RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FMNL2 (Homo sapiens)

Ensembl gene IDs: ENSG00000157827

Ensembl transcript IDs: ENST00000288670.14, ENST00000475377.2, ENST00000492942.1, ENST00000497192.1

Found 341 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGGTTCACATTGTTATTTCGGCACCATTAACAGAACGCAAGTTCTaGTCATCAAAGCGCCGCCTGACGCTTCTCCTCACCGCATCGGCT +
Preference number: 1 (lower is better)
Translates to: QVHIVISAPLTERKF*SSKRRLTLLLTASA
Trigger: AGCCGATGCGGTGAGGAGAAGCGTCAGGCGGCGCTTTGATGATCAGAACTTGCGTTCTGTTAATGGTGCCGAAATAACAATGTGAACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475377.2
3UTR GCA 90 bp ATAAAGTTCATGTGGGCAGTTTCATTCACGCACACCCTGTATTCATaGAGGCCAGTCTCAGGTTCACATTGTTATTTCGGCACCATTAAC +
Preference number: 1 (lower is better)
Translates to: IKFMWAVSFTHTLYS*RPVSGSHCYFGTIN
Trigger: GTTAATGGTGCCGAAATAACAATGTGAACCTGAGACTGGCCTGCATGAATACAGGGTGTGCGTGAATGAAACTGCCCACATGAACTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475377.2
3UTR-3UTR TCA 90 bp GGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTACACATCAAAGCGCCGCCTaGCGCTTCTCCTCACCGCAT +
Preference number: 2 (lower is better)
Translates to: GHDGTITMAGNEFNKNFTHQSAA*RFSSPH
Trigger: ATGCGGTGAGGAGAAGCGTCAGGCGGCGCTTTGATG...TGTAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475377.2
3UTR-3UTR GCA 90 bp TTATGGGAATGTGCCCGCAGGTGGCAGTTTAATCTTTCTGTAAATAGGTACACTCAGTTGCATCCTGTTTaGACTTTGCCAGGGCCTGGT +
Preference number: 2 (lower is better)
Translates to: LWECARRWQFNLSVNRYTQLHPV*TLPGPG
Trigger: ACCAGGCCCTGGCAAAGTGCAAACAGGATGCAACTG...AGTGTACCTATTTACAGAAAGATTAAACTGCCACCTGCGGGCACATTCCCATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
3UTR-3UTR GCA 90 bp CATCCTGTTTGCACTTTGCCAGGGCCTGGTTATAGACAAAAGGAGTTTCATCATCACACCCTGTATTCATaGAGGCCAGTCTCAGGTTCA +
Preference number: 2 (lower is better)
Translates to: HPVCTLPGPGYRQKEFHHHTLYS*RPVSGS
Trigger: TGAACCTGAGACTGGCCTGCATGAATACAGGGTGTG...ATGATGAAACTCCTTTTGTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475377.2
3UTR CAA 90 bp AAATTCCTTCGAAGACATCTCAGCAAAGGACCCACAGCAGATGCATaGATGTTATTTACAACATCAGGAAACCAGGTGGGCCATGATGGG +
Preference number: 2 (lower is better)
Translates to: KFLRRHLSKGPTADA*MLFTTSGNQVGHDG
Trigger: CCCATCATGGCCCACCTGGTTTCCTGATGTTGTAAATAACATCAATGCATCTGCTGTGGGTCCTTTGCTGAGATGTCTTCGAAGGAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
3UTR-3UTR CCA 90 bp AGCTTCAGTCCAGTTTTTGACTTTGGAATGGATCAAGTGCCCTGCCAGAGAGGACACATAAAGTTCATGTaGGCAGTTTCATTCACGCAC +
Preference number: 2 (lower is better)
Translates to: SFSPVFDFGMDQVPCQRGHIKFM*AVSFTH
Trigger: GTGCGTGAATGAAACTGCCCACATGAACTTTATGTG...TCCTCTCTGGCAGGGCACTTGATCCATTCCAAAGTCAAAAACTGGACTGAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
3UTR-3UTR TCA 90 bp GCAAATAAGTCTTATACACTATATCCCCACATTCATACTAGTGAATGCCTCTCAAAACCAGGTGGGCCATaGTGGGACAATCACAATGGC +
Preference number: 2 (lower is better)
Translates to: ANKSYTLYPHIHTSECLSKPGGP*WDNHNG
Trigger: GCCATTGTGATTGTCCCATCATGGCCCACCTGGTTT...TGAGAGGCATTCACTAGTATGAATGTGGGGATATAGTGTATAAGACTTATTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
3UTR-3UTR TCA 90 bp TTATGGGAATGTGCCCGCAGGTGGCAGTTTAATCTTTCTGTAAATAGGTACACTAAACAAAGGATTGAGTaGCCTTTGTGCCACTGCAGT +
Preference number: 2 (lower is better)
Translates to: LWECARRWQFNLSVNRYTKQRIE*PLCHCS
Trigger: ACTGCAGTGGCACAAAGGTCACTCAATCCTTTGTTT...AGTGTACCTATTTACAGAAAGATTAAACTGCCACCTGCGGGCACATTCCCATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
3UTR-3UTR GCA 90 bp AGCTTCAGTCCAGTTTTTGACTTTGGAATGGATCAAGTGCCCTGCCAGAGAGGAAGATGTAACCTTGAATaGTTGTTGATAGAGCTAGTA +
Preference number: 2 (lower is better)
Translates to: SFSPVFDFGMDQVPCQRGRCNLE*LLIELV
Trigger: TACTAGCTCTATCAACAAGCATTCAAGGTTACATCT...TCCTCTCTGGCAGGGCACTTGATCCATTCCAAAGTCAAAAACTGGACTGAAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
3UTR-3UTR GCA 90 bp TTATGGGAATGTGCCCGCAGGTGGCAGTTTAATCTTTCTGTAAATAGGTACACTATTCATACTAGTGAATaGCTCTCACAGAGCATCGTT +
Preference number: 2 (lower is better)
Translates to: LWECARRWQFNLSVNRYTIHTSE*LSQSIV
Trigger: AACGATGCTCTGTGAGAGGCATTCACTAGTATGAAT...AGTGTACCTATTTACAGAAAGATTAAACTGCCACCTGCGGGCACATTCCCATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
3UTR-3UTR CCA 90 bp GAATGCTTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCCACATAAAGTTCATGTaGGCAGTTTCATTCACGCAC +
Preference number: 2 (lower is better)
Translates to: ECLLIELVNFLARHQFLFHIKFM*AVSFTH
Trigger: GTGCGTGAATGAAACTGCCCACATGAACTTTATGTG...GAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAAGCATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
3UTR-3UTR TCA 90 bp TTATGGGAATGTGCCCGCAGGTGGCAGTTTAATCTTTCTGTAAATAGGTACACTAATCGAAGTGAATGTTaGGTCCACAGAAAGACAAAA +
Preference number: 2 (lower is better)
Translates to: LWECARRWQFNLSVNRYTNRSEC*VHRKTK
Trigger: TTTTGTCTTTCTGTGGACTCAACATTCACTTCGATT...AGTGTACCTATTTACAGAAAGATTAAACTGCCACCTGCGGGCACATTCCCATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
3UTR-3UTR GCA 90 bp CAGTGGCTTAGTGGGCCATCTAGTCCCATTACGTATTATTTAAGCTTAATACCAATTCATACTAGTGAATaGCTCTCACAGAGCATCGTT +
Preference number: 2 (lower is better)
Translates to: QWLSGPSSPITYYLSLIPIHTSE*LSQSIV
Trigger: AACGATGCTCTGTGAGAGGCATTCACTAGTATGAAT...TGGTATTAAGCTTAAATAATACGTAATGGGACTAGATGGCCCACTAAGCCACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
3UTR-3UTR CCA 90 bp CAGTGGCTTAGTGGGCCATCTAGTCCCATTACGTATTATTTAAGCTTAATACCAATCGGCTCGTCTGTATaGTTGGTTTCTAAGATCTTT +
Preference number: 2 (lower is better)
Translates to: QWLSGPSSPITYYLSLIPIGSSV*LVSKIF
Trigger: AAAGATCTTAGAAACCAACCATACAGACGAGCCGAT...TGGTATTAAGCTTAAATAATACGTAATGGGACTAGATGGCCCACTAAGCCACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475377.2
3UTR-3UTR CCA 90 bp GAATGCTTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCGCTCGTCTGTATGGTTaGTTTCTAAGATCTTTTAAG +
Preference number: 2 (lower is better)
Translates to: ECLLIELVNFLARHQFLFARLYG*FLRSFK
Trigger: CTTAAAAGATCTTAGAAACCAACCATACAGACGAGC...GAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAAGCATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475377.2
3UTR-3UTR TCA 90 bp TTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCTCAGAAAGGAGTTTCATCATGTaGCTTTCCTTCTTCCAAATT +
Preference number: 2 (lower is better)
Translates to: LLIELVNFLARHQFLFSERSFIM*LSFFQI
Trigger: AATTTGGAAGAAGGAAAGTCACATGATGAAACTCCT...TTCTGAGAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
3UTR CAA 90 bp AGAATGTATATTATGAAAAGTACAAATTTAGCTTCAGTCCAGTTTTaGACTTTGGAATGGATCAAGTGCCCTGCCAGAGAGGAAGGAAAA +
Preference number: 2 (lower is better)
Translates to: RMYIMKSTNLASVQF*TLEWIKCPAREEGK
Trigger: TTTTCCTTCCTCTCTGGCAGGGCACTTGATCCATTCCAAAGTCAAAAACTGGACTGAAGCTAAATTTGTACTTTTCATAATATACATTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
3UTR-3UTR TCA 90 bp GAAAACAGCTGCTTTGTAGTGGAAGTCCAACTTGGTCAAATTGCTATTTTTAATCCACAGCAGATGCATTaGTGTTATTTACAACATCAG +
Preference number: 2 (lower is better)
Translates to: ENSCFVVEVQLGQIAIFNPQQMH*CYLQHQ
Trigger: CTGATGTTGTAAATAACATCAATGCATCTGCTGTGG...ATTAAAAATAGCAATTTGACCAAGTTGGACTTCCACTACAAAGCAGCTGTTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
3UTR-3UTR TCA 90 bp AATAAGTCTTATACACTATATCCCCACATTCATACTAGTGAATGCCTCTCACAGAGGAGTTTCATCATGTaGCTTTCCTTCTTCCAAATT +
Preference number: 2 (lower is better)
Translates to: NKSYTLYPHIHTSECLSQRSFIM*LSFFQI
Trigger: AATTTGGAAGAAGGAAAGTCACATGATGAAACTCCT...CTGTGAGAGGCATTCACTAGTATGAATGTGGGGATATAGTGTATAAGACTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
3UTR-3UTR GCA 90 bp GAAAACAGCTGCTTTGTAGTGGAAGTCCAACTTGGTCAAATTGCTATTTTTAATAGATGTAACCTTGAATaGTTGTTGATAGAGCTAGTA +
Preference number: 2 (lower is better)
Translates to: ENSCFVVEVQLGQIAIFNRCNLE*LLIELV
Trigger: TACTAGCTCTATCAACAAGCATTCAAGGTTACATCT...ATTAAAAATAGCAATTTGACCAAGTTGGACTTCCACTACAAAGCAGCTGTTTTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
3UTR-3UTR CAA 90 bp AGCTTCAGTCCAGTTTTTGACTTTGGAATGGATCAAGTGCCCTGCCAGAGAGGAGCAGTTGCATCCTGTTaGCACTTTGCCAGGGCCTGG +
Preference number: 3 (lower is better)
Translates to: SFSPVFDFGMDQVPCQRGAVASC*HFARAW
Trigger: CCAGGCCCTGGCAAAGTGCAAACAGGATGCAACTGC...TCCTCTCTGGCAGGGCACTTGATCCATTCCAAAGTCAAAAACTGGACTGAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
3UTR TCA 72 bp ATTGTTATTTCGGCACCATTAACAGAACGCAAGTTCTaGTCATCAAAGCGCCGCCTGACGCTTCTCCTCACC +
Preference number: 3 (lower is better)
Translates to: IVISAPLTERKF*SSKRRLTLLLT
Trigger: GGTGAGGAGAAGCGTCAGGCGGCGCTTTGATGATCAGAACTTGCGTTCTGTTAATGGTGCCGAAATAACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475377.2
3UTR GCA 72 bp CCTTTGTGCCACTGCAGTTGCATCCTGTTTGCACTTTaGCAGGGCCTGGTTATAGACAAAAGGAGTTTCATC +
Preference number: 3 (lower is better)
Translates to: PLCHCSCILFAL*QGLVIDKRSFI
Trigger: GATGAAACTCCTTTTGTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATGCAACTGCAGTGGCACAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
3UTR GCA 72 bp ATGTGGGCAGTTTCATTCACGCACACCCTGTATTCATaGAGGCCAGTCTCAGGTTCACATTGTTATTTCGGC +
Preference number: 3 (lower is better)
Translates to: MWAVSFTHTLYS*RPVSGSHCYFG
Trigger: GCCGAAATAACAATGTGAACCTGAGACTGGCCTGCATGAATACAGGGTGTGCGTGAATGAAACTGCCCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475377.2
3UTR-3UTR CAA 90 bp CAGTGGCTTAGTGGGCCATCTAGTCCCATTACGTATTATTTAAGCTTAATACCACATCCTGTTTGCACTTaGCCAGGGCCTGGTTATAGA +
Preference number: 3 (lower is better)
Translates to: QWLSGPSSPITYYLSLIPHPVCT*PGPGYR
Trigger: TCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATG...TGGTATTAAGCTTAAATAATACGTAATGGGACTAGATGGCCCACTAAGCCACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
3UTR-3UTR CAA 90 bp TTATGGGAATGTGCCCGCAGGTGGCAGTTTAATCTTTCTGTAAATAGGTACACTTTTGTGCCACTGCAGTaGCATCCTGTTTGCACTTTG +
Preference number: 3 (lower is better)
Translates to: LWECARRWQFNLSVNRYTFVPLQ*HPVCTL
Trigger: CAAAGTGCAAACAGGATGCAACTGCAGTGGCACAAA...AGTGTACCTATTTACAGAAAGATTAAACTGCCACCTGCGGGCACATTCCCATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
3UTR-3UTR CAA 90 bp TTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCTCAGAACATCCTGTTTGCACTTaGCCAGGGCCTGGTTATAGA +
Preference number: 3 (lower is better)
Translates to: LLIELVNFLARHQFLFSEHPVCT*PGPGYR
Trigger: TCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATG...TTCTGAGAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
3UTR-3UTR CAA 90 bp AGCTTCAGTCCAGTTTTTGACTTTGGAATGGATCAAGTGCCCTGCCAGAGAGGATGTAACCTTGAATGCTaGTTGATAGAGCTAGTAAAC +
Preference number: 3 (lower is better)
Translates to: SFSPVFDFGMDQVPCQRGCNLEC*LIELVN
Trigger: GTTTACTAGCTCTATCAACAAGCATTCAAGGTTACA...TCCTCTCTGGCAGGGCACTTGATCCATTCCAAAGTCAAAAACTGGACTGAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
3UTR-3UTR CAA 90 bp TGGGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTATCCATTTTTAGGCACTaGTTAACAAGGGTTGAAAGG +
Preference number: 3 (lower is better)
Translates to: WAMMGQSQWQVMSLIRTLSIFRH*LTRVER
Trigger: CCTTTCAACCCTTGTTAACAAGTGCCTAAAAATGGA...TAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
3UTR-3UTR CAA 90 bp AATAAGTCTTATACACTATATCCCCACATTCATACTAGTGAATGCCTCTCACAGTCCATTTTTAGGCACTaGTTAACAAGGGTTGAAAGG +
Preference number: 3 (lower is better)
Translates to: NKSYTLYPHIHTSECLSQSIFRH*LTRVER
Trigger: CCTTTCAACCCTTGTTAACAAGTGCCTAAAAATGGA...CTGTGAGAGGCATTCACTAGTATGAATGTGGGGATATAGTGTATAAGACTTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
3UTR-3UTR CAA 90 bp GAAAACAGCTGCTTTGTAGTGGAAGTCCAACTTGGTCAAATTGCTATTTTTAATGCTTCAGTCCAGTTTTaGACTTTGGAATGGATCAAG +
Preference number: 3 (lower is better)
Translates to: ENSCFVVEVQLGQIAIFNASVQF*TLEWIK
Trigger: CTTGATCCATTCCAAAGTCAAAAACTGGACTGAAGC...ATTAAAAATAGCAATTTGACCAAGTTGGACTTCCACTACAAAGCAGCTGTTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp AGCTTCAGTCCAGTTTTTGACTTTGGAATGGATCAAGTGCCCTGCCAGAGAGGATGGCACACCGCCCCCTaGCAGAGATCGCGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: SFSPVFDFGMDQVPCQRGWHTAP*QRSRPP
Trigger: CGGGGGCCGCGATCTCTGGCAGGGGGCGGTGTGCCA...TCCTCTCTGGCAGGGCACTTGATCCATTCCAAAGTCAAAAACTGGACTGAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR GCA 90 bp TGCAGTTGCATCCTGTTTGCACTTTGCCAGGGCCTGGTTATAGACAAAAGGAGTCTAGCCGGCCACGGCTaGGCCTGCCTGGCTAGCACC +
Preference number: 4 (lower is better)
Translates to: CSCILFALCQGLVIDKRSLAGHG*ACLAST
Trigger: GGTGCTAGCCAGGCAGGCGCAGCCGTGGCCGGCTAG...ACTCCTTTTGTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATGCAACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CCA 90 bp GCACATAAAGTTCATGTGGGCAGTTTCATTCACGCACACCCTGTATTCATGCAGTGCATGGTGCTCCGCTaGCACACCGCCCCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: AHKVHVGSFIHAHPVFMQCMVLR*HTAPCQ
Trigger: CTGGCAGGGGGCGGTGTGCCAGCGGAGCACCATGCA...CTGCATGAATACAGGGTGTGCGTGAATGAAACTGCCCACATGAACTTTATGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR GCA 90 bp GCACATAAAGTTCATGTGGGCAGTTTCATTCACGCACACCCTGTATTCATGCAGCGCCTATGTGCATGGTaGTCCGCTGGCACACCGCCC +
Preference number: 4 (lower is better)
Translates to: AHKVHVGSFIHAHPVFMQRLCAW*SAGTPP
Trigger: GGGCGGTGTGCCAGCGGAGCACCATGCACATAGGCG...CTGCATGAATACAGGGTGTGCGTGAATGAAACTGCCCACATGAACTTTATGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR TCA 90 bp TGCAGTTGCATCCTGTTTGCACTTTGCCAGGGCCTGGTTATAGACAAAAGGAGTACTGTTGCCCACAGGTaGGGGCAGGTTGCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: CSCILFALCQGLVIDKRSTVAHR*GQVAPS
Trigger: AGAGGGAGCAACCTGCCCTCACCTGTGGGCAACAGT...ACTCCTTTTGTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATGCAACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR GCA 90 bp TGCAGTTGCATCCTGTTTGCACTTTGCCAGGGCCTGGTTATAGACAAAAGGAGTTCCGGGCCCCTAGCGTaGGCGTCGGAAATCAGAACA +
Preference number: 4 (lower is better)
Translates to: CSCILFALCQGLVIDKRSSGPLA*ASEIRT
Trigger: TGTTCTGATTTCCGACGCGCACGCTAGGGGCCCGGA...ACTCCTTTTGTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATGCAACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR GCA 90 bp GCACATAAAGTTCATGTGGGCAGTTTCATTCACGCACACCCTGTATTCATGCAGCGAATCCATGCTCCCTaGGTTGCCCATGTCGGCGGC +
Preference number: 4 (lower is better)
Translates to: AHKVHVGSFIHAHPVFMQRIHAP*VAHVGG
Trigger: GCCGCCGACATGGGCAACGCAGGGAGCATGGATTCG...CTGCATGAATACAGGGTGTGCGTGAATGAAACTGCCCACATGAACTTTATGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CCA 90 bp GGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTACAGCGGCCCCCGGCGCGTaGTCCCTCCTACTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: GHDGTITMAGNEFNKNFTAAPGA*SLLLGL
