RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FMOD (Homo sapiens)

Ensembl gene IDs: ENSG00000122176

Ensembl transcript IDs: ENST00000354955.5, ENST00000461936.1, ENST00000493296.1, ENST00000647586.1

Found 465 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGAGATGTGAAAGCAGAGGGTTGTATGCCCAGCACAGGCAAGATTTaGCTGCCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTAC +
Preference number: 1 (lower is better)
Translates to: RDVKAEGCMPSTGKI*LPGLGFTDPSQSWY
Trigger: GTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGGCAGCCAAATCTTGCCTGTGCTGGGCATACAACCCTCTGCTTTCACATCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR GCA 90 bp GCCTATACTTGGGCTAACTCTCCTCCAACAGTCCTTGCCCCTGACTaGCCAGATGGCTTTGTCCCAACCTTGCCCAAAGGGCAGGTGGGT +
Preference number: 1 (lower is better)
Translates to: AYTWANSPPTVLAPD*PDGFVPTLPKGQVG
Trigger: ACCCACCTGCCCTTTGGGCAAGGTTGGGACAAAGCCATCTGGGCAGTCAGGGGCAAGGACTGTTGGAGGAGAGTTAGCCCAAGTATAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CCA 90 bp GTGTGGGTTGTCTCCACAGGTTGCTGGGCAGATGCTCACATGCCTTaGGGTCTCCTGACTCTGCTTAAGGCACAGAAGAGGCATCTGTGG +
Preference number: 1 (lower is better)
Translates to: VWVVSTGCWADAHMP*GLLTLLKAQKRHLW
Trigger: CCACAGATGCCTCTTCTGTGCCTTAAGCAGAGTCAGGAGACCCCAAGGCATGTGAGCATCTGCCCAGCAACCTGTGGAGACAACCCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CCA 90 bp GAAAGCAGAGGGTTGTATGCCCAGCACAGGCAAGATTTGGCTGCCTaGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAAC +
Preference number: 1 (lower is better)
Translates to: ESRGLYAQHRQDLAA*PGLHGPQPELVLFN
Trigger: GTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGGCAGCCAAATCTTGCCTGTGCTGGGCATACAACCCTCTGCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR TCA 90 bp TCTCCACAGGTTGCTGGGCAGATGCTCACATGCCTTGGGGTCTCCTaGCTCTGCTTAAGGCACAGAAGAGGCATCTGTGGAGGAAAGTGG +
Preference number: 1 (lower is better)
Translates to: SPQVAGQMLTCLGVS*LCLRHRRGICGGKW
Trigger: CCACTTTCCTCCACAGATGCCTCTTCTGTGCCTTAAGCAGAGTCAGGAGACCCCAAGGCATGTGAGCATCTGCCCAGCAACCTGTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CCA 90 bp GTCCTTTCACCCTCAGACACAGTGTGGGTTGTCTCCACAGGTTGCTaGGCAGATGCTCACATGCCTTGGGGTCTCCTGACTCTGCTTAAG +
Preference number: 1 (lower is better)
Translates to: VLSPSDTVWVVSTGC*ADAHMPWGLLTLLK
Trigger: CTTAAGCAGAGTCAGGAGACCCCAAGGCATGTGAGCATCTGCCCAGCAACCTGTGGAGACAACCCACACTGTGTCTGAGGGTGAAAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CCA 90 bp GGTGGCTTTCCAGGGGTGAGGTTAGGGAGGTATAGAAGTGACTCCTaGTGTCCTTTCACCCTCAGACACAGTGTGGGTTGTCTCCACAGG +
Preference number: 1 (lower is better)
Translates to: GGFPGVRLGRYRSDS*CPFTLRHSVGCLHR
Trigger: CCTGTGGAGACAACCCACACTGTGTCTGAGGGTGAAAGGACACCAGGAGTCACTTCTATACCTCCCTAACCTCACCCCTGGAAAGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CCA 90 bp GTTGGAACATCCAGGGATCCTTCCATCTACCACCACTTCTGTCCCTaGAAAAGAGTGAGCTTCTGCCTATGTCCTCAGCAGAAGGCTGCC +
Preference number: 1 (lower is better)
Translates to: VGTSRDPSIYHHFCP*KRVSFCLCPQQKAA
Trigger: GGCAGCCTTCTGCTGAGGACATAGGCAGAAGCTCACTCTTTTCCAGGGACAGAAGTGGTGGTAGATGGAAGGATCCCTGGATGTTCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CCA 90 bp CAGAAGAGGCAGCTGGGCAAGAGGTATATTTTGAGAAGCAACAAATaGGAGCCCAGAGTAACTGCACGACCAGCCCAGCACAGAGGGAGA +
Preference number: 1 (lower is better)
Translates to: QKRQLGKRYILRSNK*EPRVTARPAQHRGR
Trigger: TCTCCCTCTGTGCTGGGCTGGTCGTGCAGTTACTCTGGGCTCCCATTTGTTGCTTCTCAAAATATACCTCTTGCCCAGCTGCCTCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CCA 90 bp GGGCAGCCTTGCCCCTCACATCGGAGCTCCTTTGTTGAAATGAGCTaGTTTGGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGT +
Preference number: 1 (lower is better)
Translates to: GQPCPSHRSSFVEMS*FGFCGFQVWSQERS
Trigger: ACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCCAAACCAGCTCATTTCAACAAAGGAGCTCCGATGTGAGGGGCAAGGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR GCA 90 bp CAAGAGGTATATTTTGAGAAGCAACAAATGGGAGCCCAGAGTAACTaGACGACCAGCCCAGCACAGAGGGAGAGCTGTCAAGTGCTGCTC +
Preference number: 1 (lower is better)
Translates to: QEVYFEKQQMGAQSN*TTSPAQRESCQVLL
Trigger: GAGCAGCACTTGACAGCTCTCCCTCTGTGCTGGGCTGGTCGTGCAGTTACTCTGGGCTCCCATTTGTTGCTTCTCAAAATATACCTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR TCA 90 bp CCTTCTCAGGGAAGGTGCTTCAAAGCATACACAGTATCAGGGATGTaGTGGCATCTGGGCAGAGCCTATACTTGGGCTAACTCTCCTCCA +
Preference number: 1 (lower is better)
Translates to: PSQGRCFKAYTVSGM*WHLGRAYTWANSPP
Trigger: TGGAGGAGAGTTAGCCCAAGTATAGGCTCTGCCCAGATGCCATCACATCCCTGATACTGTGTATGCTTTGAAGCACCTTCCCTGAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR GCA 90 bp TTTCCTGTAATAAGGATCCTTTATAAAGGCATGATGGTGTTCACATaGAGATGCTTTCTGAAGAGCCCTGGGGCAGGGGGCAGCCTTGCC +
Preference number: 1 (lower is better)
Translates to: FPVIRILYKGMMVFT*RCFLKSPGAGGSLA
Trigger: GGCAAGGCTGCCCCCTGCCCCAGGGCTCTTCAGAAAGCATCTGCATGTGAACACCATCATGCCTTTATAAAGGATCCTTATTACAGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CCA 90 bp TACAGGAAAGAAGACTACAGAGGGTGCCCGTGGACTTCTGTCACATaGTCCATCCTGGACCTTCCAGCAAAAGCCAAACCAAACCATCAA +
Preference number: 1 (lower is better)
Translates to: YRKEDYRGCPWTSVT*SILDLPAKAKPNHQ
Trigger: TTGATGGTTTGGTTTGGCTTTTGCTGGAAGGTCCAGGATGGACCATGTGACAGAAGTCCACGGGCACCCTCTGTAGTCTTCTTTCCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CCA 90 bp ACTCTGCTTAAGGCACAGAAGAGGCATCTGTGGAGGAAAGTGGAGTaGGTGAAGTGGATTTCAGAAGAGGCAGCTGGGCAAGAGGTATAT +
Preference number: 1 (lower is better)
Translates to: TLLKAQKRHLWRKVE*VKWISEEAAGQEVY
Trigger: ATATACCTCTTGCCCAGCTGCCTCTTCTGAAATCCACTTCACCCACTCCACTTTCCTCCACAGATGCCTCTTCTGTGCCTTAAGCAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CCA 90 bp GAAGGTGCTTCAAAGCATACACAGTATCAGGGATGTGATGGCATCTaGGCAGAGCCTATACTTGGGCTAACTCTCCTCCAACAGTCCTTG +
Preference number: 1 (lower is better)
Translates to: EGASKHTQYQGCDGI*AEPILGLTLLQQSL
Trigger: CAAGGACTGTTGGAGGAGAGTTAGCCCAAGTATAGGCTCTGCCCAGATGCCATCACATCCCTGATACTGTGTATGCTTTGAAGCACCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR TCA 90 bp CACCTTCAAAGAGCTACCCAGCTGCCAAAATATAGCCCTATACATTaGTCTAAGCCTGAGGTTGGCTGTCTCCTCCCACATCAGGTCATG +
Preference number: 1 (lower is better)
Translates to: HLQRATQLPKYSPIH*SKPEVGCLLPHQVM
Trigger: CATGACCTGATGTGGGAGGAGACAGCCAACCTCAGGCTTAGATCAATGTATAGGGCTATATTTTGGCAGCTGGGTAGCTCTTTGAAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR GCA 90 bp GTTTGGAATGCAGAAAGTGCTGGGCAAGAATGGAACTACTGGGGCTaGTTTCTCAACTCAGCCAATTTGAGGTGTGTTTGGCCCATTGCA +
Preference number: 1 (lower is better)
Translates to: VWNAESAGQEWNYWG*FLNSANLRCVWPIA
Trigger: TGCAATGGGCCAAACACACCTCAAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGCACTTTCTGCATTCCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CCA 90 bp AACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTGAGGTGTGTTTaGCCCATTGCAGATGCTGATGGTAAGCAAAGTCTGGCCTTTCCT +
Preference number: 1 (lower is better)
Translates to: NYWGCFLNSANLRCV*PIADADGKQSLAFP
Trigger: AGGAAAGGCCAGACTTTGCTTACCATCAGCATCTGCAATGGGCCAAACACACCTCAAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CCA 90 bp ATTAACCACATCCTCCTTCTTTGGGCTAGCAAGTCCAGGGCTGCCTaGAGTCTGTCTCTACCATCAGGATATAGAATCTTCCTGCTTGGA +
Preference number: 1 (lower is better)
Translates to: INHILLLWASKSRAA*SLSLPSGYRIFLLG
Trigger: TCCAAGCAGGAAGATTCTATATCCTGATGGTAGAGACAGACTCCAGGCAGCCCTGGACTTGCTAGCCCAAAGAAGGAGGATGTGGTTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CCA 90 bp TCCTTTGTTGAAATGAGCTGGTTTGGCTTTTGTGGATTCCAGGTCTaGAGCCAAGAACGTAGTCCAAAGATCCCCTCTTCCCTTCTCAGG +
Preference number: 1 (lower is better)
Translates to: SFVEMSWFGFCGFQV*SQERSPKIPSSLLR
Trigger: CCTGAGAAGGGAAGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCCAAACCAGCTCATTTCAACAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR GCA 90 bp TTGTGGATAAAAACCCAGGTAGGATGCTGTTTGGAATGCAGAAAGTaGTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGC +
Preference number: 1 (lower is better)
Translates to: LWIKTQVGCCLECRK*WARMELLGLLSQLS
Trigger: GCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGCACTTTCTGCATTCCAAACAGCATCCTACCTGGGTTTTTATCCACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR GCA 90 bp AAAACCATGTGGCCGCTACCTTTGTGGATAAAAACCCAGGTAGGATaGTGTTTGGAATGCAGAAAGTGCTGGGCAAGAATGGAACTACTG +
Preference number: 1 (lower is better)
Translates to: KTMWPLPLWIKTQVG*CLECRKCWARMELL
Trigger: CAGTAGTTCCATTCTTGCCCAGCACTTTCTGCATTCCAAACAGCATCCTACCTGGGTTTTTATCCACAAAGGTAGCGGCCACATGGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR TCA 90 bp AGCCAGAGCTGGTACTTTTTAACTATGGCCTTAGGACAAACCAGGTaGAACAGATTAACCACATCCTCCTTCTTTGGGCTAGCAAGTCCA +
Preference number: 1 (lower is better)
Translates to: SQSWYFLTMALGQTR*NRLTTSSFFGLASP
Trigger: TGGACTTGCTAGCCCAAAGAAGGAGGATGTGGTTAATCTGTTTCACCTGGTTTGTCCTAAGGCCATAGTTAAAAAGTACCAGCTCTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR GCA 90 bp CTTTCCTCTTCTGAAGTCTTATCCACCTTCAAAGAGCTACCCAGCTaGCAAAATATAGCCCTATACATTGATCTAAGCCTGAGGTTGGCT +
Preference number: 1 (lower is better)
Translates to: LSSSEVLSTFKELPS*QNIALYIDLSLRLA
Trigger: AGCCAACCTCAGGCTTAGATCAATGTATAGGGCTATATTTTGGCAGCTGGGTAGCTCTTTGAAGGTGGATAAGACTTCAGAAGAGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CCA 90 bp AACTGTGTTTCTCATACTTTAAAAACCATGTGGCCGCTACCTTTGTaGATAAAAACCCAGGTAGGATGCTGTTTGGAATGCAGAAAGTGC +
Preference number: 1 (lower is better)
Translates to: NCVSHTLKTMWPLPL*IKTQVGCCLECRKC
Trigger: GCACTTTCTGCATTCCAAACAGCATCCTACCTGGGTTTTTATCCACAAAGGTAGCGGCCACATGGTTTTTAAAGTATGAGAAACACAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR TCA 90 bp AAAGTATGGTTATATACTATTGCCCATGCCACTTTTGAAGTTCCATaGCCTCAGATCATTGGGAAGAACTTAAGAGCCGTGAGATTTATG +
Preference number: 1 (lower is better)
Translates to: KVWLYTIAHATFEVP*PQIIGKNLRAVRFM
Trigger: CATAAATCTCACGGCTCTTAAGTTCTTCCCAATGATCTGAGGTCATGGAACTTCAAAAGTGGCATGGGCAATAGTATATAACCATACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CAA 90 bp CAGAGATGTGAAAGCAGAGGGTTGTATGCCCAGCACAGGCAAGATTaGGCTGCCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTA +
Preference number: 2 (lower is better)
Translates to: QRCESRGLYAQHRQD*AAWPGLHGPQPELV
Trigger: TACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGGCAGCCAAATCTTGCCTGTGCTGGGCATACAACCCTCTGCTTTCACATCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR GCA 90 bp GCTGCCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATAACCATCAAGCCAAATaGCACGGGGGCTCTCCGCCC +
Preference number: 2 (lower is better)
Translates to: AAWPGLHGPQPELVLFNYNHQAK*HGGSPP
Trigger: GGGCGGAGAGCCCCCGTGGCATTTGGCTTGATGGTT...ATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR GCA 90 bp GCTCACATGCCTTGGGGTCTCCTGACTCTGCTTAAGGCACAGAAGAGGCATCTGGGAGCCCAGAGTAACTaGACGACCAGCCCAGCACAG +
Preference number: 2 (lower is better)
Translates to: AHMPWGLLTLLKAQKRHLGAQSN*TTSPAQ
Trigger: CTGTGCTGGGCTGGTCGTGCAGTTACTCTGGGCTCC...CAGATGCCTCTTCTGTGCCTTAAGCAGAGTCAGGAGACCCCAAGGCATGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR GCA 90 bp CCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGGCCAGAGCTGTCAAGTGCTaGTCACAGACAGCCAGGGAT +
Preference number: 2 (lower is better)
Translates to: PGLGFTDPSQSWYFLTMARAVKC*SQTARD
Trigger: ATCCCTGGCTGTCTGTGAGCAGCACTTGACAGCTCT...GGCCATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CAA 90 bp ATCTGGGCAGAGCCTATACTTGGGCTAACTCTCCTCCAACAGTCCTaGCCCCTGACTGCCCAGATGGCTTTGTCCCAACCTTGCCCAAAG +
Preference number: 2 (lower is better)
Translates to: IWAEPILGLTLLQQS*PLTAQMALSQPCPK
Trigger: CTTTGGGCAAGGTTGGGACAAAGCCATCTGGGCAGTCAGGGGCAAGGACTGTTGGAGGAGAGTTAGCCCAAGTATAGGCTCTGCCCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR GCA 90 bp GCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTGAGGAACCATCAAGCCAAATaGCACGGGGGCTCTCCGCCC +
Preference number: 2 (lower is better)
Translates to: AGQEWNYWGCFLNSANLRNHQAK*HGGSPP
Trigger: GGGCGGAGAGCCCCCGTGGCATTTGGCTTGATGGTT...CCTCAAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR GCA 90 bp GTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTTCCCTTCGGGAGAGCTGTCAAGTaGTGCTCACAGACAGCCAGG +
Preference number: 2 (lower is better)
Translates to: VDSRSGAKNVVQRSPLPFGRAVK*CSQTAR
Trigger: CCTGGCTGTCTGTGAGCAGCACTTGACAGCTCTCCC...GAAGGGAAGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR GCA 90 bp AGAGCCTATACTTGGGCTAACTCTCCTCCAACAGTCCTTGCCCCTGACTGCCCAAGGTTGCTGGGCAGATaGTCACATGCCTTGGGGTCT +
Preference number: 2 (lower is better)
Translates to: RAYTWANSPPTVLAPDCPRLLGR*SHALGS
Trigger: AGACCCCAAGGCATGTGAGCATCTGCCCAGCAACCT...TGGGCAGTCAGGGGCAAGGACTGTTGGAGGAGAGTTAGCCCAAGTATAGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CCA 90 bp AGAGCCTATACTTGGGCTAACTCTCCTCCAACAGTCCTTGCCCCTGACTGCCCACCCTCAGACACAGTGTaGGTTGTCTCCACAGGTTGC +
Preference number: 2 (lower is better)
Translates to: RAYTWANSPPTVLAPDCPPSDTV*VVSTGC
Trigger: GCAACCTGTGGAGACAACCCACACTGTGTCTGAGGG...TGGGCAGTCAGGGGCAAGGACTGTTGGAGGAGAGTTAGCCCAAGTATAGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CCA 90 bp GGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTCAAGATTTGGCTGCCTaGCCTGGGCTTCACGGACCC +
Preference number: 2 (lower is better)
Translates to: GFCGFQVWSQERSPKIPSQDLAA*PGLHGP
Trigger: GGGTCCGTGAAGCCCAGGCCAGGCAGCCAAATCTTG...AGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR GCA 90 bp AGAGCCTATACTTGGGCTAACTCTCCTCCAACAGTCCTTGCCCCTGACTGCCCAGAAGACTACAGAGGGTaGCCGTGGACTTCTGTCACA +
Preference number: 2 (lower is better)
Translates to: RAYTWANSPPTVLAPDCPEDYRG*PWTSVT
Trigger: TGTGACAGAAGTCCACGGGCACCCTCTGTAGTCTTC...TGGGCAGTCAGGGGCAAGGACTGTTGGAGGAGAGTTAGCCCAAGTATAGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR GCA 90 bp GAAATGAGCTGGTTTGGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTTCCTCAGCAGAAGGCTaGCTGTCCCTGATCGCCCCC +
Preference number: 2 (lower is better)
Translates to: EMSWFGFCGFQVWSQERSSSAEG*LSLIAP
Trigger: GGGGGCGATCAGGGACAGGCAGCCTTCTGCTGAGGA...ACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCCAAACCAGCTCATTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR GCA 90 bp GCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTGAGGGGGAGAGCTGTCAAGTaGTGCTCACAGACAGCCAGG +
Preference number: 2 (lower is better)
Translates to: AGQEWNYWGCFLNSANLRGRAVK*CSQTAR
Trigger: CCTGGCTGTCTGTGAGCAGCACTTGACAGCTCTCCC...CCTCAAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR GCA 90 bp CCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGGCCTGGAACTACTGGGGCTaGTTTCTCAACTCAGCCAAT +
Preference number: 2 (lower is better)
Translates to: PGLGFTDPSQSWYFLTMAWNYWG*FLNSAN
Trigger: ATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCA...GGCCATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CCA 90 bp GGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGGCCTTACAGAAGAGGCATCTGTaGAGGAAAGTGGAGTGGGTG +
Preference number: 2 (lower is better)
Translates to: GLGFTDPSQSWYFLTMALQKRHL*RKVEWV
Trigger: CACCCACTCCACTTTCCTCCACAGATGCCTCTTCTG...TAAGGCCATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CCA 90 bp TATACTTGGGCTAACTCTCCTCCAACAGTCCTTGCCCCTGACTGCCCAGATGGCAAGTCCAGGGCTGCCTaGAGTCTGTCTCTACCATCA +
Preference number: 2 (lower is better)
Translates to: YTWANSPPTVLAPDCPDGKSRAA*SLSLPS
Trigger: TGATGGTAGAGACAGACTCCAGGCAGCCCTGGACTT...GCCATCTGGGCAGTCAGGGGCAAGGACTGTTGGAGGAGAGTTAGCCCAAGTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CCA 90 bp GGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTAGCACAGGCAAGATTTaGCTGCCTGGCCTGGGCTTC +
Preference number: 2 (lower is better)
Translates to: GFCGFQVWSQERSPKIPSSTGKI*LPGLGF
Trigger: GAAGCCCAGGCCAGGCAGCCAAATCTTGCCTGTGCT...AGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR TCA 90 bp GCTGCCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATTGCCCATGCCACTTTTaGAGTTCCATGACCTCAGAT +
Preference number: 2 (lower is better)
Translates to: AAWPGLHGPQPELVLFNYCPCHF*SSMTSD
Trigger: ATCTGAGGTCATGGAACTTCAAAAGTGGCATGGGCA...ATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR TCA 90 bp GCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTGAGGTGCCTTGGGGTCTCCTaGCTCTGCTTAAGGCACAGA +
Preference number: 2 (lower is better)
Translates to: AGQEWNYWGCFLNSANLRCLGVS*LCLRHR
Trigger: TCTGTGCCTTAAGCAGAGTCAGGAGACCCCAAGGCA...CCTCAAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR GCA 90 bp ATAGCTCAGAGATGTGAAAGCAGAGGGTTGTATGCCCAGCACAGGCAAGATTTGGGAGCCCAGAGTAACTaGACGACCAGCCCAGCACAG +
Preference number: 2 (lower is better)
Translates to: IAQRCESRGLYAQHRQDLGAQSN*TTSPAQ
Trigger: CTGTGCTGGGCTGGTCGTGCAGTTACTCTGGGCTCC...CAAATCTTGCCTGTGCTGGGCATACAACCCTCTGCTTTCACATCTCTGAGCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CCA 90 bp GCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTGAGGTACAGAGGGTGCCCGTaGACTTCTGTCACATGGTCC +
Preference number: 2 (lower is better)
Translates to: AGQEWNYWGCFLNSANLRYRGCP*TSVTWS
Trigger: GGACCATGTGACAGAAGTCCACGGGCACCCTCTGTA...CCTCAAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CCA 90 bp GCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTGAGGGATGCTCACATGCCTTaGGGTCTCCTGACTCTGCTT +
Preference number: 2 (lower is better)
Translates to: AGQEWNYWGCFLNSANLRDAHMP*GLLTLL
Trigger: AAGCAGAGTCAGGAGACCCCAAGGCATGTGAGCATC...CCTCAAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CCA 90 bp CTGCCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGTATAGAAGTGACTCCTaGTGTCCTTTCACCCTCAGA +
Preference number: 2 (lower is better)
Translates to: LPGLGFTDPSQSWYFLTMYRSDS*CPFTLR
Trigger: TCTGAGGGTGAAAGGACACCAGGAGTCACTTCTATA...CATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CCA 90 bp GTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTTCCCTTCAGTGCTGGGCAAGAATaGAACTACTGGGGCTGCTTT +
Preference number: 2 (lower is better)
Translates to: VDSRSGAKNVVQRSPLPFSAGQE*NYWGCF
Trigger: AAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGCACT...GAAGGGAAGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CAA 90 bp ACCTTCACTAATGAGGATATAGCTCAGAGATGTGAAAGCAGAGGGTaGTATGCCCAGCACAGGCAAGATTTGGCTGCCTGGCCTGGGCTT +
Preference number: 2 (lower is better)
Translates to: TFTNEDIAQRCESRG*YAQHRQDLAAWPGL
Trigger: AAGCCCAGGCCAGGCAGCCAAATCTTGCCTGTGCTGGGCATACAACCCTCTGCTTTCACATCTCTGAGCTATATCCTCATTAGTGAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR GCA 90 bp AGGTGTGTTTGGCCCATTGCAGATGCTGATGGTAAGCAAAGTCTGGCCTTTCCTGAAGACTACAGAGGGTaGCCGTGGACTTCTGTCACA +
Preference number: 2 (lower is better)
Translates to: RCVWPIADADGKQSLAFPEDYRG*PWTSVT
Trigger: TGTGACAGAAGTCCACGGGCACCCTCTGTAGTCTTC...AGGAAAGGCCAGACTTTGCTTACCATCAGCATCTGCAATGGGCCAAACACACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR GCA 90 bp TTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTTCCAGAGCTGTCAAGTGCTaGTCACAGACAGCCAGGGAT +
Preference number: 2 (lower is better)
Translates to: FCGFQVWSQERSPKIPSSRAVKC*SQTARD
Trigger: ATCCCTGGCTGTCTGTGAGCAGCACTTGACAGCTCT...GGAAGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CCA 90 bp GCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTGAGGTGGACTTCTGTCACATaGTCCATCCTGGACCTTCCA +
Preference number: 2 (lower is better)
Translates to: AGQEWNYWGCFLNSANLRWTSVT*SILDLP
Trigger: TGGAAGGTCCAGGATGGACCATGTGACAGAAGTCCA...CCTCAAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CCA 90 bp GAAATGAGCTGGTTTGGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTTACAGAGGGTGCCCGTaGACTTCTGTCACATGGTCC +
