RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FMO1 (Homo sapiens)

Ensembl gene IDs: ENSG00000010932

Ensembl transcript IDs: ENST00000354841.4, ENST00000367750.7, ENST00000402921.6, ENST00000459868.1, ENST00000469112.5, ENST00000469711.1, ENST00000617670.6

Found 331 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGCCCAAGGGTTTGATGAGGCCAATAATGGCCAGGGTTGGCTTTTaGAGATGTGCAGGGAAGATATACTTGTACAGTGAGGCCTGGCCA +
Preference number: 1 (lower is better)
Translates to: EPKGLMRPIMARVGF*RCAGKIYLYSEAWP
Trigger: TGGCCAGGCCTCACTGTACAAGTATATCTTCCCTGCACATCTGCAAAAGCCAACCCTGGCCATTATTGGCCTCATCAAACCCTTGGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR CCA 90 bp ATTTCTCAACATGTTCTGAAAGCGTGTCATGAACACCATGTCCCATaGGTAGCCCGAGTCAAAGATTCGGCTGATCACCCATCCCCCTCC +
Preference number: 1 (lower is better)
Translates to: ISQHVLKACHEHHVP*VARVKDSADHPSPS
Trigger: GGAGGGGGATGGGTGATCAGCCGAATCTTTGACTCGGGCTACCCATGGGACATGGTGTTCATGACACGCTTTCAGAACATGTTGAGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR TCA 90 bp CAGGGTTGGCTTTTGCAGATGTGCAGGGAAGATATACTTGTACAGTaGGGCCTGGCCATCTTCAACTTTCACTACAGACTCATCAAGGAA +
Preference number: 1 (lower is better)
Translates to: QGWLLQMCREDILVQ*GLAIFNFHYRLIKE
Trigger: TTCCTTGATGAGTCTGTAGTGAAAGTTGAAGATGGCCAGGCCTCACTGTACAAGTATATCTTCCCTGCACATCTGCAAAAGCCAACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR GCA 90 bp ATTTCCAGTATCCAGAATCACATGGCACACCAAAAACACATGCCCTaGTATTTCTTATACTTACCTTTCAGGACTCGAACAGCCCACCGA +
Preference number: 1 (lower is better)
Translates to: ISSIQNHMAHQKHMP*YFLYLPFRTRTAHR
Trigger: TCGGTGGGCTGTTCGAGTCCTGAAAGGTAAGTATAAGAAATAGCAGGGCATGTGTTTTTGGTGTGCCATGTGATTCTGGATACTGGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR CCA 90 bp CCAGTTGTTTATCTTTCGCTCCATCAACCAAGTCACAATTGGGGTTaGGAGGGAATTTCTCAACATGTTCTGAAAGCGTGTCATGAACAC +
Preference number: 1 (lower is better)
Translates to: PVVYLSLHQPSHNWG*EGISQHVLKACHEH
Trigger: GTGTTCATGACACGCTTTCAGAACATGTTGAGAAATTCCCTCCCAACCCCAATTGTGACTTGGTTGATGGAGCGAAAGATAAACAACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR CCA 90 bp ATTGAGCCAGTTGTTTATCTTTCGCTCCATCAACCAAGTCACAATTaGGGTTGGGAGGGAATTTCTCAACATGTTCTGAAAGCGTGTCAT +
Preference number: 1 (lower is better)
Translates to: IEPVVYLSLHQPSHN*GWEGISQHVLKACH
Trigger: ATGACACGCTTTCAGAACATGTTGAGAAATTCCCTCCCAACCCCAATTGTGACTTGGTTGATGGAGCGAAAGATAAACAACTGGCTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR TCA 90 bp TCAGCTGAGTCCTGTCTTCTGGTATTAAGCCGTAATTTGCATGATTaGGCCAGTTGTTTATCTTTCGCTCCATCAACCAAGTCACAATTG +
Preference number: 1 (lower is better)
Translates to: SAESCLLVLSRNLHD*ASCLSFAPSTKSQL
Trigger: CAATTGTGACTTGGTTGATGGAGCGAAAGATAAACAACTGGCTCAATCATGCAAATTACGGCTTAATACCAGAAGACAGGACTCAGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR CCA 90 bp AAAAACCTCAAATGCAACTTAAGTTTAGGTCTAGCTGTTGACTTATaGATAAAGATGCTTTACTATGGCTCTCCTTTCACGTCTAGTACC +
Preference number: 1 (lower is better)
Translates to: KNLKCNLSLGLAVDL*IKMLYYGSPFTSST
Trigger: GGTACTAGACGTGAAAGGAGAGCCATAGTAAAGCATCTTTATCCATAAGTCAACAGCTAGACCTAAACTTAAGTTGCATTTGAGGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR-3UTR TCA 90 bp AGCTGGGAGAGGCTCAGGAATACCAGTGGTAGCCCTGGGGCCAGCCAGGGAAGCGATATACTTGTACAGTaGGGCCTGGCCATCTTCAAC +
Preference number: 2 (lower is better)
Translates to: SWERLRNTSGSPGASQGSDILVQ*GLAIFN
Trigger: GTTGAAGATGGCCAGGCCTCACTGTACAAGTATATC...GCTTCCCTGGCTGGCCCCAGGGCTACCACTGGTATTCCTGAGCCTCTCCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR-3UTR CCA 90 bp AGCTGGGAGAGGCTCAGGAATACCAGTGGTAGCCCTGGGGCCAGCCAGGGAAGCAGGGAAGCGAGAGGGTaGCCTTTACTATTTGAATAC +
Preference number: 2 (lower is better)
Translates to: SWERLRNTSGSPGASQGSREARG*PLLFEY
Trigger: GTATTCAAATAGTAAAGGCCACCCTCTCGCTTCCCT...GCTTCCCTGGCTGGCCCCAGGGCTACCACTGGTATTCCTGAGCCTCTCCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
3UTR-3UTR GCA 90 bp AGCTGGGAGAGGCTCAGGAATACCAGTGGTAGCCCTGGGGCCAGCCAGGGAAGCTATGATGGCTCAGAGTaGTGTCAAGAACAGCTTTCT +
Preference number: 2 (lower is better)
Translates to: SWERLRNTSGSPGASQGSYDGSE*CQEQLS
Trigger: AGAAAGCTGTTCTTGACAGCACTCTGAGCCATCATA...GCTTCCCTGGCTGGCCCCAGGGCTACCACTGGTATTCCTGAGCCTCTCCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
3UTR-3UTR CCA 90 bp AGCTGGGAGAGGCTCAGGAATACCAGTGGTAGCCCTGGGGCCAGCCAGGGAAGCAAAGGCATTAATACCTaGAAAGGAATCCAGTGGCAA +
Preference number: 2 (lower is better)
Translates to: SWERLRNTSGSPGASQGSKGINT*KGIQWQ
Trigger: TTGCCACTGGATTCCTTTCCAGGTATTAATGCCTTT...GCTTCCCTGGCTGGCCCCAGGGCTACCACTGGTATTCCTGAGCCTCTCCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR-3UTR CCA 90 bp TCTCAACATGTTCTGAAAGCGTGTCATGAACACCATGTCCCATGGGTAGCCCGAACCTTTTCCGCCAGGTaGCTGGCCTCCACAGCAATG +
Preference number: 2 (lower is better)
Translates to: SQHVLKACHEHHVPWVARTFSAR*LASTAM
Trigger: CATTGCTGTGGAGGCCAGCCACCTGGCGGAAAAGGT...TCGGGCTACCCATGGGACATGGTGTTCATGACACGCTTTCAGAACATGTTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR-3UTR TCA 90 bp ACAGTGAGGCCTGGCCATCTTCAACTTTCACTACAGACTCATCAAGGAAGGGGATCTGAAAGCGTGTCATaGACACCATGTCCCATGGGT +
Preference number: 2 (lower is better)
Translates to: TVRPGHLQLSLQTHQGRGSESVS*TPCPMG
Trigger: ACCCATGGGACATGGTGTTCATGACACGCTTTCAGA...TCCCCTTCCTTGATGAGTCTGTAGTGAAAGTTGAAGATGGCCAGGCCTCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR-3UTR GCA 90 bp ATGGTGAGCATGGGCCAAAGAAGACGGTCAGAGCCAGATGTGGATCCGTTAGGACCTATAAATAGCCACTaGACACTAGTCTGGACGAGA +
Preference number: 2 (lower is better)
Translates to: MVSMGQRRRSEPDVDPLGPINSH*TLVWTR
Trigger: TCTCGTCCAGACTAGTGTGCAGTGGCTATTTATAGG...TCCTAACGGATCCACATCTGGCTCTGACCGTCTTCTTTGGCCCATGCTCACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR-3UTR TCA 90 bp ATGGTGAGCATGGGCCAAAGAAGACGGTCAGAGCCAGATGTGGATCCGTTAGGAAGAGACAGCAGAATCTaGGCATTTTGTTACACTGCA +
Preference number: 2 (lower is better)
Translates to: MVSMGQRRRSEPDVDPLGRDSRI*AFCYTA
Trigger: TGCAGTGTAACAAAATGCTCAGATTCTGCTGTCTCT...TCCTAACGGATCCACATCTGGCTCTGACCGTCTTCTTTGGCCCATGCTCACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR-3UTR GCA 90 bp ATGGTGAGCATGGGCCAAAGAAGACGGTCAGAGCCAGATGTGGATCCGTTAGGAAGCATTTTGTTACACTaGAGACTTTGGTCTTGCCTG +
Preference number: 2 (lower is better)
Translates to: MVSMGQRRRSEPDVDPLGSILLH*RLWSCL
Trigger: CAGGCAAGACCAAAGTCTGCAGTGTAACAAAATGCT...TCCTAACGGATCCACATCTGGCTCTGACCGTCTTCTTTGGCCCATGCTCACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR-3UTR TCA 90 bp AGTATCCAGAATCACATGGCACACCAAAAACACATGCCCTGCTATTTCTTATACAGTCAAAGATTCGGCTaGTCACCCATCCCCCTCCGG +
Preference number: 2 (lower is better)
Translates to: SIQNHMAHQKHMPCYFLYSQRFG*SPIPLR
Trigger: CCGGAGGGGGATGGGTGATCAGCCGAATCTTTGACT...GTATAAGAAATAGCAGGGCATGTGTTTTTGGTGTGCCATGTGATTCTGGATACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR-3UTR TCA 90 bp TCTCAACATGTTCTGAAAGCGTGTCATGAACACCATGTCCCATGGGTAGCCCGATTATATTGCCGGCTATaGAAGTACTGGCCTTTAAAG +
Preference number: 2 (lower is better)
Translates to: SQHVLKACHEHHVPWVARLYCRL*KYWPLK
Trigger: CTTTAAAGGCCAGTACTTTCATAGCCGGCAATATAA...TCGGGCTACCCATGGGACATGGTGTTCATGACACGCTTTCAGAACATGTTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR-3UTR GCA 90 bp CCTGAGCTGACTGGTTGTATGCTCCTGGTAATAATGCCGTCAGCTGAAAAGATATCTTGCTTCTCTTCATaGATAGTGACCACCTCCCAT +
Preference number: 2 (lower is better)
Translates to: PELTGCMLLVIMPSAEKISCFSS*IVTTSH
Trigger: ATGGGAGGTGGTCACTATGCATGAAGAGAAGCAAGA...TATCTTTTCAGCTGACGGCATTATTACCAGGAGCATACAACCAGTCAGCTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR-3UTR CCA 90 bp ATAGTTTATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTGTGACCACCTCCCATTaGCCAGAGACAGCAGAATCT +
Preference number: 2 (lower is better)
Translates to: IVYMGKRYDGSECCQEQLVTTSH*PETAES
Trigger: AGATTCTGCTGTCTCTGGCCAATGGGAGGTGGTCAC...AAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATAAACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR-3UTR CCA 90 bp GGTCTAGCTGTTGACTTATGGATAAAGATGCTTTACTATGGCTCTCCTTTCACGGAACACCATGTCCCATaGGTAGCCCGAGTCAAAGAT +
Preference number: 2 (lower is better)
Translates to: GLAVDLWIKMLYYGSPFTEHHVP*VARVKD
Trigger: ATCTTTGACTCGGGCTACCCATGGGACATGGTGTTC...CGTGAAAGGAGAGCCATAGTAAAGCATCTTTATCCATAAGTCAACAGCTAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR-3UTR CCA 90 bp TTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCAGTGCAACCAAGTCACAATTaGGGTTGGGAGGGAATTTCT +
Preference number: 2 (lower is better)
Translates to: LSFSSIRSGAGRGSGIPVQPSHN*GWEGIS
Trigger: AGAAATTCCCTCCCAACCCCAATTGTGACTTGGTTG...CACTGGTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR-3UTR CCA 90 bp CTGACTGGTTGTATGCTCCTGGTAATAATGCCGTCAGCTGAAAAGATAAGCATCAGGGAAGCGAGAGGGTaGCCTTTACTATTTGAATAC +
Preference number: 2 (lower is better)
Translates to: LTGCMLLVIMPSAEKISIREARG*PLLFEY
Trigger: GTATTCAAATAGTAAAGGCCACCCTCTCGCTTCCCT...GATGCTTATCTTTTCAGCTGACGGCATTATTACCAGGAGCATACAACCAGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR-3UTR CCA 90 bp TTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCAGTGAGTCACAATTGGGGTTaGGAGGGAATTTCTCAACAT +
Preference number: 2 (lower is better)
Translates to: LSFSSIRSGAGRGSGIPVSHNWG*EGISQH
Trigger: ATGTTGAGAAATTCCCTCCCAACCCCAATTGTGACT...CACTGGTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR-3UTR CCA 90 bp TATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTTCTTTCAGGGAAGCGAGAGGGTaGCCTTTACTATTTGAATAC +
Preference number: 2 (lower is better)
Translates to: YMGKRYDGSECCQEQLSFREARG*PLLFEY
Trigger: GTATTCAAATAGTAAAGGCCACCCTCTCGCTTCCCT...GAAAGAAAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
3UTR CAA 90 bp AAAGCTAAAGACTTTAAGAAAACTTTCAAAGGGAGATGGAGACTCTaGTACAACTCGAGCTTTGATGACCTTGAATGTTCGGTCCCACTG +
Preference number: 2 (lower is better)
Translates to: KAKDFKKTFKGRWRL*YNSSFDDLECSVPL
Trigger: CAGTGGGACCGAACATTCAAGGTCATCAAAGCTCGAGTTGTACAAGAGTCTCCATCTCCCTTTGAAAGTTTTCTTAAAGTCTTTAGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR-3UTR GCA 90 bp TATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTTCTTTCCCAACAACCTTCAAATaGACAGAAGTCTTAGTTATC +
Preference number: 2 (lower is better)
Translates to: YMGKRYDGSECCQEQLSFPTTFK*TEVLVI
Trigger: GATAACTAAGACTTCTGTGCATTTGAAGGTTGTTGG...GAAAGAAAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
3UTR-3UTR GCA 90 bp GTGAAAATAGTTTATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACCAACAACCTTCAAATaGACAGAAGTCTTAGTTATC +
Preference number: 2 (lower is better)
Translates to: VKIVYMGKRYDGSECCQEPTTFK*TEVLVI
Trigger: GATAACTAAGACTTCTGTGCATTTGAAGGTTGTTGG...TTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATAAACTATTTTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
3UTR-3UTR GCA 90 bp CTTTTAATAAGCCAGTACTATAAGAGCACCATTTCAGCACAACACAATCATTTGTATGATGGCTCAGAGTaGTGTCAAGAACAGCTTTCT +
Preference number: 2 (lower is better)
Translates to: LLISQYYKSTISAQHNHLYDGSE*CQEQLS
Trigger: AGAAAGCTGTTCTTGACAGCACTCTGAGCCATCATA...CAAATGATTGTGTTGTGCTGAAATGGTGCTCTTATAGTACTGGCTTATTAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
3UTR-3UTR CAA 90 bp AGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCAGTGGTAGCCCTGGGGGTTACACTGCAGACTTaGGTCTTGCCTGGTGCAGTA +
Preference number: 3 (lower is better)
Translates to: SIRSGAGRGSGIPVVALGVTLQT*VLPGAV
Trigger: TACTGCACCAGGCAAGACCAAAGTCTGCAGTGTAAC...CCCCAGGGCTACCACTGGTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR-3UTR CAA 90 bp ACAGTGAGGCCTGGCCATCTTCAACTTTCACTACAGACTCATCAAGGAAGGGGACTGCAGACTTTGGTCTaGCCTGGTGCAGTATGCGGG +
Preference number: 3 (lower is better)
Translates to: TVRPGHLQLSLQTHQGRGLQTLV*PGAVCG
Trigger: CCCGCATACTGCACCAGGCAAGACCAAAGTCTGCAG...TCCCCTTCCTTGATGAGTCTGTAGTGAAAGTTGAAGATGGCCAGGCCTCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR GCA 72 bp GGCCAGAGACAGCAGAATCTGAGCATTTTGTTACACTaGAGACTTTGGTCTTGCCTGGTGCAGTATGCGGGT +
Preference number: 3 (lower is better)
Translates to: GQRQQNLSILLH*RLWSCLVQYAG
Trigger: ACCCGCATACTGCACCAGGCAAGACCAAAGTCTGCAGTGTAACAAAATGCTCAGATTCTGCTGTCTCTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR CCA 72 bp CATGTTCTGAAAGCGTGTCATGAACACCATGTCCCATaGGTAGCCCGAGTCAAAGATTCGGCTGATCACCCA +
Preference number: 3 (lower is better)
Translates to: HVLKACHEHHVP*VARVKDSADHP
Trigger: TGGGTGATCAGCCGAATCTTTGACTCGGGCTACCCATGGGACATGGTGTTCATGACACGCTTTCAGAACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR TCA 72 bp GGAGGGAATTTCTCAACATGTTCTGAAAGCGTGTCATaGACACCATGTCCCATGGGTAGCCCGAGTCAAAGA +
Preference number: 3 (lower is better)
Translates to: GGNFSTCSESVS*TPCPMGSPSQR
Trigger: TCTTTGACTCGGGCTACCCATGGGACATGGTGTTCATGACACGCTTTCAGAACATGTTGAGAAATTCCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR CCA 72 bp GCCCAAGGGTTTGATGAGGCCAATAATGGCCAGGGTTaGCTTTTGCAGATGTGCAGGGAAGATATACTTGTA +
Preference number: 3 (lower is better)
Translates to: AQGFDEANNGQG*LLQMCREDILV
Trigger: TACAAGTATATCTTCCCTGCACATCTGCAAAAGCCAACCCTGGCCATTATTGGCCTCATCAAACCCTTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR-3UTR CAA 90 bp TTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCAGTGTGTACAACTCGAGCTTaGATGACCTTGAATGTTCGG +
Preference number: 3 (lower is better)
Translates to: LSFSSIRSGAGRGSGIPVCTTRA*MTLNVR
Trigger: CCGAACATTCAAGGTCATCAAAGCTCGAGTTGTACA...CACTGGTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR TCA 72 bp CTTTTGCAGATGTGCAGGGAAGATATACTTGTACAGTaGGGCCTGGCCATCTTCAACTTTCACTACAGACTC +
Preference number: 3 (lower is better)
Translates to: LLQMCREDILVQ*GLAIFNFHYRL
Trigger: GAGTCTGTAGTGAAAGTTGAAGATGGCCAGGCCTCACTGTACAAGTATATCTTCCCTGCACATCTGCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR CCA 72 bp TCTTGCTTCTCTTCATGCATAGTGACCACCTCCCATTaGCCAGAGACAGCAGAATCTGAGCATTTTGTTACA +
Preference number: 3 (lower is better)
Translates to: SCFSSCIVTTSH*PETAESEHFVT
Trigger: TGTAACAAAATGCTCAGATTCTGCTGTCTCTGGCCAATGGGAGGTGGTCACTATGCATGAAGAGAAGCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR-3UTR CAA 90 bp TTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCAGTGCAGAATCTGAGCATTTaGTTACACTGCAGACTTTGG +
Preference number: 3 (lower is better)
Translates to: LSFSSIRSGAGRGSGIPVQNLSI*LHCRLW
Trigger: CCAAAGTCTGCAGTGTAACAAAATGCTCAGATTCTG...CACTGGTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR TCA 72 bp TACTCATTGATCCTTCTGGCAAAAATGTTAGCAGCCTaGGCTGACTGGTTGTATGCTCCTGGTAATAATGCC +
Preference number: 3 (lower is better)
Translates to: YSLILLAKMLAA*ADWLYAPGNNA
Trigger: GGCATTATTACCAGGAGCATACAACCAGTCAGCTCAGGCTGCTAACATTTTTGCCAGAAGGATCAATGAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR-3UTR CAA 90 bp TTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCAGTGGCTGTAAGAGAGGAATaGGAGCATTGTAAATCTACT +