Trigger: AAGGCCGAGTAGGAGGGACCACGCGCCGGGGGCCGC...TGTAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CCA 90 bp CATCCTGTTTGCACTTTGCCAGGGCCTGGTTATAGACAAAAGGAGTTTCATCATGGGCGCCTATGTGCATaGTGCTCCGCTGGCACACCG +
Preference number: 4 (lower is better)
Translates to: HPVCTLPGPGYRQKEFHHGRLCA*CSAGTP
Trigger: CGGTGTGCCAGCGGAGCACCATGCACATAGGCGCCC...ATGATGAAACTCCTTTTGTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR GCA 90 bp TTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCTCAGAACCATGCTCCCTGCGTTaGCCATGTCGGCGGCGCGCC +
Preference number: 4 (lower is better)
Translates to: LLIELVNFLARHQFLFSEPCSLR*PCRRRA
Trigger: GGCGCGCCGCCGACATGGGCAACGCAGGGAGCATGG...TTCTGAGAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CCA 90 bp CGAAGACATCTCAGCAAAGGACCCACAGCAGATGCATTGATGTTATTTACAACAACGGCTGCGCCTGCCTaGCTAGCACCTGGAGCAGAC +
Preference number: 4 (lower is better)
Translates to: RRHLSKGPTADALMLFTTTAAPA*LAPGAD
Trigger: GTCTGCTCCAGGTGCTAGCCAGGCAGGCGCAGCCGT...TGTTGTAAATAACATCAATGCATCTGCTGTGGGTCCTTTGCTGAGATGTCTTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR GCA 90 bp CAGTGGCTTAGTGGGCCATCTAGTCCCATTACGTATTATTTAAGCTTAATACCACGCTGGGCGCCTATGTaGATGGTGCTCCGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: QWLSGPSSPITYYLSLIPRWAPM*MVLRWH
Trigger: GTGCCAGCGGAGCACCATGCACATAGGCGCCCAGCG...TGGTATTAAGCTTAAATAATACGTAATGGGACTAGATGGCCCACTAAGCCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR GCA 90 bp CATCCTGTTTGCACTTTGCCAGGGCCTGGTTATAGACAAAAGGAGTTTCATCATAGCGGGAGACACTGTTaGCCACAGGTGAGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: HPVCTLPGPGYRQKEFHHSGRHC*PQVRAG
Trigger: ACCTGCCCTCACCTGTGGGCAACAGTGTCTCCCGCT...ATGATGAAACTCCTTTTGTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR TCA 90 bp GCACATAAAGTTCATGTGGGCAGTTTCATTCACGCACACCCTGTATTCATGCAGCCTACTCCAGGGCTTTaGTTTGTCCACCGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: AHKVHVGSFIHAHPVFMQPTPGL*FVHRAL
Trigger: GAGAGCTCGGTGGACAAATCAAAGCCCTGGAGTAGG...CTGCATGAATACAGGGTGTGCGTGAATGAAACTGCCCACATGAACTTTATGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR TCA 90 bp CGAAGACATCTCAGCAAAGGACCCACAGCAGATGCATTGATGTTATTTACAACACATCAAAGCGCCGCCTaGCGCTTCTCCTCACCGCAT +
Preference number: 4 (lower is better)
Translates to: RRHLSKGPTADALMLFTTHQSAA*RFSSPH
Trigger: ATGCGGTGAGGAGAAGCGTCAGGCGGCGCTTTGATG...TGTTGTAAATAACATCAATGCATCTGCTGTGGGTCCTTTGCTGAGATGTCTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR TCA 90 bp AGCTTCAGTCCAGTTTTTGACTTTGGAATGGATCAAGTGCCCTGCCAGAGAGGAACAGAACGCAAGTTCTaGTCATCAAAGCGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: SFSPVFDFGMDQVPCQRGTERKF*SSKRRL
Trigger: CAGGCGGCGCTTTGATGATCAGAACTTGCGTTCTGT...TCCTCTCTGGCAGGGCACTTGATCCATTCCAAAGTCAAAAACTGGACTGAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CCA 90 bp AGCTTCAGTCCAGTTTTTGACTTTGGAATGGATCAAGTGCCCTGCCAGAGAGGAACTGCCGCAGTAACCTaGCTTTGTCAGGAGGTAGGT +
Preference number: 4 (lower is better)
Translates to: SFSPVFDFGMDQVPCQRGTAAVT*LCQEVG
Trigger: ACCTACCTCCTGACAAAGCCAGGTTACTGCGGCAGT...TCCTCTCTGGCAGGGCACTTGATCCATTCCAAAGTCAAAAACTGGACTGAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CCA 90 bp TGCAGTTGCATCCTGTTTGCACTTTGCCAGGGCCTGGTTATAGACAAAAGGAGTCCACAACTGGCAGTATaGCGATATCCCCATCCCCTT +
Preference number: 4 (lower is better)
Translates to: CSCILFALCQGLVIDKRSPQLAV*RYPHPL
Trigger: AAGGGGATGGGGATATCGCCATACTGCCAGTTGTGG...ACTCCTTTTGTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATGCAACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CCA 90 bp AGCTTCAGTCCAGTTTTTGACTTTGGAATGGATCAAGTGCCCTGCCAGAGAGGACCACTTCTGACCCCATaGACAATGTGCCAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: SFSPVFDFGMDQVPCQRGPLLTP*TMCQKP
Trigger: TGGCTTCTGGCACATTGTCCATGGGGTCAGAAGTGG...TCCTCTCTGGCAGGGCACTTGATCCATTCCAAAGTCAAAAACTGGACTGAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR TCA 90 bp GCAAATAAGTCTTATACACTATATCCCCACATTCATACTAGTGAATGCCTCTCAAGGGGGCAAGGGTCCTaGGGAAGCGGCCCCCATTGT +
Preference number: 4 (lower is better)
Translates to: ANKSYTLYPHIHTSECLSRGQGS*GSGPHC
Trigger: ACAATGGGGGCCGCTTCCTCAGGACCCTTGCCCCCT...TGAGAGGCATTCACTAGTATGAATGTGGGGATATAGTGTATAAGACTTATTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR GCA 90 bp GAATGCTTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCCAGGTGAGGGCAGGTTaGTCCCTCTGTGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: ECLLIELVNFLARHQFLFQVRAG*SLCAGP
Trigger: AGGACCTGCACAGAGGGAGCAACCTGCCCTCACCTG...GAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAAGCATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR GCA 90 bp TGCAGTTGCATCCTGTTTGCACTTTGCCAGGGCCTGGTTATAGACAAAAGGAGTATCTTGGCATCATCCTaGAGCTTCTTCAGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: CSCILFALCQGLVIDKRSILASS*SFFSFP
Trigger: GGGGAAGCTGAAGAAGCTGCAGGATGATGCCAAGAT...ACTCCTTTTGTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATGCAACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CCA 90 bp AATAAGTCTTATACACTATATCCCCACATTCATACTAGTGAATGCCTCTCACAGCTCGGGAGGGGTAGTTaGGGCGCTGGGCGCCTATGT +
Preference number: 4 (lower is better)
Translates to: NKSYTLYPHIHTSECLSQLGRGS*GAGRLC
Trigger: ACATAGGCGCCCAGCGCCCCAACTACCCCTCCCGAG...CTGTGAGAGGCATTCACTAGTATGAATGTGGGGATATAGTGTATAAGACTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CCA 90 bp GCACATAAAGTTCATGTGGGCAGTTTCATTCACGCACACCCTGTATTCATGCAGAAGTCCATTCCCCTCTaGAGCTCCTTGACATCCAGC +
Preference number: 4 (lower is better)
Translates to: AHKVHVGSFIHAHPVFMQKSIPL*SSLTSS
Trigger: GCTGGATGTCAAGGAGCTCCAGAGGGGAATGGACTT...CTGCATGAATACAGGGTGTGCGTGAATGAAACTGCCCACATGAACTTTATGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CCA 90 bp AGCTTCAGTCCAGTTTTTGACTTTGGAATGGATCAAGTGCCCTGCCAGAGAGGACATCCTGTGCGATCTTaGCATCATCCTGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SFSPVFDFGMDQVPCQRGHPVRS*HHPAAS
Trigger: AGAAGCTGCAGGATGATGCCAAGATCGCACAGGATG...TCCTCTCTGGCAGGGCACTTGATCCATTCCAAAGTCAAAAACTGGACTGAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR TCA 90 bp TTATGGGAATGTGCCCGCAGGTGGCAGTTTAATCTTTCTGTAAATAGGTACACTACCTGCTACCACTTCTaGCCCCATGGACAATGTGCC +
Preference number: 4 (lower is better)
Translates to: LWECARRWQFNLSVNRYTTCYHF*PHGQCA
Trigger: GGCACATTGTCCATGGGGTCAGAAGTGGTAGCAGGT...AGTGTACCTATTTACAGAAAGATTAAACTGCCACCTGCGGGCACATTCCCATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR TCA 90 bp TGCAGTTGCATCCTGTTTGCACTTTGCCAGGGCCTGGTTATAGACAAAAGGAGTCTGCTAATCCTGAGTTaGAAACCACTGTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: CSCILFALCQGLVIDKRSLLILS*KPLWVK
Trigger: CTTCACCCACAGTGGTTTTCAACTCAGGATTAGCAG...ACTCCTTTTGTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATGCAACTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR TCA 90 bp CATCCTGTTTGCACTTTGCCAGGGCCTGGTTATAGACAAAAGGAGTTTCATCATAAACCAGGTGGGCCATaGTGGGACAATCACAATGGC +
Preference number: 4 (lower is better)
Translates to: HPVCTLPGPGYRQKEFHHKPGGP*WDNHNG
Trigger: GCCATTGTGATTGTCCCATCATGGCCCACCTGGTTT...ATGATGAAACTCCTTTTGTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp TTATGGGAATGTGCCCGCAGGTGGCAGTTTAATCTTTCTGTAAATAGGTACACTCTGAAATCGGTCTGCTaGGAATCCATGCTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: LWECARRWQFNLSVNRYTLKSVC*ESMLPA
Trigger: CGCAGGGAGCATGGATTCGCAGCAGACCGATTTCAG...AGTGTACCTATTTACAGAAAGATTAAACTGCCACCTGCGGGCACATTCCCATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR GCA 90 bp CATCCTGTTTGCACTTTGCCAGGGCCTGGTTATAGACAAAAGGAGTTTCATCATACCCCATGGACAATGTaGCAGAAGCCACAACTGGCA +
Preference number: 4 (lower is better)
Translates to: HPVCTLPGPGYRQKEFHHTPWTM*QKPQLA
Trigger: TGCCAGTTGTGGCTTCTGGCACATTGTCCATGGGGT...ATGATGAAACTCCTTTTGTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR GCA 90 bp TTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCTCAGAATGGTACAGTCTCAGCTaGAGGGCCTGGGAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LLIELVNFLARHQFLFSEWYSLS*RAWERR
Trigger: CCTCCTCTCCCAGGCCCTGCAGCTGAGACTGTACCA...TTCTGAGAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp TGGGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTATGGTACAGTCTCAGCTaGAGGGCCTGGGAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: WAMMGQSQWQVMSLIRTLWYSLS*RAWERR
Trigger: CCTCCTCTCCCAGGCCCTGCAGCTGAGACTGTACCA...TAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp ATTCACGCACACCCTGTATTCATGCAGGCCAGTCTCAGGTTCACATTGTTATTTCAGTTGCATCCTGTTTaGACTTTGCCAGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: IHAHPVFMQASLRFTLLFQLHPV*TLPGPG
Trigger: ACCAGGCCCTGGCAAAGTGCAAACAGGATGCAACTG...AAATAACAATGTGAACCTGAGACTGGCCTGCATGAATACAGGGTGTGCGTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475377.2
CDS-3UTR GCA 90 bp GCACATAAAGTTCATGTGGGCAGTTTCATTCACGCACACCCTGTATTCATGCAGTTGGAATGGATCAAGTaGCCTGCCAGAGAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: AHKVHVGSFIHAHPVFMQLEWIK*PAREEG
Trigger: TCCTTCCTCTCTGGCAGGGCACTTGATCCATTCCAA...CTGCATGAATACAGGGTGTGCGTGAATGAAACTGCCCACATGAACTTTATGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CCA 90 bp AGCTTCAGTCCAGTTTTTGACTTTGGAATGGATCAAGTGCCCTGCCAGAGAGGAATGAGAAGGAGACTTTaGATCCTGCTGCTCCATCAG +
Preference number: 4 (lower is better)
Translates to: SFSPVFDFGMDQVPCQRGMRRRL*ILLLHQ
Trigger: CTGATGGAGCAGCAGGATCCAAAGTCTCCTTCTCAT...TCCTCTCTGGCAGGGCACTTGATCCATTCCAAAGTCAAAAACTGGACTGAAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR TCA 90 bp AGCTTCAGTCCAGTTTTTGACTTTGGAATGGATCAAGTGCCCTGCCAGAGAGGAGAACCGATCTTCATCTaGCAAGTTTTCCAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: SFSPVFDFGMDQVPCQRGEPIFI*QVFQRL
Trigger: AAGCCTCTGGAAAACTTGTCAGATGAAGATCGGTTC...TCCTCTCTGGCAGGGCACTTGATCCATTCCAAAGTCAAAAACTGGACTGAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp ATTCACGCACACCCTGTATTCATGCAGGCCAGTCTCAGGTTCACATTGTTATTTGACTTTGGATCCTGCTaGTCCATCAGAGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: IHAHPVFMQASLRFTLLFDFGSC*SIRASC
Trigger: GCAAGAAGCTCTGATGGAGCAGCAGGATCCAAAGTC...AAATAACAATGTGAACCTGAGACTGGCCTGCATGAATACAGGGTGTGCGTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475377.2
CDS-3UTR GCA 90 bp GCACATAAAGTTCATGTGGGCAGTTTCATTCACGCACACCCTGTATTCATGCAGTTGTGCCACTGCAGTTaGATCCTGTTTGCACTTTGC +
Preference number: 4 (lower is better)
Translates to: AHKVHVGSFIHAHPVFMQLCHCS*ILFALC
Trigger: GCAAAGTGCAAACAGGATGCAACTGCAGTGGCACAA...CTGCATGAATACAGGGTGTGCGTGAATGAAACTGCCCACATGAACTTTATGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CCA 90 bp CGAAGACATCTCAGCAAAGGACCCACAGCAGATGCATTGATGTTATTTACAACAAAGTCCATTCCCCTCTaGAGCTCCTTGACATCCAGC +
Preference number: 4 (lower is better)
Translates to: RRHLSKGPTADALMLFTTKSIPL*SSLTSS
Trigger: GCTGGATGTCAAGGAGCTCCAGAGGGGAATGGACTT...TGTTGTAAATAACATCAATGCATCTGCTGTGGGTCCTTTGCTGAGATGTCTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
3UTR CAA 72 bp CGAAGACATCTCAGCAAAGGACCCACAGCAGATGCATaGATGTTATTTACAACATCAGGAAACCAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: RRHLSKGPTADA*MLFTTSGNQVG
Trigger: GCCCACCTGGTTTCCTGATGTTGTAAATAACATCAATGCATCTGCTGTGGGTCCTTTGCTGAGATGTCTTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
3UTR CAA 72 bp ACCTTTGTGCCACTGCAGTTGCATCCTGTTTGCACTTaGCCAGGGCCTGGTTATAGACAAAAGGAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: TFVPLQLHPVCT*PGPGYRQKEFH
Trigger: ATGAAACTCCTTTTGTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATGCAACTGCAGTGGCACAAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR TCA 90 bp TTATGGGAATGTGCCCGCAGGTGGCAGTTTAATCTTTCTGTAAATAGGTACACTACTGTGCCATTGATCTaGTTGGGCTTCAGAGCAACC +
Preference number: 4 (lower is better)
Translates to: LWECARRWQFNLSVNRYTTVPLI*LGFRAT
Trigger: GGTTGCTCTGAAGCCCAATCAGATCAATGGCACAGT...AGTGTACCTATTTACAGAAAGATTAAACTGCCACCTGCGGGCACATTCCCATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp TTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCTCAGAAGCCCTGAAATCGGTCTaGTGCGAATCCATGCTCCCT +
Preference number: 4 (lower is better)
Translates to: LLIELVNFLARHQFLFSEALKSV*CESMLP
Trigger: AGGGAGCATGGATTCGCAGCAGACCGATTTCAGGGC...TTCTGAGAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR GCA 90 bp GAATGCTTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCTTCAAAGGCACGTTGTaGGCCCTGAAATCGGTCTGC +
Preference number: 4 (lower is better)
Translates to: ECLLIELVNFLARHQFLFFKGTL*ALKSVC
Trigger: GCAGACCGATTTCAGGGCGCACAACGTGCCTTTGAA...GAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAAGCATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR GCA 90 bp TGCAGTTGCATCCTGTTTGCACTTTGCCAGGGCCTGGTTATAGACAAAAGGAGTTTCTCATTATCATACTaGCGCAGTAACCTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: CSCILFALCQGLVIDKRSFSLSY*RSNLAL
Trigger: CAAAGCCAGGTTACTGCGGCAGTATGATAATGAGAA...ACTCCTTTTGTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATGCAACTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR GCA 90 bp CATCCTGTTTGCACTTTGCCAGGGCCTGGTTATAGACAAAAGGAGTTTCATCATATCAAAGGCATCCTGTaGGATCTTGGCATCATCCTG +
Preference number: 4 (lower is better)
Translates to: HPVCTLPGPGYRQKEFHHIKGIL*DLGIIL
Trigger: CAGGATGATGCCAAGATCGCACAGGATGCCTTTGAT...ATGATGAAACTCCTTTTGTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp CGAAGACATCTCAGCAAAGGACCCACAGCAGATGCATTGATGTTATTTACAACAGGAGACTTTGGATCCTaGTGCTCCATCAGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: RRHLSKGPTADALMLFTTGDFGS*CSIRAS
Trigger: AGAAGCTCTGATGGAGCAGCAGGATCCAAAGTCTCC...TGTTGTAAATAACATCAATGCATCTGCTGTGGGTCCTTTGCTGAGATGTCTTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp TGCAGTTGCATCCTGTTTGCACTTTGCCAGGGCCTGGTTATAGACAAAAGGAGTAGCCTCGATACACGATaGCAAGTGTATCTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: CSCILFALCQGLVIDKRSSLDTR*QVYLLE
Trigger: TTCAAGAAGATACACTTGGCATCGTGTATCGAGGCT...ACTCCTTTTGTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATGCAACTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CCA 90 bp GGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTACAGCCAGAAGCCACAACTaGCAGTATGGCGATATCCCC +
Preference number: 4 (lower is better)
Translates to: GHDGTITMAGNEFNKNFTARSHN*QYGDIP
Trigger: GGGGATATCGCCATACTGCCAGTTGTGGCTTCTGGC...TGTAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CCA 90 bp GCAAATAAGTCTTATACACTATATCCCCACATTCATACTAGTGAATGCCTCTCAAAGCGGCCCCCATTGTaGGTCCCACAGAGTTACCTG +
Preference number: 4 (lower is better)
Translates to: ANKSYTLYPHIHTSECLSKRPPL*VPQSYL
Trigger: CAGGTAACTCTGTGGGACCCACAATGGGGGCCGCTT...TGAGAGGCATTCACTAGTATGAATGTGGGGATATAGTGTATAAGACTTATTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CCA 90 bp TGCAGTTGCATCCTGTTTGCACTTTGCCAGGGCCTGGTTATAGACAAAAGGAGTTTGAAGAAAGATCAATaGCAGGTCCTTGGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: CSCILFALCQGLVIDKRSLKKDQ*QVLGLL
