RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FNBP4 (Homo sapiens)

Ensembl gene IDs: ENSG00000109920

Ensembl transcript IDs: ENST00000263773.10, ENST00000524696.1, ENST00000525316.1, ENST00000525792.5, ENST00000526109.6, ENST00000527894.1, ENST00000528388.5, ENST00000529156.1, ENST00000530207.1, ENST00000531394.1, ENST00000532646.6, ENST00000533707.1, ENST00000534003.5, ENST00000540172.2, ENST00000542975.1, ENST00000544590.1, ENST00000642358.1, ENST00000642489.1, ENST00000642545.1, ENST00000643282.1, ENST00000643470.1, ENST00000643840.1, ENST00000645151.1, ENST00000645979.1, ENST00000646081.1, ENST00000646180.2, ENST00000646200.1, ENST00000646452.1, ENST00000646456.1, ENST00000646517.1, ENST00000646586.1, ENST00000647023.1

Found 349 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAAATTCTCAAAATCAAGGATATGAACACCTGCTGCTGCCTGTATaGCACCTAGTGTGCGAAACGACCGAGCTACCAGTTCTAGAACTT +
Preference number: 1 (lower is better)
Translates to: GNSQNQGYEHLLLPV*HLVCETTELPVLEL
Trigger: AAGTTCTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGGTGGCATACAGGCAGCAGCAGGTGTTCATATCCTTGATTTTGAGAATTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
3UTR GCA 90 bp AAAAAGCTTCAGACAATTCCAGTCAAGCAAGGTAGAATGCAGAGCTaGCTTCTGAATTGCACTTGTTCTGGAGGAGAAGTTAATTCTTCA +
Preference number: 1 (lower is better)
Translates to: KKLQTIPVKQGRMQS*LLNCTCSGGEVNSS
Trigger: TGAAGAATTAACTTCTCCTCCAGAACAAGTGCAATTCAGAAGGCAGCTCTGCATTCTACCTTGCTTGACTGGAATTGTCTGAAGCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
3UTR TCA 90 bp TTCTTCACTTTTGTCAGGGAGTCCTCTACAGAAGTGTTATACTCATaGGCCACATGTTCTTCAAGACTGATGAGGTTAATACACCTAACA +
Preference number: 1 (lower is better)
Translates to: FFTFVRESSTEVLYS*ATCSSRLMRLIHLT
Trigger: TGTTAGGTGTATTAACCTCATCAGTCTTGAAGAACATGTGGCTCATGAGTATAACACTTCTGTAGAGGACTCCCTGACAAAAGTGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
3UTR-3UTR GCA 90 bp CTATCAGCACGAGGTAAACCACTTAGACCTCAGCACTTCAGGGGTGGCCGACTAGGTAGAATGCAGAGCTaGCTTCTGAATTGCACTTGT +
Preference number: 2 (lower is better)
Translates to: LSARGKPLRPQHFRGGRLGRMQS*LLNCTC
Trigger: ACAAGTGCAATTCAGAAGGCAGCTCTGCATTCTACC...TAGTCGGCCACCCCTGAAGTGCTGAGGTCTAAGTGGTTTACCTCGTGCTGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
3UTR-3UTR GCA 90 bp AACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTAAACCACTTAGACCTAGTGAAAACTTTGTATaGATACACTCTTGCCCAGGA +
Preference number: 2 (lower is better)
Translates to: NYSKECGHLSARGKPLRPSENFV*IHSCPG
Trigger: TCCTGGGCAAGAGTGTATGCATACAAAGTTTTCACT...AGGTCTAAGTGGTTTACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
3UTR-3UTR CCA 90 bp TTAATACATAGAGTGTCTTGTTGTATTTACTGCCACATACTTGAGGGGAAATTCTCAGCACTTCAGGGGTaGCCGACTAGAGAAAAGAGG +
Preference number: 2 (lower is better)
Translates to: LIHRVSCCIYCHILEGKFSALQG*PTREKR
Trigger: CCTCTTTTCTCTAGTCGGCCACCCCTGAAGTGCTGA...GAATTTCCCCTCAAGTATGTGGCAGTAAATACAACAAGACACTCTATGTATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
3UTR CAA 90 bp CTTCTGAATTGCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTaGTCAGGGAGTCCTCTACAGAAGTGTTATACTCATGAGCCACAT +
Preference number: 2 (lower is better)
Translates to: LLNCTCSGGEVNSSL*SGSPLQKCYTHEPH
Trigger: ATGTGGCTCATGAGTATAACACTTCTGTAGAGGACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGCAATTCAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
3UTR-3UTR GCA 90 bp GTTCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGAGTGAAAACTTTGTATaGATACACTCTTGCCCAGGA +
Preference number: 2 (lower is better)
Translates to: VLELMRTTLKSVAIYQHESENFV*IHSCPG
Trigger: TCCTGGGCAAGAGTGTATGCATACAAAGTTTTCACT...CTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
3UTR GCA 72 bp CAAAATCAAGGATATGAACACCTGCTGCTGCCTGTATaGCACCTAGTGTGCGAAACGACCGAGCTACCAGTT +
Preference number: 3 (lower is better)
Translates to: QNQGYEHLLLPV*HLVCETTELPV
Trigger: AACTGGTAGCTCGGTCGTTTCGCACACTAGGTGGCATACAGGCAGCAGCAGGTGTTCATATCCTTGATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
3UTR-3UTR CAA 90 bp ATGCCACCTAGTGTGCGAAACGACCGAGCTACCAGTTCTAGAACTTATGAGAACGTTAATTCTTCACTTTaGTCAGGGAGTCCTCTACAG +
Preference number: 3 (lower is better)
Translates to: MPPSVRNDRATSSRTYENVNSSL*SGSPLQ
Trigger: CTGTAGAGGACTCCCTGACAAAAGTGAAGAATTAAC...GTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGGTGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
3UTR-3UTR CAA 90 bp GGCCAGAAAAAGCTTCAGACAATTCCAGTCAAGCAAGGTAGAATGCAGAGCTGCGTTAATTCTTCACTTTaGTCAGGGAGTCCTCTACAG +
Preference number: 3 (lower is better)
Translates to: GQKKLQTIPVKQGRMQSCVNSSL*SGSPLQ
Trigger: CTGTAGAGGACTCCCTGACAAAAGTGAAGAATTAAC...GCAGCTCTGCATTCTACCTTGCTTGACTGGAATTGTCTGAAGCTTTTTCTGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
3UTR GCA 72 bp CAGACAATTCCAGTCAAGCAAGGTAGAATGCAGAGCTaGCTTCTGAATTGCACTTGTTCTGGAGGAGAAGTT +
Preference number: 3 (lower is better)
Translates to: QTIPVKQGRMQS*LLNCTCSGGEV
Trigger: AACTTCTCCTCCAGAACAAGTGCAATTCAGAAGGCAGCTCTGCATTCTACCTTGCTTGACTGGAATTGTCTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
3UTR-3UTR CAA 90 bp ATGCCACCTAGTGTGCGAAACGACCGAGCTACCAGTTCTAGAACTTATGAGAACACAAAAGTGAAAACTTaGTATGCATACACTCTTGCC +
Preference number: 3 (lower is better)
Translates to: MPPSVRNDRATSSRTYENTKVKT*YAYTLA
Trigger: GGCAAGAGTGTATGCATACAAAGTTTTCACTTTTGT...GTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGGTGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
3UTR-3UTR CAA 90 bp TCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTGCTAAGTTTGCCAGTTaGAGAATAAAGGCAGCATGG +
Preference number: 3 (lower is better)
Translates to: SRTYENYSKECGHLSARGAKFAS*RIKAAW
Trigger: CCATGCTGCCTTTATTCTCAAACTGGCAAACTTAGC...ACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
3UTR CCA 72 bp CATGCTAAGTTTGCCAGTTTGAGAATAAAGGCAGCATaGTCAAAGCAATTCCAATCACCTCATCCCTTTGCA +
Preference number: 3 (lower is better)
Translates to: HAKFASLRIKAA*SKQFQSPHPFA
Trigger: TGCAAAGGGATGAGGTGATTGGAATTGCTTTGACCATGCTGCCTTTATTCTCAAACTGGCAAACTTAGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
3UTR-3UTR CAA 90 bp ACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTAAACCACTTAGACCTCTGTATGCATACACTCTaGCCCAGGAAATTTATAAGA +
Preference number: 3 (lower is better)
Translates to: TTLKSVAIYQHEVNHLDLCMHTL*PRKFIR
Trigger: TCTTATAAATTTCCTGGGCAAGAGTGTATGCATACA...GAGGTCTAAGTGGTTTACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
3UTR-3UTR CAA 90 bp CGACTAGAGAAAAGAGGCCAGAAAAAGCTTCAGACAATTCCAGTCAAGCAAGGTTGTATGCATACACTCTaGCCCAGGAAATTTATAAGA +
Preference number: 3 (lower is better)
Translates to: RLEKRGQKKLQTIPVKQGCMHTL*PRKFIR
Trigger: TCTTATAAATTTCCTGGGCAAGAGTGTATGCATACA...ACCTTGCTTGACTGGAATTGTCTGAAGCTTTTTCTGGCCTCTTTTCTCTAGTCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
3UTR-3UTR CAA 90 bp AACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTAAACCACTTAGACCTACAAAAGTGAAAACTTaGTATGCATACACTCTTGCC +
Preference number: 3 (lower is better)
Translates to: NYSKECGHLSARGKPLRPTKVKT*YAYTLA
Trigger: GGCAAGAGTGTATGCATACAAAGTTTTCACTTTTGT...AGGTCTAAGTGGTTTACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp CTATCAGCACGAGGTAAACCACTTAGACCTCAGCACTTCAGGGGTGGCCGACTACCCGGCGGAGAGAGTTaGAGGATGGGCCTACGGCCG +
Preference number: 4 (lower is better)
Translates to: LSARGKPLRPQHFRGGRLPGGES*RMGLRP
Trigger: CGGCCGTAGGCCCATCCTGCAACTCTCTCCGCCGGG...TAGTCGGCCACCCCTGAAGTGCTGAGGTCTAAGTGGTTTACCTCGTGCTGATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp CTATCAGCACGAGGTAAACCACTTAGACCTCAGCACTTCAGGGGTGGCCGACTAGAGAGAGTTGCAGGATaGGCCTACGGCCGGGTACCG +
Preference number: 4 (lower is better)
Translates to: LSARGKPLRPQHFRGGRLERVAG*AYGRVP
Trigger: CGGTACCCGGCCGTAGGCCCATCCTGCAACTCTCTC...TAGTCGGCCACCCCTGAAGTGCTGAGGTCTAAGTGGTTTACCTCGTGCTGATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp CCTAGTGTGCGAAACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTACTCTTCACCGCGGTGGTGGTaGTCGTCGCCGCCGACGGGG +
Preference number: 4 (lower is better)
Translates to: PSVRNDRATSSRTYENYSSPRWW*SSPPTG
Trigger: CCCCGTCGGCGGCGACGACCACCACCACCGCGGTGA...AGAGTAGTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp CGACTAGAGAAAAGAGGCCAGAAAAAGCTTCAGACAATTCCAGTCAAGCAAGGTACGGGGCGGGCTGGCTaGGGACCGCCGCGGTTGAGT +
Preference number: 4 (lower is better)
Translates to: RLEKRGQKKLQTIPVKQGTGRAG*GPPRLS
Trigger: ACTCAACCGCGGCGGTCCCCAGCCAGCCCGCCCCGT...ACCTTGCTTGACTGGAATTGTCTGAAGCTTTTTCTGGCCTCTTTTCTCTAGTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp TTGTCAGGGAGTCCTCTACAGAAGTGTTATACTCATGAGCCACATGTTCTTCAAACGGGGCGGGCTGGCTaGGGACCGCCGCGGTTGAGT +
Preference number: 4 (lower is better)
Translates to: LSGSPLQKCYTHEPHVLQTGRAG*GPPRLS
Trigger: ACTCAACCGCGGCGGTCCCCAGCCAGCCCGCCCCGT...TTGAAGAACATGTGGCTCATGAGTATAACACTTCTGTAGAGGACTCCCTGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp AACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTAAACCACTTAGACCTCAGTCACCGCGGTGGTaGTGGTCGTCGCCGCCGACG +
Preference number: 4 (lower is better)
Translates to: NYSKECGHLSARGKPLRPQSPRW*WSSPPT
Trigger: CGTCGGCGGCGACGACCACCACCACCGCGGTGACTG...AGGTCTAAGTGGTTTACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp CTTTTGTCAGGGAGTCCTCTACAGAAGTGTTATACTCATGAGCCACATGTTCTTCGGCAGTCACCGCGGTaGTGGTGGTCGTCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: LLSGSPLQKCYTHEPHVLRQSPR*WWSSPP
Trigger: CGGCGGCGACGACCACCACCACCGCGGTGACTGCCG...AAGAACATGTGGCTCATGAGTATAACACTTCTGTAGAGGACTCCCTGACAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp GCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTTGTCAGGGAGTCCTCTACCCCGGCGGAGAGAGTTaGAGGATGGGCCTACGGCCG +
Preference number: 4 (lower is better)
Translates to: ALVLEEKLILHFCQGVLYPGGES*RMGLRP
Trigger: CGGCCGTAGGCCCATCCTGCAACTCTCTCCGCCGGG...GTAGAGGACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp ATGCCACCTAGTGTGCGAAACGACCGAGCTACCAGTTCTAGAACTTATGAGAACGAGAGAGTTGCAGGATaGGCCTACGGCCGGGTACCG +
Preference number: 4 (lower is better)
Translates to: MPPSVRNDRATSSRTYENERVAG*AYGRVP
Trigger: CGGTACCCGGCCGTAGGCCCATCCTGCAACTCTCTC...GTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGGTGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp CTGAATTGCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTTGTCAGGGAGTCGGCAGTCACCGCGGTaGTGGTGGTCGTCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: LNCTCSGGEVNSSLLSGSRQSPR*WWSSPP
Trigger: CGGCGGCGACGACCACCACCACCGCGGTGACTGCCG...ACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGCAATTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp CTGAATTGCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTTGTCAGGGAGTCAGTCACCGCGGTGGTaGTGGTCGTCGCCGCCGACG +
Preference number: 4 (lower is better)
Translates to: LNCTCSGGEVNSSLLSGSQSPRW*WSSPPT
Trigger: CGTCGGCGGCGACGACCACCACCACCGCGGTGACTG...ACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGCAATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp CTATCAGCACGAGGTAAACCACTTAGACCTCAGCACTTCAGGGGTGGCCGACTATCGCTTCTGTGCAGTTaGTTCCCGATCCTCTTCACT +
Preference number: 4 (lower is better)
Translates to: LSARGKPLRPQHFRGGRLSLLCS*FPILFT
Trigger: AGTGAAGAGGATCGGGAATCAACTGCACAGAAGCGA...TAGTCGGCCACCCCTGAAGTGCTGAGGTCTAAGTGGTTTACCTCGTGCTGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp GGCCAGAAAAAGCTTCAGACAATTCCAGTCAAGCAAGGTAGAATGCAGAGCTGCTGGCTCTGGTCGAGGTaGAGTTGGAGGTGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: GQKKLQTIPVKQGRMQSCWLWSR*SWRWSR
Trigger: TCTGCTCCACCTCCAACTCCACCTCGACCAGAGCCA...GCAGCTCTGCATTCTACCTTGCTTGACTGGAATTGTCTGAAGCTTTTTCTGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp CTATCAGCACGAGGTAAACCACTTAGACCTCAGCACTTCAGGGGTGGCCGACTACACCTGGCACAGAACTaGGCTGGTAATGCTGTAATC +
Preference number: 4 (lower is better)
Translates to: LSARGKPLRPQHFRGGRLHLAQN*AGNAVI
Trigger: GATTACAGCATTACCAGCCCAGTTCTGTGCCAGGTG...TAGTCGGCCACCCCTGAAGTGCTGAGGTCTAAGTGGTTTACCTCGTGCTGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp CCTAGTGTGCGAAACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTACTCTACAGGAGCTGCAGGCTaGGGAGCTGTTATGGCATCG +
Preference number: 4 (lower is better)
Translates to: PSVRNDRATSSRTYENYSTGAAG*GAVMAS
Trigger: CGATGCCATAACAGCTCCTCAGCCTGCAGCTCCTGT...AGAGTAGTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp ACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCTCTGGAAACTCCCACTaGGACTCGCCCGACTGTTCG +
Preference number: 4 (lower is better)
Translates to: TTELPVLELMRTTLKSVASGNSH*DSPDCS
Trigger: CGAACAGTCGGGCGAGTCTCAGTGGGAGTTTCCAGA...GGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp CCTAGTGTGCGAAACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTACTCTTCTGGAAACTCCCACTaGGACTCGCCCGACTGTTCG +
Preference number: 4 (lower is better)
Translates to: PSVRNDRATSSRTYENYSSGNSH*DSPDCS
Trigger: CGAACAGTCGGGCGAGTCTCAGTGGGAGTTTCCAGA...AGAGTAGTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp CTATCAGCACGAGGTAAACCACTTAGACCTCAGCACTTCAGGGGTGGCCGACTAACCTGTAGCTATAGCTaGCTGGCTATAGAGAACTGG +
Preference number: 4 (lower is better)
Translates to: LSARGKPLRPQHFRGGRLTCSYS*LAIENW
Trigger: CCAGTTCTCTATAGCCAGTCAGCTATAGCTACAGGT...TAGTCGGCCACCCCTGAAGTGCTGAGGTCTAAGTGGTTTACCTCGTGCTGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp CTATCAGCACGAGGTAAACCACTTAGACCTCAGCACTTCAGGGGTGGCCGACTAATGACCCATTCCTGCTaGTGGAAGGCTAACTGGTAT +
Preference number: 4 (lower is better)
Translates to: LSARGKPLRPQHFRGGRLMTHSC*WKANWY
Trigger: ATACCAGTTAGCCTTCCAGCAGCAGGAATGGGTCAT...TAGTCGGCCACCCCTGAAGTGCTGAGGTCTAAGTGGTTTACCTCGTGCTGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp CCTAGTGTGCGAAACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTACTCTTGGTCGAGGTGGAGTTaGAGGTGGAGCAGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: PSVRNDRATSSRTYENYSWSRWS*RWSRSS
Trigger: GGAGCTTCTGCTCCACCTCCAACTCCACCTCGACCA...AGAGTAGTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp CTATCAGCACGAGGTAAACCACTTAGACCTCAGCACTTCAGGGGTGGCCGACTATTCCTCTTCACCATCTaGAAACTCCCACTGAGACTC +
Preference number: 4 (lower is better)
Translates to: LSARGKPLRPQHFRGGRLFLFTI*KLPLRL
Trigger: GAGTCTCAGTGGGAGTTTCCAGATGGTGAAGAGGAA...TAGTCGGCCACCCCTGAAGTGCTGAGGTCTAAGTGGTTTACCTCGTGCTGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp CCTAGTGTGCGAAACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTACTCTATCTTCCTCTGTTCCTaGGGCAGGGGGCTCCTCACT +
Preference number: 4 (lower is better)
Translates to: PSVRNDRATSSRTYENYSIFLCS*GRGLLT
Trigger: AGTGAGGAGCCCCCTGCCCCAGGAACAGAGGAAGAT...AGAGTAGTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp ACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCTGGCATTTTGGGAGCTaGTGGTGGTGGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: TTELPVLELMRTTLKSVAWHFGS*WWWRRR
Trigger: CCTCCTCCTCCACCACCACCAGCTCCCAAAATGCCA...GGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp ACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTAAACCACTTAGACCTCCAGGTGGTGGCATTTTaGGAGCTGGTGGTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: TTLKSVAIYQHEVNHLDLQVVAF*ELVVVE
Trigger: CTCCACCACCACCAGCTCCCAAAATGCCACCACCTG...GAGGTCTAAGTGGTTTACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp GGCCAGAAAAAGCTTCAGACAATTCCAGTCAAGCAAGGTAGAATGCAGAGCTGCACTGCCAATGGTAGCTaGCCTCTGAACCACTGCAGT +
Preference number: 4 (lower is better)
Translates to: GQKKLQTIPVKQGRMQSCTANGS*PLNHCS
Trigger: ACTGCAGTGGTTCAGAGGTCAGCTACCATTGGCAGT...GCAGCTCTGCATTCTACCTTGCTTGACTGGAATTGTCTGAAGCTTTTTCTGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp CTATCAGCACGAGGTAAACCACTTAGACCTCAGCACTTCAGGGGTGGCCGACTACTAACTGGTATTGTCTaGTGTCCAATTCCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: LSARGKPLRPQHFRGGRLLTGIV*CPIPVA