Preference number: 3 (lower is better)
Translates to: LSFSSIRSGAGRGSGIPVAVREE*EHCKST
Trigger: AGTAGATTTACAATGCTCCAATTCCTCTCTTACAGC...CACTGGTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
3UTR-3UTR CAA 90 bp CCTGAGCTGACTGGTTGTATGCTCCTGGTAATAATGCCGTCAGCTGAAAAGATAGCTGTAAGAGAGGAATaGGAGCATTGTAAATCTACT +
Preference number: 3 (lower is better)
Translates to: PELTGCMLLVIMPSAEKIAVREE*EHCKST
Trigger: AGTAGATTTACAATGCTCCAATTCCTCTCTTACAGC...TATCTTTTCAGCTGACGGCATTATTACCAGGAGCATACAACCAGTCAGCTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR-3UTR CAA 90 bp CTTAGTTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACGCTGTAAGAGAGGAATaGGAGCATTGTAAATCTACT +
Preference number: 3 (lower is better)
Translates to: LSYHSLALEVELGEAQEYAVREE*EHCKST
Trigger: AGTAGATTTACAATGCTCCAATTCCTCTCTTACAGC...GTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAACTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
3UTR TCA 72 bp TCCTGTCTTCTGGTATTAAGCCGTAATTTGCATGATTaGGCCAGTTGTTTATCTTTCGCTCCATCAACCAAG +
Preference number: 3 (lower is better)
Translates to: SCLLVLSRNLHD*ASCLSFAPSTK
Trigger: CTTGGTTGATGGAGCGAAAGATAAACAACTGGCTCAATCATGCAAATTACGGCTTAATACCAGAAGACAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR GCA 72 bp ATCCAGAATCACATGGCACACCAAAAACACATGCCCTaGTATTTCTTATACTTACCTTTCAGGACTCGAACA +
Preference number: 3 (lower is better)
Translates to: IQNHMAHQKHMP*YFLYLPFRTRT
Trigger: TGTTCGAGTCCTGAAAGGTAAGTATAAGAAATAGCAGGGCATGTGTTTTTGGTGTGCCATGTGATTCTGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR CCA 72 bp TCCAATCACAAGGACTCTCTTGTCCTTAAATATATCTaGATGCTTATATTGCCGGCTATGAAAGTACTGGCC +
Preference number: 3 (lower is better)
Translates to: SNHKDSLVLKYI*MLILPAMKVLA
Trigger: GGCCAGTACTTTCATAGCCGGCAATATAAGCATCCAGATATATTTAAGGACAAGAGAGTCCTTGTGATTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR CCA 72 bp GTTGTTTATCTTTCGCTCCATCAACCAAGTCACAATTaGGGTTGGGAGGGAATTTCTCAACATGTTCTGAAA +
Preference number: 3 (lower is better)
Translates to: VVYLSLHQPSHN*GWEGISQHVLK
Trigger: TTTCAGAACATGTTGAGAAATTCCCTCCCAACCCCAATTGTGACTTGGTTGATGGAGCGAAAGATAAACAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR TCA 72 bp GACTGGTTGTATGCTCCTGGTAATAATGCCGTCAGCTaGAAAGATAAGCATCTGGTCATCTCACTAATTATT +
Preference number: 3 (lower is better)
Translates to: DWLYAPGNNAVS*KDKHLVISLII
Trigger: AATAATTAGTGAGATGACCAGATGCTTATCTTTTCAGCTGACGGCATTATTACCAGGAGCATACAACCAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR CCA 72 bp AAATGCAACTTAAGTTTAGGTCTAGCTGTTGACTTATaGATAAAGATGCTTTACTATGGCTCTCCTTTCACG +
Preference number: 3 (lower is better)
Translates to: KCNLSLGLAVDL*IKMLYYGSPFT
Trigger: CGTGAAAGGAGAGCCATAGTAAAGCATCTTTATCCATAAGTCAACAGCTAGACCTAAACTTAAGTTGCATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR-3UTR CAA 90 bp CTTTTAATAAGCCAGTACTATAAGAGCACCATTTCAGCACAACACAATCATTTGGCTGTAAGAGAGGAATaGGAGCATTGTAAATCTACT +
Preference number: 3 (lower is better)
Translates to: LLISQYYKSTISAQHNHLAVREE*EHCKST
Trigger: AGTAGATTTACAATGCTCCAATTCCTCTCTTACAGC...CAAATGATTGTGTTGTGCTGAAATGGTGCTCTTATAGTACTGGCTTATTAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
3UTR GCA 72 bp GTAAGAGAGGAATTGGAGCATTGTAAATCTACTCTGTaGATCTTCCATTTAGGAGATCTTTTACTTATAGGA +
Preference number: 3 (lower is better)
Translates to: VREELEHCKSTL*IFHLGDLLLIG
Trigger: TCCTATAAGTAAAAGATCTCCTAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTCCTCTCTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR TCA 72 bp AGTGGCAAAGACAATGATGTCAATAGGCTCTTCCTTTaGAGTATTGTTAAATATGACAGAGTTTTCCTTTAC +
Preference number: 3 (lower is better)
Translates to: SGKDNDVNRLFL*SIVKYDRVFLY
Trigger: GTAAAGGAAAACTCTGTCATATTTAACAATACTTCAAAGGAAGAGCCTATTGACATCATTGTCTTTGCCACT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR CCA 90 bp AGCTGGGAGAGGCTCAGGAATACCAGTGGTAGCCCTGGGGCCAGCCAGGGAAGCAGTATGAGCCAGTGCTaGCTTGGGAGTCCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: SWERLRNTSGSPGASQGSSMSQC*LGSPQH
Trigger: GTGCTGGGGACTCCCAAGCCAGCACTGGCTCATACT...GCTTCCCTGGCTGGCCCCAGGGCTACCACTGGTATTCCTGAGCCTCTCCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367750.7
ENST00000402921.6
ENST00000617670.6
CDS-3UTR GCA 90 bp AGCTGGGAGAGGCTCAGGAATACCAGTGGTAGCCCTGGGGCCAGCCAGGGAAGCTGGTGCCAATGGCTCTaGCACGCAGGACTCTGGTAT +
Preference number: 4 (lower is better)
Translates to: SWERLRNTSGSPGASQGSWCQWL*HAGLWY
Trigger: ATACCAGAGTCCTGCGTGGCAGAGCCATTGGCACCA...GCTTCCCTGGCTGGCCCCAGGGCTACCACTGGTATTCCTGAGCCTCTCCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367750.7
ENST00000402921.6
ENST00000617670.6
CDS-3UTR CCA 90 bp AGCTGGGAGAGGCTCAGGAATACCAGTGGTAGCCCTGGGGCCAGCCAGGGAAGCGTGACCACCTCCCATTaGCCAGAGACAGCAGAATCT +
Preference number: 4 (lower is better)
Translates to: SWERLRNTSGSPGASQGSVTTSH*PETAES
Trigger: AGATTCTGCTGTCTCTGGCCAATGGGAGGTGGTCAC...GCTTCCCTGGCTGGCCCCAGGGCTACCACTGGTATTCCTGAGCCTCTCCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp AGCTGGGAGAGGCTCAGGAATACCAGTGGTAGCCCTGGGGCCAGCCAGGGAAGCGAACACCATGTCCCATaGGTAGCCCGAGTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: SWERLRNTSGSPGASQGSEHHVP*VARVKD
Trigger: ATCTTTGACTCGGGCTACCCATGGGACATGGTGTTC...GCTTCCCTGGCTGGCCCCAGGGCTACCACTGGTATTCCTGAGCCTCTCCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp AGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCAGTGGTAGCCCTGGGGAGTCAAAGATTCGGCTaGTCACCCATCCCCCTCCGG +
Preference number: 4 (lower is better)
Translates to: SIRSGAGRGSGIPVVALGSQRFG*SPIPLR
Trigger: CCGGAGGGGGATGGGTGATCAGCCGAATCTTTGACT...CCCCAGGGCTACCACTGGTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR GCA 90 bp AGCTGGGAGAGGCTCAGGAATACCAGTGGTAGCCCTGGGGCCAGCCAGGGAAGCTGTAGAGACTGGCTCTaGCTTCTTCAACATGTTCGG +
Preference number: 4 (lower is better)
Translates to: SWERLRNTSGSPGASQGSCRDWL*LLQHVR
Trigger: CCGAACATGTTGAAGAAGGCAGAGCCAGTCTCTACA...GCTTCCCTGGCTGGCCCCAGGGCTACCACTGGTATTCCTGAGCCTCTCCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000469112.5
ENST00000617670.6
CDS-3UTR GCA 90 bp AGCTGGGAGAGGCTCAGGAATACCAGTGGTAGCCCTGGGGCCAGCCAGGGAAGCAGCTTCTGGCAGAGCTaGTGGAATTGGACCTTTTAC +
Preference number: 4 (lower is better)
Translates to: SWERLRNTSGSPGASQGSSFWQS*WNWTFY
Trigger: GTAAAAGGTCCAATTCCAGCAGCTCTGCCAGAAGCT...GCTTCCCTGGCTGGCCCCAGGGCTACCACTGGTATTCCTGAGCCTCTCCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR CCA 90 bp AGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCAGTGGTAGCCCTGGGGTTTCCGCCAGGTGGCTaGCCTCCACAGCAATGTCTG +
Preference number: 4 (lower is better)
Translates to: SIRSGAGRGSGIPVVALGFPPGG*PPQQCL
Trigger: CAGACATTGCTGTGGAGGCCAGCCACCTGGCGGAAA...CCCCAGGGCTACCACTGGTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp GCCCGAGTCAAAGATTCGGCTGATCACCCATCCCCCTCCGGTGGTGCTGAGGAAGATATACTTGTACAGTaGGGCCTGGCCATCTTCAAC +
Preference number: 4 (lower is better)
Translates to: ARVKDSADHPSPSGGAEEDILVQ*GLAIFN
Trigger: GTTGAAGATGGCCAGGCCTCACTGTACAAGTATATC...TTCCTCAGCACCACCGGAGGGGGATGGGTGATCAGCCGAATCTTTGACTCGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR TCA 90 bp AGCTGGGAGAGGCTCAGGAATACCAGTGGTAGCCCTGGGGCCAGCCAGGGAAGCGTACCAGCTACTCATTaGTCCTTCTGGCAAAAATGT +
Preference number: 4 (lower is better)
Translates to: SWERLRNTSGSPGASQGSVPATH*SFWQKC
Trigger: ACATTTTTGCCAGAAGGATCAATGAGTAGCTGGTAC...GCTTCCCTGGCTGGCCCCAGGGCTACCACTGGTATTCCTGAGCCTCTCCCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR CCA 90 bp AGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCAGTGGTAGCCCTGGGGGTGACCACCTCCCATTaGCCAGAGACAGCAGAATCT +
Preference number: 4 (lower is better)
Translates to: SIRSGAGRGSGIPVVALGVTTSH*PETAES
Trigger: AGATTCTGCTGTCTCTGGCCAATGGGAGGTGGTCAC...CCCCAGGGCTACCACTGGTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp AGCTGGGAGAGGCTCAGGAATACCAGTGGTAGCCCTGGGGCCAGCCAGGGAAGCAGTCACAATTGGGGTTaGGAGGGAATTTCTCAACAT +
Preference number: 4 (lower is better)
Translates to: SWERLRNTSGSPGASQGSSHNWG*EGISQH
Trigger: ATGTTGAGAAATTCCCTCCCAACCCCAATTGTGACT...GCTTCCCTGGCTGGCCCCAGGGCTACCACTGGTATTCCTGAGCCTCTCCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp AGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCAGTGGTAGCCCTGGGGTCTGAAAGCGTGTCATaGACACCATGTCCCATGGGT +
Preference number: 4 (lower is better)
Translates to: SIRSGAGRGSGIPVVALGSESVS*TPCPMG
Trigger: ACCCATGGGACATGGTGTTCATGACACGCTTTCAGA...CCCCAGGGCTACCACTGGTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp AGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCAGTGGTAGCCCTGGGGGAACACCATGTCCCATaGGTAGCCCGAGTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: SIRSGAGRGSGIPVVALGEHHVP*VARVKD
Trigger: ATCTTTGACTCGGGCTACCCATGGGACATGGTGTTC...CCCCAGGGCTACCACTGGTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp AGCTGGGAGAGGCTCAGGAATACCAGTGGTAGCCCTGGGGCCAGCCAGGGAAGCGGTTTGCATACATTTTaGGATATTCCAGGAATTGAG +
Preference number: 4 (lower is better)
Translates to: SWERLRNTSGSPGASQGSGLHTF*DIPGIE
Trigger: CTCAATTCCTGGAATATCTCAAAATGTATGCAAACC...GCTTCCCTGGCTGGCCCCAGGGCTACCACTGGTATTCCTGAGCCTCTCCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp AGCTGGGAGAGGCTCAGGAATACCAGTGGTAGCCCTGGGGCCAGCCAGGGAAGCACTTTGGTCTTGAATTaGATGTGTTTCAGAAGGTCA +
Preference number: 4 (lower is better)
Translates to: SWERLRNTSGSPGASQGSTLVLN*MCFRRS
Trigger: TGACCTTCTGAAACACATTCAATTCAAGACCAAAGT...GCTTCCCTGGCTGGCCCCAGGGCTACCACTGGTATTCCTGAGCCTCTCCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000617670.6
CDS-3UTR TCA 90 bp TTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCAGTGCCCCTCCGGTGGTGCTaGGGAACACCTTTTCCGCCA +
Preference number: 4 (lower is better)
Translates to: LSFSSIRSGAGRGSGIPVPLRWC*GTPFPP
Trigger: TGGCGGAAAAGGTGTTCCTCAGCACCACCGGAGGGG...CACTGGTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp TCTCAACATGTTCTGAAAGCGTGTCATGAACACCATGTCCCATGGGTAGCCCGAAGTCAAAGATTCGGCTaGTCACCCATCCCCCTCCGG +
Preference number: 4 (lower is better)
Translates to: SQHVLKACHEHHVPWVARSQRFG*SPIPLR
Trigger: CCGGAGGGGGATGGGTGATCAGCCGAATCTTTGACT...TCGGGCTACCCATGGGACATGGTGTTCATGACACGCTTTCAGAACATGTTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR TCA 90 bp GCCCGAGTCAAAGATTCGGCTGATCACCCATCCCCCTCCGGTGGTGCTGAGGAATTTCTCAACATGTTCTaGAAGCGTGTCATGAACACC +
Preference number: 4 (lower is better)
Translates to: ARVKDSADHPSPSGGAEEFLNMF*KRVMNT
Trigger: GGTGTTCATGACACGCTTTCAGAACATGTTGAGAAA...TTCCTCAGCACCACCGGAGGGGGATGGGTGATCAGCCGAATCTTTGACTCGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR TCA 90 bp AGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCAGTGGTAGCCCTGGGGTATGGGAAAGAGGTATaGTGGCTCAGAGTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: SIRSGAGRGSGIPVVALGYGKEV*WLRVLS
Trigger: TGACAGCACTCTGAGCCATCATACCTCTTTCCCATA...CCCCAGGGCTACCACTGGTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR GCA 90 bp AGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCAGTGGTAGCCCTGGGGTTGGCCATGTTCTCCTaGATGAGGAAGATGAAGCAG +
Preference number: 4 (lower is better)
Translates to: SIRSGAGRGSGIPVVALGLAMFS*MRKMKQ
Trigger: CTGCTTCATCTTCCTCATGCAGGAGAACATGGCCAA...CCCCAGGGCTACCACTGGTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354841.4
CDS-3UTR GCA 90 bp AGCTGGGAGAGGCTCAGGAATACCAGTGGTAGCCCTGGGGCCAGCCAGGGAAGCCCAACAACCTTCAAATaGACAGAAGTCTTAGTTATC +
Preference number: 4 (lower is better)
Translates to: SWERLRNTSGSPGASQGSPTTFK*TEVLVI
Trigger: GATAACTAAGACTTCTGTGCATTTGAAGGTTGTTGG...GCTTCCCTGGCTGGCCCCAGGGCTACCACTGGTATTCCTGAGCCTCTCCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp CTTAGTTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCCCCTCCGGTGGTGCTaGGGAACACCTTTTCCGCCA +
Preference number: 4 (lower is better)
Translates to: LSYHSLALEVELGEAQEYPLRWC*GTPFPP
Trigger: TGGCGGAAAAGGTGTTCCTCAGCACCACCGGAGGGG...GTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAACTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp TGGAGACTCTTGTACAACTCGAGCTTTGATGACCTTGAATGTTCGGTCCCACTGTTTCCGCCAGGTGGCTaGCCTCCACAGCAATGTCTG +
Preference number: 4 (lower is better)
Translates to: WRLLYNSSFDDLECSVPLFPPGG*PPQQCL
Trigger: CAGACATTGCTGTGGAGGCCAGCCACCTGGCGGAAA...CAGTGGGACCGAACATTCAAGGTCATCAAAGCTCGAGTTGTACAAGAGTCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR TCA 90 bp AGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCAGTGGTAGCCCTGGGGTTTCTCAACATGTTCTaGAAGCGTGTCATGAACACC +
Preference number: 4 (lower is better)
Translates to: SIRSGAGRGSGIPVVALGFLNMF*KRVMNT
Trigger: GGTGTTCATGACACGCTTTCAGAACATGTTGAGAAA...CCCCAGGGCTACCACTGGTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp AGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCAGTGGTAGCCCTGGGGGGTTGGGTTTTGCATTaGTATAGGTCAGGAGTTCAT +
Preference number: 4 (lower is better)
Translates to: SIRSGAGRGSGIPVVALGGWVLH*YRSGVH
Trigger: ATGAACTCCTGACCTATATCAATGCAAAACCCAACC...CCCCAGGGCTACCACTGGTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp TCTCAACATGTTCTGAAAGCGTGTCATGAACACCATGTCCCATGGGTAGCCCGATCTTGCACTTCAGACTaGGCTGCTGCCTCTAGTCTC +
Preference number: 4 (lower is better)
Translates to: SQHVLKACHEHHVPWVARSCTSD*AAASSL
Trigger: GAGACTAGAGGCAGCAGCTCAGTCTGAAGTGCAAGA...TCGGGCTACCCATGGGACATGGTGTTCATGACACGCTTTCAGAACATGTTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR TCA 90 bp GCCCGAGTCAAAGATTCGGCTGATCACCCATCCCCCTCCGGTGGTGCTGAGGAAATACCACTCTTGAATTaGATGTGTTTCAGAAGGTCA +
Preference number: 4 (lower is better)
Translates to: ARVKDSADHPSPSGGAEEIPLLN*MCFRRS
Trigger: TGACCTTCTGAAACACATTCAATTCAAGAGTGGTAT...TTCCTCAGCACCACCGGAGGGGGATGGGTGATCAGCCGAATCTTTGACTCGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR CCA 90 bp TTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCAGTGACCTTTTCCGCCAGGTaGCTGGCCTCCACAGCAATG +
Preference number: 4 (lower is better)
Translates to: LSFSSIRSGAGRGSGIPVTFSAR*LASTAM
Trigger: CATTGCTGTGGAGGCCAGCCACCTGGCGGAAAAGGT...CACTGGTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp AGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCAGTGGTAGCCCTGGGGACTTTCAAAGGGAGATaGAGACTCTTGTACAACTCG +
Preference number: 4 (lower is better)
Translates to: SIRSGAGRGSGIPVVALGTFKGR*RLLYNS
Trigger: CGAGTTGTACAAGAGTCTCCATCTCCCTTTGAAAGT...CCCCAGGGCTACCACTGGTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp ATGGTGAGCATGGGCCAAAGAAGACGGTCAGAGCCAGATGTGGATCCGTTAGGACAATGGCAACTCGCTTaGCCATGTTCTCAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: MVSMGQRRRSEPDVDPLGQWQLA*PCSQLS
