Pregenerated sensors for FN3K (Homo sapiens)
Ensembl gene IDs: ENSG00000167363Ensembl transcript IDs: ENST00000300784.8, ENST00000570734.1, ENST00000572813.1, ENST00000574496.5
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GAGGATGCACAGGCCACGTGTGGGTGCCCGGGAGCACTGAGGGCGTaGGGAGGTGTGAGTGAACCAAGGTCCAGAGCTGGACCCCCGGGC | + |
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Preference number: 5 (lower is better) Translates to: EDAQATCGCPGALRA*GGVSEPRSRAGPPG Trigger: GCCCGGGGGTCCAGCTCTGGACCTTGGTTCACTCACACCTCCCCACGCCCTCAGTGCTCCCGGGCACCCACACGTGGCCTGTGCATCCTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000570734.1 |
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| CDS GCA 90 bp | AACCAAGGTCCAGAGCTGGACCCCCGGGCTACCCACCTTCCTTGCTaGCTCTTAGGGTGGGGCAGCCACAGCAGAGGCCTCACTGGAGCT | + |
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Preference number: 5 (lower is better) Translates to: NQGPELDPRATHLPC*LLGWGSHSRGLTGA Trigger: AGCTCCAGTGAGGCCTCTGCTGTGGCTGCCCCACCCTAAGAGGCAGCAAGGAAGGTGGGTAGCCCGGGGGTCCAGCTCTGGACCTTGGTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000570734.1 |
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| CDS GCA 90 bp | GTGAACCAAGGTCCAGAGCTGGACCCCCGGGCTACCCACCTTCCTTaGTGCCTCTTAGGGTGGGGCAGCCACAGCAGAGGCCTCACTGGA | + |
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Preference number: 5 (lower is better) Translates to: VNQGPELDPRATHLP*CLLGWGSHSRGLTG Trigger: TCCAGTGAGGCCTCTGCTGTGGCTGCCCCACCCTAAGAGGCAGCAAGGAAGGTGGGTAGCCCGGGGGTCCAGCTCTGGACCTTGGTTCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000570734.1 |
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| CDS CCA 90 bp | GAGCTGGACCCCCGGGCTACCCACCTTCCTTGCTGCCTCTTAGGGTaGGGCAGCCACAGCAGAGGCCTCACTGGAGCTAACTTGGGCACA | + |
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Preference number: 5 (lower is better) Translates to: ELDPRATHLPCCLLG*GSHSRGLTGANLGT Trigger: TGTGCCCAAGTTAGCTCCAGTGAGGCCTCTGCTGTGGCTGCCCCACCCTAAGAGGCAGCAAGGAAGGTGGGTAGCCCGGGGGTCCAGCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000570734.1 |
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| CDS TCA 90 bp | GGGACCAGAGTTCTCGTGCCTCTCGGTCAGCATAGTCCTTCTCAATaGGGTCCAGCTGCGCCTGGAGCCGGTGCCGGGCGAAAAAGGTCG | + |
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Preference number: 5 (lower is better) Translates to: GTRVLVPLGQHSPSQ*GPAAPGAGAGRKRS Trigger: CGACCTTTTTCGCCCGGCACCGGCTCCAGGCGCAGCTGGACCTCATTGAGAAGGACTATGCTGACCGAGAGGCACGAGAACTCTGGTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000300784.8 ENST00000570734.1 |
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| CDS GCA 90 bp | CGGGATCATGAGAGGACCAGCTCTTTCCCAGAGAAGTCACTGCCGTaGCCACCTGTAGCCGGGACCAGAGTTCTCGTGCCTCTCGGTCAG | + |
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Preference number: 5 (lower is better) Translates to: RDHERTSSFPEKSLP*PPVAGTRVLVPLGQ Trigger: CTGACCGAGAGGCACGAGAACTCTGGTCCCGGCTACAGGTGGGCACGGCAGTGACTTCTCTGGGAAAGAGCTGGTCCTCTCATGATCCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000570734.1 |
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| CDS CCA 90 bp | TTTCAGCAGGAGATAGAAATCAGGTCTAAACACAGACAAGGCCTGTaGGAAGGAGAACGCTGGCCTGGCCCGTGGGGTCCCTGCCAGGGG | + |
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Preference number: 5 (lower is better) Translates to: FQQEIEIRSKHRQGL*EGERWPGPWGPCQG Trigger: CCCCTGGCAGGGACCCCACGGGCCAGGCCAGCGTTCTCCTTCCCACAGGCCTTGTCTGTGTTTAGACCTGATTTCTATCTCCTGCTGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000570734.1 ENST00000572813.1 |
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| CDS CCA 90 bp | AAGGCACGGCACACCCGGCCGGCCCCCAACGCCTCCCGTGGGACCTaGGCCTTCCTGTTTCTGAAATATTCCCACAAACATTCCAGTTTT | + |
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Preference number: 5 (lower is better) Translates to: KARHTRPAPNASRGT*AFLFLKYSHKHSSF Trigger: AAAACTGGAATGTTTGTGGGAATATTTCAGAAACAGGAAGGCCCAGGTCCCACGGGAGGCGTTGGGGGCCGGCCGGGTGTGCCGTGCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000570734.1 |
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| CDS GCA 90 bp | AGTGTTCCCTGCTCCAGCTCCGTTTTACAGATGAACCCGCACAAATaGGGCGGGATCATGAGAGGACCAGCTCTTTCCCAGAGAAGTCAC | + |