Trigger: GGCAACAGGAATTGGACATCAGACAATACCAGTTAG...TAGTCGGCCACCCCTGAAGTGCTGAGGTCTAAGTGGTTTACCTCGTGCTGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp CTATCAGCACGAGGTAAACCACTTAGACCTCAGCACTTCAGGGGTGGCCGACTACATTCCATCTTGAGATaGTGGCTGGCTGATATCAGA +
Preference number: 4 (lower is better)
Translates to: LSARGKPLRPQHFRGGRLHSILR*WLADIR
Trigger: TCTGATATCAGCCAGCCAGCATCTCAAGATGGAATG...TAGTCGGCCACCCCTGAAGTGCTGAGGTCTAAGTGGTTTACCTCGTGCTGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp ACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTAAACCACTTAGACCTCCCCTTCCCGCCAGTCTaGAATTCGAGTCTCAGTCTG +
Preference number: 4 (lower is better)
Translates to: TTLKSVAIYQHEVNHLDLPFPPV*NSSLSL
Trigger: CAGACTGAGACTCGAATTGCAGACTGGCGGGAAGGG...GAGGTCTAAGTGGTTTACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp ATGCCACCTAGTGTGCGAAACGACCGAGCTACCAGTTCTAGAACTTATGAGAACCTGATGACCCATTCCTaGTGCTGGAAGGCTAACTGG +
Preference number: 4 (lower is better)
Translates to: MPPSVRNDRATSSRTYENLMTHS*CWKANW
Trigger: CCAGTTAGCCTTCCAGCAGCAGGAATGGGTCATCAG...GTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGGTGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp CCTAGTGTGCGAAACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTACTCTCTGCTGCTGCCTGTATaGCACCTAGTGTGCGAAACG +
Preference number: 4 (lower is better)
Translates to: PSVRNDRATSSRTYENYSLLLPV*HLVCET
Trigger: CGTTTCGCACACTAGGTGGCATACAGGCAGCAGCAG...AGAGTAGTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp ACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTAAACCACTTAGACCTCTTCTGGAGGTGGAGGTaGGGGTGGTGGCATTTCCAA +
Preference number: 4 (lower is better)
Translates to: TTLKSVAIYQHEVNHLDLFWRWR*GWWHFQ
Trigger: TTGGAAATGCCACCACCCCCACCTCCACCTCCAGAA...GAGGTCTAAGTGGTTTACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp AACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTAAACCACTTAGACCTATCTTCCTCTGTTCCTaGGGCAGGGGGCTCCTCACT +
Preference number: 4 (lower is better)
Translates to: NYSKECGHLSARGKPLRPIFLCS*GRGLLT
Trigger: AGTGAGGAGCCCCCTGCCCCAGGAACAGAGGAAGAT...AGGTCTAAGTGGTTTACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp AACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTAAACCACTTAGACCTTGGCATTTTGGGAGCTaGTGGTGGTGGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: NYSKECGHLSARGKPLRPWHFGS*WWWRRR
Trigger: CCTCCTCCTCCACCACCACCAGCTCCCAAAATGCCA...AGGTCTAAGTGGTTTACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp CGACTAGAGAAAAGAGGCCAGAAAAAGCTTCAGACAATTCCAGTCAAGCAAGGTCAGGTGGTGGCATTTTaGGAGCTGGTGGTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: RLEKRGQKKLQTIPVKQGQVVAF*ELVVVE
Trigger: CTCCACCACCACCAGCTCCCAAAATGCCACCACCTG...ACCTTGCTTGACTGGAATTGTCTGAAGCTTTTTCTGGCCTCTTTTCTCTAGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp AACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTAAACCACTTAGACCTTTCCTGTTCATCTTCTaGAGGCGAGTCGTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: NYSKECGHLSARGKPLRPFLFIF*RRVVRG
Trigger: GCCTCGGACGACTCGCCTTCAGAAGATGAACAGGAA...AGGTCTAAGTGGTTTACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp GCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTTGTCAGGGAGTCCTCTACTTCCTGTTCATCTTCTaGAGGCGAGTCGTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: ALVLEEKLILHFCQGVLYFLFIF*RRVVRG
Trigger: GCCTCGGACGACTCGCCTTCAGAAGATGAACAGGAA...GTAGAGGACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp ATGCCACCTAGTGTGCGAAACGACCGAGCTACCAGTTCTAGAACTTATGAGAACACTCTAGGAACCTCCTaGACCGCTTCCTGTTCATCT +
Preference number: 4 (lower is better)
Translates to: MPPSVRNDRATSSRTYENTLGTS*TASCSS
Trigger: AGATGAACAGGAAGCGGTGCAGGAGGTTCCTAGAGT...GTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGGTGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp AACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTAAACCACTTAGACCTCCCTTCCCGCCAGTCTaGAATTCGAGTCTCAGTCTG +
Preference number: 4 (lower is better)
Translates to: NYSKECGHLSARGKPLRPPFPPV*NSSLSL
Trigger: CAGACTGAGACTCGAATTGCAGACTGGCGGGAAGGG...AGGTCTAAGTGGTTTACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp GGCCAGAAAAAGCTTCAGACAATTCCAGTCAAGCAAGGTAGAATGCAGAGCTGCGTTTCCAATCCCTGCTaGCTGGTGACCTGTAGCTAT +
Preference number: 4 (lower is better)
Translates to: GQKKLQTIPVKQGRMQSCVSNPC*LVTCSY
Trigger: ATAGCTACAGGTCACCAGGCAGCAGGGATTGGAAAC...GCAGCTCTGCATTCTACCTTGCTTGACTGGAATTGTCTGAAGCTTTTTCTGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp GCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTTGTCAGGGAGTCCTCTACCTGGTTTCCAATCCCTaGTGCCTGGTGACCTGTAGC +
Preference number: 4 (lower is better)
Translates to: ALVLEEKLILHFCQGVLYLVSNP*CLVTCS
Trigger: GCTACAGGTCACCAGGCAGCAGGGATTGGAAACCAG...GTAGAGGACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp CCTAGTGTGCGAAACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTACTCTGTATGCCACCTAGTGTaGGAAACGACCGAGCTACCA +
Preference number: 4 (lower is better)
Translates to: PSVRNDRATSSRTYENYSVCHLV*ETTELP
Trigger: TGGTAGCTCGGTCGTTTCGCACACTAGGTGGCATAC...AGAGTAGTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp ACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTAAACCACTTAGACCTCGTATGCCACCTAGTGTaGGAAACGACCGAGCTACCA +
Preference number: 4 (lower is better)
Translates to: TTLKSVAIYQHEVNHLDLVCHLV*ETTELP
Trigger: TGGTAGCTCGGTCGTTTCGCACACTAGGTGGCATAC...GAGGTCTAAGTGGTTTACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp GCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTTGTCAGGGAGTCCTCTACAGGTGGAGTTGGAGGTaGAGCAGAAGCTCCTACAGG +
Preference number: 4 (lower is better)
Translates to: ALVLEEKLILHFCQGVLYRWSWR*SRSSYR
Trigger: CCTGTAGGAGCTTCTGCTCCACCTCCAACTCCACCT...GTAGAGGACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp GTTCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGTGGTCGAGGTGGAGTTaGAGGTGGAGCAGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: VLELMRTTLKSVAIYQHEWSRWS*RWSRSS
Trigger: GGAGCTTCTGCTCCACCTCCAACTCCACCTCGACCA...CTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp TTGTCAGGGAGTCCTCTACAGAAGTGTTATACTCATGAGCCACATGTTCTTCAATGGCTCTGGTCGAGGTaGAGTTGGAGGTGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LSGSPLQKCYTHEPHVLQWLWSR*SWRWSR
Trigger: TCTGCTCCACCTCCAACTCCACCTCGACCAGAGCCA...TTGAAGAACATGTGGCTCATGAGTATAACACTTCTGTAGAGGACTCCCTGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp ACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCTGTTGCTGCTTCCTTTaGCTCTGGTCGAGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: TTELPVLELMRTTLKSVACCCFL*LWSRWS
Trigger: ACTCCACCTCGACCAGAGCCAAAGGAAGCAGCAACA...GGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp ATGCCACCTAGTGTGCGAAACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTCCATCTCTACCTCCTaGATCTCACCATCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: MPPSVRNDRATSSRTYENSISTS*ISPSSA
Trigger: TGCGGAAGATGGTGAGATCCAGGAGGTAGAGATGGA...GTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGGTGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp ATGCCACCTAGTGTGCGAAACGACCGAGCTACCAGTTCTAGAACTTATGAGAACAGGAGGTGGTGGTGGTaGTTCTATAATGGTAGCGGT +
Preference number: 4 (lower is better)
Translates to: MPPSVRNDRATSSRTYENRRWWW*FYNGSG
Trigger: ACCGCTACCATTATAGAACCACCACCACCACCTCCT...GTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGGTGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp GGCCAGAAAAAGCTTCAGACAATTCCAGTCAAGCAAGGTAGAATGCAGAGCTGCAGGAGGAGGAGGTGGTaGTGGTGGTTCTATAATGGT +
Preference number: 4 (lower is better)
Translates to: GQKKLQTIPVKQGRMQSCRRRRW*WWFYNG
Trigger: ACCATTATAGAACCACCACCACCACCTCCTCCTCCT...GCAGCTCTGCATTCTACCTTGCTTGACTGGAATTGTCTGAAGCTTTTTCTGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp ATGCCACCTAGTGTGCGAAACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTGTCTTTTCAGGTGGTaGCATTTTGGGAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: MPPSVRNDRATSSRTYENCLFRW*HFGSWW
Trigger: CCACCAGCTCCCAAAATGCCACCACCTGAAAAGACA...GTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGGTGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp ACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTAAACCACTTAGACCTCTCAGCACTTCAGGGGTaGCCGACTAGAGAAAAGAGG +
Preference number: 4 (lower is better)
Translates to: TTLKSVAIYQHEVNHLDLSALQG*PTREKR
Trigger: CCTCTTTTCTCTAGTCGGCCACCCCTGAAGTGCTGA...GAGGTCTAAGTGGTTTACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp ATGCCACCTAGTGTGCGAAACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTCCGACTCCTGCCAGTaGACACTGAGTATCATATTG +
Preference number: 4 (lower is better)
Translates to: MPPSVRNDRATSSRTYENSDSCQ*TLSIIL
Trigger: CAATATGATACTCAGTGTTCACTGGCAGGAGTCGGA...GTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGGTGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp AACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTAAACCACTTAGACCTACGTGGACTAGACCCTaGCACACTACCATCTCCTTC +
Preference number: 4 (lower is better)
Translates to: NYSKECGHLSARGKPLRPTWTRP*HTTISF
Trigger: GAAGGAGATGGTAGTGTGTCAGGGTCTAGTCCACGT...AGGTCTAAGTGGTTTACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp GCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTTGTCAGGGAGTCCTCTACACGTGGACTAGACCCTaGCACACTACCATCTCCTTC +
Preference number: 4 (lower is better)
Translates to: ALVLEEKLILHFCQGVLYTWTRP*HTTISF
Trigger: GAAGGAGATGGTAGTGTGTCAGGGTCTAGTCCACGT...GTAGAGGACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp TTGTCAGGGAGTCCTCTACAGAAGTGTTATACTCATGAGCCACATGTTCTTCAAAGGAGCAAGCAGCGATaGTGCCACCCCTTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LSGSPLQKCYTHEPHVLQRSKQR*CHPFLL
Trigger: GAGAAGAAAGGGGTGGCAGCATCGCTGCTTGCTCCT...TTGAAGAACATGTGGCTCATGAGTATAACACTTCTGTAGAGGACTCCCTGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp GTTCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGAGGAGCAAGCAGCGATaGTGCCACCCCTTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: VLELMRTTLKSVAIYQHERSKQR*CHPFLL
Trigger: GAGAAGAAAGGGGTGGCAGCATCGCTGCTTGCTCCT...CTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp TCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTCTGGTTTCCAATCCCTaGTGCCTGGTGACCTGTAGC +
Preference number: 4 (lower is better)
Translates to: SRTYENYSKECGHLSARGLVSNP*CLVTCS
Trigger: GCTACAGGTCACCAGGCAGCAGGGATTGGAAACCAG...ACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp CTATCAGCACGAGGTAAACCACTTAGACCTCAGCACTTCAGGGGTGGCCGACTAGGTCTTACTCTTCTTTaGCTTGTCTTTCCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: LSARGKPLRPQHFRGGRLGLTLL*LVFPSF
Trigger: AAAGGAAGGAAAGACAAGGCAAAGAAGAGTAAGACC...TAGTCGGCCACCCCTGAAGTGCTGAGGTCTAAGTGGTTTACCTCGTGCTGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp TTGTCAGGGAGTCCTCTACAGAAGTGTTATACTCATGAGCCACATGTTCTTCAACTGCTGCTGCCTGTATaGCACCTAGTGTGCGAAACG +
Preference number: 4 (lower is better)
Translates to: LSGSPLQKCYTHEPHVLQLLLPV*HLVCET
Trigger: CGTTTCGCACACTAGGTGGCATACAGGCAGCAGCAG...TTGAAGAACATGTGGCTCATGAGTATAACACTTCTGTAGAGGACTCCCTGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp CGACTAGAGAAAAGAGGCCAGAAAAAGCTTCAGACAATTCCAGTCAAGCAAGGTGCTGAGGAGCTGTTATaGCATCGATCTCCGCTAGGA +
Preference number: 4 (lower is better)
Translates to: RLEKRGQKKLQTIPVKQGAEELL*HRSPLG
Trigger: TCCTAGCGGAGATCGATGCCATAACAGCTCCTCAGC...ACCTTGCTTGACTGGAATTGTCTGAAGCTTTTTCTGGCCTCTTTTCTCTAGTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp GCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTTGTCAGGGAGTCCTCTACTGTTGCTGCTTCCTTTaGCTCTGGTCGAGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: ALVLEEKLILHFCQGVLYCCCFL*LWSRWS
Trigger: ACTCCACCTCGACCAGAGCCAAAGGAAGCAGCAACA...GTAGAGGACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp CCTAGTGTGCGAAACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTACTCTTCCATCTCTACCTCCTaGATCTCACCATCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: PSVRNDRATSSRTYENYSSISTS*ISPSSA
Trigger: TGCGGAAGATGGTGAGATCCAGGAGGTAGAGATGGA...AGAGTAGTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp ACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTAAACCACTTAGACCTCAGGAGGTGGTGGTGGTaGTTCTATAATGGTAGCGGT +
Preference number: 4 (lower is better)
Translates to: TTLKSVAIYQHEVNHLDLRRWWW*FYNGSG
Trigger: ACCGCTACCATTATAGAACCACCACCACCACCTCCT...GAGGTCTAAGTGGTTTACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp ACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCAGGAGGAGGTGGTGGTaGTGGTTCTATAATGGTAGC +
Preference number: 4 (lower is better)
Translates to: TTELPVLELMRTTLKSVARRRWW*WFYNGS
Trigger: GCTACCATTATAGAACCACCACCACCACCTCCTCCT...GGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp GCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTTGTCAGGGAGTCCTCTACTCAGCACTTCAGGGGTaGCCGACTAGAGAAAAGAGG +
Preference number: 4 (lower is better)
Translates to: ALVLEEKLILHFCQGVLYSALQG*PTREKR
Trigger: CCTCTTTTCTCTAGTCGGCCACCCCTGAAGTGCTGA...GTAGAGGACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp ACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCCCTGCCAGTGAACACTaGGTATCATATTGCCAACCA +
Preference number: 4 (lower is better)
Translates to: TTELPVLELMRTTLKSVAPASEH*VSYCQP
Trigger: TGGTTGGCAATATGATACTCAGTGTTCACTGGCAGG...GGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp CCTAGTGTGCGAAACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTACTCTCTTCTCGCTTGGCTATaGCTGGTCCACTTTTACTAC +
Preference number: 4 (lower is better)
Translates to: PSVRNDRATSSRTYENYSLLAWL*LVHFYY
Trigger: GTAGTAAAAGTGGACCAGTCATAGCCAAGCGAGAAG...AGAGTAGTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp GGCCAGAAAAAGCTTCAGACAATTCCAGTCAAGCAAGGTAGAATGCAGAGCTGCAACTGTGGTTTGTGCTaGAGGTTTCAAAGGGGTATC +
Preference number: 4 (lower is better)
Translates to: GQKKLQTIPVKQGRMQSCNCGLC*RFQRGI
Trigger: GATACCCCTTTGAAACCTTCAGCACAAACCACAGTT...GCAGCTCTGCATTCTACCTTGCTTGACTGGAATTGTCTGAAGCTTTTTCTGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp TCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTACTGCCAATGGTAGCTaGCCTCTGAACCACTGCAGT +
Preference number: 4 (lower is better)
Translates to: SRTYENYSKECGHLSARGTANGS*PLNHCS
Trigger: ACTGCAGTGGTTCAGAGGTCAGCTACCATTGGCAGT...ACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp GTTCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGCTGAACTGGCTGCAATaGGGGAGCAGTCACTCCAAT +
Preference number: 4 (lower is better)
Translates to: VLELMRTTLKSVAIYQHELNWLQ*GSSHSN
Trigger: ATTGGAGTGACTGCTCCCTCATTGCAGCCAGTTCAG...CTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp GGCCAGAAAAAGCTTCAGACAATTCCAGTCAAGCAAGGTAGAATGCAGAGCTGCTCAAAATCAAGGATATaGACACCTGCTGCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: GQKKLQTIPVKQGRMQSCSKSRI*TPAAAC
Trigger: ACAGGCAGCAGCAGGTGTTCATATCCTTGATTTTGA...GCAGCTCTGCATTCTACCTTGCTTGACTGGAATTGTCTGAAGCTTTTTCTGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp CGACTAGAGAAAAGAGGCCAGAAAAAGCTTCAGACAATTCCAGTCAAGCAAGGTACTCTAGGAACCTCCTaGACCGCTTCCTGTTCATCT +
Preference number: 4 (lower is better)
Translates to: RLEKRGQKKLQTIPVKQGTLGTS*TASCSS
Trigger: AGATGAACAGGAAGCGGTGCAGGAGGTTCCTAGAGT...ACCTTGCTTGACTGGAATTGTCTGAAGCTTTTTCTGGCCTCTTTTCTCTAGTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp GTTCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGAGCTCCTACAGGAGCTaGAGGCTGAGGAGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: VLELMRTTLKSVAIYQHESSYRS*RLRSCY
Trigger: ATAACAGCTCCTCAGCCTGCAGCTCCTGTAGGAGCT...CTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp CGACTAGAGAAAAGAGGCCAGAAAAAGCTTCAGACAATTCCAGTCAAGCAAGGTAAGGGTAGATGTTGCTaGTTCCTTTGGCTCTGGTCG +