Trigger: TGACAACTGAGAACATGGCCAAGCGAGTTGCCATTG...TCCTAACGGATCCACATCTGGCTCTGACCGTCTTCTTTGGCCCATGCTCACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR CAA 72 bp ATACTTACCTTTCAGGACTCGAACAGCCCACCGAGCTaGTGTTTCTCCTGTAGGTATCATGGAGCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: ILTFQDSNSPPS*CFSCRYHGAQG
Trigger: CCCTTGGGCTCCATGATACCTACAGGAGAAACACAAGCTCGGTGGGCTGTTCGAGTCCTGAAAGGTAAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR TCA 90 bp TTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCAGTGGTTAGCAGCCTGAGCTaGCTGGTTGTATGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LSFSSIRSGAGRGSGIPVVSSLS*LVVCSW
Trigger: CCAGGAGCATACAACCAGTCAGCTCAGGCTGCTAAC...CACTGGTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR CCA 90 bp CTTAGTTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCCCCAGCTCCCACAATaGCAACTCGCTTGGCCATGT +
Preference number: 4 (lower is better)
Translates to: LSYHSLALEVELGEAQEYPQLPQ*QLAWPC
Trigger: ACATGGCCAAGCGAGTTGCCATTGTGGGAGCTGGGG...GTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAACTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp ATGGTGAGCATGGGCCAAAGAAGACGGTCAGAGCCAGATGTGGATCCGTTAGGACAGACTTGTAGAGACTaGCTCTGCCTTCTTCAACAT +
Preference number: 4 (lower is better)
Translates to: MVSMGQRRRSEPDVDPLGQTCRD*LCLLQH
Trigger: ATGTTGAAGAAGGCAGAGCCAGTCTCTACAAGTCTG...TCCTAACGGATCCACATCTGGCTCTGACCGTCTTCTTTGGCCCATGCTCACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR CCA 90 bp AGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCAGTGGTAGCCCTGGGGAAAGGCATTAATACCTaGAAAGGAATCCAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: SIRSGAGRGSGIPVVALGKGINT*KGIQWQ
Trigger: TTGCCACTGGATTCCTTTCCAGGTATTAATGCCTTT...CCCCAGGGCTACCACTGGTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp CTTAGTTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACTTTCCGCCAGGTGGCTaGCCTCCACAGCAATGTCTG +
Preference number: 4 (lower is better)
Translates to: LSYHSLALEVELGEAQEYFPPGG*PPQQCL
Trigger: CAGACATTGCTGTGGAGGCCAGCCACCTGGCGGAAA...GTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAACTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp CTTAGTTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACACCTTTTCCGCCAGGTaGCTGGCCTCCACAGCAATG +
Preference number: 4 (lower is better)
Translates to: LSYHSLALEVELGEAQEYTFSAR*LASTAM
Trigger: CATTGCTGTGGAGGCCAGCCACCTGGCGGAAAAGGT...GTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAACTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp CTTAGTTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACAGTATGAGCCAGTGCTaGCTTGGGAGTCCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: LSYHSLALEVELGEAQEYSMSQC*LGSPQH
Trigger: GTGCTGGGGACTCCCAAGCCAGCACTGGCTCATACT...GTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAACTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367750.7
ENST00000402921.6
ENST00000617670.6
CDS-3UTR TCA 90 bp AGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCAGTGGTAGCCCTGGGGACTTTGGTCTTGAATTaGATGTGTTTCAGAAGGTCA +
Preference number: 4 (lower is better)
Translates to: SIRSGAGRGSGIPVVALGTLVLN*MCFRRS
Trigger: TGACCTTCTGAAACACATTCAATTCAAGACCAAAGT...CCCCAGGGCTACCACTGGTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000617670.6
CDS-3UTR GCA 90 bp TCTCAACATGTTCTGAAAGCGTGTCATGAACACCATGTCCCATGGGTAGCCCGATGTAGAGACTGGCTCTaGCTTCTTCAACATGTTCGG +
Preference number: 4 (lower is better)
Translates to: SQHVLKACHEHHVPWVARCRDWL*LLQHVR
Trigger: CCGAACATGTTGAAGAAGGCAGAGCCAGTCTCTACA...TCGGGCTACCCATGGGACATGGTGTTCATGACACGCTTTCAGAACATGTTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR GCA 90 bp AGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCAGTGGTAGCCCTGGGGCCAACAACCTTCAAATaGACAGAAGTCTTAGTTATC +
Preference number: 4 (lower is better)
Translates to: SIRSGAGRGSGIPVVALGPTTFK*TEVLVI
Trigger: GATAACTAAGACTTCTGTGCATTTGAAGGTTGTTGG...CCCCAGGGCTACCACTGGTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR GCA 90 bp CTTAGTTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACTGGTGCCAATGGCTCTaGCACGCAGGACTCTGGTAT +
Preference number: 4 (lower is better)
Translates to: LSYHSLALEVELGEAQEYWCQWL*HAGLWY
Trigger: ATACCAGAGTCCTGCGTGGCAGAGCCATTGGCACCA...GTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAACTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367750.7
ENST00000402921.6
ENST00000617670.6
CDS-3UTR CCA 90 bp TTTTATGCTTGGCCTGATGAACACTTTCCCAGTGATGATGCGTCCTGGGAGCTCAATAATGGCCAGGGTTaGCTTTTGCAGATGTGCAGG +
Preference number: 4 (lower is better)
Translates to: FYAWPDEHFPSDDASWELNNGQG*LLQMCR
Trigger: CCTGCACATCTGCAAAAGCCAACCCTGGCCATTATT...GAGCTCCCAGGACGCATCATCACTGGGAAAGTGTTCATCAGGCCAAGCATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR CCA 90 bp ATGGTGAGCATGGGCCAAAGAAGACGGTCAGAGCCAGATGTGGATCCGTTAGGAACAAGCCAAACCAACTaGGCTTGTTTTCTTTCCTTG +
Preference number: 4 (lower is better)
Translates to: MVSMGQRRRSEPDVDPLGTSQTN*ACFLSL
Trigger: CAAGGAAAGAAAACAAGCCCAGTTGGTTTGGCTTGT...TCCTAACGGATCCACATCTGGCTCTGACCGTCTTCTTTGGCCCATGCTCACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR CCA 90 bp CTTAGTTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCCAGTCAAGCGGAACTaGTATGGTGAGCATGGGCCA +
Preference number: 4 (lower is better)
Translates to: LSYHSLALEVELGEAQEYPVKRN*YGEHGP
Trigger: TGGCCCATGCTCACCATACCAGTTCCGCTTGACTGG...GTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAACTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp GATGTGCAGGGAAGATATACTTGTACAGTGAGGCCTGGCCATCTTCAACTTTCATCCTTCCCATTTTCCTaGGCCAGTCAAGCGGAACTG +
Preference number: 4 (lower is better)
Translates to: DVQGRYTCTVRPGHLQLSSFPFS*ASQAEL
Trigger: CAGTTCCGCTTGACTGGCCCAGGAAAATGGGAAGGA...TGAAAGTTGAAGATGGCCAGGCCTCACTGTACAAGTATATCTTCCCTGCACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR CAA 72 bp TCAAAGGGAGATGGAGACTCTTGTACAACTCGAGCTTaGATGACCTTGAATGTTCGGTCCCACTGGGTCATG +
Preference number: 4 (lower is better)
Translates to: SKGDGDSCTTRA*MTLNVRSHWVM
Trigger: CATGACCCAGTGGGACCGAACATTCAAGGTCATCAAAGCTCGAGTTGTACAAGAGTCTCCATCTCCCTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR TCA 90 bp TTTTATGCTTGGCCTGATGAACACTTTCCCAGTGATGATGCGTCCTGGGAGCTCAAAATGTTAGCAGCCTaGGCTGACTGGTTGTATGCT +
Preference number: 4 (lower is better)
Translates to: FYAWPDEHFPSDDASWELKMLAA*ADWLYA
Trigger: AGCATACAACCAGTCAGCTCAGGCTGCTAACATTTT...GAGCTCCCAGGACGCATCATCACTGGGAAAGTGTTCATCAGGCCAAGCATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR GCA 90 bp TTTTATGCTTGGCCTGATGAACACTTTCCCAGTGATGATGCGTCCTGGGAGCTCTCTTGCTTCTCTTCATaGATAGTGACCACCTCCCAT +
Preference number: 4 (lower is better)
Translates to: FYAWPDEHFPSDDASWELSCFSS*IVTTSH
Trigger: ATGGGAGGTGGTCACTATGCATGAAGAGAAGCAAGA...GAGCTCCCAGGACGCATCATCACTGGGAAAGTGTTCATCAGGCCAAGCATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR GCA 90 bp TATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTTCTTTCATCAGTATGAGCCAGTaGTGGCTTGGGAGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: YMGKRYDGSECCQEQLSFISMSQ*WLGSPQ
Trigger: CTGGGGACTCCCAAGCCAGCACTGGCTCATACTGAT...GAAAGAAAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367750.7
ENST00000402921.6
ENST00000617670.6
CDS-3UTR CCA 90 bp AGTATCCAGAATCACATGGCACACCAAAAACACATGCCCTGCTATTTCTTATACACCTTTTCCGCCAGGTaGCTGGCCTCCACAGCAATG +
Preference number: 4 (lower is better)
Translates to: SIQNHMAHQKHMPCYFLYTFSAR*LASTAM
Trigger: CATTGCTGTGGAGGCCAGCCACCTGGCGGAAAAGGT...GTATAAGAAATAGCAGGGCATGTGTTTTTGGTGTGCCATGTGATTCTGGATACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR CCA 90 bp CTTAGTTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACTCCTTCCCATTTTCCTaGGCCAGTCAAGCGGAACTG +
Preference number: 4 (lower is better)
Translates to: LSYHSLALEVELGEAQEYSFPFS*ASQAEL
Trigger: CAGTTCCGCTTGACTGGCCCAGGAAAATGGGAAGGA...GTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAACTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp TCTCAACATGTTCTGAAAGCGTGTCATGAACACCATGTCCCATGGGTAGCCCGAAGGGAAGCGAGAGGGTaGCCTTTACTATTTGAATAC +
Preference number: 4 (lower is better)
Translates to: SQHVLKACHEHHVPWVARREARG*PLLFEY
Trigger: GTATTCAAATAGTAAAGGCCACCCTCTCGCTTCCCT...TCGGGCTACCCATGGGACATGGTGTTCATGACACGCTTTCAGAACATGTTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR TCA 90 bp TATAACTGTGAAGGCAATATTGCTGTAAGAGAGGAATTGGAGCATTGTAAATCTCCCCTCCGGTGGTGCTaGGGAACACCTTTTCCGCCA +
Preference number: 4 (lower is better)
Translates to: YNCEGNIAVREELEHCKSPLRWC*GTPFPP
Trigger: TGGCGGAAAAGGTGTTCCTCAGCACCACCGGAGGGG...AGATTTACAATGCTCCAATTCCTCTCTTACAGCAATATTGCCTTCACAGTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp CTTTTAATAAGCCAGTACTATAAGAGCACCATTTCAGCACAACACAATCATTTGCCCCTCCGGTGGTGCTaGGGAACACCTTTTCCGCCA +
Preference number: 4 (lower is better)
Translates to: LLISQYYKSTISAQHNHLPLRWC*GTPFPP
Trigger: TGGCGGAAAAGGTGTTCCTCAGCACCACCGGAGGGG...CAAATGATTGTGTTGTGCTGAAATGGTGCTCTTATAGTACTGGCTTATTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp GAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTAGGAGATCTTTTACCCCTCCGGTGGTGCTaGGGAACACCTTTTCCGCCA +
Preference number: 4 (lower is better)
Translates to: ELEHCKSTLCIFHLGDLLPLRWC*GTPFPP
Trigger: TGGCGGAAAAGGTGTTCCTCAGCACCACCGGAGGGG...TAAAAGATCTCCTAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp GCTGTAAGAGAGGAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTAAGTCAAAGATTCGGCTaGTCACCCATCCCCCTCCGG +
Preference number: 4 (lower is better)
Translates to: AVREELEHCKSTLCIFHLSQRFG*SPIPLR
Trigger: CCGGAGGGGGATGGGTGATCAGCCGAATCTTTGACT...TAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTCCTCTCTTACAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp TTTTATGCTTGGCCTGATGAACACTTTCCCAGTGATGATGCGTCCTGGGAGCTCGGTTGGGTTTTGCATTaGTATAGGTCAGGAGTTCAT +
Preference number: 4 (lower is better)
Translates to: FYAWPDEHFPSDDASWELGWVLH*YRSGVH
Trigger: ATGAACTCCTGACCTATATCAATGCAAAACCCAACC...GAGCTCCCAGGACGCATCATCACTGGGAAAGTGTTCATCAGGCCAAGCATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR GCA 90 bp TATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTTCTTTCCACCCCACCCTTGGCTaGTCTAACAAGCCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: YMGKRYDGSECCQEQLSFHPTLG*SNKPGK
Trigger: TTTTCCTGGCTTGTTAGAGCAGCCAAGGGTGGGGTG...GAAAGAAAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354841.4
CDS-3UTR GCA 90 bp ATGGTGAGCATGGGCCAAAGAAGACGGTCAGAGCCAGATGTGGATCCGTTAGGACCAACAACCTTCAAATaGACAGAAGTCTTAGTTATC +
Preference number: 4 (lower is better)
Translates to: MVSMGQRRRSEPDVDPLGPTTFK*TEVLVI
Trigger: GATAACTAAGACTTCTGTGCATTTGAAGGTTGTTGG...TCCTAACGGATCCACATCTGGCTCTGACCGTCTTCTTTGGCCCATGCTCACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR GCA 90 bp TCTCAACATGTTCTGAAAGCGTGTCATGAACACCATGTCCCATGGGTAGCCCGATATGATGGCTCAGAGTaGTGTCAAGAACAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: SQHVLKACHEHHVPWVARYDGSE*CQEQLS
Trigger: AGAAAGCTGTTCTTGACAGCACTCTGAGCCATCATA...TCGGGCTACCCATGGGACATGGTGTTCATGACACGCTTTCAGAACATGTTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR GCA 90 bp ACAGTGAGGCCTGGCCATCTTCAACTTTCACTACAGACTCATCAAGGAAGGGGAAGCATTTTGTTACACTaGAGACTTTGGTCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: TVRPGHLQLSLQTHQGRGSILLH*RLWSCL
Trigger: CAGGCAAGACCAAAGTCTGCAGTGTAACAAAATGCT...TCCCCTTCCTTGATGAGTCTGTAGTGAAAGTTGAAGATGGCCAGGCCTCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR CCA 90 bp GCTGTAAGAGAGGAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTACCCCAGCTCCCACAATaGCAACTCGCTTGGCCATGT +
Preference number: 4 (lower is better)
Translates to: AVREELEHCKSTLCIFHLPQLPQ*QLAWPC
Trigger: ACATGGCCAAGCGAGTTGCCATTGTGGGAGCTGGGG...TAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTCCTCTCTTACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp TATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTTCTTTCGTGACCACCTCCCATTaGCCAGAGACAGCAGAATCT +
Preference number: 4 (lower is better)
Translates to: YMGKRYDGSECCQEQLSFVTTSH*PETAES
Trigger: AGATTCTGCTGTCTCTGGCCAATGGGAGGTGGTCAC...GAAAGAAAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp GTGAAAATAGTTTATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAATTTCCGCCAGGTGGCTaGCCTCCACAGCAATGTCTG +
Preference number: 4 (lower is better)
Translates to: VKIVYMGKRYDGSECCQEFPPGG*PPQQCL
Trigger: CAGACATTGCTGTGGAGGCCAGCCACCTGGCGGAAA...TTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATAAACTATTTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp GCTGTAAGAGAGGAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTATTTCCGCCAGGTGGCTaGCCTCCACAGCAATGTCTG +
Preference number: 4 (lower is better)
Translates to: AVREELEHCKSTLCIFHLFPPGG*PPQQCL
Trigger: CAGACATTGCTGTGGAGGCCAGCCACCTGGCGGAAA...TAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTCCTCTCTTACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp CTGACTGGTTGTATGCTCCTGGTAATAATGCCGTCAGCTGAAAAGATAAGCATCGAACACCATGTCCCATaGGTAGCCCGAGTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: LTGCMLLVIMPSAEKISIEHHVP*VARVKD
Trigger: ATCTTTGACTCGGGCTACCCATGGGACATGGTGTTC...GATGCTTATCTTTTCAGCTGACGGCATTATTACCAGGAGCATACAACCAGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR CCA 90 bp TATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTTCTTTCTCCTTCCCATTTTCCTaGGCCAGTCAAGCGGAACTG +
Preference number: 4 (lower is better)
Translates to: YMGKRYDGSECCQEQLSFSFPFS*ASQAEL
Trigger: CAGTTCCGCTTGACTGGCCCAGGAAAATGGGAAGGA...GAAAGAAAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp TTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCAGTGCGTACTTGTAATTTCTaGTGCCAATGGCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: LSFSSIRSGAGRGSGIPVRTCNF*CQWLCH
Trigger: GTGGCAGAGCCATTGGCACCAGAAATTACAAGTACG...CACTGGTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402921.6
ENST00000617670.6
CDS-3UTR TCA 90 bp TGGAGACTCTTGTACAACTCGAGCTTTGATGACCTTGAATGTTCGGTCCCACTGAATAATGCCGTCAGCTaGAAAGATAAGCATCTGGTC +
Preference number: 4 (lower is better)
Translates to: WRLLYNSSFDDLECSVPLNNAVS*KDKHLV
Trigger: GACCAGATGCTTATCTTTTCAGCTGACGGCATTATT...CAGTGGGACCGAACATTCAAGGTCATCAAAGCTCGAGTTGTACAAGAGTCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR GCA 90 bp GCTGTAAGAGAGGAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTAATCAGTATGAGCCAGTaGTGGCTTGGGAGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: AVREELEHCKSTLCIFHLISMSQ*WLGSPQ
Trigger: CTGGGGACTCCCAAGCCAGCACTGGCTCATACTGAT...TAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTCCTCTCTTACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367750.7
ENST00000402921.6
ENST00000617670.6