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Preference number: 5 (lower is better) Translates to: SVPCSSSVLQMNPHK*GGIMRGPALSQRSH Trigger: GTGACTTCTCTGGGAAAGAGCTGGTCCTCTCATGATCCCGCCGCATTTGTGCGGGTTCATCTGTAAAACGGAGCTGGAGCAGGGAACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570734.1 |
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| CDS CCA 90 bp | CTGGATCATCTGGTACCCACATCTTCCCATGGGAGAGGAACACGATaGAGTGGACAAGTGTTACTGATAGTAAGAACAGTAATCATGGTA | + |
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Preference number: 5 (lower is better) Translates to: LDHLVPTSSHGRGTR*SGQVLLIVRTVIMV Trigger: TACCATGATTACTGTTCTTACTATCAGTAACACTTGTCCACTCCATCGTGTTCCTCTCCCATGGGAAGATGTGGGTACCAGATGATCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000570734.1 |
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| CDS CCA 90 bp | TCATCTGGTACCCACATCTTCCCATGGGAGAGGAACACGATGGAGTaGACAAGTGTTACTGATAGTAAGAACAGTAATCATGGTAAACAC | + |
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Preference number: 5 (lower is better) Translates to: SSGTHIFPWERNTME*TSVTDSKNSNHGKH Trigger: GTGTTTACCATGATTACTGTTCTTACTATCAGTAACACTTGTCCACTCCATCGTGTTCCTCTCCCATGGGAAGATGTGGGTACCAGATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000570734.1 |
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| CDS CCA 90 bp | TTTGAAATCAGTCATTCTGGATCATCTGGTACCCACATCTTCCCATaGGAGAGGAACACGATGGAGTGGACAAGTGTTACTGATAGTAAG | + |
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Preference number: 5 (lower is better) Translates to: FEISHSGSSGTHIFP*ERNTMEWTSVTDSK Trigger: CTTACTATCAGTAACACTTGTCCACTCCATCGTGTTCCTCTCCCATGGGAAGATGTGGGTACCAGATGATCCAGAATGACTGATTTCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000570734.1 |
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| CDS TCA 90 bp | GAACACTCACCTCACGTACAGTACACATTGGTTGAAAACATGCATTaGCGAACGTGGTCCATGAATACCTTGGCCTATAGAATTGCATGT | + |
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Preference number: 5 (lower is better) Translates to: EHSPHVQYTLVENMH*RTWSMNTLAYRIAC Trigger: ACATGCAATTCTATAGGCCAAGGTATTCATGGACCACGTTCGTCAATGCATGTTTTCAACCAATGTGTACTGTACGTGAGGTGAGTGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000570734.1 ENST00000572813.1 |
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| CDS TCA 90 bp | TACAGTACACATTGGTTGAAAACATGCATTGACGAACGTGGTCCATaGATACCTTGGCCTATAGAATTGCATGTTTGTTTTGAGACAGGG | + |
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Preference number: 5 (lower is better) Translates to: YSTHWLKTCIDERGP*IPWPIELHVCFETG Trigger: CCCTGTCTCAAAACAAACATGCAATTCTATAGGCCAAGGTATTCATGGACCACGTTCGTCAATGCATGTTTTCAACCAATGTGTACTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000570734.1 ENST00000572813.1 |
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| CDS GCA 72 bp | CGGCGCCGGGGCCGCCGAAGGCCCGCAGGGTCGCGGTaGGCAGCTCGGCGCGCAGCAGCTGCTCCATGGAGT | + |
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Preference number: 6 (lower is better) Translates to: RRRGRRRPAGSR*AARRAAAAPWS Trigger: ACTCCATGGAGCAGCTGCTGCGCGCCGAGCTGCGCACCGCGACCCTGCGGGCCTTCGGCGGCCCCGGCGCCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000300784.8 ENST00000574496.5 |
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| CDS TCA 72 bp | CTGGGCCTGCGTCCGTGTCGTAGGCTCGGCCCTCGCTaGTGCAGCCGGCGCCGGGGCCGCCGAAGGCCCGCA | + |
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Preference number: 6 (lower is better) Translates to: LGLRPCRRLGPR*CSRRRGRRRPA Trigger: TGCGGGCCTTCGGCGGCCCCGGCGCCGGCTGCATCAGCGAGGGCCGAGCCTACGACACGGACGCAGGCCCAG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000300784.8 ENST00000574496.5 |
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| CDS GCA 72 bp | CCAGAGCTGGACCCCCGGGCTACCCACCTTCCTTGCTaGCTCTTAGGGTGGGGCAGCCACAGCAGAGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: PELDPRATHLPC*LLGWGSHSRGL Trigger: GAGGCCTCTGCTGTGGCTGCCCCACCCTAAGAGGCAGCAAGGAAGGTGGGTAGCCCGGGGGTCCAGCTCTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000570734.1 |
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| CDS TCA 72 bp | GTTCTCGTGCCTCTCGGTCAGCATAGTCCTTCTCAATaGGGTCCAGCTGCGCCTGGAGCCGGTGCCGGGCGA | + |