Trigger: CAAAAGCCCAAGGACCTGCCATTGATCTTTCTTCAA...ACTCCTTTTGTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATGCAACTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CCA 90 bp TGCAGTTGCATCCTGTTTGCACTTTGCCAGGGCCTGGTTATAGACAAAAGGAGTACCCAGAGGCTTAGGTaGGAATTAAAGAGAAGTGTA +
Preference number: 4 (lower is better)
Translates to: CSCILFALCQGLVIDKRSTQRLR*ELKRSV
Trigger: TACACTTCTCTTTAATTCCCACCTAAGCCTCTGGGT...ACTCCTTTTGTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATGCAACTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR TCA 90 bp GAAAACAGCTGCTTTGTAGTGGAAGTCCAACTTGGTCAAATTGCTATTTTTAATGCACGTTGTGCGCCCTaGAATCGGTCTGCTGCGAAT +
Preference number: 4 (lower is better)
Translates to: ENSCFVVEVQLGQIAIFNARCAP*NRSAAN
Trigger: ATTCGCAGCAGACCGATTTCAGGGCGCACAACGTGC...ATTAAAAATAGCAATTTGACCAAGTTGGACTTCCACTACAAAGCAGCTGTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR TCA 90 bp CGAAGACATCTCAGCAAAGGACCCACAGCAGATGCATTGATGTTATTTACAACACTTGAACACGCCGTCTaGATTTCTTCCTGGTTACAG +
Preference number: 4 (lower is better)
Translates to: RRHLSKGPTADALMLFTTLEHAV*ISSWLQ
Trigger: CTGTAACCAGGAAGAAATTCAGACGGCGTGTTCAAG...TGTTGTAAATAACATCAATGCATCTGCTGTGGGTCCTTTGCTGAGATGTCTTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR TCA 90 bp GAATGCTTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCACTGTGCCATTGATCTaGTTGGGCTTCAGAGCAACC +
Preference number: 4 (lower is better)
Translates to: ECLLIELVNFLARHQFLFTVPLI*LGFRAT
Trigger: GGTTGCTCTGAAGCCCAATCAGATCAATGGCACAGT...GAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAAGCATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR TCA 90 bp GCACATAAAGTTCATGTGGGCAGTTTCATTCACGCACACCCTGTATTCATGCAGCTAGGAGTTTTTCCATaGGAGCTTGTTCCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: AHKVHVGSFIHAHPVFMQLGVFP*ELVPAF
Trigger: AAAAGCAGGAACAAGCTCTCATGGAAAAACTCCTAG...CTGCATGAATACAGGGTGTGCGTGAATGAAACTGCCCACATGAACTTTATGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR TCA 90 bp GCACATAAAGTTCATGTGGGCAGTTTCATTCACGCACACCCTGTATTCATGCAGTTGCTGCTGCCTCTTTaGTTTATGAGAAGGAGACTT +
Preference number: 4 (lower is better)
Translates to: AHKVHVGSFIHAHPVFMQLLLPL*FMRRRL
Trigger: AAGTCTCCTTCTCATAAATCAAAGAGGCAGCAGCAA...CTGCATGAATACAGGGTGTGCGTGAATGAAACTGCCCACATGAACTTTATGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR TCA 90 bp TGGGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTAACAGAACGCAAGTTCTaGTCATCAAAGCGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: WAMMGQSQWQVMSLIRTLTERKF*SSKRRL
Trigger: CAGGCGGCGCTTTGATGATCAGAACTTGCGTTCTGT...TAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR TCA 90 bp GGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTACAAAACCAGGTGGGCCATaGTGGGACAATCACAATGGC +
Preference number: 4 (lower is better)
Translates to: GHDGTITMAGNEFNKNFTKPGGP*WDNHNG
Trigger: GCCATTGTGATTGTCCCATCATGGCCCACCTGGTTT...TGTAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp GCAAATAAGTCTTATACACTATATCCCCACATTCATACTAGTGAATGCCTCTCATCTGCTGCGAATCCATaGTCCCTGCGTTGCCCATGT +
Preference number: 4 (lower is better)
Translates to: ANKSYTLYPHIHTSECLSSAANP*SLRCPC
Trigger: ACATGGGCAACGCAGGGAGCATGGATTCGCAGCAGA...TGAGAGGCATTCACTAGTATGAATGTGGGGATATAGTGTATAAGACTTATTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR GCA 90 bp GCAAATAAGTCTTATACACTATATCCCCACATTCATACTAGTGAATGCCTCTCAAGGTTGCTCCCTCTGTaGAGGTCCTCGATGGACCTA +
Preference number: 4 (lower is better)
Translates to: ANKSYTLYPHIHTSECLSRLLPL*RSSMDL
Trigger: TAGGTCCATCGAGGACCTGCACAGAGGGAGCAACCT...TGAGAGGCATTCACTAGTATGAATGTGGGGATATAGTGTATAAGACTTATTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR GCA 90 bp CATCCTGTTTGCACTTTGCCAGGGCCTGGTTATAGACAAAAGGAGTTTCATCATAGCTCCTTGTTCCTCTaGATGAGTTGCTTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: HPVCTLPGPGYRQKEFHHSSLFL*MSCFSS
Trigger: ACTGGAAAAGCAACTCATGCAGAGGAACAAGGAGCT...ATGATGAAACTCCTTTTGTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR GCA 90 bp CATCCTGTTTGCACTTTGCCAGGGCCTGGTTATAGACAAAAGGAGTTTCATCATAGCGTGTTATGGTCATaGATGGTGTACTCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: HPVCTLPGPGYRQKEFHHSVLWS*MVYSLL
Trigger: CAAGAGAGAGTACACCATGCATGACCATAACACGCT...ATGATGAAACTCCTTTTGTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp GAATGCTTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCCACACCCTGTATTCATaGAGGCCAGTCTCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: ECLLIELVNFLARHQFLFHTLYS*RPVSGS
Trigger: TGAACCTGAGACTGGCCTGCATGAATACAGGGTGTG...GAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAAGCATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp TTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCTCAGAACAGTTGCATCCTGTTTaGACTTTGCCAGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: LLIELVNFLARHQFLFSEQLHPV*TLPGPG
Trigger: ACCAGGCCCTGGCAAAGTGCAAACAGGATGCAACTG...TTCTGAGAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp CGAAGACATCTCAGCAAAGGACCCACAGCAGATGCATTGATGTTATTTACAACATTGTGCCACTGCAGTTaGATCCTGTTTGCACTTTGC +
Preference number: 4 (lower is better)
Translates to: RRHLSKGPTADALMLFTTLCHCS*ILFALC
Trigger: GCAAAGTGCAAACAGGATGCAACTGCAGTGGCACAA...TGTTGTAAATAACATCAATGCATCTGCTGTGGGTCCTTTGCTGAGATGTCTTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CCA 90 bp AATAAGTCTTATACACTATATCCCCACATTCATACTAGTGAATGCCTCTCACAGCAGTTCACCTGGCTCTaGCATCGGCAGCTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: NKSYTLYPHIHTSECLSQQFTWL*HRQLQR
Trigger: CCTTTGAAGCTGCCGATGCCAGAGCCAGGTGAACTG...CTGTGAGAGGCATTCACTAGTATGAATGTGGGGATATAGTGTATAAGACTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CCA 90 bp CATCCTGTTTGCACTTTGCCAGGGCCTGGTTATAGACAAAAGGAGTTTCATCATCCAGTTCCACAATCTTaGACATGGCTTCATTCTCTG +
Preference number: 4 (lower is better)
Translates to: HPVCTLPGPGYRQKEFHHPVPQS*TWLHSL
Trigger: CAGAGAATGAAGCCATGTCCAAGATTGTGGAACTGG...ATGATGAAACTCCTTTTGTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CCA 90 bp CATCCTGTTTGCACTTTGCCAGGGCCTGGTTATAGACAAAAGGAGTTTCATCATAAAGAAGACAGAGGGTaGTGTTGTCTTGGGGTTTTC +
Preference number: 4 (lower is better)
Translates to: HPVCTLPGPGYRQKEFHHKEDRG*CCLGVF
Trigger: GAAAACCCCAAGACAACACCACCCTCTGTCTTCTTT...ATGATGAAACTCCTTTTGTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR TCA 90 bp GGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTACACCCTCTGGAGCTCCTTaGCATCCAGCAAAACATTCT +
Preference number: 4 (lower is better)
Translates to: GHDGTITMAGNEFNKNFTPSGAP*HPAKHS
Trigger: AGAATGTTTTGCTGGATGTCAAGGAGCTCCAGAGGG...TGTAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR TCA 90 bp GCACATAAAGTTCATGTGGGCAGTTTCATTCACGCACACCCTGTATTCATGCAGCCACAGCAGATGCATTaGTGTTATTTACAACATCAG +
Preference number: 4 (lower is better)
Translates to: AHKVHVGSFIHAHPVFMQPQQMH*CYLQHQ
Trigger: CTGATGTTGTAAATAACATCAATGCATCTGCTGTGG...CTGCATGAATACAGGGTGTGCGTGAATGAAACTGCCCACATGAACTTTATGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR TCA 90 bp TGCAGTTGCATCCTGTTTGCACTTTGCCAGGGCCTGGTTATAGACAAAAGGAGTATAGGTACACTAAAGTaGAATGTGGTAGGTAACTTG +
Preference number: 4 (lower is better)
Translates to: CSCILFALCQGLVIDKRSIGTLK*NVVGNL
Trigger: CAAGTTACCTACCACATTTCACTTTAGTGTACCTAT...ACTCCTTTTGTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATGCAACTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR TCA 90 bp ATTCACGCACACCCTGTATTCATGCAGGCCAGTCTCAGGTTCACATTGTTATTTAATGGTATTCCTCAGTaGGAACAGGTTCGCAGAAAA +
Preference number: 4 (lower is better)
Translates to: IHAHPVFMQASLRFTLLFNGIPQ*EQVRRK
Trigger: TTTTCTGCGAACCTGTTCTCACTGAGGAATACCATT...AAATAACAATGTGAACCTGAGACTGGCCTGCATGAATACAGGGTGTGCGTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475377.2
CDS-3UTR GCA 90 bp CATCCTGTTTGCACTTTGCCAGGGCCTGGTTATAGACAAAAGGAGTTTCATCATTGTATTATATCGCAGTaGAGAATGTCTTCCAGAGCG +
Preference number: 4 (lower is better)
Translates to: HPVCTLPGPGYRQKEFHHCIISQ*RMSSRA
Trigger: CGCTCTGGAAGACATTCTGCACTGCGATATAATACA...ATGATGAAACTCCTTTTGTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR GCA 90 bp CATCCTGTTTGCACTTTGCCAGGGCCTGGTTATAGACAAAAGGAGTTTCATCATTTCCTCTGCATGAGTTaGTTTTCCAGTTCCACAATC +
Preference number: 4 (lower is better)
Translates to: HPVCTLPGPGYRQKEFHHFLCMS*FSSSTI
Trigger: GATTGTGGAACTGGAAAAGCAACTCATGCAGAGGAA...ATGATGAAACTCCTTTTGTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR GCA 90 bp TGCAGTTGCATCCTGTTTGCACTTTGCCAGGGCCTGGTTATAGACAAAAGGAGTCTGCTCCTCTTTTACTaGTATTCATGTAGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: CSCILFALCQGLVIDKRSLLLFY*YSCSFQ
Trigger: TTGGAAACTACATGAATAGCAGTAAAAGAGGAGCAG...ACTCCTTTTGTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATGCAACTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp TTATGGGAATGTGCCCGCAGGTGGCAGTTTAATCTTTCTGTAAATAGGTACACTAGCGTGTTATGGTCATaGATGGTGTACTCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: LWECARRWQFNLSVNRYTSVLWS*MVYSLL
Trigger: CAAGAGAGAGTACACCATGCATGACCATAACACGCT...AGTGTACCTATTTACAGAAAGATTAAACTGCCACCTGCGGGCACATTCCCATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp GGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTACAATCTTGGCATCATCCTaGAGCTTCTTCAGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: GHDGTITMAGNEFNKNFTILASS*SFFSFP
Trigger: GGGGAAGCTGAAGAAGCTGCAGGATGATGCCAAGAT...TGTAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp TTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCTCAGAAGGAGACTTTGGATCCTaGTGCTCCATCAGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LLIELVNFLARHQFLFSEGDFGS*CSIRAS
Trigger: AGAAGCTCTGATGGAGCAGCAGGATCCAAAGTCTCC...TTCTGAGAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp AGCTTCAGTCCAGTTTTTGACTTTGGAATGGATCAAGTGCCCTGCCAGAGAGGATCTGCAATTAACTCTTaGTGCTGCCTCTTTGATTTA +
Preference number: 4 (lower is better)
Translates to: SFSPVFDFGMDQVPCQRGSAINS*CCLFDL
Trigger: TAAATCAAAGAGGCAGCAGCAAGAGTTAATTGCAGA...TCCTCTCTGGCAGGGCACTTGATCCATTCCAAAGTCAAAAACTGGACTGAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp GCACATAAAGTTCATGTGGGCAGTTTCATTCACGCACACCCTGTATTCATGCAGATTCATACTAGTGAATaGCTCTCACAGAGCATCGTT +
Preference number: 4 (lower is better)
Translates to: AHKVHVGSFIHAHPVFMQIHTSE*LSQSIV
Trigger: AACGATGCTCTGTGAGAGGCATTCACTAGTATGAAT...CTGCATGAATACAGGGTGTGCGTGAATGAAACTGCCCACATGAACTTTATGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CCA 90 bp GAATGCTTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCCTTCCTGGTTACAGCTaGATCCAGATAGCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: ECLLIELVNFLARHQFLFLPGYS*IQIAFE
Trigger: CTCAAAGGCTATCTGGATCCAGCTGTAACCAGGAAG...GAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAAGCATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CCA 90 bp CATCCTGTTTGCACTTTGCCAGGGCCTGGTTATAGACAAAAGGAGTTTCATCATCACATAAAGTTCATGTaGGCAGTTTCATTCACGCAC +
Preference number: 4 (lower is better)
Translates to: HPVCTLPGPGYRQKEFHHHIKFM*AVSFTH
Trigger: GTGCGTGAATGAAACTGCCCACATGAACTTTATGTG...ATGATGAAACTCCTTTTGTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
3UTR CAA 72 bp CACTACTCTGCTAGCAGATGTAACCTTGAATGCTTGTaGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAA +
Preference number: 4 (lower is better)
Translates to: HYSASRCNLECL*IELVNFLARHQ
Trigger: TTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAAGCATTCAAGGTTACATCTGCTAGCAGAGTAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR TCA 90 bp GGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTACACTGCTAATCCTGAGTTaGAAACCACTGTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: GHDGTITMAGNEFNKNFTLLILS*KPLWVK
Trigger: CTTCACCCACAGTGGTTTTCAACTCAGGATTAGCAG...TGTAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR TCA 90 bp GAATGCTTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCGAACCGATCTTCATCTaGCAAGTTTTCCAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: ECLLIELVNFLARHQFLFEPIFI*QVFQRL
Trigger: AAGCCTCTGGAAAACTTGTCAGATGAAGATCGGTTC...GAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAAGCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR TCA 90 bp GCAAATAAGTCTTATACACTATATCCCCACATTCATACTAGTGAATGCCTCTCACCCTCTGGAGCTCCTTaGCATCCAGCAAAACATTCT +
Preference number: 4 (lower is better)
Translates to: ANKSYTLYPHIHTSECLSPSGAP*HPAKHS
Trigger: AGAATGTTTTGCTGGATGTCAAGGAGCTCCAGAGGG...TGAGAGGCATTCACTAGTATGAATGTGGGGATATAGTGTATAAGACTTATTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp CGAAGACATCTCAGCAAAGGACCCACAGCAGATGCATTGATGTTATTTACAACAGAGTCAGCATCTGAATaGTTTCAGCAAAGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: RRHLSKGPTADALMLFTTESASE*FQQSSQ
Trigger: TTGGGAACTTTGCTGAAAGCATTCAGATGCTGACTC...TGTTGTAAATAACATCAATGCATCTGCTGTGGGTCCTTTGCTGAGATGTCTTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp TTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCTCAGAAATCAAAGGCATCCTGTaGGATCTTGGCATCATCCTG +
Preference number: 4 (lower is better)
Translates to: LLIELVNFLARHQFLFSEIKGIL*DLGIIL
Trigger: CAGGATGATGCCAAGATCGCACAGGATGCCTTTGAT...TTCTGAGAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp GCAAATAAGTCTTATACACTATATCCCCACATTCATACTAGTGAATGCCTCTCAGACTTTGGATCCTGCTaGTCCATCAGAGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: ANKSYTLYPHIHTSECLSDFGSC*SIRASC
Trigger: GCAAGAAGCTCTGATGGAGCAGCAGGATCCAAAGTC...TGAGAGGCATTCACTAGTATGAATGTGGGGATATAGTGTATAAGACTTATTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp GCAAATAAGTCTTATACACTATATCCCCACATTCATACTAGTGAATGCCTCTCACACACCCTGTATTCATaGAGGCCAGTCTCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: ANKSYTLYPHIHTSECLSHTLYS*RPVSGS
Trigger: TGAACCTGAGACTGGCCTGCATGAATACAGGGTGTG...TGAGAGGCATTCACTAGTATGAATGTGGGGATATAGTGTATAAGACTTATTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp GGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTACAATCCTGTTTGCACTTTaGCAGGGCCTGGTTATAGAC +
Preference number: 4 (lower is better)
Translates to: GHDGTITMAGNEFNKNFTILFAL*QGLVID
Trigger: GTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGAT...TGTAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp TGCAGTTGCATCCTGTTTGCACTTTGCCAGGGCCTGGTTATAGACAAAAGGAGTAGATGTAACCTTGAATaGTTGTTGATAGAGCTAGTA +
Preference number: 4 (lower is better)
Translates to: CSCILFALCQGLVIDKRSRCNLE*LLIELV
Trigger: TACTAGCTCTATCAACAAGCATTCAAGGTTACATCT...ACTCCTTTTGTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATGCAACTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp GCAAATAAGTCTTATACACTATATCCCCACATTCATACTAGTGAATGCCTCTCATTGGAATGGATCAAGTaGCCTGCCAGAGAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: ANKSYTLYPHIHTSECLSLEWIK*PAREEG