Preference number: 4 (lower is better)
Translates to: RLEKRGQKKLQTIPVKQGKGRCC*FLWLWS
Trigger: CGACCAGAGCCAAAGGAAGCAGCAACATCTACCCTT...ACCTTGCTTGACTGGAATTGTCTGAAGCTTTTTCTGGCCTCTTTTCTCTAGTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp GCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTTGTCAGGGAGTCCTCTACAAGGGTAGATGTTGCTaGTTCCTTTGGCTCTGGTCG +
Preference number: 4 (lower is better)
Translates to: ALVLEEKLILHFCQGVLYKGRCC*FLWLWS
Trigger: CGACCAGAGCCAAAGGAAGCAGCAACATCTACCCTT...GTAGAGGACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp ACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTAAACCACTTAGACCTCAGAAAGGGTAGATGTTaGTGCTTCCTTTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: TTLKSVAIYQHEVNHLDLRKGRC*CFLWLW
Trigger: CCAGAGCCAAAGGAAGCAGCAACATCTACCCTTTCT...GAGGTCTAAGTGGTTTACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp ACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCTCATCCCAGACTTCCTaGCAATCGCCCATCTCAATT +
Preference number: 4 (lower is better)
Translates to: TTELPVLELMRTTLKSVASSQTS*QSPISI
Trigger: AATTGAGATGGGCGATTGGCAGGAAGTCTGGGATGA...GGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp TTGTCAGGGAGTCCTCTACAGAAGTGTTATACTCATGAGCCACATGTTCTTCAACTGATGACCCATTCCTaGTGCTGGAAGGCTAACTGG +
Preference number: 4 (lower is better)
Translates to: LSGSPLQKCYTHEPHVLQLMTHS*CWKANW
Trigger: CCAGTTAGCCTTCCAGCAGCAGGAATGGGTCATCAG...TTGAAGAACATGTGGCTCATGAGTATAACACTTCTGTAGAGGACTCCCTGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp GGCCAGAAAAAGCTTCAGACAATTCCAGTCAAGCAAGGTAGAATGCAGAGCTGCCCACTAACCAGCTGCTaGTGTTTCCACTCTTCAATT +
Preference number: 4 (lower is better)
Translates to: GQKKLQTIPVKQGRMQSCPLTSC*CFHSSI
Trigger: AATTGAAGAGTGGAAACAGCAGCAGCTGGTTAGTGG...GCAGCTCTGCATTCTACCTTGCTTGACTGGAATTGTCTGAAGCTTTTTCTGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp CGACTAGAGAAAAGAGGCCAGAAAAAGCTTCAGACAATTCCAGTCAAGCAAGGTCCTTCTCTTCAGCCTTaGTCTCCAATCCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RLEKRGQKKLQTIPVKQGPSLQP*SPILRK
Trigger: CTTCCTGAGGATTGGAGAGCAAGGCTGAAGAGAAGG...ACCTTGCTTGACTGGAATTGTCTGAAGCTTTTTCTGGCCTCTTTTCTCTAGTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp CTGAATTGCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTTGTCAGGGAGTAGGTGGAGTTGGAGGTaGAGCAGAAGCTCCTACAGG +
Preference number: 4 (lower is better)
Translates to: LNCTCSGGEVNSSLLSGSRWSWR*SRSSYR
Trigger: CCTGTAGGAGCTTCTGCTCCACCTCCAACTCCACCT...ACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGCAATTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp AACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTAAACCACTTAGACCTACTAGTTTCAGCACCTaGCACAGAACTGGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: NYSKECGHLSARGKPLRPTSFST*HRTGLV
Trigger: TACCAGCCCAGTTCTGTGCCAGGTGCTGAAACTAGT...AGGTCTAAGTGGTTTACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp ATGCCACCTAGTGTGCGAAACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTCGCTTGGCTATGACTaGTCCACTTTTACTACTGGA +
Preference number: 4 (lower is better)
Translates to: MPPSVRNDRATSSRTYENSLGYD*STFTTG
Trigger: TCCAGTAGTAAAAGTGGACCAGTCATAGCCAAGCGA...GTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGGTGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp ACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCTCCATCTTGAGATGCTaGCTGGCTGATATCAGAACG +
Preference number: 4 (lower is better)
Translates to: TTELPVLELMRTTLKSVASILRC*LADIRT
Trigger: CGTTCTGATATCAGCCAGCCAGCATCTCAAGATGGA...GGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp CCTAGTGTGCGAAACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTACTCTACCCATTCCTGCTGCTaGAAGGCTAACTGGTATTGT +
Preference number: 4 (lower is better)
Translates to: PSVRNDRATSSRTYENYSTHSCC*KANWYC
Trigger: ACAATACCAGTTAGCCTTCCAGCAGCAGGAATGGGT...AGAGTAGTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp GCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTTGTCAGGGAGTCCTCTACAGGAGGAGGTGGTGGTaGTGGTTCTATAATGGTAGC +
Preference number: 4 (lower is better)
Translates to: ALVLEEKLILHFCQGVLYRRRWW*WFYNGS
Trigger: GCTACCATTATAGAACCACCACCACCACCTCCTCCT...GTAGAGGACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp AACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTAAACCACTTAGACCTAGGAGGAGGAGGTGGTaGTGGTGGTTCTATAATGGT +
Preference number: 4 (lower is better)
Translates to: NYSKECGHLSARGKPLRPRRRRW*WWFYNG
Trigger: ACCATTATAGAACCACCACCACCACCTCCTCCTCCT...AGGTCTAAGTGGTTTACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp GGCCAGAAAAAGCTTCAGACAATTCCAGTCAAGCAAGGTAGAATGCAGAGCTGCGGAGTCTGTTCCATTTaGAGTAGAAGAAGAAAGGGT +
Preference number: 4 (lower is better)
Translates to: GQKKLQTIPVKQGRMQSCGVCSI*SRRRKG
Trigger: ACCCTTTCTTCTTCTACTTCAAATGGAACAGACTCC...GCAGCTCTGCATTCTACCTTGCTTGACTGGAATTGTCTGAAGCTTTTTCTGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp AACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTAAACCACTTAGACCTCCTGCCAGTGAACACTaGGTATCATATTGCCAACCA +
Preference number: 4 (lower is better)
Translates to: NYSKECGHLSARGKPLRPPASEH*VSYCQP
Trigger: TGGTTGGCAATATGATACTCAGTGTTCACTGGCAGG...AGGTCTAAGTGGTTTACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp TTGTCAGGGAGTCCTCTACAGAAGTGTTATACTCATGAGCCACATGTTCTTCAACTACGCATTCCATCTTaGGATGCTGGCTGGCTGATA +
Preference number: 4 (lower is better)
Translates to: LSGSPLQKCYTHEPHVLQLRIPS*DAGWLI
Trigger: TATCAGCCAGCCAGCATCTCAAGATGGAATGCGTAG...TTGAAGAACATGTGGCTCATGAGTATAACACTTCTGTAGAGGACTCCCTGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp CCTAGTGTGCGAAACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTACTCTAAGGGTAATGGAGGTTaGAGCACAGGAACATTTGAC +
Preference number: 4 (lower is better)
Translates to: PSVRNDRATSSRTYENYSKGNGG*STGTFD
Trigger: GTCAAATGTTCCTGTGCTTCAACCTCCATTACCCTT...AGAGTAGTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp ACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCAACTGTGGTTTGTGCTaGAGGTTTCAAAGGGGTATC +
Preference number: 4 (lower is better)
Translates to: TTELPVLELMRTTLKSVANCGLC*RFQRGI
Trigger: GATACCCCTTTGAAACCTTCAGCACAAACCACAGTT...GGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp ACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTAAACCACTTAGACCTCGATGGTGGAATCAACTaGACTCTGGCTAGTTACAAC +
Preference number: 4 (lower is better)
Translates to: TTLKSVAIYQHEVNHLDLDGGIN*TLASYN
Trigger: GTTGTAACTAGCCAGAGTTCAGTTGATTCCACCATC...GAGGTCTAAGTGGTTTACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp CGACTAGAGAAAAGAGGCCAGAAAAAGCTTCAGACAATTCCAGTCAAGCAAGGTATGGTAGCTGACCTCTaGACCACTGCAGTGCTAATT +
Preference number: 4 (lower is better)
Translates to: RLEKRGQKKLQTIPVKQGMVADL*TTAVLI
Trigger: AATTAGCACTGCAGTGGTTCAGAGGTCAGCTACCAT...ACCTTGCTTGACTGGAATTGTCTGAAGCTTTTTCTGGCCTCTTTTCTCTAGTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp AACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTAAACCACTTAGACCTACCTGTAGCTATAGCTaGCTGGCTATAGAGAACTGG +
Preference number: 4 (lower is better)
Translates to: NYSKECGHLSARGKPLRPTCSYS*LAIENW
Trigger: CCAGTTCTCTATAGCCAGTCAGCTATAGCTACAGGT...AGGTCTAAGTGGTTTACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp CTGAATTGCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTTGTCAGGGAGTCTGAACTGGCTGCAATaGGGGAGCAGTCACTCCAAT +
Preference number: 4 (lower is better)
Translates to: LNCTCSGGEVNSSLLSGSLNWLQ*GSSHSN
Trigger: ATTGGAGTGACTGCTCCCTCATTGCAGCCAGTTCAG...ACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGCAATTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp TCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTTCGCTTCTGTGCAGTTaGTTCCCGATCCTCTTCACT +
Preference number: 4 (lower is better)
Translates to: SRTYENYSKECGHLSARGSLLCS*FPILFT
Trigger: AGTGAAGAGGATCGGGAATCAACTGCACAGAAGCGA...ACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp ACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTAAACCACTTAGACCTCTCAAAATCAAGGATATaGACACCTGCTGCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: TTLKSVAIYQHEVNHLDLSKSRI*TPAAAC
Trigger: ACAGGCAGCAGCAGGTGTTCATATCCTTGATTTTGA...GAGGTCTAAGTGGTTTACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp GCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTTGTCAGGGAGTCCTCTACATGACCCATTCCTGCTaGTGGAAGGCTAACTGGTAT +
Preference number: 4 (lower is better)
Translates to: ALVLEEKLILHFCQGVLYMTHSC*WKANWY
Trigger: ATACCAGTTAGCCTTCCAGCAGCAGGAATGGGTCAT...GTAGAGGACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp GTTCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGCCTTCTCTTCAGCCTTaGTCTCCAATCCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: VLELMRTTLKSVAIYQHEPSLQP*SPILRK
Trigger: CTTCCTGAGGATTGGAGAGCAAGGCTGAAGAGAAGG...CTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp CTGAATTGCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTTGTCAGGGAGTGCTGAGGAGCTGTTATaGCATCGATCTCCGCTAGGA +
Preference number: 4 (lower is better)
Translates to: LNCTCSGGEVNSSLLSGSAEELL*HRSPLG
Trigger: TCCTAGCGGAGATCGATGCCATAACAGCTCCTCAGC...ACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGCAATTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp ACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTAAACCACTTAGACCTCATCCCTGTACCTGTGTaGCAAGATATTGGGGTAACT +
Preference number: 4 (lower is better)
Translates to: TTLKSVAIYQHEVNHLDLIPVPV*QDIGVT
Trigger: AGTTACCCCAATATCTTGCCACACAGGTACAGGGAT...GAGGTCTAAGTGGTTTACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp TCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTCACCTGGCACAGAACTaGGCTGGTAATGCTGTAATC +
Preference number: 4 (lower is better)
Translates to: SRTYENYSKECGHLSARGHLAQN*AGNAVI
Trigger: GATTACAGCATTACCAGCCCAGTTCTGTGCCAGGTG...ACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp TCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTACTAGTTTCAGCACCTaGCACAGAACTGGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: SRTYENYSKECGHLSARGTSFST*HRTGLV
Trigger: TACCAGCCCAGTTCTGTGCCAGGTGCTGAAACTAGT...ACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp GGCCAGAAAAAGCTTCAGACAATTCCAGTCAAGCAAGGTAGAATGCAGAGCTGCTCACTTTCTCCAGATTaGACAACACTGCAAAGATCC +
Preference number: 4 (lower is better)
Translates to: GQKKLQTIPVKQGRMQSCSLSPD*TTLQRS
Trigger: GGATCTTTGCAGTGTTGTCCAATCTGGAGAAAGTGA...GCAGCTCTGCATTCTACCTTGCTTGACTGGAATTGTCTGAAGCTTTTTCTGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp ATGCCACCTAGTGTGCGAAACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTGCTGGAAGGCTAACTaGTATTGTCTGATGTCCAAT +
Preference number: 4 (lower is better)
Translates to: MPPSVRNDRATSSRTYENCWKAN*YCLMSN
Trigger: ATTGGACATCAGACAATACCAGTTAGCCTTCCAGCA...GTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGGTGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp AACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTAAACCACTTAGACCTACCCATTCCTGCTGCTaGAAGGCTAACTGGTATTGT +
Preference number: 4 (lower is better)
Translates to: NYSKECGHLSARGKPLRPTHSCC*KANWYC
Trigger: ACAATACCAGTTAGCCTTCCAGCAGCAGGAATGGGT...AGGTCTAAGTGGTTTACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp ATGCCACCTAGTGTGCGAAACGACCGAGCTACCAGTTCTAGAACTTATGAGAACAGCAGTCACTCCAATTaGGACAGAACATTCTGCATA +
Preference number: 4 (lower is better)
Translates to: MPPSVRNDRATSSRTYENSSHSN*DRTFCI
Trigger: TATGCAGAATGTTCTGTCCCAATTGGAGTGACTGCT...GTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGGTGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp GTTCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGTGTCTTTTCAGGTGGTaGCATTTTGGGAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: VLELMRTTLKSVAIYQHECLFRW*HFGSWW
Trigger: CCACCAGCTCCCAAAATGCCACCACCTGAAAAGACA...CTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp CTATCAGCACGAGGTAAACCACTTAGACCTCAGCACTTCAGGGGTGGCCGACTATACAAGGTCAGAAACTaGAGAAATACAAAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: LSARGKPLRPQHFRGGRLYKVRN*RNTKSF
Trigger: AAAGCTCTTTGTATTTCTCCAGTTTCTGACCTTGTA...TAGTCGGCCACCCCTGAAGTGCTGAGGTCTAAGTGGTTTACCTCGTGCTGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp GTTCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGCTTCTCGCTTGGCTATaGCTGGTCCACTTTTACTAC +
Preference number: 4 (lower is better)
Translates to: VLELMRTTLKSVAIYQHELLAWL*LVHFYY
Trigger: GTAGTAAAAGTGGACCAGTCATAGCCAAGCGAGAAG...CTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp GGCCAGAAAAAGCTTCAGACAATTCCAGTCAAGCAAGGTAGAATGCAGAGCTGCCTATTTGAGAGAGCCTaGATTCCTTCATTTACTTCC +
Preference number: 4 (lower is better)
Translates to: GQKKLQTIPVKQGRMQSCLFERA*IPSFTS
Trigger: GGAAGTAAATGAAGGAATTCAGGCTCTCTCAAATAG...GCAGCTCTGCATTCTACCTTGCTTGACTGGAATTGTCTGAAGCTTTTTCTGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp AAGTTTGCCAGTTTGAGAATAAAGGCAGCATGGTCAAAGCAATTCCAATCACCTCTACGCATTCCATCTTaGGATGCTGGCTGGCTGATA +
Preference number: 4 (lower is better)
Translates to: KFASLRIKAAWSKQFQSPLRIPS*DAGWLI
Trigger: TATCAGCCAGCCAGCATCTCAAGATGGAATGCGTAG...AGGTGATTGGAATTGCTTTGACCATGCTGCCTTTATTCTCAAACTGGCAAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp ACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCTGTAAGAGCAGCACATaGAAGTTGGAGATGGATTGT +
Preference number: 4 (lower is better)
Translates to: TTELPVLELMRTTLKSVACKSST*KLEMDC
Trigger: ACAATCCATCTCCAACTTTCATGTGCTGCTCTTACA...GGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp TTGTCAGGGAGTCCTCTACAGAAGTGTTATACTCATGAGCCACATGTTCTTCAAAAGCACAGGAACATTTaGCTGAAGGAGGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LSGSPLQKCYTHEPHVLQKHRNI*LKEGPE
Trigger: TTCTGGACCCTCCTTCAGTCAAATGTTCCTGTGCTT...TTGAAGAACATGTGGCTCATGAGTATAACACTTCTGTAGAGGACTCCCTGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp GCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTTGTCAGGGAGTCCTCTACAAGGGTAATGGAGGTTaGAGCACAGGAACATTTGAC +
Preference number: 4 (lower is better)
Translates to: ALVLEEKLILHFCQGVLYKGNGG*STGTFD
Trigger: GTCAAATGTTCCTGTGCTTCAACCTCCATTACCCTT...GTAGAGGACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp GCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTTGTCAGGGAGTCCTCTACGATGGTGGAATCAACTaGACTCTGGCTAGTTACAAC +
Preference number: 4 (lower is better)
Translates to: ALVLEEKLILHFCQGVLYDGGIN*TLASYN
Trigger: GTTGTAACTAGCCAGAGTTCAGTTGATTCCACCATC...GTAGAGGACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp CTTTTGTCAGGGAGTCCTCTACAGAAGTGTTATACTCATGAGCCACATGTTCTTATGGTAGCTGACCTCTaGACCACTGCAGTGCTAATT +
Preference number: 4 (lower is better)
Translates to: LLSGSPLQKCYTHEPHVLMVADL*TTAVLI
Trigger: AATTAGCACTGCAGTGGTTCAGAGGTCAGCTACCAT...AAGAACATGTGGCTCATGAGTATAACACTTCTGTAGAGGACTCCCTGACAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp TTGTCAGGGAGTCCTCTACAGAAGTGTTATACTCATGAGCCACATGTTCTTCAAAGAAAGGGTAGATGTTaGTGCTTCCTTTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LSGSPLQKCYTHEPHVLQRKGRC*CFLWLW
Trigger: CCAGAGCCAAAGGAAGCAGCAACATCTACCCTTTCT...TTGAAGAACATGTGGCTCATGAGTATAACACTTCTGTAGAGGACTCCCTGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp ATGCCACCTAGTGTGCGAAACGACCGAGCTACCAGTTCTAGAACTTATGAGAACACTTGTCAGGGTATTTaGCAGTTCTCCAATCTGAAA +
Preference number: 4 (lower is better)
Translates to: MPPSVRNDRATSSRTYENTCQGI*QFSNLK
Trigger: TTTCAGATTGGAGAACTGGCAAATACCCTGACAAGT...GTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGGTGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp GGCCAGAAAAAGCTTCAGACAATTCCAGTCAAGCAAGGTAGAATGCAGAGCTGCTGGGACAGAACATTCTaGATAACTCATAATTGCAGG +
Preference number: 4 (lower is better)
Translates to: GQKKLQTIPVKQGRMQSCWDRTF*ITHNCR