Preference number: 2 (lower is better)
Translates to: EMSWFGFCGFQVWSQERSYRGCP*TSVTWS
Trigger: GGACCATGTGACAGAAGTCCACGGGCACCCTCTGTA...ACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCCAAACCAGCTCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CCA 90 bp GAAATGAGCTGGTTTGGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTGTCTCCACAGGTTGCTaGGCAGATGCTCACATGCCT +
Preference number: 2 (lower is better)
Translates to: EMSWFGFCGFQVWSQERSVSTGC*ADAHMP
Trigger: AGGCATGTGAGCATCTGCCCAGCAACCTGTGGAGAC...ACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCCAAACCAGCTCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CCA 90 bp ATAGCTCAGAGATGTGAAAGCAGAGGGTTGTATGCCCAGCACAGGCAAGATTTGGTCTCCACAGGTTGCTaGGCAGATGCTCACATGCCT +
Preference number: 2 (lower is better)
Translates to: IAQRCESRGLYAQHRQDLVSTGC*ADAHMP
Trigger: AGGCATGTGAGCATCTGCCCAGCAACCTGTGGAGAC...CAAATCTTGCCTGTGCTGGGCATACAACCCTCTGCTTTCACATCTCTGAGCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CAA 90 bp ATGTGGCCGCTACCTTTGTGGATAAAAACCCAGGTAGGATGCTGTTaGGAATGCAGAAAGTGCTGGGCAAGAATGGAACTACTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: MWPLPLWIKTQVGCC*ECRKCWARMELLGL
Trigger: CAGCCCCAGTAGTTCCATTCTTGCCCAGCACTTTCTGCATTCCAAACAGCATCCTACCTGGGTTTTTATCCACAAAGGTAGCGGCCACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR GCA 90 bp GCTTCAAAGCATACACAGTATCAGGGATGTGATGGCATCTGGGCAGAGCCTATAGTTGTCTCCACAGGTTaGTGGGCAGATGCTCACATG +
Preference number: 2 (lower is better)
Translates to: ASKHTQYQGCDGIWAEPIVVSTG*WADAHM
Trigger: CATGTGAGCATCTGCCCAGCAACCTGTGGAGACAAC...TATAGGCTCTGCCCAGATGCCATCACATCCCTGATACTGTGTATGCTTTGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR GCA 90 bp TATACTTGGGCTAACTCTCCTCCAACAGTCCTTGCCCCTGACTGCCCAGATGGCAAAGAGCTACCCAGCTaGCAAAATATAGCCCTATAC +
Preference number: 2 (lower is better)
Translates to: YTWANSPPTVLAPDCPDGKELPS*QNIALY
Trigger: GTATAGGGCTATATTTTGGCAGCTGGGTAGCTCTTT...GCCATCTGGGCAGTCAGGGGCAAGGACTGTTGGAGGAGAGTTAGCCCAAGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR GCA 90 bp GGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGGCCTTAAAAACCCAGGTAGGATaGTGTTTGGAATGCAGAAAG +
Preference number: 2 (lower is better)
Translates to: GLGFTDPSQSWYFLTMALKTQVG*CLECRK
Trigger: CTTTCTGCATTCCAAACAGCATCCTACCTGGGTTTT...TAAGGCCATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CAA 90 bp CCTCAGATCATTGGGAAGAACTTAAGAGCCGTGAGATTTATGGGGTaGGAACATCCAGGGATCCTTCCATCTACCACCACTTCTGTCCCT +
Preference number: 2 (lower is better)
Translates to: PQIIGKNLRAVRFMG*EHPGILPSTTTSVP
Trigger: AGGGACAGAAGTGGTGGTAGATGGAAGGATCCCTGGATGTTCCAACCCCATAAATCTCACGGCTCTTAAGTTCTTCCCAATGATCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CAA 90 bp GGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTaGAGGTGTGTTTGGCCCATTGCAGATGCTGATGGTAAGCAAAGT +
Preference number: 2 (lower is better)
Translates to: GQEWNYWGCFLNSAN*RCVWPIADADGKQS
Trigger: ACTTTGCTTACCATCAGCATCTGCAATGGGCCAAACACACCTCAAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR TCA 90 bp TTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTTCCTGCCCATGCCACTTTTaGAGTTCCATGACCTCAGAT +
Preference number: 2 (lower is better)
Translates to: FCGFQVWSQERSPKIPSSCPCHF*SSMTSD
Trigger: ATCTGAGGTCATGGAACTTCAAAAGTGGCATGGGCA...GGAAGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CCA 90 bp GCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTGAGGTGGAGGAAAGTGGAGTaGGTGAAGTGGATTTCAGAA +
Preference number: 2 (lower is better)
Translates to: AGQEWNYWGCFLNSANLRWRKVE*VKWISE
Trigger: TTCTGAAATCCACTTCACCCACTCCACTTTCCTCCA...CCTCAAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CCA 90 bp GGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTCAAGAATGGAACTACTaGGGCTGCTTTCTCAACTCA +
Preference number: 2 (lower is better)
Translates to: GFCGFQVWSQERSPKIPSQEWNY*GCFLNS
Trigger: TGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTG...AGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CCA 90 bp GAAATGAGCTGGTTTGGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTAGTGCTGGGCAAGAATaGAACTACTGGGGCTGCTTT +
Preference number: 2 (lower is better)
Translates to: EMSWFGFCGFQVWSQERSSAGQE*NYWGCF
Trigger: AAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGCACT...ACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCCAAACCAGCTCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR TCA 90 bp GGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTACTTTTGAAGTTCCATaGCCTCAGATCATTGGGAAG +
Preference number: 2 (lower is better)
Translates to: GFCGFQVWSQERSPKIPSTFEVP*PQIIGK
Trigger: CTTCCCAATGATCTGAGGTCATGGAACTTCAAAAGT...AGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR GCA 90 bp GGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGGCCTTAGATATAGAATCTTCCTaGTTGGATAAAAGGAGAGGA +
Preference number: 2 (lower is better)
Translates to: GLGFTDPSQSWYFLTMALDIESS*LDKRRG
Trigger: TCCTCTCCTTTTATCCAAGCAGGAAGATTCTATATC...TAAGGCCATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CCA 90 bp AGGTGTGTTTGGCCCATTGCAGATGCTGATGGTAAGCAAAGTCTGGCCTTTCCTTTGAGAAGCAACAAATaGGAGCCCAGAGTAACTGCA +
Preference number: 2 (lower is better)
Translates to: RCVWPIADADGKQSLAFPLRSNK*EPRVTA
Trigger: TGCAGTTACTCTGGGCTCCCATTTGTTGCTTCTCAA...AGGAAAGGCCAGACTTTGCTTACCATCAGCATCTGCAATGGGCCAAACACACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CCA 90 bp TGGAATGCAGAAAGTGCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTGGAGGAAAGTGGAGTaGGTGAAGTGGATTTCAGAA +
Preference number: 2 (lower is better)
Translates to: WNAESAGQEWNYWGCFLNWRKVE*VKWISE
Trigger: TTCTGAAATCCACTTCACCCACTCCACTTTCCTCCA...GTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGCACTTTCTGCATTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CCA 90 bp ATAGCTCAGAGATGTGAAAGCAGAGGGTTGTATGCCCAGCACAGGCAAGATTTGTGGCCGCTACCTTTGTaGATAAAAACCCAGGTAGGA +
Preference number: 2 (lower is better)
Translates to: IAQRCESRGLYAQHRQDLWPLPL*IKTQVG
Trigger: TCCTACCTGGGTTTTTATCCACAAAGGTAGCGGCCA...CAAATCTTGCCTGTGCTGGGCATACAACCCTCTGCTTTCACATCTCTGAGCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR TCA 90 bp GAAATGAGCTGGTTTGGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTTATAGCCCTATACATTaGTCTAAGCCTGAGGTTGGC +
Preference number: 2 (lower is better)
Translates to: EMSWFGFCGFQVWSQERSYSPIH*SKPEVG
Trigger: GCCAACCTCAGGCTTAGATCAATGTATAGGGCTATA...ACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCCAAACCAGCTCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR GCA 90 bp AGGTGTGTTTGGCCCATTGCAGATGCTGATGGTAAGCAAAGTCTGGCCTTTCCTAAAGAGCTACCCAGCTaGCAAAATATAGCCCTATAC +
Preference number: 2 (lower is better)
Translates to: RCVWPIADADGKQSLAFPKELPS*QNIALY
Trigger: GTATAGGGCTATATTTTGGCAGCTGGGTAGCTCTTT...AGGAAAGGCCAGACTTTGCTTACCATCAGCATCTGCAATGGGCCAAACACACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CCA 90 bp AAGTGCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTTTGAGAAGCAACAAATaGGAGCCCAGAGTAACTGCA +
Preference number: 2 (lower is better)
Translates to: KCWARMELLGLLSQLSQFLRSNK*EPRVTA
Trigger: TGCAGTTACTCTGGGCTCCCATTTGTTGCTTCTCAA...AAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR TCA 90 bp AAGTGCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTTCCCACATCAGGTCATaGATATTATCATCATGCTGG +
Preference number: 2 (lower is better)
Translates to: KCWARMELLGLLSQLSQFSHIRS*ILSSCW
Trigger: CCAGCATGATGATAATATTCATGACCTGATGTGGGA...AAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR TCA 90 bp GCTTCAAAGCATACACAGTATCAGGGATGTGATGGCATCTGGGCAGAGCCTATATTAGGACAAACCAGGTaGAACAGATTAACCACATCC +
Preference number: 2 (lower is better)
Translates to: ASKHTQYQGCDGIWAEPILGQTR*NRLTTS
Trigger: GGATGTGGTTAATCTGTTTCACCTGGTTTGTCCTAA...TATAGGCTCTGCCCAGATGCCATCACATCCCTGATACTGTGTATGCTTTGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CAA 90 bp CTCACAGACAGCCAGGGATTGTTAGAAAAGTATGGTTATATACTATaGCCCATGCCACTTTTGAAGTTCCATGACCTCAGATCATTGGGA +
Preference number: 2 (lower is better)
Translates to: LTDSQGLLEKYGYIL*PMPLLKFHDLRSLG
Trigger: TCCCAATGATCTGAGGTCATGGAACTTCAAAAGTGGCATGGGCAATAGTATATAACCATACTTTTCTAACAATCCCTGGCTGTCTGTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CAA 90 bp ACAAACTGTGTTTCTCATACTTTAAAAACCATGTGGCCGCTACCTTaGTGGATAAAAACCCAGGTAGGATGCTGTTTGGAATGCAGAAAG +
Preference number: 2 (lower is better)
Translates to: TNCVSHTLKTMWPLP*WIKTQVGCCLECRK
Trigger: CTTTCTGCATTCCAAACAGCATCCTACCTGGGTTTTTATCCACAAAGGTAGCGGCCACATGGTTTTTAAAGTATGAGAAACACAGTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR GCA 72 bp CAGAGGGTTGTATGCCCAGCACAGGCAAGATTTGGCTaGCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCT +
Preference number: 3 (lower is better)
Translates to: QRVVCPAQARFG*LAWASRTPARA
Trigger: AGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGGCAGCCAAATCTTGCCTGTGCTGGGCATACAACCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CCA 72 bp CCCTCAGACACAGTGTGGGTTGTCTCCACAGGTTGCTaGGCAGATGCTCACATGCCTTGGGGTCTCCTGACT +
Preference number: 3 (lower is better)
Translates to: PSDTVWVVSTGC*ADAHMPWGLLT
Trigger: AGTCAGGAGACCCCAAGGCATGTGAGCATCTGCCCAGCAACCTGTGGAGACAACCCACACTGTGTCTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CCA 72 bp GTGACTCCTGGTGTCCTTTCACCCTCAGACACAGTGTaGGTTGTCTCCACAGGTTGCTGGGCAGATGCTCAC +
Preference number: 3 (lower is better)
Translates to: VTPGVLSPSDTV*VVSTGCWADAH
Trigger: GTGAGCATCTGCCCAGCAACCTGTGGAGACAACCCACACTGTGTCTGAGGGTGAAAGGACACCAGGAGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CCA 72 bp CTGCCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTaGTACTTTTTAACTATGGCCTTAGGACAAACCAGG +
Preference number: 3 (lower is better)
Translates to: LPGLGFTDPSQS*YFLTMALGQTR
Trigger: CCTGGTTTGTCCTAAGGCCATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CAA 90 bp TATACTTGGGCTAACTCTCCTCCAACAGTCCTTGCCCCTGACTGCCCAGATGGCAGATGCTCACATGCCTaGGGGTCTCCTGACTCTGCT +
Preference number: 3 (lower is better)
Translates to: YTWANSPPTVLAPDCPDGRCSHA*GSPDSA
Trigger: AGCAGAGTCAGGAGACCCCAAGGCATGTGAGCATCT...GCCATCTGGGCAGTCAGGGGCAAGGACTGTTGGAGGAGAGTTAGCCCAAGTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CAA 90 bp GGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGGCCTTAGATCTAAGCCTGAGGTaGGCTGTCTCCTCCCACATC +
Preference number: 3 (lower is better)
Translates to: GLGFTDPSQSWYFLTMALDLSLR*AVSSHI
Trigger: GATGTGGGAGGAGACAGCCAACCTCAGGCTTAGATC...TAAGGCCATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CAA 90 bp GGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTCTCCTCCAACAGTCCTaGCCCCTGACTGCCCAGATG +
Preference number: 3 (lower is better)
Translates to: GFCGFQVWSQERSPKIPSLLQQS*PLTAQM
Trigger: CATCTGGGCAGTCAGGGGCAAGGACTGTTGGAGGAG...AGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CAA 90 bp GTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTTCCCTTCGGTTGTCTCCACAGGTaGCTGGGCAGATGCTCACAT +
Preference number: 3 (lower is better)
Translates to: VDSRSGAKNVVQRSPLPFGCLHR*LGRCSH
Trigger: ATGTGAGCATCTGCCCAGCAACCTGTGGAGACAACC...GAAGGGAAGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CAA 90 bp AGAGCCTATACTTGGGCTAACTCTCCTCCAACAGTCCTTGCCCCTGACTGCCCAGGTGTGTTTGGCCCATaGCAGATGCTGATGGTAAGC +
Preference number: 3 (lower is better)
Translates to: RAYTWANSPPTVLAPDCPGVFGP*QMLMVS
Trigger: GCTTACCATCAGCATCTGCAATGGGCCAAACACACC...TGGGCAGTCAGGGGCAAGGACTGTTGGAGGAGAGTTAGCCCAAGTATAGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CCA 72 bp GAAGACTACAGAGGGTGCCCGTGGACTTCTGTCACATaGTCCATCCTGGACCTTCCAGCAAAAGCCAAACCA +
Preference number: 3 (lower is better)
Translates to: EDYRGCPWTSVT*SILDLPAKAKP
Trigger: TGGTTTGGCTTTTGCTGGAAGGTCCAGGATGGACCATGTGACAGAAGTCCACGGGCACCCTCTGTAGTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CAA 90 bp TTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTTCCCAGACACAGTGTGGGTaGTCTCCACAGGTTGCTGGG +
Preference number: 3 (lower is better)
Translates to: FCGFQVWSQERSPKIPSSQTQCG*SPQVAG
Trigger: CCCAGCAACCTGTGGAGACAACCCACACTGTGTCTG...GGAAGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CAA 90 bp GCTGCCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATATGTGGCCGCTACCTTaGTGGATAAAAACCCAGGTA +
Preference number: 3 (lower is better)
Translates to: AAWPGLHGPQPELVLFNYMWPLP*WIKTQV
Trigger: TACCTGGGTTTTTATCCACAAAGGTAGCGGCCACAT...ATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CAA 90 bp CTGCCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGATGTGGCCGCTACCTTaGTGGATAAAAACCCAGGTA +
Preference number: 3 (lower is better)
Translates to: LPGLGFTDPSQSWYFLTMMWPLP*WIKTQV
Trigger: TACCTGGGTTTTTATCCACAAAGGTAGCGGCCACAT...CATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CCA 72 bp CAGCTGGGCAAGAGGTATATTTTGAGAAGCAACAAATaGGAGCCCAGAGTAACTGCACGACCAGCCCAGCAC +
Preference number: 3 (lower is better)
Translates to: QLGKRYILRSNK*EPRVTARPAQH
Trigger: GTGCTGGGCTGGTCGTGCAGTTACTCTGGGCTCCCATTTGTTGCTTCTCAAAATATACCTCTTGCCCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CCA 72 bp AAGGCACAGAAGAGGCATCTGTGGAGGAAAGTGGAGTaGGTGAAGTGGATTTCAGAAGAGGCAGCTGGGCAA +
Preference number: 3 (lower is better)
Translates to: KAQKRHLWRKVE*VKWISEEAAGQ
Trigger: TTGCCCAGCTGCCTCTTCTGAAATCCACTTCACCCACTCCACTTTCCTCCACAGATGCCTCTTCTGTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CAA 90 bp GCTCACATGCCTTGGGGTCTCCTGACTCTGCTTAAGGCACAGAAGAGGCATCTGGTGAGATTTATGGGGTaGGAACATCCAGGGATCCTT +
Preference number: 3 (lower is better)
Translates to: AHMPWGLLTLLKAQKRHLVRFMG*EHPGIL
Trigger: AAGGATCCCTGGATGTTCCAACCCCATAAATCTCAC...CAGATGCCTCTTCTGTGCCTTAAGCAGAGTCAGGAGACCCCAAGGCATGTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CAA 90 bp AGGTGTGTTTGGCCCATTGCAGATGCTGATGGTAAGCAAAGTCTGGCCTTTCCTAGATGCTCACATGCCTaGGGGTCTCCTGACTCTGCT +
Preference number: 3 (lower is better)
Translates to: RCVWPIADADGKQSLAFPRCSHA*GSPDSA
Trigger: AGCAGAGTCAGGAGACCCCAAGGCATGTGAGCATCT...AGGAAAGGCCAGACTTTGCTTACCATCAGCATCTGCAATGGGCCAAACACACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CAA 90 bp TGGAATGCAGAAAGTGCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACGGTTGTCTCCACAGGTaGCTGGGCAGATGCTCACAT +
Preference number: 3 (lower is better)
Translates to: WNAESAGQEWNYWGCFLNGCLHR*LGRCSH
Trigger: ATGTGAGCATCTGCCCAGCAACCTGTGGAGACAACC...GTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGCACTTTCTGCATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CAA 90 bp GCTTCAAAGCATACACAGTATCAGGGATGTGATGGCATCTGGGCAGAGCCTATACAGACACAGTGTGGGTaGTCTCCACAGGTTGCTGGG +
Preference number: 3 (lower is better)
Translates to: ASKHTQYQGCDGIWAEPIQTQCG*SPQVAG
Trigger: CCCAGCAACCTGTGGAGACAACCCACACTGTGTCTG...TATAGGCTCTGCCCAGATGCCATCACATCCCTGATACTGTGTATGCTTTGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CAA 90 bp AGGTGTGTTTGGCCCATTGCAGATGCTGATGGTAAGCAAAGTCTGGCCTTTCCTGATCTAAGCCTGAGGTaGGCTGTCTCCTCCCACATC +
Preference number: 3 (lower is better)
Translates to: RCVWPIADADGKQSLAFPDLSLR*AVSSHI
Trigger: GATGTGGGAGGAGACAGCCAACCTCAGGCTTAGATC...AGGAAAGGCCAGACTTTGCTTACCATCAGCATCTGCAATGGGCCAAACACACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR GCA 72 bp ATCCTTTATAAAGGCATGATGGTGTTCACATGCAGATaGTTTCTGAAGAGCCCTGGGGCAGGGGGCAGCCTT +
Preference number: 3 (lower is better)
Translates to: ILYKGMMVFTCR*FLKSPGAGGSL
Trigger: AAGGCTGCCCCCTGCCCCAGGGCTCTTCAGAAAGCATCTGCATGTGAACACCATCATGCCTTTATAAAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CCA 72 bp TGCCCCTCACATCGGAGCTCCTTTGTTGAAATGAGCTaGTTTGGCTTTTGTGGATTCCAGGTCTGGAGCCAA +
Preference number: 3 (lower is better)
Translates to: CPSHRSSFVEMS*FGFCGFQVWSQ
Trigger: TTGGCTCCAGACCTGGAATCCACAAAAGCCAAACCAGCTCATTTCAACAAAGGAGCTCCGATGTGAGGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CAA 90 bp GGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGGCCTTAGGCAAGAGGTATATTTaGAGAAGCAACAAATGGGAG +
Preference number: 3 (lower is better)
Translates to: GLGFTDPSQSWYFLTMALGKRYI*RSNKWE
Trigger: CTCCCATTTGTTGCTTCTCAAAATATACCTCTTGCC...TAAGGCCATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CAA 90 bp GAAATGAGCTGGTTTGGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTGGTGTGTTTGGCCCATaGCAGATGCTGATGGTAAGC +
Preference number: 3 (lower is better)
Translates to: EMSWFGFCGFQVWSQERSGVFGP*QMLMVS
Trigger: GCTTACCATCAGCATCTGCAATGGGCCAAACACACC...ACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCCAAACCAGCTCATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CAA 90 bp TTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTTCCCAGGTAGGATGCTGTTaGGAATGCAGAAAGTGCTGG +
Preference number: 3 (lower is better)
Translates to: FCGFQVWSQERSPKIPSSQVGCC*ECRKCW
Trigger: CCAGCACTTTCTGCATTCCAAACAGCATCCTACCTG...GGAAGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR TCA 72 bp GGAAGGTGCTTCAAAGCATACACAGTATCAGGGATGTaGTGGCATCTGGGCAGAGCCTATACTTGGGCTAAC +
Preference number: 3 (lower is better)
Translates to: GRCFKAYTVSGM*WHLGRAYTWAN
Trigger: GTTAGCCCAAGTATAGGCTCTGCCCAGATGCCATCACATCCCTGATACTGTGTATGCTTTGAAGCACCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR GCA 72 bp GCAGAAAGTGCTGGGCAAGAATGGAACTACTGGGGCTaGTTTCTCAACTCAGCCAATTTGAGGTGTGTTTGG +
Preference number: 3 (lower is better)
Translates to: AESAGQEWNYWG*FLNSANLRCVW
Trigger: CCAAACACACCTCAAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGCACTTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR GCA 72 bp ATAAGGATCCTTTATAAAGGCATGATGGTGTTCACATaGAGATGCTTTCTGAAGAGCCCTGGGGCAGGGGGC +
Preference number: 3 (lower is better)
Translates to: IRILYKGMMVFT*RCFLKSPGAGG
Trigger: GCCCCCTGCCCCAGGGCTCTTCAGAAAGCATCTGCATGTGAACACCATCATGCCTTTATAAAGGATCCTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CCA 72 bp ATCCTCCTTCTTTGGGCTAGCAAGTCCAGGGCTGCCTaGAGTCTGTCTCTACCATCAGGATATAGAATCTTC +
Preference number: 3 (lower is better)
Translates to: ILLLWASKSRAA*SLSLPSGYRIF
Trigger: GAAGATTCTATATCCTGATGGTAGAGACAGACTCCAGGCAGCCCTGGACTTGCTAGCCCAAAGAAGGAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CCA 72 bp GAAATGAGCTGGTTTGGCTTTTGTGGATTCCAGGTCTaGAGCCAAGAACGTAGTCCAAAGATCCCCTCTTCC +
Preference number: 3 (lower is better)
Translates to: EMSWFGFCGFQV*SQERSPKIPSS
Trigger: GGAAGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCCAAACCAGCTCATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CAA 90 bp AGGTGTGTTTGGCCCATTGCAGATGCTGATGGTAAGCAAAGTCTGGCCTTTCCTTTGCCCATGCCACTTTaGAAGTTCCATGACCTCAGA +
Preference number: 3 (lower is better)
Translates to: RCVWPIADADGKQSLAFPLPMPL*KFHDLR
Trigger: TCTGAGGTCATGGAACTTCAAAAGTGGCATGGGCAA...AGGAAAGGCCAGACTTTGCTTACCATCAGCATCTGCAATGGGCCAAACACACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CAA 90 bp TATACTTGGGCTAACTCTCCTCCAACAGTCCTTGCCCCTGACTGCCCAGATGGCATAGAATCTTCCTGCTaGGATAAAAGGAGAGGACAA +
Preference number: 3 (lower is better)
Translates to: YTWANSPPTVLAPDCPDGIESSC*DKRRGQ
Trigger: TTGTCCTCTCCTTTTATCCAAGCAGGAAGATTCTAT...GCCATCTGGGCAGTCAGGGGCAAGGACTGTTGGAGGAGAGTTAGCCCAAGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR TCA 72 bp AGAGCTACCCAGCTGCCAAAATATAGCCCTATACATTaGTCTAAGCCTGAGGTTGGCTGTCTCCTCCCACAT +
Preference number: 3 (lower is better)
Translates to: RATQLPKYSPIH*SKPEVGCLLPH
Trigger: ATGTGGGAGGAGACAGCCAACCTCAGGCTTAGATCAATGTATAGGGCTATATTTTGGCAGCTGGGTAGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR GCA 72 bp AAAACCCAGGTAGGATGCTGTTTGGAATGCAGAAAGTaGTGGGCAAGAATGGAACTACTGGGGCTGCTTTCT +