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Preference number: 6 (lower is better) Translates to: VLVPLGQHSPSQ*GPAAPGAGAGR Trigger: TCGCCCGGCACCGGCTCCAGGCGCAGCTGGACCTCATTGAGAAGGACTATGCTGACCGAGAGGCACGAGAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000300784.8 ENST00000570734.1 |
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| CDS GCA 72 bp | TCCTTCTCAATGAGGTCCAGCTGCGCCTGGAGCCGGTaGCGGGCGAAAAAGGTCGGCCAGTCATCCTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: SFSMRSSCAWSR*RAKKVGQSSCH Trigger: GTGGCAGGATGACTGGCCGACCTTTTTCGCCCGGCACCGGCTCCAGGCGCAGCTGGACCTCATTGAGAAGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000300784.8 ENST00000570734.1 |
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| CDS CAA 90 bp | CTCTTAGGGTGGGGCAGCCACAGCAGAGGCCTCACTGGAGCTAACTaGGGCACACACGTCAGGCAGGGAAGAAGAGGGCTGGGCCCATCA | + |
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Preference number: 6 (lower is better) Translates to: LLGWGSHSRGLTGAN*GTHVRQGRRGLGPS Trigger: TGATGGGCCCAGCCCTCTTCTTCCCTGCCTGACGTGTGTGCCCAAGTTAGCTCCAGTGAGGCCTCTGCTGTGGCTGCCCCACCCTAAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570734.1 |
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| CDS GCA 72 bp | GAGAGGACCAGCTCTTTCCCAGAGAAGTCACTGCCGTaGCCACCTGTAGCCGGGACCAGAGTTCTCGTGCCT | + |
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Preference number: 6 (lower is better) Translates to: ERTSSFPEKSLP*PPVAGTRVLVP Trigger: AGGCACGAGAACTCTGGTCCCGGCTACAGGTGGGCACGGCAGTGACTTCTCTGGGAAAGAGCTGGTCCTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000570734.1 |
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| CDS GCA 72 bp | TGCTCCAGCTCCGTTTTACAGATGAACCCGCACAAATaGGGCGGGATCATGAGAGGACCAGCTCTTTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: CSSSVLQMNPHK*GGIMRGPALSQ Trigger: CTGGGAAAGAGCTGGTCCTCTCATGATCCCGCCGCATTTGTGCGGGTTCATCTGTAAAACGGAGCTGGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570734.1 |
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| CDS TCA 72 bp | GTTTCACATGAGGAAAGTCTGAGGCTAAATACCTGGTaGCCTAGCAGTGGAGAGGGGCACGAGGAGCCAAGT | + |
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Preference number: 6 (lower is better) Translates to: VSHEESLRLNTW*PSSGEGHEEPS Trigger: ACTTGGCTCCTCGTGCCCCTCTCCACTGCTAGGTCACCAGGTATTTAGCCTCAGACTTTCCTCATGTGAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570734.1 |
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| CDS CCA 72 bp | AGTCATTCTGGATCATCTGGTACCCACATCTTCCCATaGGAGAGGAACACGATGGAGTGGACAAGTGTTACT | + |
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Preference number: 6 (lower is better) Translates to: SHSGSSGTHIFP*ERNTMEWTSVT Trigger: AGTAACACTTGTCCACTCCATCGTGTTCCTCTCCCATGGGAAGATGTGGGTACCAGATGATCCAGAATGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000570734.1 |
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| CDS TCA 72 bp | CCTCACGTACAGTACACATTGGTTGAAAACATGCATTaGCGAACGTGGTCCATGAATACCTTGGCCTATAGA | + |
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Preference number: 6 (lower is better) Translates to: PHVQYTLVENMH*RTWSMNTLAYR Trigger: TCTATAGGCCAAGGTATTCATGGACCACGTTCGTCAATGCATGTTTTCAACCAATGTGTACTGTACGTGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000570734.1 ENST00000572813.1 |
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| CDS CCA 72 bp | ACCCACATCTTCCCATGGGAGAGGAACACGATGGAGTaGACAAGTGTTACTGATAGTAAGAACAGTAATCAT | + |
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Preference number: 6 (lower is better) Translates to: THIFPWERNTME*TSVTDSKNSNH Trigger: ATGATTACTGTTCTTACTATCAGTAACACTTGTCCACTCCATCGTGTTCCTCTCCCATGGGAAGATGTGGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000570734.1 |
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| CDS TCA 72 bp | CATTGGTTGAAAACATGCATTGACGAACGTGGTCCATaGATACCTTGGCCTATAGAATTGCATGTTTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: HWLKTCIDERGP*IPWPIELHVCF Trigger: AAAACAAACATGCAATTCTATAGGCCAAGGTATTCATGGACCACGTTCGTCAATGCATGTTTTCAACCAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000570734.1 ENST00000572813.1 |
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