Pregenerated sensors for FMNL1-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000267121Ensembl transcript IDs: ENST00000585471.1, ENST00000586376.5, ENST00000590495.1, ENST00000590522.1, ENST00000591365.1, ENST00000670229.1
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CAGTCCGGGACGCGAGACGGGAACGCAGCCCTGGCGCCCCAACGCTaGACCACCGTGGGTCTCCGAGCCGTGCTCGCAGTCGCTGAGATC | + |
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Preference number: 5 (lower is better) Translates to: QSGTRDGNAALAPQR*TTVGLRAVLAVAEI Trigger: GATCTCAGCGACTGCGAGCACGGCTCGGAGACCCACGGTGGTGCAGCGTTGGGGCGCCAGGGCTGCGTTCCCGTCTCGCGTCCCGGACTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000586376.5 ENST00000590495.1 ENST00000591365.1 |
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| CDS GCA 90 bp | CAGCCCTGGCGCCCCAACGCTGCACCACCGTGGGTCTCCGAGCCGTaGTCGCAGTCGCTGAGATCCTCGGTGCGGAGAAGATGTGCCCCT | + |
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Preference number: 5 (lower is better) Translates to: QPWRPNAAPPWVSEP*SQSLRSSVRRRCAP Trigger: AGGGGCACATCTTCTCCGCACCGAGGATCTCAGCGACTGCGAGCACGGCTCGGAGACCCACGGTGGTGCAGCGTTGGGGCGCCAGGGCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000586376.5 ENST00000590495.1 ENST00000591365.1 |
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| CDS TCA 90 bp | CCAACGCTGCACCACCGTGGGTCTCCGAGCCGTGCTCGCAGTCGCTaGGATCCTCGGTGCGGAGAAGATGTGCCCCTCCAATCCCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: PTLHHRGSPSRARSR*DPRCGEDVPLQSPG Trigger: GCCTGGGGATTGGAGGGGCACATCTTCTCCGCACCGAGGATCTCAGCGACTGCGAGCACGGCTCGGAGACCCACGGTGGTGCAGCGTTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000586376.5 ENST00000590495.1 ENST00000591365.1 |
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| CDS GCA 90 bp | CGAGCCGTGCTCGCAGTCGCTGAGATCCTCGGTGCGGAGAAGATGTaGCCCTCCAATCCCCAGGCCGTGATCCCCTTCACCCAGACCCGG | + |
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Preference number: 5 (lower is better) Translates to: RAVLAVAEILGAEKM*PSNPQAVIPFTQTR Trigger: CCGGGTCTGGGTGAAGGGGATCACGGCCTGGGGATTGGAGGGGCACATCTTCTCCGCACCGAGGATCTCAGCGACTGCGAGCACGGCTCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000586376.5 ENST00000590495.1 ENST00000591365.1 |
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| CDS CCA 90 bp | GCTGCGGTGAATCCATCCATCGCCCCTCGAAGCCTTGCCCTATCTTaGCTGTCATACCGTCTACGGCCAGCAGGGGGTAGCACAGATCCA | + |
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Preference number: 5 (lower is better) Translates to: AAVNPSIAPRSLALS*LSYRLRPAGGSTDP Trigger: TGGATCTGTGCTACCCCCTGCTGGCCGTAGACGGTATGACAGCCAAGATAGGGCAAGGCTTCGAGGGGCGATGGATGGATTCACCGCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000585471.1 ENST00000670229.1 |
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| CDS TCA 90 bp | GACTGCACTGAAGGTGACAACAGTCCAGAAATGTCGCCGCTGCGGTaGATCCATCCATCGCCCCTCGAAGCCTTGCCCTATCTTGGCTGT | + |
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Preference number: 5 (lower is better) Translates to: DCTEGDNSPEMSPLR*IHPSPLEALPYLGC Trigger: ACAGCCAAGATAGGGCAAGGCTTCGAGGGGCGATGGATGGATTCACCGCAGCGGCGACATTTCTGGACTGTTGTCACCTTCAGTGCAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000585471.1 ENST00000670229.1 |
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| CDS TCA 90 bp | TTCCACATGAGGCCTTGGAGGTCCTTGGTCAGGCCACGAAACCAGTaGTCACATCTCTCACCCATCTGGGGTGCTGGTGACCTTGGCAGA | + |
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Preference number: 5 (lower is better) Translates to: FHMRPWRSLVRPRNQ*SHLSPIWGAGDLGR Trigger: TCTGCCAAGGTCACCAGCACCCCAGATGGGTGAGAGATGTGATCACTGGTTTCGTGGCCTGACCAAGGACCTCCAAGGCCTCATGTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586376.5 |