Preference number: 3 (lower is better)
Translates to: KTQVGCCLECRK*WARMELLGLLS
Trigger: AGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGCACTTTCTGCATTCCAAACAGCATCCTACCTGGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR GCA 72 bp TGGCCGCTACCTTTGTGGATAAAAACCCAGGTAGGATaGTGTTTGGAATGCAGAAAGTGCTGGGCAAGAATG +
Preference number: 3 (lower is better)
Translates to: WPLPLWIKTQVG*CLECRKCWARM
Trigger: CATTCTTGCCCAGCACTTTCTGCATTCCAAACAGCATCCTACCTGGGTTTTTATCCACAAAGGTAGCGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CCA 72 bp TCAAAGCATACACAGTATCAGGGATGTGATGGCATCTaGGCAGAGCCTATACTTGGGCTAACTCTCCTCCAA +
Preference number: 3 (lower is better)
Translates to: SKHTQYQGCDGI*AEPILGLTLLQ
Trigger: TTGGAGGAGAGTTAGCCCAAGTATAGGCTCTGCCCAGATGCCATCACATCCCTGATACTGTGTATGCTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CAA 90 bp AGAGCCTATACTTGGGCTAACTCTCCTCCAACAGTCCTTGCCCCTGACTGCCCATATGGTTATATACTATaGCCCATGCCACTTTTGAAG +
Preference number: 3 (lower is better)
Translates to: RAYTWANSPPTVLAPDCPYGYIL*PMPLLK
Trigger: CTTCAAAAGTGGCATGGGCAATAGTATATAACCATA...TGGGCAGTCAGGGGCAAGGACTGTTGGAGGAGAGTTAGCCCAAGTATAGGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CAA 90 bp CAAAGTCTGGCCTTTCCTCTTCTGAAGTCTTATCCACCTTCAAAGAGCTACCCATTGCCCATGCCACTTTaGAAGTTCCATGACCTCAGA +
Preference number: 3 (lower is better)
Translates to: QSLAFPLLKSYPPSKSYPLPMPL*KFHDLR
Trigger: TCTGAGGTCATGGAACTTCAAAAGTGGCATGGGCAA...TGGGTAGCTCTTTGAAGGTGGATAAGACTTCAGAAGAGGAAAGGCCAGACTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CAA 90 bp GAAATGAGCTGGTTTGGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTGGCAAGAGGTATATTTaGAGAAGCAACAAATGGGAG +
Preference number: 3 (lower is better)
Translates to: EMSWFGFCGFQVWSQERSGKRYI*RSNKWE
Trigger: CTCCCATTTGTTGCTTCTCAAAATATACCTCTTGCC...ACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCCAAACCAGCTCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR-3UTR CAA 90 bp GCTTCAAAGCATACACAGTATCAGGGATGTGATGGCATCTGGGCAGAGCCTATAACAGACAGCCAGGGATaGTTAGAAAAGTATGGTTAT +
Preference number: 3 (lower is better)
Translates to: ASKHTQYQGCDGIWAEPITDSQG*LEKYGY
Trigger: ATAACCATACTTTTCTAACAATCCCTGGCTGTCTGT...TATAGGCTCTGCCCAGATGCCATCACATCCCTGATACTGTGTATGCTTTGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CCA 72 bp TCTCATACTTTAAAAACCATGTGGCCGCTACCTTTGTaGATAAAAACCCAGGTAGGATGCTGTTTGGAATGC +
Preference number: 3 (lower is better)
Translates to: SHTLKTMWPLPL*IKTQVGCCLEC
Trigger: GCATTCCAAACAGCATCCTACCTGGGTTTTTATCCACAAAGGTAGCGGCCACATGGTTTTTAAAGTATGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR TCA 72 bp TTATATACTATTGCCCATGCCACTTTTGAAGTTCCATaGCCTCAGATCATTGGGAAGAACTTAAGAGCCGTG +
Preference number: 3 (lower is better)
Translates to: LYTIAHATFEVP*PQIIGKNLRAV
Trigger: CACGGCTCTTAAGTTCTTCCCAATGATCTGAGGTCATGGAACTTCAAAAGTGGCATGGGCAATAGTATATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR TCA 72 bp TGGTACTTTTTAACTATGGCCTTAGGACAAACCAGGTaGAACAGATTAACCACATCCTCCTTCTTTGGGCTA +
Preference number: 3 (lower is better)
Translates to: WYFLTMALGQTR*NRLTTSSFFGL
Trigger: TAGCCCAAAGAAGGAGGATGTGGTTAATCTGTTTCACCTGGTTTGTCCTAAGGCCATAGTTAAAAAGTACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CCA 72 bp GCTGCTCACAGACAGCCAGGGATTGTTAGAAAAGTATaGTTATATACTATTGCCCATGCCACTTTTGAAGTT +
Preference number: 3 (lower is better)
Translates to: AAHRQPGIVRKV*LYTIAHATFEV
Trigger: AACTTCAAAAGTGGCATGGGCAATAGTATATAACCATACTTTTCTAACAATCCCTGGCTGTCTGTGAGCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp AGCCAAACCAAACCATCAAGCCAAATGCCACGGGGGCTCTCCGCCCAGTACCCGGGCAGGGGGCAGCCTTaGCCCTCACATCGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SQTKPSSQMPRGLSAQYPGRGQP*PSHRSS
Trigger: GGAGCTCCGATGTGAGGGGCAAGGCTGCCCCCTGCC...CGGGTACTGGGCGGAGAGCCCCCGTGGCATTTGGCTTGATGGTTTGGTTTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp CCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGGCCCCGCCCAGTACCCGGTaGCAGGGCTGCTCAGATCTC +
Preference number: 4 (lower is better)
Translates to: PGLGFTDPSQSWYFLTMAPPSTR*QGCSDL
Trigger: GAGATCTGAGCAGCCCTGGCACCGGGTACTGGGCGG...GGCCATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp CATGATGGTGTTCACATGCAGATGCTTTCTGAAGAGCCCTGGGGCAGGGGGCAGGGCAGGGGGCAGCCTTaGCCCTCACATCGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: HDGVHMQMLSEEPWGRGQGRGQP*PSHRSS
Trigger: GGAGCTCCGATGTGAGGGGCAAGGCTGCCCCCTGCC...CTGCCCCCTGCCCCAGGGCTCTTCAGAAAGCATCTGCATGTGAACACCATCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp CCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGGCCCTGCTCAGATCTCGATaGGGCTGGCAAGGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: PGLGFTDPSQSWYFLTMALLRSR*GWQGAG
Trigger: GCCTGCGCCTTGCCAGCCTCATCGAGATCTGAGCAG...GGCCATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GCTCACATGCCTTGGGGTCTCCTGACTCTGCTTAAGGCACAGAAGAGGCATCTGGGGCAGTCGCACTCCTaGGGGCAGTCGCGGGGATCT +
Preference number: 4 (lower is better)
Translates to: AHMPWGLLTLLKAQKRHLGQSHS*GQSRGS
Trigger: AGATCCCCGCGACTGCCCCCAGGAGTGCGACTGCCC...CAGATGCCTCTTCTGTGCCTTAAGCAGAGTCAGGAGACCCCAAGGCATGTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp CTGCCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGGGAGGTACAAGGCCGTaGGGTTCTCCAGCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: LPGLGFTDPSQSWYFLTMGGTRP*GSPAPP
Trigger: TGGAGGGGCTGGAGAACCTCACGGCCTTGTACCTCC...CATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp TATACTTGGGCTAACTCTCCTCCAACAGTCCTTGCCCCTGACTGCCCAGATGGCGCATGGCGCTGCGCTTaGTCTCGTTCCCGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: YTWANSPPTVLAPDCPDGAWRCA*SRSRPG
Trigger: GCCTGGACGGGAACGAGATCAAGCGCAGCGCCATGC...GCCATCTGGGCAGTCAGGGGCAAGGACTGTTGGAGGAGAGTTAGCCCAAGTATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp GCTGCCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATTCCTCAGCAGAAGGCTaGCTGTCCCTGATCGCCCCC +
Preference number: 4 (lower is better)
Translates to: AAWPGLHGPQPELVLFNYSSAEG*LSLIAP
Trigger: GGGGGCGATCAGGGACAGGCAGCCTTCTGCTGAGGA...ATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGGCCTTACGTGGGGAAGTTGGGTaGGCAGTCGCACTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GLGFTDPSQSWYFLTMALRGEVG*AVALLG
Trigger: CCCCAGGAGTGCGACTGCCCACCCAACTTCCCCACG...TAAGGCCATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GCTGCCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATTGGCCGTGGGGAAGTTaGGTGGGCAGTCGCACTCCT +
Preference number: 4 (lower is better)
Translates to: AAWPGLHGPQPELVLFNYWPWGS*VGSRTP
Trigger: AGGAGTGCGACTGCCCACCCAACTTCCCCACGGCCA...ATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp GGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGGCCTTACTGCTCAGATCTCGATaGGGCTGGCAAGGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: GLGFTDPSQSWYFLTMALLLRSR*GWQGAG
Trigger: GCCTGCGCCTTGCCAGCCTCATCGAGATCTGAGCAG...TAAGGCCATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp CAACAAATGGGAGCCCAGAGTAACTGCACGACCAGCCCAGCACAGAGGGAGAGCTCCAGGCGCAGCACCTaGAGCTTGGAGAAGTTCACG +
Preference number: 4 (lower is better)
Translates to: QQMGAQSNCTTSPAQRESSRRST*SLEKFT
Trigger: CGTGAACTTCTCCAAGCTGCAGGTGCTGCGCCTGGA...GCTCTCCCTCTGTGCTGGGCTGGTCGTGCAGTTACTCTGGGCTCCCATTTGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp CATGATGGTGTTCACATGCAGATGCTTTCTGAAGAGCCCTGGGGCAGGGGGCAGACCCGGTGCCAGGGCTaGTCAGATCTCGATGAGGCT +
Preference number: 4 (lower is better)
Translates to: HDGVHMQMLSEEPWGRGQTRCQG*SDLDEA
Trigger: AGCCTCATCGAGATCTGAGCAGCCCTGGCACCGGGT...CTGCCCCCTGCCCCAGGGCTCTTCAGAAAGCATCTGCATGTGAACACCATCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp GCTCACATGCCTTGGGGTCTCCTGACTCTGCTTAAGGCACAGAAGAGGCATCTGTCCTCAGCAGAAGGCTaGCTGTCCCTGATCGCCCCC +
Preference number: 4 (lower is better)
Translates to: AHMPWGLLTLLKAQKRHLSSAEG*LSLIAP
Trigger: GGGGGCGATCAGGGACAGGCAGCCTTCTGCTGAGGA...CAGATGCCTCTTCTGTGCCTTAAGCAGAGTCAGGAGACCCCAAGGCATGTGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp CCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGGCCGGGAGAGCTGTCAAGTaGTGCTCACAGACAGCCAGG +
Preference number: 4 (lower is better)
Translates to: PGLGFTDPSQSWYFLTMAGRAVK*CSQTAR
Trigger: CCTGGCTGTCTGTGAGCAGCACTTGACAGCTCTCCC...GGCCATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp CCCTGGAAAAGAGTGAGCTTCTGCCTATGTCCTCAGCAGAAGGCTGCCTGTCCCGGAGCCCAGAGTAACTaGACGACCAGCCCAGCACAG +
Preference number: 4 (lower is better)
Translates to: PWKRVSFCLCPQQKAACPGAQSN*TTSPAQ
Trigger: CTGTGCTGGGCTGGTCGTGCAGTTACTCTGGGCTCC...GGGACAGGCAGCCTTCTGCTGAGGACATAGGCAGAAGCTCACTCTTTTCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp CCCTGGAAAAGAGTGAGCTTCTGCCTATGTCCTCAGCAGAAGGCTGCCTGTCCCCAGGCAAGATTTGGCTaGCTGGCCTGGGCTTCACGG +
Preference number: 4 (lower is better)
Translates to: PWKRVSFCLCPQQKAACPQARFG*LAWASR
Trigger: CCGTGAAGCCCAGGCCAGGCAGCCAAATCTTGCCTG...GGGACAGGCAGCCTTCTGCTGAGGACATAGGCAGAAGCTCACTCTTTTCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp AGAGCCTATACTTGGGCTAACTCTCCTCCAACAGTCCTTGCCCCTGACTGCCCAGCAGTCGCGGGGATCTaGAGGGGATGGAGAGCCGTA +
Preference number: 4 (lower is better)
Translates to: RAYTWANSPPTVLAPDCPAVAGI*RGWRAV
Trigger: TACGGCTCTCCATCCCCTCCAGATCCCCGCGACTGC...TGGGCAGTCAGGGGCAAGGACTGTTGGAGGAGAGTTAGCCCAAGTATAGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354955.5
CDS-3UTR CCA 90 bp GGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTGGGCAGTCGCACTCCTaGGGGCAGTCGCGGGGATCT +
Preference number: 4 (lower is better)
Translates to: GFCGFQVWSQERSPKIPSGQSHS*GQSRGS
Trigger: AGATCCCCGCGACTGCCCCCAGGAGTGCGACTGCCC...AGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp CAACAAATGGGAGCCCAGAGTAACTGCACGACCAGCCCAGCACAGAGGGAGAGCTGCCTTGGGGTCTCCTaGCTCTGCTTAAGGCACAGA +
Preference number: 4 (lower is better)
Translates to: QQMGAQSNCTTSPAQRESCLGVS*LCLRHR
Trigger: TCTGTGCCTTAAGCAGAGTCAGGAGACCCCAAGGCA...GCTCTCCCTCTGTGCTGGGCTGGTCGTGCAGTTACTCTGGGCTCCCATTTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp CAACAAATGGGAGCCCAGAGTAACTGCACGACCAGCCCAGCACAGAGGGAGAGCACAGTATCAGGGATGTaGTGGCATCTGGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: QQMGAQSNCTTSPAQRESTVSGM*WHLGRA
Trigger: GGCTCTGCCCAGATGCCATCACATCCCTGATACTGT...GCTCTCCCTCTGTGCTGGGCTGGTCGTGCAGTTACTCTGGGCTCCCATTTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp AGAGCCTATACTTGGGCTAACTCTCCTCCAACAGTCCTTGCCCCTGACTGCCCACATGCAGATGCTTTCTaGAGAGCCCTGGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: RAYTWANSPPTVLAPDCPHADAF*RALGQG
Trigger: CCCCTGCCCCAGGGCTCTTCAGAAAGCATCTGCATG...TGGGCAGTCAGGGGCAAGGACTGTTGGAGGAGAGTTAGCCCAAGTATAGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp GGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGGCCTTAACCCGGTGCCAGGGCTaGTCAGATCTCGATGAGGCT +
Preference number: 4 (lower is better)
Translates to: GLGFTDPSQSWYFLTMALTRCQG*SDLDEA
Trigger: AGCCTCATCGAGATCTGAGCAGCCCTGGCACCGGGT...TAAGGCCATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp GGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGGCCTTACAGGCAAGATTTGGCTaGCTGGCCTGGGCTTCACGG +
Preference number: 4 (lower is better)
Translates to: GLGFTDPSQSWYFLTMALQARFG*LAWASR
Trigger: CCGTGAAGCCCAGGCCAGGCAGCCAAATCTTGCCTG...TAAGGCCATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp CTGCCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGGCCGTAGGTGTAGGCTaGCCCTTCATCCACCCCATA +
Preference number: 4 (lower is better)
Translates to: LPGLGFTDPSQSWYFLTMAVGVG*PFIHPI
Trigger: TATGGGGTGGATGAAGGGCCAGCCTACACCTACGGC...CATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000354955.5
CDS-3UTR CCA 90 bp GCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTGAGGCGTGGGGAAGTTGGGTaGGCAGTCGCACTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: AGQEWNYWGCFLNSANLRRGEVG*AVALLG
Trigger: CCCCAGGAGTGCGACTGCCCACCCAACTTCCCCACG...CCTCAAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GCTGCCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGGGACCCGTGAGATCTaGTTGTGGTCGAGATGGAGC +
Preference number: 4 (lower is better)
Translates to: AAWPGLHGPQPELVLFNYGTREI*LWSRWS
Trigger: GCTCCATCTCGACCACAACCAGATCTCACGGGTCCC...ATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp CAACAAATGGGAGCCCAGAGTAACTGCACGACCAGCCCAGCACAGAGGGAGAGCGTCTCCACAGGTTGCTaGGCAGATGCTCACATGCCT +
Preference number: 4 (lower is better)
Translates to: QQMGAQSNCTTSPAQRESVSTGC*ADAHMP
Trigger: AGGCATGTGAGCATCTGCCCAGCAACCTGTGGAGAC...GCTCTCCCTCTGTGCTGGGCTGGTCGTGCAGTTACTCTGGGCTCCCATTTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp AGCCAAACCAAACCATCAAGCCAAATGCCACGGGGGCTCTCCGCCCAGTACCCGCACATCCTCCTTCTTTaGGCTAGCAAGTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SQTKPSSQMPRGLSAQYPHILLL*ASKSRA
Trigger: AGCCCTGGACTTGCTAGCCCAAAGAAGGAGGATGTG...CGGGTACTGGGCGGAGAGCCCCCGTGGCATTTGGCTTGATGGTTTGGTTTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GCTGCCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATAGCACAGGCAAGATTTaGCTGCCTGGCCTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: AAWPGLHGPQPELVLFNYSTGKI*LPGLGF
Trigger: GAAGCCCAGGCCAGGCAGCCAAATCTTGCCTGTGCT...ATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp CCCTGGAAAAGAGTGAGCTTCTGCCTATGTCCTCAGCAGAAGGCTGCCTGTCCCTGCTCCATGTACAGCTaGTCAAGAGCTGAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: PWKRVSFCLCPQQKAACPCSMYS*SRAEGS
Trigger: GCTGCCCTCAGCTCTTGAGCAGCTGTACATGGAGCA...GGGACAGGCAGCCTTCTGCTGAGGACATAGGCAGAAGCTCACTCTTTTCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp TTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTTCCCCGCCCAGTACCCGGTaGCAGGGCTGCTCAGATCTC +
Preference number: 4 (lower is better)
Translates to: FCGFQVWSQERSPKIPSSPPSTR*QGCSDL
Trigger: GAGATCTGAGCAGCCCTGGCACCGGGTACTGGGCGG...GGAAGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp AGAGCCTATACTTGGGCTAACTCTCCTCCAACAGTCCTTGCCCCTGACTGCCCACCACGTCCCTCTGTCTaGCCTCCTTGGGTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: RAYTWANSPPTVLAPDCPPRPSV*PPWVGE
Trigger: TTCTCCAACCCAAGGAGGCCAGACAGAGGGACGTGG...TGGGCAGTCAGGGGCAAGGACTGTTGGAGGAGAGTTAGCCCAAGTATAGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354955.5
CDS-3UTR CCA 90 bp AGAGCCTATACTTGGGCTAACTCTCCTCCAACAGTCCTTGCCCCTGACTGCCCAAGGGATCGTAGTAGGTaGACTGCTGGCTGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: RAYTWANSPPTVLAPDCPRDRSR*TAGCGG
Trigger: ACCTCCGCAGCCAGCAGTCCACCTACTACGATCCCT...TGGGCAGTCAGGGGCAAGGACTGTTGGAGGAGAGTTAGCCCAAGTATAGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354955.5
CDS-3UTR CCA 90 bp GGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGGCCTTACACAGTACATGGCCGTaGGGAAGTTGGGTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: GLGFTDPSQSWYFLTMALHSTWP*GSWVGS
Trigger: ACTGCCCACCCAACTTCCCCACGGCCATGTACTGTG...TAAGGCCATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp CTGCCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGCAGGTTGGTGTTGACTaGGGGGATCTTCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LPGLGFTDPSQSWYFLTMQVGVD*GDLLQL
Trigger: CAGCTGCAGAAGATCCCCCCAGTCAACACCAACCTG...CATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp CAACAAATGGGAGCCCAGAGTAACTGCACGACCAGCCCAGCACAGAGGGAGAGCGATGCTCACATGCCTTaGGGTCTCCTGACTCTGCTT +
Preference number: 4 (lower is better)
Translates to: QQMGAQSNCTTSPAQRESDAHMP*GLLTLL
Trigger: AAGCAGAGTCAGGAGACCCCAAGGCATGTGAGCATC...GCTCTCCCTCTGTGCTGGGCTGGTCGTGCAGTTACTCTGGGCTCCCATTTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GCTGCCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGTCTCCACAGGTTGCTaGGCAGATGCTCACATGCCT +
Preference number: 4 (lower is better)
Translates to: AAWPGLHGPQPELVLFNYVSTGC*ADAHMP
Trigger: AGGCATGTGAGCATCTGCCCAGCAACCTGTGGAGAC...ATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp AGCCAAACCAAACCATCAAGCCAAATGCCACGGGGGCTCTCCGCCCAGTACCCGAGTGCTGGGCAAGAATaGAACTACTGGGGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: SQTKPSSQMPRGLSAQYPSAGQE*NYWGCF
Trigger: AAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGCACT...CGGGTACTGGGCGGAGAGCCCCCGTGGCATTTGGCTTGATGGTTTGGTTTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GCTCACATGCCTTGGGGTCTCCTGACTCTGCTTAAGGCACAGAAGAGGCATCTGAGCACAGGCAAGATTTaGCTGCCTGGCCTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: AHMPWGLLTLLKAQKRHLSTGKI*LPGLGF
Trigger: GAAGCCCAGGCCAGGCAGCCAAATCTTGCCTGTGCT...CAGATGCCTCTTCTGTGCCTTAAGCAGAGTCAGGAGACCCCAAGGCATGTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGGCCTTATGCCCAAAGGGCAGGTaGGTTAAGCCCCAGGCAACA +
Preference number: 4 (lower is better)
Translates to: GLGFTDPSQSWYFLTMALCPKGR*VKPQAT
Trigger: TGTTGCCTGGGGCTTAACCCACCTGCCCTTTGGGCA...TAAGGCCATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp GGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGGCCTTAATTGTTGGGGACCCGTaGGATCTGGTTGTGGTCGAG +
Preference number: 4 (lower is better)
Translates to: GLGFTDPSQSWYFLTMALIVGDP*DLVVVE
Trigger: CTCGACCACAACCAGATCTCACGGGTCCCCAACAAT...TAAGGCCATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp TTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTTCCGGAGGTACAAGGCCGTaGGGTTCTCCAGCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: FCGFQVWSQERSPKIPSSGGTRP*GSPAPP
Trigger: TGGAGGGGCTGGAGAACCTCACGGCCTTGTACCTCC...GGAAGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp GAAATGAGCTGGTTTGGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTGCATGGCGCTGCGCTTaGTCTCGTTCCCGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: EMSWFGFCGFQVWSQERSAWRCA*SRSRPG
Trigger: GCCTGGACGGGAACGAGATCAAGCGCAGCGCCATGC...ACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCCAAACCAGCTCATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp GGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGGCCTTATGCCTTGGGGTCTCCTaGCTCTGCTTAAGGCACAGA +
Preference number: 4 (lower is better)
Translates to: GLGFTDPSQSWYFLTMALCLGVS*LCLRHR
Trigger: TCTGTGCCTTAAGCAGAGTCAGGAGACCCCAAGGCA...TAAGGCCATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp AGAGCCTATACTTGGGCTAACTCTCCTCCAACAGTCCTTGCCCCTGACTGCCCATGCTCCATGTACAGCTaGTCAAGAGCTGAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: RAYTWANSPPTVLAPDCPCSMYS*SRAEGS
Trigger: GCTGCCCTCAGCTCTTGAGCAGCTGTACATGGAGCA...TGGGCAGTCAGGGGCAAGGACTGTTGGAGGAGAGTTAGCCCAAGTATAGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp GTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTTCCCTTCTCCAGGCGCAGCACCTaGAGCTTGGAGAAGTTCACG +
Preference number: 4 (lower is better)
Translates to: VDSRSGAKNVVQRSPLPFSRRST*SLEKFT
Trigger: CGTGAACTTCTCCAAGCTGCAGGTGCTGCGCCTGGA...GAAGGGAAGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp GGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTAACCATCAAGCCAAATaGCACGGGGGCTCTCCGCCC +
Preference number: 4 (lower is better)
Translates to: GFCGFQVWSQERSPKIPSNHQAK*HGGSPP
Trigger: GGGCGGAGAGCCCCCGTGGCATTTGGCTTGATGGTT...AGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp CCCTGGAAAAGAGTGAGCTTCTGCCTATGTCCTCAGCAGAAGGCTGCCTGTCCCGAAGACTACAGAGGGTaGCCGTGGACTTCTGTCACA +
Preference number: 4 (lower is better)
Translates to: PWKRVSFCLCPQQKAACPEDYRG*PWTSVT
Trigger: TGTGACAGAAGTCCACGGGCACCCTCTGTAGTCTTC...GGGACAGGCAGCCTTCTGCTGAGGACATAGGCAGAAGCTCACTCTTTTCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp GCTGCCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGAAGACTACAGAGGGTaGCCGTGGACTTCTGTCACA +