CDS-3UTR GCA 90 bp GTGAAAATAGTTTATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAAATCAGTATGAGCCAGTaGTGGCTTGGGAGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: VKIVYMGKRYDGSECCQEISMSQ*WLGSPQ
Trigger: CTGGGGACTCCCAAGCCAGCACTGGCTCATACTGAT...TTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATAAACTATTTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367750.7
ENST00000402921.6
ENST00000617670.6
CDS-3UTR CCA 90 bp CTTAGTTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACAATAATGGCCAGGGTTaGCTTTTGCAGATGTGCAGG +
Preference number: 4 (lower is better)
Translates to: LSYHSLALEVELGEAQEYNNGQG*LLQMCR
Trigger: CCTGCACATCTGCAAAAGCCAACCCTGGCCATTATT...GTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAACTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
3UTR CAA 72 bp GGCCAGCCAGGGAAGCGAGAGGGTGGCCTTTACTATTaGAATACAGTTTATAACTGTGAAGGCAATATTGCT +
Preference number: 4 (lower is better)
Translates to: GQPGKREGGLYY*NTVYNCEGNIA
Trigger: AGCAATATTGCCTTCACAGTTATAAACTGTATTCAAATAGTAAAGGCCACCCTCTCGCTTCCCTGGCTGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp TTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCAGTGAGAGACAGCAGAATCTaGGCATTTTGTTACACTGCA +
Preference number: 4 (lower is better)
Translates to: LSFSSIRSGAGRGSGIPVRDSRI*AFCYTA
Trigger: TGCAGTGTAACAAAATGCTCAGATTCTGCTGTCTCT...CACTGGTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp CTTTTAATAAGCCAGTACTATAAGAGCACCATTTCAGCACAACACAATCATTTGAGTCAAAGATTCGGCTaGTCACCCATCCCCCTCCGG +
Preference number: 4 (lower is better)
Translates to: LLISQYYKSTISAQHNHLSQRFG*SPIPLR
Trigger: CCGGAGGGGGATGGGTGATCAGCCGAATCTTTGACT...CAAATGATTGTGTTGTGCTGAAATGGTGCTCTTATAGTACTGGCTTATTAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp ATAGTTTATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTTCTGAAAGCGTGTCATaGACACCATGTCCCATGGGT +
Preference number: 4 (lower is better)
Translates to: IVYMGKRYDGSECCQEQLSESVS*TPCPMG
Trigger: ACCCATGGGACATGGTGTTCATGACACGCTTTCAGA...AAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATAAACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp TATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTTCTTTCGATATACTTGTACAGTaGGGCCTGGCCATCTTCAAC +
Preference number: 4 (lower is better)
Translates to: YMGKRYDGSECCQEQLSFDILVQ*GLAIFN
Trigger: GTTGAAGATGGCCAGGCCTCACTGTACAAGTATATC...GAAAGAAAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp TTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCAGTGGGTTGGGTTTTGCATTaGTATAGGTCAGGAGTTCAT +
Preference number: 4 (lower is better)
Translates to: LSFSSIRSGAGRGSGIPVGWVLH*YRSGVH
Trigger: ATGAACTCCTGACCTATATCAATGCAAAACCCAACC...CACTGGTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR GCA 90 bp CTTAGTTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACTCTTGCTTCTCTTCATaGATAGTGACCACCTCCCAT +
Preference number: 4 (lower is better)
Translates to: LSYHSLALEVELGEAQEYSCFSS*IVTTSH
Trigger: ATGGGAGGTGGTCACTATGCATGAAGAGAAGCAAGA...GTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAACTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR GCA 90 bp CTGACTGGTTGTATGCTCCTGGTAATAATGCCGTCAGCTGAAAAGATAAGCATCCCTATAAATAGCCACTaGACACTAGTCTGGACGAGA +
Preference number: 4 (lower is better)
Translates to: LTGCMLLVIMPSAEKISIPINSH*TLVWTR
Trigger: TCTCGTCCAGACTAGTGTGCAGTGGCTATTTATAGG...GATGCTTATCTTTTCAGCTGACGGCATTATTACCAGGAGCATACAACCAGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR CCA 90 bp CTTTTAATAAGCCAGTACTATAAGAGCACCATTTCAGCACAACACAATCATTTGCCCCAGCTCCCACAATaGCAACTCGCTTGGCCATGT +
Preference number: 4 (lower is better)
Translates to: LLISQYYKSTISAQHNHLPQLPQ*QLAWPC
Trigger: ACATGGCCAAGCGAGTTGCCATTGTGGGAGCTGGGG...CAAATGATTGTGTTGTGCTGAAATGGTGCTCTTATAGTACTGGCTTATTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp CTTAGTTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCAGACTTGTAGAGACTaGCTCTGCCTTCTTCAACAT +
Preference number: 4 (lower is better)
Translates to: LSYHSLALEVELGEAQEYQTCRD*LCLLQH
Trigger: ATGTTGAAGAAGGCAGAGCCAGTCTCTACAAGTCTG...GTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAACTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp TATAACTGTGAAGGCAATATTGCTGTAAGAGAGGAATTGGAGCATTGTAAATCTACCTTTTCCGCCAGGTaGCTGGCCTCCACAGCAATG +
Preference number: 4 (lower is better)
Translates to: YNCEGNIAVREELEHCKSTFSAR*LASTAM
Trigger: CATTGCTGTGGAGGCCAGCCACCTGGCGGAAAAGGT...AGATTTACAATGCTCCAATTCCTCTCTTACAGCAATATTGCCTTCACAGTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp ATAGTTTATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTGAACACCATGTCCCATaGGTAGCCCGAGTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: IVYMGKRYDGSECCQEQLEHHVP*VARVKD
Trigger: ATCTTTGACTCGGGCTACCCATGGGACATGGTGTTC...AAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATAAACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp CTTAGTTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCAACCAAGTCACAATTaGGGTTGGGAGGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: LSYHSLALEVELGEAQEYQPSHN*GWEGIS
Trigger: AGAAATTCCCTCCCAACCCCAATTGTGACTTGGTTG...GTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAACTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp GCTGTAAGAGAGGAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTATCCTTCCCATTTTCCTaGGCCAGTCAAGCGGAACTG +
Preference number: 4 (lower is better)
Translates to: AVREELEHCKSTLCIFHLSFPFS*ASQAEL
Trigger: CAGTTCCGCTTGACTGGCCCAGGAAAATGGGAAGGA...TAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTCCTCTCTTACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp CTTAGTTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACAGGGAAGCGAGAGGGTaGCCTTTACTATTTGAATAC +
Preference number: 4 (lower is better)
Translates to: LSYHSLALEVELGEAQEYREARG*PLLFEY
Trigger: GTATTCAAATAGTAAAGGCCACCCTCTCGCTTCCCT...GTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAACTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp CTTTTAATAAGCCAGTACTATAAGAGCACCATTTCAGCACAACACAATCATTTGAGTATGAGCCAGTGCTaGCTTGGGAGTCCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: LLISQYYKSTISAQHNHLSMSQC*LGSPQH
Trigger: GTGCTGGGGACTCCCAAGCCAGCACTGGCTCATACT...CAAATGATTGTGTTGTGCTGAAATGGTGCTCTTATAGTACTGGCTTATTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367750.7
ENST00000402921.6
ENST00000617670.6
CDS-3UTR CCA 90 bp GCTGTAAGAGAGGAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTAAATTTCTGGTGCCAATaGCTCTGCCACGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: AVREELEHCKSTLCIFHLNFWCQ*LCHAGL
Trigger: GAGTCCTGCGTGGCAGAGCCATTGGCACCAGAAATT...TAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTCCTCTCTTACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367750.7
ENST00000402921.6
ENST00000617670.6
CDS-3UTR CCA 90 bp TTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCAGTGCAATGGCAACTCGCTTaGCCATGTTCTCTTGTAATT +
Preference number: 4 (lower is better)
Translates to: LSFSSIRSGAGRGSGIPVQWQLA*PCSLVI
Trigger: AATTACAAGAGAACATGGCCAAGCGAGTTGCCATTG...CACTGGTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367750.7
CDS-3UTR TCA 90 bp CTTAGTTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACTGGGAATGGAAAGTCTaGGTAACAAGACATCTCCTT +
Preference number: 4 (lower is better)
Translates to: LSYHSLALEVELGEAQEYWEWKV*VTRHLL
Trigger: AAGGAGATGTCTTGTTACTCAGACTTTCCATTCCCA...GTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAACTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp CTGACTGGTTGTATGCTCCTGGTAATAATGCCGTCAGCTGAAAAGATAAGCATCTGGGAATGGAAAGTCTaGGTAACAAGACATCTCCTT +
Preference number: 4 (lower is better)
Translates to: LTGCMLLVIMPSAEKISIWEWKV*VTRHLL
Trigger: AAGGAGATGTCTTGTTACTCAGACTTTCCATTCCCA...GATGCTTATCTTTTCAGCTGACGGCATTATTACCAGGAGCATACAACCAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR TCA 90 bp CTTAGTTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACAGAGACAGCAGAATCTaGGCATTTTGTTACACTGCA +
Preference number: 4 (lower is better)
Translates to: LSYHSLALEVELGEAQEYRDSRI*AFCYTA
Trigger: TGCAGTGTAACAAAATGCTCAGATTCTGCTGTCTCT...GTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAACTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp ATAGTTTATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTGATATACTTGTACAGTaGGGCCTGGCCATCTTCAAC +
Preference number: 4 (lower is better)
Translates to: IVYMGKRYDGSECCQEQLDILVQ*GLAIFN
Trigger: GTTGAAGATGGCCAGGCCTCACTGTACAAGTATATC...AAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATAAACTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp ATAGTTTATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTTATGGGAAAGAGGTATaGTGGCTCAGAGTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: IVYMGKRYDGSECCQEQLYGKEV*WLRVLS
Trigger: TGACAGCACTCTGAGCCATCATACCTCTTTCCCATA...AAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATAAACTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR GCA 90 bp GGTCTAGCTGTTGACTTATGGATAAAGATGCTTTACTATGGCTCTCCTTTCACGAACAAGACATCTCCTTaGAGCTGTTGGAAACCACAG +
Preference number: 4 (lower is better)
Translates to: GLAVDLWIKMLYYGSPFTNKTSP*SCWKPQ
Trigger: CTGTGGTTTCCAACAGCTGCAAGGAGATGTCTTGTT...CGTGAAAGGAGAGCCATAGTAAAGCATCTTTATCCATAAGTCAACAGCTAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR GCA 90 bp TTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCAGTGTGGCTTTTGCAGATGTaGAGGGAAGATATACTTGTA +
Preference number: 4 (lower is better)
Translates to: LSFSSIRSGAGRGSGIPVWLLQM*REDILV
Trigger: TACAAGTATATCTTCCCTGCACATCTGCAAAAGCCA...CACTGGTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR GCA 90 bp TATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTTCTTTCCTGATTGTAAAGCCTTaGAGTAGCACAAGCCAAACC +
Preference number: 4 (lower is better)
Translates to: YMGKRYDGSECCQEQLSFLIVKP*SSTSQT
Trigger: GGTTTGGCTTGTGCTACTGCAAGGCTTTACAATCAG...GAAAGAAAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR GCA 90 bp CTTAGTTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACTATGATGGCTCAGAGTaGTGTCAAGAACAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LSYHSLALEVELGEAQEYYDGSE*CQEQLS
Trigger: AGAAAGCTGTTCTTGACAGCACTCTGAGCCATCATA...GTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAACTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR GCA 90 bp CTTTTAATAAGCCAGTACTATAAGAGCACCATTTCAGCACAACACAATCATTTGTGGTGCCAATGGCTCTaGCACGCAGGACTCTGGTAT +
Preference number: 4 (lower is better)
Translates to: LLISQYYKSTISAQHNHLWCQWL*HAGLWY
Trigger: ATACCAGAGTCCTGCGTGGCAGAGCCATTGGCACCA...CAAATGATTGTGTTGTGCTGAAATGGTGCTCTTATAGTACTGGCTTATTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367750.7
ENST00000402921.6
ENST00000617670.6
CDS-3UTR CCA 90 bp TGGAGACTCTTGTACAACTCGAGCTTTGATGACCTTGAATGTTCGGTCCCACTGATTTGGCACATAGTTTaGATAATCTTCTGGGAATGG +
Preference number: 4 (lower is better)
Translates to: WRLLYNSSFDDLECSVPLIWHIV*IIFWEW
Trigger: CCATTCCCAGAAGATTATCCAAACTATGTGCCAAAT...CAGTGGGACCGAACATTCAAGGTCATCAAAGCTCGAGTTGTACAAGAGTCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR CCA 90 bp TTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCAGTGAAAGGCATTAATACCTaGAAAGGAATCCAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: LSFSSIRSGAGRGSGIPVKGINT*KGIQWQ
Trigger: TTGCCACTGGATTCCTTTCCAGGTATTAATGCCTTT...CACTGGTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp ATAGTTTATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTAATAATGGCCAGGGTTaGCTTTTGCAGATGTGCAGG +
Preference number: 4 (lower is better)
Translates to: IVYMGKRYDGSECCQEQLNNGQG*LLQMCR
Trigger: CCTGCACATCTGCAAAAGCCAACCCTGGCCATTATT...AAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATAAACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp GAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTAGGAGATCTTTTACCAGTCAAGCGGAACTaGTATGGTGAGCATGGGCCA +
Preference number: 4 (lower is better)
Translates to: ELEHCKSTLCIFHLGDLLPVKRN*YGEHGP
Trigger: TGGCCCATGCTCACCATACCAGTTCCGCTTGACTGG...TAAAAGATCTCCTAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp CTTTTAATAAGCCAGTACTATAAGAGCACCATTTCAGCACAACACAATCATTTGCCAGTCAAGCGGAACTaGTATGGTGAGCATGGGCCA +
Preference number: 4 (lower is better)
Translates to: LLISQYYKSTISAQHNHLPVKRN*YGEHGP
Trigger: TGGCCCATGCTCACCATACCAGTTCCGCTTGACTGG...CAAATGATTGTGTTGTGCTGAAATGGTGCTCTTATAGTACTGGCTTATTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp CTTAGTTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACACTTTCAAAGGGAGATaGAGACTCTTGTACAACTCG +
Preference number: 4 (lower is better)
Translates to: LSYHSLALEVELGEAQEYTFKGR*RLLYNS
Trigger: CGAGTTGTACAAGAGTCTCCATCTCCCTTTGAAAGT...GTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAACTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp TATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTTCTTTCCAATGGCAACTCGCTTaGCCATGTTCTCTTTACGTA +
Preference number: 4 (lower is better)
Translates to: YMGKRYDGSECCQEQLSFQWQLA*PCSLYV
Trigger: TACGTAAAGAGAACATGGCCAAGCGAGTTGCCATTG...GAAAGAAAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402921.6
ENST00000617670.6
CDS-3UTR TCA 90 bp GGTCTAGCTGTTGACTTATGGATAAAGATGCTTTACTATGGCTCTCCTTTCACGAGAGACAGCAGAATCTaGGCATTTTGTTACACTGCA +
Preference number: 4 (lower is better)
Translates to: GLAVDLWIKMLYYGSPFTRDSRI*AFCYTA
Trigger: TGCAGTGTAACAAAATGCTCAGATTCTGCTGTCTCT...CGTGAAAGGAGAGCCATAGTAAAGCATCTTTATCCATAAGTCAACAGCTAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR TCA 90 bp TATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTTCTTTCTTTCTCAACATGTTCTaGAAGCGTGTCATGAACACC +
Preference number: 4 (lower is better)
Translates to: YMGKRYDGSECCQEQLSFFLNMF*KRVMNT
Trigger: GGTGTTCATGACACGCTTTCAGAACATGTTGAGAAA...GAAAGAAAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp GCTGTAAGAGAGGAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTATATGGGAAAGAGGTATaGTGGCTCAGAGTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: AVREELEHCKSTLCIFHLYGKEV*WLRVLS
Trigger: TGACAGCACTCTGAGCCATCATACCTCTTTCCCATA...TAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTCCTCTCTTACAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp GTGAAAATAGTTTATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAATATGGGAAAGAGGTATaGTGGCTCAGAGTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: VKIVYMGKRYDGSECCQEYGKEV*WLRVLS
Trigger: TGACAGCACTCTGAGCCATCATACCTCTTTCCCATA...TTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATAAACTATTTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp GTGAAAATAGTTTATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAAAATGAATCAGTATaGGCCAGTGCTGGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: VKIVYMGKRYDGSECCQEQNESV*ASAGLG