Trigger: TCCTTCCTCTCTGGCAGGGCACTTGATCCATTCCAA...TGAGAGGCATTCACTAGTATGAATGTGGGGATATAGTGTATAAGACTTATTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CCA 90 bp CGAAGACATCTCAGCAAAGGACCCACAGCAGATGCATTGATGTTATTTACAACATTGAAGAAAGATCAATaGCAGGTCCTTGGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: RRHLSKGPTADALMLFTTLKKDQ*QVLGLL
Trigger: CAAAAGCCCAAGGACCTGCCATTGATCTTTCTTCAA...TGTTGTAAATAACATCAATGCATCTGCTGTGGGTCCTTTGCTGAGATGTCTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CCA 90 bp TGCAGTTGCATCCTGTTTGCACTTTGCCAGGGCCTGGTTATAGACAAAAGGAGTTTTCTTTCACCACATTaGATATATAGTGCAACAGTG +
Preference number: 4 (lower is better)
Translates to: CSCILFALCQGLVIDKRSFLSPH*IYSATV
Trigger: CACTGTTGCACTATATATCCAATGTGGTGAAAGAAA...ACTCCTTTTGTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATGCAACTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CCA 90 bp TGGGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTATGGTGTACTCTCTCTTaGTCAAGTCCATTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: WAMMGQSQWQVMSLIRTLWCTLS*SSPFPS
Trigger: AGAGGGGAATGGACTTGACCAAGAGAGAGTACACCA...TAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CCA 90 bp GAATGCTTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCTTCAGCAGCGTGTTATaGTCATGCATGGTGTACTCT +
Preference number: 4 (lower is better)
Translates to: ECLLIELVNFLARHQFLFFSSVL*SCMVYS
Trigger: AGAGTACACCATGCATGACCATAACACGCTGCTGAA...GAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAAGCATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CCA 90 bp AATAAGTCTTATACACTATATCCCCACATTCATACTAGTGAATGCCTCTCACAGCATCCTGTGCGATCTTaGCATCATCCTGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: NKSYTLYPHIHTSECLSQHPVRS*HHPAAS
Trigger: AGAAGCTGCAGGATGATGCCAAGATCGCACAGGATG...CTGTGAGAGGCATTCACTAGTATGAATGTGGGGATATAGTGTATAAGACTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CCA 90 bp TTATGGGAATGTGCCCGCAGGTGGCAGTTTAATCTTTCTGTAAATAGGTACACTAGGGTGGTGTTGTCTTaGGGTTTTCTCCAAAATACT +
Preference number: 4 (lower is better)
Translates to: LWECARRWQFNLSVNRYTRVVLS*GFLQNT
Trigger: AGTATTTTGGAGAAAACCCCAAGACAACACCACCCT...AGTGTACCTATTTACAGAAAGATTAAACTGCCACCTGCGGGCACATTCCCATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CCA 90 bp CAGTGGCTTAGTGGGCCATCTAGTCCCATTACGTATTATTTAAGCTTAATACCAAAAGAAGACAGAGGGTaGTGTTGTCTTGGGGTTTTC +
Preference number: 4 (lower is better)
Translates to: QWLSGPSSPITYYLSLIPKEDRG*CCLGVF
Trigger: GAAAACCCCAAGACAACACCACCCTCTGTCTTCTTT...TGGTATTAAGCTTAAATAATACGTAATGGGACTAGATGGCCCACTAAGCCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CCA 90 bp GGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTACAATGAGAAGGAGACTTTaGATCCTGCTGCTCCATCAG +
Preference number: 4 (lower is better)
Translates to: GHDGTITMAGNEFNKNFTMRRRL*ILLLHQ
Trigger: CTGATGGAGCAGCAGGATCCAAAGTCTCCTTCTCAT...TGTAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR TCA 90 bp GAATGCTTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCCTAGGAGTTTTTCCATaGGAGCTTGTTCCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: ECLLIELVNFLARHQFLFLGVFP*ELVPAF
Trigger: AAAAGCAGGAACAAGCTCTCATGGAAAAACTCCTAG...GAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAAGCATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR TCA 90 bp GGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTACAAAACAAAGGATTGAGTaGCCTTTGTGCCACTGCAGT +
Preference number: 4 (lower is better)
Translates to: GHDGTITMAGNEFNKNFTKQRIE*PLCHCS
Trigger: ACTGCAGTGGCACAAAGGTCACTCAATCCTTTGTTT...TGTAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR TCA 90 bp TTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCTCAGAAAAACAAAGGATTGAGTaGCCTTTGTGCCACTGCAGT +
Preference number: 4 (lower is better)
Translates to: LLIELVNFLARHQFLFSEKQRIE*PLCHCS
Trigger: ACTGCAGTGGCACAAAGGTCACTCAATCCTTTGTTT...TTCTGAGAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR TCA 90 bp TTATGGGAATGTGCCCGCAGGTGGCAGTTTAATCTTTCTGTAAATAGGTACACTCTTCAGTCCAGTTTTTaGCTTTGGAATGGATCAAGT +
Preference number: 4 (lower is better)
Translates to: LWECARRWQFNLSVNRYTLQSSF*LWNGSS
Trigger: ACTTGATCCATTCCAAAGTCAAAAACTGGACTGAAG...AGTGTACCTATTTACAGAAAGATTAAACTGCCACCTGCGGGCACATTCCCATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR TCA 90 bp CATCCTGTTTGCACTTTGCCAGGGCCTGGTTATAGACAAAAGGAGTTTCATCATAATCGAAGTGAATGTTaGGTCCACAGAAAGACAAAA +
Preference number: 4 (lower is better)
Translates to: HPVCTLPGPGYRQKEFHHNRSEC*VHRKTK
Trigger: TTTTGTCTTTCTGTGGACTCAACATTCACTTCGATT...ATGATGAAACTCCTTTTGTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR TCA 90 bp CGAAGACATCTCAGCAAAGGACCCACAGCAGATGCATTGATGTTATTTACAACACATATATGTCAGCATTaGACTTTGGAAAACAGCTGC +
Preference number: 4 (lower is better)
Translates to: RRHLSKGPTADALMLFTTHICQH*TLENSC
Trigger: GCAGCTGTTTTCCAAAGTTCAATGCTGACATATATG...TGTTGTAAATAACATCAATGCATCTGCTGTGGGTCCTTTGCTGAGATGTCTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR TCA 90 bp TGGGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTATCACAGAGAAAAGCTTaGTTGGCCCATCTGCTAATC +
Preference number: 4 (lower is better)
Translates to: WAMMGQSQWQVMSLIRTLSQRKA*LAHLLI
Trigger: GATTAGCAGATGGGCCAATCAAGCTTTTCTCTGTGA...TAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475377.2
CDS-3UTR GCA 90 bp CATCCTGTTTGCACTTTGCCAGGGCCTGGTTATAGACAAAAGGAGTTTCATCATGTGGTATCTTCTGTTTaGTTGAAGAAAGATCAATGG +
Preference number: 4 (lower is better)
Translates to: HPVCTLPGPGYRQKEFHHVVSSV*LKKDQW
Trigger: CCATTGATCTTTCTTCAAGCAAACAGAAGATACCAC...ATGATGAAACTCCTTTTGTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp TTATGGGAATGTGCCCGCAGGTGGCAGTTTAATCTTTCTGTAAATAGGTACACTATGATGGTCATCTTCTaGATGAGCCTCTCGATTTTA +
Preference number: 4 (lower is better)
Translates to: LWECARRWQFNLSVNRYTMMVIF*MSLSIL
Trigger: TAAAATCGAGAGGCTCATGCAGAAGATGACCATCAT...AGTGTACCTATTTACAGAAAGATTAAACTGCCACCTGCGGGCACATTCCCATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp GAATGCTTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCATTCTCAAGGGAGACTaGAGCAGCTTTTTCCACATA +
Preference number: 4 (lower is better)
Translates to: ECLLIELVNFLARHQFLFILKGD*SSFFHI
Trigger: TATGTGGAAAAAGCTGCTGCAGTCTCCCTTGAGAAT...GAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAAGCATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp CAGTGGCTTAGTGGGCCATCTAGTCCCATTACGTATTATTTAAGCTTAATACCATCCATCAGAGCTTCTTaGTCTAGGAGTTTTTCCATG +
Preference number: 4 (lower is better)
Translates to: QWLSGPSSPITYYLSLIPSIRAS*SRSFSM
Trigger: CATGGAAAAACTCCTAGAGCAAGAAGCTCTGATGGA...TGGTATTAAGCTTAAATAATACGTAATGGGACTAGATGGCCCACTAAGCCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp GCAAATAAGTCTTATACACTATATCCCCACATTCATACTAGTGAATGCCTCTCAATCCTGTTTGCACTTTaGCAGGGCCTGGTTATAGAC +
Preference number: 4 (lower is better)
Translates to: ANKSYTLYPHIHTSECLSILFAL*QGLVID
Trigger: GTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGAT...TGAGAGGCATTCACTAGTATGAATGTGGGGATATAGTGTATAAGACTTATTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CCA 90 bp CGAAGACATCTCAGCAAAGGACCCACAGCAGATGCATTGATGTTATTTACAACAAACCCAGTTAAACACTaGCATTCTGAACTTCGTCTT +
Preference number: 4 (lower is better)
Translates to: RRHLSKGPTADALMLFTTNPVKH*HSELRL
Trigger: AAGACGAAGTTCAGAATGCCAGTGTTTAACTGGGTT...TGTTGTAAATAACATCAATGCATCTGCTGTGGGTCCTTTGCTGAGATGTCTTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CCA 90 bp GCAAATAAGTCTTATACACTATATCCCCACATTCATACTAGTGAATGCCTCTCATGGTGTACTCTCTCTTaGTCAAGTCCATTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: ANKSYTLYPHIHTSECLSWCTLS*SSPFPS
Trigger: AGAGGGGAATGGACTTGACCAAGAGAGAGTACACCA...TGAGAGGCATTCACTAGTATGAATGTGGGGATATAGTGTATAAGACTTATTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CCA 90 bp TTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCTCAGAATTCAGCAGCGTGTTATaGTCATGCATGGTGTACTCT +
Preference number: 4 (lower is better)
Translates to: LLIELVNFLARHQFLFSEFSSVL*SCMVYS
Trigger: AGAGTACACCATGCATGACCATAACACGCTGCTGAA...TTCTGAGAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR TCA 90 bp CGAAGACATCTCAGCAAAGGACCCACAGCAGATGCATTGATGTTATTTACAACAGATCCAGATAGCCTTTaGGCTTTTGAATGTATGTAT +
Preference number: 4 (lower is better)
Translates to: RRHLSKGPTADALMLFTTDPDSL*AFECMY
Trigger: ATACATACATTCAAAAGCTCAAAGGCTATCTGGATC...TGTTGTAAATAACATCAATGCATCTGCTGTGGGTCCTTTGCTGAGATGTCTTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR TCA 90 bp TTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCTCAGAAACTTGTGTAGATTCTTaGACACGCCGTCTGAATTTC +
Preference number: 4 (lower is better)
Translates to: LLIELVNFLARHQFLFSETCVDS*TRRLNF
Trigger: GAAATTCAGACGGCGTGTTCAAGAATCTACACAAGT...TTCTGAGAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR TCA 90 bp GGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTACACCATCCCCTTTCTTCTaGATTTTAATGGTCCCTTGT +
Preference number: 4 (lower is better)
Translates to: GHDGTITMAGNEFNKNFTPSPFF*ILMVPC
Trigger: ACAAGGGACCATTAAAATTCAGAAGAAAGGGGATGG...TGTAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR TCA 90 bp GGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTACATTGCTGCTGCCTCTTTaGTTTATGAGAAGGAGACTT +
Preference number: 4 (lower is better)
Translates to: GHDGTITMAGNEFNKNFTLLLPL*FMRRRL
Trigger: AAGTCTCCTTCTCATAAATCAAAGAGGCAGCAGCAA...TGTAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR TCA 90 bp CGAAGACATCTCAGCAAAGGACCCACAGCAGATGCATTGATGTTATTTACAACAAGGAGTTTCATCATGTaGCTTTCCTTCTTCCAAATT +
Preference number: 4 (lower is better)
Translates to: RRHLSKGPTADALMLFTTRSFIM*LSFFQI
Trigger: AATTTGGAAGAAGGAAAGTCACATGATGAAACTCCT...TGTTGTAAATAACATCAATGCATCTGCTGTGGGTCCTTTGCTGAGATGTCTTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR TCA 90 bp CAGTGGCTTAGTGGGCCATCTAGTCCCATTACGTATTATTTAAGCTTAATACCACATATATGTCAGCATTaGACTTTGGAAAACAGCTGC +
Preference number: 4 (lower is better)
Translates to: QWLSGPSSPITYYLSLIPHICQH*TLENSC
Trigger: GCAGCTGTTTTCCAAAGTTCAATGCTGACATATATG...TGGTATTAAGCTTAAATAATACGTAATGGGACTAGATGGCCCACTAAGCCACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp CAGTGGCTTAGTGGGCCATCTAGTCCCATTACGTATTATTTAAGCTTAATACCAGATAAAATGATTTCATaGCCGCCTCTGACAAGACAA +
Preference number: 4 (lower is better)
Translates to: QWLSGPSSPITYYLSLIPDKMIS*PPLTRQ
Trigger: TTGTCTTGTCAGAGGCGGGCATGAAATCATTTTATC...TGGTATTAAGCTTAAATAATACGTAATGGGACTAGATGGCCCACTAAGCCACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR GCA 90 bp GGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTACAGTTACTGGACCATTTTaGACTGTTTCAGGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: GHDGTITMAGNEFNKNFTVTGPF*TVSGVS
Trigger: AGACACACCTGAAACAGTGCAAAATGGTCCAGTAAC...TGTAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR GCA 90 bp GGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTACAATTCTCAAGGGAGACTaGAGCAGCTTTTTCCACATA +
Preference number: 4 (lower is better)
Translates to: GHDGTITMAGNEFNKNFTILKGD*SSFFHI
Trigger: TATGTGGAAAAAGCTGCTGCAGTCTCCCTTGAGAAT...TGTAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp TTATGGGAATGTGCCCGCAGGTGGCAGTTTAATCTTTCTGTAAATAGGTACACTTCTGCAATTAACTCTTaGTGCTGCCTCTTTGATTTA +
Preference number: 4 (lower is better)
Translates to: LWECARRWQFNLSVNRYTSAINS*CCLFDL
Trigger: TAAATCAAAGAGGCAGCAGCAAGAGTTAATTGCAGA...AGTGTACCTATTTACAGAAAGATTAAACTGCCACCTGCGGGCACATTCCCATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp TGGGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTAAGCCTCGATACACGATaGCAAGTGTATCTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: WAMMGQSQWQVMSLIRTLSLDTR*QVYLLE
Trigger: TTCAAGAAGATACACTTGGCATCGTGTATCGAGGCT...TAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CCA 90 bp CGAAGACATCTCAGCAAAGGACCCACAGCAGATGCATTGATGTTATTTACAACACTTTCCTTAAAGTTATaGCAAGATTTTTGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: RRHLSKGPTADALMLFTTLSLKL*QDFWPC
Trigger: ACAGGGCCAAAAATCTTGCCATAACTTTAAGGAAAG...TGTTGTAAATAACATCAATGCATCTGCTGTGGGTCCTTTGCTGAGATGTCTTCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CCA 90 bp TTATGGGAATGTGCCCGCAGGTGGCAGTTTAATCTTTCTGTAAATAGGTACACTCTTTCCTTAAAGTTATaGCAAGATTTTTGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: LWECARRWQFNLSVNRYTLSLKL*QDFWPC
Trigger: ACAGGGCCAAAAATCTTGCCATAACTTTAAGGAAAG...AGTGTACCTATTTACAGAAAGATTAAACTGCCACCTGCGGGCACATTCCCATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CCA 90 bp GGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTACAAGGGTGGTGTTGTCTTaGGGTTTTCTCCAAAATACT +
Preference number: 4 (lower is better)
Translates to: GHDGTITMAGNEFNKNFTRVVLS*GFLQNT
Trigger: AGTATTTTGGAGAAAACCCCAAGACAACACCACCCT...TGTAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CCA 90 bp TTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCTCAGAATTTTTGACTTTGGAATaGATCAAGTGCCCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: LLIELVNFLARHQFLFSEFLTLE*IKCPAR
Trigger: TCTGGCAGGGCACTTGATCCATTCCAAAGTCAAAAA...TTCTGAGAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CCA 90 bp TTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCTCAGAAACCCAGAGGCTTAGGTaGGAATTAAAGAGAAGTGTA +
Preference number: 4 (lower is better)
Translates to: LLIELVNFLARHQFLFSETQRLR*ELKRSV
Trigger: TACACTTCTCTTTAATTCCCACCTAAGCCTCTGGGT...TTCTGAGAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR TCA 90 bp GCAAATAAGTCTTATACACTATATCCCCACATTCATACTAGTGAATGCCTCTCATGGCACGTAAACACATaGTACAGACATGCACATCAT +
Preference number: 4 (lower is better)
Translates to: ANKSYTLYPHIHTSECLSWHVNT*YRHAHH
Trigger: ATGATGTGCATGTCTGTATCATGTGTTTACGTGCCA...TGAGAGGCATTCACTAGTATGAATGTGGGGATATAGTGTATAAGACTTATTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR TCA 90 bp TTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCTCAGAAACTGCAGGTGAACTCTaGAATTCATATCTTCTACTG +
Preference number: 4 (lower is better)
Translates to: LLIELVNFLARHQFLFSETAGEL*NSYLLL
Trigger: CAGTAGAAGATATGAATTTCAGAGTTCACCTGCAGT...TTCTGAGAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR TCA 90 bp CAGTGGCTTAGTGGGCCATCTAGTCCCATTACGTATTATTTAAGCTTAATACCAATAGGTACACTAAAGTaGAATGTGGTAGGTAACTTG +
Preference number: 4 (lower is better)
Translates to: QWLSGPSSPITYYLSLIPIGTLK*NVVGNL
Trigger: CAAGTTACCTACCACATTTCACTTTAGTGTACCTAT...TGGTATTAAGCTTAAATAATACGTAATGGGACTAGATGGCCCACTAAGCCACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp CAGTGGCTTAGTGGGCCATCTAGTCCCATTACGTATTATTTAAGCTTAATACCAGTGAACTTGAGTATTTaGATCTTTGTAGATTTCCCG +
Preference number: 4 (lower is better)
Translates to: QWLSGPSSPITYYLSLIPVNLSI*IFVDFP