Preference number: 4 (lower is better)
Translates to: AAWPGLHGPQPELVLFNYEDYRG*PWTSVT
Trigger: TGTGACAGAAGTCCACGGGCACCCTCTGTAGTCTTC...ATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp CATGATGGTGTTCACATGCAGATGCTTTCTGAAGAGCCCTGGGGCAGGGGGCAGGTTGTCTCCACAGGTTaGTGGGCAGATGCTCACATG +
Preference number: 4 (lower is better)
Translates to: HDGVHMQMLSEEPWGRGQVVSTG*WADAHM
Trigger: CATGTGAGCATCTGCCCAGCAACCTGTGGAGACAAC...CTGCCCCCTGCCCCAGGGCTCTTCAGAAAGCATCTGCATGTGAACACCATCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp CAACAAATGGGAGCCCAGAGTAACTGCACGACCAGCCCAGCACAGAGGGAGAGCGTGTTCACATGCAGATaGTTTCTGAAGAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: QQMGAQSNCTTSPAQRESVFTCR*FLKSPG
Trigger: CCCAGGGCTCTTCAGAAAGCATCTGCATGTGAACAC...GCTCTCCCTCTGTGCTGGGCTGGTCGTGCAGTTACTCTGGGCTCCCATTTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp TTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTTCCTGGCCGTGGGGAAGTTaGGTGGGCAGTCGCACTCCT +
Preference number: 4 (lower is better)
Translates to: FCGFQVWSQERSPKIPSSWPWGS*VGSRTP
Trigger: AGGAGTGCGACTGCCCACCCAACTTCCCCACGGCCA...GGAAGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp CCCTGGAAAAGAGTGAGCTTCTGCCTATGTCCTCAGCAGAAGGCTGCCTGTCCCGATTGTCACAGTACATaGCCGTGGGGAAGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: PWKRVSFCLCPQQKAACPDCHST*PWGSWV
Trigger: CACCCAACTTCCCCACGGCCATGTACTGTGACAATC...GGGACAGGCAGCCTTCTGCTGAGGACATAGGCAGAAGCTCACTCTTTTCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp AGAGCCTATACTTGGGCTAACTCTCCTCCAACAGTCCTTGCCCCTGACTGCCCAGTGATCTGGTTGCCGTaGAGAGCAATCCAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: RAYTWANSPPTVLAPDCPVIWLP*RAIQSS
Trigger: GCTGCTCTGGATTGCTCTCCACGGCAACCAGATCAC...TGGGCAGTCAGGGGCAAGGACTGTTGGAGGAGAGTTAGCCCAAGTATAGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp CTGCCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGCGTGAGATCTGGTTGTaGTCGAGATGGAGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: LPGLGFTDPSQSWYFLTMREIWL*SRWSSL
Trigger: GAGAGAGCTCCATCTCGACCACAACCAGATCTCACG...CATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGGCCTTACCTCCAGAGCATTGTTaGGGACCCGTGAGATCTGGT +
Preference number: 4 (lower is better)
Translates to: GLGFTDPSQSWYFLTMALPPEHC*GPVRSG
Trigger: ACCAGATCTCACGGGTCCCCAACAATGCTCTGGAGG...TAAGGCCATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp CAACAAATGGGAGCCCAGAGTAACTGCACGACCAGCCCAGCACAGAGGGAGAGCTTGGTTAGACTGTTGTaGGACAGCCGCACATACAGC +
Preference number: 4 (lower is better)
Translates to: QQMGAQSNCTTSPAQRESLVRLL*DSRTYS
Trigger: GCTGTATGTGCGGCTGTCCCACAACAGTCTAACCAA...GCTCTCCCTCTGTGCTGGGCTGGTCGTGCAGTTACTCTGGGCTCCCATTTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp CCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGGCCTGGACTTCTGTCACATaGTCCATCCTGGACCTTCCA +
Preference number: 4 (lower is better)
Translates to: PGLGFTDPSQSWYFLTMAWTSVT*SILDLP
Trigger: TGGAAGGTCCAGGATGGACCATGTGACAGAAGTCCA...GGCCATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGGCCTTACCCTCAGACACAGTGTaGGTTGTCTCCACAGGTTGC +
Preference number: 4 (lower is better)
Translates to: GLGFTDPSQSWYFLTMALPSDTV*VVSTGC
Trigger: GCAACCTGTGGAGACAACCCACACTGTGTCTGAGGG...TAAGGCCATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp CCCTGGAAAAGAGTGAGCTTCTGCCTATGTCCTCAGCAGAAGGCTGCCTGTCCCAAGTCCAGGGCTGCCTaGAGTCTGTCTCTACCATCA +
Preference number: 4 (lower is better)
Translates to: PWKRVSFCLCPQQKAACPKSRAA*SLSLPS
Trigger: TGATGGTAGAGACAGACTCCAGGCAGCCCTGGACTT...GGGACAGGCAGCCTTCTGCTGAGGACATAGGCAGAAGCTCACTCTTTTCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp AGGTGTGTTTGGCCCATTGCAGATGCTGATGGTAAGCAAAGTCTGGCCTTTCCTCTTTCTGAAGAGCCCTaGGGCAGGGGGCAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: RCVWPIADADGKQSLAFPLSEEP*GRGQPC
Trigger: GCAAGGCTGCCCCCTGCCCCAGGGCTCTTCAGAAAG...AGGAAAGGCCAGACTTTGCTTACCATCAGCATCTGCAATGGGCCAAACACACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp TATACTTGGGCTAACTCTCCTCCAACAGTCCTTGCCCCTGACTGCCCAGATGGCGAACTTTTCAGAGAGTaGCCACGTCCCTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: YTWANSPPTVLAPDCPDGELFRE*PRPSVW
Trigger: CCAGACAGAGGGACGTGGTCACTCTCTGAAAAGTTC...GCCATCTGGGCAGTCAGGGGCAAGGACTGTTGGAGGAGAGTTAGCCCAAGTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354955.5
CDS-3UTR TCA 90 bp TATACTTGGGCTAACTCTCCTCCAACAGTCCTTGCCCCTGACTGCCCAGATGGCCGAAGGGCAGGTACTTaGGGTTGCGATTGTCACAGT +
Preference number: 4 (lower is better)
Translates to: YTWANSPPTVLAPDCPDGRRAGT*GCDCHS
Trigger: ACTGTGACAATCGCAACCTCAAGTACCTGCCCTTCG...GCCATCTGGGCAGTCAGGGGCAAGGACTGTTGGAGGAGAGTTAGCCCAAGTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp GTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTTCCCTTCAGGTTGCTGGGCAGATaGTCACATGCCTTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: VDSRSGAKNVVQRSPLPFRLLGR*SHALGS
Trigger: AGACCCCAAGGCATGTGAGCATCTGCCCAGCAACCT...GAAGGGAAGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp CAACAAATGGGAGCCCAGAGTAACTGCACGACCAGCCCAGCACAGAGGGAGAGCTGGAACTACTGGGGCTaGTTTCTCAACTCAGCCAAT +
Preference number: 4 (lower is better)
Translates to: QQMGAQSNCTTSPAQRESWNYWG*FLNSAN
Trigger: ATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCA...GCTCTCCCTCTGTGCTGGGCTGGTCGTGCAGTTACTCTGGGCTCCCATTTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp CTGCCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGTCAAAGACGCCTTCCTaGATGGAGGTGATCTGGTTG +
Preference number: 4 (lower is better)
Translates to: LPGLGFTDPSQSWYFLTMSKTPS*MEVIWL
Trigger: CAACCAGATCACCTCCATCCAGGAAGGCGTCTTTGA...CATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTGAGGGGGACCCGTGAGATCTaGTTGTGGTCGAGATGGAGC +
Preference number: 4 (lower is better)
Translates to: AGQEWNYWGCFLNSANLRGTREI*LWSRWS
Trigger: GCTCCATCTCGACCACAACCAGATCTCACGGGTCCC...CCTCAAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GCTCACATGCCTTGGGGTCTCCTGACTCTGCTTAAGGCACAGAAGAGGCATCTGCAGAAGAGGCATCTGTaGAGGAAAGTGGAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: AHMPWGLLTLLKAQKRHLQKRHL*RKVEWV
Trigger: CACCCACTCCACTTTCCTCCACAGATGCCTCTTCTG...CAGATGCCTCTTCTGTGCCTTAAGCAGAGTCAGGAGACCCCAAGGCATGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GCTGCCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGACCCCAGCCAGAGCTaGTACTTTTTAACTATGGCC +
Preference number: 4 (lower is better)
Translates to: AAWPGLHGPQPELVLFNYDPSQS*YFLTMA
Trigger: GGCCATAGTTAAAAAGTACCAGCTCTGGCTGGGGTC...ATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp AGGTGTGTTTGGCCCATTGCAGATGCTGATGGTAAGCAAAGTCTGGCCTTTCCTCAAGATTTGGCTGCCTaGCCTGGGCTTCACGGACCC +
Preference number: 4 (lower is better)
Translates to: RCVWPIADADGKQSLAFPQDLAA*PGLHGP
Trigger: GGGTCCGTGAAGCCCAGGCCAGGCAGCCAAATCTTG...AGGAAAGGCCAGACTTTGCTTACCATCAGCATCTGCAATGGGCCAAACACACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GAAATGAGCTGGTTTGGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCTTTCTGAAGAGCCCTaGGGCAGGGGGCAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: EMSWFGFCGFQVWSQERSLSEEP*GRGQPC
Trigger: GCAAGGCTGCCCCCTGCCCCAGGGCTCTTCAGAAAG...ACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCCAAACCAGCTCATTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp GCTTCAAAGCATACACAGTATCAGGGATGTGATGGCATCTGGGCAGAGCCTATAGTCCAGCAAGATCAGTaGCCGGAGGCCCCTCATGGA +
Preference number: 4 (lower is better)
Translates to: ASKHTQYQGCDGIWAEPIVQQDQ*PEAPHG
Trigger: TCCATGAGGGGCCTCCGGTCACTGATCTTGCTGGAC...TATAGGCTCTGCCCAGATGCCATCACATCCCTGATACTGTGTATGCTTTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp ATCATTGGGAAGAACTTAAGAGCCGTGAGATTTATGGGGTTGGAACATCCAGGGGAGGGAGAAGAGCCCTaGCAGCAGCAGGAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: IIGKNLRAVRFMGLEHPGEGEEP*QQQEGG
Trigger: ACCTCCCTCCTGCTGCTGGCAGGGCTCTTCTCCCTC...CCCTGGATGTTCCAACCCCATAAATCTCACGGCTCTTAAGTTCTTCCCAATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354955.5
CDS-3UTR GCA 90 bp GGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTGGCCCCTCATGGAACTaGCCACTTCCTGGATCTCAT +
Preference number: 4 (lower is better)
Translates to: GFCGFQVWSQERSPKIPSGPSWN*PLPGSH
Trigger: ATGAGATCCAGGAAGTGGGCAGTTCCATGAGGGGCC...AGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp TTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTTCCGGGAGAGCTGTCAAGTaGTGCTCACAGACAGCCAGG +
Preference number: 4 (lower is better)
Translates to: FCGFQVWSQERSPKIPSSGRAVK*CSQTAR
Trigger: CCTGGCTGTCTGTGAGCAGCACTTGACAGCTCTCCC...GGAAGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp GCTTCAAAGCATACACAGTATCAGGGATGTGATGGCATCTGGGCAGAGCCTATAGGAGCCCAGAGTAACTaGACGACCAGCCCAGCACAG +
Preference number: 4 (lower is better)
Translates to: ASKHTQYQGCDGIWAEPIGAQSN*TTSPAQ
Trigger: CTGTGCTGGGCTGGTCGTGCAGTTACTCTGGGCTCC...TATAGGCTCTGCCCAGATGCCATCACATCCCTGATACTGTGTATGCTTTGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTTCCCTTCTCCAGAGCAGCCCTGTaGCATTGTCAAAGACGCCTT +
Preference number: 4 (lower is better)
Translates to: VDSRSGAKNVVQRSPLPFSRAAL*HCQRRL
Trigger: AAGGCGTCTTTGACAATGCCACAGGGCTGCTCTGGA...GAAGGGAAGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTTCCCTTCTGGTTGTGGTCGAGATaGAGCTCTCTCAGGGATCGA +
Preference number: 4 (lower is better)
Translates to: VDSRSGAKNVVQRSPLPFWLWSR*SSLRDR
Trigger: TCGATCCCTGAGAGAGCTCCATCTCGACCACAACCA...GAAGGGAAGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp TATACTTGGGCTAACTCTCCTCCAACAGTCCTTGCCCCTGACTGCCCAGATGGCGAACTGCCCACTTCCTaGATCTCATTGTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: YTWANSPPTVLAPDCPDGELPTS*ISLCWR
Trigger: CCTCCAACACAATGAGATCCAGGAAGTGGGCAGTTC...GCCATCTGGGCAGTCAGGGGCAAGGACTGTTGGAGGAGAGTTAGCCCAAGTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp AGCCAAACCAAACCATCAAGCCAAATGCCACGGGGGCTCTCCGCCCAGTACCCGATGACCTCAGATCATTaGGAAGAACTTAAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: SQTKPSSQMPRGLSAQYPMTSDH*EELKSR
Trigger: ACGGCTCTTAAGTTCTTCCCAATGATCTGAGGTCAT...CGGGTACTGGGCGGAGAGCCCCCGTGGCATTTGGCTTGATGGTTTGGTTTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTCCCTCAGACACAGTGTaGGTTGTCTCCACAGGTTGC +
Preference number: 4 (lower is better)
Translates to: GFCGFQVWSQERSPKIPSPSDTV*VVSTGC
Trigger: GCAACCTGTGGAGACAACCCACACTGTGTCTGAGGG...AGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp AAGTGCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTCAAGATTTGGCTGCCTaGCCTGGGCTTCACGGACCC +
Preference number: 4 (lower is better)
Translates to: KCWARMELLGLLSQLSQFQDLAA*PGLHGP
Trigger: GGGTCCGTGAAGCCCAGGCCAGGCAGCCAAATCTTG...AAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp CAAAGTCTGGCCTTTCCTCTTCTGAAGTCTTATCCACCTTCAAAGAGCTACCCAGTCCAGCAAGATCAGTaGCCGGAGGCCCCTCATGGA +
Preference number: 4 (lower is better)
Translates to: QSLAFPLLKSYPPSKSYPVQQDQ*PEAPHG
Trigger: TCCATGAGGGGCCTCCGGTCACTGATCTTGCTGGAC...TGGGTAGCTCTTTGAAGGTGGATAAGACTTCAGAAGAGGAAAGGCCAGACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp GCTCACATGCCTTGGGGTCTCCTGACTCTGCTTAAGGCACAGAAGAGGCATCTGTTATCATCATGCTGGTaGCCTCCAATCTGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: AHMPWGLLTLLKAQKRHLLSSCW*PPIWWL
Trigger: AAGCCACCAGATTGGAGGTCACCAGCATGATGATAA...CAGATGCCTCTTCTGTGCCTTAAGCAGAGTCAGGAGACCCCAAGGCATGTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp AGAGCCTATACTTGGGCTAACTCTCCTCCAACAGTCCTTGCCCCTGACTGCCCATTATCATCATGCTGGTaGCCTCCAATCTGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: RAYTWANSPPTVLAPDCPLSSCW*PPIWWL
Trigger: AAGCCACCAGATTGGAGGTCACCAGCATGATGATAA...TGGGCAGTCAGGGGCAAGGACTGTTGGAGGAGAGTTAGCCCAAGTATAGGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp CATGATGGTGTTCACATGCAGATGCTTTCTGAAGAGCCCTGGGGCAGGGGGCAGTATAGCCCTATACATTaGTCTAAGCCTGAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: HDGVHMQMLSEEPWGRGQYSPIH*SKPEVG
Trigger: GCCAACCTCAGGCTTAGATCAATGTATAGGGCTATA...CTGCCCCCTGCCCCAGGGCTCTTCAGAAAGCATCTGCATGTGAACACCATCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp CATGATGGTGTTCACATGCAGATGCTTTCTGAAGAGCCCTGGGGCAGGGGGCAGTATAGCTCAGAGATGTaGAAGCAGAGGGTTGTATGC +
Preference number: 4 (lower is better)
Translates to: HDGVHMQMLSEEPWGRGQYSSEM*KQRVVC
Trigger: GCATACAACCCTCTGCTTTCACATCTCTGAGCTATA...CTGCCCCCTGCCCCAGGGCTCTTCAGAAAGCATCTGCATGTGAACACCATCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp AGAGCCTATACTTGGGCTAACTCTCCTCCAACAGTCCTTGCCCCTGACTGCCCATCGGAGCTCCTTTGTTaGAATGAGCTGGTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: RAYTWANSPPTVLAPDCPSELLC*NELVWL
Trigger: AAGCCAAACCAGCTCATTTCAACAAAGGAGCTCCGA...TGGGCAGTCAGGGGCAAGGACTGTTGGAGGAGAGTTAGCCCAAGTATAGGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp CAAAGTCTGGCCTTTCCTCTTCTGAAGTCTTATCCACCTTCAAAGAGCTACCCACATGCAGATGCTTTCTaGAGAGCCCTGGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: QSLAFPLLKSYPPSKSYPHADAF*RALGQG
Trigger: CCCCTGCCCCAGGGCTCTTCAGAAAGCATCTGCATG...TGGGTAGCTCTTTGAAGGTGGATAAGACTTCAGAAGAGGAAAGGCCAGACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp CAAAGTCTGGCCTTTCCTCTTCTGAAGTCTTATCCACCTTCAAAGAGCTACCCAAACCATCAAGCCAAATaGCACGGGGGCTCTCCGCCC +
Preference number: 4 (lower is better)
Translates to: QSLAFPLLKSYPPSKSYPNHQAK*HGGSPP
Trigger: GGGCGGAGAGCCCCCGTGGCATTTGGCTTGATGGTT...TGGGTAGCTCTTTGAAGGTGGATAAGACTTCAGAAGAGGAAAGGCCAGACTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp AGGTGTGTTTGGCCCATTGCAGATGCTGATGGTAAGCAAAGTCTGGCCTTTCCTAGGTTGCTGGGCAGATaGTCACATGCCTTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: RCVWPIADADGKQSLAFPRLLGR*SHALGS
Trigger: AGACCCCAAGGCATGTGAGCATCTGCCCAGCAACCT...AGGAAAGGCCAGACTTTGCTTACCATCAGCATCTGCAATGGGCCAAACACACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp GGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTGTTGTCTCCACAGGTTaGTGGGCAGATGCTCACATG +
Preference number: 4 (lower is better)
Translates to: GFCGFQVWSQERSPKIPSVVSTG*WADAHM
Trigger: CATGTGAGCATCTGCCCAGCAACCTGTGGAGACAAC...AGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp CAACAAATGGGAGCCCAGAGTAACTGCACGACCAGCCCAGCACAGAGGGAGAGCAAAGAGCTACCCAGCTaGCAAAATATAGCCCTATAC +
Preference number: 4 (lower is better)
Translates to: QQMGAQSNCTTSPAQRESKELPS*QNIALY
Trigger: GTATAGGGCTATATTTTGGCAGCTGGGTAGCTCTTT...GCTCTCCCTCTGTGCTGGGCTGGTCGTGCAGTTACTCTGGGCTCCCATTTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp GGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGGCCTTATGGAACTACTGGGGCTaGTTTCTCAACTCAGCCAAT +
Preference number: 4 (lower is better)
Translates to: GLGFTDPSQSWYFLTMALWNYWG*FLNSAN
Trigger: ATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCA...TAAGGCCATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp TTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTTCCGCTTTGTCCCAACCTTaGCCAAAGGGCAGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: FCGFQVWSQERSPKIPSSALSQP*PKGRWV
Trigger: AACCCACCTGCCCTTTGGGCAAGGTTGGGACAAAGC...GGAAGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp TATATTTTGAGAAGCAACAAATGGGAGCCCAGAGTAACTGCACGACCAGCCCAGGTCCTTGCCCCTGACTaGCCAGATGGCTTTGTCCCA +
Preference number: 4 (lower is better)
Translates to: YILRSNKWEPRVTARPAQVLAPD*PDGFVP
Trigger: TGGGACAAAGCCATCTGGGCAGTCAGGGGCAAGGAC...CTGGGCTGGTCGTGCAGTTACTCTGGGCTCCCATTTGTTGCTTCTCAAAATATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp GCTTCAAAGCATACACAGTATCAGGGATGTGATGGCATCTGGGCAGAGCCTATAGTCCTTGCCCCTGACTaGCCAGATGGCTTTGTCCCA +
Preference number: 4 (lower is better)
Translates to: ASKHTQYQGCDGIWAEPIVLAPD*PDGFVP
Trigger: TGGGACAAAGCCATCTGGGCAGTCAGGGGCAAGGAC...TATAGGCTCTGCCCAGATGCCATCACATCCCTGATACTGTGTATGCTTTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp TGGAATGCAGAAAGTGCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACCTGGCCTCCTTGGGTTaGAGAACGTGTGAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: WNAESAGQEWNYWGCFLNLASLG*RTCERG
Trigger: TCCTCTCTCACACGTTCTCCAACCCAAGGAGGCCAG...GTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGCACTTTCTGCATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354955.5
CDS-3UTR CCA 90 bp GGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTTCTGTCTGGCCTCCTTaGGTTGGAGAACGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: GFCGFQVWSQERSPKIPSSVWPP*VGERVR
Trigger: TCTCACACGTTCTCCAACCCAAGGAGGCCAGACAGA...AGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354955.5
CDS-3UTR CCA 90 bp AGGTGTGTTTGGCCCATTGCAGATGCTGATGGTAAGCAAAGTCTGGCCTTTCCTGGGTCATCTTCATACTaGGCCTGGGAGAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: RCVWPIADADGKQSLAFPGSSSY*AWEREK
Trigger: CTTCTCCCTCTCCCAGGCCCAGTATGAAGATGACCC...AGGAAAGGCCAGACTTTGCTTACCATCAGCATCTGCAATGGGCCAAACACACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354955.5
CDS-3UTR CCA 90 bp ATCATTGGGAAGAACTTAAGAGCCGTGAGATTTATGGGGTTGGAACATCCAGGGGGGATCTGGAGGGGATaGAGAGCCGTAGGTGTAGGC +
Preference number: 4 (lower is better)
Translates to: IIGKNLRAVRFMGLEHPGGIWRG*RAVGVG
Trigger: GCCTACACCTACGGCTCTCCATCCCCTCCAGATCCC...CCCTGGATGTTCCAACCCCATAAATCTCACGGCTCTTAAGTTCTTCCCAATGAT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000354955.5
CDS-3UTR CCA 90 bp AAGTGCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTCACAGTACATGGCCGTaGGGAAGTTGGGTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: KCWARMELLGLLSQLSQFHSTWP*GSWVGS
Trigger: ACTGCCCACCCAACTTCCCCACGGCCATGTACTGTG...AAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GCTGCCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATTGGATGGAGGTGATCTaGTTGTTCTGGAAGTACACA +
Preference number: 4 (lower is better)
Translates to: AAWPGLHGPQPELVLFNYWMEVI*LFWKYT
Trigger: TGTGTACTTCCAGAACAACCAGATCACCTCCATCCA...ATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp CTGCCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGTTGAGAAGCAACAAATaGGAGCCCAGAGTAACTGCA +
Preference number: 4 (lower is better)
Translates to: LPGLGFTDPSQSWYFLTMLRSNK*EPRVTA
Trigger: TGCAGTTACTCTGGGCTCCCATTTGTTGCTTCTCAA...CATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp CCCTGGAAAAGAGTGAGCTTCTGCCTATGTCCTCAGCAGAAGGCTGCCTGTCCCTGGAGGAAAGTGGAGTaGGTGAAGTGGATTTCAGAA +
Preference number: 4 (lower is better)
Translates to: PWKRVSFCLCPQQKAACPWRKVE*VKWISE
Trigger: TTCTGAAATCCACTTCACCCACTCCACTTTCCTCCA...GGGACAGGCAGCCTTCTGCTGAGGACATAGGCAGAAGCTCACTCTTTTCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp TATATTTTGAGAAGCAACAAATGGGAGCCCAGAGTAACTGCACGACCAGCCCAGTGCCCAAAGGGCAGGTaGGTTAAGCCCCAGGCAACA +
Preference number: 4 (lower is better)
Translates to: YILRSNKWEPRVTARPAQCPKGR*VKPQAT
Trigger: TGTTGCCTGGGGCTTAACCCACCTGCCCTTTGGGCA...CTGGGCTGGTCGTGCAGTTACTCTGGGCTCCCATTTGTTGCTTCTCAAAATATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp TATATTTTGAGAAGCAACAAATGGGAGCCCAGAGTAACTGCACGACCAGCCCAGGGGTTGGAGAACGTGTaGGAGAGGAAGAGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: YILRSNKWEPRVTARPAQGLENV*ERKRER
Trigger: CCTCTCTCTCTTCCTCTCTCACACGTTCTCCAACCC...CTGGGCTGGTCGTGCAGTTACTCTGGGCTCCCATTTGTTGCTTCTCAAAATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354955.5
CDS-3UTR TCA 90 bp GCTTCAAAGCATACACAGTATCAGGGATGTGATGGCATCTGGGCAGAGCCTATACCACCTTATCACTGGTaGTCTGGTTGCCGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: ASKHTQYQGCDGIWAEPIPPYHW*SGCRGE