Trigger: TCCCAAGCCAGCACTGGCTCATACTGATTCATTTTG...TTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATAAACTATTTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367750.7
ENST00000402921.6
ENST00000617670.6
CDS-3UTR GCA 90 bp GCTGTAAGAGAGGAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTATGTAGAGACTGGCTCTaGCTTCTTCAACATGTTCGG +
Preference number: 4 (lower is better)
Translates to: AVREELEHCKSTLCIFHLCRDWL*LLQHVR
Trigger: CCGAACATGTTGAAGAAGGCAGAGCCAGTCTCTACA...TAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTCCTCTCTTACAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000469112.5
ENST00000617670.6
CDS-3UTR GCA 90 bp ATAGTTTATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTAACAAGACATCTCCTTaGAGCTGTTGGAAACCACAG +
Preference number: 4 (lower is better)
Translates to: IVYMGKRYDGSECCQEQLNKTSP*SCWKPQ
Trigger: CTGTGGTTTCCAACAGCTGCAAGGAGATGTCTTGTT...AAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATAAACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000469112.5
ENST00000617670.6
CDS-3UTR GCA 90 bp CTTAGTTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACTGGCTTTTGCAGATGTaGAGGGAAGATATACTTGTA +
Preference number: 4 (lower is better)
Translates to: LSYHSLALEVELGEAQEYWLLQM*REDILV
Trigger: TACAAGTATATCTTCCCTGCACATCTGCAAAAGCCA...GTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAACTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR GCA 90 bp TTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCAGTGCCAACAACCTTCAAATaGACAGAAGTCTTAGTTATC +
Preference number: 4 (lower is better)
Translates to: LSFSSIRSGAGRGSGIPVPTTFK*TEVLVI
Trigger: GATAACTAAGACTTCTGTGCATTTGAAGGTTGTTGG...CACTGGTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR GCA 90 bp TGGAGACTCTTGTACAACTCGAGCTTTGATGACCTTGAATGTTCGGTCCCACTGCAAAAACACATGCCCTaGTATTTCTTATACTTACCT +
Preference number: 4 (lower is better)
Translates to: WRLLYNSSFDDLECSVPLQKHMP*YFLYLP
Trigger: AGGTAAGTATAAGAAATAGCAGGGCATGTGTTTTTG...CAGTGGGACCGAACATTCAAGGTCATCAAAGCTCGAGTTGTACAAGAGTCTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR CCA 90 bp TTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCAGTGATTTGGCACATAGTTTaGATAATCTTCTGGGAATGG +
Preference number: 4 (lower is better)
Translates to: LSFSSIRSGAGRGSGIPVIWHIV*IIFWEW
Trigger: CCATTCCCAGAAGATTATCCAAACTATGTGCCAAAT...CACTGGTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp GAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTAGGAGATCTTTTAGTGACCACCTCCCATTaGCCAGAGACAGCAGAATCT +
Preference number: 4 (lower is better)
Translates to: ELEHCKSTLCIFHLGDLLVTTSH*PETAES
Trigger: AGATTCTGCTGTCTCTGGCCAATGGGAGGTGGTCAC...TAAAAGATCTCCTAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp TATAACTGTGAAGGCAATATTGCTGTAAGAGAGGAATTGGAGCATTGTAAATCTGTGACCACCTCCCATTaGCCAGAGACAGCAGAATCT +
Preference number: 4 (lower is better)
Translates to: YNCEGNIAVREELEHCKSVTTSH*PETAES
Trigger: AGATTCTGCTGTCTCTGGCCAATGGGAGGTGGTCAC...AGATTTACAATGCTCCAATTCCTCTCTTACAGCAATATTGCCTTCACAGTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp TATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTTCTTTCACAAGCCAAACCAACTaGGCTTGTTTTCTTTCCTTG +
Preference number: 4 (lower is better)
Translates to: YMGKRYDGSECCQEQLSFTSQTN*ACFLSL
Trigger: CAAGGAAAGAAAACAAGCCCAGTTGGTTTGGCTTGT...GAAAGAAAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp GAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTAGGAGATCTTTTATCCTTCCCATTTTCCTaGGCCAGTCAAGCGGAACTG +
Preference number: 4 (lower is better)
Translates to: ELEHCKSTLCIFHLGDLLSFPFS*ASQAEL
Trigger: CAGTTCCGCTTGACTGGCCCAGGAAAATGGGAAGGA...TAAAAGATCTCCTAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp GAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTAGGAGATCTTTTAAATTTCTGGTGCCAATaGCTCTGCCACGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: ELEHCKSTLCIFHLGDLLNFWCQ*LCHAGL
Trigger: GAGTCCTGCGTGGCAGAGCCATTGGCACCAGAAATT...TAAAAGATCTCCTAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367750.7
ENST00000402921.6
ENST00000617670.6
CDS-3UTR CCA 90 bp TATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTTCTTTCCAGAGCTGCTGGAATTaGACCTTTTACTGGATAAAG +
Preference number: 4 (lower is better)
Translates to: YMGKRYDGSECCQEQLSFQSCWN*TFYWIK
Trigger: CTTTATCCAGTAAAAGGTCCAATTCCAGCAGCTCTG...GAAAGAAAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR CCA 90 bp GAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTAGGAGATCTTTTACAAGGCTGTAGCTTCTaGCAGAGCTGCTGGAATTGG +
Preference number: 4 (lower is better)
Translates to: ELEHCKSTLCIFHLGDLLQGCSF*QSCWNW
Trigger: CCAATTCCAGCAGCTCTGCCAGAAGCTACAGCCTTG...TAAAAGATCTCCTAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR CAA 72 bp AGTTGTTTATCTTTCGCTCCATCAACCAAGTCACAATaGGGGTTGGGAGGGAATTTCTCAACATGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: SCLSFAPSTKSQ*GLGGNFSTCSE
Trigger: TTCAGAACATGTTGAGAAATTCCCTCCCAACCCCAATTGTGACTTGGTTGATGGAGCGAAAGATAAACAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR TCA 90 bp CTTTTAATAAGCCAGTACTATAAGAGCACCATTTCAGCACAACACAATCATTTGTCTGAAAGCGTGTCATaGACACCATGTCCCATGGGT +
Preference number: 4 (lower is better)
Translates to: LLISQYYKSTISAQHNHLSESVS*TPCPMG
Trigger: ACCCATGGGACATGGTGTTCATGACACGCTTTCAGA...CAAATGATTGTGTTGTGCTGAAATGGTGCTCTTATAGTACTGGCTTATTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp TATAACTGTGAAGGCAATATTGCTGTAAGAGAGGAATTGGAGCATTGTAAATCTTCTGAAAGCGTGTCATaGACACCATGTCCCATGGGT +
Preference number: 4 (lower is better)
Translates to: YNCEGNIAVREELEHCKSSESVS*TPCPMG
Trigger: ACCCATGGGACATGGTGTTCATGACACGCTTTCAGA...AGATTTACAATGCTCCAATTCCTCTCTTACAGCAATATTGCCTTCACAGTTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp ATAGTTTATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTTTTCTCAACATGTTCTaGAAGCGTGTCATGAACACC +
Preference number: 4 (lower is better)
Translates to: IVYMGKRYDGSECCQEQLFLNMF*KRVMNT
Trigger: GGTGTTCATGACACGCTTTCAGAACATGTTGAGAAA...AAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATAAACTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp CTTAGTTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCGTAATTTGCATGATTaGGCCAGTTGTTTATCTTTC +
Preference number: 4 (lower is better)
Translates to: LSYHSLALEVELGEAQEYRNLHD*ASCLSF
Trigger: GAAAGATAAACAACTGGCTCAATCATGCAAATTACG...GTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAACTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR GCA 90 bp GCTGTAAGAGAGGAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTAAACAAGACATCTCCTTaGAGCTGTTGGAAACCACAG +
Preference number: 4 (lower is better)
Translates to: AVREELEHCKSTLCIFHLNKTSP*SCWKPQ
Trigger: CTGTGGTTTCCAACAGCTGCAAGGAGATGTCTTGTT...TAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTCCTCTCTTACAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000469112.5
ENST00000617670.6
CDS-3UTR GCA 90 bp GTGAAAATAGTTTATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAAAACAAGACATCTCCTTaGAGCTGTTGGAAACCACAG +
Preference number: 4 (lower is better)
Translates to: VKIVYMGKRYDGSECCQENKTSP*SCWKPQ
Trigger: CTGTGGTTTCCAACAGCTGCAAGGAGATGTCTTGTT...TTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATAAACTATTTTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000469112.5
ENST00000617670.6
CDS-3UTR GCA 90 bp GTGAAAATAGTTTATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAATCTTGCTTCTCTTCATaGATAGTGACCACCTCCCAT +
Preference number: 4 (lower is better)
Translates to: VKIVYMGKRYDGSECCQESCFSS*IVTTSH
Trigger: ATGGGAGGTGGTCACTATGCATGAAGAGAAGCAAGA...TTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATAAACTATTTTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp TATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTTCTTTCAAAGGCATTAATACCTaGAAAGGAATCCAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: YMGKRYDGSECCQEQLSFKGINT*KGIQWQ
Trigger: TTGCCACTGGATTCCTTTCCAGGTATTAATGCCTTT...GAAAGAAAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp CTTTTAATAAGCCAGTACTATAAGAGCACCATTTCAGCACAACACAATCATTTGGAACACCATGTCCCATaGGTAGCCCGAGTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: LLISQYYKSTISAQHNHLEHHVP*VARVKD
Trigger: ATCTTTGACTCGGGCTACCCATGGGACATGGTGTTC...CAAATGATTGTGTTGTGCTGAAATGGTGCTCTTATAGTACTGGCTTATTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp GTGAAAATAGTTTATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAACCAAGTCACAATTaGGGTTGGGAGGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: VKIVYMGKRYDGSECCQEQPSHN*GWEGIS
Trigger: AGAAATTCCCTCCCAACCCCAATTGTGACTTGGTTG...TTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATAAACTATTTTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp ATAGTTTATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTACTTTCAAAGGGAGATaGAGACTCTTGTACAACTCG +
Preference number: 4 (lower is better)
Translates to: IVYMGKRYDGSECCQEQLTFKGR*RLLYNS
Trigger: CGAGTTGTACAAGAGTCTCCATCTCCCTTTGAAAGT...AAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATAAACTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp GCTGTAAGAGAGGAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTAAGGGAAGCGAGAGGGTaGCCTTTACTATTTGAATAC +
Preference number: 4 (lower is better)
Translates to: AVREELEHCKSTLCIFHLREARG*PLLFEY
Trigger: GTATTCAAATAGTAAAGGCCACCCTCTCGCTTCCCT...TAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTCCTCTCTTACAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp TATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTTCTTTCACTTTGGTCTTGAATTaGATGTGTTTCAGAAGGTCA +
Preference number: 4 (lower is better)
Translates to: YMGKRYDGSECCQEQLSFTLVLN*MCFRRS
Trigger: TGACCTTCTGAAACACATTCAATTCAAGACCAAAGT...GAAAGAAAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000617670.6
CDS-3UTR TCA 90 bp ATAGTTTATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTTTATATTGCCGGCTATaGAAGTACTGGCCTTTAAAG +
Preference number: 4 (lower is better)
Translates to: IVYMGKRYDGSECCQEQLLYCRL*KYWPLK
Trigger: CTTTAAAGGCCAGTACTTTCATAGCCGGCAATATAA...AAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATAAACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp AGTATCCAGAATCACATGGCACACCAAAAACACATGCCCTGCTATTTCTTATACTTATATTGCCGGCTATaGAAGTACTGGCCTTTAAAG +
Preference number: 4 (lower is better)
Translates to: SIQNHMAHQKHMPCYFLYLYCRL*KYWPLK
Trigger: CTTTAAAGGCCAGTACTTTCATAGCCGGCAATATAA...GTATAAGAAATAGCAGGGCATGTGTTTTTGGTGTGCCATGTGATTCTGGATACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR TCA 90 bp GAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTAGGAGATCTTTTAGATATACTTGTACAGTaGGGCCTGGCCATCTTCAAC +
Preference number: 4 (lower is better)
Translates to: ELEHCKSTLCIFHLGDLLDILVQ*GLAIFN
Trigger: GTTGAAGATGGCCAGGCCTCACTGTACAAGTATATC...TAAAAGATCTCCTAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp TATAACTGTGAAGGCAATATTGCTGTAAGAGAGGAATTGGAGCATTGTAAATCTGATATACTTGTACAGTaGGGCCTGGCCATCTTCAAC +
Preference number: 4 (lower is better)
Translates to: YNCEGNIAVREELEHCKSDILVQ*GLAIFN
Trigger: GTTGAAGATGGCCAGGCCTCACTGTACAAGTATATC...AGATTTACAATGCTCCAATTCCTCTCTTACAGCAATATTGCCTTCACAGTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp TATAACTGTGAAGGCAATATTGCTGTAAGAGAGGAATTGGAGCATTGTAAATCTTATGGGAAAGAGGTATaGTGGCTCAGAGTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: YNCEGNIAVREELEHCKSYGKEV*WLRVLS
Trigger: TGACAGCACTCTGAGCCATCATACCTCTTTCCCATA...AGATTTACAATGCTCCAATTCCTCTCTTACAGCAATATTGCCTTCACAGTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp CTTTTAATAAGCCAGTACTATAAGAGCACCATTTCAGCACAACACAATCATTTGCAAAATGAATCAGTATaGGCCAGTGCTGGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: LLISQYYKSTISAQHNHLQNESV*ASAGLG
Trigger: TCCCAAGCCAGCACTGGCTCATACTGATTCATTTTG...CAAATGATTGTGTTGTGCTGAAATGGTGCTCTTATAGTACTGGCTTATTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367750.7
ENST00000402921.6
ENST00000617670.6
CDS-3UTR TCA 90 bp TATAACTGTGAAGGCAATATTGCTGTAAGAGAGGAATTGGAGCATTGTAAATCTCAAAATGAATCAGTATaGGCCAGTGCTGGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: YNCEGNIAVREELEHCKSQNESV*ASAGLG
Trigger: TCCCAAGCCAGCACTGGCTCATACTGATTCATTTTG...AGATTTACAATGCTCCAATTCCTCTCTTACAGCAATATTGCCTTCACAGTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367750.7
ENST00000402921.6
ENST00000617670.6
CDS-3UTR GCA 90 bp ATAGTTTATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTTGGCTTTTGCAGATGTaGAGGGAAGATATACTTGTA +
Preference number: 4 (lower is better)
Translates to: IVYMGKRYDGSECCQEQLWLLQM*REDILV
Trigger: TACAAGTATATCTTCCCTGCACATCTGCAAAAGCCA...AAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATAAACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR GCA 90 bp GCTGTAAGAGAGGAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTATATGATGGCTCAGAGTaGTGTCAAGAACAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: AVREELEHCKSTLCIFHLYDGSE*CQEQLS
Trigger: AGAAAGCTGTTCTTGACAGCACTCTGAGCCATCATA...TAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTCCTCTCTTACAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp TATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTTCTTTCATTTGGCACATAGTTTaGATAATCTTCTGGGAATGG +
Preference number: 4 (lower is better)
Translates to: YMGKRYDGSECCQEQLSFIWHIV*IIFWEW
Trigger: CCATTCCCAGAAGATTATCCAAACTATGTGCCAAAT...GAAAGAAAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp GTGAAAATAGTTTATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAAAGTCACAATTGGGGTTaGGAGGGAATTTCTCAACAT +
Preference number: 4 (lower is better)
Translates to: VKIVYMGKRYDGSECCQESHNWG*EGISQH
Trigger: ATGTTGAGAAATTCCCTCCCAACCCCAATTGTGACT...TTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATAAACTATTTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp GCTGTAAGAGAGGAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTAAGTCACAATTGGGGTTaGGAGGGAATTTCTCAACAT +
Preference number: 4 (lower is better)
Translates to: AVREELEHCKSTLCIFHLSHNWG*EGISQH
Trigger: ATGTTGAGAAATTCCCTCCCAACCCCAATTGTGACT...TAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTCCTCTCTTACAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp CTTTTAATAAGCCAGTACTATAAGAGCACCATTTCAGCACAACACAATCATTTGAATAATGGCCAGGGTTaGCTTTTGCAGATGTGCAGG +
Preference number: 4 (lower is better)
Translates to: LLISQYYKSTISAQHNHLNNGQG*LLQMCR