Trigger: CCTGCAATTATGAGTTATGCAGAATGTTCTGTCCCA...GCAGCTCTGCATTCTACCTTGCTTGACTGGAATTGTCTGAAGCTTTTTCTGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp ATGCCACCTAGTGTGCGAAACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTGGGACAGAACATTCTaGATAACTCATAATTGCAGG +
Preference number: 4 (lower is better)
Translates to: MPPSVRNDRATSSRTYENWDRTF*ITHNCR
Trigger: CCTGCAATTATGAGTTATGCAGAATGTTCTGTCCCA...GTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGGTGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp CGACTAGAGAAAAGAGGCCAGAAAAAGCTTCAGACAATTCCAGTCAAGCAAGGTATTAGCATTTCTCTCTaGCATGCCACTAACCAGCTG +
Preference number: 4 (lower is better)
Translates to: RLEKRGQKKLQTIPVKQGISISL*HATNQL
Trigger: CAGCTGGTTAGTGGCATGGCAGAGAGAAATGCTAAT...ACCTTGCTTGACTGGAATTGTCTGAAGCTTTTTCTGGCCTCTTTTCTCTAGTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp ATGCCACCTAGTGTGCGAAACGACCGAGCTACCAGTTCTAGAACTTATGAGAACAGTGAAAACTTTGTATaGATACACTCTTGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: MPPSVRNDRATSSRTYENSENFV*IHSCPG
Trigger: TCCTGGGCAAGAGTGTATGCATACAAAGTTTTCACT...GTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGGTGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp GCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTTGTCAGGGAGTCCTCTACTGCCAACCAGATGTTTaGGTGGAGTCTGTTCCATTT +
Preference number: 4 (lower is better)
Translates to: ALVLEEKLILHFCQGVLYCQPDV*VESVPF
Trigger: AAATGGAACAGACTCCACCCAAACATCTGGTTGGCA...GTAGAGGACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp ACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTAAACCACTTAGACCTCTCACTTTCTCCAGATTaGACAACACTGCAAAGATCC +
Preference number: 4 (lower is better)
Translates to: TTLKSVAIYQHEVNHLDLSLSPD*TTLQRS
Trigger: GGATCTTTGCAGTGTTGTCCAATCTGGAGAAAGTGA...GAGGTCTAAGTGGTTTACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp CTTTTGTCAGGGAGTCCTCTACAGAAGTGTTATACTCATGAGCCACATGTTCTTCTGGCTATAGAGAACTaGAGAACTGCCAATGGTAGC +
Preference number: 4 (lower is better)
Translates to: LLSGSPLQKCYTHEPHVLLAIEN*RTANGS
Trigger: GCTACCATTGGCAGTTCTCCAGTTCTCTATAGCCAG...AAGAACATGTGGCTCATGAGTATAACACTTCTGTAGAGGACTCCCTGACAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp GTTCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGCTGGCTATAGAGAACTaGAGAACTGCCAATGGTAGC +
Preference number: 4 (lower is better)
Translates to: VLELMRTTLKSVAIYQHELAIEN*RTANGS
Trigger: GCTACCATTGGCAGTTCTCCAGTTCTCTATAGCCAG...CTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp ATGCCACCTAGTGTGCGAAACGACCGAGCTACCAGTTCTAGAACTTATGAGAACACTATCAATATCAGTTaGCTGGTTTCCATTTGTCTC +
Preference number: 4 (lower is better)
Translates to: MPPSVRNDRATSSRTYENTINIS*LVSICL
Trigger: GAGACAAATGGAAACCAGTCAACTGATATTGATAGT...GTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGGTGGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp ACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTAAACCACTTAGACCTCGCCAGTTCTCCAATCTaGAATTTCAAATCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: TTLKSVAIYQHEVNHLDLASSPI*NFKSCS
Trigger: AGAACAGGATTTGAAATTTCAGATTGGAGAACTGGC...GAGGTCTAAGTGGTTTACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp CCTAGTGTGCGAAACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTACTCTGCCAGTTCTCCAATCTaGAATTTCAAATCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: PSVRNDRATSSRTYENYSASSPI*NFKSCS
Trigger: AGAACAGGATTTGAAATTTCAGATTGGAGAACTGGC...AGAGTAGTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp ACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTAAACCACTTAGACCTCTTACTGCCACATACTTaGGGGGAAATTCTCAAAATC +
Preference number: 4 (lower is better)
Translates to: TTLKSVAIYQHEVNHLDLLLPHT*GEILKI
Trigger: GATTTTGAGAATTTCCCCTCAAGTATGTGGCAGTAA...GAGGTCTAAGTGGTTTACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp CTGAATTGCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTTGTCAGGGAGTTCATCCCAGACTTCCTaGCAATCGCCCATCTCAATT +
Preference number: 4 (lower is better)
Translates to: LNCTCSGGEVNSSLLSGSSSQTS*QSPISI
Trigger: AATTGAGATGGGCGATTGGCAGGAAGTCTGGGATGA...ACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGCAATTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp GTTCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGCAGATTGGACAACACTaGAAAGATCCTCCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: VLELMRTTLKSVAIYQHEQIGQH*KDPPEK
Trigger: CTTCTCAGGAGGATCTTTGCAGTGTTGTCCAATCTG...CTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp CTTTTGTCAGGGAGTCCTCTACAGAAGTGTTATACTCATGAGCCACATGTTCTTCCACTAACCAGCTGCTaGTGTTTCCACTCTTCAATT +
Preference number: 4 (lower is better)
Translates to: LLSGSPLQKCYTHEPHVLPLTSC*CFHSSI
Trigger: AATTGAAGAGTGGAAACAGCAGCAGCTGGTTAGTGG...AAGAACATGTGGCTCATGAGTATAACACTTCTGTAGAGGACTCCCTGACAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp CTTTTGTCAGGGAGTCCTCTACAGAAGTGTTATACTCATGAGCCACATGTTCTTATTAGCATTTCTCTCTaGCATGCCACTAACCAGCTG +
Preference number: 4 (lower is better)
Translates to: LLSGSPLQKCYTHEPHVLISISL*HATNQL
Trigger: CAGCTGGTTAGTGGCATGGCAGAGAGAAATGCTAAT...AAGAACATGTGGCTCATGAGTATAACACTTCTGTAGAGGACTCCCTGACAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp TTGTCAGGGAGTCCTCTACAGAAGTGTTATACTCATGAGCCACATGTTCTTCAAGGTAGAATGCAGAGCTaGCTTCTGAATTGCACTTGT +
Preference number: 4 (lower is better)
Translates to: LSGSPLQKCYTHEPHVLQGRMQS*LLNCTC
Trigger: ACAAGTGCAATTCAGAAGGCAGCTCTGCATTCTACC...TTGAAGAACATGTGGCTCATGAGTATAACACTTCTGTAGAGGACTCCCTGACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp TCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTGGTAGAATGCAGAGCTaGCTTCTGAATTGCACTTGT +
Preference number: 4 (lower is better)
Translates to: SRTYENYSKECGHLSARGGRMQS*LLNCTC
Trigger: ACAAGTGCAATTCAGAAGGCAGCTCTGCATTCTACC...ACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp GCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTTGTCAGGGAGTCCTCTACGGTCATGACTGGTTTTaGAGGATTCTGAACAACTCT +
Preference number: 4 (lower is better)
Translates to: ALVLEEKLILHFCQGVLYGHDWF*RILNNS
Trigger: AGAGTTGTTCAGAATCCTCCAAAACCAGTCATGACC...GTAGAGGACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp CGACTAGAGAAAAGAGGCCAGAAAAAGCTTCAGACAATTCCAGTCAAGCAAGGTTCTAGTGGTCATGACTaGTTTTGGAGGATTCTGAAC +
Preference number: 4 (lower is better)
Translates to: RLEKRGQKKLQTIPVKQGSSGHD*FWRILN
Trigger: GTTCAGAATCCTCCAAAACCAGTCATGACCACTAGA...ACCTTGCTTGACTGGAATTGTCTGAAGCTTTTTCTGGCCTCTTTTCTCTAGTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp ACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCTCTCCGCTAGGAAGTTaGCCAATGTACTATCAATAT +
Preference number: 4 (lower is better)
Translates to: TTELPVLELMRTTLKSVASPLGS*PMYYQY
Trigger: ATATTGATAGTACATTGGCCAACTTCCTAGCGGAGA...GGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp CCTAGTGTGCGAAACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTACTCTTCTCCGCTAGGAAGTTaGCCAATGTACTATCAATAT +
Preference number: 4 (lower is better)
Translates to: PSVRNDRATSSRTYENYSSPLGS*PMYYQY
Trigger: ATATTGATAGTACATTGGCCAACTTCCTAGCGGAGA...AGAGTAGTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp TTAATACATAGAGTGTCTTGTTGTATTTACTGCCACATACTTGAGGGGAAATTCTGCTTCCTTTGGCTCTaGTCGAGGTGGAGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: LIHRVSCCIYCHILEGKFCFLWL*SRWSWR
Trigger: CCTCCAACTCCACCTCGACCAGAGCCAAAGGAAGCA...GAATTTCCCCTCAAGTATGTGGCAGTAAATACAACAAGACACTCTATGTATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp CTTTTGTCAGGGAGTCCTCTACAGAAGTGTTATACTCATGAGCCACATGTTCTTTGCCAACCAGATGTTTaGGTGGAGTCTGTTCCATTT +
Preference number: 4 (lower is better)
Translates to: LLSGSPLQKCYTHEPHVLCQPDV*VESVPF
Trigger: AAATGGAACAGACTCCACCCAAACATCTGGTTGGCA...AAGAACATGTGGCTCATGAGTATAACACTTCTGTAGAGGACTCCCTGACAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp CTTTTGTCAGGGAGTCCTCTACAGAAGTGTTATACTCATGAGCCACATGTTCTTTGTGTGGCAAGATATTaGGGTAACTCCCAAGTCACT +
Preference number: 4 (lower is better)
Translates to: LLSGSPLQKCYTHEPHVLCVARY*GNSQVT
Trigger: AGTGACTTGGGAGTTACCCCAATATCTTGCCACACA...AAGAACATGTGGCTCATGAGTATAACACTTCTGTAGAGGACTCCCTGACAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp GTTCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGATCCCTGTACCTGTGTaGCAAGATATTGGGGTAACT +
Preference number: 4 (lower is better)
Translates to: VLELMRTTLKSVAIYQHEIPVPV*QDIGVT
Trigger: AGTTACCCCAATATCTTGCCACACAGGTACAGGGAT...CTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp TTGTCAGGGAGTCCTCTACAGAAGTGTTATACTCATGAGCCACATGTTCTTCAATCGCTTGGCTATGACTaGTCCACTTTTACTACTGGA +
Preference number: 4 (lower is better)
Translates to: LSGSPLQKCYTHEPHVLQSLGYD*STFTTG
Trigger: TCCAGTAGTAAAAGTGGACCAGTCATAGCCAAGCGA...TTGAAGAACATGTGGCTCATGAGTATAACACTTCTGTAGAGGACTCCCTGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp TTGTCAGGGAGTCCTCTACAGAAGTGTTATACTCATGAGCCACATGTTCTTCAACCTACTGGTAGATTCTaGACTGGTAGCTCGAACAAA +
Preference number: 4 (lower is better)
Translates to: LSGSPLQKCYTHEPHVLQPTGRF*TGSSNK
Trigger: TTTGTTCGAGCTACCAGTCCAGAATCTACCAGTAGG...TTGAAGAACATGTGGCTCATGAGTATAACACTTCTGTAGAGGACTCCCTGACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp CCTAGTGTGCGAAACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTACTCTCTTTCAAGGTCTGTTTaGCAAGAGTCTCATCTCTAT +
Preference number: 4 (lower is better)
Translates to: PSVRNDRATSSRTYENYSLSRSV*QESHLY
Trigger: ATAGAGATGAGACTCTTGCCAAACAGACCTTGAAAG...AGAGTAGTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp TTAATACATAGAGTGTCTTGTTGTATTTACTGCCACATACTTGAGGGGAAATTCTTCTGGAGGTGGAGGTaGGGGTGGTGGCATTTCCAA +
Preference number: 4 (lower is better)
Translates to: LIHRVSCCIYCHILEGKFFWRWR*GWWHFQ
Trigger: TTGGAAATGCCACCACCCCCACCTCCACCTCCAGAA...GAATTTCCCCTCAAGTATGTGGCAGTAAATACAACAAGACACTCTATGTATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp GCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTTGTCAGGGAGTCCTCTACAGCAGTCACTCCAATTaGGACAGAACATTCTGCATA +
Preference number: 4 (lower is better)
Translates to: ALVLEEKLILHFCQGVLYSSHSN*DRTFCI
Trigger: TATGCAGAATGTTCTGTCCCAATTGGAGTGACTGCT...GTAGAGGACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp CGACTAGAGAAAAGAGGCCAGAAAAAGCTTCAGACAATTCCAGTCAAGCAAGGTCTATTTGAGAGAGCCTaGATTCCTTCATTTACTTCC +
Preference number: 4 (lower is better)
Translates to: RLEKRGQKKLQTIPVKQGLFERA*IPSFTS
Trigger: GGAAGTAAATGAAGGAATTCAGGCTCTCTCAAATAG...ACCTTGCTTGACTGGAATTGTCTGAAGCTTTTTCTGGCCTCTTTTCTCTAGTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp GTTCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGTGTAAGAGCAGCACATaGAAGTTGGAGATGGATTGT +
Preference number: 4 (lower is better)
Translates to: VLELMRTTLKSVAIYQHECKSST*KLEMDC
Trigger: ACAATCCATCTCCAACTTTCATGTGCTGCTCTTACA...CTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp CTGAATTGCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTTGTCAGGGAGTCTAACTGGTATTGTCTaGTGTCCAATTCCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: LNCTCSGGEVNSSLLSGSLTGIV*CPIPVA
Trigger: GGCAACAGGAATTGGACATCAGACAATACCAGTTAG...ACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGCAATTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp CGACTAGAGAAAAGAGGCCAGAAAAAGCTTCAGACAATTCCAGTCAAGCAAGGTTTACTGCCACATACTTaGGGGGAAATTCTCAAAATC +
Preference number: 4 (lower is better)
Translates to: RLEKRGQKKLQTIPVKQGLLPHT*GEILKI
Trigger: GATTTTGAGAATTTCCCCTCAAGTATGTGGCAGTAA...ACCTTGCTTGACTGGAATTGTCTGAAGCTTTTTCTGGCCTCTTTTCTCTAGTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp AAGTTTGCCAGTTTGAGAATAAAGGCAGCATGGTCAAAGCAATTCCAATCACCTCAGATTGGACAACACTaGAAAGATCCTCCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: KFASLRIKAAWSKQFQSPQIGQH*KDPPEK
Trigger: CTTCTCAGGAGGATCTTTGCAGTGTTGTCCAATCTG...AGGTGATTGGAATTGCTTTGACCATGCTGCCTTTATTCTCAAACTGGCAAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp AAGTTTGCCAGTTTGAGAATAAAGGCAGCATGGTCAAAGCAATTCCAATCACCTCATTCCATCTTGAGATaGTGGCTGGCTGATATCAGA +
Preference number: 4 (lower is better)
Translates to: KFASLRIKAAWSKQFQSPHSILR*WLADIR
Trigger: TCTGATATCAGCCAGCCAGCATCTCAAGATGGAATG...AGGTGATTGGAATTGCTTTGACCATGCTGCCTTTATTCTCAAACTGGCAAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp AACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTAAACCACTTAGACCTGGTCTTACTCTTCTTTaGCTTGTCTTTCCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: NYSKECGHLSARGKPLRPGLTLL*LVFPSF
Trigger: AAAGGAAGGAAAGACAAGGCAAAGAAGAGTAAGACC...AGGTCTAAGTGGTTTACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp GCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTTGTCAGGGAGTCCTCTACAGTGAAAACTTTGTATaGATACACTCTTGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: ALVLEEKLILHFCQGVLYSENFV*IHSCPG
Trigger: TCCTGGGCAAGAGTGTATGCATACAAAGTTTTCACT...GTAGAGGACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp TCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTGGTCATGACTGGTTTTaGAGGATTCTGAACAACTCT +
Preference number: 4 (lower is better)
Translates to: SRTYENYSKECGHLSARGGHDWF*RILNNS
Trigger: AGAGTTGTTCAGAATCCTCCAAAACCAGTCATGACC...ACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp ACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCTTCCATTTGTCTCTTTaGATTGTGCTAGTTTTTCGG +
Preference number: 4 (lower is better)
Translates to: TTELPVLELMRTTLKSVAFHLSL*IVLVFR
Trigger: CCGAAAAACTAGCACAATCCAAAGAGACAAATGGAA...GGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp CTGAATTGCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTTGTCAGGGAGTTGTGTGGCAAGATATTaGGGTAACTCCCAAGTCACT +
Preference number: 4 (lower is better)
Translates to: LNCTCSGGEVNSSLLSGSCVARY*GNSQVT
Trigger: AGTGACTTGGGAGTTACCCCAATATCTTGCCACACA...ACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGCAATTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp CTGAATTGCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTTGTCAGGGAGTCCTACTGGTAGATTCTaGACTGGTAGCTCGAACAAA +
Preference number: 4 (lower is better)
Translates to: LNCTCSGGEVNSSLLSGSPTGRF*TGSSNK
Trigger: TTTGTTCGAGCTACCAGTCCAGAATCTACCAGTAGG...ACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGCAATTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp GTTCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGTGCTGGAAGGCTAACTaGTATTGTCTGATGTCCAAT +
Preference number: 4 (lower is better)
Translates to: VLELMRTTLKSVAIYQHECWKAN*YCLMSN
Trigger: ATTGGACATCAGACAATACCAGTTAGCCTTCCAGCA...CTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp CTGAATTGCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTTGTCAGGGAGTGGAGTCTGTTCCATTTaGAGTAGAAGAAGAAAGGGT +
Preference number: 4 (lower is better)
Translates to: LNCTCSGGEVNSSLLSGSGVCSI*SRRRKG
Trigger: ACCCTTTCTTCTTCTACTTCAAATGGAACAGACTCC...ACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGCAATTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp AACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTAAACCACTTAGACCTATTTTCAGCACCAATTaGAGTTTCTCCATTTTCTGG +
Preference number: 4 (lower is better)
Translates to: NYSKECGHLSARGKPLRPIFSTN*SFSIFW
Trigger: CCAGAAAATGGAGAAACTGCAATTGGTGCTGAAAAT...AGGTCTAAGTGGTTTACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp CCTAGTGTGCGAAACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTACTCTCAACATAATTTCCTGTaGCTTTACTATTGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: PSVRNDRATSSRTYENYSQHNFL*LYYCCC
Trigger: GCAACAACAATAGTAAAGCCACAGGAAATTATGTTG...AGAGTAGTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp GCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTTGTCAGGGAGTCCTCTACAGTTTCTCCATTTTCTaGAGTATCTCGTCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: ALVLEEKLILHFCQGVLYSFSIF*SISSSF