Trigger: CGGGAAATCTACAAAGATGCAAATACTCAAGTTCAC...TGGTATTAAGCTTAAATAATACGTAATGGGACTAGATGGCCCACTAAGCCACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR GCA 90 bp GCAAATAAGTCTTATACACTATATCCCCACATTCATACTAGTGAATGCCTCTCAGAGTCAGCATCTGAATaGTTTCAGCAAAGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: ANKSYTLYPHIHTSECLSESASE*FQQSSQ
Trigger: TTGGGAACTTTGCTGAAAGCATTCAGATGCTGACTC...TGAGAGGCATTCACTAGTATGAATGTGGGGATATAGTGTATAAGACTTATTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp CAGTGGCTTAGTGGGCCATCTAGTCCCATTACGTATTATTTAAGCTTAATACCACTCATTTTCCTCTTCTaGTTGCTTATATGCTTTCAC +
Preference number: 4 (lower is better)
Translates to: QWLSGPSSPITYYLSLIPLIFLF*LLICFH
Trigger: GTGAAAGCATATAAGCAAGCAGAAGAGGAAAATGAG...TGGTATTAAGCTTAAATAATACGTAATGGGACTAGATGGCCCACTAAGCCACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp CGAAGACATCTCAGCAAAGGACCCACAGCAGATGCATTGATGTTATTTACAACAAGATGTAACCTTGAATaGTTGTTGATAGAGCTAGTA +
Preference number: 4 (lower is better)
Translates to: RRHLSKGPTADALMLFTTRCNLE*LLIELV
Trigger: TACTAGCTCTATCAACAAGCATTCAAGGTTACATCT...TGTTGTAAATAACATCAATGCATCTGCTGTGGGTCCTTTGCTGAGATGTCTTCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CCA 90 bp GAATGCTTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCCTGACCCATCCAATGTaGTTAGTTCTCAAAGAAATT +
Preference number: 4 (lower is better)
Translates to: ECLLIELVNFLARHQFLFLTHPM*LVLKEI
Trigger: AATTTCTTTGAGAACTAACCACATTGGATGGGTCAG...GAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAAGCATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CCA 90 bp GAAAACAGCTGCTTTGTAGTGGAAGTCCAACTTGGTCAAATTGCTATTTTTAATCAAGGGCTTTTGTTCTaGGATTCTTGTTGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: ENSCFVVEVQLGQIAIFNQGLLF*DSCCSG
Trigger: GCCTGAACAACAAGAATCCCAGAACAAAAGCCCTTG...ATTAAAAATAGCAATTTGACCAAGTTGGACTTCCACTACAAAGCAGCTGTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CCA 90 bp CAGTGGCTTAGTGGGCCATCTAGTCCCATTACGTATTATTTAAGCTTAATACCATTATGGCAAGATTTTTaGCCCTGTTTGCTTCTAGTA +
Preference number: 4 (lower is better)
Translates to: QWLSGPSSPITYYLSLIPLWQDF*PCLLLV
Trigger: TACTAGAAGCAAACAGGGCCAAAAATCTTGCCATAA...TGGTATTAAGCTTAAATAATACGTAATGGGACTAGATGGCCCACTAAGCCACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR TCA 90 bp GCAAATAAGTCTTATACACTATATCCCCACATTCATACTAGTGAATGCCTCTCACTTCAGTCCAGTTTTTaGCTTTGGAATGGATCAAGT +
Preference number: 4 (lower is better)
Translates to: ANKSYTLYPHIHTSECLSLQSSF*LWNGSS
Trigger: ACTTGATCCATTCCAAAGTCAAAAACTGGACTGAAG...TGAGAGGCATTCACTAGTATGAATGTGGGGATATAGTGTATAAGACTTATTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp TGGGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTAGTGGTATCTTCTGTTTaGTTGAAGAAAGATCAATGG +
Preference number: 4 (lower is better)
Translates to: WAMMGQSQWQVMSLIRTLVVSSV*LKKDQW
Trigger: CCATTGATCTTTCTTCAAGCAAACAGAAGATACCAC...TAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp CAGTGGCTTAGTGGGCCATCTAGTCCCATTACGTATTATTTAAGCTTAATACCATCGATTTTACTAAACTaGATCATGAACCGATCTTCA +
Preference number: 4 (lower is better)
Translates to: QWLSGPSSPITYYLSLIPSILLN*IMNRSS
Trigger: TGAAGATCGGTTCATGATGCAGTTTAGTAAAATCGA...TGGTATTAAGCTTAAATAATACGTAATGGGACTAGATGGCCCACTAAGCCACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp GCAAATAAGTCTTATACACTATATCCCCACATTCATACTAGTGAATGCCTCTCAATGATGGTCATCTTCTaGATGAGCCTCTCGATTTTA +
Preference number: 4 (lower is better)
Translates to: ANKSYTLYPHIHTSECLSMMVIF*MSLSIL
Trigger: TAAAATCGAGAGGCTCATGCAGAAGATGACCATCAT...TGAGAGGCATTCACTAGTATGAATGTGGGGATATAGTGTATAAGACTTATTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp TTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCTCAGAACTGCTCCTCTTTTACTaGTATTCATGTAGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: LLIELVNFLARHQFLFSELLLFY*YSCSFQ
Trigger: TTGGAAACTACATGAATAGCAGTAAAAGAGGAGCAG...TTCTGAGAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp TTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCTCAGAATTCTGCTTGCTTATATaGTTTCACAAACCGGACAAA +
Preference number: 4 (lower is better)
Translates to: LLIELVNFLARHQFLFSEFCLLI*FHKPDK
Trigger: TTTGTCCGGTTTGTGAAAGCATATAAGCAAGCAGAA...TTCTGAGAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp TGGGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTACTCATTTTCCTCTTCTaGTTGCTTATATGCTTTCAC +
Preference number: 4 (lower is better)
Translates to: WAMMGQSQWQVMSLIRTLLIFLF*LLICFH
Trigger: GTGAAAGCATATAAGCAAGCAGAAGAGGAAAATGAG...TAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp GAAAACAGCTGCTTTGTAGTGGAAGTCCAACTTGGTCAAATTGCTATTTTTAATTCCATCAGAGCTTCTTaGTCTAGGAGTTTTTCCATG +
Preference number: 4 (lower is better)
Translates to: ENSCFVVEVQLGQIAIFNSIRAS*SRSFSM
Trigger: CATGGAAAAACTCCTAGAGCAAGAAGCTCTGATGGA...ATTAAAAATAGCAATTTGACCAAGTTGGACTTCCACTACAAAGCAGCTGTTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp AATAAGTCTTATACACTATATCCCCACATTCATACTAGTGAATGCCTCTCACAGACTTTGGAAAACAGCTaGTTTGTAGTGGAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: NKSYTLYPHIHTSECLSQTLENS*FVVEVQ
Trigger: TTGGACTTCCACTACAAAGCAGCTGTTTTCCAAAGT...CTGTGAGAGGCATTCACTAGTATGAATGTGGGGATATAGTGTATAAGACTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CCA 90 bp GAAAACAGCTGCTTTGTAGTGGAAGTCCAACTTGGTCAAATTGCTATTTTTAATCCACAATCTTGGACATaGCTTCATTCTCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: ENSCFVVEVQLGQIAIFNPQSWT*LHSLCL
Trigger: AAGACACAGAGAATGAAGCCATGTCCAAGATTGTGG...ATTAAAAATAGCAATTTGACCAAGTTGGACTTCCACTACAAAGCAGCTGTTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CCA 90 bp GAAAACAGCTGCTTTGTAGTGGAAGTCCAACTTGGTCAAATTGCTATTTTTAATCATAGGTGGTGTTACTaGACCATTTTGCACTGTTTC +
Preference number: 4 (lower is better)
Translates to: ENSCFVVEVQLGQIAIFNHRWCY*TILHCF
Trigger: GAAACAGTGCAAAATGGTCCAGTAACACCACCTATG...ATTAAAAATAGCAATTTGACCAAGTTGGACTTCCACTACAAAGCAGCTGTTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CCA 90 bp AATAAGTCTTATACACTATATCCCCACATTCATACTAGTGAATGCCTCTCACAGAACCCAGTTAAACACTaGCATTCTGAACTTCGTCTT +
Preference number: 4 (lower is better)
Translates to: NKSYTLYPHIHTSECLSQNPVKH*HSELRL
Trigger: AAGACGAAGTTCAGAATGCCAGTGTTTAACTGGGTT...CTGTGAGAGGCATTCACTAGTATGAATGTGGGGATATAGTGTATAAGACTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CCA 90 bp TGGGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTATTATGGCAAGATTTTTaGCCCTGTTTGCTTCTAGTA +
Preference number: 4 (lower is better)
Translates to: WAMMGQSQWQVMSLIRTLLWQDF*PCLLLV
Trigger: TACTAGAAGCAAACAGGGCCAAAAATCTTGCCATAA...TAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CCA 90 bp GAAAACAGCTGCTTTGTAGTGGAAGTCCAACTTGGTCAAATTGCTATTTTTAATATCGGCTCGTCTGTATaGTTGGTTTCTAAGATCTGT +
Preference number: 4 (lower is better)
Translates to: ENSCFVVEVQLGQIAIFNIGSSV*LVSKIC
Trigger: ACAGATCTTAGAAACCAACCATACAGACGAGCCGAT...ATTAAAAATAGCAATTTGACCAAGTTGGACTTCCACTACAAAGCAGCTGTTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CCA 90 bp GAAAACAGCTGCTTTGTAGTGGAAGTCCAACTTGGTCAAATTGCTATTTTTAATTTTTTGACTTTGGAATaGATCAAGTGCCCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: ENSCFVVEVQLGQIAIFNFLTLE*IKCPAR
Trigger: TCTGGCAGGGCACTTGATCCATTCCAAAGTCAAAAA...ATTAAAAATAGCAATTTGACCAAGTTGGACTTCCACTACAAAGCAGCTGTTTTC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CCA 90 bp GCAAATAAGTCTTATACACTATATCCCCACATTCATACTAGTGAATGCCTCTCAATCGGCTCGTCTGTATaGTTGGTTTCTAAGATCTTT +
Preference number: 4 (lower is better)
Translates to: ANKSYTLYPHIHTSECLSIGSSV*LVSKIF
Trigger: AAAGATCTTAGAAACCAACCATACAGACGAGCCGAT...TGAGAGGCATTCACTAGTATGAATGTGGGGATATAGTGTATAAGACTTATTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475377.2
CDS-3UTR TCA 90 bp GCAAATAAGTCTTATACACTATATCCCCACATTCATACTAGTGAATGCCTCTCAAGGAGTTTCATCATGTaGCTTTCCTTCTTCCAAATT +
Preference number: 4 (lower is better)
Translates to: ANKSYTLYPHIHTSECLSRSFIM*LSFFQI
Trigger: AATTTGGAAGAAGGAAAGTCACATGATGAAACTCCT...TGAGAGGCATTCACTAGTATGAATGTGGGGATATAGTGTATAAGACTTATTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp GGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTACATCGATTTTACTAAACTaGATCATGAACCGATCTTCA +
Preference number: 4 (lower is better)
Translates to: GHDGTITMAGNEFNKNFTSILLN*IMNRSS
Trigger: TGAAGATCGGTTCATGATGCAGTTTAGTAAAATCGA...TGTAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp GCAAATAAGTCTTATACACTATATCCCCACATTCATACTAGTGAATGCCTCTCATTCTGCTTGCTTATATaGTTTCACAAACCGGACAAA +
Preference number: 4 (lower is better)
Translates to: ANKSYTLYPHIHTSECLSFCLLI*FHKPDK
Trigger: TTTGTCCGGTTTGTGAAAGCATATAAGCAAGCAGAA...TGAGAGGCATTCACTAGTATGAATGTGGGGATATAGTGTATAAGACTTATTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp GGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTACATTTTCCTCTTCTGCTTaGTTATATGCTTTCACAAAC +
Preference number: 4 (lower is better)
Translates to: GHDGTITMAGNEFNKNFTFSSSA*LYAFTN
Trigger: GTTTGTGAAAGCATATAAGCAAGCAGAAGAGGAAAA...TGTAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR GCA 90 bp GAAAACAGCTGCTTTGTAGTGGAAGTCCAACTTGGTCAAATTGCTATTTTTAATACTTTGGAAAACAGCTaGTTTGTAGTGGAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: ENSCFVVEVQLGQIAIFNTLENS*FVVEVQ
Trigger: TTGGACTTCCACTACAAAGCAGCTGTTTTCCAAAGT...ATTAAAAATAGCAATTTGACCAAGTTGGACTTCCACTACAAAGCAGCTGTTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CCA 90 bp TTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCTCAGAATTTCTTTCACCACATTaGATATATAGTGCAACAGTG +
Preference number: 4 (lower is better)
Translates to: LLIELVNFLARHQFLFSEFLSPH*IYSATV
Trigger: CACTGTTGCACTATATATCCAATGTGGTGAAAGAAA...TTCTGAGAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR TCA 90 bp GAAAACAGCTGCTTTGTAGTGGAAGTCCAACTTGGTCAAATTGCTATTTTTAATAATCGAAGTGAATGTTaGGTCCACAGAAAGACAAAA +
Preference number: 4 (lower is better)
Translates to: ENSCFVVEVQLGQIAIFNNRSEC*VHRKTK
Trigger: TTTTGTCTTTCTGTGGACTCAACATTCACTTCGATT...ATTAAAAATAGCAATTTGACCAAGTTGGACTTCCACTACAAAGCAGCTGTTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS GCA 90 bp CGCTGGGCGCCTATGTGCATGGTGCTCCGCTGGCACACCGCCCCCTaGCAGAGATCGCGGCCCCCGGCGCGTGGTCCCTCCTACTCGGCC +
Preference number: 5 (lower is better)
Translates to: RWAPMCMVLRWHTAP*QRSRPPARGPSYSA
Trigger: GGCCGAGTAGGAGGGACCACGCGCCGGGGGCCGCGATCTCTGGCAGGGGGCGGTGTGCCAGCGGAGCACCATGCACATAGGCGCCCAGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS GCA 90 bp ATCGGCAGCTTCAAAGGCACGTTGTGCGCCCTGAAATCGGTCTGCTaGGAATCCATGCTCCCTGCGTTGCCCATGTCGGCGGCGCGCCGG +
Preference number: 5 (lower is better)
Translates to: IGSFKGTLCALKSVC*ESMLPALPMSAARR
Trigger: CCGGCGCGCCGCCGACATGGGCAACGCAGGGAGCATGGATTCGCAGCAGACCGATTTCAGGGCGCACAACGTGCCTTTGAAGCTGCCGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS GCA 90 bp GGCATCGGCAGCTTCAAAGGCACGTTGTGCGCCCTGAAATCGGTCTaGTGCGAATCCATGCTCCCTGCGTTGCCCATGTCGGCGGCGCGC +
Preference number: 5 (lower is better)
Translates to: GIGSFKGTLCALKSV*CESMLPALPMSAAR
Trigger: GCGCGCCGCCGACATGGGCAACGCAGGGAGCATGGATTCGCAGCAGACCGATTTCAGGGCGCACAACGTGCCTTTGAAGCTGCCGATGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS GCA 90 bp GGGGGCGGCGGCGGCGGTGGCATAGGTGGTGTTACTGGACCATTTTaGACTGTTTCAGGTGTGTCTGATGAGGGAGGCAGTGGTGGTGGA +
Preference number: 5 (lower is better)
Translates to: GGGGGGGIGGVTGPF*TVSGVSDEGGSGGG
Trigger: TCCACCACCACTGCCTCCCTCATCAGACACACCTGAAACAGTGCAAAATGGTCCAGTAACACCACCTATGCCACCGCCGCCGCCGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS TCA 90 bp CACCTGGCTCTGGCATCGGCAGCTTCAAAGGCACGTTGTGCGCCCTaGAATCGGTCTGCTGCGAATCCATGCTCCCTGCGTTGCCCATGT +
Preference number: 5 (lower is better)
Translates to: HLALASAASKARCAP*NRSAANPCSLRCPC
Trigger: ACATGGGCAACGCAGGGAGCATGGATTCGCAGCAGACCGATTTCAGGGCGCACAACGTGCCTTTGAAGCTGCCGATGCCAGAGCCAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS GCA 90 bp CGGGAGACACTGTTGCCCACAGGTGAGGGCAGGTTGCTCCCTCTGTaGAGGTCCTCGATGGACCTACTCCAGGGCTTTGATTTGTCCACC +
Preference number: 5 (lower is better)
Translates to: RETLLPTGEGRLLPL*RSSMDLLQGFDLST
Trigger: GGTGGACAAATCAAAGCCCTGGAGTAGGTCCATCGAGGACCTGCACAGAGGGAGCAACCTGCCCTCACCTGTGGGCAACAGTGTCTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS GCA 90 bp TCCAGTTCACCTGGCTCTGGCATCGGCAGCTTCAAAGGCACGTTGTaGGCCCTGAAATCGGTCTGCTGCGAATCCATGCTCCCTGCGTTG +
Preference number: 5 (lower is better)
Translates to: SSSPGSGIGSFKGTL*ALKSVCCESMLPAL
Trigger: CAACGCAGGGAGCATGGATTCGCAGCAGACCGATTTCAGGGCGCACAACGTGCCTTTGAAGCTGCCGATGCCAGAGCCAGGTGAACTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS CCA 90 bp AGCATTCAGCACGATGGCAAATCGCTCCTCCAGTTCACCTGGCTCTaGCATCGGCAGCTTCAAAGGCACGTTGTGCGCCCTGAAATCGGT +
Preference number: 5 (lower is better)
Translates to: SIQHDGKSLLQFTWL*HRQLQRHVVRPEIG
Trigger: ACCGATTTCAGGGCGCACAACGTGCCTTTGAAGCTGCCGATGCCAGAGCCAGGTGAACTGGAGGAGCGATTTGCCATCGTGCTGAATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS GCA 90 bp TATTATATCGCAGTGCAGAATGTCTTCCAGAGCGGGAGACACTGTTaGCCACAGGTGAGGGCAGGTTGCTCCCTCTGTGCAGGTCCTCGA +
Preference number: 5 (lower is better)
Translates to: YYIAVQNVFQSGRHC*PQVRAGCSLCAGPR
Trigger: TCGAGGACCTGCACAGAGGGAGCAACCTGCCCTCACCTGTGGGCAACAGTGTCTCCCGCTCTGGAAGACATTCTGCACTGCGATATAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS CCA 90 bp GTTCATAGCATTCAGCACGATGGCAAATCGCTCCTCCAGTTCACCTaGCTCTGGCATCGGCAGCTTCAAAGGCACGTTGTGCGCCCTGAA +
Preference number: 5 (lower is better)
Translates to: VHSIQHDGKSLLQFT*LWHRQLQRHVVRPE
Trigger: TTCAGGGCGCACAACGTGCCTTTGAAGCTGCCGATGCCAGAGCCAGGTGAACTGGAGGAGCGATTTGCCATCGTGCTGAATGCTATGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS TCA 90 bp AAAGCCTACGACCCTCAGGAACAATCAGACAACAGTCCTTGCAGATaGCACTTTGACACTGGAGGAAGGTTGGCAAGAGGCGCGCAAGTA +
Preference number: 5 (lower is better)
Translates to: KAYDPQEQSDNSPCR*HFDTGGRLARGAQV
Trigger: TACTTGCGCGCCTCTTGCCAACCTTCCTCCAGTGTCAAAGTGTCATCTGCAAGGACTGTTGTCTGATTGTTCCTGAGGGTCGTAGGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497192.1
CDS GCA 90 bp CCCTCATTGTTGAGGATGAACTCCTTCAGCAGCGTGTTATGGTCATaGATGGTGTACTCTCTCTTGGTCAAGTCCATTCCCCTCTGGAGC +
Preference number: 5 (lower is better)
Translates to: PSLLRMNSFSSVLWS*MVYSLLVKSIPLWS
Trigger: GCTCCAGAGGGGAATGGACTTGACCAAGAGAGAGTACACCATGCATGACCATAACACGCTGCTGAAGGAGTTCATCCTCAACAATGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp GCAAATAAGTCTTATACACTATATCCCCACATTCATACTAGTGAATGCCTCTCATCCATGCTCCCTGCGTaGCCCATGTCGGCGGCGCGC +
Preference number: 5 (lower is better)
Translates to: ANKSYTLYPHIHTSECLSSMLPA*PMSAAR