Trigger: CCTGCACATCTGCAAAAGCCAACCCTGGCCATTATT...CAAATGATTGTGTTGTGCTGAAATGGTGCTCTTATAGTACTGGCTTATTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp GTGAAAATAGTTTATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAAACAAGCCAAACCAACTaGGCTTGTTTTCTTTCCTTG +
Preference number: 4 (lower is better)
Translates to: VKIVYMGKRYDGSECCQETSQTN*ACFLSL
Trigger: CAAGGAAAGAAAACAAGCCCAGTTGGTTTGGCTTGT...TTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATAAACTATTTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp CTTTTAATAAGCCAGTACTATAAGAGCACCATTTCAGCACAACACAATCATTTGCGTACTTGTAATTTCTaGTGCCAATGGCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: LLISQYYKSTISAQHNHLRTCNF*CQWLCH
Trigger: GTGGCAGAGCCATTGGCACCAGAAATTACAAGTACG...CAAATGATTGTGTTGTGCTGAAATGGTGCTCTTATAGTACTGGCTTATTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402921.6
ENST00000617670.6
CDS-3UTR CCA 90 bp TATAACTGTGAAGGCAATATTGCTGTAAGAGAGGAATTGGAGCATTGTAAATCTTTCTGGCAGAGCTGCTaGAATTGGACCTTTTACTGG +
Preference number: 4 (lower is better)
Translates to: YNCEGNIAVREELEHCKSFWQSC*NWTFYW
Trigger: CCAGTAAAAGGTCCAATTCCAGCAGCTCTGCCAGAA...AGATTTACAATGCTCCAATTCCTCTCTTACAGCAATATTGCCTTCACAGTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
3UTR CAA 72 bp GACTTTAAGAAAACTTTCAAAGGGAGATGGAGACTCTaGTACAACTCGAGCTTTGATGACCTTGAATGTTCG +
Preference number: 4 (lower is better)
Translates to: DFKKTFKGRWRL*YNSSFDDLECS
Trigger: CGAACATTCAAGGTCATCAAAGCTCGAGTTGTACAAGAGTCTCCATCTCCCTTTGAAAGTTTTCTTAAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR TCA 90 bp GCTGTAAGAGAGGAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTATTATATTGCCGGCTATaGAAGTACTGGCCTTTAAAG +
Preference number: 4 (lower is better)
Translates to: AVREELEHCKSTLCIFHLLYCRL*KYWPLK
Trigger: CTTTAAAGGCCAGTACTTTCATAGCCGGCAATATAA...TAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTCCTCTCTTACAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR GCA 90 bp CTTTTAATAAGCCAGTACTATAAGAGCACCATTTCAGCACAACACAATCATTTGTCTTGCTTCTCTTCATaGATAGTGACCACCTCCCAT +
Preference number: 4 (lower is better)
Translates to: LLISQYYKSTISAQHNHLSCFSS*IVTTSH
Trigger: ATGGGAGGTGGTCACTATGCATGAAGAGAAGCAAGA...CAAATGATTGTGTTGTGCTGAAATGGTGCTCTTATAGTACTGGCTTATTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR GCA 90 bp GAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTAGGAGATCTTTTACTGATTGTAAAGCCTTaGAGTAGCACAAGCCAAACC +
Preference number: 4 (lower is better)
Translates to: ELEHCKSTLCIFHLGDLLLIVKP*SSTSQT
Trigger: GGTTTGGCTTGTGCTACTGCAAGGCTTTACAATCAG...TAAAAGATCTCCTAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR GCA 90 bp CTTTTAATAAGCCAGTACTATAAGAGCACCATTTCAGCACAACACAATCATTTGCTGATTGTAAAGCCTTaGAGTAGCACAAGCCAAACC +
Preference number: 4 (lower is better)
Translates to: LLISQYYKSTISAQHNHLLIVKP*SSTSQT
Trigger: GGTTTGGCTTGTGCTACTGCAAGGCTTTACAATCAG...CAAATGATTGTGTTGTGCTGAAATGGTGCTCTTATAGTACTGGCTTATTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR GCA 90 bp AGTATCCAGAATCACATGGCACACCAAAAACACATGCCCTGCTATTTCTTATACCACACCAAAAACACATaGCCTGCTATTTCTTATACT +
Preference number: 4 (lower is better)
Translates to: SIQNHMAHQKHMPCYFLYHTKNT*PAISYT
Trigger: AGTATAAGAAATAGCAGGGCATGTGTTTTTGGTGTG...GTATAAGAAATAGCAGGGCATGTGTTTTTGGTGTGCCATGTGATTCTGGATACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR CCA 90 bp GTGAAAATAGTTTATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAAAAAGGCATTAATACCTaGAAAGGAATCCAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: VKIVYMGKRYDGSECCQEKGINT*KGIQWQ
Trigger: TTGCCACTGGATTCCTTTCCAGGTATTAATGCCTTT...TTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATAAACTATTTTCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp GAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTAGGAGATCTTTTACAACCAAGTCACAATTaGGGTTGGGAGGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: ELEHCKSTLCIFHLGDLLQPSHN*GWEGIS
Trigger: AGAAATTCCCTCCCAACCCCAATTGTGACTTGGTTG...TAAAAGATCTCCTAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp TATAACTGTGAAGGCAATATTGCTGTAAGAGAGGAATTGGAGCATTGTAAATCTCAACCAAGTCACAATTaGGGTTGGGAGGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: YNCEGNIAVREELEHCKSQPSHN*GWEGIS
Trigger: AGAAATTCCCTCCCAACCCCAATTGTGACTTGGTTG...AGATTTACAATGCTCCAATTCCTCTCTTACAGCAATATTGCCTTCACAGTTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp CTTTTAATAAGCCAGTACTATAAGAGCACCATTTCAGCACAACACAATCATTTGAGGGAAGCGAGAGGGTaGCCTTTACTATTTGAATAC +
Preference number: 4 (lower is better)
Translates to: LLISQYYKSTISAQHNHLREARG*PLLFEY
Trigger: GTATTCAAATAGTAAAGGCCACCCTCTCGCTTCCCT...CAAATGATTGTGTTGTGCTGAAATGGTGCTCTTATAGTACTGGCTTATTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp CTTTTAATAAGCCAGTACTATAAGAGCACCATTTCAGCACAACACAATCATTTGCAATGGCAACTCGCTTaGCCATGTTCTCTTTACGTA +
Preference number: 4 (lower is better)
Translates to: LLISQYYKSTISAQHNHLQWQLA*PCSLYV
Trigger: TACGTAAAGAGAACATGGCCAAGCGAGTTGCCATTG...CAAATGATTGTGTTGTGCTGAAATGGTGCTCTTATAGTACTGGCTTATTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402921.6
ENST00000617670.6
CDS-3UTR CCA 90 bp GGTCTAGCTGTTGACTTATGGATAAAGATGCTTTACTATGGCTCTCCTTTCACGAATTGGACCTTTTACTaGATAAAGTCTTGCACTTCA +
Preference number: 4 (lower is better)
Translates to: GLAVDLWIKMLYYGSPFTNWTFY*IKSCTS
Trigger: TGAAGTGCAAGACTTTATCCAGTAAAAGGTCCAATT...CGTGAAAGGAGAGCCATAGTAAAGCATCTTTATCCATAAGTCAACAGCTAGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR TCA 90 bp CTTTTAATAAGCCAGTACTATAAGAGCACCATTTCAGCACAACACAATCATTTGTGGGAATGGAAAGTCTaGGTAACAAGACATCTCCTT +
Preference number: 4 (lower is better)
Translates to: LLISQYYKSTISAQHNHLWEWKV*VTRHLL
Trigger: AAGGAGATGTCTTGTTACTCAGACTTTCCATTCCCA...CAAATGATTGTGTTGTGCTGAAATGGTGCTCTTATAGTACTGGCTTATTAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp GCTGTAAGAGAGGAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTAGGTTTGCATACATTTTaGGATATTCCAGGAATTGAG +
Preference number: 4 (lower is better)
Translates to: AVREELEHCKSTLCIFHLGLHTF*DIPGIE
Trigger: CTCAATTCCTGGAATATCTCAAAATGTATGCAAACC...TAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTCCTCTCTTACAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp CTTTTAATAAGCCAGTACTATAAGAGCACCATTTCAGCACAACACAATCATTTGAGAGACAGCAGAATCTaGGCATTTTGTTACACTGCA +
Preference number: 4 (lower is better)
Translates to: LLISQYYKSTISAQHNHLRDSRI*AFCYTA
Trigger: TGCAGTGTAACAAAATGCTCAGATTCTGCTGTCTCT...CAAATGATTGTGTTGTGCTGAAATGGTGCTCTTATAGTACTGGCTTATTAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp CTTTTAATAAGCCAGTACTATAAGAGCACCATTTCAGCACAACACAATCATTTGTTTCTCAACATGTTCTaGAAGCGTGTCATGAACACC +
Preference number: 4 (lower is better)
Translates to: LLISQYYKSTISAQHNHLFLNMF*KRVMNT
Trigger: GGTGTTCATGACACGCTTTCAGAACATGTTGAGAAA...CAAATGATTGTGTTGTGCTGAAATGGTGCTCTTATAGTACTGGCTTATTAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp GTGAAAATAGTTTATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACGTAATTTGCATGATTaGGCCAGTTGTTTATCTTTC +
Preference number: 4 (lower is better)
Translates to: VKIVYMGKRYDGSECCQERNLHD*ASCLSF
Trigger: GAAAGATAAACAACTGGCTCAATCATGCAAATTACG...TTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATAAACTATTTTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp GAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTAGGAGATCTTTTAGGTTGGGTTTTGCATTaGTATAGGTCAGGAGTTCAT +
Preference number: 4 (lower is better)
Translates to: ELEHCKSTLCIFHLGDLLGWVLH*YRSGVH
Trigger: ATGAACTCCTGACCTATATCAATGCAAAACCCAACC...TAAAAGATCTCCTAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp GAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTAGGAGATCTTTTAAGTCACAATTGGGGTTaGGAGGGAATTTCTCAACAT +
Preference number: 4 (lower is better)
Translates to: ELEHCKSTLCIFHLGDLLSHNWG*EGISQH
Trigger: ATGTTGAGAAATTCCCTCCCAACCCCAATTGTGACT...TAAAAGATCTCCTAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp TATAACTGTGAAGGCAATATTGCTGTAAGAGAGGAATTGGAGCATTGTAAATCTACAAGCCAAACCAACTaGGCTTGTTTTCTTTCCTTG +
Preference number: 4 (lower is better)
Translates to: YNCEGNIAVREELEHCKSTSQTN*ACFLSL
Trigger: CAAGGAAAGAAAACAAGCCCAGTTGGTTTGGCTTGT...AGATTTACAATGCTCCAATTCCTCTCTTACAGCAATATTGCCTTCACAGTTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp GAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTAGGAGATCTTTTAACTTTCAAAGGGAGATaGAGACTCTTGTACAACTCG +
Preference number: 4 (lower is better)
Translates to: ELEHCKSTLCIFHLGDLLTFKGR*RLLYNS
Trigger: CGAGTTGTACAAGAGTCTCCATCTCCCTTTGAAAGT...TAAAAGATCTCCTAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp CTTTTAATAAGCCAGTACTATAAGAGCACCATTTCAGCACAACACAATCATTTGACTTTCAAAGGGAGATaGAGACTCTTGTACAACTCG +
Preference number: 4 (lower is better)
Translates to: LLISQYYKSTISAQHNHLTFKGR*RLLYNS
Trigger: CGAGTTGTACAAGAGTCTCCATCTCCCTTTGAAAGT...CAAATGATTGTGTTGTGCTGAAATGGTGCTCTTATAGTACTGGCTTATTAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp CTTTTAATAAGCCAGTACTATAAGAGCACCATTTCAGCACAACACAATCATTTGTTATATTGCCGGCTATaGAAGTACTGGCCTTTAAAG +
Preference number: 4 (lower is better)
Translates to: LLISQYYKSTISAQHNHLLYCRL*KYWPLK
Trigger: CTTTAAAGGCCAGTACTTTCATAGCCGGCAATATAA...CAAATGATTGTGTTGTGCTGAAATGGTGCTCTTATAGTACTGGCTTATTAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp GAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTAGGAGATCTTTTATTATATTGCCGGCTATaGAAGTACTGGCCTTTAAAG +
Preference number: 4 (lower is better)
Translates to: ELEHCKSTLCIFHLGDLLLYCRL*KYWPLK
Trigger: CTTTAAAGGCCAGTACTTTCATAGCCGGCAATATAA...TAAAAGATCTCCTAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR GCA 90 bp CTTTTAATAAGCCAGTACTATAAGAGCACCATTTCAGCACAACACAATCATTTGTGGCTTTTGCAGATGTaGAGGGAAGATATACTTGTA +
Preference number: 4 (lower is better)
Translates to: LLISQYYKSTISAQHNHLWLLQM*REDILV
Trigger: TACAAGTATATCTTCCCTGCACATCTGCAAAAGCCA...CAAATGATTGTGTTGTGCTGAAATGGTGCTCTTATAGTACTGGCTTATTAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp CTTTTAATAAGCCAGTACTATAAGAGCACCATTTCAGCACAACACAATCATTTGAAAGGCATTAATACCTaGAAAGGAATCCAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: LLISQYYKSTISAQHNHLKGINT*KGIQWQ
Trigger: TTGCCACTGGATTCCTTTCCAGGTATTAATGCCTTT...CAAATGATTGTGTTGTGCTGAAATGGTGCTCTTATAGTACTGGCTTATTAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp GAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTAGGAGATCTTTTACGTAATTTGCATGATTaGGCCAGTTGTTTATCTTTC +
Preference number: 4 (lower is better)
Translates to: ELEHCKSTLCIFHLGDLLRNLHD*ASCLSF
Trigger: GAAAGATAAACAACTGGCTCAATCATGCAAATTACG...TAAAAGATCTCCTAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR TCA 90 bp CTTTTAATAAGCCAGTACTATAAGAGCACCATTTCAGCACAACACAATCATTTGTTTAGGTCTAGCTGTTaGCTTATGGATAAAGATGCT +
Preference number: 4 (lower is better)
Translates to: LLISQYYKSTISAQHNHLFRSSC*LMDKDA
Trigger: AGCATCTTTATCCATAAGTCAACAGCTAGACCTAAA...CAAATGATTGTGTTGTGCTGAAATGGTGCTCTTATAGTACTGGCTTATTAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR GCA 90 bp TATAACTGTGAAGGCAATATTGCTGTAAGAGAGGAATTGGAGCATTGTAAATCTCCAACAACCTTCAAATaGACAGAAGTCTTAGTTATC +
Preference number: 4 (lower is better)
Translates to: YNCEGNIAVREELEHCKSPTTFK*TEVLVI
Trigger: GATAACTAAGACTTCTGTGCATTTGAAGGTTGTTGG...AGATTTACAATGCTCCAATTCCTCTCTTACAGCAATATTGCCTTCACAGTTATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CCA 90 bp GAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTAGGAGATCTTTTAATTTGGCACATAGTTTaGATAATCTTCTGGGAATGG +
Preference number: 4 (lower is better)
Translates to: ELEHCKSTLCIFHLGDLLIWHIV*IIFWEW
Trigger: CCATTCCCAGAAGATTATCCAAACTATGTGCCAAAT...TAAAAGATCTCCTAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp AGCTGGGAGAGGCTCAGGAATACCAGTGGTAGCCCTGGGGCCAGCCAGGGAAGCATGGAGCCCAAGGGTTaGATGAGGCCAATAATGGCC +
Preference number: 5 (lower is better)
Translates to: SWERLRNTSGSPGASQGSMEPKG*MRPIMA
Trigger: GGCCATTATTGGCCTCATCAAACCCTTGGGCTCCAT...GCTTCCCTGGCTGGCCCCAGGGCTACCACTGGTATTCCTGAGCCTCTCCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp AGCTGGGAGAGGCTCAGGAATACCAGTGGTAGCCCTGGGGCCAGCCAGGGAAGCAACAGCCCACCGAGCTaGTGTTTCTCCTGTAGGTAT +
Preference number: 5 (lower is better)
Translates to: SWERLRNTSGSPGASQGSNSPPS*CFSCRY
Trigger: ATACCTACAGGAGAAACACAAGCTCGGTGGGCTGTT...GCTTCCCTGGCTGGCCCCAGGGCTACCACTGGTATTCCTGAGCCTCTCCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp AGCTGGGAGAGGCTCAGGAATACCAGTGGTAGCCCTGGGGCCAGCCAGGGAAGCTCAACCAAGTCACAATaGGGGTTGGGAGGGAATTTC +
Preference number: 5 (lower is better)
Translates to: SWERLRNTSGSPGASQGSSTKSQ*GLGGNF
Trigger: GAAATTCCCTCCCAACCCCAATTGTGACTTGGTTGA...GCTTCCCTGGCTGGCCCCAGGGCTACCACTGGTATTCCTGAGCCTCTCCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp AGCTGGGAGAGGCTCAGGAATACCAGTGGTAGCCCTGGGGCCAGCCAGGGAAGCGGGAGATGGAGACTCTaGTACAACTCGAGCTTTGAT +
Preference number: 5 (lower is better)
Translates to: SWERLRNTSGSPGASQGSGRWRL*YNSSFD
Trigger: ATCAAAGCTCGAGTTGTACAAGAGTCTCCATCTCCC...GCTTCCCTGGCTGGCCCCAGGGCTACCACTGGTATTCCTGAGCCTCTCCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp ATGGTGAGCATGGGCCAAAGAAGACGGTCAGAGCCAGATGTGGATCCGTTAGGACTGCAGACTTTGGTCTaGCCTGGTGCAGTATGCGGG +
Preference number: 5 (lower is better)
Translates to: MVSMGQRRRSEPDVDPLGLQTLV*PGAVCG
Trigger: CCCGCATACTGCACCAGGCAAGACCAAAGTCTGCAG...TCCTAACGGATCCACATCTGGCTCTGACCGTCTTCTTTGGCCCATGCTCACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR CAA 90 bp AGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCAGTGGTAGCCCTGGGGAACAGCCCACCGAGCTaGTGTTTCTCCTGTAGGTAT +
Preference number: 5 (lower is better)
Translates to: SIRSGAGRGSGIPVVALGNSPPS*CFSCRY
Trigger: ATACCTACAGGAGAAACACAAGCTCGGTGGGCTGTT...CCCCAGGGCTACCACTGGTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS GCA 90 bp CTGACCCCAGCTCCCACAATGGCAACTCGCTTGGCCATGTTCTCCTaGATGAGGAAGATGAAGCAGGCTTTTTATTCACAAGCTCCACCC +
Preference number: 5 (lower is better)
Translates to: LTPAPTMATRLAMFS*MRKMKQAFYSQAPP
Trigger: GGGTGGAGCTTGTGAATAAAAAGCCTGCTTCATCTTCCTCATGCAGGAGAACATGGCCAAGCGAGTTGCCATTGTGGGAGCTGGGGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354841.4
CDS-3UTR CAA 90 bp AGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCAGTGGTAGCCCTGGGGTCAACCAAGTCACAATaGGGGTTGGGAGGGAATTTC +
Preference number: 5 (lower is better)
Translates to: SIRSGAGRGSGIPVVALGSTKSQ*GLGGNF
Trigger: GAAATTCCCTCCCAACCCCAATTGTGACTTGGTTGA...CCCCAGGGCTACCACTGGTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS TCA 90 bp GCCACGCAGGACTCTGGTATTAGCAGAGATCAAAATGAATCAGTATaGGCCAGTGCTGGCTTGGGAGTCCCCAGCACAGTGGATAAACCT +
Preference number: 5 (lower is better)
Translates to: ATQDSGISRDQNESV*ASAGLGVPSTVDKP