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| CDS GCA 90 bp | TGGCTTGAGAAGCCCCCAGGATTGAAGATACAGTCTGATAACTACTaGATTCGTGGCTCCCCGCCTGGCTTGGGTTTCCAGCTGCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: WLEKPPGLKIQSDNY*IRGSPPGLGFQLQG Trigger: GCCCTGCAGCTGGAAACCCAAGCCAGGCGGGGAGCCACGAATGCAGTAGTTATCAGACTGTATCTTCAATCCTGGGGGCTTCTCAAGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000591365.1 ENST00000670229.1 |
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| CDS GCA 90 bp | CCAGTGACTGCACTGAAGGTGACAACAGTCCAGAAATGTCGCCGCTaGGGTGAATCCATCCATCGCCCCTCGAAGCCTTGCCCTATCTTG | + |
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Preference number: 5 (lower is better) Translates to: PVTALKVTTVQKCRR*GESIHRPSKPCPIL Trigger: CAAGATAGGGCAAGGCTTCGAGGGGCGATGGATGGATTCACCGCAGCGGCGACATTTCTGGACTGTTGTCACCTTCAGTGCAGTCACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000585471.1 ENST00000670229.1 |
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| CDS TCA 90 bp | GCCACGAAACCAGTGATCACATCTCTCACCCATCTGGGGTGCTGGTaGCCTTGGCAGAAGAAAGGCTTAAACCAGGTCAGCCTGGGGGAA | + |
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Preference number: 5 (lower is better) Translates to: ATKPVITSLTHLGCW*PWQKKGLNQVSLGE Trigger: TTCCCCCAGGCTGACCTGGTTTAAGCCTTTCTTCTGCCAAGGTCACCAGCACCCCAGATGGGTGAGAGATGTGATCACTGGTTTCGTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000585471.1 ENST00000586376.5 ENST00000590495.1 ENST00000591365.1 ENST00000670229.1 |
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| CDS TCA 90 bp | TCTGCCACAGAATCTTGGAGGTCCTTGGTCAGGCCACGAAACCAGTaGTCACATCTCTCACCCATCTGGGGTGCTGGTGACCTTGGCAGA | + |
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Preference number: 5 (lower is better) Translates to: SATESWRSLVRPRNQ*SHLSPIWGAGDLGR Trigger: TCTGCCAAGGTCACCAGCACCCCAGATGGGTGAGAGATGTGATCACTGGTTTCGTGGCCTGACCAAGGACCTCCAAGATTCTGTGGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000591365.1 ENST00000670229.1 |
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| CDS TCA 90 bp | GGAAAGATACCTCCTTGGAGGTCCTTGGTCAGGCCACGAAACCAGTaGTCACATCTCTCACCCATCTGGGGTGCTGGTGACCTTGGCAGA | + |
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Preference number: 5 (lower is better) Translates to: GKIPPWRSLVRPRNQ*SHLSPIWGAGDLGR Trigger: TCTGCCAAGGTCACCAGCACCCCAGATGGGTGAGAGATGTGATCACTGGTTTCGTGGCCTGACCAAGGACCTCCAAGGAGGTATCTTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585471.1 |
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| CDS GCA 90 bp | TCCCTGGCGGTGACAGTGTCAAGATTCTTTTTCCCTCCTCTGCGGTaGCCACTCCTTTTCCAGCCTTGTGGCTGGCTCTCATCCTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: SLAVTVSRFFFPPLR*PLLFQPCGWLSSSF Trigger: AAAGGAGGATGAGAGCCAGCCACAAGGCTGGAAAAGGAGTGGGCACCGCAGAGGAGGGAAAAAGAATCTTGACACTGTCACCGCCAGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000591365.1 ENST00000670229.1 |
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| CDS CCA 90 bp | TTGGCAGAAGAAAGGCTTAAACCAGGTCAGCCTGGGGGAAGGGGCTaGCTCCTTCCAGGGTCTTCCTCCAGATTAGATGTTAACTCTCCG | + |
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Preference number: 5 (lower is better) Translates to: LAEERLKPGQPGGRG*LLPGSSSRLDVNSP Trigger: CGGAGAGTTAACATCTAATCTGGAGGAAGACCCTGGAAGGAGCCAGCCCCTTCCCCCAGGCTGACCTGGTTTAAGCCTTTCTTCTGCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000586376.5 ENST00000590495.1 ENST00000591365.1 ENST00000670229.1 |
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| CDS GCA 90 bp | GCAGCCACTCTCCTAGAGAGGTTAAAAGTCTGTCCCTCGCTAGGCTaGAAGCAGCCCAAGGACCAAGGCATTTCTCATCTGCCACAGAAT | + |
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Preference number: 5 (lower is better) Translates to: AATLLERLKVCPSLG*KQPKDQGISHLPQN Trigger: ATTCTGTGGCAGATGAGAAATGCCTTGGTCCTTGGGCTGCTTGCAGCCTAGCGAGGGACAGACTTTTAACCTCTCTAGGAGAGTGGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000591365.1 ENST00000670229.1 |