Trigger: GCGCGCCGCCGACATGGGCAACGCAGGGAGCATGGA...TGAGAGGCATTCACTAGTATGAATGTGGGGATATAGTGTATAAGACTTATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CAA 90 bp AGCTTCAGTCCAGTTTTTGACTTTGGAATGGATCAAGTGCCCTGCCAGAGAGGAGCATCCTGTGCGATCTaGGCATCATCCTGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: SFSPVFDFGMDQVPCQRGASCAI*ASSCSF
Trigger: GAAGCTGCAGGATGATGCCAAGATCGCACAGGATGC...TCCTCTCTGGCAGGGCACTTGATCCATTCCAAAGTCAAAAACTGGACTGAAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS TCA 90 bp CGACCCTCAGGAACAATCAGACAACAGTCCTTGCAGATGACACTTTaGCACTGGAGGAAGGTTGGCAAGAGGCGCGCAAGTAGGTTTTTA +
Preference number: 5 (lower is better)
Translates to: RPSGTIRQQSLQMTL*HWRKVGKRRASRFL
Trigger: TAAAAACCTACTTGCGCGCCTCTTGCCAACCTTCCTCCAGTGTCAAAGTGTCATCTGCAAGGACTGTTGTCTGATTGTTCCTGAGGGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497192.1
CDS CCA 90 bp AGCTTCCCCTCATTGTTGAGGATGAACTCCTTCAGCAGCGTGTTATaGTCATGCATGGTGTACTCTCTCTTGGTCAAGTCCATTCCCCTC +
Preference number: 5 (lower is better)
Translates to: SFPSLLRMNSFSSVL*SCMVYSLLVKSIPL
Trigger: GAGGGGAATGGACTTGACCAAGAGAGAGTACACCATGCATGACCATAACACGCTGCTGAAGGAGTTCATCCTCAACAATGAGGGGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp AGCTTCAGTCCAGTTTTTGACTTTGGAATGGATCAAGTGCCCTGCCAGAGAGGACCCCTCTGGAGCTCCTaGACATCCAGCAAAACATTC +
Preference number: 5 (lower is better)
Translates to: SFSPVFDFGMDQVPCQRGPLWSS*TSSKTF
Trigger: GAATGTTTTGCTGGATGTCAAGGAGCTCCAGAGGGG...TCCTCTCTGGCAGGGCACTTGATCCATTCCAAAGTCAAAAACTGGACTGAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS TCA 90 bp TGGTGTACTCTCTCTTGGTCAAGTCCATTCCCCTCTGGAGCTCCTTaGCATCCAGCAAAACATTCTCAAGGGAGACTGCAGCAGCTTTTT +
Preference number: 5 (lower is better)
Translates to: WCTLSWSSPFPSGAP*HPAKHSQGRLQQLF
Trigger: AAAAAGCTGCTGCAGTCTCCCTTGAGAATGTTTTGCTGGATGTCAAGGAGCTCCAGAGGGGAATGGACTTGACCAAGAGAGAGTACACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp AATAAGTCTTATACACTATATCCCCACATTCATACTAGTGAATGCCTCTCACAGGAGCGGGAGACACTGTaGCCCACAGGTGAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: NKSYTLYPHIHTSECLSQERETL*PTGEGR
Trigger: CCTGCCCTCACCTGTGGGCAACAGTGTCTCCCGCTC...CTGTGAGAGGCATTCACTAGTATGAATGTGGGGATATAGTGTATAAGACTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CAA 90 bp TGCAGTTGCATCCTGTTTGCACTTTGCCAGGGCCTGGTTATAGACAAAAGGAGTATGGTGTACTCTCTCTaGGTCAAGTCCATTCCCCTC +
Preference number: 5 (lower is better)
Translates to: CSCILFALCQGLVIDKRSMVYSL*VKSIPL
Trigger: GAGGGGAATGGACTTGACCAAGAGAGAGTACACCAT...ACTCCTTTTGTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATGCAACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp AGCTTCAGTCCAGTTTTTGACTTTGGAATGGATCAAGTGCCCTGCCAGAGAGGAATGGTGTACTCTCTCTaGGTCAAGTCCATTCCCCTC +
Preference number: 5 (lower is better)
Translates to: SFSPVFDFGMDQVPCQRGMVYSL*VKSIPL
Trigger: GAGGGGAATGGACTTGACCAAGAGAGAGTACACCAT...TCCTCTCTGGCAGGGCACTTGATCCATTCCAAAGTCAAAAACTGGACTGAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp TTATGGGAATGTGCCCGCAGGTGGCAGTTTAATCTTTCTGTAAATAGGTACACTGCAGTTGCATCCTGTTaGCACTTTGCCAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: LWECARRWQFNLSVNRYTAVASC*HFARAW
Trigger: CCAGGCCCTGGCAAAGTGCAAACAGGATGCAACTGC...AGTGTACCTATTTACAGAAAGATTAAACTGCCACCTGCGGGCACATTCCCATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS TCA 90 bp GAGCCTCTCGATTTTACTAAACTGCATCATGAACCGATCTTCATCTaGCAAGTTTTCCAGAGGCTTCCTTTCCCGCTCGTAGAGCCGAAG +
Preference number: 5 (lower is better)
Translates to: EPLDFTKLHHEPIFI*QVFQRLPFPLVEPK
Trigger: CTTCGGCTCTACGAGCGGGAAAGGAAGCCTCTGGAAAACTTGTCAGATGAAGATCGGTTCATGATGCAGTTTAGTAAAATCGAGAGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp TTATGGGAATGTGCCCGCAGGTGGCAGTTTAATCTTTCTGTAAATAGGTACACTCTCCAGGGCTTTGATTaGTCCACCGAGCTCTCCACA +
Preference number: 5 (lower is better)
Translates to: LWECARRWQFNLSVNRYTLQGFD*STELST
Trigger: TGTGGAGAGCTCGGTGGACAAATCAAAGCCCTGGAG...AGTGTACCTATTTACAGAAAGATTAAACTGCCACCTGCGGGCACATTCCCATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CAA 90 bp AATAAGTCTTATACACTATATCCCCACATTCATACTAGTGAATGCCTCTCACAGACAGGTGAGGGCAGGTaGCTCCCTCTGTGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: NKSYTLYPHIHTSECLSQTGEGR*LPLCRS
Trigger: GGACCTGCACAGAGGGAGCAACCTGCCCTCACCTGT...CTGTGAGAGGCATTCACTAGTATGAATGTGGGGATATAGTGTATAAGACTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CAA 90 bp AGCTTCAGTCCAGTTTTTGACTTTGGAATGGATCAAGTGCCCTGCCAGAGAGGAGCTGCTAATCCTGAGTaGAAAACCACTGTGGGTGAA +
Preference number: 5 (lower is better)
Translates to: SFSPVFDFGMDQVPCQRGAANPE*KTTVGE
Trigger: TTCACCCACAGTGGTTTTCAACTCAGGATTAGCAGC...TCCTCTCTGGCAGGGCACTTGATCCATTCCAAAGTCAAAAACTGGACTGAAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CAA 90 bp CATCCTGTTTGCACTTTGCCAGGGCCTGGTTATAGACAAAAGGAGTTTCATCATCCCCTCTGGAGCTCCTaGACATCCAGCAAAACATTC +
Preference number: 5 (lower is better)
Translates to: HPVCTLPGPGYRQKEFHHPLWSS*TSSKTF
Trigger: GAATGTTTTGCTGGATGTCAAGGAGCTCCAGAGGGG...ATGATGAAACTCCTTTTGTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp AGCTTCAGTCCAGTTTTTGACTTTGGAATGGATCAAGTGCCCTGCCAGAGAGGATTCAGCTTCCCCTCATaGTTGAGGATGAACTCCTTC +
Preference number: 5 (lower is better)
Translates to: SFSPVFDFGMDQVPCQRGFSFPS*LRMNSF
Trigger: GAAGGAGTTCATCCTCAACAATGAGGGGAAGCTGAA...TCCTCTCTGGCAGGGCACTTGATCCATTCCAAAGTCAAAAACTGGACTGAAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp GCAAATAAGTCTTATACACTATATCCCCACATTCATACTAGTGAATGCCTCTCAAGGAAGCGGCCCCCATaGTGGGTCCCACAGAGTTAC +
Preference number: 5 (lower is better)
Translates to: ANKSYTLYPHIHTSECLSRKRPP*WVPQSY
Trigger: GTAACTCTGTGGGACCCACAATGGGGGCCGCTTCCT...TGAGAGGCATTCACTAGTATGAATGTGGGGATATAGTGTATAAGACTTATTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CAA 90 bp GGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTACAGCAGTTGCATCCTGTTaGCACTTTGCCAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: GHDGTITMAGNEFNKNFTAVASC*HFARAW
Trigger: CCAGGCCCTGGCAAAGTGCAAACAGGATGCAACTGC...TGTAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp GGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTACAAGCTTCAAAGGCACGTaGTGCGCCCTGAAATCGGTC +
Preference number: 5 (lower is better)
Translates to: GHDGTITMAGNEFNKNFTSFKGT*CALKSV
Trigger: GACCGATTTCAGGGCGCACAACGTGCCTTTGAAGCT...TGTAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CAA 90 bp CAGTGGCTTAGTGGGCCATCTAGTCCCATTACGTATTATTTAAGCTTAATACCAACCTACTCCAGGGCTTaGATTTGTCCACCGAGCTCT +
Preference number: 5 (lower is better)
Translates to: QWLSGPSSPITYYLSLIPTYSRA*ICPPSS
Trigger: AGAGCTCGGTGGACAAATCAAAGCCCTGGAGTAGGT...TGGTATTAAGCTTAAATAATACGTAATGGGACTAGATGGCCCACTAAGCCACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CAA 90 bp CGAAGACATCTCAGCAAAGGACCCACAGCAGATGCATTGATGTTATTTACAACAAGCTTCCCCTCATTGTaGAGGATGAACTCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: RRHLSKGPTADALMLFTTSFPSL*RMNSFS
Trigger: GCTGAAGGAGTTCATCCTCAACAATGAGGGGAAGCT...TGTTGTAAATAACATCAATGCATCTGCTGTGGGTCCTTTGCTGAGATGTCTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp TGGGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTAGCATCCTGTGCGATCTaGGCATCATCCTGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: WAMMGQSQWQVMSLIRTLASCAI*ASSCSF
Trigger: GAAGCTGCAGGATGATGCCAAGATCGCACAGGATGC...TAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp TTATGGGAATGTGCCCGCAGGTGGCAGTTTAATCTTTCTGTAAATAGGTACACTCATCCTGTTTGCACTTaGCCAGGGCCTGGTTATAGA +
Preference number: 5 (lower is better)
Translates to: LWECARRWQFNLSVNRYTHPVCT*PGPGYR
Trigger: TCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATG...AGTGTACCTATTTACAGAAAGATTAAACTGCCACCTGCGGGCACATTCCCATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp GAAAACAGCTGCTTTGTAGTGGAAGTCCAACTTGGTCAAATTGCTATTTTTAATAACCGAGAGCCACGCTaGGCGGTGCGAGCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: ENSCFVVEVQLGQIAIFNNREPR*AVRAVK
Trigger: CTTTACTGCTCGCACCGCCAAGCGTGGCTCTCGGTT...ATTAAAAATAGCAATTTGACCAAGTTGGACTTCCACTACAAAGCAGCTGTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475377.2
CDS TCA 90 bp AACACACATGGCCTTGGCCAGAGCCATTTGAGGTCATCATTTGGTTaGCTAACACATCATTGTATTAAAAGACGTCTTAAGGGCCAAGGG +
Preference number: 5 (lower is better)
Translates to: NTHGLGQSHLRSSFG*LTHHCIKRRLKGQG
Trigger: CCCTTGGCCCTTAAGACGTCTTTTAATACAATGATGTGTTAGTCAACCAAATGATGACCTCAAATGGCTCTGGCCAAGGCCATGTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497192.1
CDS GCA 90 bp GCCATGATGGTCATCTTCTGCATGAGCCTCTCGATTTTACTAAACTaGATCATGAACCGATCTTCATCTGACAAGTTTTCCAGAGGCTTC +
Preference number: 5 (lower is better)
Translates to: AMMVIFCMSLSILLN*IMNRSSSDKFSRGF
Trigger: GAAGCCTCTGGAAAACTTGTCAGATGAAGATCGGTTCATGATGCAGTTTAGTAAAATCGAGAGGCTCATGCAGAAGATGACCATCATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp TTATGGGAATGTGCCCGCAGGTGGCAGTTTAATCTTTCTGTAAATAGGTACACTTCAGTGTGTTTCAGCTaGTCCAAGTATTCGTCCAGG +
Preference number: 5 (lower is better)
Translates to: LWECARRWQFNLSVNRYTSVCFS*SKYSSR
Trigger: CCTGGACGAATACTTGGACAAGCTGAAACACACTGA...AGTGTACCTATTTACAGAAAGATTAAACTGCCACCTGCGGGCACATTCCCATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CAA 90 bp GAATGCTTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCAGCTTCCCCTCATTGTaGAGGATGAACTCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: ECLLIELVNFLARHQFLFSFPSL*RMNSFS
Trigger: GCTGAAGGAGTTCATCCTCAACAATGAGGGGAAGCT...GAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAAGCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp CGAAGACATCTCAGCAAAGGACCCACAGCAGATGCATTGATGTTATTTACAACATTCAGCTTCCCCTCATaGTTGAGGATGAACTCCTTC +
Preference number: 5 (lower is better)
Translates to: RRHLSKGPTADALMLFTTFSFPS*LRMNSF
Trigger: GAAGGAGTTCATCCTCAACAATGAGGGGAAGCTGAA...TGTTGTAAATAACATCAATGCATCTGCTGTGGGTCCTTTGCTGAGATGTCTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp TTATGGGAATGTGCCCGCAGGTGGCAGTTTAATCTTTCTGTAAATAGGTACACTTATGAGAAGGAGACTTaGGATCCTGCTGCTCCATCA +
Preference number: 5 (lower is better)
Translates to: LWECARRWQFNLSVNRYTYEKET*DPAAPS
Trigger: TGATGGAGCAGCAGGATCCAAAGTCTCCTTCTCATA...AGTGTACCTATTTACAGAAAGATTAAACTGCCACCTGCGGGCACATTCCCATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp CATCCTGTTTGCACTTTGCCAGGGCCTGGTTATAGACAAAAGGAGTTTCATCATGGCTCGTCTGTATGGTaGGTTTCTAAGATCTGTGAT +
Preference number: 5 (lower is better)
Translates to: HPVCTLPGPGYRQKEFHHGSSVW*VSKICD
Trigger: ATCACAGATCTTAGAAACCAACCATACAGACGAGCC...ATGATGAAACTCCTTTTGTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CAA 90 bp CGAAGACATCTCAGCAAAGGACCCACAGCAGATGCATTGATGTTATTTACAACATTTGTGCCACTGCAGTaGCATCCTGTTTGCACTTTG +
Preference number: 5 (lower is better)
Translates to: RRHLSKGPTADALMLFTTFVPLQ*HPVCTL
Trigger: CAAAGTGCAAACAGGATGCAACTGCAGTGGCACAAA...TGTTGTAAATAACATCAATGCATCTGCTGTGGGTCCTTTGCTGAGATGTCTTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp GCACATAAAGTTCATGTGGGCAGTTTCATTCACGCACACCCTGTATTCATGCAGGCTTCAGTCCAGTTTTaGACTTTGGAATGGATCAAG +
Preference number: 5 (lower is better)
Translates to: AHKVHVGSFIHAHPVFMQASVQF*TLEWIK
Trigger: CTTGATCCATTCCAAAGTCAAAAACTGGACTGAAGC...CTGCATGAATACAGGGTGTGCGTGAATGAAACTGCCCACATGAACTTTATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS GCA 90 bp ATGCTTTCAGCAAAGTTCCCAATGAAGGCCATGATGGTCATCTTCTaGATGAGCCTCTCGATTTTACTAAACTGCATCATGAACCGATCT +
Preference number: 5 (lower is better)
Translates to: MLSAKFPMKAMMVIF*MSLSILLNCIMNRS
Trigger: AGATCGGTTCATGATGCAGTTTAGTAAAATCGAGAGGCTCATGCAGAAGATGACCATCATGGCCTTCATTGGGAACTTTGCTGAAAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS GCA 90 bp ACTGTCAGAGCATATTTCTCTATTAAAAATTTCAAGAATGCCAGATaGAATGATTTGTGCCTCCAGTCCCAGCTACTCAGGAGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: TVRAYFSIKNFKNAR*NDLCLQSQLLRRLR
Trigger: CCTCAGCCTCCTGAGTAGCTGGGACTGGAGGCACAAATCATTGCATCTGGCATTCTTGAAATTTTTAATAGAGAAATATGCTCTGACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492942.1
CDS-3UTR CAA 90 bp CGAAGACATCTCAGCAAAGGACCCACAGCAGATGCATTGATGTTATTTACAACAGTTCCTCTGCATGAGTaGCTTTTCCAGTTCCACAAT +
Preference number: 5 (lower is better)
Translates to: RRHLSKGPTADALMLFTTVPLHE*LFQFHN
Trigger: ATTGTGGAACTGGAAAAGCAACTCATGCAGAGGAAC...TGTTGTAAATAACATCAATGCATCTGCTGTGGGTCCTTTGCTGAGATGTCTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CAA 90 bp GCACATAAAGTTCATGTGGGCAGTTTCATTCACGCACACCCTGTATTCATGCAGTCTAGTAATGTCACTTaGTTTGATCCCTTCTGTGGT +
Preference number: 5 (lower is better)
Translates to: AHKVHVGSFIHAHPVFMQSSNVT*FDPFCG
Trigger: ACCACAGAAGGGATCAAACAAAGTGACATTACTAGA...CTGCATGAATACAGGGTGTGCGTGAATGAAACTGCCCACATGAACTTTATGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp CAGTGGCTTAGTGGGCCATCTAGTCCCATTACGTATTATTTAAGCTTAATACCATATGAGAAGGAGACTTaGGATCCTGCTGCTCCATCA +
Preference number: 5 (lower is better)
Translates to: QWLSGPSSPITYYLSLIPYEKET*DPAAPS
Trigger: TGATGGAGCAGCAGGATCCAAAGTCTCCTTCTCATA...TGGTATTAAGCTTAAATAATACGTAATGGGACTAGATGGCCCACTAAGCCACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp GCACATAAAGTTCATGTGGGCAGTTTCATTCACGCACACCCTGTATTCATGCAGTCCATTTTTAGGCACTaGTTAACAAGGGTTGAAAGG +
Preference number: 5 (lower is better)
Translates to: AHKVHVGSFIHAHPVFMQSIFRH*LTRVER
Trigger: CCTTTCAACCCTTGTTAACAAGTGCCTAAAAATGGA...CTGCATGAATACAGGGTGTGCGTGAATGAAACTGCCCACATGAACTTTATGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp CGAAGACATCTCAGCAAAGGACCCACAGCAGATGCATTGATGTTATTTACAACAATAGCCTTTGAGCTTTaGAATGTATGTATGGGGAGG +
Preference number: 5 (lower is better)
Translates to: RRHLSKGPTADALMLFTTIAFEL*NVCMGR
Trigger: CCTCCCCATACATACATTCAAAAGCTCAAAGGCTAT...TGTTGTAAATAACATCAATGCATCTGCTGTGGGTCCTTTGCTGAGATGTCTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CAA 90 bp GAATGCTTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCTCGTCCAGGCCTAATTaGGTAAATTCATACTGCAGG +
Preference number: 5 (lower is better)
Translates to: ECLLIELVNFLARHQFLFSSRPN*VNSYCR
Trigger: CCTGCAGTATGAATTTACCAAATTAGGCCTGGACGA...GAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAAGCATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CAA 90 bp GCACATAAAGTTCATGTGGGCAGTTTCATTCACGCACACCCTGTATTCATGCAGCCTTGGGCTTTTGTCTaGAATATTTCCTCAAATTCA +
Preference number: 5 (lower is better)
Translates to: AHKVHVGSFIHAHPVFMQPWAFV*NISSNS
Trigger: TGAATTTGAGGAAATATTCAAGACAAAAGCCCAAGG...CTGCATGAATACAGGGTGTGCGTGAATGAAACTGCCCACATGAACTTTATGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp GGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTACATCACTTCATTCTCAGTaGGTAGGAACCGCATCAAGC +
Preference number: 5 (lower is better)
Translates to: GHDGTITMAGNEFNKNFTSLHSQ*VGTASS
Trigger: GCTTGATGCGGTTCCTACCAACTGAGAATGAAGTGA...TGTAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp GCAAATAAGTCTTATACACTATATCCCCACATTCATACTAGTGAATGCCTCTCACATCCTGTTTGCACTTaGCCAGGGCCTGGTTATAGA +