Trigger: AGGTTTATCCACTGTGCTGGGGACTCCCAAGCCAGCACTGGCTCATACTGATTCATTTTGATCTCTGCTAATACCAGAGTCCTGCGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367750.7
ENST00000402921.6
ENST00000617670.6
CDS-3UTR CAA 90 bp GCCCGAGTCAAAGATTCGGCTGATCACCCATCCCCCTCCGGTGGTGCTGAGGAAAATTTGGCACATAGTTaGGATAATCTTCTGGGAATG +
Preference number: 5 (lower is better)
Translates to: ARVKDSADHPSPSGGAEENLAHS*DNLLGM
Trigger: CATTCCCAGAAGATTATCCAAACTATGTGCCAAATT...TTCCTCAGCACCACCGGAGGGGGATGGGTGATCAGCCGAATCTTTGACTCGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR CAA 90 bp AGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCAGTGGTAGCCCTGGGGCAGAATCTGAGCATTTaGTTACACTGCAGACTTTGG +
Preference number: 5 (lower is better)
Translates to: SIRSGAGRGSGIPVVALGQNLSI*LHCRLW
Trigger: CCAAAGTCTGCAGTGTAACAAAATGCTCAGATTCTG...CCCCAGGGCTACCACTGGTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp ATGGTGAGCATGGGCCAAAGAAGACGGTCAGAGCCAGATGTGGATCCGTTAGGATCAACCAAGTCACAATaGGGGTTGGGAGGGAATTTC +
Preference number: 5 (lower is better)
Translates to: MVSMGQRRRSEPDVDPLGSTKSQ*GLGGNF
Trigger: GAAATTCCCTCCCAACCCCAATTGTGACTTGGTTGA...TCCTAACGGATCCACATCTGGCTCTGACCGTCTTCTTTGGCCCATGCTCACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS CCA 90 bp GGCAACTCGCTTGGCCATGTTCTCAGTTGTCAAGGCTGTAGCTTCTaGCAGAGCTGCTGGAATTGGACCTTTTACTGGATAAAGTCTTGC +
Preference number: 5 (lower is better)
Translates to: GNSLGHVLSCQGCSF*QSCWNWTFYWIKSC
Trigger: GCAAGACTTTATCCAGTAAAAGGTCCAATTCCAGCAGCTCTGCCAGAAGCTACAGCCTTGACAACTGAGAACATGGCCAAGCGAGTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR CAA 90 bp CTTAGTTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACAGTGACCACCTCCCATaGGCCAGAGACAGCAGAATC +
Preference number: 5 (lower is better)
Translates to: LSYHSLALEVELGEAQEYSDHLP*ARDSRI
Trigger: GATTCTGCTGTCTCTGGCCAATGGGAGGTGGTCACT...GTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAACTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp TTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCAGTGATGGAGCCCAAGGGTTaGATGAGGCCAATAATGGCC +
Preference number: 5 (lower is better)
Translates to: LSFSSIRSGAGRGSGIPVMEPKG*MRPIMA
Trigger: GGCCATTATTGGCCTCATCAAACCCTTGGGCTCCAT...CACTGGTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp TTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCAGTGCGAGCTTTGATGACCTaGAATGTTCGGTCCCACTGG +
Preference number: 5 (lower is better)
Translates to: LSFSSIRSGAGRGSGIPVRALMT*NVRSHW
Trigger: CCAGTGGGACCGAACATTCAAGGTCATCAAAGCTCG...CACTGGTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp ACAGTGAGGCCTGGCCATCTTCAACTTTCACTACAGACTCATCAAGGAAGGGGAGGGAGATGGAGACTCTaGTACAACTCGAGCTTTGAT +
Preference number: 5 (lower is better)
Translates to: TVRPGHLQLSLQTHQGRGGRWRL*YNSSFD
Trigger: ATCAAAGCTCGAGTTGTACAAGAGTCTCCATCTCCC...TCCCCTTCCTTGATGAGTCTGTAGTGAAAGTTGAAGATGGCCAGGCCTCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS GCA 90 bp CTTGGCCATGTTCTCAGTTGTCAAGGCTGTAGCTTCTGGCAGAGCTaGTGGAATTGGACCTTTTACTGGATAAAGTCTTGCACTTCAGAC +
Preference number: 5 (lower is better)
Translates to: LGHVLSCQGCSFWQS*WNWTFYWIKSCTSD
Trigger: GTCTGAAGTGCAAGACTTTATCCAGTAAAAGGTCCAATTCCAGCAGCTCTGCCAGAAGCTACAGCCTTGACAACTGAGAACATGGCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR CAA 90 bp TATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTTCTTTCAGTGACCACCTCCCATaGGCCAGAGACAGCAGAATC +
Preference number: 5 (lower is better)
Translates to: YMGKRYDGSECCQEQLSFSDHLP*ARDSRI
Trigger: GATTCTGCTGTCTCTGGCCAATGGGAGGTGGTCACT...GAAAGAAAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp CTGACTGGTTGTATGCTCCTGGTAATAATGCCGTCAGCTGAAAAGATAAGCATCGCAGGGAAGATATACTaGTACAGTGAGGCCTGGCCA +
Preference number: 5 (lower is better)
Translates to: LTGCMLLVIMPSAEKISIAGKIY*YSEAWP
Trigger: TGGCCAGGCCTCACTGTACAAGTATATCTTCCCTGC...GATGCTTATCTTTTCAGCTGACGGCATTATTACCAGGAGCATACAACCAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR CAA 90 bp CCTGAGCTGACTGGTTGTATGCTCCTGGTAATAATGCCGTCAGCTGAAAAGATAACAATGGCAACTCGCTaGGCCATGTTCTCAGTTGTC +
Preference number: 5 (lower is better)
Translates to: PELTGCMLLVIMPSAEKITMATR*AMFSVV
Trigger: GACAACTGAGAACATGGCCAAGCGAGTTGCCATTGT...TATCTTTTCAGCTGACGGCATTATTACCAGGAGCATACAACCAGTCAGCTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR CAA 90 bp TATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTTCTTTCGCAGGGAAGATATACTaGTACAGTGAGGCCTGGCCA +
Preference number: 5 (lower is better)
Translates to: YMGKRYDGSECCQEQLSFAGKIY*YSEAWP
Trigger: TGGCCAGGCCTCACTGTACAAGTATATCTTCCCTGC...GAAAGAAAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp CTTAGTTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACAACAGCCCACCGAGCTaGTGTTTCTCCTGTAGGTAT +
Preference number: 5 (lower is better)
Translates to: LSYHSLALEVELGEAQEYNSPPS*CFSCRY
Trigger: ATACCTACAGGAGAAACACAAGCTCGGTGGGCTGTT...GTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAACTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS GCA 90 bp GATAATCTTCTGGGAATGGAAAGTCTGAGTAACAAGACATCTCCTTaGAGCTGTTGGAAACCACAGACTTGTAGAGACTGGCTCTGCCTT +
Preference number: 5 (lower is better)
Translates to: DNLLGMESLSNKTSP*SCWKPQTCRDWLCL
Trigger: AAGGCAGAGCCAGTCTCTACAAGTCTGTGGTTTCCAACAGCTGCAAGGAGATGTCTTGTTACTCAGACTTTCCATTCCCAGAAGATTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000459868.1
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp GTGAAAATAGTTTATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAAAGTGACCACCTCCCATaGGCCAGAGACAGCAGAATC +
Preference number: 5 (lower is better)
Translates to: VKIVYMGKRYDGSECCQESDHLP*ARDSRI
Trigger: GATTCTGCTGTCTCTGGCCAATGGGAGGTGGTCACT...TTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATAAACTATTTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp ATAGTTTATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTATGGAGCCCAAGGGTTaGATGAGGCCAATAATGGCC +
Preference number: 5 (lower is better)
Translates to: IVYMGKRYDGSECCQEQLMEPKG*MRPIMA
Trigger: GGCCATTATTGGCCTCATCAAACCCTTGGGCTCCAT...AAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATAAACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp ATAGTTTATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTCGAGCTTTGATGACCTaGAATGTTCGGTCCCACTGG +
Preference number: 5 (lower is better)
Translates to: IVYMGKRYDGSECCQEQLRALMT*NVRSHW
Trigger: CCAGTGGGACCGAACATTCAAGGTCATCAAAGCTCG...AAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATAAACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp GATGTGCAGGGAAGATATACTTGTACAGTGAGGCCTGGCCATCTTCAACTTTCATGTACAACTCGAGCTTaGATGACCTTGAATGTTCGG +
Preference number: 5 (lower is better)
Translates to: DVQGRYTCTVRPGHLQLSCTTRA*MTLNVR
Trigger: CCGAACATTCAAGGTCATCAAAGCTCGAGTTGTACA...TGAAAGTTGAAGATGGCCAGGCCTCACTGTACAAGTATATCTTCCCTGCACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR CAA 90 bp CTTAGTTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACGGGAGATGGAGACTCTaGTACAACTCGAGCTTTGAT +
Preference number: 5 (lower is better)
Translates to: LSYHSLALEVELGEAQEYGRWRL*YNSSFD
Trigger: ATCAAAGCTCGAGTTGTACAAGAGTCTCCATCTCCC...GTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAACTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp GCTGTAAGAGAGGAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTAACAATGGCAACTCGCTaGGCCATGTTCTCCTGCATG +
Preference number: 5 (lower is better)
Translates to: AVREELEHCKSTLCIFHLTMATR*AMFSCM
Trigger: CATGCAGGAGAACATGGCCAAGCGAGTTGCCATTGT...TAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTCCTCTCTTACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354841.4
CDS-3UTR CAA 90 bp GCTGTAAGAGAGGAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTAGCAGGGAAGATATACTaGTACAGTGAGGCCTGGCCA +
Preference number: 5 (lower is better)
Translates to: AVREELEHCKSTLCIFHLAGKIY*YSEAWP
Trigger: TGGCCAGGCCTCACTGTACAAGTATATCTTCCCTGC...TAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTCCTCTCTTACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp ATAGTTTATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTAACAGCCCACCGAGCTaGTGTTTCTCCTGTAGGTAT +
Preference number: 5 (lower is better)
Translates to: IVYMGKRYDGSECCQEQLNSPPS*CFSCRY
Trigger: ATACCTACAGGAGAAACACAAGCTCGGTGGGCTGTT...AAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATAAACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp GTGAAAATAGTTTATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACGAGCTTTGATGACCTaGAATGTTCGGTCCCACTGG +
Preference number: 5 (lower is better)
Translates to: VKIVYMGKRYDGSECCQERALMT*NVRSHW
Trigger: CCAGTGGGACCGAACATTCAAGGTCATCAAAGCTCG...TTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATAAACTATTTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp CTTAGTTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACTGTACAACTCGAGCTTaGATGACCTTGAATGTTCGG +
Preference number: 5 (lower is better)
Translates to: LSYHSLALEVELGEAQEYCTTRA*MTLNVR
Trigger: CCGAACATTCAAGGTCATCAAAGCTCGAGTTGTACA...GTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAACTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp CTTAGTTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACTTACTGGATAAAGTCTaGCACTTCAGACTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: LSYHSLALEVELGEAQEYLLDKV*HFRLSC
Trigger: GCAGCTCAGTCTGAAGTGCAAGACTTTATCCAGTAA...GTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAACTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR CAA 90 bp AGTATCCAGAATCACATGGCACACCAAAAACACATGCCCTGCTATTTCTTATACGTTACACTGCAGACTTaGGTCTTGCCTGGTGCAGTA +
Preference number: 5 (lower is better)
Translates to: SIQNHMAHQKHMPCYFLYVTLQT*VLPGAV
Trigger: TACTGCACCAGGCAAGACCAAAGTCTGCAGTGTAAC...GTATAAGAAATAGCAGGGCATGTGTTTTTGGTGTGCCATGTGATTCTGGATACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR CAA 90 bp TGGAGACTCTTGTACAACTCGAGCTTTGATGACCTTGAATGTTCGGTCCCACTGCCAGGAATTGAGAATTaGGCACATAGTTTGGATAAT +
Preference number: 5 (lower is better)
Translates to: WRLLYNSSFDDLECSVPLPGIEN*AHSLDN
Trigger: ATTATCCAAACTATGTGCCAAATTCTCAATTCCTGG...CAGTGGGACCGAACATTCAAGGTCATCAAAGCTCGAGTTGTACAAGAGTCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR CAA 90 bp TATAACTGTGAAGGCAATATTGCTGTAAGAGAGGAATTGGAGCATTGTAAATCTAGTGACCACCTCCCATaGGCCAGAGACAGCAGAATC +
Preference number: 5 (lower is better)
Translates to: YNCEGNIAVREELEHCKSSDHLP*ARDSRI
Trigger: GATTCTGCTGTCTCTGGCCAATGGGAGGTGGTCACT...AGATTTACAATGCTCCAATTCCTCTCTTACAGCAATATTGCCTTCACAGTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp GCTGTAAGAGAGGAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTAAACAGCCCACCGAGCTaGTGTTTCTCCTGTAGGTAT +
Preference number: 5 (lower is better)
Translates to: AVREELEHCKSTLCIFHLNSPPS*CFSCRY
Trigger: ATACCTACAGGAGAAACACAAGCTCGGTGGGCTGTT...TAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTCCTCTCTTACAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp CTTAGTTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACCCAAACCAACTGGGCTaGTTTTCTTTCCTTGCATTA +
Preference number: 5 (lower is better)
Translates to: LSYHSLALEVELGEAQEYPNQLG*FSFLAL
Trigger: TAATGCAAGGAAAGAAAACAAGCCCAGTTGGTTTGG...GTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAACTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp TATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTTCTTTCACAATGGCAACTCGCTaGGCCATGTTCTCTTGTAAT +
Preference number: 5 (lower is better)
Translates to: YMGKRYDGSECCQEQLSFTMATR*AMFSCN
Trigger: ATTACAAGAGAACATGGCCAAGCGAGTTGCCATTGT...GAAAGAAAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367750.7
CDS-3UTR CAA 90 bp GCTGTAAGAGAGGAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTATCAACCAAGTCACAATaGGGGTTGGGAGGGAATTTC +
Preference number: 5 (lower is better)
Translates to: AVREELEHCKSTLCIFHLSTKSQ*GLGGNF
Trigger: GAAATTCCCTCCCAACCCCAATTGTGACTTGGTTGA...TAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTCCTCTCTTACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp GTGAAAATAGTTTATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAATCAACCAAGTCACAATaGGGGTTGGGAGGGAATTTC +
Preference number: 5 (lower is better)
Translates to: VKIVYMGKRYDGSECCQESTKSQ*GLGGNF
Trigger: GAAATTCCCTCCCAACCCCAATTGTGACTTGGTTGA...TTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATAAACTATTTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp TATAACTGTGAAGGCAATATTGCTGTAAGAGAGGAATTGGAGCATTGTAAATCTGCAGGGAAGATATACTaGTACAGTGAGGCCTGGCCA +
Preference number: 5 (lower is better)
Translates to: YNCEGNIAVREELEHCKSAGKIY*YSEAWP
Trigger: TGGCCAGGCCTCACTGTACAAGTATATCTTCCCTGC...AGATTTACAATGCTCCAATTCCTCTCTTACAGCAATATTGCCTTCACAGTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp GAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTAGGAGATCTTTTAATGGAGCCCAAGGGTTaGATGAGGCCAATAATGGCC +
Preference number: 5 (lower is better)
Translates to: ELEHCKSTLCIFHLGDLLMEPKG*MRPIMA
Trigger: GGCCATTATTGGCCTCATCAAACCCTTGGGCTCCAT...TAAAAGATCTCCTAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp TATAACTGTGAAGGCAATATTGCTGTAAGAGAGGAATTGGAGCATTGTAAATCTCGAGCTTTGATGACCTaGAATGTTCGGTCCCACTGG +
Preference number: 5 (lower is better)
Translates to: YNCEGNIAVREELEHCKSRALMT*NVRSHW
Trigger: CCAGTGGGACCGAACATTCAAGGTCATCAAAGCTCG...AGATTTACAATGCTCCAATTCCTCTCTTACAGCAATATTGCCTTCACAGTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp CTTTTAATAAGCCAGTACTATAAGAGCACCATTTCAGCACAACACAATCATTTGCGAGCTTTGATGACCTaGAATGTTCGGTCCCACTGG +
Preference number: 5 (lower is better)
Translates to: LLISQYYKSTISAQHNHLRALMT*NVRSHW
Trigger: CCAGTGGGACCGAACATTCAAGGTCATCAAAGCTCG...CAAATGATTGTGTTGTGCTGAAATGGTGCTCTTATAGTACTGGCTTATTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp ATAGTTTATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTTGTACAACTCGAGCTTaGATGACCTTGAATGTTCGG +
Preference number: 5 (lower is better)
Translates to: IVYMGKRYDGSECCQEQLCTTRA*MTLNVR
Trigger: CCGAACATTCAAGGTCATCAAAGCTCGAGTTGTACA...AAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATAAACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp TATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTTCTTTCAGTACCAGCTACTCATaGATCCTTCTGGCAAAAATG +
Preference number: 5 (lower is better)
Translates to: YMGKRYDGSECCQEQLSFSTSYS*ILLAKM
Trigger: CATTTTTGCCAGAAGGATCAATGAGTAGCTGGTACT...GAAAGAAAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR CAA 90 bp CTTAGTTATCATTCTCTAGCATTAGAAGTGGAGCTGGGAGAGGCTCAGGAATACATCACAAGGACTCTCTaGTCCTTAAATATATCTGGA +
Preference number: 5 (lower is better)
Translates to: LSYHSLALEVELGEAQEYITRTL*SLNISG
