAAGGGTCCAGGACCATTTAATGAAACCGTCACAGAAAAGGAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CAA 72 bp TTCCATTACTACCAGGAAGGACTTTCCCTTCTACATTaGGTCTGCCATTATAACCTTGTCTGTAAGAGGGTC +
Preference number: 6 (lower is better)
Translates to: FHYYQEGLSLLH*VCHYNLVCKRV
Trigger: GACCCTCTTACAGACAAGGTTATAATGGCAGACCAAATGTAGAAGGGAAAGTCCTTCCTGGTAGTAATGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8
CDS CCA 72 bp CCTAGTTTAATCCGAAGAGGATTTCCATGTGAATCTTaGAGGTACCTTCCTTCTGCATTCAATACTAACCCA +
Preference number: 6 (lower is better)
Translates to: PSLIRRGFPCES*RYLPSAFNTNP
Trigger: TGGGTTAGTATTGAATGCAGAAGGAAGGTACCTCCAAGATTCACATGGAAATCCTCTTCGGATTAAACTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297267.14
ENST00000329629.8