Trigger: AAAACTGGACGAGATACTCCAGAAAATGGAGAAACT...GTAGAGGACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp CGACTAGAGAAAAGAGGCCAGAAAAAGCTTCAGACAATTCCAGTCAAGCAAGGTAGTTTCTCCATTTTCTaGAGTATCTCGTCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: RLEKRGQKKLQTIPVKQGSFSIF*SISSSF
Trigger: AAAACTGGACGAGATACTCCAGAAAATGGAGAAACT...ACCTTGCTTGACTGGAATTGTCTGAAGCTTTTTCTGGCCTCTTTTCTCTAGTCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp TTGTCAGGGAGTCCTCTACAGAAGTGTTATACTCATGAGCCACATGTTCTTCAATACAAAGAGAACCTGTaGAAGTTTCAGAGGATTCTG +
Preference number: 4 (lower is better)
Translates to: LSGSPLQKCYTHEPHVLQYKENL*KFQRIL
Trigger: CAGAATCCTCTGAAACTTCCACAGGTTCTCTTTGTA...TTGAAGAACATGTGGCTCATGAGTATAACACTTCTGTAGAGGACTCCCTGACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp TCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTGAATCAACTGAACTCTaGCTAGTTACAACTGTGGTT +
Preference number: 4 (lower is better)
Translates to: SRTYENYSKECGHLSARGESTEL*LVTTVV
Trigger: AACCACAGTTGTAACTAGCCAGAGTTCAGTTGATTC...ACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp TTAATACATAGAGTGTCTTGTTGTATTTACTGCCACATACTTGAGGGGAAATTCTCCGACTCCTGCCAGTaGACACTGAGTATCATATTG +
Preference number: 4 (lower is better)
Translates to: LIHRVSCCIYCHILEGKFSDSCQ*TLSIIL
Trigger: CAATATGATACTCAGTGTTCACTGGCAGGAGTCGGA...GAATTTCCCCTCAAGTATGTGGCAGTAAATACAACAAGACACTCTATGTATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp TTAATACATAGAGTGTCTTGTTGTATTTACTGCCACATACTTGAGGGGAAATTCAAGCACAGGAACATTTaGCTGAAGGAGGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LIHRVSCCIYCHILEGKFKHRNI*LKEGPE
Trigger: TTCTGGACCCTCCTTCAGTCAAATGTTCCTGTGCTT...GAATTTCCCCTCAAGTATGTGGCAGTAAATACAACAAGACACTCTATGTATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp CTGAATTGCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTTGTCAGGGAGTACTTGTCAGGGTATTTaGCAGTTCTCCAATCTGAAA +
Preference number: 4 (lower is better)
Translates to: LNCTCSGGEVNSSLLSGSTCQGI*QFSNLK
Trigger: TTTCAGATTGGAGAACTGGCAAATACCCTGACAAGT...ACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGCAATTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp TCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTTTCCATTTGTCTCTTTaGATTGTGCTAGTTTTTCGG +
Preference number: 4 (lower is better)
Translates to: SRTYENYSKECGHLSARGFHLSL*IVLVFR
Trigger: CCGAAAAACTAGCACAATCCAAAGAGACAAATGGAA...ACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp TTAATACATAGAGTGTCTTGTTGTATTTACTGCCACATACTTGAGGGGAAATTCTTCCTCTTCACCATCTaGAAACTCCCACTGAGACTC +
Preference number: 4 (lower is better)
Translates to: LIHRVSCCIYCHILEGKFFLFTI*KLPLRL
Trigger: GAGTCTCAGTGGGAGTTTCCAGATGGTGAAGAGGAA...GAATTTCCCCTCAAGTATGTGGCAGTAAATACAACAAGACACTCTATGTATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp AAGTTTGCCAGTTTGAGAATAAAGGCAGCATGGTCAAAGCAATTCCAATCACCTCTTTCAAGGTCTGTTTaGCAAGAGTCTCATCTCTAT +
Preference number: 4 (lower is better)
Translates to: KFASLRIKAAWSKQFQSPLSRSV*QESHLY
Trigger: ATAGAGATGAGACTCTTGCCAAACAGACCTTGAAAG...AGGTGATTGGAATTGCTTTGACCATGCTGCCTTTATTCTCAAACTGGCAAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp AAGTTTGCCAGTTTGAGAATAAAGGCAGCATGGTCAAAGCAATTCCAATCACCTTACAAAGAGAACCTGTaGAAGTTTCAGAGGATTCTG +
Preference number: 4 (lower is better)
Translates to: KFASLRIKAAWSKQFQSPYKENL*KFQRIL
Trigger: CAGAATCCTCTGAAACTTCCACAGGTTCTCTTTGTA...AGGTGATTGGAATTGCTTTGACCATGCTGCCTTTATTCTCAAACTGGCAAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
3UTR CAA 72 bp TGCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTaGTCAGGGAGTCCTCTACAGAAGTGTTATACTCAT +
Preference number: 4 (lower is better)
Translates to: CTCSGGEVNSSL*SGSPLQKCYTH
Trigger: ATGAGTATAACACTTCTGTAGAGGACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR TCA 90 bp AAGTTTGCCAGTTTGAGAATAAAGGCAGCATGGTCAAAGCAATTCCAATCACCTACTATCAATATCAGTTaGCTGGTTTCCATTTGTCTC +
Preference number: 4 (lower is better)
Translates to: KFASLRIKAAWSKQFQSPTINIS*LVSICL
Trigger: GAGACAAATGGAAACCAGTCAACTGATATTGATAGT...AGGTGATTGGAATTGCTTTGACCATGCTGCCTTTATTCTCAAACTGGCAAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp TCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTTCAATATCAGTTGACTaGTTTCCATTTGTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: SRTYENYSKECGHLSARGSISVD*FPFVSL
Trigger: CAAAGAGACAAATGGAAACCAGTCAACTGATATTGA...ACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp CTTTTGTCAGGGAGTCCTCTACAGAAGTGTTATACTCATGAGCCACATGTTCTTTACAAGGTCAGAAACTaGAGAAATACAAAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: LLSGSPLQKCYTHEPHVLYKVRN*RNTKSF
Trigger: AAAGCTCTTTGTATTTCTCCAGTTTCTGACCTTGTA...AAGAACATGTGGCTCATGAGTATAACACTTCTGTAGAGGACTCCCTGACAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp TTAATACATAGAGTGTCTTGTTGTATTTACTGCCACATACTTGAGGGGAAATTCTCTAGTGGTCATGACTaGTTTTGGAGGATTCTGAAC +
Preference number: 4 (lower is better)
Translates to: LIHRVSCCIYCHILEGKFSSGHD*FWRILN
Trigger: GTTCAGAATCCTCCAAAACCAGTCATGACCACTAGA...GAATTTCCCCTCAAGTATGTGGCAGTAAATACAACAAGACACTCTATGTATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp TTAATACATAGAGTGTCTTGTTGTATTTACTGCCACATACTTGAGGGGAAATTCGAATCAACTGAACTCTaGCTAGTTACAACTGTGGTT +
Preference number: 4 (lower is better)
Translates to: LIHRVSCCIYCHILEGKFESTEL*LVTTVV
Trigger: AACCACAGTTGTAACTAGCCAGAGTTCAGTTGATTC...GAATTTCCCCTCAAGTATGTGGCAGTAAATACAACAAGACACTCTATGTATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR GCA 90 bp TTAATACATAGAGTGTCTTGTTGTATTTACTGCCACATACTTGAGGGGAAATTCATTTTCAGCACCAATTaGAGTTTCTCCATTTTCTGG +
Preference number: 4 (lower is better)
Translates to: LIHRVSCCIYCHILEGKFIFSTN*SFSIFW
Trigger: CCAGAAAATGGAGAAACTGCAATTGGTGCTGAAAAT...GAATTTCCCCTCAAGTATGTGGCAGTAAATACAACAAGACACTCTATGTATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp TTAATACATAGAGTGTCTTGTTGTATTTACTGCCACATACTTGAGGGGAAATTCTCAATATCAGTTGACTaGTTTCCATTTGTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: LIHRVSCCIYCHILEGKFSISVD*FPFVSL
Trigger: CAAAGAGACAAATGGAAACCAGTCAACTGATATTGA...GAATTTCCCCTCAAGTATGTGGCAGTAAATACAACAAGACACTCTATGTATTAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CCA 90 bp TTAATACATAGAGTGTCTTGTTGTATTTACTGCCACATACTTGAGGGGAAATTCCAACATAATTTCCTGTaGCTTTACTATTGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: LIHRVSCCIYCHILEGKFQHNFL*LYYCCC
Trigger: GCAACAACAATAGTAAAGCCACAGGAAATTATGTTG...GAATTTCCCCTCAAGTATGTGGCAGTAAATACAACAAGACACTCTATGTATTAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS GCA 90 bp GGGTCCCGGCCCGGCGTGCTGCCCCGAGGACCCGGCGGAGAGAGTTaGAGGATGGGCCTACGGCCGGGTACCGCCCGGGACTTCTTCCCC +
Preference number: 5 (lower is better)
Translates to: GSRPGVLPRGPGGES*RMGLRPGTARDFFP
Trigger: GGGGAAGAAGTCCCGGGCGGTACCCGGCCGTAGGCCCATCCTGCAACTCTCTCCGCCGGGTCCTCGGGGCAGCACGCCGGGCCGGGACCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000263773.10
ENST00000534003.5
ENST00000540172.2
ENST00000542975.1
ENST00000642545.1
ENST00000645979.1
ENST00000646180.2
ENST00000646517.1
CDS GCA 90 bp CCGGCTCAGTGTCGGGTTCCGGCTCCGGGTCCCGGCCCGGCGTGCTaGCCCGAGGACCCGGCGGAGAGAGTTGCAGGATGGGCCTACGGC +
Preference number: 5 (lower is better)
Translates to: PAQCRVPAPGPGPAC*PEDPAERVAGWAYG
Trigger: GCCGTAGGCCCATCCTGCAACTCTCTCCGCCGGGTCCTCGGGGCAGCACGCCGGGCCGGGACCCGGAGCCGGAACCCGACACTGAGCCGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263773.10
ENST00000534003.5
ENST00000540172.2
ENST00000542975.1
ENST00000642545.1
ENST00000645979.1
ENST00000646180.2
ENST00000646517.1
CDS CCA 90 bp TCACCGCGGTGGTGGTGGTCGTCGCCGCCGACGGGGCGGGCTGGCTaGGGACCGCCGCGGTTGAGTCCGGCTCAGTGTCGGGTTCCGGCT +
Preference number: 5 (lower is better)
Translates to: SPRWWWSSPPTGRAG*GPPRLSPAQCRVPA
Trigger: AGCCGGAACCCGACACTGAGCCGGACTCAACCGCGGCGGTCCCCAGCCAGCCCGCCCCGTCGGCGGCGACGACCACCACCACCGCGGTGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000263773.10
ENST00000534003.5
ENST00000540172.2
ENST00000542975.1
ENST00000642545.1
ENST00000645979.1
ENST00000646180.2
ENST00000646517.1
CDS CCA 90 bp GCAGTCACCGCGGTGGTGGTGGTCGTCGCCGCCGACGGGGCGGGCTaGCTGGGGACCGCCGCGGTTGAGTCCGGCTCAGTGTCGGGTTCC +
Preference number: 5 (lower is better)
Translates to: AVTAVVVVVAADGAG*LGTAAVESGSVSGS
Trigger: GGAACCCGACACTGAGCCGGACTCAACCGCGGCGGTCCCCAGCCAGCCCGCCCCGTCGGCGGCGACGACCACCACCACCGCGGTGACTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000263773.10
ENST00000534003.5
ENST00000540172.2
ENST00000542975.1
ENST00000642545.1
ENST00000645979.1
ENST00000646180.2
ENST00000646517.1
CDS CCA 90 bp GGCCCGGCGTGCTGCCCCGAGGACCCGGCGGAGAGAGTTGCAGGATaGGCCTACGGCCGGGTACCGCCCGGGACTTCTTCCCCATCGCGA +
Preference number: 5 (lower is better)
Translates to: GPACCPEDPAERVAG*AYGRVPPGTSSPSR
Trigger: TCGCGATGGGGAAGAAGTCCCGGGCGGTACCCGGCCGTAGGCCCATCCTGCAACTCTCTCCGCCGGGTCCTCGGGGCAGCACGCCGGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263773.10
ENST00000540172.2
ENST00000542975.1
ENST00000642545.1
ENST00000646180.2
ENST00000646517.1
CDS CCA 90 bp AGAGCGTCGGGCGGCCGAGAGGGGCGGGCACTGGAGGCTGGGCGCTaGGCCCTGGGCGCTGCGACGCGTAATCAATATTCATACACCGTG +
Preference number: 5 (lower is better)
Translates to: RASGGREGRALEAGR*ALGAATRNQYSYTV
Trigger: CACGGTGTATGAATATTGATTACGCGTCGCAGCGCCCAGGGCCCAGCGCCCAGCCTCCAGTGCCCGCCCCTCTCGGCCGCCCGACGCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000540172.2
ENST00000542975.1
ENST00000642545.1
ENST00000646517.1
CDS TCA 90 bp GCTGGGCCCTGGGCGCTGCGACGCGTAATCAATATTCATACACCGTaGCACCGCCTCCAGCCCGGATCCGCTTTCAACCAGCGGAGCACG +
Preference number: 5 (lower is better)
Translates to: AGPWALRRVINIHTP*HRLQPGSAFNQRST
Trigger: CGTGCTCCGCTGGTTGAAAGCGGATCCGGGCTGGAGGCGGTGTCACGGTGTATGAATATTGATTACGCGTCGCAGCGCCCAGGGCCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542975.1
ENST00000646517.1
CDS CCA 90 bp GGGAGCTGGTGGTGGTGGAGGAGGAGGAGGAGGAGGTGGTGGTGGTaGTTCTATAATGGTAGCGGTAGGCACAGCACCTCGGGCCTGAAC +
Preference number: 5 (lower is better)
Translates to: GSWWWWRRRRRRWWW*FYNGSGRHSTSGLN
Trigger: GTTCAGGCCCGAGGTGCTGTGCCTACCGCTACCATTATAGAACCACCACCACCACCTCCTCCTCCTCCTCCTCCACCACCACCAGCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263773.10
ENST00000530207.1
ENST00000532646.6
ENST00000643840.1
ENST00000646180.2
ENST00000646200.1
CDS GCA 90 bp CTCCAATGTGTGGCTGGCCAAACTTTGTGCTTGCGGTGCTTTGCCTaGCCAGCACCGCTAACTGCAGCTGCTCTCAGTCTCCAGACAGGC +
Preference number: 5 (lower is better)
Translates to: LQCVAGQTLCLRCFA*PAPLTAAALSLQTG
Trigger: GCCTGTCTGGAGACTGAGAGCAGCTGCAGTTAGCGGTGCTGGGCAGGCAAAGCACCGCAAGCACAAAGTTTGGCCAGCCACACATTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534003.5
ENST00000645979.1
CDS GCA 90 bp CCAAACTTTGTGCTTGCGGTGCTTTGCCTGCCCAGCACCGCTAACTaGAGCTGCTCTCAGTCTCCAGACAGGCTGTCATGTCGTCAGATG +
Preference number: 5 (lower is better)
Translates to: PNFVLAVLCLPSTAN*SCSQSPDRLSCRQM
Trigger: CATCTGACGACATGACAGCCTGTCTGGAGACTGAGAGCAGCTGCAGTTAGCGGTGCTGGGCAGGCAAAGCACCGCAAGCACAAAGTTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534003.5
ENST00000645979.1
CDS GCA 90 bp GTTTCTCCAATGTGTGGCTGGCCAAACTTTGTGCTTGCGGTGCTTTaGCTGCCCAGCACCGCTAACTGCAGCTGCTCTCAGTCTCCAGAC +
Preference number: 5 (lower is better)
Translates to: VSPMCGWPNFVLAVL*LPSTANCSCSQSPD
Trigger: GTCTGGAGACTGAGAGCAGCTGCAGTTAGCGGTGCTGGGCAGGCAAAGCACCGCAAGCACAAAGTTTGGCCAGCCACACATTGGAGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534003.5
ENST00000645979.1
CDS TCA 90 bp GGTGGTGGTTCTATAATGGTAGCGGTAGGCACAGCACCTCGGGCCTaGACTGGCTGCAATGAGGGAGCAGTCACTCCAATTGGGACAGAA +
Preference number: 5 (lower is better)
Translates to: GGGSIMVAVGTAPRA*TGCNEGAVTPIGTE
Trigger: TTCTGTCCCAATTGGAGTGACTGCTCCCTCATTGCAGCCAGTTCAGGCCCGAGGTGCTGTGCCTACCGCTACCATTATAGAACCACCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263773.10
ENST00000530207.1
ENST00000532646.6
ENST00000643840.1
ENST00000646180.2
ENST00000646200.1
CDS GCA 90 bp ACAGAGCTCTCGCATGCGCTTAACCCCCAAGCCCGCCCTACTCCGTaGAACACTCTGGAGAGTAAAAACCAGCTTTGTCCATATCTTGGG +
Preference number: 5 (lower is better)
Translates to: TELSHALNPQARPTP*NTLESKNQLCPYLG
Trigger: CCCAAGATATGGACAAAGCTGGTTTTTACTCTCCAGAGTGTTGCACGGAGTAGGGCGGGCTTGGGGGTTAAGCGCATGCGAGAGCTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000524696.1
ENST00000534003.5
ENST00000643282.1
ENST00000645979.1
CDS GCA 90 bp CTTTTGTTTCTCCAATGTGTGGCTGGCCAAACTTTGTGCTTGCGGTaGTTTGCCTGCCCAGCACCGCTAACTGCAGCTGCTCTCAGTCTC +
Preference number: 5 (lower is better)
Translates to: LLFLQCVAGQTLCLR*FACPAPLTAAALSL
Trigger: GAGACTGAGAGCAGCTGCAGTTAGCGGTGCTGGGCAGGCAAAGCACCGCAAGCACAAAGTTTGGCCAGCCACACATTGGAGAAACAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534003.5
ENST00000645979.1
CDS-3UTR CAA 90 bp GCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTTGTCAGGGAGTCCTCTACACCCGGCGGAGAGAGTaGCAGGATGGGCCTACGGCC +
Preference number: 5 (lower is better)
Translates to: ALVLEEKLILHFCQGVLYTRRRE*QDGPTA
Trigger: GGCCGTAGGCCCATCCTGCAACTCTCTCCGCCGGGT...GTAGAGGACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp CTTTTGTCAGGGAGTCCTCTACAGAAGTGTTATACTCATGAGCCACATGTTCTTTGGGGACCGCCGCGGTaGAGTCCGGCTCAGTGTCGG +
Preference number: 5 (lower is better)
Translates to: LLSGSPLQKCYTHEPHVLWGPPR*SPAQCR
Trigger: CCGACACTGAGCCGGACTCAACCGCGGCGGTCCCCA...AAGAACATGTGGCTCATGAGTATAACACTTCTGTAGAGGACTCCCTGACAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp TTGTCAGGGAGTCCTCTACAGAAGTGTTATACTCATGAGCCACATGTTCTTCAATGGGGACCGCCGCGGTaGAGTCCGGCTCAGTGTCGG +
Preference number: 5 (lower is better)
Translates to: LSGSPLQKCYTHEPHVLQWGPPR*SPAQCR
Trigger: CCGACACTGAGCCGGACTCAACCGCGGCGGTCCCCA...TTGAAGAACATGTGGCTCATGAGTATAACACTTCTGTAGAGGACTCCCTGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS TCA 90 bp AATGGTAGCGGTAGGCACAGCACCTCGGGCCTGAACTGGCTGCAATaGGGGAGCAGTCACTCCAATTGGGACAGAACATTCTGCATAACT +
Preference number: 5 (lower is better)
Translates to: NGSGRHSTSGLNWLQ*GSSHSNWDRTFCIT
Trigger: AGTTATGCAGAATGTTCTGTCCCAATTGGAGTGACTGCTCCCTCATTGCAGCCAGTTCAGGCCCGAGGTGCTGTGCCTACCGCTACCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263773.10
ENST00000530207.1
ENST00000532646.6
ENST00000643840.1
ENST00000646180.2
ENST00000646200.1
CDS-3UTR CAA 90 bp AAGTTTGCCAGTTTGAGAATAAAGGCAGCATGGTCAAAGCAATTCCAATCACCTACCCGGCGGAGAGAGTaGCAGGATGGGCCTACGGCC +
Preference number: 5 (lower is better)
Translates to: KFASLRIKAAWSKQFQSPTRRRE*QDGPTA
Trigger: GGCCGTAGGCCCATCCTGCAACTCTCTCCGCCGGGT...AGGTGATTGGAATTGCTTTGACCATGCTGCCTTTATTCTCAAACTGGCAAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS TCA 90 bp ATCTTGAGATGCTGGCTGGCTGATATCAGAACGTGGACTAGACCCTaGCACACTACCATCTCCTTCCTCCAAGGCTCGCAACTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: ILRCWLADIRTWTRP*HTTISFLQGSQLCF
Trigger: AAAGCAGAGTTGCGAGCCTTGGAGGAAGGAGATGGTAGTGTGTCAGGGTCTAGTCCACGTTCTGATATCAGCCAGCCAGCATCTCAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263773.10
ENST00000534003.5
ENST00000544590.1
ENST00000645979.1
ENST00000646180.2
ENST00000646586.1
CDS GCA 90 bp TGCTGCTGGAAGGCTAACTGGTATTGTCTGATGTCCAATTCCTGTTaGCTGGTTTCCAATCCCTGCTGCCTGGTGACCTGTAGCTATAGC +
Preference number: 5 (lower is better)
Translates to: CCWKANWYCLMSNSC*LVSNPCCLVTCSYS
Trigger: GCTATAGCTACAGGTCACCAGGCAGCAGGGATTGGAAACCAGGCAACAGGAATTGGACATCAGACAATACCAGTTAGCCTTCCAGCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263773.10
ENST00000530207.1
ENST00000532646.6
ENST00000643840.1
ENST00000646180.2
ENST00000646200.1
CDS GCA 90 bp GCCACGAAGTTTTCCTTAACTTCACCGAGGTTAATCAGGAGTAGTTaGTTCCAGAGGTCCTGTAAAGCGCACAGAGCTCTCGCATGCGCT +
Preference number: 5 (lower is better)
Translates to: ATKFSLTSPRLIRSS*FQRSCKAHRALACA