Trigger: CTCTCCACGGCAACCAGATCACCAGTGATAAGGTGG...TATAGGCTCTGCCCAGATGCCATCACATCCCTGATACTGTGTATGCTTTGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp GAAATGAGCTGGTTTGGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTATTGTTGGGGACCCGTaGGATCTGGTTGTGGTCGAG +
Preference number: 4 (lower is better)
Translates to: EMSWFGFCGFQVWSQERSIVGDP*DLVVVE
Trigger: CTCGACCACAACCAGATCTCACGGGTCCCCAACAAT...ACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCCAAACCAGCTCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp GTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTTCCCTTCTGCCCATGCCACTTTTaGAGTTCCATGACCTCAGAT +
Preference number: 4 (lower is better)
Translates to: VDSRSGAKNVVQRSPLPFCPCHF*SSMTSD
Trigger: ATCTGAGGTCATGGAACTTCAAAAGTGGCATGGGCA...GAAGGGAAGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp AAGTGCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTACAGTATCAGGGATGTaGTGGCATCTGGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: KCWARMELLGLLSQLSQFTVSGM*WHLGRA
Trigger: GGCTCTGCCCAGATGCCATCACATCCCTGATACTGT...AAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp GGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTAGTACACATACTTCATaGGGGAGGGAACGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: GFCGFQVWSQERSPKIPSSTHTS*GRERRA
Trigger: TGCCCTTCGTTCCCTCCCGCATGAAGTATGTGTACT...AGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp AAGTGCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTGCTTTGTCCCAACCTTaGCCAAAGGGCAGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: KCWARMELLGLLSQLSQFALSQP*PKGRWV
Trigger: AACCCACCTGCCCTTTGGGCAAGGTTGGGACAAAGC...AAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp GCTCACATGCCTTGGGGTCTCCTGACTCTGCTTAAGGCACAGAAGAGGCATCTGGCTGATCACTGCTTATaGACTAGCATCATCCACTTC +
Preference number: 4 (lower is better)
Translates to: AHMPWGLLTLLKAQKRHLADHCL*TSIIHF
Trigger: GAAGTGGATGATGCTAGTGCATAAGCAGTGATCAGC...CAGATGCCTCTTCTGTGCCTTAAGCAGAGTCAGGAGACCCCAAGGCATGTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647586.1
CDS-3UTR CCA 90 bp GGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGGCCTTATGGATGGAGGTGATCTaGTTGTTCTGGAAGTACACA +
Preference number: 4 (lower is better)
Translates to: GLGFTDPSQSWYFLTMALWMEVI*LFWKYT
Trigger: TGTGTACTTCCAGAACAACCAGATCACCTCCATCCA...TAAGGCCATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTGAGGTCAAAGACGCCTTCCTaGATGGAGGTGATCTGGTTG +
Preference number: 4 (lower is better)
Translates to: AGQEWNYWGCFLNSANLRSKTPS*MEVIWL
Trigger: CAACCAGATCACCTCCATCCAGGAAGGCGTCTTTGA...CCTCAAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp TTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTTCCTGGTTGTGGTCGAGATaGAGCTCTCTCAGGGATCGA +
Preference number: 4 (lower is better)
Translates to: FCGFQVWSQERSPKIPSSWLWSR*SSLRDR
Trigger: TCGATCCCTGAGAGAGCTCCATCTCGACCACAACCA...GGAAGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTTGGATCTCATTGTGTTaGAGGTACAAGGCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: GFCGFQVWSQERSPKIPSWISLC*RYKAVR
Trigger: CCTCACGGCCTTGTACCTCCAACACAATGAGATCCA...AGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTGAGGAGGCCAGGCCATTGTTaGTTAGACTGTTGTGGGACA +
Preference number: 4 (lower is better)
Translates to: AGQEWNYWGCFLNSANLRRPGHC*LDCCGT
Trigger: TGTCCCACAACAGTCTAACCAACAATGGCCTGGCCT...CCTCAAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp ATAGCTCAGAGATGTGAAAGCAGAGGGTTGTATGCCCAGCACAGGCAAGATTTGTACAGAGGGTGCCCGTaGACTTCTGTCACATGGTCC +
Preference number: 4 (lower is better)
Translates to: IAQRCESRGLYAQHRQDLYRGCP*TSVTWS
Trigger: GGACCATGTGACAGAAGTCCACGGGCACCCTCTGTA...CAAATCTTGCCTGTGCTGGGCATACAACCCTCTGCTTTCACATCTCTGAGCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp TGGAATGCAGAAAGTGCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACCAGAAGAGGCATCTGTaGAGGAAAGTGGAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: WNAESAGQEWNYWGCFLNQKRHL*RKVEWV
Trigger: CACCCACTCCACTTTCCTCCACAGATGCCTCTTCTG...GTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGCACTTTCTGCATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GCTCACATGCCTTGGGGTCTCCTGACTCTGCTTAAGGCACAGAAGAGGCATCTGCAAGAATGGAACTACTaGGGCTGCTTTCTCAACTCA +
Preference number: 4 (lower is better)
Translates to: AHMPWGLLTLLKAQKRHLQEWNY*GCFLNS
Trigger: TGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTG...CAGATGCCTCTTCTGTGCCTTAAGCAGAGTCAGGAGACCCCAAGGCATGTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTAGTGCTGGGCAAGAATaGAACTACTGGGGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: GFCGFQVWSQERSPKIPSSAGQE*NYWGCF
Trigger: AAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGCACT...AGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTGACCCCAGCCAGAGCTaGTACTTTTTAACTATGGCC +
Preference number: 4 (lower is better)
Translates to: GFCGFQVWSQERSPKIPSDPSQS*YFLTMA
Trigger: GGCCATAGTTAAAAAGTACCAGCTCTGGCTGGGGTC...AGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp AGGTGTGTTTGGCCCATTGCAGATGCTGATGGTAAGCAAAGTCTGGCCTTTCCTGGATGTGATGGCATCTaGGCAGAGCCTATACTTGGG +
Preference number: 4 (lower is better)
Translates to: RCVWPIADADGKQSLAFPGCDGI*AEPILG
Trigger: CCCAAGTATAGGCTCTGCCCAGATGCCATCACATCC...AGGAAAGGCCAGACTTTGCTTACCATCAGCATCTGCAATGGGCCAAACACACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTGAGGTGTGGATTCCAGGTCTaGAGCCAAGAACGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: AGQEWNYWGCFLNSANLRCGFQV*SQERSP
Trigger: TGGACTACGTTCTTGGCTCCAGACCTGGAATCCACA...CCTCAAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp CAAAGTCTGGCCTTTCCTCTTCTGAAGTCTTATCCACCTTCAAAGAGCTACCCACCACCTTATCACTGGTaGTCTGGTTGCCGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: QSLAFPLLKSYPPSKSYPPPYHW*SGCRGE
Trigger: CTCTCCACGGCAACCAGATCACCAGTGATAAGGTGG...TGGGTAGCTCTTTGAAGGTGGATAAGACTTCAGAAGAGGAAAGGCCAGACTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp GGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGGCCTTAACTTTTGAAGTTCCATaGCCTCAGATCATTGGGAAG +
Preference number: 4 (lower is better)
Translates to: GLGFTDPSQSWYFLTMALTFEVP*PQIIGK
Trigger: CTTCCCAATGATCTGAGGTCATGGAACTTCAAAAGT...TAAGGCCATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp GGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGGCCTTATTAGGACAAACCAGGTaGAACAGATTAACCACATCC +
Preference number: 4 (lower is better)
Translates to: GLGFTDPSQSWYFLTMALLGQTR*NRLTTS
Trigger: GGATGTGGTTAATCTGTTTCACCTGGTTTGTCCTAA...TAAGGCCATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp GCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTGAGGAGGAGGGAGGTCCACTaGATTTTGTCTCTCAAGTTG +
Preference number: 4 (lower is better)
Translates to: AGQEWNYWGCFLNSANLRRREVH*ILSLKL
Trigger: CAACTTGAGAGACAAAATGCAGTGGACCTCCCTCCT...CCTCAAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354955.5
CDS-3UTR GCA 90 bp AGGTGTGTTTGGCCCATTGCAGATGCTGATGGTAAGCAAAGTCTGGCCTTTCCTAGTACACATACTTCATaGGGGAGGGAACGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: RCVWPIADADGKQSLAFPSTHTS*GRERRA
Trigger: TGCCCTTCGTTCCCTCCCGCATGAAGTATGTGTACT...AGGAAAGGCCAGACTTTGCTTACCATCAGCATCTGCAATGGGCCAAACACACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp ATAGCTCAGAGATGTGAAAGCAGAGGGTTGTATGCCCAGCACAGGCAAGATTTGGATTGTCACAGTACATaGCCGTGGGGAAGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: IAQRCESRGLYAQHRQDLDCHST*PWGSWV
Trigger: CACCCAACTTCCCCACGGCCATGTACTGTGACAATC...CAAATCTTGCCTGTGCTGGGCATACAACCCTCTGCTTTCACATCTCTGAGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GCTGCCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGTGATCTGGTTGTTCTaGAAGTACACATACTTCATG +
Preference number: 4 (lower is better)
Translates to: AAWPGLHGPQPELVLFNYVIWLF*KYTYFM
Trigger: CATGAAGTATGTGTACTTCCAGAACAACCAGATCAC...ATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGGCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp TATATTTTGAGAAGCAACAAATGGGAGCCCAGAGTAACTGCACGACCAGCCCAGTCCAGAGCAGCCCTGTaGCATTGTCAAAGACGCCTT +
Preference number: 4 (lower is better)
Translates to: YILRSNKWEPRVTARPAQSRAAL*HCQRRL
Trigger: AAGGCGTCTTTGACAATGCCACAGGGCTGCTCTGGA...CTGGGCTGGTCGTGCAGTTACTCTGGGCTCCCATTTGTTGCTTCTCAAAATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GAAATGAGCTGGTTTGGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCGTGAGATCTGGTTGTaGTCGAGATGGAGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: EMSWFGFCGFQVWSQERSREIWL*SRWSSL
Trigger: GAGAGAGCTCCATCTCGACCACAACCAGATCTCACG...ACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCCAAACCAGCTCATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp ATCATTGGGAAGAACTTAAGAGCCGTGAGATTTATGGGGTTGGAACATCCAGGGCCTCCAGAGCATTGTTaGGGACCCGTGAGATCTGGT +
Preference number: 4 (lower is better)
Translates to: IIGKNLRAVRFMGLEHPGPPEHC*GPVRSG
Trigger: ACCAGATCTCACGGGTCCCCAACAATGCTCTGGAGG...CCCTGGATGTTCCAACCCCATAAATCTCACGGCTCTTAAGTTCTTCCCAATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp AGGTGTGTTTGGCCCATTGCAGATGCTGATGGTAAGCAAAGTCTGGCCTTTCCTTGGATCTCATTGTGTTaGAGGTACAAGGCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: RCVWPIADADGKQSLAFPWISLC*RYKAVR
Trigger: CCTCACGGCCTTGTACCTCCAACACAATGAGATCCA...AGGAAAGGCCAGACTTTGCTTACCATCAGCATCTGCAATGGGCCAAACACACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp CAAAGTCTGGCCTTTCCTCTTCTGAAGTCTTATCCACCTTCAAAGAGCTACCCAGCAGCACCTGCAGCTTaGAGAAGTTCACGACGTCCA +
Preference number: 4 (lower is better)
Translates to: QSLAFPLLKSYPPSKSYPAAPAA*RSSRRP
Trigger: TGGACGTCGTGAACTTCTCCAAGCTGCAGGTGCTGC...TGGGTAGCTCTTTGAAGGTGGATAAGACTTCAGAAGAGGAAAGGCCAGACTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp ATCATTGGGAAGAACTTAAGAGCCGTGAGATTTATGGGGTTGGAACATCCAGGGTACAGAGGGTGCCCGTaGACTTCTGTCACATGGTCC +
Preference number: 4 (lower is better)
Translates to: IIGKNLRAVRFMGLEHPGYRGCP*TSVTWS
Trigger: GGACCATGTGACAGAAGTCCACGGGCACCCTCTGTA...CCCTGGATGTTCCAACCCCATAAATCTCACGGCTCTTAAGTTCTTCCCAATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp AAGTGCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTGATGCTCACATGCCTTaGGGTCTCCTGACTCTGCTT +
Preference number: 4 (lower is better)
Translates to: KCWARMELLGLLSQLSQFDAHMP*GLLTLL
Trigger: AAGCAGAGTCAGGAGACCCCAAGGCATGTGAGCATC...AAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTTCCCTTCGAATGCAGAAAGTGCTaGGCAAGAATGGAACTACTG +
Preference number: 4 (lower is better)
Translates to: VDSRSGAKNVVQRSPLPFECRKC*ARMELL
Trigger: CAGTAGTTCCATTCTTGCCCAGCACTTTCTGCATTC...GAAGGGAAGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp ATAGCTCAGAGATGTGAAAGCAGAGGGTTGTATGCCCAGCACAGGCAAGATTTGAAGTCCAGGGCTGCCTaGAGTCTGTCTCTACCATCA +
Preference number: 4 (lower is better)
Translates to: IAQRCESRGLYAQHRQDLKSRAA*SLSLPS
Trigger: TGATGGTAGAGACAGACTCCAGGCAGCCCTGGACTT...CAAATCTTGCCTGTGCTGGGCATACAACCCTCTGCTTTCACATCTCTGAGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp ATAGCTCAGAGATGTGAAAGCAGAGGGTTGTATGCCCAGCACAGGCAAGATTTGGGATGTGATGGCATCTaGGCAGAGCCTATACTTGGG +
Preference number: 4 (lower is better)
Translates to: IAQRCESRGLYAQHRQDLGCDGI*AEPILG
Trigger: CCCAAGTATAGGCTCTGCCCAGATGCCATCACATCC...CAAATCTTGCCTGTGCTGGGCATACAACCCTCTGCTTTCACATCTCTGAGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp TTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTTCCTGTGGATTCCAGGTCTaGAGCCAAGAACGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: FCGFQVWSQERSPKIPSSCGFQV*SQERSP
Trigger: TGGACTACGTTCTTGGCTCCAGACCTGGAATCCACA...GGAAGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CAA 72 bp AATGAGGATATAGCTCAGAGATGTGAAAGCAGAGGGTaGTATGCCCAGCACAGGCAAGATTTGGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: NEDIAQRCESRG*YAQHRQDLAAW
Trigger: CCAGGCAGCCAAATCTTGCCTGTGCTGGGCATACAACCCTCTGCTTTCACATCTCTGAGCTATATCCTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp CAAAGTCTGGCCTTTCCTCTTCTGAAGTCTTATCCACCTTCAAAGAGCTACCCACGAAGGGCAGGTACTTaGGGTTGCGATTGTCACAGT +
Preference number: 4 (lower is better)
Translates to: QSLAFPLLKSYPPSKSYPRRAGT*GCDCHS
Trigger: ACTGTGACAATCGCAACCTCAAGTACCTGCCCTTCG...TGGGTAGCTCTTTGAAGGTGGATAAGACTTCAGAAGAGGAAAGGCCAGACTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp CAAAGTCTGGCCTTTCCTCTTCTGAAGTCTTATCCACCTTCAAAGAGCTACCCAAGAGCTGTCAAGTGCTaGTCACAGACAGCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: QSLAFPLLKSYPPSKSYPRAVKC*SQTARD
Trigger: ATCCCTGGCTGTCTGTGAGCAGCACTTGACAGCTCT...TGGGTAGCTCTTTGAAGGTGGATAAGACTTCAGAAGAGGAAAGGCCAGACTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp TATACTTGGGCTAACTCTCCTCCAACAGTCCTTGCCCCTGACTGCCCAGATGGCGTTAGCCACCACTCATaGTTTTCCTGTAATAAGGAT +
Preference number: 4 (lower is better)
Translates to: YTWANSPPTVLAPDCPDGVSHHS*FSCNKD
Trigger: ATCCTTATTACAGGAAAAGCATGAGTGGTGGCTAAC...GCCATCTGGGCAGTCAGGGGCAAGGACTGTTGGAGGAGAGTTAGCCCAAGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354955.5
CDS-3UTR CCA 90 bp AGGTGTGTTTGGCCCATTGCAGATGCTGATGGTAAGCAAAGTCTGGCCTTTCCTTTATCACTGGTGATCTaGTTGCCGTGGAGAGCAATC +
Preference number: 4 (lower is better)
Translates to: RCVWPIADADGKQSLAFPLSLVI*LPWRAI
Trigger: GATTGCTCTCCACGGCAACCAGATCACCAGTGATAA...AGGAAAGGCCAGACTTTGCTTACCATCAGCATCTGCAATGGGCCAAACACACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp AAGTGCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTGAACTGCCCACTTCCTaGATCTCATTGTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: KCWARMELLGLLSQLSQFELPTS*ISLCWR
Trigger: CCTCCAACACAATGAGATCCAGGAAGTGGGCAGTTC...AAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp AAGTGCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTTTGGTTAGACTGTTGTaGGACAGCCGCACATACAGC +
Preference number: 4 (lower is better)
Translates to: KCWARMELLGLLSQLSQFLVRLL*DSRTYS
Trigger: GCTGTATGTGCGGCTGTCCCACAACAGTCTAACCAA...AAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGCACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GAAATGAGCTGGTTTGGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTTGGACTTCTGTCACATaGTCCATCCTGGACCTTCCA +
Preference number: 4 (lower is better)
Translates to: EMSWFGFCGFQVWSQERSWTSVT*SILDLP
Trigger: TGGAAGGTCCAGGATGGACCATGTGACAGAAGTCCA...ACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCCAAACCAGCTCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTTGGAGGAAAGTGGAGTaGGTGAAGTGGATTTCAGAA +
Preference number: 4 (lower is better)
Translates to: GFCGFQVWSQERSPKIPSWRKVE*VKWISE
Trigger: TTCTGAAATCCACTTCACCCACTCCACTTTCCTCCA...AGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTGAGGTATAGAAGTGACTCCTaGTGTCCTTTCACCCTCAGA +
Preference number: 4 (lower is better)
Translates to: AGQEWNYWGCFLNSANLRYRSDS*CPFTLR
Trigger: TCTGAGGGTGAAAGGACACCAGGAGTCACTTCTATA...CCTCAAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GCTTCAAAGCATACACAGTATCAGGGATGTGATGGCATCTGGGCAGAGCCTATAGGCAGAGCCTATACTTaGGCTAACTCTCCTCCAACA +
Preference number: 4 (lower is better)
Translates to: ASKHTQYQGCDGIWAEPIGRAYT*ANSPPT
Trigger: TGTTGGAGGAGAGTTAGCCCAAGTATAGGCTCTGCC...TATAGGCTCTGCCCAGATGCCATCACATCCCTGATACTGTGTATGCTTTGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp ATCATTGGGAAGAACTTAAGAGCCGTGAGATTTATGGGGTTGGAACATCCAGGGCTTCCTGGATGGAGGTaGTCTGGTTGTTCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: IIGKNLRAVRFMGLEHPGLPGWR*SGCSGS
Trigger: ACTTCCAGAACAACCAGATCACCTCCATCCAGGAAG...CCCTGGATGTTCCAACCCCATAAATCTCACGGCTCTTAAGTTCTTCCCAATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp GCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTGAGGACTTTTGAAGTTCCATaGCCTCAGATCATTGGGAAG +
Preference number: 4 (lower is better)
Translates to: AGQEWNYWGCFLNSANLRTFEVP*PQIIGK
Trigger: CTTCCCAATGATCTGAGGTCATGGAACTTCAAAAGT...CCTCAAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp GCTTCAAAGCATACACAGTATCAGGGATGTGATGGCATCTGGGCAGAGCCTATATGCCCATGCCACTTTTaGAGTTCCATGACCTCAGAT +
Preference number: 4 (lower is better)
Translates to: ASKHTQYQGCDGIWAEPICPCHF*SSMTSD
Trigger: ATCTGAGGTCATGGAACTTCAAAAGTGGCATGGGCA...TATAGGCTCTGCCCAGATGCCATCACATCCCTGATACTGTGTATGCTTTGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp GCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTGAGGTCCCACATCAGGTCATaGATATTATCATCATGCTGG +
Preference number: 4 (lower is better)
Translates to: AGQEWNYWGCFLNSANLRSHIRS*ILSSCW
Trigger: CCAGCATGATGATAATATTCATGACCTGATGTGGGA...CCTCAAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp GGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTTTAGGACAAACCAGGTaGAACAGATTAACCACATCC +
Preference number: 4 (lower is better)
Translates to: GFCGFQVWSQERSPKIPSLGQTR*NRLTTS
Trigger: GGATGTGGTTAATCTGTTTCACCTGGTTTGTCCTAA...AGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp GCTTCAAAGCATACACAGTATCAGGGATGTGATGGCATCTGGGCAGAGCCTATATCGGAGCTCCTTTGTTaGAATGAGCTGGTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: ASKHTQYQGCDGIWAEPISELLC*NELVWL
Trigger: AAGCCAAACCAGCTCATTTCAACAAAGGAGCTCCGA...TATAGGCTCTGCCCAGATGCCATCACATCCCTGATACTGTGTATGCTTTGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp TATATTTTGAGAAGCAACAAATGGGAGCCCAGAGTAACTGCACGACCAGCCCAGGGATGCTGTTTGGAATaGAGAAAGTGCTGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: YILRSNKWEPRVTARPAQGCCLE*RKCWAR
Trigger: TCTTGCCCAGCACTTTCTGCATTCCAAACAGCATCC...CTGGGCTGGTCGTGCAGTTACTCTGGGCTCCCATTTGTTGCTTCTCAAAATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp GCTTCAAAGCATACACAGTATCAGGGATGTGATGGCATCTGGGCAGAGCCTATAGGATGCTGTTTGGAATaGAGAAAGTGCTGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: ASKHTQYQGCDGIWAEPIGCCLE*RKCWAR
Trigger: TCTTGCCCAGCACTTTCTGCATTCCAAACAGCATCC...TATAGGCTCTGCCCAGATGCCATCACATCCCTGATACTGTGTATGCTTTGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp GGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTAAAACCCAGGTAGGATaGTGTTTGGAATGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: GFCGFQVWSQERSPKIPSKTQVG*CLECRK
Trigger: CTTTCTGCATTCCAAACAGCATCCTACCTGGGTTTT...AGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp GCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTGAGGAAAACCCAGGTAGGATaGTGTTTGGAATGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: AGQEWNYWGCFLNSANLRKTQVG*CLECRK
Trigger: CTTTCTGCATTCCAAACAGCATCCTACCTGGGTTTT...CCTCAAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp CAAAGTCTGGCCTTTCCTCTTCTGAAGTCTTATCCACCTTCAAAGAGCTACCCAGTGTTCACATGCAGATaGTTTCTGAAGAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: QSLAFPLLKSYPPSKSYPVFTCR*FLKSPG
Trigger: CCCAGGGCTCTTCAGAAAGCATCTGCATGTGAACAC...TGGGTAGCTCTTTGAAGGTGGATAAGACTTCAGAAGAGGAAAGGCCAGACTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp GCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTGAGGGCATTTGCTGATCACTaGTTATGCACTAGCATCATC +
Preference number: 4 (lower is better)
Translates to: AGQEWNYWGCFLNSANLRAFADH*LCTSII
Trigger: GATGATGCTAGTGCATAAGCAGTGATCAGCAAATGC...CCTCAAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647586.1
CDS-3UTR CCA 90 bp GAAATGAGCTGGTTTGGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTTTATCACTGGTGATCTaGTTGCCGTGGAGAGCAATC +
Preference number: 4 (lower is better)
Translates to: EMSWFGFCGFQVWSQERSLSLVI*LPWRAI
Trigger: GATTGCTCTCCACGGCAACCAGATCACCAGTGATAA...ACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCCAAACCAGCTCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp TTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTTCCGAATGCAGAAAGTGCTaGGCAAGAATGGAACTACTG +
Preference number: 4 (lower is better)