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| CDS TCA 90 bp | TTCTGGGCAAGAGGAAGCATGAACAGCTGGTCCCATAGGATGACTTaGAGCAGCCACTCTCCTAGAGAGGTTAAAAGTCTGTCCCTCGCT | + |
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Preference number: 5 (lower is better) Translates to: FWARGSMNSWSHRMT*SSHSPREVKSLSLA Trigger: AGCGAGGGACAGACTTTTAACCTCTCTAGGAGAGTGGCTGCTTCAAGTCATCCTATGGGACCAGCTGTTCATGCTTCCTCTTGCCCAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000591365.1 ENST00000670229.1 |
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| CDS TCA 90 bp | TTAAAGTCTTGTCAGTGGCTCTTCTCTGGCCATTGTCAGGATGAATaGAAGAGCTCTGAAAGTATTTCTTCTCAGTCCGGGACGCGAGAC | + |
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Preference number: 5 (lower is better) Translates to: LKSCQWLFSGHCQDE*KSSESISSQSGTRD Trigger: GTCTCGCGTCCCGGACTGAGAAGAAATACTTTCAGAGCTCTTTCATTCATCCTGACAATGGCCAGAGAAGAGCCACTGACAAGACTTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590495.1 |
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| CDS TCA 90 bp | GGAGAGAAGAGATCCCTGGGAAAACCTTATCAATCACCTGGGTTCTaGATATTCCCAGTGACTGCACTGAAGGTGACAACAGTCCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: GEKRSLGKPYQSPGF*IFPVTALKVTTVQK Trigger: TTTCTGGACTGTTGTCACCTTCAGTGCAGTCACTGGGAATATTCAGAACCCAGGTGATTGATAAGGTTTTCCCAGGGATCTCTTCTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000585471.1 ENST00000670229.1 |
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| CDS CCA 90 bp | GTTAGTCCCAAGCTTCAGTCATCCCTTCTAGGATTTCCTCCTCTGTaGGCCAAGATGGGAAAGATACCTCCTGCCAAGCAAATGAAATTT | + |
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Preference number: 5 (lower is better) Translates to: VSPKLQSSLLGFPPL*AKMGKIPPAKQMKF Trigger: AAATTTCATTTGCTTGGCAGGAGGTATCTTTCCCATCTTGGCCCACAGAGGAGGAAATCCTAGAAGGGATGACTGAAGCTTGGGACTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670229.1 |
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| CDS TCA 72 bp | CCCGGCCCAGCCCTCTGGCCCCGGCGGCCTGCAGCCTaGCTTCCTCCCCCAACCCTGCAGCTCGCCGCCCGG | + |
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Preference number: 6 (lower is better) Translates to: PGPALWPRRPAA*LPPPTLQLAAR Trigger: CCGGGCGGCGAGCTGCAGGGTTGGGGGAGGAAGTCAGGCTGCAGGCCGCCGGGGCCAGAGGGCTGGGCCGGG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000591365.1 |
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| CDS GCA 72 bp | ACCCGGCCAATCCCTCGCCCGAGGCGAGCGGGAGGATaGGGTTCTAGGACCCGGAGGCGCCGCCGAGCGCGC | + |
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Preference number: 6 (lower is better) Translates to: TRPIPRPRRAGG*GSRTRRRRRAR Trigger: GCGCGCTCGGCGGCGCCTCCGGGTCCTAGAACCGCATCCTCCCGCTCGCCTCGGGCGAGGGATTGGCCGGGT 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000586376.5 ENST00000590495.1 ENST00000591365.1 |
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| CDS CCA 72 bp | CCGGGCCGGGAGCCTCGTCCCCGTCCCCCGGAAAGCTaGATTTCCGAGGCTGGAGGCGCCTGGCCGGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: PGREPRPRPPES*ISEAGGAWPAG Trigger: CCCAGCCGGCCAGGCGCCTCCAGCCTCGGAAATCCAGCTTTCCGGGGGACGGGGACGAGGCTCCCGGCCCGG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000591365.1 |
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| CDS CCA 72 bp | CCTGCACAGGCGCACGGTTGGTCGAGGTGGGACAGGTaGCGGGGGTCTCCACTGGCCTGCGTCCGCGCCCCC | + |
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Preference number: 6 (lower is better) Translates to: PAQAHGWSRWDR*RGSPLACVRAP Trigger: GGGGGCGCGGACGCAGGCCAGTGGAGACCCCCGCCACCTGTCCCACCTCGACCAACCGTGCGCCTGTGCAGG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000591365.1 ENST00000670229.1 |
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| CDS GCA 72 bp | ACGCGAGACGGGAACGCAGCCCTGGCGCCCCAACGCTaGACCACCGTGGGTCTCCGAGCCGTGCTCGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: TRDGNAALAPQR*TTVGLRAVLAV Trigger: GACTGCGAGCACGGCTCGGAGACCCACGGTGGTGCAGCGTTGGGGCGCCAGGGCTGCGTTCCCGTCTCGCGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000586376.5 ENST00000590495.1 ENST00000591365.1 |