Trigger: AGCGCATGCGAGAGCTCTGTGCGCTTTACAGGACCTCTGGAAGCAACTACTCCTGATTAACCTCGGTGAAGTTAAGGAAAACTTCGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000524696.1
ENST00000531394.1
ENST00000534003.5
ENST00000643282.1
ENST00000645151.1
ENST00000645979.1
CDS CCA 90 bp GCCTGTTGCTTTAACAGCTGTGGGTCTAGTGGTCATGACTGGTTTTaGAGGATTCTGAACAACTCTAGGAACCTCCTGCACCGCTTCCTG +
Preference number: 5 (lower is better)
Translates to: ACCFNSCGSSGHDWF*RILNNSRNLLHRFL
Trigger: CAGGAAGCGGTGCAGGAGGTTCCTAGAGTTGTTCAGAATCCTCCAAAACCAGTCATGACCACTAGACCCACAGCTGTTAAAGCAACAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263773.10
ENST00000534003.5
ENST00000645979.1
ENST00000646180.2
CDS CCA 90 bp CATTCCTCTGGCCTGATGACCCATTCCTGCTGCTGGAAGGCTAACTaGTATTGTCTGATGTCCAATTCCTGTTGCCTGGTTTCCAATCCC +
Preference number: 5 (lower is better)
Translates to: HSSGLMTHSCCWKAN*YCLMSNSCCLVSNP
Trigger: GGGATTGGAAACCAGGCAACAGGAATTGGACATCAGACAATACCAGTTAGCCTTCCAGCAGCAGGAATGGGTCATCAGGCCAGAGGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263773.10
ENST00000530207.1
ENST00000532646.6
ENST00000643840.1
ENST00000646180.2
ENST00000646200.1
CDS-3UTR CAA 90 bp GGCCAGAAAAAGCTTCAGACAATTCCAGTCAAGCAAGGTAGAATGCAGAGCTGCATGTTGCTGCTTCCTTaGGCTCTGGTCGAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: GQKKLQTIPVKQGRMQSCMLLLP*ALVEVE
Trigger: CTCCACCTCGACCAGAGCCAAAGGAAGCAGCAACAT...GCAGCTCTGCATTCTACCTTGCTTGACTGGAATTGTCTGAAGCTTTTTCTGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp CTATCAGCACGAGGTAAACCACTTAGACCTCAGCACTTCAGGGGTGGCCGACTACAGTTCAAGGGTATCTaGTTCCTCTTCCTCCTCACT +
Preference number: 5 (lower is better)
Translates to: LSARGKPLRPQHFRGGRLQFKGI*FLFLLT
Trigger: AGTGAGGAGGAAGAGGAACAAGATACCCTTGAACTG...TAGTCGGCCACCCCTGAAGTGCTGAGGTCTAAGTGGTTTACCTCGTGCTGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp ACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTAAACCACTTAGACCTCTCAGGTGGTGGCATTTaGGGAGCTGGTGGTGGTGGA +
Preference number: 5 (lower is better)
Translates to: TTLKSVAIYQHEVNHLDLSGGGI*GAGGGG
Trigger: TCCACCACCACCAGCTCCCAAAATGCCACCACCTGA...GAGGTCTAAGTGGTTTACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp ACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCTCAGGTGGTGGCATTTaGGGAGCTGGTGGTGGTGGA +
Preference number: 5 (lower is better)
Translates to: TTELPVLELMRTTLKSVASGGGI*GAGGGG
Trigger: TCCACCACCACCAGCTCCCAAAATGCCACCACCTGA...GGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS CCA 90 bp TCCTGTTGCTTTAACAGCTGTGGGTCTAGTGGTCATGACTGGTTTTaGAGGATTCTGAACAACTCTAGGAACCTCCTGCACCGCTTCCTG +
Preference number: 5 (lower is better)
Translates to: SCCFNSCGSSGHDWF*RILNNSRNLLHRFL
Trigger: CAGGAAGCGGTGCAGGAGGTTCCTAGAGTTGTTCAGAATCCTCCAAAACCAGTCATGACCACTAGACCCACAGCTGTTAAAGCAACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540172.2
ENST00000642545.1
CDS CCA 90 bp TCGATCTCCTGTTGCTTTAACAGCTGTGGGTCTAGTGGTCATGACTaGTTTTGGAGGATTCTGAACAACTCTAGGAACCTCCTGCACCGC +
Preference number: 5 (lower is better)
Translates to: SISCCFNSCGSSGHD*FWRILNNSRNLLHR
Trigger: GCGGTGCAGGAGGTTCCTAGAGTTGTTCAGAATCCTCCAAAACCAGTCATGACCACTAGACCCACAGCTGTTAAAGCAACAGGAGATCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540172.2
ENST00000642545.1
CDS TCA 90 bp TCGTCAGATGGTGGTGATCACAAATCATGTCTGAGATGTCAAAGGTaGAAGGTGAAAAGGGGAGAAGAGTGCGTACCTGTCCCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: SSDGGDHKSCLRCQR*KVKRGEECVPVPVA
Trigger: TGCCACTGGGACAGGTACGCACTCTTCTCCCCTTTTCACCTTTCACCTTTGACATCTCAGACATGATTTGTGATCACCACCATCTGACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534003.5
ENST00000645979.1
CDS CCA 90 bp ACATGGAACACTTTAAACATTGCTTTTGTTTCTCCAATGTGTGGCTaGCCAAACTTTGTGCTTGCGGTGCTTTGCCTGCCCAGCACCGCT +
Preference number: 5 (lower is better)
Translates to: TWNTLNIAFVSPMCG*PNFVLAVLCLPSTA
Trigger: AGCGGTGCTGGGCAGGCAAAGCACCGCAAGCACAAAGTTTGGCCAGCCACACATTGGAGAAACAAAAGCAATGTTTAAAGTGTTCCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534003.5
ENST00000645979.1
CDS-3UTR CAA 90 bp GGCCAGAAAAAGCTTCAGACAATTCCAGTCAAGCAAGGTAGAATGCAGAGCTGCTCCTTCTCTTCAGCCTaGCTCTCCAATCCTCAGGAA +
Preference number: 5 (lower is better)
Translates to: GQKKLQTIPVKQGRMQSCSFSSA*LSNPQE
Trigger: TTCCTGAGGATTGGAGAGCAAGGCTGAAGAGAAGGA...GCAGCTCTGCATTCTACCTTGCTTGACTGGAATTGTCTGAAGCTTTTTCTGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS TCA 90 bp TTAACAGCTGTGGGTCTAGTGGTCATGACTGGTTTTGGAGGATTCTaGACAACTCTAGGAACCTCCTGCACCGCTTCCTGTTCATCTTCT +
Preference number: 5 (lower is better)
Translates to: LTAVGLVVMTGFGGF*TTLGTSCTASCSSS
Trigger: AGAAGATGAACAGGAAGCGGTGCAGGAGGTTCCTAGAGTTGTTCAGAATCCTCCAAAACCAGTCATGACCACTAGACCCACAGCTGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263773.10
ENST00000534003.5
ENST00000540172.2
ENST00000642545.1
ENST00000645979.1
ENST00000646180.2
CDS TCA 90 bp GCTGCTCTCAGTCTCCAGACAGGCTGTCATGTCGTCAGATGGTGGTaGTCACAAATCATGTCTGAGATGTCAAAGGTGAAAGGTGAAAAG +
Preference number: 5 (lower is better)
Translates to: AALSLQTGCHVVRWW*SQIMSEMSKVKGEK
Trigger: CTTTTCACCTTTCACCTTTGACATCTCAGACATGATTTGTGATCACCACCATCTGACGACATGACAGCCTGTCTGGAGACTGAGAGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534003.5
ENST00000645979.1
CDS CCA 90 bp CTGGCACAGAACTGGGCTGGTAATGCTGTAATCCCTGTACCTGTGTaGCAAGATATTGGGGTAACTCCCAAGTCACTTCATTTGTTTGTG +
Preference number: 5 (lower is better)
Translates to: LAQNWAGNAVIPVPV*QDIGVTPKSLHLFV
Trigger: CACAAACAAATGAAGTGACTTGGGAGTTACCCCAATATCTTGCCACACAGGTACAGGGATTACAGCATTACCAGCCCAGTTCTGTGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263773.10
ENST00000534003.5
ENST00000645979.1
ENST00000646180.2
CDS CCA 90 bp CGTTACATGGAACACTTTAAACATTGCTTTTGTTTCTCCAATGTGTaGCTGGCCAAACTTTGTGCTTGCGGTGCTTTGCCTGCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: RYMEHFKHCFCFSNV*LAKLCACGALPAQH
Trigger: GTGCTGGGCAGGCAAAGCACCGCAAGCACAAAGTTTGGCCAGCCACACATTGGAGAAACAAAAGCAATGTTTAAAGTGTTCCATGTAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534003.5
ENST00000645979.1
CDS-3UTR CAA 90 bp CTATCAGCACGAGGTAAACCACTTAGACCTCAGCACTTCAGGGGTGGCCGACTATTGACTGGTTTCCATTaGTCTCTTTGGATTGTGCTA +
Preference number: 5 (lower is better)
Translates to: LSARGKPLRPQHFRGGRLLTGFH*SLWIVL
Trigger: TAGCACAATCCAAAGAGACAAATGGAAACCAGTCAA...TAGTCGGCCACCCCTGAAGTGCTGAGGTCTAAGTGGTTTACCTCGTGCTGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp GGCCAGAAAAAGCTTCAGACAATTCCAGTCAAGCAAGGTAGAATGCAGAGCTGCTTGCCAACCAGATGTTaGGGTGGAGTCTGTTCCATT +
Preference number: 5 (lower is better)
Translates to: GQKKLQTIPVKQGRMQSCLPTRC*GGVCSI
Trigger: AATGGAACAGACTCCACCCAAACATCTGGTTGGCAA...GCAGCTCTGCATTCTACCTTGCTTGACTGGAATTGTCTGAAGCTTTTTCTGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp AACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTAAACCACTTAGACCTCCTACGCATTCCATCTaGAGATGCTGGCTGGCTGAT +
Preference number: 5 (lower is better)
Translates to: NYSKECGHLSARGKPLRPPTHSI*RCWLAD
Trigger: ATCAGCCAGCCAGCATCTCAAGATGGAATGCGTAGG...AGGTCTAAGTGGTTTACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp GGCCAGAAAAAGCTTCAGACAATTCCAGTCAAGCAAGGTAGAATGCAGAGCTGCCTAGTCCAAGGTAATTaGACTGCAGGCTCATTCCTC +
Preference number: 5 (lower is better)
Translates to: GQKKLQTIPVKQGRMQSCLVQGN*TAGSFL
Trigger: GAGGAATGAGCCTGCAGTCAAATTACCTTGGACTAG...GCAGCTCTGCATTCTACCTTGCTTGACTGGAATTGTCTGAAGCTTTTTCTGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS TCA 90 bp AACCAGCTGCTGCTGTTTCCACTCTTCAATTCGCTTCTGTGCAGTTaGTTCCCGATCCTCTTCACTGGAACTAGAATTGTCCTCTTCATC +
Preference number: 5 (lower is better)
Translates to: NQLLLFPLFNSLLCS*FPILFTGTRIVLFI
Trigger: GATGAAGAGGACAATTCTAGTTCCAGTGAAGAGGATCGGGAATCAACTGCACAGAAGCGAATTGAAGAGTGGAAACAGCAGCAGCTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263773.10
ENST00000526109.6
ENST00000642489.1
ENST00000646180.2
CDS-3UTR CAA 90 bp ACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCCAGTTCAAGGGTATCTaGTTCCTCTTCCTCCTCACT +
Preference number: 5 (lower is better)
Translates to: TTELPVLELMRTTLKSVAQFKGI*FLFLLT
Trigger: AGTGAGGAGGAAGAGGAACAAGATACCCTTGAACTG...GGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp ATGCCACCTAGTGTGCGAAACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTTTTTAACTTCTCGCTaGGCTATGACTGGTCCACTT +
Preference number: 5 (lower is better)
Translates to: MPPSVRNDRATSSRTYENFLTSR*AMTGPL
Trigger: AAGTGGACCAGTCATAGCCAAGCGAGAAGTTAAAAA...GTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGGTGGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp CTGAATTGCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTTGTCAGGGAGTCCTACGCATTCCATCTaGAGATGCTGGCTGGCTGAT +
Preference number: 5 (lower is better)
Translates to: LNCTCSGGEVNSSLLSGSPTHSI*RCWLAD
Trigger: ATCAGCCAGCCAGCATCTCAAGATGGAATGCGTAGG...ACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGCAATTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp ATGCCACCTAGTGTGCGAAACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTACTTGTCAGGGTATTaGCCAGTTCTCCAATCTGAA +
Preference number: 5 (lower is better)
Translates to: MPPSVRNDRATSSRTYENYLSGY*PVLQSE
Trigger: TTCAGATTGGAGAACTGGCAAATACCCTGACAAGTA...GTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGGTGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp AACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTAAACCACTTAGACCTCTAGTCCAAGGTAATTaGACTGCAGGCTCATTCCTC +
Preference number: 5 (lower is better)
Translates to: NYSKECGHLSARGKPLRPLVQGN*TAGSFL
Trigger: GAGGAATGAGCCTGCAGTCAAATTACCTTGGACTAG...AGGTCTAAGTGGTTTACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp TTGTCAGGGAGTCCTCTACAGAAGTGTTATACTCATGAGCCACATGTTCTTCAATCCTTCTCTTCAGCCTaGCTCTCCAATCCTCAGGAA +
Preference number: 5 (lower is better)
Translates to: LSGSPLQKCYTHEPHVLQSFSSA*LSNPQE
Trigger: TTCCTGAGGATTGGAGAGCAAGGCTGAAGAGAAGGA...TTGAAGAACATGTGGCTCATGAGTATAACACTTCTGTAGAGGACTCCCTGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp CCTAGTGTGCGAAACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTACTCTGCTAAGTTTGCCAGTTaGAGAATAAAGGCAGCATGG +
Preference number: 5 (lower is better)
Translates to: PSVRNDRATSSRTYENYSAKFAS*RIKAAW
Trigger: CCATGCTGCCTTTATTCTCAAACTGGCAAACTTAGC...AGAGTAGTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp ACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCACACTGAGTATCATATaGCCAACCAGATGTTTGGGT +
Preference number: 5 (lower is better)
Translates to: TTELPVLELMRTTLKSVATLSII*PTRCLG
Trigger: ACCCAAACATCTGGTTGGCAATATGATACTCAGTGT...GGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp CCTAGTGTGCGAAACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTACTCTTTTTTAACTTCTCGCTaGGCTATGACTGGTCCACTT +
Preference number: 5 (lower is better)
Translates to: PSVRNDRATSSRTYENYSFLTSR*AMTGPL
Trigger: AAGTGGACCAGTCATAGCCAAGCGAGAAGTTAAAAA...AGAGTAGTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp GCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTTGTCAGGGAGTCCTCTACTCTCCTCCTCACTATTaGAGAGAGCCTGAATTCCTT +
Preference number: 5 (lower is better)
Translates to: ALVLEEKLILHFCQGVLYSPPHY*REPEFL
Trigger: AAGGAATTCAGGCTCTCTCAAATAGTGAGGAGGAGA...GTAGAGGACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp CTTTTGTCAGGGAGTCCTCTACAGAAGTGTTATACTCATGAGCCACATGTTCTTGAGCAGTCACTCCAATaGGGACAGAACATTCTGCAT +
Preference number: 5 (lower is better)
Translates to: LLSGSPLQKCYTHEPHVLEQSLQ*GQNILH
Trigger: ATGCAGAATGTTCTGTCCCAATTGGAGTGACTGCTC...AAGAACATGTGGCTCATGAGTATAACACTTCTGTAGAGGACTCCCTGACAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS TCA 90 bp TCCTCCTCACTTTCTCCAGATTGGACAACACTGCAAAGATCCTCCTaGGAAGGGTCTTCTATATTGTCCAACATAATTTCCTGTGGCTTT +
Preference number: 5 (lower is better)
Translates to: SSSLSPDWTTLQRSS*EGSSILSNIISCGF
Trigger: AAAGCCACAGGAAATTATGTTGGACAATATAGAAGACCCTTCTCAGGAGGATCTTTGCAGTGTTGTCCAATCTGGAGAAAGTGAGGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263773.10
ENST00000534003.5
ENST00000544590.1
ENST00000645979.1
ENST00000646180.2
ENST00000646586.1
CDS CCA 90 bp TTTTCAACTTTGGAACATATAAGGGATGTTGACAGTGGTCAGGAGTaGAGCCACCTATCCAGAACTACGATCAAGCCTCTTCAGTTCATT +
Preference number: 5 (lower is better)
Translates to: FSTLEHIRDVDSGQE*SHLSRTTIKPLQFI
Trigger: AATGAACTGAAGAGGCTTGATCGTAGTTCTGGATAGGTGGCTCCACTCCTGACCACTGTCAACATCCCTTATATGTTCCAAAGTTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525316.1
ENST00000646456.1
CDS-3UTR CAA 90 bp GGCCAGAAAAAGCTTCAGACAATTCCAGTCAAGCAAGGTAGAATGCAGAGCTGCTTTCCATTTGTCTCTTaGGATTGTGCTAGTTTTTCG +
Preference number: 5 (lower is better)
Translates to: GQKKLQTIPVKQGRMQSCFPFVS*DCASFS
Trigger: CGAAAAACTAGCACAATCCAAAGAGACAAATGGAAA...GCAGCTCTGCATTCTACCTTGCTTGACTGGAATTGTCTGAAGCTTTTTCTGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp GCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTTGTCAGGGAGTCCTCTACATCTCCGCTAGGAAGTaGGCCAATGTACTATCAATA +
Preference number: 5 (lower is better)
Translates to: ALVLEEKLILHFCQGVLYISARK*ANVLSI
Trigger: TATTGATAGTACATTGGCCAACTTCCTAGCGGAGAT...GTAGAGGACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp TTAATACATAGAGTGTCTTGTTGTATTTACTGCCACATACTTGAGGGGAAATTCATGTTGCTGCTTCCTTaGGCTCTGGTCGAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: LIHRVSCCIYCHILEGKFMLLLP*ALVEVE
Trigger: CTCCACCTCGACCAGAGCCAAAGGAAGCAGCAACAT...GAATTTCCCCTCAAGTATGTGGCAGTAAATACAACAAGACACTCTATGTATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp CGACTAGAGAAAAGAGGCCAGAAAAAGCTTCAGACAATTCCAGTCAAGCAAGGTACACTGAGTATCATATaGCCAACCAGATGTTTGGGT +
Preference number: 5 (lower is better)
Translates to: RLEKRGQKKLQTIPVKQGTLSII*PTRCLG
Trigger: ACCCAAACATCTGGTTGGCAATATGATACTCAGTGT...ACCTTGCTTGACTGGAATTGTCTGAAGCTTTTTCTGGCCTCTTTTCTCTAGTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp GTTCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGTCTCCTCCTCACTATTaGAGAGAGCCTGAATTCCTT +
Preference number: 5 (lower is better)
Translates to: VLELMRTTLKSVAIYQHESPPHY*REPEFL
Trigger: AAGGAATTCAGGCTCTCTCAAATAGTGAGGAGGAGA...CTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp GCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTTGTCAGGGAGTCCTCTACTCTTTCAAGGTCTGTTaGGCAAGAGTCTCATCTCTA +
Preference number: 5 (lower is better)
Translates to: ALVLEEKLILHFCQGVLYSFKVC*ARVSSL
Trigger: TAGAGATGAGACTCTTGCCAAACAGACCTTGAAAGA...GTAGAGGACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp AAGTTTGCCAGTTTGAGAATAAAGGCAGCATGGTCAAAGCAATTCCAATCACCTGAGCAGTCACTCCAATaGGGACAGAACATTCTGCAT +
Preference number: 5 (lower is better)
Translates to: KFASLRIKAAWSKQFQSPEQSLQ*GQNILH
Trigger: ATGCAGAATGTTCTGTCCCAATTGGAGTGACTGCTC...AGGTGATTGGAATTGCTTTGACCATGCTGCCTTTATTCTCAAACTGGCAAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp ACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTAAACCACTTAGACCTCTCACTGGAACTAGAATaGTCCTCTTCATCTAACTCA +
Preference number: 5 (lower is better)
Translates to: TTLKSVAIYQHEVNHLDLSLELE*SSSSNS
Trigger: TGAGTTAGATGAAGAGGACAATTCTAGTTCCAGTGA...GAGGTCTAAGTGGTTTACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp AACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTAAACCACTTAGACCTGTTAATTCTTCACTTTaGTCAGGGAGTCCTCTACAG +
Preference number: 5 (lower is better)
Translates to: NYSKECGHLSARGKPLRPVNSSL*SGSPLQ
Trigger: CTGTAGAGGACTCCCTGACAAAAGTGAAGAATTAAC...AGGTCTAAGTGGTTTACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp GGCCAGAAAAAGCTTCAGACAATTCCAGTCAAGCAAGGTAGAATGCAGAGCTGCTTTACTGCCACATACTaGAGGGGAAATTCTCAAAAT +
Preference number: 5 (lower is better)
Translates to: GQKKLQTIPVKQGRMQSCFTATY*RGNSQN