Translates to: FCGFQVWSQERSPKIPSSECRKC*ARMELL
Trigger: CAGTAGTTCCATTCTTGCCCAGCACTTTCTGCATTC...GGAAGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GACAGCCAGGGATTGTTAGAAAAGTATGGTTATATACTATTGCCCATGCCACTTGTGATCTGGTTGCCGTaGAGAGCAATCCAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: DSQGLLEKYGYILLPMPLVIWLP*RAIQSS
Trigger: GCTGCTCTGGATTGCTCTCCACGGCAACCAGATCAC...AAGTGGCATGGGCAATAGTATATAACCATACTTTTCTAACAATCCCTGGCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GACAGCCAGGGATTGTTAGAAAAGTATGGTTATATACTATTGCCCATGCCACTTCAGGTTGGTGTTGACTaGGGGGATCTTCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: DSQGLLEKYGYILLPMPLQVGVD*GDLLQL
Trigger: CAGCTGCAGAAGATCCCCCCAGTCAACACCAACCTG...AAGTGGCATGGGCAATAGTATATAACCATACTTTTCTAACAATCCCTGGCTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GACAGCCAGGGATTGTTAGAAAAGTATGGTTATATACTATTGCCCATGCCACTTGCAGCACCTGCAGCTTaGAGAAGTTCACGACGTCCA +
Preference number: 4 (lower is better)
Translates to: DSQGLLEKYGYILLPMPLAAPAA*RSSRRP
Trigger: TGGACGTCGTGAACTTCTCCAAGCTGCAGGTGCTGC...AAGTGGCATGGGCAATAGTATATAACCATACTTTTCTAACAATCCCTGGCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp TATATTTTGAGAAGCAACAAATGGGAGCCCAGAGTAACTGCACGACCAGCCCAGCAAGAATGGAACTACTaGGGCTGCTTTCTCAACTCA +
Preference number: 4 (lower is better)
Translates to: YILRSNKWEPRVTARPAQQEWNY*GCFLNS
Trigger: TGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTG...CTGGGCTGGTCGTGCAGTTACTCTGGGCTCCCATTTGTTGCTTCTCAAAATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp CAAAGTCTGGCCTTTCCTCTTCTGAAGTCTTATCCACCTTCAAAGAGCTACCCATGGCCGCTACCTTTGTaGATAAAAACCCAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: QSLAFPLLKSYPPSKSYPWPLPL*IKTQVG
Trigger: TCCTACCTGGGTTTTTATCCACAAAGGTAGCGGCCA...TGGGTAGCTCTTTGAAGGTGGATAAGACTTCAGAAGAGGAAAGGCCAGACTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp ATCATTGGGAAGAACTTAAGAGCCGTGAGATTTATGGGGTTGGAACATCCAGGGTGGCCGCTACCTTTGTaGATAAAAACCCAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: IIGKNLRAVRFMGLEHPGWPLPL*IKTQVG
Trigger: TCCTACCTGGGTTTTTATCCACAAAGGTAGCGGCCA...CCCTGGATGTTCCAACCCCATAAATCTCACGGCTCTTAAGTTCTTCCCAATGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CAA 72 bp ATTGGGAAGAACTTAAGAGCCGTGAGATTTATGGGGTaGGAACATCCAGGGATCCTTCCATCTACCACCACT +
Preference number: 4 (lower is better)
Translates to: IGKNLRAVRFMG*EHPGILPSTTT
Trigger: AGTGGTGGTAGATGGAAGGATCCCTGGATGTTCCAACCCCATAAATCTCACGGCTCTTAAGTTCTTCCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp ATCATTGGGAAGAACTTAAGAGCCGTGAGATTTATGGGGTTGGAACATCCAGGGTATAGCCCTATACATTaGTCTAAGCCTGAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: IIGKNLRAVRFMGLEHPGYSPIH*SKPEVG
Trigger: GCCAACCTCAGGCTTAGATCAATGTATAGGGCTATA...CCCTGGATGTTCCAACCCCATAAATCTCACGGCTCTTAAGTTCTTCCCAATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp CAAAGTCTGGCCTTTCCTCTTCTGAAGTCTTATCCACCTTCAAAGAGCTACCCATATAGCTCAGAGATGTaGAAGCAGAGGGTTGTATGC +
Preference number: 4 (lower is better)
Translates to: QSLAFPLLKSYPPSKSYPYSSEM*KQRVVC
Trigger: GCATACAACCCTCTGCTTTCACATCTCTGAGCTATA...TGGGTAGCTCTTTGAAGGTGGATAAGACTTCAGAAGAGGAAAGGCCAGACTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp AAGTGCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTATGATGGTGTTCACATaGAGATGCTTTCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: KCWARMELLGLLSQLSQFMMVFT*RCFLKS
Trigger: GCTCTTCAGAAAGCATCTGCATGTGAACACCATCAT...AAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp TATATTTTGAGAAGCAACAAATGGGAGCCCAGAGTAACTGCACGACCAGCCCAGATGATGGTGTTCACATaGAGATGCTTTCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: YILRSNKWEPRVTARPAQMMVFT*RCFLKS
Trigger: GCTCTTCAGAAAGCATCTGCATGTGAACACCATCAT...CTGGGCTGGTCGTGCAGTTACTCTGGGCTCCCATTTGTTGCTTCTCAAAATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GCTTCAAAGCATACACAGTATCAGGGATGTGATGGCATCTGGGCAGAGCCTATAATGACCTCAGATCATTaGGAAGAACTTAAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: ASKHTQYQGCDGIWAEPIMTSDH*EELKSR
Trigger: ACGGCTCTTAAGTTCTTCCCAATGATCTGAGGTCAT...TATAGGCTCTGCCCAGATGCCATCACATCCCTGATACTGTGTATGCTTTGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp ATCATTGGGAAGAACTTAAGAGCCGTGAGATTTATGGGGTTGGAACATCCAGGGTTGAGAAGCAACAAATaGGAGCCCAGAGTAACTGCA +
Preference number: 4 (lower is better)
Translates to: IIGKNLRAVRFMGLEHPGLRSNK*EPRVTA
Trigger: TGCAGTTACTCTGGGCTCCCATTTGTTGCTTCTCAA...CCCTGGATGTTCCAACCCCATAAATCTCACGGCTCTTAAGTTCTTCCCAATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GACAGCCAGGGATTGTTAGAAAAGTATGGTTATATACTATTGCCCATGCCACTTCACATCCTCCTTCTTTaGGCTAGCAAGTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: DSQGLLEKYGYILLPMPLHILLL*ASKSRA
Trigger: AGCCCTGGACTTGCTAGCCCAAAGAAGGAGGATGTG...AAGTGGCATGGGCAATAGTATATAACCATACTTTTCTAACAATCCCTGGCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp ATCATTGGGAAGAACTTAAGAGCCGTGAGATTTATGGGGTTGGAACATCCAGGGTCCCACATCAGGTCATaGATATTATCATCATGCTGG +
Preference number: 4 (lower is better)
Translates to: IIGKNLRAVRFMGLEHPGSHIRS*ILSSCW
Trigger: CCAGCATGATGATAATATTCATGACCTGATGTGGGA...CCCTGGATGTTCCAACCCCATAAATCTCACGGCTCTTAAGTTCTTCCCAATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp TATATTTTGAGAAGCAACAAATGGGAGCCCAGAGTAACTGCACGACCAGCCCAGGTGATCTGGTTGTTCTaGAAGTACACATACTTCATG +
Preference number: 4 (lower is better)
Translates to: YILRSNKWEPRVTARPAQVIWLF*KYTYFM
Trigger: CATGAAGTATGTGTACTTCCAGAACAACCAGATCAC...CTGGGCTGGTCGTGCAGTTACTCTGGGCTCCCATTTGTTGCTTCTCAAAATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GACAGCCAGGGATTGTTAGAAAAGTATGGTTATATACTATTGCCCATGCCACTTAGGCCAGGCCATTGTTaGTTAGACTGTTGTGGGACA +
Preference number: 4 (lower is better)
Translates to: DSQGLLEKYGYILLPMPLRPGHC*LDCCGT
Trigger: TGTCCCACAACAGTCTAACCAACAATGGCCTGGCCT...AAGTGGCATGGGCAATAGTATATAACCATACTTTTCTAACAATCCCTGGCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CCA 90 bp GACAGCCAGGGATTGTTAGAAAAGTATGGTTATATACTATTGCCCATGCCACTTGGCAGAGCCTATACTTaGGCTAACTCTCCTCCAACA +
Preference number: 4 (lower is better)
Translates to: DSQGLLEKYGYILLPMPLGRAYT*ANSPPT
Trigger: TGTTGGAGGAGAGTTAGCCCAAGTATAGGCTCTGCC...AAGTGGCATGGGCAATAGTATATAACCATACTTTTCTAACAATCCCTGGCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CAA 72 bp GAGAGCTGTCAAGTGCTGCTCACAGACAGCCAGGGATaGTTAGAAAAGTATGGTTATATACTATTGCCCATG +
Preference number: 4 (lower is better)
Translates to: ESCQVLLTDSQG*LEKYGYILLPM
Trigger: CATGGGCAATAGTATATAACCATACTTTTCTAACAATCCCTGGCTGTCTGTGAGCAGCACTTGACAGCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CAA 72 bp CTACCTTTGTGGATAAAAACCCAGGTAGGATGCTGTTaGGAATGCAGAAAGTGCTGGGCAAGAATGGAACTA +
Preference number: 4 (lower is better)
Translates to: LPLWIKTQVGCC*ECRKCWARMEL
Trigger: TAGTTCCATTCTTGCCCAGCACTTTCTGCATTCCAAACAGCATCCTACCTGGGTTTTTATCCACAAAGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp ATCATTGGGAAGAACTTAAGAGCCGTGAGATTTATGGGGTTGGAACATCCAGGGTCCTTTATAAAGGCATaGTGGTGTTCACATGCAGAT +
Preference number: 4 (lower is better)
Translates to: IIGKNLRAVRFMGLEHPGSFIKA*WCSHAD
Trigger: ATCTGCATGTGAACACCATCATGCCTTTATAAAGGA...CCCTGGATGTTCCAACCCCATAAATCTCACGGCTCTTAAGTTCTTCCCAATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp ATAGCTCAGAGATGTGAAAGCAGAGGGTTGTATGCCCAGCACAGGCAAGATTTGGATATAGAATCTTCCTaGTTGGATAAAAGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: IAQRCESRGLYAQHRQDLDIESS*LDKRRG
Trigger: TCCTCTCCTTTTATCCAAGCAGGAAGATTCTATATC...CAAATCTTGCCTGTGCTGGGCATACAACCCTCTGCTTTCACATCTCTGAGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR GCA 90 bp GAAATGAGCTGGTTTGGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTGATATAGAATCTTCCTaGTTGGATAAAAGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: EMSWFGFCGFQVWSQERSDIESS*LDKRRG
Trigger: TCCTCTCCTTTTATCCAAGCAGGAAGATTCTATATC...ACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCCAAACCAGCTCATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CAA 72 bp GTTTCTCATACTTTAAAAACCATGTGGCCGCTACCTTaGTGGATAAAAACCCAGGTAGGATGCTGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: VSHTLKTMWPLP*WIKTQVGCCLE
Trigger: TTCCAAACAGCATCCTACCTGGGTTTTTATCCACAAAGGTAGCGGCCACATGGTTTTTAAAGTATGAGAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR TCA 90 bp GACAGCCAGGGATTGTTAGAAAAGTATGGTTATATACTATTGCCCATGCCACTTTCCTTTATAAAGGCATaGTGGTGTTCACATGCAGAT +
Preference number: 4 (lower is better)
Translates to: DSQGLLEKYGYILLPMPLSFIKA*WCSHAD
Trigger: ATCTGCATGTGAACACCATCATGCCTTTATAAAGGA...AAGTGGCATGGGCAATAGTATATAACCATACTTTTCTAACAATCCCTGGCTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CAA 72 bp AGCCAGGGATTGTTAGAAAAGTATGGTTATATACTATaGCCCATGCCACTTTTGAAGTTCCATGACCTCAGA +
Preference number: 4 (lower is better)
Translates to: SQGLLEKYGYIL*PMPLLKFHDLR
Trigger: TCTGAGGTCATGGAACTTCAAAAGTGGCATGGGCAATAGTATATAACCATACTTTTCTAACAATCCCTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CAA 72 bp GTCTGTCTCTACCATCAGGATATAGAATCTTCCTGCTaGGATAAAAGGAGAGGACAAACTGTGTTTCTCATA +
Preference number: 4 (lower is better)
Translates to: VCLYHQDIESSC*DKRRGQTVFLI
Trigger: TATGAGAAACACAGTTTGTCCTCTCCTTTTATCCAAGCAGGAAGATTCTATATCCTGATGGTAGAGACAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
3UTR CAA 72 bp GAAAAGTATGGTTATATACTATTGCCCATGCCACTTTaGAAGTTCCATGACCTCAGATCATTGGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: EKYGYILLPMPL*KFHDLRSLGRT
Trigger: AGTTCTTCCCAATGATCTGAGGTCATGGAACTTCAAAAGTGGCATGGGCAATAGTATATAACCATACTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS TCA 90 bp GGGCTCTCCGCCCAGTACCCGGTGCCAGGGCTGCTCAGATCTCGATaGGGCTGGCAAGGCGCAGGCAGAGGGGCGCGTCGGCAGGCATGG +
Preference number: 5 (lower is better)
Translates to: GLSAQYPVPGLLRSR*GWQGAGRGARRQAW
Trigger: CCATGCCTGCCGACGCGCCCCTCTGCCTGCGCCTTGCCAGCCTCATCGAGATCTGAGCAGCCCTGGCACCGGGTACTGGGCGGAGAGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354955.5
ENST00000461936.1
ENST00000647586.1
CDS GCA 90 bp GCCAAATGCCACGGGGGCTCTCCGCCCAGTACCCGGTGCCAGGGCTaGTCAGATCTCGATGAGGCTGGCAAGGCGCAGGCAGAGGGGCGC +
Preference number: 5 (lower is better)
Translates to: AKCHGGSPPSTRCQG*SDLDEAGKAQAEGR
Trigger: GCGCCCCTCTGCCTGCGCCTTGCCAGCCTCATCGAGATCTGAGCAGCCCTGGCACCGGGTACTGGGCGGAGAGCCCCCGTGGCATTTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354955.5
ENST00000461936.1
ENST00000647586.1
CDS TCA 90 bp CAAGGCGCAGGCAGAGGGGCGCGTCGGCAGGCATGGCGCTGCGCTTaGTCTCGTTCCCGTCCAGGCGCAGCACCTGCAGCTTGGAGAAGT +
Preference number: 5 (lower is better)
Translates to: QGAGRGARRQAWRCA*SRSRPGAAPAAWRS
Trigger: ACTTCTCCAAGCTGCAGGTGCTGCGCCTGGACGGGAACGAGATCAAGCGCAGCGCCATGCCTGCCGACGCGCCCCTCTGCCTGCGCCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354955.5
ENST00000461936.1
ENST00000493296.1
ENST00000647586.1
CDS TCA 90 bp AAGGCACAGAAGAGGCATCCGGTGCCAGGGCTGCTCAGATCTCGATaGGGCTGGCAAGGCGCAGGCAGAGGGGCGCGTCGGCAGGCATGG +
Preference number: 5 (lower is better)
Translates to: KAQKRHPVPGLLRSR*GWQGAGRGARRQAW
Trigger: CCATGCCTGCCGACGCGCCCCTCTGCCTGCGCCTTGCCAGCCTCATCGAGATCTGAGCAGCCCTGGCACCGGATGCCTCTTCTGTGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493296.1
CDS GCA 90 bp AACCATCAAGCCAAATGCCACGGGGGCTCTCCGCCCAGTACCCGGTaGCAGGGCTGCTCAGATCTCGATGAGGCTGGCAAGGCGCAGGCA +
Preference number: 5 (lower is better)
Translates to: NHQAKCHGGSPPSTR*QGCSDLDEAGKAQA
Trigger: TGCCTGCGCCTTGCCAGCCTCATCGAGATCTGAGCAGCCCTGGCACCGGGTACTGGGCGGAGAGCCCCCGTGGCATTTGGCTTGATGGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354955.5
ENST00000461936.1
ENST00000647586.1
CDS GCA 90 bp GGCATGGCGCTGCGCTTGATCTCGTTCCCGTCCAGGCGCAGCACCTaGAGCTTGGAGAAGTTCACGACGTCCACCACGGTGCAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: GMALRLISFPSRRST*SLEKFTTSTTVQKL
Trigger: CAGCTTCTGCACCGTGGTGGACGTCGTGAACTTCTCCAAGCTGCAGGTGCTGCGCCTGGACGGGAACGAGATCAAGCGCAGCGCCATGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354955.5
ENST00000461936.1
ENST00000493296.1
ENST00000647586.1
CDS CCA 90 bp TCCAGAGCATTGTTGGGGACCCGTGAGATCTGGTTGTGGTCGAGATaGAGCTCTCTCAGGGATCGAGGCAGGGGACCGGGCATCCGGGTC +
Preference number: 5 (lower is better)
Translates to: SRALLGTREIWLWSR*SSLRDRGRGPGIRV
Trigger: GACCCGGATGCCCGGTCCCCTGCCTCGATCCCTGAGAGAGCTCCATCTCGACCACAACCAGATCTCACGGGTCCCCAACAATGCTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp CCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGGCCATGGCCGTGGGGAAGTaGGGTGGGCAGTCGCACTCC +
Preference number: 5 (lower is better)
Translates to: PGLGFTDPSQSWYFLTMAMAVGK*GGQSHS
Trigger: GGAGTGCGACTGCCCACCCAACTTCCCCACGGCCAT...GGCCATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp AGAGCCTATACTTGGGCTAACTCTCCTCCAACAGTCCTTGCCCCTGACTGCCCAGGGCAGGGGGCAGCCTaGCCCCTCACATCGGAGCTC +
Preference number: 5 (lower is better)
Translates to: RAYTWANSPPTVLAPDCPGQGAA*PLTSEL
Trigger: GAGCTCCGATGTGAGGGGCAAGGCTGCCCCCTGCCC...TGGGCAGTCAGGGGCAAGGACTGTTGGAGGAGAGTTAGCCCAAGTATAGGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS TCA 90 bp GGCCGTGAGGTTCTCCAGCCCCTCCAGAGCATTGTTGGGGACCCGTaGGATCTGGTTGTGGTCGAGATGGAGCTCTCTCAGGGATCGAGG +
Preference number: 5 (lower is better)
Translates to: GREVLQPLQSIVGDP*DLVVVEMELSQGSR
Trigger: CCTCGATCCCTGAGAGAGCTCCATCTCGACCACAACCAGATCTCACGGGTCCCCAACAATGCTCTGGAGGGGCTGGAGAACCTCACGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp AGCCAAACCAAACCATCAAGCCAAATGCCACGGGGGCTCTCCGCCCAGTACCCGCGCAGCACCTGCAGCTaGGAGAAGTTCACGACGTCC +
Preference number: 5 (lower is better)
Translates to: SQTKPSSQMPRGLSAQYPRSTCS*EKFTTS
Trigger: GGACGTCGTGAACTTCTCCAAGCTGCAGGTGCTGCG...CGGGTACTGGGCGGAGAGCCCCCGTGGCATTTGGCTTGATGGTTTGGTTTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS TCA 90 bp TCTCCACAGGTTGCTGGGCAGATGCTCACATGCCTTGGGGTCTCCTaGCTCTGCTTAAGGCACAGAAGAGGCATCCGGTGCCAGGGCTGC +
Preference number: 5 (lower is better)
Translates to: SPQVAGQMLTCLGVS*LCLRHRRGIRCQGC
Trigger: GCAGCCCTGGCACCGGATGCCTCTTCTGTGCCTTAAGCAGAGTCAGGAGACCCCAAGGCATGTGAGCATCTGCCCAGCAACCTGTGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493296.1
CDS-3UTR CAA 90 bp AGCCAAACCAAACCATCAAGCCAAATGCCACGGGGGCTCTCCGCCCAGTACCCGATCCGGGTCAGGTTGTaGTGGTCCAGGTACAGCCTC +
Preference number: 5 (lower is better)
Translates to: SQTKPSSQMPRGLSAQYPIRVRL*WSRYSL
Trigger: GAGGCTGTACCTGGACCACAACAACCTGACCCGGAT...CGGGTACTGGGCGGAGAGCCCCCGTGGCATTTGGCTTGATGGTTTGGTTTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp CCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGGCCAGCCCCTCCAGAGCATaGTTGGGGACCCGTGAGATC +
Preference number: 5 (lower is better)
Translates to: PGLGFTDPSQSWYFLTMASPSRA*LGTREI
Trigger: GATCTCACGGGTCCCCAACAATGCTCTGGAGGGGCT...GGCCATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp AGCCAAACCAAACCATCAAGCCAAATGCCACGGGGGCTCTCCGCCCAGTACCCGAGGAGGCTGCTGGAATaGAAGGTGTTGGAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: SQTKPSSQMPRGLSAQYPRRLLE*KVLEAR
Trigger: CCTGGCCTCCAACACCTTCAATTCCAGCAGCCTCCT...CGGGTACTGGGCGGAGAGCCCCCGTGGCATTTGGCTTGATGGTTTGGTTTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp TATACTTGGGCTAACTCTCCTCCAACAGTCCTTGCCCCTGACTGCCCAGATGGCGGCATGGCGCTGCGCTaGATCTCGTTCCCGTCCAGG +
Preference number: 5 (lower is better)
Translates to: YTWANSPPTVLAPDCPDGGMALR*ISFPSR
Trigger: CCTGGACGGGAACGAGATCAAGCGCAGCGCCATGCC...GCCATCTGGGCAGTCAGGGGCAAGGACTGTTGGAGGAGAGTTAGCCCAAGTATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp CAACAAATGGGAGCCCAGAGTAACTGCACGACCAGCCCAGCACAGAGGGAGAGCCTCCTCCAACAGTCCTaGCCCCTGACTGCCCAGATG +
Preference number: 5 (lower is better)
Translates to: QQMGAQSNCTTSPAQRESLLQQS*PLTAQM
Trigger: CATCTGGGCAGTCAGGGGCAAGGACTGTTGGAGGAG...GCTCTCCCTCTGTGCTGGGCTGGTCGTGCAGTTACTCTGGGCTCCCATTTGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp CAACAAATGGGAGCCCAGAGTAACTGCACGACCAGCCCAGCACAGAGGGAGAGCAGCAGCCCTGTGGCATaGTCAAAGACGCCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: QQMGAQSNCTTSPAQRESSSPVA*SKTPSW
Trigger: CCAGGAAGGCGTCTTTGACAATGCCACAGGGCTGCT...GCTCTCCCTCTGTGCTGGGCTGGTCGTGCAGTTACTCTGGGCTCCCATTTGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp AGCCAAACCAAACCATCAAGCCAAATGCCACGGGGGCTCTCCGCCCAGTACCCGAGATGCTCACATGCCTaGGGGTCTCCTGACTCTGCT +
Preference number: 5 (lower is better)
Translates to: SQTKPSSQMPRGLSAQYPRCSHA*GSPDSA
Trigger: AGCAGAGTCAGGAGACCCCAAGGCATGTGAGCATCT...CGGGTACTGGGCGGAGAGCCCCCGTGGCATTTGGCTTGATGGTTTGGTTTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp AGCCAAACCAAACCATCAAGCCAAATGCCACGGGGGCTCTCCGCCCAGTACCCGGGTTGTCTCCACAGGTaGCTGGGCAGATGCTCACAT +
Preference number: 5 (lower is better)
Translates to: SQTKPSSQMPRGLSAQYPGCLHR*LGRCSH
Trigger: ATGTGAGCATCTGCCCAGCAACCTGTGGAGACAACC...CGGGTACTGGGCGGAGAGCCCCCGTGGCATTTGGCTTGATGGTTTGGTTTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS CCA 90 bp GTGTGGGTTGTCTCCACAGGTTGCTGGGCAGATGCTCACATGCCTTaGGGTCTCCTGACTCTGCTTAAGGCACAGAAGAGGCATCCGGTG +
Preference number: 5 (lower is better)
Translates to: VWVVSTGCWADAHMP*GLLTLLKAQKRHPV
Trigger: CACCGGATGCCTCTTCTGTGCCTTAAGCAGAGTCAGGAGACCCCAAGGCATGTGAGCATCTGCCCAGCAACCTGTGGAGACAACCCACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493296.1
CDS-3UTR CAA 90 bp TATACTTGGGCTAACTCTCCTCCAACAGTCCTTGCCCCTGACTGCCCAGATGGCCCCTCCAGAGCATTGTaGGGGACCCGTGAGATCTGG +
Preference number: 5 (lower is better)
Translates to: YTWANSPPTVLAPDCPDGPSRAL*GTREIW
Trigger: CCAGATCTCACGGGTCCCCAACAATGCTCTGGAGGG...GCCATCTGGGCAGTCAGGGGCAAGGACTGTTGGAGGAGAGTTAGCCCAAGTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp GCTGCCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATAGGAGGCTGCTGGAATaGAAGGTGTTGGAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: AAWPGLHGPQPELVLFNYRRLLE*KVLEAR
Trigger: CCTGGCCTCCAACACCTTCAATTCCAGCAGCCTCCT...ATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp GCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTGAGGGGCATGGCGCTGCGCTaGATCTCGTTCCCGTCCAGG +
Preference number: 5 (lower is better)
Translates to: AGQEWNYWGCFLNSANLRGMALR*ISFPSR
Trigger: CCTGGACGGGAACGAGATCAAGCGCAGCGCCATGCC...CCTCAAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp CAACAAATGGGAGCCCAGAGTAACTGCACGACCAGCCCAGCACAGAGGGAGAGCGATCTAAGCCTGAGGTaGGCTGTCTCCTCCCACATC +
Preference number: 5 (lower is better)
Translates to: QQMGAQSNCTTSPAQRESDLSLR*AVSSHI
Trigger: GATGTGGGAGGAGACAGCCAACCTCAGGCTTAGATC...GCTCTCCCTCTGTGCTGGGCTGGTCGTGCAGTTACTCTGGGCTCCCATTTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp ATAGCTCAGAGATGTGAAAGCAGAGGGTTGTATGCCCAGCACAGGCAAGATTTGGGGCAGGGGGCAGCCTaGCCCCTCACATCGGAGCTC +
Preference number: 5 (lower is better)
Translates to: IAQRCESRGLYAQHRQDLGQGAA*PLTSEL
Trigger: GAGCTCCGATGTGAGGGGCAAGGCTGCCCCCTGCCC...CAAATCTTGCCTGTGCTGGGCATACAACCCTCTGCTTTCACATCTCTGAGCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp AGCCAAACCAAACCATCAAGCCAAATGCCACGGGGGCTCTCCGCCCAGTACCCGTACTTGAGGTTGCGATaGTCACAGTACATGGCCGTG +
Preference number: 5 (lower is better)
Translates to: SQTKPSSQMPRGLSAQYPYLRLR*SQYMAV
Trigger: CACGGCCATGTACTGTGACAATCGCAACCTCAAGTA...CGGGTACTGGGCGGAGAGCCCCCGTGGCATTTGGCTTGATGGTTTGGTTTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp AGCCAAACCAAACCATCAAGCCAAATGCCACGGGGGCTCTCCGCCCAGTACCCGGGCAGGTACTTGAGGTaGCGATTGTCACAGTACATG +
Preference number: 5 (lower is better)
Translates to: SQTKPSSQMPRGLSAQYPGRYLR*RLSQYM
Trigger: CATGTACTGTGACAATCGCAACCTCAAGTACCTGCC...CGGGTACTGGGCGGAGAGCCCCCGTGGCATTTGGCTTGATGGTTTGGTTTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp CAACAAATGGGAGCCCAGAGTAACTGCACGACCAGCCCAGCACAGAGGGAGAGCACGAAGGGCAGGTACTaGAGGTTGCGATTGTCACAG +