Preference number: 5 (lower is better)
Translates to: ANKSYTLYPHIHTSECLSHPVCT*PGPGYR
Trigger: TCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATG...TGAGAGGCATTCACTAGTATGAATGTGGGGATATAGTGTATAAGACTTATTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp GCACATAAAGTTCATGTGGGCAGTTTCATTCACGCACACCCTGTATTCATGCAGTGTAACCTTGAATGCTaGTTGATAGAGCTAGTAAAC +
Preference number: 5 (lower is better)
Translates to: AHKVHVGSFIHAHPVFMQCNLEC*LIELVN
Trigger: GTTTACTAGCTCTATCAACAAGCATTCAAGGTTACA...CTGCATGAATACAGGGTGTGCGTGAATGAAACTGCCCACATGAACTTTATGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS GCA 90 bp CCACAAACCTCTTTAAAGTTATCAAATGCTGATAAAATGATTTCATaGCCGCCTCTGACAAGACAAACGGCTGCCAACAGTTCTAAGACA +
Preference number: 5 (lower is better)
Translates to: PQTSLKLSNADKMIS*PPLTRQTAANSSKT
Trigger: TGTCTTAGAACTGTTGGCAGCCGTTTGTCTTGTCAGAGGCGGGCATGAAATCATTTTATCAGCATTTGATAACTTTAAAGAGGTTTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000492942.1
CDS-3UTR CAA 90 bp GAATGCTTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCCACTTGTGTAGATTCTaGAACACGCCGTCTGAATTT +
Preference number: 5 (lower is better)
Translates to: ECLLIELVNFLARHQFLFHLCRF*NTPSEF
Trigger: AAATTCAGACGGCGTGTTCAAGAATCTACACAAGTG...GAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAAGCATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CAA 90 bp TTATGGGAATGTGCCCGCAGGTGGCAGTTTAATCTTTCTGTAAATAGGTACACTTCAGAGTTCTTCTGCTaGGCAATGTATTATATCGCA +
Preference number: 5 (lower is better)
Translates to: LWECARRWQFNLSVNRYTSEFFC*AMYYIA
Trigger: TGCGATATAATACATTGCCAAGCAGAAGAACTCTGA...AGTGTACCTATTTACAGAAAGATTAAACTGCCACCTGCGGGCACATTCCCATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CAA 90 bp GGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTACATGTTACTGGACCATTTaGCACTGTTTCAGGTGTGTC +
Preference number: 5 (lower is better)
Translates to: GHDGTITMAGNEFNKNFTCYWTI*HCFRCV
Trigger: GACACACCTGAAACAGTGCAAAATGGTCCAGTAACA...TGTAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CAA 90 bp GCAAATAAGTCTTATACACTATATCCCCACATTCATACTAGTGAATGCCTCTCATCACTTCATTCTCAGTaGGTAGGAACCGCATCAAGC +
Preference number: 5 (lower is better)
Translates to: ANKSYTLYPHIHTSECLSSLHSQ*VGTASS
Trigger: GCTTGATGCGGTTCCTACCAACTGAGAATGAAGTGA...TGAGAGGCATTCACTAGTATGAATGTGGGGATATAGTGTATAAGACTTATTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp TTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCTCAGAACTTGCTGCTGCCTCTTaGATTTATGAGAAGGAGACT +
Preference number: 5 (lower is better)
Translates to: LLIELVNFLARHQFLFSELAAAS*IYEKET
Trigger: AGTCTCCTTCTCATAAATCAAAGAGGCAGCAGCAAG...TTCTGAGAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp TGGGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTACTTGCTGCTGCCTCTTaGATTTATGAGAAGGAGACT +
Preference number: 5 (lower is better)
Translates to: WAMMGQSQWQVMSLIRTLLAAAS*IYEKET
Trigger: AGTCTCCTTCTCATAAATCAAAGAGGCAGCAGCAAG...TAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp GCAAATAAGTCTTATACACTATATCCCCACATTCATACTAGTGAATGCCTCTCATTTGTGCCACTGCAGTaGCATCCTGTTTGCACTTTG +
Preference number: 5 (lower is better)
Translates to: ANKSYTLYPHIHTSECLSFVPLQ*HPVCTL
Trigger: CAAAGTGCAAACAGGATGCAACTGCAGTGGCACAAA...TGAGAGGCATTCACTAGTATGAATGTGGGGATATAGTGTATAAGACTTATTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp CATCCTGTTTGCACTTTGCCAGGGCCTGGTTATAGACAAAAGGAGTTTCATCATAACCTTGAATGCTTGTaGATAGAGCTAGTAAACTTC +
Preference number: 5 (lower is better)
Translates to: HPVCTLPGPGYRQKEFHHNLECL*IELVNF
Trigger: GAAGTTTACTAGCTCTATCAACAAGCATTCAAGGTT...ATGATGAAACTCCTTTTGTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp ATTCACGCACACCCTGTATTCATGCAGGCCAGTCTCAGGTTCACATTGTTATTTTGTAACCTTGAATGCTaGTTGATAGAGCTAGTAAAC +
Preference number: 5 (lower is better)
Translates to: IHAHPVFMQASLRFTLLFCNLEC*LIELVN
Trigger: GTTTACTAGCTCTATCAACAAGCATTCAAGGTTACA...AAATAACAATGTGAACCTGAGACTGGCCTGCATGAATACAGGGTGTGCGTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475377.2
CDS-3UTR CAA 90 bp GGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTACAGTCCAGTTTTTGACTTaGGAATGGATCAAGTGCCCT +
Preference number: 5 (lower is better)
Translates to: GHDGTITMAGNEFNKNFTVQFLT*EWIKCP
Trigger: AGGGCACTTGATCCATTCCAAAGTCAAAAACTGGAC...TGTAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp TGGGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTAGTCCAGTTTTTGACTTaGGAATGGATCAAGTGCCCT +
Preference number: 5 (lower is better)
Translates to: WAMMGQSQWQVMSLIRTLVQFLT*EWIKCP
Trigger: AGGGCACTTGATCCATTCCAAAGTCAAAAACTGGAC...TAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp GGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTACATCTGCTAATCCTGAGTaGAAAACCACTGTGGGTGAA +
Preference number: 5 (lower is better)
Translates to: GHDGTITMAGNEFNKNFTSANPE*KTTVGE
Trigger: TTCACCCACAGTGGTTTTCAACTCAGGATTAGCAGA...TGTAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475377.2
CDS-3UTR CAA 90 bp GGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTACACTAAGACAAGGGCTTTaGTTCTGGGATTCTTGTTGT +
Preference number: 5 (lower is better)
Translates to: GHDGTITMAGNEFNKNFTLRQGL*FWDSCC
Trigger: ACAACAAGAATCCCAGAACAAAAGCCCTTGTCTTAG...TGTAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CAA 90 bp CGAAGACATCTCAGCAAAGGACCCACAGCAGATGCATTGATGTTATTTACAACATCATCATCAATTTCATaGAAGACTGTGCCATTGATC +
Preference number: 5 (lower is better)
Translates to: RRHLSKGPTADALMLFTTSSSIS*KTVPLI
Trigger: GATCAATGGCACAGTCTTCAATGAAATTGATGATGA...TGTTGTAAATAACATCAATGCATCTGCTGTGGGTCCTTTGCTGAGATGTCTTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp CGAAGACATCTCAGCAAAGGACCCACAGCAGATGCATTGATGTTATTTACAACATGTGGTATCTTCTGTTaGCTTGAAGAAAGATCAATG +
Preference number: 5 (lower is better)
Translates to: RRHLSKGPTADALMLFTTCGIFC*LEERSM
Trigger: CATTGATCTTTCTTCAAGCAAACAGAAGATACCACA...TGTTGTAAATAACATCAATGCATCTGCTGTGGGTCCTTTGCTGAGATGTCTTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp GAATGCTTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCGTAATGTCACTTTGTTaGATCCCTTCTGTGGTATCT +
Preference number: 5 (lower is better)
Translates to: ECLLIELVNFLARHQFLFVMSLC*IPSVVS
Trigger: AGATACCACAGAAGGGATCAAACAAAGTGACATTAC...GAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAAGCATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp CGAAGACATCTCAGCAAAGGACCCACAGCAGATGCATTGATGTTATTTACAACATTCTGTCTGTTGACTTaGTATCTAAGAGCAGATCTA +
Preference number: 5 (lower is better)
Translates to: RRHLSKGPTADALMLFTTFCLLT*YLRADL
Trigger: TAGATCTGCTCTTAGATACAAAGTCAACAGACAGAA...TGTTGTAAATAACATCAATGCATCTGCTGTGGGTCCTTTGCTGAGATGTCTTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp TTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCTCAGAAGCTTCAGTCCAGTTTTaGACTTTGGAATGGATCAAG +
Preference number: 5 (lower is better)
Translates to: LLIELVNFLARHQFLFSEASVQF*TLEWIK
Trigger: CTTGATCCATTCCAAAGTCAAAAACTGGACTGAAGC...TTCTGAGAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp GGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTACATTCACAGAGAAAAGCTaGATTGGCCCATCTGCTAAT +
Preference number: 5 (lower is better)
Translates to: GHDGTITMAGNEFNKNFTFTEKS*IGPSAN
Trigger: ATTAGCAGATGGGCCAATCAAGCTTTTCTCTGTGAA...TGTAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475377.2
CDS-3UTR CAA 90 bp GAAAACAGCTGCTTTGTAGTGGAAGTCCAACTTGGTCAAATTGCTATTTTTAATGTTCTGGGATTCTTGTaGTTCAGGCTTAGTGCAATC +
Preference number: 5 (lower is better)
Translates to: ENSCFVVEVQLGQIAIFNVLGFL*FRLSAI
Trigger: GATTGCACTAAGCCTGAACAACAAGAATCCCAGAAC...ATTAAAAATAGCAATTTGACCAAGTTGGACTTCCACTACAAAGCAGCTGTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CAA 90 bp GAATGCTTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCTGTGAACTTGAGTATTaGCATCTTTGTAGATTTCCC +
Preference number: 5 (lower is better)
Translates to: ECLLIELVNFLARHQFLFCELEY*HLCRFP
Trigger: GGGAAATCTACAAAGATGCAAATACTCAAGTTCACA...GAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAAGCATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CAA 90 bp TTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCTCAGAACAGGGTAGACTGTCTTaGAATTGCTTCTTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: LLIELVNFLARHQFLFSEQGRLS*NCFFFF
Trigger: GAAAAAGAAGAAGCAATTCAAAGACAGTCTACCCTG...TTCTGAGAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CAA 90 bp CAGTGGCTTAGTGGGCCATCTAGTCCCATTACGTATTATTTAAGCTTAATACCATCATCATCAATTTCATaGAAGACTGTGCCATTGATC +
Preference number: 5 (lower is better)
Translates to: QWLSGPSSPITYYLSLIPSSSIS*KTVPLI
Trigger: GATCAATGGCACAGTCTTCAATGAAATTGATGATGA...TGGTATTAAGCTTAAATAATACGTAATGGGACTAGATGGCCCACTAAGCCACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp CAGTGGCTTAGTGGGCCATCTAGTCCCATTACGTATTATTTAAGCTTAATACCATGTGGTATCTTCTGTTaGCTTGAAGAAAGATCAATG +
Preference number: 5 (lower is better)
Translates to: QWLSGPSSPITYYLSLIPCGIFC*LEERSM
Trigger: CATTGATCTTTCTTCAAGCAAACAGAAGATACCACA...TGGTATTAAGCTTAAATAATACGTAATGGGACTAGATGGCCCACTAAGCCACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp GGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTACAGTAATGTCACTTTGTTaGATCCCTTCTGTGGTATCT +
Preference number: 5 (lower is better)
Translates to: GHDGTITMAGNEFNKNFTVMSLC*IPSVVS
Trigger: AGATACCACAGAAGGGATCAAACAAAGTGACATTAC...TGTAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp TTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCTCAGAAGATTTTTGGCCCTGTTaGCTTCTAGTAATGTCACTT +
Preference number: 5 (lower is better)
Translates to: LLIELVNFLARHQFLFSEDFWPC*LLVMSL
Trigger: AAGTGACATTACTAGAAGCAAACAGGGCCAAAAATC...TTCTGAGAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp TGGGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTAGATTTTTGGCCCTGTTaGCTTCTAGTAATGTCACTT +
Preference number: 5 (lower is better)
Translates to: WAMMGQSQWQVMSLIRTLDFWPC*LLVMSL
Trigger: AAGTGACATTACTAGAAGCAAACAGGGCCAAAAATC...TAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp AATAAGTCTTATACACTATATCCCCACATTCATACTAGTGAATGCCTCTCACAGGTTATGGCAAGATTTTaGGCCCTGTTTGCTTCTAGT +
Preference number: 5 (lower is better)
Translates to: NKSYTLYPHIHTSECLSQVMARF*ALFASS
Trigger: ACTAGAAGCAAACAGGGCCAAAAATCTTGCCATAAC...CTGTGAGAGGCATTCACTAGTATGAATGTGGGGATATAGTGTATAAGACTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp TTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCTCAGAATCCATTTTTAGGCACTaGTTAACAAGGGTTGAAAGG +
Preference number: 5 (lower is better)
Translates to: LLIELVNFLARHQFLFSESIFRH*LTRVER
Trigger: CCTTTCAACCCTTGTTAACAAGTGCCTAAAAATGGA...TTCTGAGAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp GGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTACAAATGTGGTAGGTAACTaGTTCCCTAAACTGTCCTTA +
Preference number: 5 (lower is better)
Translates to: GHDGTITMAGNEFNKNFTNVVGN*FPKLSL
Trigger: TAAGGACAGTTTAGGGAACAAGTTACCTACCACATT...TGTAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp GAAAACAGCTGCTTTGTAGTGGAAGTCCAACTTGGTCAAATTGCTATTTTTAATTTTGTTCTGGGATTCTaGTTGTTCAGGCTTAGTGCA +
Preference number: 5 (lower is better)
Translates to: ENSCFVVEVQLGQIAIFNFVLGF*LFRLSA
Trigger: TGCACTAAGCCTGAACAACAAGAATCCCAGAACAAA...ATTAAAAATAGCAATTTGACCAAGTTGGACTTCCACTACAAAGCAGCTGTTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS-3UTR CAA 90 bp TGGGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTACCTTGGGCTTTTGTCTaGAATATTTCCTCAAATTCA +
Preference number: 5 (lower is better)
Translates to: WAMMGQSQWQVMSLIRTLPWAFV*NISSNS
Trigger: TGAATTTGAGGAAATATTCAAGACAAAAGCCCAAGG...TAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp AATAAGTCTTATACACTATATCCCCACATTCATACTAGTGAATGCCTCTCACAGTCTAGTAATGTCACTTaGTTTGATCCCTTCTGTGGT +
Preference number: 5 (lower is better)
Translates to: NKSYTLYPHIHTSECLSQSSNVT*FDPFCG
Trigger: ACCACAGAAGGGATCAAACAAAGTGACATTACTAGA...CTGTGAGAGGCATTCACTAGTATGAATGTGGGGATATAGTGTATAAGACTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp GAAAACAGCTGCTTTGTAGTGGAAGTCCAACTTGGTCAAATTGCTATTTTTAATGTTATGGCAAGATTTTaGGCCCTGTTTGCTTCTAGT +
Preference number: 5 (lower is better)
Translates to: ENSCFVVEVQLGQIAIFNVMARF*ALFASS
Trigger: ACTAGAAGCAAACAGGGCCAAAAATCTTGCCATAAC...ATTAAAAATAGCAATTTGACCAAGTTGGACTTCCACTACAAAGCAGCTGTTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp GGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTACATTTGCTTTCTGTCTGTaGACTTTGTATCTAAGAGCA +
Preference number: 5 (lower is better)
Translates to: GHDGTITMAGNEFNKNFTFAFCL*TLYLRA
Trigger: TGCTCTTAGATACAAAGTCAACAGACAGAAAGCAAA...TGTAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp TTGTTGATAGAGCTAGTAAACTTCCTTGCAAGGCACCAATTTCTGTTCTCAGAAAACCTTGAATGCTTGTaGATAGAGCTAGTAAACTTC +
Preference number: 5 (lower is better)
Translates to: LLIELVNFLARHQFLFSENLECL*IELVNF
Trigger: GAAGTTTACTAGCTCTATCAACAAGCATTCAAGGTT...TTCTGAGAACAGAAATTGGTGCCTTGCAAGGAAGTTTACTAGCTCTATCAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp AATAAGTCTTATACACTATATCCCCACATTCATACTAGTGAATGCCTCTCACAGAATGTGGTAGGTAACTaGTTCCCTAAACTGTCCTTA +
Preference number: 5 (lower is better)
Translates to: NKSYTLYPHIHTSECLSQNVVGN*FPKLSL
Trigger: TAAGGACAGTTTAGGGAACAAGTTACCTACCACATT...CTGTGAGAGGCATTCACTAGTATGAATGTGGGGATATAGTGTATAAGACTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp GGCCATGATGGGACAATCACAATGGCAGGTAATGAGTTTAATAAGAACTTTACAACATATATGTCAGCATaGAACTTTGGAAAACAGCTG +
Preference number: 5 (lower is better)
Translates to: GHDGTITMAGNEFNKNFTTYMSA*NFGKQL
Trigger: CAGCTGTTTTCCAAAGTTCAATGCTGACATATATGT...TGTAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCATCATGGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp GCAAATAAGTCTTATACACTATATCCCCACATTCATACTAGTGAATGCCTCTCATTCTGTCTGTTGACTTaGTATCTAAGAGCAGATCTA +
Preference number: 5 (lower is better)
Translates to: ANKSYTLYPHIHTSECLSFCLLT*YLRADL
Trigger: TAGATCTGCTCTTAGATACAAAGTCAACAGACAGAA...TGAGAGGCATTCACTAGTATGAATGTGGGGATATAGTGTATAAGACTTATTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS-3UTR CAA 90 bp GCAAATAAGTCTTATACACTATATCCCCACATTCATACTAGTGAATGCCTCTCAACATATATGTCAGCATaGAACTTTGGAAAACAGCTG +
Preference number: 5 (lower is better)
Translates to: ANKSYTLYPHIHTSECLSTYMSA*NFGKQL
Trigger: CAGCTGTTTTCCAAAGTTCAATGCTGACATATATGT...TGAGAGGCATTCACTAGTATGAATGTGGGGATATAGTGTATAAGACTTATTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS CCA 72 bp CACCGCCCCCTGCCAGAGATCGCGGCCCCCGGCGCGTaGTCCCTCCTACTCGGCCTTCTGCCGGGCCCGCGG +
Preference number: 6 (lower is better)
Translates to: HRPLPEIAAPGA*SLLLGLLPGPR