Trigger: ATTTTGAGAATTTCCCCTCAAGTATGTGGCAGTAAA...GCAGCTCTGCATTCTACCTTGCTTGACTGGAATTGTCTGAAGCTTTTTCTGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS TCA 90 bp ATTGGTAACAGTGGAATTTTCAACTTTGGAACATATAAGGGATGTTaGCAGTGGTCAGGAGTGGAGCCACCTATCCAGAACTACGATCAA +
Preference number: 5 (lower is better)
Translates to: IGNSGIFNFGTYKGC*QWSGVEPPIQNYDQ
Trigger: TTGATCGTAGTTCTGGATAGGTGGCTCCACTCCTGACCACTGTCAACATCCCTTATATGTTCCAAAGTTGAAAATTCCACTGTTACCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525316.1
ENST00000646456.1
CDS-3UTR CAA 90 bp CCTAGTGTGCGAAACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTACTCTTTTCCATTTGTCTCTTaGGATTGTGCTAGTTTTTCG +
Preference number: 5 (lower is better)
Translates to: PSVRNDRATSSRTYENYSFPFVS*DCASFS
Trigger: CGAAAAACTAGCACAATCCAAAGAGACAAATGGAAA...AGAGTAGTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp CGACTAGAGAAAAGAGGCCAGAAAAAGCTTCAGACAATTCCAGTCAAGCAAGGTTTGACTGGTTTCCATTaGTCTCTTTGGATTGTGCTA +
Preference number: 5 (lower is better)
Translates to: RLEKRGQKKLQTIPVKQGLTGFH*SLWIVL
Trigger: TAGCACAATCCAAAGAGACAAATGGAAACCAGTCAA...ACCTTGCTTGACTGGAATTGTCTGAAGCTTTTTCTGGCCTCTTTTCTCTAGTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp ACGACCGAGCTACCAGTTCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCGAAGGGTCTTCTATATaGTCCAACATAATTTCCTGT +
Preference number: 5 (lower is better)
Translates to: TTELPVLELMRTTLKSVAEGSSI*SNIISC
Trigger: ACAGGAAATTATGTTGGACAATATAGAAGACCCTTC...GGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGAACTGGTAGCTCGGTCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp TTGTCAGGGAGTCCTCTACAGAAGTGTTATACTCATGAGCCACATGTTCTTCAATCTTTCAAGGTCTGTTaGGCAAGAGTCTCATCTCTA +
Preference number: 5 (lower is better)
Translates to: LSGSPLQKCYTHEPHVLQSFKVC*ARVSSL
Trigger: TAGAGATGAGACTCTTGCCAAACAGACCTTGAAAGA...TTGAAGAACATGTGGCTCATGAGTATAACACTTCTGTAGAGGACTCCCTGACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp GTTCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGACCAAAGATGGCATTTaGGTCTTACTCTTCTTTGCC +
Preference number: 5 (lower is better)
Translates to: VLELMRTTLKSVAIYQHETKDGI*VLLFFA
Trigger: GGCAAAGAAGAGTAAGACCAAAATGCCATCTTTGGT...CTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp CTTTTGTCAGGGAGTCCTCTACAGAAGTGTTATACTCATGAGCCACATGTTCTTGTTAATTCTTCACTTTaGTCAGGGAGTCCTCTACAG +
Preference number: 5 (lower is better)
Translates to: LLSGSPLQKCYTHEPHVLVNSSL*SGSPLQ
Trigger: CTGTAGAGGACTCCCTGACAAAAGTGAAGAATTAAC...AAGAACATGTGGCTCATGAGTATAACACTTCTGTAGAGGACTCCCTGACAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS TCA 90 bp TCTTTAAAAATCAAAGGATCAAGTTTACCTCCTGCCAGTGAACACTaGGTATCATATTGCCAACCAGATGTTTGGGTGGAGTCTGTTCCA +
Preference number: 5 (lower is better)
Translates to: SLKIKGSSLPPASEH*VSYCQPDVWVESVP
Trigger: TGGAACAGACTCCACCCAAACATCTGGTTGGCAATATGATACTCAGTGTTCACTGGCAGGAGGTAAACTTGATCCTTTGATTTTTAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533707.1
ENST00000646081.1
CDS-3UTR CAA 90 bp GTTCTAGAACTTATGAGAACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGTTTTCGGAAACATCATaGTCATCGTCATCACTGTCA +
Preference number: 5 (lower is better)
Translates to: VLELMRTTLKSVAIYQHEFSETS*SSSSLS
Trigger: TGACAGTGATGACGATGACAATGATGTTTCCGAAAA...CTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTTCTCATAAGTTCTAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp AAGTTTGCCAGTTTGAGAATAAAGGCAGCATGGTCAAAGCAATTCCAATCACCTATCTCCGCTAGGAAGTaGGCCAATGTACTATCAATA +
Preference number: 5 (lower is better)
Translates to: KFASLRIKAAWSKQFQSPISARK*ANVLSI
Trigger: TATTGATAGTACATTGGCCAACTTCCTAGCGGAGAT...AGGTGATTGGAATTGCTTTGACCATGCTGCCTTTATTCTCAAACTGGCAAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp AACTACTCTAAAGAGTGTGGCCATCTATCAGCACGAGGTAAACCACTTAGACCTGAAGGGTCTTCTATATaGTCCAACATAATTTCCTGT +
Preference number: 5 (lower is better)
Translates to: NYSKECGHLSARGKPLRPEGSSI*SNIISC
Trigger: ACAGGAAATTATGTTGGACAATATAGAAGACCCTTC...AGGTCTAAGTGGTTTACCTCGTGCTGATAGATGGCCACACTCTTTAGAGTAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp CTGAATTGCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTTGTCAGGGAGTTACTTGTCAGGGTATTaGCCAGTTCTCCAATCTGAA +
Preference number: 5 (lower is better)
Translates to: LNCTCSGGEVNSSLLSGSYLSGY*PVLQSE
Trigger: TTCAGATTGGAGAACTGGCAAATACCCTGACAAGTA...ACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGCAATTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp CTGAATTGCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTTGTCAGGGAGTACCAAAGATGGCATTTaGGTCTTACTCTTCTTTGCC +
Preference number: 5 (lower is better)
Translates to: LNCTCSGGEVNSSLLSGSTKDGI*VLLFFA
Trigger: GGCAAAGAAGAGTAAGACCAAAATGCCATCTTTGGT...ACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGCAATTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp TTGTCAGGGAGTCCTCTACAGAAGTGTTATACTCATGAGCCACATGTTCTTCAATCACTGGAACTAGAATaGTCCTCTTCATCTAACTCA +
Preference number: 5 (lower is better)
Translates to: LSGSPLQKCYTHEPHVLQSLELE*SSSSNS
Trigger: TGAGTTAGATGAAGAGGACAATTCTAGTTCCAGTGA...TTGAAGAACATGTGGCTCATGAGTATAACACTTCTGTAGAGGACTCCCTGACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp TTAATACATAGAGTGTCTTGTTGTATTTACTGCCACATACTTGAGGGGAAATTCTTGCCAACCAGATGTTaGGGTGGAGTCTGTTCCATT +
Preference number: 5 (lower is better)
Translates to: LIHRVSCCIYCHILEGKFLPTRC*GGVCSI
Trigger: AATGGAACAGACTCCACCCAAACATCTGGTTGGCAA...GAATTTCCCCTCAAGTATGTGGCAGTAAATACAACAAGACACTCTATGTATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS GCA 90 bp TCAATTATGAAAGACTCTAGGGCAAGAAGGCCATTTACACTGCTTTaGTCAAAATACACACTGGCACTCAACAAGGTAAAACAAACAAAG +
Preference number: 5 (lower is better)
Translates to: SIMKDSRARRPFTLL*SKYTLALNKVKQTK
Trigger: CTTTGTTTGTTTTACCTTGTTGAGTGCCAGTGTGTATTTTGAGCAAAGCAGTGTAAATGGCCTTCTTGCCCTAGAGTCTTTCATAATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530207.1
ENST00000643840.1
CDS CCA 90 bp CACCTTCCCCATCTGTATTATACTTGTCCTTCGGGTCCATATTTATaGATGAGTAGAAGAATATTACATCAACTCAACGAGAAATGCAGT +
Preference number: 5 (lower is better)
Translates to: HLPHLYYTCPSGPYL*MSRRILHQLNEKCS
Trigger: ACTGCATTTCTCGTTGAGTTGATGTAATATTCTTCTACTCATCCATAAATATGGACCCGAAGGACAAGTATAATACAGATGGGGAAGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530207.1
ENST00000643840.1
CDS-3UTR CAA 90 bp CTGAATTGCACTTGTTCTGGAGGAGAAGTTAATTCTTCACTTTTGTCAGGGAGTTGTATGCATACACTCTaGCCCAGGAAATTTATAAGA +
Preference number: 5 (lower is better)
Translates to: LNCTCSGGEVNSSLLSGSCMHTL*PRKFIR
Trigger: TCTTATAAATTTCCTGGGCAAGAGTGTATGCATACA...ACTCCCTGACAAAAGTGAAGAATTAACTTCTCCTCCAGAACAAGTGCAATTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS TCA 90 bp TTCCCCATCTGTATTATACTTGTCCTTCGGGTCCATATTTATGGATaGGTAGAAGAATATTACATCAACTCAACGAGAAATGCAGTCATC +
Preference number: 5 (lower is better)
Translates to: FPICIILVLRVHIYG*VEEYYINSTRNAVI
Trigger: GATGACTGCATTTCTCGTTGAGTTGATGTAATATTCTTCTACTCATCCATAAATATGGACCCGAAGGACAAGTATAATACAGATGGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530207.1
ENST00000643840.1
CDS CCA 90 bp CCAATGTACTATCAATATCAGTTGACTGGTTTCCATTTGTCTCTTTaGATTGTGCTAGTTTTTCGGAAACATCATTGTCATCGTCATCAC +
Preference number: 5 (lower is better)
Translates to: PMYYQYQLTGFHLSL*IVLVFRKHHCHRHH
Trigger: GTGATGACGATGACAATGATGTTTCCGAAAAACTAGCACAATCCAAAGAGACAAATGGAAACCAGTCAACTGATATTGATAGTACATTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263773.10
ENST00000534003.5
ENST00000542975.1
ENST00000645979.1
ENST00000646180.2
ENST00000646517.1
CDS CCA 90 bp TCAAGAAAAGCCAAATATATAAAGAAATGTTTTCATCTGACCTGCTaGCAGAGGATAGTAATCTTGTTCTTCATTCACATCTTCAGCCAC +
Preference number: 5 (lower is better)
Translates to: SRKAKYIKKCFHLTC*QRIVILFFIHIFSH
Trigger: GTGGCTGAAGATGTGAATGAAGAACAAGATTACTATCCTCTGCCAGCAGGTCAGATGAAAACATTTCTTTATATATTTGGCTTTTCTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000528388.5
ENST00000534003.5
ENST00000642358.1
ENST00000645979.1
CDS-3UTR CAA 90 bp TTAATACATAGAGTGTCTTGTTGTATTTACTGCCACATACTTGAGGGGAAATTCACAAAAGTGAAAACTTaGTATGCATACACTCTTGCC +
Preference number: 5 (lower is better)
Translates to: LIHRVSCCIYCHILEGKFTKVKT*YAYTLA
Trigger: GGCAAGAGTGTATGCATACAAAGTTTTCACTTTTGT...GAATTTCCCCTCAAGTATGTGGCAGTAAATACAACAAGACACTCTATGTATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS-3UTR CAA 90 bp TTAATACATAGAGTGTCTTGTTGTATTTACTGCCACATACTTGAGGGGAAATTCTTTACTGCCACATACTaGAGGGGAAATTCTCAAAAT +
Preference number: 5 (lower is better)
Translates to: LIHRVSCCIYCHILEGKFFTATY*RGNSQN
Trigger: ATTTTGAGAATTTCCCCTCAAGTATGTGGCAGTAAA...GAATTTCCCCTCAAGTATGTGGCAGTAAATACAACAAGACACTCTATGTATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263773.10
ENST00000646180.2
CDS CCA 72 bp AGTCGTCCGAGGCCGCGGCGGCAGTCACCGCGGTGGTaGTGGTCGTCGCCGCCGACGGGGCGGGCTGGCTGG +
Preference number: 6 (lower is better)
Translates to: SRPRPRRQSPRW*WSSPPTGRAGW
Trigger: CCAGCCAGCCCGCCCCGTCGGCGGCGACGACCACCACCACCGCGGTGACTGCCGCCGCGGCCTCGGACGACT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000263773.10
ENST00000534003.5
ENST00000540172.2
ENST00000542975.1
ENST00000642545.1
ENST00000645979.1
ENST00000646180.2
ENST00000646517.1
CDS CAA 90 bp CGGGTCCCGGCCCGGCGTGCTGCCCCGAGGACCCGGCGGAGAGAGTaGCAGGATGGGCCTACGGCCGGGTACCGCCCGGGACTTCTTCCC +
Preference number: 6 (lower is better)
Translates to: RVPARRAAPRTRRRE*QDGPTAGYRPGLLP
Trigger: GGGAAGAAGTCCCGGGCGGTACCCGGCCGTAGGCCCATCCTGCAACTCTCTCCGCCGGGTCCTCGGGGCAGCACGCCGGGCCGGGACCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000263773.10
ENST00000534003.5
ENST00000540172.2
ENST00000542975.1
ENST00000642545.1
ENST00000645979.1
ENST00000646180.2
ENST00000646517.1
CDS GCA 72 bp CCCGGCGTGCTGCCCCGAGGACCCGGCGGAGAGAGTTaGAGGATGGGCCTACGGCCGGGTACCGCCCGGGAC +
Preference number: 6 (lower is better)
Translates to: PGVLPRGPGGES*RMGLRPGTARD
Trigger: GTCCCGGGCGGTACCCGGCCGTAGGCCCATCCTGCAACTCTCTCCGCCGGGTCCTCGGGGCAGCACGCCGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000263773.10
ENST00000534003.5
ENST00000540172.2
ENST00000542975.1
ENST00000642545.1
ENST00000645979.1
ENST00000646180.2
ENST00000646517.1
CDS CAA 72 bp GCCCGGCGTGCTGCCCCGAGGACCCGGCGGAGAGAGTaGCAGGATGGGCCTACGGCCGGGTACCGCCCGGGA +
Preference number: 6 (lower is better)
Translates to: ARRAAPRTRRRE*QDGPTAGYRPG
Trigger: TCCCGGGCGGTACCCGGCCGTAGGCCCATCCTGCAACTCTCTCCGCCGGGTCCTCGGGGCAGCACGCCGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000263773.10
ENST00000534003.5
ENST00000540172.2
ENST00000542975.1
ENST00000642545.1
ENST00000645979.1
ENST00000646180.2
ENST00000646517.1
CDS GCA 72 bp TGTCGGGTTCCGGCTCCGGGTCCCGGCCCGGCGTGCTaGCCCGAGGACCCGGCGGAGAGAGTTGCAGGATGG +
Preference number: 6 (lower is better)
Translates to: CRVPAPGPGPAC*PEDPAERVAGW
Trigger: CCATCCTGCAACTCTCTCCGCCGGGTCCTCGGGGCAGCACGCCGGGCCGGGACCCGGAGCCGGAACCCGACA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263773.10
ENST00000534003.5
ENST00000540172.2
ENST00000542975.1
ENST00000642545.1
ENST00000645979.1
ENST00000646180.2
ENST00000646517.1
CDS CCA 72 bp TGCTGCCCCGAGGACCCGGCGGAGAGAGTTGCAGGATaGGCCTACGGCCGGGTACCGCCCGGGACTTCTTCC +
Preference number: 6 (lower is better)
Translates to: CCPEDPAERVAG*AYGRVPPGTSS
Trigger: GGAAGAAGTCCCGGGCGGTACCCGGCCGTAGGCCCATCCTGCAACTCTCTCCGCCGGGTCCTCGGGGCAGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000263773.10
ENST00000534003.5
ENST00000540172.2
ENST00000542975.1
ENST00000642545.1
ENST00000645979.1
ENST00000646180.2
ENST00000646517.1
CDS CCA 72 bp GGCGGCCGAGAGGGGCGGGCACTGGAGGCTGGGCGCTaGGCCCTGGGCGCTGCGACGCGTAATCAATATTCA +
Preference number: 6 (lower is better)
Translates to: GGREGRALEAGR*ALGAATRNQYS
Trigger: TGAATATTGATTACGCGTCGCAGCGCCCAGGGCCCAGCGCCCAGCCTCCAGTGCCCGCCCCTCTCGGCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000540172.2
ENST00000542975.1
ENST00000642545.1
ENST00000646517.1
CDS TCA 72 bp TGGGCGCTGCGACGCGTAATCAATATTCATACACCGTaGCACCGCCTCCAGCCCGGATCCGCTTTCAACCAG +
Preference number: 6 (lower is better)
Translates to: WALRRVINIHTP*HRLQPGSAFNQ
Trigger: CTGGTTGAAAGCGGATCCGGGCTGGAGGCGGTGTCACGGTGTATGAATATTGATTACGCGTCGCAGCGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000540172.2
ENST00000542975.1
ENST00000642545.1
ENST00000646517.1
CDS GCA 72 bp TGGAGTTGGAGGTGGAGCAGAAGCTCCTACAGGAGCTaGAGGCTGAGGAGCTGTTATGGCATCGATCTCCGC +
Preference number: 6 (lower is better)
Translates to: WSWRWSRSSYRS*RLRSCYGIDLR
Trigger: GCGGAGATCGATGCCATAACAGCTCCTCAGCCTGCAGCTCCTGTAGGAGCTTCTGCTCCACCTCCAACTCCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263773.10
ENST00000533707.1
ENST00000534003.5
ENST00000645979.1
ENST00000646081.1
ENST00000646180.2
CDS GCA 72 bp ATGTGTGGCTGGCCAAACTTTGTGCTTGCGGTGCTTTaGCTGCCCAGCACCGCTAACTGCAGCTGCTCTCAG +
Preference number: 6 (lower is better)
Translates to: MCGWPNFVLAVL*LPSTANCSCSQ
Trigger: CTGAGAGCAGCTGCAGTTAGCGGTGCTGGGCAGGCAAAGCACCGCAAGCACAAAGTTTGGCCAGCCACACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534003.5
ENST00000645979.1
CDS GCA 72 bp CTCCAATGTGTGGCTGGCCAAACTTTGTGCTTGCGGTaGTTTGCCTGCCCAGCACCGCTAACTGCAGCTGCT +
Preference number: 6 (lower is better)
Translates to: LQCVAGQTLCLR*FACPAPLTAAA
Trigger: AGCAGCTGCAGTTAGCGGTGCTGGGCAGGCAAAGCACCGCAAGCACAAAGTTTGGCCAGCCACACATTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534003.5
ENST00000645979.1
CDS TCA 72 bp GGTAGGCACAGCACCTCGGGCCTGAACTGGCTGCAATaGGGGAGCAGTCACTCCAATTGGGACAGAACATTC +
Preference number: 6 (lower is better)
Translates to: GRHSTSGLNWLQ*GSSHSNWDRTF
Trigger: GAATGTTCTGTCCCAATTGGAGTGACTGCTCCCTCATTGCAGCCAGTTCAGGCCCGAGGTGCTGTGCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263773.10
ENST00000530207.1
ENST00000532646.6
ENST00000643840.1
ENST00000646180.2
ENST00000646200.1
CDS GCA 72 bp TGGAGTTGGAGGTGGAGCAGAAGCTCCTACAGGAGCTaGAGGCTGAGGAGCTGTTATGGCATCGATCTCCTG +
Preference number: 6 (lower is better)
Translates to: WSWRWSRSSYRS*RLRSCYGIDLL
Trigger: CAGGAGATCGATGCCATAACAGCTCCTCAGCCTGCAGCTCCTGTAGGAGCTTCTGCTCCACCTCCAACTCCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540172.2
ENST00000642545.1
CDS CCA 72 bp GGTAGATGTTGCTGCTTCCTTTGGCTCTGGTCGAGGTaGAGTTGGAGGTGGAGCAGAAGCTCCTACAGGAGC +
Preference number: 6 (lower is better)
Translates to: GRCCCFLWLWSR*SWRWSRSSYRS
Trigger: GCTCCTGTAGGAGCTTCTGCTCCACCTCCAACTCCACCTCGACCAGAGCCAAAGGAAGCAGCAACATCTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263773.10
ENST00000533707.1
ENST00000534003.5
ENST00000540172.2
ENST00000642545.1
ENST00000645979.1
ENST00000646081.1
ENST00000646180.2
CDS GCA 72 bp TCGCATGCGCTTAACCCCCAAGCCCGCCCTACTCCGTaGAACACTCTGGAGAGTAAAAACCAGCTTTGTCCA +
Preference number: 6 (lower is better)
Translates to: SHALNPQARPTP*NTLESKNQLCP
Trigger: TGGACAAAGCTGGTTTTTACTCTCCAGAGTGTTGCACGGAGTAGGGCGGGCTTGGGGGTTAAGCGCATGCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000524696.1
ENST00000534003.5
ENST00000643282.1
ENST00000645979.1
CDS TCA 72 bp TGCTGGCTGGCTGATATCAGAACGTGGACTAGACCCTaGCACACTACCATCTCCTTCCTCCAAGGCTCGCAA +
Preference number: 6 (lower is better)
Translates to: CWLADIRTWTRP*HTTISFLQGSQ
Trigger: TTGCGAGCCTTGGAGGAAGGAGATGGTAGTGTGTCAGGGTCTAGTCCACGTTCTGATATCAGCCAGCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263773.10
ENST00000534003.5
ENST00000544590.1
ENST00000645979.1
ENST00000646180.2
ENST00000646586.1
CDS CAA 72 bp TTGTTTCTCCAATGTGTGGCTGGCCAAACTTTGTGCTaGCGGTGCTTTGCCTGCCCAGCACCGCTAACTGCA +
Preference number: 6 (lower is better)
Translates to: LFLQCVAGQTLC*RCFACPAPLTA
Trigger: TGCAGTTAGCGGTGCTGGGCAGGCAAAGCACCGCAAGCACAAAGTTTGGCCAGCCACACATTGGAGAAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534003.5
ENST00000645979.1
CDS CAA 90 bp ACATTGCTTTTGTTTCTCCAATGTGTGGCTGGCCAAACTTTGTGCTaGCGGTGCTTTGCCTGCCCAGCACCGCTAACTGCAGCTGCTCTC +