Preference number: 5 (lower is better)
Translates to: QQMGAQSNCTTSPAQRESTKGRY*RLRLSQ
Trigger: CTGTGACAATCGCAACCTCAAGTACCTGCCCTTCGT...GCTCTCCCTCTGTGCTGGGCTGGTCGTGCAGTTACTCTGGGCTCCCATTTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp CTGCCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGTCACTGGTGATCTGGTaGCCGTGGAGAGCAATCCAG +
Preference number: 5 (lower is better)
Translates to: LPGLGFTDPSQSWYFLTMSLVIW*PWRAIQ
Trigger: CTGGATTGCTCTCCACGGCAACCAGATCACCAGTGA...CATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp GCTGCCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATACCCGTGAGATCTGGTaGTGGTCGAGATGGAGCTCT +
Preference number: 5 (lower is better)
Translates to: AAWPGLHGPQPELVLFNYTREIW*WSRWSS
Trigger: AGAGCTCCATCTCGACCACAACCAGATCTCACGGGT...ATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp AGCCAAACCAAACCATCAAGCCAAATGCCACGGGGGCTCTCCGCCCAGTACCCGCAGGTAGGATGCTGTTaGGAATGCAGAAAGTGCTGG +
Preference number: 5 (lower is better)
Translates to: SQTKPSSQMPRGLSAQYPQVGCC*ECRKCW
Trigger: CCAGCACTTTCTGCATTCCAAACAGCATCCTACCTG...CGGGTACTGGGCGGAGAGCCCCCGTGGCATTTGGCTTGATGGTTTGGTTTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp GTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTTCCCTTCCAGCACAGGCAAGATTaGGCTGCCTGGCCTGGGCTT +
Preference number: 5 (lower is better)
Translates to: VDSRSGAKNVVQRSPLPFQHRQD*AAWPGL
Trigger: AAGCCCAGGCCAGGCAGCCAAATCTTGCCTGTGCTG...GAAGGGAAGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp CAACAAATGGGAGCCCAGAGTAACTGCACGACCAGCCCAGCACAGAGGGAGAGCTGTGAAAGCAGAGGGTaGTATGCCCAGCACAGGCAA +
Preference number: 5 (lower is better)
Translates to: QQMGAQSNCTTSPAQRESCESRG*YAQHRQ
Trigger: TTGCCTGTGCTGGGCATACAACCCTCTGCTTTCACA...GCTCTCCCTCTGTGCTGGGCTGGTCGTGCAGTTACTCTGGGCTCCCATTTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS CCA 90 bp GCTCGTAGGTCTCATACGGGTAAGGGTCATAGGGATCGTAGTAGGTaGACTGCTGGCTGCGGAGGTAGTGGAACCACCAATGAGGGTCAT +
Preference number: 5 (lower is better)
Translates to: ARRSHTGKGHRDRSR*TAGCGGSGTTNEGH
Trigger: ATGACCCTCATTGGTGGTTCCACTACCTCCGCAGCCAGCAGTCCACCTACTACGATCCCTATGACCCTTACCCGTATGAGACCTACGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354955.5
CDS CCA 90 bp CTCAGCTTGGAGAAGACCTTCCTGCCCACCTTATCACTGGTGATCTaGTTGCCGTGGAGAGCAATCCAGAGCAGCCCTGTGGCATTGTCA +
Preference number: 5 (lower is better)
Translates to: LSLEKTFLPTLSLVI*LPWRAIQSSPVALS
Trigger: TGACAATGCCACAGGGCTGCTCTGGATTGCTCTCCACGGCAACCAGATCACCAGTGATAAGGTGGGCAGGAAGGTCTTCTCCAAGCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp CTGCCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGCTGGATCTCATTGTGTaGGAGGTACAAGGCCGTGAG +
Preference number: 5 (lower is better)
Translates to: LPGLGFTDPSQSWYFLTMLDLIV*EVQGRE
Trigger: CTCACGGCCTTGTACCTCCAACACAATGAGATCCAG...CATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp GCTCACATGCCTTGGGGTCTCCTGACTCTGCTTAAGGCACAGAAGAGGCATCTGGAGGCCAGGCCATTGTaGGTTAGACTGTTGTGGGAC +
Preference number: 5 (lower is better)
Translates to: AHMPWGLLTLLKAQKRHLEARPL*VRLLWD
Trigger: GTCCCACAACAGTCTAACCAACAATGGCCTGGCCTC...CAGATGCCTCTTCTGTGCCTTAAGCAGAGTCAGGAGACCCCAAGGCATGTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp CTGCCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGGGTGTGTTTGGCCCATaGCAGATGCTGATGGTAAGC +
Preference number: 5 (lower is better)
Translates to: LPGLGFTDPSQSWYFLTMGVFGP*QMLMVS
Trigger: GCTTACCATCAGCATCTGCAATGGGCCAAACACACC...CATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp GGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGGCCTTAACTGCCCAGATGGCTTaGTCCCAACCTTGCCCAAAG +
Preference number: 5 (lower is better)
Translates to: GLGFTDPSQSWYFLTMALTAQMA*SQPCPK
Trigger: CTTTGGGCAAGGTTGGGACAAAGCCATCTGGGCAGT...TAAGGCCATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp TATACTTGGGCTAACTCTCCTCCAACAGTCCTTGCCCCTGACTGCCCAGATGGCACTGCCCAGATGGCTTaGTCCCAACCTTGCCCAAAG +
Preference number: 5 (lower is better)
Translates to: YTWANSPPTVLAPDCPDGTAQMA*SQPCPK
Trigger: CTTTGGGCAAGGTTGGGACAAAGCCATCTGGGCAGT...GCCATCTGGGCAGTCAGGGGCAAGGACTGTTGGAGGAGAGTTAGCCCAAGTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp GCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTGAGGCTCCTCCAACAGTCCTaGCCCCTGACTGCCCAGATG +
Preference number: 5 (lower is better)
Translates to: AGQEWNYWGCFLNSANLRLLQQS*PLTAQM
Trigger: CATCTGGGCAGTCAGGGGCAAGGACTGTTGGAGGAG...CCTCAAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp CATGATGGTGTTCACATGCAGATGCTTTCTGAAGAGCCCTGGGGCAGGGGGCAGGAGCTGGTTTGGCTTTaGTGGATTCCAGGTCTGGAG +
Preference number: 5 (lower is better)
Translates to: HDGVHMQMLSEEPWGRGQELVWL*WIPGLE
Trigger: CTCCAGACCTGGAATCCACAAAAGCCAAACCAGCTC...CTGCCCCCTGCCCCAGGGCTCTTCAGAAAGCATCTGCATGTGAACACCATCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS TCA 90 bp GGAAGTACACATACTTCATGCGGGAGGGAACGAAGGGCAGGTACTTaGGGTTGCGATTGTCACAGTACATGGCCGTGGGGAAGTTGGGTG +
Preference number: 5 (lower is better)
Translates to: GSTHTSCGRERRAGT*GCDCHSTWPWGSWV
Trigger: CACCCAACTTCCCCACGGCCATGTACTGTGACAATCGCAACCTCAAGTACCTGCCCTTCGTTCCCTCCCGCATGAAGTATGTGTACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS TCA 90 bp GCAGCTGGTTGTAGGAGAGGTCTAGCTCAAGGAGGCTGCTGGAATTaGAGGTGTTGGAGGCCAGGCCATTGTTGGTTAGACTGTTGTGGG +
Preference number: 5 (lower is better)
Translates to: AAGCRRGLAQGGCWN*RCWRPGHCWLDCCG
Trigger: CCCACAACAGTCTAACCAACAATGGCCTGGCCTCCAACACCTTCAATTCCAGCAGCCTCCTTGAGCTAGACCTCTCCTACAACCAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS GCA 90 bp CATACGGGTAAGGGTCATAGGGATCGTAGTAGGTGGACTGCTGGCTaGGGAGGTAGTGGAACCACCAATGAGGGTCATCTTCATACTGGG +
Preference number: 5 (lower is better)
Translates to: HTGKGHRDRSRWTAG*GGSGTTNEGHLHTG
Trigger: CCCAGTATGAAGATGACCCTCATTGGTGGTTCCACTACCTCCGCAGCCAGCAGTCCACCTACTACGATCCCTATGACCCTTACCCGTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354955.5
CDS-3UTR CAA 90 bp GCTCACATGCCTTGGGGTCTCCTGACTCTGCTTAAGGCACAGAAGAGGCATCTGACGAAGGGCAGGTACTaGAGGTTGCGATTGTCACAG +
Preference number: 5 (lower is better)
Translates to: AHMPWGLLTLLKAQKRHLTKGRY*RLRLSQ
Trigger: CTGTGACAATCGCAACCTCAAGTACCTGCCCTTCGT...CAGATGCCTCTTCTGTGCCTTAAGCAGAGTCAGGAGACCCCAAGGCATGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp GCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTGAGGATCCGGGTCAGGTTGTaGTGGTCCAGGTACAGCCTC +
Preference number: 5 (lower is better)
Translates to: AGQEWNYWGCFLNSANLRIRVRL*WSRYSL
Trigger: GAGGCTGTACCTGGACCACAACAACCTGACCCGGAT...CCTCAAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp AGAGCCTATACTTGGGCTAACTCTCCTCCAACAGTCCTTGCCCCTGACTGCCCACTGGATCTCATTGTGTaGGAGGTACAAGGCCGTGAG +
Preference number: 5 (lower is better)
Translates to: RAYTWANSPPTVLAPDCPLDLIV*EVQGRE
Trigger: CTCACGGCCTTGTACCTCCAACACAATGAGATCCAG...TGGGCAGTCAGGGGCAAGGACTGTTGGAGGAGAGTTAGCCCAAGTATAGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp GCTCACATGCCTTGGGGTCTCCTGACTCTGCTTAAGGCACAGAAGAGGCATCTGCTGGAATTGAAGGTGTaGGAGGCCAGGCCATTGTTG +
Preference number: 5 (lower is better)
Translates to: AHMPWGLLTLLKAQKRHLLELKV*EARPLL
Trigger: CAACAATGGCCTGGCCTCCAACACCTTCAATTCCAG...CAGATGCCTCTTCTGTGCCTTAAGCAGAGTCAGGAGACCCCAAGGCATGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp TATACTTGGGCTAACTCTCCTCCAACAGTCCTTGCCCCTGACTGCCCAGATGGCCTGGAATTGAAGGTGTaGGAGGCCAGGCCATTGTTG +
Preference number: 5 (lower is better)
Translates to: YTWANSPPTVLAPDCPDGLELKV*EARPLL
Trigger: CAACAATGGCCTGGCCTCCAACACCTTCAATTCCAG...GCCATCTGGGCAGTCAGGGGCAAGGACTGTTGGAGGAGAGTTAGCCCAAGTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp CAACAAATGGGAGCCCAGAGTAACTGCACGACCAGCCCAGCACAGAGGGAGAGCCTGATGGAGAACTCATaGATCCTATTGCCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: QQMGAQSNCTTSPAQRESLMENS*ILLPWR
Trigger: CCTCCAAGGCAATAGGATCAATGAGTTCTCCATCAG...GCTCTCCCTCTGTGCTGGGCTGGTCGTGCAGTTACTCTGGGCTCCCATTTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp TATACTTGGGCTAACTCTCCTCCAACAGTCCTTGCCCCTGACTGCCCAGATGGCTGTGAAAGCAGAGGGTaGTATGCCCAGCACAGGCAA +
Preference number: 5 (lower is better)
Translates to: YTWANSPPTVLAPDCPDGCESRG*YAQHRQ
Trigger: TTGCCTGTGCTGGGCATACAACCCTCTGCTTTCACA...GCCATCTGGGCAGTCAGGGGCAAGGACTGTTGGAGGAGAGTTAGCCCAAGTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS CCA 90 bp GGTTATAACTCAGGTCCAGCAAGATCAGTGACCGGAGGCCCCTCATaGAACTGCCCACTTCCTGGATCTCATTGTGTTGGAGGTACAAGG +
Preference number: 5 (lower is better)
Translates to: GYNSGPARSVTGGPS*NCPLPGSHCVGGTR
Trigger: CCTTGTACCTCCAACACAATGAGATCCAGGAAGTGGGCAGTTCCATGAGGGGCCTCCGGTCACTGATCTTGCTGGACCTGAGTTATAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp GCTCACATGCCTTGGGGTCTCCTGACTCTGCTTAAGGCACAGAAGAGGCATCTGTACTTGAGGTTGCGATaGTCACAGTACATGGCCGTG +
Preference number: 5 (lower is better)
Translates to: AHMPWGLLTLLKAQKRHLYLRLR*SQYMAV
Trigger: CACGGCCATGTACTGTGACAATCGCAACCTCAAGTA...CAGATGCCTCTTCTGTGCCTTAAGCAGAGTCAGGAGACCCCAAGGCATGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp GGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTACCCGTGAGATCTGGTaGTGGTCGAGATGGAGCTCT +
Preference number: 5 (lower is better)
Translates to: GFCGFQVWSQERSPKIPSTREIW*WSRWSS
Trigger: AGAGCTCCATCTCGACCACAACCAGATCTCACGGGT...AGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp AGGTGTGTTTGGCCCATTGCAGATGCTGATGGTAAGCAAAGTCTGGCCTTTCCTCAGACACAGTGTGGGTaGTCTCCACAGGTTGCTGGG +
Preference number: 5 (lower is better)
Translates to: RCVWPIADADGKQSLAFPQTQCG*SPQVAG
Trigger: CCCAGCAACCTGTGGAGACAACCCACACTGTGTCTG...AGGAAAGGCCAGACTTTGCTTACCATCAGCATCTGCAATGGGCCAAACACACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp GCTTCAAAGCATACACAGTATCAGGGATGTGATGGCATCTGGGCAGAGCCTATACAGCACAGGCAAGATTaGGCTGCCTGGCCTGGGCTT +
Preference number: 5 (lower is better)
Translates to: ASKHTQYQGCDGIWAEPIQHRQD*AAWPGL
Trigger: AAGCCCAGGCCAGGCAGCCAAATCTTGCCTGTGCTG...TATAGGCTCTGCCCAGATGCCATCACATCCCTGATACTGTGTATGCTTTGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS TCA 90 bp AGAGCAGCCCTGTGGCATTGTCAAAGACGCCTTCCTGGATGGAGGTaGTCTGGTTGTTCTGGAAGTACACATACTTCATGCGGGAGGGAA +
Preference number: 5 (lower is better)
Translates to: RAALWHCQRRLPGWR*SGCSGSTHTSCGRE
Trigger: TTCCCTCCCGCATGAAGTATGTGTACTTCCAGAACAACCAGATCACCTCCATCCAGGAAGGCGTCTTTGACAATGCCACAGGGCTGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS CCA 90 bp AGCCCTGTGGCATTGTCAAAGACGCCTTCCTGGATGGAGGTGATCTaGTTGTTCTGGAAGTACACATACTTCATGCGGGAGGGAACGAAG +
Preference number: 5 (lower is better)
Translates to: SPVALSKTPSWMEVI*LFWKYTYFMREGTK
Trigger: CTTCGTTCCCTCCCGCATGAAGTATGTGTACTTCCAGAACAACCAGATCACCTCCATCCAGGAAGGCGTCTTTGACAATGCCACAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp CTGCCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGATGGAGGTGATCTGGTaGTTCTGGAAGTACACATAC +
Preference number: 5 (lower is better)
Translates to: LPGLGFTDPSQSWYFLTMMEVIW*FWKYTY
Trigger: GTATGTGTACTTCCAGAACAACCAGATCACCTCCAT...CATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp CAAAGTCTGGCCTTTCCTCTTCTGAAGTCTTATCCACCTTCAAAGAGCTACCCAAGCCCCTCCAGAGCATaGTTGGGGACCCGTGAGATC +
Preference number: 5 (lower is better)
Translates to: QSLAFPLLKSYPPSKSYPSPSRA*LGTREI
Trigger: GATCTCACGGGTCCCCAACAATGCTCTGGAGGGGCT...TGGGTAGCTCTTTGAAGGTGGATAAGACTTCAGAAGAGGAAAGGCCAGACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp GTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTTCCCTTCTTGTTGGTTAGACTGTaGTGGGACAGCCGCACATAC +
Preference number: 5 (lower is better)
Translates to: VDSRSGAKNVVQRSPLPFLLVRL*WDSRTY
Trigger: GTATGTGCGGCTGTCCCACAACAGTCTAACCAACAA...GAAGGGAAGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp CAAAGTCTGGCCTTTCCTCTTCTGAAGTCTTATCCACCTTCAAAGAGCTACCCACGCAGCACCTGCAGCTaGGAGAAGTTCACGACGTCC +
Preference number: 5 (lower is better)
Translates to: QSLAFPLLKSYPPSKSYPRSTCS*EKFTTS
Trigger: GGACGTCGTGAACTTCTCCAAGCTGCAGGTGCTGCG...TGGGTAGCTCTTTGAAGGTGGATAAGACTTCAGAAGAGGAAAGGCCAGACTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp GGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGGCCTTATTGCCCATGCCACTTTaGAAGTTCCATGACCTCAGA +
Preference number: 5 (lower is better)
Translates to: GLGFTDPSQSWYFLTMALLPMPL*KFHDLR
Trigger: TCTGAGGTCATGGAACTTCAAAAGTGGCATGGGCAA...TAAGGCCATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp TATACTTGGGCTAACTCTCCTCCAACAGTCCTTGCCCCTGACTGCCCAGATGGCTTGCCCATGCCACTTTaGAAGTTCCATGACCTCAGA +
Preference number: 5 (lower is better)
Translates to: YTWANSPPTVLAPDCPDGLPMPL*KFHDLR
Trigger: TCTGAGGTCATGGAACTTCAAAAGTGGCATGGGCAA...GCCATCTGGGCAGTCAGGGGCAAGGACTGTTGGAGGAGAGTTAGCCCAAGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp CAACAAATGGGAGCCCAGAGTAACTGCACGACCAGCCCAGCACAGAGGGAGAGCGGCAAGAGGTATATTTaGAGAAGCAACAAATGGGAG +
Preference number: 5 (lower is better)
Translates to: QQMGAQSNCTTSPAQRESGKRYI*RSNKWE
Trigger: CTCCCATTTGTTGCTTCTCAAAATATACCTCTTGCC...GCTCTCCCTCTGTGCTGGGCTGGTCGTGCAGTTACTCTGGGCTCCCATTTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp ATAGCTCAGAGATGTGAAAGCAGAGGGTTGTATGCCCAGCACAGGCAAGATTTGCAGACACAGTGTGGGTaGTCTCCACAGGTTGCTGGG +
Preference number: 5 (lower is better)
Translates to: IAQRCESRGLYAQHRQDLQTQCG*SPQVAG
Trigger: CCCAGCAACCTGTGGAGACAACCCACACTGTGTCTG...CAAATCTTGCCTGTGCTGGGCATACAACCCTCTGCTTTCACATCTCTGAGCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp GGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTGGTGTGTTTGGCCCATaGCAGATGCTGATGGTAAGC +
Preference number: 5 (lower is better)
Translates to: GFCGFQVWSQERSPKIPSGVFGP*QMLMVS
Trigger: GCTTACCATCAGCATCTGCAATGGGCCAAACACACC...AGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp GCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTGAGGGGCAGGTACTTGAGGTaGCGATTGTCACAGTACATG +
Preference number: 5 (lower is better)
Translates to: AGQEWNYWGCFLNSANLRGRYLR*RLSQYM
Trigger: CATGTACTGTGACAATCGCAACCTCAAGTACCTGCC...CCTCAAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp TGGAATGCAGAAAGTGCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTTGGAGGCCAGGCCATaGTTGGTTAGACTGTTGTGG +
Preference number: 5 (lower is better)
Translates to: WNAESAGQEWNYWGCFLNLEARP*LVRLLW
Trigger: CCACAACAGTCTAACCAACAATGGCCTGGCCTCCAA...GTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGCACTTTCTGCATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp TATATTTTGAGAAGCAACAAATGGGAGCCCAGAGTAACTGCACGACCAGCCCAGAGATGCTCACATGCCTaGGGGTCTCCTGACTCTGCT +
Preference number: 5 (lower is better)
Translates to: YILRSNKWEPRVTARPAQRCSHA*GSPDSA
Trigger: AGCAGAGTCAGGAGACCCCAAGGCATGTGAGCATCT...CTGGGCTGGTCGTGCAGTTACTCTGGGCTCCCATTTGTTGCTTCTCAAAATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp GCTTCAAAGCATACACAGTATCAGGGATGTGATGGCATCTGGGCAGAGCCTATAGATCTAAGCCTGAGGTaGGCTGTCTCCTCCCACATC +
Preference number: 5 (lower is better)
Translates to: ASKHTQYQGCDGIWAEPIDLSLR*AVSSHI
Trigger: GATGTGGGAGGAGACAGCCAACCTCAGGCTTAGATC...TATAGGCTCTGCCCAGATGCCATCACATCCCTGATACTGTGTATGCTTTGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp GGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCCAAAGATCCCCTCTCAGGGACTCCAGCATTaGCTGATCACTGCTTATGCA +
Preference number: 5 (lower is better)
Translates to: GFCGFQVWSQERSPKIPSQGLQH*LITAYA
Trigger: TGCATAAGCAGTGATCAGCAAATGCTGGAGTCCCTG...AGAGGGGATCTTTGGACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647586.1
CDS CCA 90 bp AGAGCAATCCAGAGCAGCCCTGTGGCATTGTCAAAGACGCCTTCCTaGATGGAGGTGATCTGGTTGTTCTGGAAGTACACATACTTCATG +
Preference number: 5 (lower is better)
Translates to: RAIQSSPVALSKTPS*MEVIWLFWKYTYFM
Trigger: CATGAAGTATGTGTACTTCCAGAACAACCAGATCACCTCCATCCAGGAAGGCGTCTTTGACAATGCCACAGGGCTGCTCTGGATTGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp AAGTGCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTTTGGAGGCCAGGCCATaGTTGGTTAGACTGTTGTGG +
Preference number: 5 (lower is better)
Translates to: KCWARMELLGLLSQLSQFLEARP*LVRLLW
Trigger: CCACAACAGTCTAACCAACAATGGCCTGGCCTCCAA...AAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGCACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp ATCATTGGGAAGAACTTAAGAGCCGTGAGATTTATGGGGTTGGAACATCCAGGGGGTTGTCTCCACAGGTaGCTGGGCAGATGCTCACAT +
Preference number: 5 (lower is better)
Translates to: IIGKNLRAVRFMGLEHPGGCLHR*LGRCSH
Trigger: ATGTGAGCATCTGCCCAGCAACCTGTGGAGACAACC...CCCTGGATGTTCCAACCCCATAAATCTCACGGCTCTTAAGTTCTTCCCAATGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp GCTGCCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATATAGAATCTTCCTGCTaGGATAAAAGGAGAGGACAA +
Preference number: 5 (lower is better)
Translates to: AAWPGLHGPQPELVLFNYIESSC*DKRRGQ
Trigger: TTGTCCTCTCCTTTTATCCAAGCAGGAAGATTCTAT...ATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGGCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp GAAATGAGCTGGTTTGGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTGAGCTGGTTTGGCTTTaGTGGATTCCAGGTCTGGAG +
Preference number: 5 (lower is better)
Translates to: EMSWFGFCGFQVWSQERSELVWL*WIPGLE
Trigger: CTCCAGACCTGGAATCCACAAAAGCCAAACCAGCTC...ACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCCAAACCAGCTCATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp ATAGCTCAGAGATGTGAAAGCAGAGGGTTGTATGCCCAGCACAGGCAAGATTTGTTGTTGGTTAGACTGTaGTGGGACAGCCGCACATAC +
Preference number: 5 (lower is better)
Translates to: IAQRCESRGLYAQHRQDLLLVRL*WDSRTY
Trigger: GTATGTGCGGCTGTCCCACAACAGTCTAACCAACAA...CAAATCTTGCCTGTGCTGGGCATACAACCCTCTGCTTTCACATCTCTGAGCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp ATAGCTCAGAGATGTGAAAGCAGAGGGTTGTATGCCCAGCACAGGCAAGATTTGCAGGTAGGATGCTGTTaGGAATGCAGAAAGTGCTGG +
Preference number: 5 (lower is better)
Translates to: IAQRCESRGLYAQHRQDLQVGCC*ECRKCW
Trigger: CCAGCACTTTCTGCATTCCAAACAGCATCCTACCTG...CAAATCTTGCCTGTGCTGGGCATACAACCCTCTGCTTTCACATCTCTGAGCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp GAAATGAGCTGGTTTGGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTATTGATCCTATTGCCTaGGAGGTAGAGGTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: EMSWFGFCGFQVWSQERSIDPIA*EVEVLQ
Trigger: CTGGAGAACCTCTACCTCCAAGGCAATAGGATCAAT...ACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCCAAACCAGCTCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp GAAATGAGCTGGTTTGGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTCTGATGGAGAACTCATaGATCCTATTGCCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: EMSWFGFCGFQVWSQERSLMENS*ILLPWR
Trigger: CCTCCAAGGCAATAGGATCAATGAGTTCTCCATCAG...ACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCCAAACCAGCTCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp ATAGCTCAGAGATGTGAAAGCAGAGGGTTGTATGCCCAGCACAGGCAAGATTTGGTGAGATTTATGGGGTaGGAACATCCAGGGATCCTT +
Preference number: 5 (lower is better)
Translates to: IAQRCESRGLYAQHRQDLVRFMG*EHPGIL
Trigger: AAGGATCCCTGGATGTTCCAACCCCATAAATCTCAC...CAAATCTTGCCTGTGCTGGGCATACAACCCTCTGCTTTCACATCTCTGAGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp ATAGCTCAGAGATGTGAAAGCAGAGGGTTGTATGCCCAGCACAGGCAAGATTTGATGTGGCCGCTACCTTaGTGGATAAAAACCCAGGTA +
Preference number: 5 (lower is better)
Translates to: IAQRCESRGLYAQHRQDLMWPLP*WIKTQV
Trigger: TACCTGGGTTTTTATCCACAAAGGTAGCGGCCACAT...CAAATCTTGCCTGTGCTGGGCATACAACCCTCTGCTTTCACATCTCTGAGCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp AGGTGTGTTTGGCCCATTGCAGATGCTGATGGTAAGCAAAGTCTGGCCTTTCCTGAGGTCCACTGCATTTaGTCTCTCAAGTTGAACTTT +