Trigger: CCGCGGGCCCGGCAGAAGGCCGAGTAGGAGGGACCACGCGCCGGGGGCCGCGATCTCTGGCAGGGGGCGGTG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS GCA 72 bp CCTATGTGCATGGTGCTCCGCTGGCACACCGCCCCCTaGCAGAGATCGCGGCCCCCGGCGCGTGGTCCCTCC +
Preference number: 6 (lower is better)
Translates to: PMCMVLRWHTAP*QRSRPPARGPS
Trigger: GGAGGGACCACGCGCCGGGGGCCGCGATCTCTGGCAGGGGGCGGTGTGCCAGCGGAGCACCATGCACATAGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS GCA 72 bp CGCCCTGAAATCGGTCTGCTGCGAATCCATGCTCCCTaGGTTGCCCATGTCGGCGGCGCGCCGGGGCCGGGG +
Preference number: 6 (lower is better)
Translates to: RPEIGLLRIHAP*VAHVGGAPGPG
Trigger: CCCCGGCCCCGGCGCGCCGCCGACATGGGCAACGCAGGGAGCATGGATTCGCAGCAGACCGATTTCAGGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS CAA 72 bp CTGAAATCGGTCTGCTGCGAATCCATGCTCCCTGCGTaGCCCATGTCGGCGGCGCGCCGGGGCCGGGGGCTG +
Preference number: 6 (lower is better)
Translates to: LKSVCCESMLPA*PMSAARRGRGL
Trigger: CAGCCCCCGGCCCCGGCGCGCCGCCGACATGGGCAACGCAGGGAGCATGGATTCGCAGCAGACCGATTTCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS CAA 72 bp CGCAGTGCAGAATGTCTTCCAGAGCGGGAGACACTGTaGCCCACAGGTGAGGGCAGGTTGCTCCCTCTGTGC +
Preference number: 6 (lower is better)
Translates to: RSAECLPERETL*PTGEGRLLPLC
Trigger: GCACAGAGGGAGCAACCTGCCCTCACCTGTGGGCAACAGTGTCTCCCGCTCTGGAAGACATTCTGCACTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS CAA 90 bp TCCTCCAGTTCACCTGGCTCTGGCATCGGCAGCTTCAAAGGCACGTaGTGCGCCCTGAAATCGGTCTGCTGCGAATCCATGCTCCCTGCG +
Preference number: 6 (lower is better)
Translates to: SSSSPGSGIGSFKGT*CALKSVCCESMLPA
Trigger: CGCAGGGAGCATGGATTCGCAGCAGACCGATTTCAGGGCGCACAACGTGCCTTTGAAGCTGCCGATGCCAGAGCCAGGTGAACTGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS TCA 72 bp CTGGCATCGGCAGCTTCAAAGGCACGTTGTGCGCCCTaGAATCGGTCTGCTGCGAATCCATGCTCCCTGCGT +
Preference number: 6 (lower is better)
Translates to: LASAASKARCAP*NRSAANPCSLR
Trigger: ACGCAGGGAGCATGGATTCGCAGCAGACCGATTTCAGGGCGCACAACGTGCCTTTGAAGCTGCCGATGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS GCA 72 bp TTCAAAGGCACGTTGTGCGCCCTGAAATCGGTCTGCTaGGAATCCATGCTCCCTGCGTTGCCCATGTCGGCG +
Preference number: 6 (lower is better)
Translates to: FKGTLCALKSVC*ESMLPALPMSA
Trigger: CGCCGACATGGGCAACGCAGGGAGCATGGATTCGCAGCAGACCGATTTCAGGGCGCACAACGTGCCTTTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS GCA 72 bp GCAGTGCAGAATGTCTTCCAGAGCGGGAGACACTGTTaGCCACAGGTGAGGGCAGGTTGCTCCCTCTGTGCA +
Preference number: 6 (lower is better)
Translates to: AVQNVFQSGRHC*PQVRAGCSLCA
Trigger: TGCACAGAGGGAGCAACCTGCCCTCACCTGTGGGCAACAGTGTCTCCCGCTCTGGAAGACATTCTGCACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS CCA 72 bp CACGATGGCAAATCGCTCCTCCAGTTCACCTGGCTCTaGCATCGGCAGCTTCAAAGGCACGTTGTGCGCCCT +
Preference number: 6 (lower is better)
Translates to: HDGKSLLQFTWL*HRQLQRHVVRP
Trigger: AGGGCGCACAACGTGCCTTTGAAGCTGCCGATGCCAGAGCCAGGTGAACTGGAGGAGCGATTTGCCATCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS GCA 72 bp AGCTTCAAAGGCACGTTGTGCGCCCTGAAATCGGTCTaGTGCGAATCCATGCTCCCTGCGTTGCCCATGTCG +
Preference number: 6 (lower is better)
Translates to: SFKGTLCALKSV*CESMLPALPMS
Trigger: CGACATGGGCAACGCAGGGAGCATGGATTCGCAGCAGACCGATTTCAGGGCGCACAACGTGCCTTTGAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS CAA 72 bp TCACCTGGCTCTGGCATCGGCAGCTTCAAAGGCACGTaGTGCGCCCTGAAATCGGTCTGCTGCGAATCCATG +
Preference number: 6 (lower is better)
Translates to: SPGSGIGSFKGT*CALKSVCCESM
Trigger: CATGGATTCGCAGCAGACCGATTTCAGGGCGCACAACGTGCCTTTGAAGCTGCCGATGCCAGAGCCAGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS CAA 90 bp GTATTATATCGCAGTGCAGAATGTCTTCCAGAGCGGGAGACACTGTaGCCCACAGGTGAGGGCAGGTTGCTCCCTCTGTGCAGGTCCTCG +
Preference number: 6 (lower is better)
Translates to: VLYRSAECLPERETL*PTGEGRLLPLCRSS
Trigger: CGAGGACCTGCACAGAGGGAGCAACCTGCCCTCACCTGTGGGCAACAGTGTCTCCCGCTCTGGAAGACATTCTGCACTGCGATATAATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS GCA 72 bp GGCGGCGGTGGCATAGGTGGTGTTACTGGACCATTTTaGACTGTTTCAGGTGTGTCTGATGAGGGAGGCAGT +
Preference number: 6 (lower is better)
Translates to: GGGGIGGVTGPF*TVSGVSDEGGS
Trigger: ACTGCCTCCCTCATCAGACACACCTGAAACAGTGCAAAATGGTCCAGTAACACCACCTATGCCACCGCCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS CCA 72 bp ATTCAGCACGATGGCAAATCGCTCCTCCAGTTCACCTaGCTCTGGCATCGGCAGCTTCAAAGGCACGTTGTG +
Preference number: 6 (lower is better)
Translates to: IQHDGKSLLQFT*LWHRQLQRHVV
Trigger: CACAACGTGCCTTTGAAGCTGCCGATGCCAGAGCCAGGTGAACTGGAGGAGCGATTTGCCATCGTGCTGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS TCA 72 bp GGAACAATCAGACAACAGTCCTTGCAGATGACACTTTaGCACTGGAGGAAGGTTGGCAAGAGGCGCGCAAGT +
Preference number: 6 (lower is better)
Translates to: GTIRQQSLQMTL*HWRKVGKRRAS
Trigger: ACTTGCGCGCCTCTTGCCAACCTTCCTCCAGTGTCAAAGTGTCATCTGCAAGGACTGTTGTCTGATTGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497192.1
CDS TCA 72 bp GACCCTCAGGAACAATCAGACAACAGTCCTTGCAGATaGCACTTTGACACTGGAGGAAGGTTGGCAAGAGGC +
Preference number: 6 (lower is better)
Translates to: DPQEQSDNSPCR*HFDTGGRLARG
Trigger: GCCTCTTGCCAACCTTCCTCCAGTGTCAAAGTGTCATCTGCAAGGACTGTTGTCTGATTGTTCCTGAGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497192.1
CDS CAA 72 bp AGGAACAATCAGACAACAGTCCTTGCAGATGACACTTaGACACTGGAGGAAGGTTGGCAAGAGGCGCGCAAG +
Preference number: 6 (lower is better)
Translates to: RNNQTTVLADDT*TLEEGWQEARK
Trigger: CTTGCGCGCCTCTTGCCAACCTTCCTCCAGTGTCAAAGTGTCATCTGCAAGGACTGTTGTCTGATTGTTCCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497192.1
CDS CAA 90 bp AACTCCTTCAGCAGCGTGTTATGGTCATGCATGGTGTACTCTCTCTaGGTCAAGTCCATTCCCCTCTGGAGCTCCTTGACATCCAGCAAA +
Preference number: 6 (lower is better)
Translates to: NSFSSVLWSCMVYSL*VKSIPLWSSLTSSK
Trigger: TTTGCTGGATGTCAAGGAGCTCCAGAGGGGAATGGACTTGACCAAGAGAGAGTACACCATGCATGACCATAACACGCTGCTGAAGGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS GCA 72 bp GGAGACTTTGGATCCTGCTGCTCCATCAGAGCTTCTTaGTCTAGGAGTTTTTCCATGAGAGCTTGTTCCTGC +
Preference number: 6 (lower is better)
Translates to: GDFGSCCSIRAS*SRSFSMRACSC
Trigger: GCAGGAACAAGCTCTCATGGAAAAACTCCTAGAGCAAGAAGCTCTGATGGAGCAGCAGGATCCAAAGTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS GCA 72 bp TTGAGGATGAACTCCTTCAGCAGCGTGTTATGGTCATaGATGGTGTACTCTCTCTTGGTCAAGTCCATTCCC +
Preference number: 6 (lower is better)
Translates to: LRMNSFSSVLWS*MVYSLLVKSIP
Trigger: GGGAATGGACTTGACCAAGAGAGAGTACACCATGCATGACCATAACACGCTGCTGAAGGAGTTCATCCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS CCA 72 bp ATGGTGTACTCTCTCTTGGTCAAGTCCATTCCCCTCTaGAGCTCCTTGACATCCAGCAAAACATTCTCAAGG +
Preference number: 6 (lower is better)
Translates to: MVYSLLVKSIPL*SSLTSSKTFSR
Trigger: CCTTGAGAATGTTTTGCTGGATGTCAAGGAGCTCCAGAGGGGAATGGACTTGACCAAGAGAGAGTACACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS CAA 72 bp GAGAAAAGCTTGATTGGCCCATCTGCTAATCCTGAGTaGAAAACCACTGTGGGTGAAGATGTTCCAGGCAGC +
Preference number: 6 (lower is better)
Translates to: EKSLIGPSANPE*KTTVGEDVPGS
Trigger: GCTGCCTGGAACATCTTCACCCACAGTGGTTTTCAACTCAGGATTAGCAGATGGGCCAATCAAGCTTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475377.2
CDS CCA 72 bp TCATTGTTGAGGATGAACTCCTTCAGCAGCGTGTTATaGTCATGCATGGTGTACTCTCTCTTGGTCAAGTCC +
Preference number: 6 (lower is better)
Translates to: SLLRMNSFSSVL*SCMVYSLLVKS
Trigger: GGACTTGACCAAGAGAGAGTACACCATGCATGACCATAACACGCTGCTGAAGGAGTTCATCCTCAACAATGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS CAA 72 bp GACGCTTCTCCTCACCGCATCGGCTCGTCTGTATGGTaGGTTTCTAAGATCTGTGATAATATCTTCAATGGC +
Preference number: 6 (lower is better)
Translates to: DASPHRIGSSVW*VSKICDNIFNG
Trigger: GCCATTGAAGATATTATCACAGATCTTAGAAACCAACCATACAGACGAGCCGATGCGGTGAGGAGAAGCGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS CCA 72 bp CCTGACGCTTCTCCTCACCGCATCGGCTCGTCTGTATaGTTGGTTTCTAAGATCTGTGATAATATCTTCAAT +
Preference number: 6 (lower is better)
Translates to: PDASPHRIGSSV*LVSKICDNIFN
Trigger: ATTGAAGATATTATCACAGATCTTAGAAACCAACCATACAGACGAGCCGATGCGGTGAGGAGAAGCGTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS GCA 72 bp GCAAAGTTCCCAATGAAGGCCATGATGGTCATCTTCTaGATGAGCCTCTCGATTTTACTAAACTGCATCATG +
Preference number: 6 (lower is better)
Translates to: AKFPMKAMMVIF*MSLSILLNCIM
Trigger: CATGATGCAGTTTAGTAAAATCGAGAGGCTCATGCAGAAGATGACCATCATGGCCTTCATTGGGAACTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS CAA 72 bp GTCACTTTGTTTGATCCCTTCTGTGGTATCTTCTGTTaGCTTGAAGAAAGATCAATGGCAGGTCCTTGGGCT +
Preference number: 6 (lower is better)
Translates to: VTLFDPFCGIFC*LEERSMAGPWA
Trigger: AGCCCAAGGACCTGCCATTGATCTTTCTTCAAGCAAACAGAAGATACCACAGAAGGGATCAAACAAAGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288670.14
ENST00000475377.2
ENST00000497192.1
CDS TCA 72 bp TCATCATCAATTTCATTGAAGACTGTGCCATTGATCTaGTTGGGCTTCAGAGCAACCCAGTTAAACACTGGC +
Preference number: 6 (lower is better)
Translates to: SSSISLKTVPLI*LGFRATQLNTG
Trigger: GCCAGTGTTTAACTGGGTTGCTCTGAAGCCCAATCAGATCAATGGCACAGTCTTCAATGAAATTGATGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288670.14
ENST00000475377.2
ENST00000497192.1
CDS TCA 72 bp GATTTTACTAAACTGCATCATGAACCGATCTTCATCTaGCAAGTTTTCCAGAGGCTTCCTTTCCCGCTCGTA +
Preference number: 6 (lower is better)
Translates to: DFTKLHHEPIFI*QVFQRLPFPLV
Trigger: TACGAGCGGGAAAGGAAGCCTCTGGAAAACTTGTCAGATGAAGATCGGTTCATGATGCAGTTTAGTAAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS GCA 72 bp TCACTTTGTTTGATCCCTTCTGTGGTATCTTCTGTTTaGTTGAAGAAAGATCAATGGCAGGTCCTTGGGCTT +
Preference number: 6 (lower is better)
Translates to: SLCLIPSVVSSV*LKKDQWQVLGL
Trigger: AAGCCCAAGGACCTGCCATTGATCTTTCTTCAAGCAAACAGAAGATACCACAGAAGGGATCAAACAAAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288670.14
ENST00000475377.2
ENST00000497192.1
CDS CCA 72 bp TTGAACACGCCGTCTGAATTTCTTCCTGGTTACAGCTaGATCCAGATAGCCTTTGAGCTTTTGAATGTATGT +
Preference number: 6 (lower is better)
Translates to: LNTPSEFLPGYS*IQIAFELLNVC
Trigger: ACATACATTCAAAAGCTCAAAGGCTATCTGGATCCAGCTGTAACCAGGAAGAAATTCAGACGGCGTGTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS CCA 72 bp GATCTGATTGGGCTTCAGAGCAACCCAGTTAAACACTaGCATTCTGAACTTCGTCTTGATTGGCTTCTTAAT +
Preference number: 6 (lower is better)
Translates to: DLIGLQSNPVKH*HSELRLDWLLN
Trigger: ATTAAGAAGCCAATCAAGACGAAGTTCAGAATGCCAGTGTTTAACTGGGTTGCTCTGAAGCCCAATCAGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288670.14
ENST00000475377.2
ENST00000497192.1
CDS CAA 90 bp GGCTTCAGAGCAACCCAGTTAAACACTGGCATTCTGAACTTCGTCTaGATTGGCTTCTTAATTTTCACAGCTGCTAATCCTGAGTTGAAA +
Preference number: 6 (lower is better)
Translates to: GFRATQLNTGILNFV*IGFLIFTAANPELK
Trigger: TTTCAACTCAGGATTAGCAGCTGTGAAAATTAAGAAGCCAATCAAGACGAAGTTCAGAATGCCAGTGTTTAACTGGGTTGCTCTGAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS TCA 72 bp GAAATTTCCAGTTCTCTTAGCACTTGTGTAGATTCTTaGACACGCCGTCTGAATTTCTTCCTGGTTACAGCT +
Preference number: 6 (lower is better)
Translates to: EISSSLSTCVDS*TRRLNFFLVTA
Trigger: AGCTGTAACCAGGAAGAAATTCAGACGGCGTGTTCAAGAATCTACACAAGTGCTAAGAGAACTGGAAATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS GCA 72 bp GTCATCTTCTGCATGAGCCTCTCGATTTTACTAAACTaGATCATGAACCGATCTTCATCTGACAAGTTTTCC +
Preference number: 6 (lower is better)
Translates to: VIFCMSLSILLN*IMNRSSSDKFS
Trigger: GGAAAACTTGTCAGATGAAGATCGGTTCATGATGCAGTTTAGTAAAATCGAGAGGCTCATGCAGAAGATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS CAA 72 bp GCAACCCAGTTAAACACTGGCATTCTGAACTTCGTCTaGATTGGCTTCTTAATTTTCACAGCTGCTAATCCT +
Preference number: 6 (lower is better)
Translates to: ATQLNTGILNFV*IGFLIFTAANP
Trigger: AGGATTAGCAGCTGTGAAAATTAAGAAGCCAATCAAGACGAAGTTCAGAATGCCAGTGTTTAACTGGGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288670.14
CDS CAA 90 bp TCTAGTAATGTCACTTTGTTTGATCCCTTCTGTGGTATCTTCTGTTaGCTTGAAGAAAGATCAATGGCAGGTCCTTGGGCTTTTGTCTTG +
Preference number: 6 (lower is better)
Translates to: SSNVTLFDPFCGIFC*LEERSMAGPWAFVL
Trigger: CAAGACAAAAGCCCAAGGACCTGCCATTGATCTTTCTTCAAGCAAACAGAAGATACCACAGAAGGGATCAAACAAAGTGACATTACTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288670.14
ENST00000475377.2
ENST00000497192.1
CDS GCA 72 bp TCTTTAAAGTTATCAAATGCTGATAAAATGATTTCATaGCCGCCTCTGACAAGACAAACGGCTGCCAACAGT +
Preference number: 6 (lower is better)
Translates to: SLKLSNADKMIS*PPLTRQTAANS
Trigger: ACTGTTGGCAGCCGTTTGTCTTGTCAGAGGCGGGCATGAAATCATTTTATCAGCATTTGATAACTTTAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000492942.1
CDS CAA 90 bp GTTATGGCAAGATTTTTGGCCCTGTTTGCTTCTAGTAATGTCACTTaGTTTGATCCCTTCTGTGGTATCTTCTGTTTGCTTGAAGAAAGA +
Preference number: 6 (lower is better)
Translates to: VMARFLALFASSNVT*FDPFCGIFCLLEER
Trigger: TCTTTCTTCAAGCAAACAGAAGATACCACAGAAGGGATCAAACAAAGTGACATTACTAGAAGCAAACAGGGCCAAAAATCTTGCCATAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288670.14
ENST00000475377.2
ENST00000497192.1
CDS CAA 90 bp TCTTTCCAGCTTTCCTTAAAGTTATGGCAAGATTTTTGGCCCTGTTaGCTTCTAGTAATGTCACTTTGTTTGATCCCTTCTGTGGTATCT +
Preference number: 6 (lower is better)
Translates to: SFQLSLKLWQDFWPC*LLVMSLCLIPSVVS
Trigger: AGATACCACAGAAGGGATCAAACAAAGTGACATTACTAGAAGCAAACAGGGCCAAAAATCTTGCCATAACTTTAAGGAAAGCTGGAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288670.14
ENST00000475377.2
ENST00000497192.1
CDS CCA 72 bp TTTCATCAGCAGTCTTTCCAGCTTTCCTTAAAGTTATaGCAAGATTTTTGGCCCTGTTTGCTTCTAGTAATG +
Preference number: 6 (lower is better)
Translates to: FHQQSFQLSLKL*QDFWPCLLLVM
Trigger: CATTACTAGAAGCAAACAGGGCCAAAAATCTTGCCATAACTTTAAGGAAAGCTGGAAAGACTGCTGATGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288670.14
ENST00000475377.2
CDS CAA 72 bp AGATTTTTGGCCCTGTTTGCTTCTAGTAATGTCACTTaGTTTGATCCCTTCTGTGGTATCTTCTGTTTGCTT +
Preference number: 6 (lower is better)
Translates to: RFLALFASSNVT*FDPFCGIFCLL
Trigger: AAGCAAACAGAAGATACCACAGAAGGGATCAAACAAAGTGACATTACTAGAAGCAAACAGGGCCAAAAATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288670.14
ENST00000475377.2
ENST00000497192.1
CDS CAA 72 bp CTTTCCTTAAAGTTATGGCAAGATTTTTGGCCCTGTTaGCTTCTAGTAATGTCACTTTGTTTGATCCCTTCT +
Preference number: 6 (lower is better)
Translates to: LSLKLWQDFWPC*LLVMSLCLIPS
Trigger: AGAAGGGATCAAACAAAGTGACATTACTAGAAGCAAACAGGGCCAAAAATCTTGCCATAACTTTAAGGAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288670.14
ENST00000475377.2
ENST00000497192.1
CDS CAA 72 bp TACTCACTAATCTTGAATTTTTCAGAGTTCTTCTGCTaGGCAATGTATTATATCGCAGTGCAGAATGTCTTC +
Preference number: 6 (lower is better)
Translates to: YSLILNFSEFFC*AMYYIAVQNVF
Trigger: GAAGACATTCTGCACTGCGATATAATACATTGCCAAGCAGAAGAACTCTGAAAAATTCAAGATTAGTGAGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288670.14