Preference number: 6 (lower is better)
Translates to: TLLLFLQCVAGQTLC*RCFACPAPLTAAAL
Trigger: GAGAGCAGCTGCAGTTAGCGGTGCTGGGCAGGCAAAGCACCGCAAGCACAAAGTTTGGCCAGCCACACATTGGAGAAACAAAAGCAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534003.5
ENST00000645979.1
CDS GCA 72 bp TTTTCCTTAACTTCACCGAGGTTAATCAGGAGTAGTTaGTTCCAGAGGTCCTGTCCCAGTGGCAGGACCAGC +
Preference number: 6 (lower is better)
Translates to: FSLTSPRLIRSS*FQRSCPSGRTS
Trigger: GCTGGTCCTGCCACTGGGACAGGACCTCTGGAAGCAACTACTCCTGATTAACCTCGGTGAAGTTAAGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528388.5
ENST00000642358.1
CDS CCA 72 bp TTAACCCCCAAGCCCGCCCTACTCCGTGCAACACTCTaGAGAGTAAAAACCAGCTTTGTCCATATCTTGGGA +
Preference number: 6 (lower is better)
Translates to: LTPKPALLRATL*RVKTSFVHILG
Trigger: TCCCAAGATATGGACAAAGCTGGTTTTTACTCTCCAGAGTGTTGCACGGAGTAGGGCGGGCTTGGGGGTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000524696.1
ENST00000534003.5
ENST00000643282.1
ENST00000645979.1
CDS TCA 72 bp TCGCCCATCTCAATTCCGACTCCTGCCAGTGAACACTaGGTATCATATTGCCAACCAGATGTTTGGGTGGAG +
Preference number: 6 (lower is better)
Translates to: SPISIPTPASEH*VSYCQPDVWVE
Trigger: CTCCACCCAAACATCTGGTTGGCAATATGATACTCAGTGTTCACTGGCAGGAGTCGGAATTGAGATGGGCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263773.10
ENST00000534003.5
ENST00000645979.1
ENST00000646180.2
CDS TCA 72 bp CCCATTCCTGCTGCTGGAAGGCTAACTGGTATTGTCTaGTGTCCAATTCCTGTTGCCTGGTTTCCAATCCCT +
Preference number: 6 (lower is better)
Translates to: PIPAAGRLTGIV*CPIPVAWFPIP
Trigger: AGGGATTGGAAACCAGGCAACAGGAATTGGACATCAGACAATACCAGTTAGCCTTCCAGCAGCAGGAATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263773.10
ENST00000530207.1
ENST00000532646.6
ENST00000643840.1
ENST00000646180.2
ENST00000646200.1
CDS CAA 90 bp TGGAGTGTAGGTGGTGCGATCATAGCTCATTCTAACCTCAAACACTaGGCTCAAGCGATCTTCCTACCTCAGCTTCCCGAATTGCTAGGA +
Preference number: 6 (lower is better)
Translates to: WSVGGAIIAHSNLKH*AQAIFLPQLPELLG
Trigger: TCCTAGCAATTCGGGAAGCTGAGGTAGGAAGATCGCTTGAGCCAAGTGTTTGAGGTTAGAATGAGCTATGATCGCACCACCTACACTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530207.1
ENST00000643840.1
CDS TCA 72 bp CTGGCTATAGAGAACTGGAGAACTGCCAATGGTAGCTaGCCTCTGAACCACTGCAGTGCTAATTTCTGTAGC +
Preference number: 6 (lower is better)
Translates to: LAIENWRTANGS*PLNHCSANFCS
Trigger: GCTACAGAAATTAGCACTGCAGTGGTTCAGAGGTCAGCTACCATTGGCAGTTCTCCAGTTCTCTATAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263773.10
ENST00000526109.6
ENST00000530207.1
ENST00000532646.6
ENST00000642489.1
ENST00000643840.1
ENST00000646180.2
ENST00000646200.1
CDS GCA 72 bp TCTTTTAGACATAAGCCTACGCATTCCATCTTGAGATaGTGGCTGGCTGATATCAGAACGTGGACTAGACCC +
Preference number: 6 (lower is better)
Translates to: SFRHKPTHSILR*WLADIRTWTRP
Trigger: GGGTCTAGTCCACGTTCTGATATCAGCCAGCCAGCATCTCAAGATGGAATGCGTAGGCTTATGTCTAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000263773.10
ENST00000527894.1
ENST00000534003.5
ENST00000544590.1
ENST00000645979.1
ENST00000646180.2
ENST00000646452.1
ENST00000646586.1
CDS GCA 72 bp TTTTCCTTAACTTCACCGAGGTTAATCAGGAGTAGTTaGTTCCAGAGGTCCTGTAAAGCGCACAGAGCTCTC +
Preference number: 6 (lower is better)
Translates to: FSLTSPRLIRSS*FQRSCKAHRAL
Trigger: GAGAGCTCTGTGCGCTTTACAGGACCTCTGGAAGCAACTACTCCTGATTAACCTCGGTGAAGTTAAGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000524696.1
ENST00000531394.1
ENST00000534003.5
ENST00000643282.1
ENST00000645151.1
ENST00000645979.1
CDS CCA 72 bp TTTAACAGCTGTGGGTCTAGTGGTCATGACTGGTTTTaGAGGATTCTGAACAACTCTAGGAACCTCCTGCAC +
Preference number: 6 (lower is better)
Translates to: FNSCGSSGHDWF*RILNNSRNLLH
Trigger: GTGCAGGAGGTTCCTAGAGTTGTTCAGAATCCTCCAAAACCAGTCATGACCACTAGACCCACAGCTGTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263773.10
ENST00000534003.5
ENST00000540172.2
ENST00000642545.1
ENST00000645979.1
ENST00000646180.2
CDS CCA 72 bp AACTGGGCTGGTAATGCTGTAATCCCTGTACCTGTGTaGCAAGATATTGGGGTAACTCCCAAGTCACTTCAT +
Preference number: 6 (lower is better)
Translates to: NWAGNAVIPVPV*QDIGVTPKSLH
Trigger: ATGAAGTGACTTGGGAGTTACCCCAATATCTTGCCACACAGGTACAGGGATTACAGCATTACCAGCCCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263773.10
ENST00000534003.5
ENST00000645979.1
ENST00000646180.2
CDS CCA 72 bp ACTTTAAACATTGCTTTTGTTTCTCCAATGTGTGGCTaGCCAAACTTTGTGCTTGCGGTGCTTTGCCTGCCC +
Preference number: 6 (lower is better)
Translates to: TLNIAFVSPMCG*PNFVLAVLCLP
Trigger: GGGCAGGCAAAGCACCGCAAGCACAAAGTTTGGCCAGCCACACATTGGAGAAACAAAAGCAATGTTTAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534003.5
ENST00000645979.1
CDS CAA 72 bp GCAGTTGATTCCCGATCCTCTTCACTGGAACTAGAATaGTCCTCTTCATCTAACTCACGCTGGATACTCTGC +
Preference number: 6 (lower is better)
Translates to: AVDSRSSSLELE*SSSSNSRWILC
Trigger: GCAGAGTATCCAGCGTGAGTTAGATGAAGAGGACAATTCTAGTTCCAGTGAAGAGGATCGGGAATCAACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263773.10
ENST00000526109.6
ENST00000642489.1
ENST00000646180.2
CDS TCA 72 bp CTGCTGTTTCCACTCTTCAATTCGCTTCTGTGCAGTTaGTTCCCGATCCTCTTCACTGGAACTAGAATTGTC +
Preference number: 6 (lower is better)
Translates to: LLFPLFNSLLCS*FPILFTGTRIV
Trigger: GACAATTCTAGTTCCAGTGAAGAGGATCGGGAATCAACTGCACAGAAGCGAATTGAAGAGTGGAAACAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263773.10
ENST00000526109.6
ENST00000642489.1
ENST00000646180.2
CDS CCA 72 bp TGTTGCTTTAACAGCTGTGGGTCTAGTGGTCATGACTaGTTTTGGAGGATTCTGAACAACTCTAGGAACCTC +
Preference number: 6 (lower is better)
Translates to: CCFNSCGSSGHD*FWRILNNSRNL
Trigger: GAGGTTCCTAGAGTTGTTCAGAATCCTCCAAAACCAGTCATGACCACTAGACCCACAGCTGTTAAAGCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263773.10
ENST00000534003.5
ENST00000540172.2
ENST00000642545.1
ENST00000645979.1
ENST00000646180.2
CDS CAA 90 bp TCAACCTCCTCAGTTAAAGGTAATGAAACCCAGGCAGGAACTAACTaGCCCAAGATCATATCAATGTTAGTGGCCAGACCAGAGCTAGAA +
Preference number: 6 (lower is better)
Translates to: STSSVKGNETQAGTN*PKIISMLVARPELE
Trigger: TTCTAGCTCTGGTCTGGCCACTAACATTGATATGATCTTGGGCAAGTTAGTTCCTGCCTGGGTTTCATTACCTTTAACTGAGGAGGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530207.1
ENST00000643840.1
CDS TCA 72 bp TTTCCTCTTTTAGACATAAGCCTACGCATTCCATCTTaGGATGCTGGCTGGCTGATATCAGAACGTGGACTA +
Preference number: 6 (lower is better)
Translates to: FPLLDISLRIPS*DAGWLISERGL
Trigger: TAGTCCACGTTCTGATATCAGCCAGCCAGCATCTCAAGATGGAATGCGTAGGCTTATGTCTAAAAGAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000263773.10
ENST00000527894.1
ENST00000534003.5
ENST00000544590.1
ENST00000645979.1
ENST00000646180.2
ENST00000646452.1
ENST00000646586.1
CDS TCA 72 bp AGTGGAATTTTCAACTTTGGAACATATAAGGGATGTTaGCAGTGGTCAGGAGTGGAGCCACCTATCCAGAAC +
Preference number: 6 (lower is better)
Translates to: SGIFNFGTYKGC*QWSGVEPPIQN
Trigger: GTTCTGGATAGGTGGCTCCACTCCTGACCACTGTCAACATCCCTTATATGTTCCAAAGTTGAAAATTCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525316.1
ENST00000646456.1
CDS CAA 72 bp TTTTCCTCTTTTAGACATAAGCCTACGCATTCCATCTaGAGATGCTGGCTGGCTGATATCAGAACGTGGACT +
Preference number: 6 (lower is better)
Translates to: FSSFRHKPTHSI*RCWLADIRTWT
Trigger: AGTCCACGTTCTGATATCAGCCAGCCAGCATCTCAAGATGGAATGCGTAGGCTTATGTCTAAAAGAGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000263773.10
ENST00000527894.1
ENST00000534003.5
ENST00000544590.1
ENST00000645979.1
ENST00000646180.2
ENST00000646452.1
ENST00000646586.1
CDS CAA 72 bp ACCGTCTATGATCCCTGCTGGCAGAGGATAGTAATCTaGTTCTTCATTCACATCTTCAGCCACGAAGTTTTC +
Preference number: 6 (lower is better)
Translates to: TVYDPCWQRIVI*FFIHIFSHEVF
Trigger: GAAAACTTCGTGGCTGAAGATGTGAATGAAGAACAAGATTACTATCCTCTGCCAGCAGGGATCATAGACGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529156.1
ENST00000531394.1
ENST00000643470.1
ENST00000645151.1
CDS CCA 72 bp TCGTCCAGTTTTACTAGAACTCCTACTGGTAGATTCTaGACTGGTAGCTCGAACAAACATCTTCCATTTTCC +
Preference number: 6 (lower is better)
Translates to: SSSFTRTPTGRF*TGSSNKHLPFS
Trigger: GGAAAATGGAAGATGTTTGTTCGAGCTACCAGTCCAGAATCTACCAGTAGGAGTTCTAGTAAAACTGGACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000263773.10
ENST00000527894.1
ENST00000534003.5
ENST00000544590.1
ENST00000645979.1
ENST00000646180.2
ENST00000646452.1
ENST00000646586.1
CDS CAA 72 bp TCAGTTAAAGGTAATGAAACCCAGGCAGGAACTAACTaGCCCAAGATCATATCAATGTTAGTGGCCAGACCA +
Preference number: 6 (lower is better)
Translates to: SVKGNETQAGTN*PKIISMLVARP
Trigger: TGGTCTGGCCACTAACATTGATATGATCTTGGGCAAGTTAGTTCCTGCCTGGGTTTCATTACCTTTAACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530207.1
ENST00000643840.1
CDS CAA 90 bp CATCGATCTCCGCTAGGAAGTTGGCCAATGTACTATCAATATCAGTaGACTGGTTTCCATTTGTCTCTTTGGATTGTGCTAGTTTTTCGG +
Preference number: 6 (lower is better)
Translates to: HRSPLGSWPMYYQYQ*TGFHLSLWIVLVFR
Trigger: CCGAAAAACTAGCACAATCCAAAGAGACAAATGGAAACCAGTCAACTGATATTGATAGTACATTGGCCAACTTCCTAGCGGAGATCGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000263773.10
ENST00000533707.1
ENST00000534003.5
ENST00000542975.1
ENST00000645979.1
ENST00000646081.1
ENST00000646180.2
ENST00000646517.1
CDS TCA 72 bp CTTTCTCCAGATTGGACAACACTGCAAAGATCCTCCTaGGAAGGGTCTTCTATATTGTCCAACATAATTTCC +
Preference number: 6 (lower is better)
Translates to: LSPDWTTLQRSS*EGSSILSNIIS
Trigger: GGAAATTATGTTGGACAATATAGAAGACCCTTCTCAGGAGGATCTTTGCAGTGTTGTCCAATCTGGAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263773.10
ENST00000534003.5
ENST00000544590.1
ENST00000645979.1
ENST00000646180.2
ENST00000646586.1
CDS TCA 72 bp TCTGCAATTCGAGTCTCAGTCTGTAAGAGCAGCACATaGAAGTTGGAGATGGATTGTCTATTAATGCCTAGA +
Preference number: 6 (lower is better)
Translates to: SAIRVSVCKSST*KLEMDCLLMPR
Trigger: TCTAGGCATTAATAGACAATCCATCTCCAACTTTCATGTGCTGCTCTTACAGACTGAGACTCGAATTGCAGA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000263773.10
ENST00000525792.5
ENST00000527894.1
ENST00000528388.5
ENST00000534003.5
ENST00000642358.1
ENST00000645979.1
ENST00000646180.2
ENST00000646452.1
ENST00000647023.1
CDS CAA 72 bp TGTTTTCATCTGACCTGCTGGCAGAGGATAGTAATCTaGTTCTTCATTCACATCTTCAGCCACGAAGTTTTC +
Preference number: 6 (lower is better)
Translates to: CFHLTCWQRIVI*FFIHIFSHEVF
Trigger: GAAAACTTCGTGGCTGAAGATGTGAATGAAGAACAAGATTACTATCCTCTGCCAGCAGGTCAGATGAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000528388.5
ENST00000534003.5
ENST00000642358.1
ENST00000645979.1
CDS CAA 90 bp GTACCTGTGTGGCAAGATATTGGGGTAACTCCCAAGTCACTTCATTaGTTTGTGTATTCCAATAATAATAACATCCCGTGTTCTCATCCC +
Preference number: 6 (lower is better)
Translates to: VPVWQDIGVTPKSLH*FVYSNNNNIPCSHP
Trigger: GGGATGAGAACACGGGATGTTATTATTATTGGAATACACAAACAAATGAAGTGACTTGGGAGTTACCCCAATATCTTGCCACACAGGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263773.10
ENST00000534003.5
ENST00000645979.1
ENST00000646180.2
CDS TCA 72 bp TTGCTGTTGCTGAAGTCTACATTACGAAATTGCAGCTaGAAAGTTGCAGGATCAGCTTTCCTCAAACTTTGT +
Preference number: 6 (lower is better)
Translates to: LLLLKSTLRNCS*KVAGSAFLKLC
Trigger: ACAAAGTTTGAGGAAAGCTGATCCTGCAACTTTTCAGCTGCAATTTCGTAATGTAGACTTCAGCAACAGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530207.1
ENST00000643840.1
CDS CAA 90 bp TCTGTTGAATTTGAATCAGTGCCAGTTTTGTCTTTCAAGGTCTGTTaGGCAAGAGTCTCATCTCTATTTTCTTGTGCTTGGCTTTCTTCT +
Preference number: 6 (lower is better)
Translates to: SVEFESVPVLSFKVC*ARVSSLFSCAWLSS
Trigger: AGAAGAAAGCCAAGCACAAGAAAATAGAGATGAGACTCTTGCCAAACAGACCTTGAAAGACAAAACTGGCACTGATTCAAATTCAACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000263773.10
ENST00000525316.1
ENST00000525792.5
ENST00000529156.1
ENST00000531394.1
ENST00000643470.1
ENST00000645151.1
ENST00000646180.2
ENST00000646456.1
ENST00000647023.1
CDS TCA 72 bp ATGGTCAAAAGTGGTAGATTAAATAAGGCTCAATTATaGAAGACTCTAGGGCAAGAAGGCCATTTACACTGC +
Preference number: 6 (lower is better)
Translates to: MVKSGRLNKAQL*KTLGQEGHLHC
Trigger: GCAGTGTAAATGGCCTTCTTGCCCTAGAGTCTTTCATAATTGAGCCTTATTTAATCTACCACTTTTGACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530207.1
ENST00000643840.1
CDS CAA 72 bp TTTGAAATTGCTGTTGCTGAAGTCTACATTACGAAATaGCAGCTGAAAAGTTGCAGGATCAGCTTTCCTCAA +
Preference number: 6 (lower is better)
Translates to: FEIAVAEVYITK*QLKSCRISFPQ
Trigger: TTGAGGAAAGCTGATCCTGCAACTTTTCAGCTGCAATTTCGTAATGTAGACTTCAGCAACAGCAATTTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530207.1
ENST00000643840.1
CDS CAA 90 bp GCCAATGTACTATCAATATCAGTTGACTGGTTTCCATTTGTCTCTTaGGATTGTGCTAGTTTTTCGGAAACATCATTGTCATCGTCATCA +
Preference number: 6 (lower is better)
Translates to: ANVLSISVDWFPFVS*DCASFSETSLSSSS
Trigger: TGATGACGATGACAATGATGTTTCCGAAAAACTAGCACAATCCAAAGAGACAAATGGAAACCAGTCAACTGATATTGATAGTACATTGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263773.10
ENST00000534003.5
ENST00000542975.1
ENST00000645979.1
ENST00000646180.2
ENST00000646517.1
CDS CAA 90 bp GGAAGTTGGCCAATGTACTATCAATATCAGTTGACTGGTTTCCATTaGTCTCTTTGGATTGTGCTAGTTTTTCGGAAACATCATTGTCAT +
Preference number: 6 (lower is better)
Translates to: GSWPMYYQYQLTGFH*SLWIVLVFRKHHCH
Trigger: ATGACAATGATGTTTCCGAAAAACTAGCACAATCCAAAGAGACAAATGGAAACCAGTCAACTGATATTGATAGTACATTGGCCAACTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263773.10
ENST00000534003.5
ENST00000542975.1
ENST00000645979.1
ENST00000646180.2
ENST00000646517.1
CDS CAA 90 bp ATAAAGAAATGTTTTCATCTGACCTGCTGGCAGAGGATAGTAATCTaGTTCTTCATTCACATCTTCAGCCACGAAGTTTTCCTTAACTTC +
Preference number: 6 (lower is better)
Translates to: IKKCFHLTCWQRIVI*FFIHIFSHEVFLNF
Trigger: GAAGTTAAGGAAAACTTCGTGGCTGAAGATGTGAATGAAGAACAAGATTACTATCCTCTGCCAGCAGGTCAGATGAAAACATTTCTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000528388.5
ENST00000534003.5
ENST00000642358.1
ENST00000645979.1
CDS CAA 72 bp TCTAAAGTCATTTTGGCTGAATTAGTACAAGGTAAATaGTCTCACCTGTGGAAGTTTCAGAGGATTCTGTTG +
Preference number: 6 (lower is better)
Translates to: SKVILAELVQGK*SHLWKFQRILL
Trigger: CAACAGAATCCTCTGAAACTTCCACAGGTGAGACAATTTACCTTGTACTAATTCAGCCAAAATGACTTTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529156.1
ENST00000643470.1
CDS TCA 72 bp ACAGGCATCTATTCTATACTGATATCGCTAAAATATTaGACAACTCAGTTCAGAAATGACTTCCACGGAAAG +
Preference number: 6 (lower is better)
Translates to: TGIYSILISLKY*TTQFRNDFHGK
Trigger: CTTTCCGTGGAAGTCATTTCTGAACTGAGTTGTTCAATATTTTAGCGATATCAGTATAGAATAGATGCCTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530207.1
ENST00000643840.1
CDS CCA 72 bp GCCAAATATATAAAGAAATGTTTTCATCTGACCTGCTaGCAGAGGATAGTAATCTTGTTCTTCATTCACATC +
Preference number: 6 (lower is better)
Translates to: AKYIKKCFHLTC*QRIVILFFIHI
Trigger: GATGTGAATGAAGAACAAGATTACTATCCTCTGCCAGCAGGTCAGATGAAAACATTTCTTTATATATTTGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528388.5
ENST00000534003.5
ENST00000642358.1
ENST00000645979.1
CDS CAA 72 bp CTATCAATATCAGTTGACTGGTTTCCATTTGTCTCTTaGGATTGTGCTAGTTTTTCGGAAACATCATTGTCA +
Preference number: 6 (lower is better)
Translates to: LSISVDWFPFVS*DCASFSETSLS
Trigger: TGACAATGATGTTTCCGAAAAACTAGCACAATCCAAAGAGACAAATGGAAACCAGTCAACTGATATTGATAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263773.10
ENST00000534003.5
ENST00000542975.1
ENST00000645979.1
ENST00000646180.2
ENST00000646517.1
CDS CAA 72 bp CCAATGTACTATCAATATCAGTTGACTGGTTTCCATTaGTCTCTTTGGATTGTGCTAGTTTTTCGGAAACAT +
Preference number: 6 (lower is better)
Translates to: PMYYQYQLTGFH*SLWIVLVFRKH
Trigger: ATGTTTCCGAAAAACTAGCACAATCCAAAGAGACAAATGGAAACCAGTCAACTGATATTGATAGTACATTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000263773.10
ENST00000533707.1
ENST00000534003.5
ENST00000542975.1
ENST00000645979.1
ENST00000646081.1
ENST00000646180.2
ENST00000646517.1