Preference number: 5 (lower is better)
Translates to: RCVWPIADADGKQSLAFPEVHCI*SLKLNF
Trigger: AAAGTTCAACTTGAGAGACAAAATGCAGTGGACCTC...AGGAAAGGCCAGACTTTGCTTACCATCAGCATCTGCAATGGGCCAAACACACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354955.5
CDS-3UTR CAA 90 bp GACAGCCAGGGATTGTTAGAAAAGTATGGTTATATACTATTGCCCATGCCACTTTCACTGGTGATCTGGTaGCCGTGGAGAGCAATCCAG +
Preference number: 5 (lower is better)
Translates to: DSQGLLEKYGYILLPMPLSLVIW*PWRAIQ
Trigger: CTGGATTGCTCTCCACGGCAACCAGATCACCAGTGA...AAGTGGCATGGGCAATAGTATATAACCATACTTTTCTAACAATCCCTGGCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp ATCATTGGGAAGAACTTAAGAGCCGTGAGATTTATGGGGTTGGAACATCCAGGGATGTGGCCGCTACCTTaGTGGATAAAAACCCAGGTA +
Preference number: 5 (lower is better)
Translates to: IIGKNLRAVRFMGLEHPGMWPLP*WIKTQV
Trigger: TACCTGGGTTTTTATCCACAAAGGTAGCGGCCACAT...CCCTGGATGTTCCAACCCCATAAATCTCACGGCTCTTAAGTTCTTCCCAATGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp AAGTGCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTGGCAAGAGGTATATTTaGAGAAGCAACAAATGGGAG +
Preference number: 5 (lower is better)
Translates to: KCWARMELLGLLSQLSQFGKRYI*RSNKWE
Trigger: CTCCCATTTGTTGCTTCTCAAAATATACCTCTTGCC...AAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp AAGTGCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTACAGACAGCCAGGGATaGTTAGAAAAGTATGGTTAT +
Preference number: 5 (lower is better)
Translates to: KCWARMELLGLLSQLSQFTDSQG*LEKYGY
Trigger: ATAACCATACTTTTCTAACAATCCCTGGCTGTCTGT...AAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp GAAATGAGCTGGTTTGGCTTTTGTGGATTCCAGGTCTGGAGCCAAGAACGTAGTACAGACAGCCAGGGATaGTTAGAAAAGTATGGTTAT +
Preference number: 5 (lower is better)
Translates to: EMSWFGFCGFQVWSQERSTDSQG*LEKYGY
Trigger: ATAACCATACTTTTCTAACAATCCCTGGCTGTCTGT...ACTACGTTCTTGGCTCCAGACCTGGAATCCACAAAAGCCAAACCAGCTCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp AAGTGCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTATAGAATCTTCCTGCTaGGATAAAAGGAGAGGACAA +
Preference number: 5 (lower is better)
Translates to: KCWARMELLGLLSQLSQFIESSC*DKRRGQ
Trigger: TTGTCCTCTCCTTTTATCCAAGCAGGAAGATTCTAT...AAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp TATATTTTGAGAAGCAACAAATGGGAGCCCAGAGTAACTGCACGACCAGCCCAGATTTTGTCTCTCAAGTaGAACTTTTCAGAGAGTGAC +
Preference number: 5 (lower is better)
Translates to: YILRSNKWEPRVTARPAQILSLK*NFSESD
Trigger: GTCACTCTCTGAAAAGTTCAACTTGAGAGACAAAAT...CTGGGCTGGTCGTGCAGTTACTCTGGGCTCCCATTTGTTGCTTCTCAAAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354955.5
CDS-3UTR CAA 90 bp GACAGCCAGGGATTGTTAGAAAAGTATGGTTATATACTATTGCCCATGCCACTTATTGATCCTATTGCCTaGGAGGTAGAGGTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: DSQGLLEKYGYILLPMPLIDPIA*EVEVLQ
Trigger: CTGGAGAACCTCTACCTCCAAGGCAATAGGATCAAT...AAGTGGCATGGGCAATAGTATATAACCATACTTTTCTAACAATCCCTGGCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp AAGTGCTGGGCAAGAATGGAACTACTGGGGCTGCTTTCTCAACTCAGCCAATTTTATGGTTATATACTATaGCCCATGCCACTTTTGAAG +
Preference number: 5 (lower is better)
Translates to: KCWARMELLGLLSQLSQFYGYIL*PMPLLK
Trigger: CTTCAAAAGTGGCATGGGCAATAGTATATAACCATA...AAATTGGCTGAGTTGAGAAAGCAGCCCCAGTAGTTCCATTCTTGCCCAGCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp GACAGCCAGGGATTGTTAGAAAAGTATGGTTATATACTATTGCCCATGCCACTTATGGAGGTGATCTGGTaGTTCTGGAAGTACACATAC +
Preference number: 5 (lower is better)
Translates to: DSQGLLEKYGYILLPMPLMEVIW*FWKYTY
Trigger: GTATGTGTACTTCCAGAACAACCAGATCACCTCCAT...AAGTGGCATGGGCAATAGTATATAACCATACTTTTCTAACAATCCCTGGCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS-3UTR CAA 90 bp CAAAGTCTGGCCTTTCCTCTTCTGAAGTCTTATCCACCTTCAAAGAGCTACCCATATGGTTATATACTATaGCCCATGCCACTTTTGAAG +
Preference number: 5 (lower is better)
Translates to: QSLAFPLLKSYPPSKSYPYGYIL*PMPLLK
Trigger: CTTCAAAAGTGGCATGGGCAATAGTATATAACCATA...TGGGTAGCTCTTTGAAGGTGGATAAGACTTCAGAAGAGGAAAGGCCAGACTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS TCA 72 bp GGCAGAGGGGCGCGTCGGCAGGCATGGCGCTGCGCTTaGTCTCGTTCCCGTCCAGGCGCAGCACCTGCAGCT +
Preference number: 6 (lower is better)
Translates to: GRGARRQAWRCA*SRSRPGAAPAA
Trigger: AGCTGCAGGTGCTGCGCCTGGACGGGAACGAGATCAAGCGCAGCGCCATGCCTGCCGACGCGCCCCTCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354955.5
ENST00000461936.1
ENST00000493296.1
ENST00000647586.1
CDS TCA 72 bp GCCCAGTACCCGGTGCCAGGGCTGCTCAGATCTCGATaGGGCTGGCAAGGCGCAGGCAGAGGGGCGCGTCGG +
Preference number: 6 (lower is better)
Translates to: AQYPVPGLLRSR*GWQGAGRGARR
Trigger: CCGACGCGCCCCTCTGCCTGCGCCTTGCCAGCCTCATCGAGATCTGAGCAGCCCTGGCACCGGGTACTGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354955.5
ENST00000461936.1
ENST00000647586.1
CDS CAA 72 bp AGGCAGAGGGGCGCGTCGGCAGGCATGGCGCTGCGCTaGATCTCGTTCCCGTCCAGGCGCAGCACCTGCAGC +
Preference number: 6 (lower is better)
Translates to: RQRGASAGMALR*ISFPSRRSTCS
Trigger: GCTGCAGGTGCTGCGCCTGGACGGGAACGAGATCAAGCGCAGCGCCATGCCTGCCGACGCGCCCCTCTGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354955.5
ENST00000461936.1
ENST00000493296.1
ENST00000647586.1
CDS CAA 90 bp GCAAGGCGCAGGCAGAGGGGCGCGTCGGCAGGCATGGCGCTGCGCTaGATCTCGTTCCCGTCCAGGCGCAGCACCTGCAGCTTGGAGAAG +
Preference number: 6 (lower is better)
Translates to: ARRRQRGASAGMALR*ISFPSRRSTCSLEK
Trigger: CTTCTCCAAGCTGCAGGTGCTGCGCCTGGACGGGAACGAGATCAAGCGCAGCGCCATGCCTGCCGACGCGCCCCTCTGCCTGCGCCTTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354955.5
ENST00000461936.1
ENST00000493296.1
ENST00000647586.1
CDS GCA 72 bp CACGGGGGCTCTCCGCCCAGTACCCGGTGCCAGGGCTaGTCAGATCTCGATGAGGCTGGCAAGGCGCAGGCA +
Preference number: 6 (lower is better)
Translates to: HGGSPPSTRCQG*SDLDEAGKAQA
Trigger: TGCCTGCGCCTTGCCAGCCTCATCGAGATCTGAGCAGCCCTGGCACCGGGTACTGGGCGGAGAGCCCCCGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354955.5
ENST00000461936.1
ENST00000647586.1
CDS TCA 72 bp AAGAGGCATCCGGTGCCAGGGCTGCTCAGATCTCGATaGGGCTGGCAAGGCGCAGGCAGAGGGGCGCGTCGG +
Preference number: 6 (lower is better)
Translates to: KRHPVPGLLRSR*GWQGAGRGARR
Trigger: CCGACGCGCCCCTCTGCCTGCGCCTTGCCAGCCTCATCGAGATCTGAGCAGCCCTGGCACCGGATGCCTCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493296.1
CDS GCA 72 bp GCCAAATGCCACGGGGGCTCTCCGCCCAGTACCCGGTaGCAGGGCTGCTCAGATCTCGATGAGGCTGGCAAG +
Preference number: 6 (lower is better)
Translates to: AKCHGGSPPSTR*QGCSDLDEAGK
Trigger: CTTGCCAGCCTCATCGAGATCTGAGCAGCCCTGGCACCGGGTACTGGGCGGAGAGCCCCCGTGGCATTTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354955.5
ENST00000461936.1
ENST00000647586.1
CDS CCA 72 bp GGTTGCGATTGTCACAGTACATGGCCGTGGGGAAGTTaGGTGGGCAGTCGCACTCCTGGGGGCAGTCGCGGG +
Preference number: 6 (lower is better)
Translates to: GCDCHSTWPWGS*VGSRTPGGSRG
Trigger: CCCGCGACTGCCCCCAGGAGTGCGACTGCCCACCCAACTTCCCCACGGCCATGTACTGTGACAATCGCAACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS CAA 72 bp AGGTTGCGATTGTCACAGTACATGGCCGTGGGGAAGTaGGGTGGGCAGTCGCACTCCTGGGGGCAGTCGCGG +
Preference number: 6 (lower is better)
Translates to: RLRLSQYMAVGK*GGQSHSWGQSR
Trigger: CCGCGACTGCCCCCAGGAGTGCGACTGCCCACCCAACTTCCCCACGGCCATGTACTGTGACAATCGCAACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS CAA 90 bp GCGCTGCGCTTGATCTCGTTCCCGTCCAGGCGCAGCACCTGCAGCTaGGAGAAGTTCACGACGTCCACCACGGTGCAGAAGCTGCTGATG +
Preference number: 6 (lower is better)
Translates to: ALRLISFPSRRSTCS*EKFTTSTTVQKLLM
Trigger: CATCAGCAGCTTCTGCACCGTGGTGGACGTCGTGAACTTCTCCAAGCTGCAGGTGCTGCGCCTGGACGGGAACGAGATCAAGCGCAGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354955.5
ENST00000461936.1
ENST00000493296.1
ENST00000647586.1
CDS GCA 72 bp CTGCGCTTGATCTCGTTCCCGTCCAGGCGCAGCACCTaGAGCTTGGAGAAGTTCACGACGTCCACCACGGTG +
Preference number: 6 (lower is better)
Translates to: LRLISFPSRRST*SLEKFTTSTTV
Trigger: CACCGTGGTGGACGTCGTGAACTTCTCCAAGCTGCAGGTGCTGCGCCTGGACGGGAACGAGATCAAGCGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354955.5
ENST00000461936.1
ENST00000493296.1
ENST00000647586.1
CDS GCA 72 bp TGCTTAAGGCACAGAAGAGGCATCCGGTGCCAGGGCTaGTCAGATCTCGATGAGGCTGGCAAGGCGCAGGCA +
Preference number: 6 (lower is better)
Translates to: CLRHRRGIRCQG*SDLDEAGKAQA
Trigger: TGCCTGCGCCTTGCCAGCCTCATCGAGATCTGAGCAGCCCTGGCACCGGATGCCTCTTCTGTGCCTTAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493296.1
CDS CCA 72 bp GTGTTGGAGGCCAGGCCATTGTTGGTTAGACTGTTGTaGGACAGCCGCACATACAGCAGCTTGGGCGCCCCC +
Preference number: 6 (lower is better)
Translates to: VLEARPLLVRLL*DSRTYSSLGAP
Trigger: GGGGGCGCCCAAGCTGCTGTATGTGCGGCTGTCCCACAACAGTCTAACCAACAATGGCCTGGCCTCCAACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS CAA 72 bp CGGGAGGGAACGAAGGGCAGGTACTTGAGGTTGCGATaGTCACAGTACATGGCCGTGGGGAAGTTGGGTGGG +
Preference number: 6 (lower is better)
Translates to: REGTKGRYLRLR*SQYMAVGKLGG
Trigger: CCCACCCAACTTCCCCACGGCCATGTACTGTGACAATCGCAACCTCAAGTACCTGCCCTTCGTTCCCTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS CAA 72 bp AAGGCCGTGAGGTTCTCCAGCCCCTCCAGAGCATTGTaGGGGACCCGTGAGATCTGGTTGTGGTCGAGATGG +
Preference number: 6 (lower is better)
Translates to: KAVRFSSPSRAL*GTREIWLWSRW
Trigger: CCATCTCGACCACAACCAGATCTCACGGGTCCCCAACAATGCTCTGGAGGGGCTGGAGAACCTCACGGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS CAA 72 bp TTGATCTCGTTCCCGTCCAGGCGCAGCACCTGCAGCTaGGAGAAGTTCACGACGTCCACCACGGTGCAGAAG +
Preference number: 6 (lower is better)
Translates to: LISFPSRRSTCS*EKFTTSTTVQK
Trigger: CTTCTGCACCGTGGTGGACGTCGTGAACTTCTCCAAGCTGCAGGTGCTGCGCCTGGACGGGAACGAGATCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354955.5
ENST00000461936.1
ENST00000493296.1
ENST00000647586.1
CDS CAA 90 bp TGGAGGTACAAGGCCGTGAGGTTCTCCAGCCCCTCCAGAGCATTGTaGGGGACCCGTGAGATCTGGTTGTGGTCGAGATGGAGCTCTCTC +
Preference number: 6 (lower is better)
Translates to: WRYKAVRFSSPSRAL*GTREIWLWSRWSSL
Trigger: GAGAGAGCTCCATCTCGACCACAACCAGATCTCACGGGTCCCCAACAATGCTCTGGAGGGGCTGGAGAACCTCACGGCCTTGTACCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS CAA 90 bp TACTTCATGCGGGAGGGAACGAAGGGCAGGTACTTGAGGTTGCGATaGTCACAGTACATGGCCGTGGGGAAGTTGGGTGGGCAGTCGCAC +
Preference number: 6 (lower is better)
Translates to: YFMREGTKGRYLRLR*SQYMAVGKLGGQSH
Trigger: GTGCGACTGCCCACCCAACTTCCCCACGGCCATGTACTGTGACAATCGCAACCTCAAGTACCTGCCCTTCGTTCCCTCCCGCATGAAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS CAA 90 bp TGTTGGAGGTACAAGGCCGTGAGGTTCTCCAGCCCCTCCAGAGCATaGTTGGGGACCCGTGAGATCTGGTTGTGGTCGAGATGGAGCTCT +
Preference number: 6 (lower is better)
Translates to: CWRYKAVRFSSPSRA*LGTREIWLWSRWSS
Trigger: AGAGCTCCATCTCGACCACAACCAGATCTCACGGGTCCCCAACAATGCTCTGGAGGGGCTGGAGAACCTCACGGCCTTGTACCTCCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS CCA 72 bp AGCCCCTCCAGAGCATTGTTGGGGACCCGTGAGATCTaGTTGTGGTCGAGATGGAGCTCTCTCAGGGATCGA +
Preference number: 6 (lower is better)
Translates to: SPSRALLGTREI*LWSRWSSLRDR
Trigger: TCGATCCCTGAGAGAGCTCCATCTCGACCACAACCAGATCTCACGGGTCCCCAACAATGCTCTGGAGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS CCA 72 bp AGTGACCGGAGGCCCCTCATGGAACTGCCCACTTCCTaGATCTCATTGTGTTGGAGGTACAAGGCCGTGAGG +
Preference number: 6 (lower is better)
Translates to: SDRRPLMELPTS*ISLCWRYKAVR
Trigger: CCTCACGGCCTTGTACCTCCAACACAATGAGATCCAGGAAGTGGGCAGTTCCATGAGGGGCCTCCGGTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS CAA 72 bp TACAAGGCCGTGAGGTTCTCCAGCCCCTCCAGAGCATaGTTGGGGACCCGTGAGATCTGGTTGTGGTCGAGA +
Preference number: 6 (lower is better)
Translates to: YKAVRFSSPSRA*LGTREIWLWSR
Trigger: TCTCGACCACAACCAGATCTCACGGGTCCCCAACAATGCTCTGGAGGGGCTGGAGAACCTCACGGCCTTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS CAA 72 bp AAGGTGTTGGAGGCCAGGCCATTGTTGGTTAGACTGTaGTGGGACAGCCGCACATACAGCAGCTTGGGCGCC +
Preference number: 6 (lower is better)
Translates to: KVLEARPLLVRL*WDSRTYSSLGA
Trigger: GGCGCCCAAGCTGCTGTATGTGCGGCTGTCCCACAACAGTCTAACCAACAATGGCCTGGCCTCCAACACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS CCA 72 bp GAGAAGACCTTCCTGCCCACCTTATCACTGGTGATCTaGTTGCCGTGGAGAGCAATCCAGAGCAGCCCTGTG +
Preference number: 6 (lower is better)
Translates to: EKTFLPTLSLVI*LPWRAIQSSPV
Trigger: CACAGGGCTGCTCTGGATTGCTCTCCACGGCAACCAGATCACCAGTGATAAGGTGGGCAGGAAGGTCTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS CCA 72 bp CTCATGGAACTGCCCACTTCCTGGATCTCATTGTGTTaGAGGTACAAGGCCGTGAGGTTCTCCAGCCCCTCC +
Preference number: 6 (lower is better)
Translates to: LMELPTSWISLC*RYKAVRFSSPS
Trigger: GGAGGGGCTGGAGAACCTCACGGCCTTGTACCTCCAACACAATGAGATCCAGGAAGTGGGCAGTTCCATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS CCA 72 bp GCCTTGGAGGTAGAGGTTCTCCAGGTTGGTGTTGACTaGGGGGATCTTCTGCAGCTGGTTGTAGGAGAGGTC +
Preference number: 6 (lower is better)
Translates to: ALEVEVLQVGVD*GDLLQLVVGEV
Trigger: GACCTCTCCTACAACCAGCTGCAGAAGATCCCCCCAGTCAACACCAACCTGGAGAACCTCTACCTCCAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS CAA 72 bp TTGCCGTGGAGAGCAATCCAGAGCAGCCCTGTGGCATaGTCAAAGACGCCTTCCTGGATGGAGGTGATCTGG +
Preference number: 6 (lower is better)
Translates to: LPWRAIQSSPVA*SKTPSWMEVIW
Trigger: CCAGATCACCTCCATCCAGGAAGGCGTCTTTGACAATGCCACAGGGCTGCTCTGGATTGCTCTCCACGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS CAA 72 bp AGGCCCCTCATGGAACTGCCCACTTCCTGGATCTCATaGTGTTGGAGGTACAAGGCCGTGAGGTTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: RPLMELPTSWIS*CWRYKAVRFSS
Trigger: GCTGGAGAACCTCACGGCCTTGTACCTCCAACACAATGAGATCCAGGAAGTGGGCAGTTCCATGAGGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS CAA 90 bp TACACATACTTCATGCGGGAGGGAACGAAGGGCAGGTACTTGAGGTaGCGATTGTCACAGTACATGGCCGTGGGGAAGTTGGGTGGGCAG +
Preference number: 6 (lower is better)
Translates to: YTYFMREGTKGRYLR*RLSQYMAVGKLGGQ
Trigger: CTGCCCACCCAACTTCCCCACGGCCATGTACTGTGACAATCGCAACCTCAAGTACCTGCCCTTCGTTCCCTCCCGCATGAAGTATGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS CAA 90 bp TCAAGGAGGCTGCTGGAATTGAAGGTGTTGGAGGCCAGGCCATTGTaGGTTAGACTGTTGTGGGACAGCCGCACATACAGCAGCTTGGGC +
Preference number: 6 (lower is better)
Translates to: SRRLLELKVLEARPL*VRLLWDSRTYSSLG
Trigger: GCCCAAGCTGCTGTATGTGCGGCTGTCCCACAACAGTCTAACCAACAATGGCCTGGCCTCCAACACCTTCAATTCCAGCAGCCTCCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS TCA 72 bp CATACTTCATGCGGGAGGGAACGAAGGGCAGGTACTTaGGGTTGCGATTGTCACAGTACATGGCCGTGGGGA +
Preference number: 6 (lower is better)
Translates to: HTSCGRERRAGT*GCDCHSTWPWG
Trigger: TCCCCACGGCCATGTACTGTGACAATCGCAACCTCAAGTACCTGCCCTTCGTTCCCTCCCGCATGAAGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS GCA 72 bp CCAGCAAGATCAGTGACCGGAGGCCCCTCATGGAACTaGCCACTTCCTGGATCTCATTGTGTTGGAGGTACA +
Preference number: 6 (lower is better)
Translates to: PARSVTGGPSWN*PLPGSHCVGGT
Trigger: TGTACCTCCAACACAATGAGATCCAGGAAGTGGGCAGTTCCATGAGGGGCCTCCGGTCACTGATCTTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS CAA 72 bp TTCATGCGGGAGGGAACGAAGGGCAGGTACTTGAGGTaGCGATTGTCACAGTACATGGCCGTGGGGAAGTTG +
Preference number: 6 (lower is better)
Translates to: FMREGTKGRYLR*RLSQYMAVGKL
Trigger: CAACTTCCCCACGGCCATGTACTGTGACAATCGCAACCTCAAGTACCTGCCCTTCGTTCCCTCCCGCATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS CAA 72 bp ACATACTTCATGCGGGAGGGAACGAAGGGCAGGTACTaGAGGTTGCGATTGTCACAGTACATGGCCGTGGGG +
Preference number: 6 (lower is better)
Translates to: TYFMREGTKGRY*RLRLSQYMAVG
Trigger: CCCCACGGCCATGTACTGTGACAATCGCAACCTCAAGTACCTGCCCTTCGTTCCCTCCCGCATGAAGTATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS CAA 90 bp AGCTCAAGGAGGCTGCTGGAATTGAAGGTGTTGGAGGCCAGGCCATaGTTGGTTAGACTGTTGTGGGACAGCCGCACATACAGCAGCTTG +
Preference number: 6 (lower is better)
Translates to: SSRRLLELKVLEARP*LVRLLWDSRTYSSL
Trigger: CAAGCTGCTGTATGTGCGGCTGTCCCACAACAGTCTAACCAACAATGGCCTGGCCTCCAACACCTTCAATTCCAGCAGCCTCCTTGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS CAA 72 bp CTGCTGGAATTGAAGGTGTTGGAGGCCAGGCCATTGTaGGTTAGACTGTTGTGGGACAGCCGCACATACAGC +
Preference number: 6 (lower is better)
Translates to: LLELKVLEARPL*VRLLWDSRTYS
Trigger: GCTGTATGTGCGGCTGTCCCACAACAGTCTAACCAACAATGGCCTGGCCTCCAACACCTTCAATTCCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS CAA 90 bp TGGAAGTACACATACTTCATGCGGGAGGGAACGAAGGGCAGGTACTaGAGGTTGCGATTGTCACAGTACATGGCCGTGGGGAAGTTGGGT +
Preference number: 6 (lower is better)
Translates to: WKYTYFMREGTKGRY*RLRLSQYMAVGKLG
Trigger: ACCCAACTTCCCCACGGCCATGTACTGTGACAATCGCAACCTCAAGTACCTGCCCTTCGTTCCCTCCCGCATGAAGTATGTGTACTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS CAA 90 bp CCTGTGGCATTGTCAAAGACGCCTTCCTGGATGGAGGTGATCTGGTaGTTCTGGAAGTACACATACTTCATGCGGGAGGGAACGAAGGGC +
Preference number: 6 (lower is better)
Translates to: PVALSKTPSWMEVIW*FWKYTYFMREGTKG
Trigger: GCCCTTCGTTCCCTCCCGCATGAAGTATGTGTACTTCCAGAACAACCAGATCACCTCCATCCAGGAAGGCGTCTTTGACAATGCCACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS TCA 72 bp TGTAGGAGAGGTCTAGCTCAAGGAGGCTGCTGGAATTaGAGGTGTTGGAGGCCAGGCCATTGTTGGTTAGAC +
Preference number: 6 (lower is better)
Translates to: CRRGLAQGGCWN*RCWRPGHCWLD
Trigger: GTCTAACCAACAATGGCCTGGCCTCCAACACCTTCAATTCCAGCAGCCTCCTTGAGCTAGACCTCTCCTACA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS TCA 72 bp CTGCATTTTGTCTCTCAAGTTGAACTTTTCAGAGAGTaGCCACGTCCCTCTGTCTGGCCTCCTTGGGTTGGA +
Preference number: 6 (lower is better)
Translates to: LHFVSQVELFRE*PRPSVWPPWVG
Trigger: TCCAACCCAAGGAGGCCAGACAGAGGGACGTGGTCACTCTCTGAAAAGTTCAACTTGAGAGACAAAATGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354955.5
CDS CCA 72 bp GCATTGTCAAAGACGCCTTCCTGGATGGAGGTGATCTaGTTGTTCTGGAAGTACACATACTTCATGCGGGAG +
Preference number: 6 (lower is better)
Translates to: ALSKTPSWMEVI*LFWKYTYFMRE
Trigger: CTCCCGCATGAAGTATGTGTACTTCCAGAACAACCAGATCACCTCCATCCAGGAAGGCGTCTTTGACAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS CAA 72 bp TTGTCAAAGACGCCTTCCTGGATGGAGGTGATCTGGTaGTTCTGGAAGTACACATACTTCATGCGGGAGGGA +
Preference number: 6 (lower is better)
Translates to: LSKTPSWMEVIW*FWKYTYFMREG
Trigger: TCCCTCCCGCATGAAGTATGTGTACTTCCAGAACAACCAGATCACCTCCATCCAGGAAGGCGTCTTTGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS CAA 72 bp GAAGCTGCTGATGGAGAACTCATTGATCCTATTGCCTaGGAGGTAGAGGTTCTCCAGGTTGGTGTTGACTGG +
Preference number: 6 (lower is better)
Translates to: EAADGELIDPIA*EVEVLQVGVDW
Trigger: CCAGTCAACACCAACCTGGAGAACCTCTACCTCCAAGGCAATAGGATCAATGAGTTCTCCATCAGCAGCTTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS TCA 72 bp CTGTGGCATTGTCAAAGACGCCTTCCTGGATGGAGGTaGTCTGGTTGTTCTGGAAGTACACATACTTCATGC +
Preference number: 6 (lower is better)
Translates to: LWHCQRRLPGWR*SGCSGSTHTSC
Trigger: GCATGAAGTATGTGTACTTCCAGAACAACCAGATCACCTCCATCCAGGAAGGCGTCTTTGACAATGCCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354955.5
ENST00000647586.1
CDS TCA 72 bp AGAAGTTCACGACGTCCACCACGGTGCAGAAGCTGCTaGTGGAGAACTCTCAAGTTGAACTTTTCAGAGAGT +
Preference number: 6 (lower is better)
Translates to: RSSRRPPRCRSC*WRTLKLNFSES
Trigger: ACTCTCTGAAAAGTTCAACTTGAGAGTTCTCCATCAGCAGCTTCTGCACCGTGGTGGACGTCGTGAACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461936.1
ENST00000493296.1
CDS GCA 72 bp AAAGGAAAGGCAGGGACTCCAGCATTTGCTGATCACTaGTTATGCACTAGCATCATCCACTTCCACTTAATG +
Preference number: 6 (lower is better)
Translates to: KGKAGTPAFADH*LCTSIIHFHLM
Trigger: CATTAAGTGGAAGTGGATGATGCTAGTGCATAAGCAGTGATCAGCAAATGCTGGAGTCCCTGCCTTTCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647586.1