Trigger: TCCAGATATATTTAAGGACAAGAGAGTCCTTGTGAT...GTATTCCTGAGCCTCTCCCAGCTCCACTTCTAATGCTAGAGAATGATAACTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp ATAGTTTATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTCCAAACCAACTGGGCTaGTTTTCTTTCCTTGCATTA +
Preference number: 5 (lower is better)
Translates to: IVYMGKRYDGSECCQEQLPNQLG*FSFLAL
Trigger: TAATGCAAGGAAAGAAAACAAGCCCAGTTGGTTTGG...AAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATAAACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp GCTGTAAGAGAGGAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTAGCAGAGCTGCTGGAATaGGACCTTTTACTGGATAAA +
Preference number: 5 (lower is better)
Translates to: AVREELEHCKSTLCIFHLAELLE*DLLLDK
Trigger: TTTATCCAGTAAAAGGTCCAATTCCAGCAGCTCTGC...TAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTCCTCTCTTACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR CAA 90 bp TATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTTCTTTCAATCTCACAACTAGTTaGGCTGAATGTTGTCACTCA +
Preference number: 5 (lower is better)
Translates to: YMGKRYDGSECCQEQLSFNLTTS*AECCHS
Trigger: TGAGTGACAACATTCAGCCAAACTAGTTGTGAGATT...GAAAGAAAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR CAA 90 bp TATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTTCTTTCCCAGGAATTGAGAATTaGGCACATAGTTTGGATAAT +
Preference number: 5 (lower is better)
Translates to: YMGKRYDGSECCQEQLSFPGIEN*AHSLDN
Trigger: ATTATCCAAACTATGTGCCAAATTCTCAATTCCTGG...GAAAGAAAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp ATAGTTTATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTGACTTTGGTCTTGAATaGAATGTGTTTCAGAAGGTC +
Preference number: 5 (lower is better)
Translates to: IVYMGKRYDGSECCQEQLDFGLE*NVFQKV
Trigger: GACCTTCTGAAACACATTCAATTCAAGACCAAAGTC...AAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATAAACTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000617670.6
CDS-3UTR CAA 90 bp GCTGTAAGAGAGGAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTACCAAACCAACTGGGCTaGTTTTCTTTCCTTGCATTA +
Preference number: 5 (lower is better)
Translates to: AVREELEHCKSTLCIFHLPNQLG*FSFLAL
Trigger: TAATGCAAGGAAAGAAAACAAGCCCAGTTGGTTTGG...TAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTCCTCTCTTACAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp GTGAAAATAGTTTATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACCAAACCAACTGGGCTaGTTTTCTTTCCTTGCATTA +
Preference number: 5 (lower is better)
Translates to: VKIVYMGKRYDGSECCQEPNQLG*FSFLAL
Trigger: TAATGCAAGGAAAGAAAACAAGCCCAGTTGGTTTGG...TTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATAAACTATTTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp TATAACTGTGAAGGCAATATTGCTGTAAGAGAGGAATTGGAGCATTGTAAATCTGGGAGATGGAGACTCTaGTACAACTCGAGCTTTGAT +
Preference number: 5 (lower is better)
Translates to: YNCEGNIAVREELEHCKSGRWRL*YNSSFD
Trigger: ATCAAAGCTCGAGTTGTACAAGAGTCTCCATCTCCC...AGATTTACAATGCTCCAATTCCTCTCTTACAGCAATATTGCCTTCACAGTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp ATAGTTTATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTGCTGTAAGAGAGGAATaGGAGCATTGTAAATCTACT +
Preference number: 5 (lower is better)
Translates to: IVYMGKRYDGSECCQEQLAVREE*EHCKST
Trigger: AGTAGATTTACAATGCTCCAATTCCTCTCTTACAGC...AAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATAAACTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp CTTTTAATAAGCCAGTACTATAAGAGCACCATTTCAGCACAACACAATCATTTGACAATGGCAACTCGCTaGGCCATGTTCTCTTTACGT +
Preference number: 5 (lower is better)
Translates to: LLISQYYKSTISAQHNHLTMATR*AMFSLR
Trigger: ACGTAAAGAGAACATGGCCAAGCGAGTTGCCATTGT...CAAATGATTGTGTTGTGCTGAAATGGTGCTCTTATAGTACTGGCTTATTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402921.6
ENST00000617670.6
CDS-3UTR CAA 90 bp ATAGTTTATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTCCAGGAATTGAGAATTaGGCACATAGTTTGGATAAT +
Preference number: 5 (lower is better)
Translates to: IVYMGKRYDGSECCQEQLPGIEN*AHSLDN
Trigger: ATTATCCAAACTATGTGCCAAATTCTCAATTCCTGG...AAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATAAACTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp GCTGTAAGAGAGGAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTAGACTTTGGTCTTGAATaGAATGTGTTTCAGAAGGTC +
Preference number: 5 (lower is better)
Translates to: AVREELEHCKSTLCIFHLDFGLE*NVFQKV
Trigger: GACCTTCTGAAACACATTCAATTCAAGACCAAAGTC...TAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTCCTCTCTTACAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000617670.6
CDS-3UTR CAA 90 bp GTGAAAATAGTTTATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAAGACTTTGGTCTTGAATaGAATGTGTTTCAGAAGGTC +
Preference number: 5 (lower is better)
Translates to: VKIVYMGKRYDGSECCQEDFGLE*NVFQKV
Trigger: GACCTTCTGAAACACATTCAATTCAAGACCAAAGTC...TTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATAAACTATTTTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000617670.6
CDS-3UTR CAA 90 bp AGTATCCAGAATCACATGGCACACCAAAAACACATGCCCTGCTATTTCTTATACATCACAAGGACTCTCTaGTCCTTAAATATATCTGGA +
Preference number: 5 (lower is better)
Translates to: SIQNHMAHQKHMPCYFLYITRTL*SLNISG
Trigger: TCCAGATATATTTAAGGACAAGAGAGTCCTTGTGAT...GTATAAGAAATAGCAGGGCATGTGTTTTTGGTGTGCCATGTGATTCTGGATACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS-3UTR CAA 90 bp ATAGTTTATATGGGAAAGAGGTATGATGGCTCAGAGTGCTGTCAAGAACAGCTTATCACAAGGACTCTCTaGTCCTTAAATATATCTGGA +
Preference number: 5 (lower is better)
Translates to: IVYMGKRYDGSECCQEQLITRTL*SLNISG
Trigger: TCCAGATATATTTAAGGACAAGAGAGTCCTTGTGAT...AAGCTGTTCTTGACAGCACTCTGAGCCATCATACCTCTTTCCCATATAAACTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp GAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTAGGAGATCTTTTATGTACAACTCGAGCTTaGATGACCTTGAATGTTCGG +
Preference number: 5 (lower is better)
Translates to: ELEHCKSTLCIFHLGDLLCTTRA*MTLNVR
Trigger: CCGAACATTCAAGGTCATCAAAGCTCGAGTTGTACA...TAAAAGATCTCCTAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp CTTTTAATAAGCCAGTACTATAAGAGCACCATTTCAGCACAACACAATCATTTGTGTACAACTCGAGCTTaGATGACCTTGAATGTTCGG +
Preference number: 5 (lower is better)
Translates to: LLISQYYKSTISAQHNHLCTTRA*MTLNVR
Trigger: CCGAACATTCAAGGTCATCAAAGCTCGAGTTGTACA...CAAATGATTGTGTTGTGCTGAAATGGTGCTCTTATAGTACTGGCTTATTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp GCTGTAAGAGAGGAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTAGCTGTAAGAGAGGAATaGGAGCATTGTAAATCTACT +
Preference number: 5 (lower is better)
Translates to: AVREELEHCKSTLCIFHLAVREE*EHCKST
Trigger: AGTAGATTTACAATGCTCCAATTCCTCTCTTACAGC...TAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTCCTCTCTTACAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp TATAACTGTGAAGGCAATATTGCTGTAAGAGAGGAATTGGAGCATTGTAAATCTGGAAGATTAGGCGATTaGCTCAGTTTGAATCTTCTG +
Preference number: 5 (lower is better)
Translates to: YNCEGNIAVREELEHCKSGRLGD*LSLNLL
Trigger: CAGAAGATTCAAACTGAGCAAATCGCCTAATCTTCC...AGATTTACAATGCTCCAATTCCTCTCTTACAGCAATATTGCCTTCACAGTTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354841.4
CDS-3UTR CAA 90 bp GCTGTAAGAGAGGAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTACCAGGAATTGAGAATTaGGCACATAGTTTGGATAAT +
Preference number: 5 (lower is better)
Translates to: AVREELEHCKSTLCIFHLPGIEN*AHSLDN
Trigger: ATTATCCAAACTATGTGCCAAATTCTCAATTCCTGG...TAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTCCTCTCTTACAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp GAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTAGGAGATCTTTTACAGAATCTGAGCATTTaGTTACACTGCAGACTTTGG +
Preference number: 5 (lower is better)
Translates to: ELEHCKSTLCIFHLGDLLQNLSI*LHCRLW
Trigger: CCAAAGTCTGCAGTGTAACAAAATGCTCAGATTCTG...TAAAAGATCTCCTAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp TATAACTGTGAAGGCAATATTGCTGTAAGAGAGGAATTGGAGCATTGTAAATCTCAGAATCTGAGCATTTaGTTACACTGCAGACTTTGG +
Preference number: 5 (lower is better)
Translates to: YNCEGNIAVREELEHCKSQNLSI*LHCRLW
Trigger: CCAAAGTCTGCAGTGTAACAAAATGCTCAGATTCTG...AGATTTACAATGCTCCAATTCCTCTCTTACAGCAATATTGCCTTCACAGTTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp GCTGTAAGAGAGGAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTAATCACAAGGACTCTCTaGTCCTTAAATATATCTGGA +
Preference number: 5 (lower is better)
Translates to: AVREELEHCKSTLCIFHLITRTL*SLNISG
Trigger: TCCAGATATATTTAAGGACAAGAGAGTCCTTGTGAT...TAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTCCTCTCTTACAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp TATAACTGTGAAGGCAATATTGCTGTAAGAGAGGAATTGGAGCATTGTAAATCTCCAAACCAACTGGGCTaGTTTTCTTTCCTTGCATTA +
Preference number: 5 (lower is better)
Translates to: YNCEGNIAVREELEHCKSPNQLG*FSFLAL
Trigger: TAATGCAAGGAAAGAAAACAAGCCCAGTTGGTTTGG...AGATTTACAATGCTCCAATTCCTCTCTTACAGCAATATTGCCTTCACAGTTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp CTTTTAATAAGCCAGTACTATAAGAGCACCATTTCAGCACAACACAATCATTTGAATTTGGCACATAGTTaGGATAATCTTCTGGGAATG +
Preference number: 5 (lower is better)
Translates to: LLISQYYKSTISAQHNHLNLAHS*DNLLGM
Trigger: CATTCCCAGAAGATTATCCAAACTATGTGCCAAATT...CAAATGATTGTGTTGTGCTGAAATGGTGCTCTTATAGTACTGGCTTATTAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp GAATTGGAGCATTGTAAATCTACTCTGTGCATCTTCCATTTAGGAGATCTTTTAAATTTGGCACATAGTTaGGATAATCTTCTGGGAATG +
Preference number: 5 (lower is better)
Translates to: ELEHCKSTLCIFHLGDLLNLAHS*DNLLGM
Trigger: CATTCCCAGAAGATTATCCAAACTATGTGCCAAATT...TAAAAGATCTCCTAAATGGAAGATGCACAGAGTAGATTTACAATGCTCCAATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000469112.5
ENST00000617670.6
CDS-3UTR CAA 90 bp CTTTTAATAAGCCAGTACTATAAGAGCACCATTTCAGCACAACACAATCATTTGATCACAAGGACTCTCTaGTCCTTAAATATATCTGGA +
Preference number: 5 (lower is better)
Translates to: LLISQYYKSTISAQHNHLITRTL*SLNISG
Trigger: TCCAGATATATTTAAGGACAAGAGAGTCCTTGTGAT...CAAATGATTGTGTTGTGCTGAAATGGTGCTCTTATAGTACTGGCTTATTAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000469112.5
ENST00000617670.6
CDS CAA 72 bp AGGCCGCTGACCCCAGCTCCCACAATGGCAACTCGCTaGGCCATGTTCTCCTGCATGAGGAAGATGAAGCAG +
Preference number: 6 (lower is better)
Translates to: RPLTPAPTMATR*AMFSCMRKMKQ
Trigger: CTGCTTCATCTTCCTCATGCAGGAGAACATGGCCAAGCGAGTTGCCATTGTGGGAGCTGGGGTCAGCGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354841.4
CDS CAA 72 bp AGGCCGCTGACCCCAGCTCCCACAATGGCAACTCGCTaGGCCATGTTCTCAGTTGTCAAGGCTGTAGCTTCT +
Preference number: 6 (lower is better)
Translates to: RPLTPAPTMATR*AMFSVVKAVAS
Trigger: AGAAGCTACAGCCTTGACAACTGAGAACATGGCCAAGCGAGTTGCCATTGTGGGAGCTGGGGTCAGCGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS CAA 90 bp ATGGAGGCCAGGCCGCTGACCCCAGCTCCCACAATGGCAACTCGCTaGGCCATGTTCTCCTGCATGAGGAAGATGAAGCAGGCTTTTTAT +
Preference number: 6 (lower is better)
Translates to: MEARPLTPAPTMATR*AMFSCMRKMKQAFY
Trigger: ATAAAAAGCCTGCTTCATCTTCCTCATGCAGGAGAACATGGCCAAGCGAGTTGCCATTGTGGGAGCTGGGGTCAGCGGCCTGGCCTCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354841.4
CDS CAA 72 bp AGGCCGCTGACCCCAGCTCCCACAATGGCAACTCGCTaGGCCATGTTCTCTTGTAATTTCTGGTGCCAATGG +
Preference number: 6 (lower is better)
Translates to: RPLTPAPTMATR*AMFSCNFWCQW
Trigger: CCATTGGCACCAGAAATTACAAGAGAACATGGCCAAGCGAGTTGCCATTGTGGGAGCTGGGGTCAGCGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367750.7
CDS CAA 72 bp AGCCAAACCTTTCAGGACTCGAACAGCCCACCGAGCTaGTGTTTCTCCTGTAGGTATCATGGAGCCCAAGGG +
Preference number: 6 (lower is better)
Translates to: SQTFQDSNSPPS*CFSCRYHGAQG
Trigger: CCCTTGGGCTCCATGATACCTACAGGAGAAACACAAGCTCGGTGGGCTGTTCGAGTCCTGAAAGGTTTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469711.1
CDS CAA 72 bp AGGCCGCTGACCCCAGCTCCCACAATGGCAACTCGCTaGGCCATGTTCTCTTTACGTACTTGTAATTTCTGG +
Preference number: 6 (lower is better)
Translates to: RPLTPAPTMATR*AMFSLRTCNFW
Trigger: CCAGAAATTACAAGTACGTAAAGAGAACATGGCCAAGCGAGTTGCCATTGTGGGAGCTGGGGTCAGCGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402921.6
ENST00000617670.6
CDS CAA 72 bp ATTTACACCTTTCAGGACTCGAACAGCCCACCGAGCTaGTGTTTCTCCTGTAGGTATCATGGAGCCCAAGGG +
Preference number: 6 (lower is better)
Translates to: IYTFQDSNSPPS*CFSCRYHGAQG
Trigger: CCCTTGGGCTCCATGATACCTACAGGAGAAACACAAGCTCGGTGGGCTGTTCGAGTCCTGAAAGGTGTAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000402921.6
ENST00000617670.6
CDS TCA 72 bp GACTCTGGTATTAGCAGAGATCAAAATGAATCAGTATaGGCCAGTGCTGGCTTGGGAGTCCCCAGCACAGTG +
Preference number: 6 (lower is better)
Translates to: DSGISRDQNESV*ASAGLGVPSTV
Trigger: CACTGTGCTGGGGACTCCCAAGCCAGCACTGGCTCATACTGATTCATTTTGATCTCTGCTAATACCAGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367750.7
ENST00000402921.6
ENST00000617670.6
CDS TCA 72 bp TGGACCTTTTACTGGATAAAGTCTTGCACTTCAGACTaGGCTGCTGCCTCTAGTCTCCATTCTGTGGCCCTA +
Preference number: 6 (lower is better)
Translates to: WTFYWIKSCTSD*AAASSLHSVAL
Trigger: TAGGGCCACAGAATGGAGACTAGAGGCAGCAGCTCAGTCTGAAGTGCAAGACTTTATCCAGTAAAAGGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS GCA 72 bp GCTCCCACAATGGCAACTCGCTTGGCCATGTTCTCCTaGATGAGGAAGATGAAGCAGGCTTTTTATTCACAA +
Preference number: 6 (lower is better)
Translates to: APTMATRLAMFS*MRKMKQAFYSQ
Trigger: TTGTGAATAAAAAGCCTGCTTCATCTTCCTCATGCAGGAGAACATGGCCAAGCGAGTTGCCATTGTGGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354841.4
CDS CCA 72 bp CTTGGCCATGTTCTCAGTTGTCAAGGCTGTAGCTTCTaGCAGAGCTGCTGGAATTGGACCTTTTACTGGATA +
Preference number: 6 (lower is better)
Translates to: LGHVLSCQGCSF*QSCWNWTFYWI
Trigger: TATCCAGTAAAAGGTCCAATTCCAGCAGCTCTGCCAGAAGCTACAGCCTTGACAACTGAGAACATGGCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS GCA 72 bp CTGGGAATGGAAAGTCTGAGTAACAAGACATCTCCTTaGAGCTGTTGGAAACCACAGACTTGTAGAGACTGG +
Preference number: 6 (lower is better)
Translates to: LGMESLSNKTSP*SCWKPQTCRDW
Trigger: CCAGTCTCTACAAGTCTGTGGTTTCCAACAGCTGCAAGGAGATGTCTTGTTACTCAGACTTTCCATTCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354841.4
ENST00000367750.7
ENST00000459868.1
ENST00000469112.5
ENST00000617670.6
CDS GCA 72 bp GTTCTCAGTTGTCAAGGCTGTAGCTTCTGGCAGAGCTaGTGGAATTGGACCTTTTACTGGATAAAGTCTTGC +
Preference number: 6 (lower is better)
Translates to: VLSCQGCSFWQS*WNWTFYWIKSC
Trigger: GCAAGACTTTATCCAGTAAAAGGTCCAATTCCAGCAGCTCTGCCAGAAGCTACAGCCTTGACAACTGAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5
CDS CCA 72 bp CTCAGTTGTCAAGGCTGTAGCTTCTGGCAGAGCTGCTaGAATTGGACCTTTTACTGGATAAAGTCTTGCACT +
Preference number: 6 (lower is better)
Translates to: LSCQGCSFWQSC*NWTFYWIKSCT
Trigger: AGTGCAAGACTTTATCCAGTAAAAGGTCCAATTCCAGCAGCTCTGCCAGAAGCTACAGCCTTGACAACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469112.5