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| CDS CCA 72 bp | CCCCCGGAAAGCTGGATTTCCGAGGCTGGAGGCGCCTaGCCGGCTGGGTGGGGACCACCATGGGCAACGCGG | + |
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Preference number: 6 (lower is better) Translates to: PPESWISEAGGA*PAGWGPPWATR Trigger: CCGCGTTGCCCATGGTGGTCCCCACCCAGCCGGCCAGGCGCCTCCAGCCTCGGAAATCCAGCTTTCCGGGGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000591365.1 |
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| CDS CCA 72 bp | GGAACGCAGCCCTGGCGCCCCAACGCTGCACCACCGTaGGTCTCCGAGCCGTGCTCGCAGTCGCTGAGATCC | + |
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Preference number: 6 (lower is better) Translates to: GTQPWRPNAAPP*VSEPCSQSLRS Trigger: GGATCTCAGCGACTGCGAGCACGGCTCGGAGACCCACGGTGGTGCAGCGTTGGGGCGCCAGGGCTGCGTTCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000586376.5 ENST00000590495.1 ENST00000591365.1 |
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| CDS CCA 72 bp | CTTCTCAGTCCGGGACGCGAGACGGGAACGCAGCCCTaGCGCCCCAACGCTGCACCACCGTGGGTCTCCGAG | + |
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Preference number: 6 (lower is better) Translates to: LLSPGRETGTQP*RPNAAPPWVSE Trigger: CTCGGAGACCCACGGTGGTGCAGCGTTGGGGCGCCAGGGCTGCGTTCCCGTCTCGCGTCCCGGACTGAGAAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000586376.5 ENST00000590495.1 ENST00000591365.1 |
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| CDS CAA 72 bp | GCTGGGTGCCCGGCGGCGGCGGCGGCGAACTGCGGTTaGCGCGCACGGGGAGCGACAGCAGAAGTTCGAAAA | + |
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Preference number: 6 (lower is better) Translates to: AGCPAAAAANCG*RARGATAEVRK Trigger: TTTTCGAACTTCTGCTGTCGCTCCCCGTGCGCGCAAACCGCAGTTCGCCGCCGCCGCCGCCGGGCACCCAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591365.1 |
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| CDS GCA 72 bp | CGCCCCAACGCTGCACCACCGTGGGTCTCCGAGCCGTaGTCGCAGTCGCTGAGATCCTCGGTGCGGAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: RPNAAPPWVSEP*SQSLRSSVRRR Trigger: TCTTCTCCGCACCGAGGATCTCAGCGACTGCGAGCACGGCTCGGAGACCCACGGTGGTGCAGCGTTGGGGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000586376.5 ENST00000590495.1 ENST00000591365.1 |
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| CDS TCA 72 bp | CACCACCGTGGGTCTCCGAGCCGTGCTCGCAGTCGCTaGGATCCTCGGTGCGGAGAAGATGTGCCCCTCCAA | + |
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Preference number: 6 (lower is better) Translates to: HHRGSPSRARSR*DPRCGEDVPLQ Trigger: TTGGAGGGGCACATCTTCTCCGCACCGAGGATCTCAGCGACTGCGAGCACGGCTCGGAGACCCACGGTGGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000586376.5 ENST00000590495.1 ENST00000591365.1 |
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| CDS GCA 72 bp | CTCGCAGTCGCTGAGATCCTCGGTGCGGAGAAGATGTaGCCCTCCAATCCCCAGGCCGTGATCCCCTTCACC | + |
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Preference number: 6 (lower is better) Translates to: LAVAEILGAEKM*PSNPQAVIPFT Trigger: GGTGAAGGGGATCACGGCCTGGGGATTGGAGGGGCACATCTTCTCCGCACCGAGGATCTCAGCGACTGCGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000586376.5 ENST00000590495.1 ENST00000591365.1 |
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| CDS GCA 72 bp | CGCTGCGGTGAATCCATCCATCGCCCCTCGAAGCCTTaGCCTATCTTGGCTGTCATACCGTCTACGGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: RCGESIHRPSKP*PILAVIPSTAS Trigger: GCTGGCCGTAGACGGTATGACAGCCAAGATAGGGCAAGGCTTCGAGGGGCGATGGATGGATTCACCGCAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000585471.1 ENST00000670229.1 |
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| CDS CCA 72 bp | CTGATAACTACTGCATTCGTGGCTCCCCGCCTGGCTTaGGTTTCCAGCTGCAGGGCACGCTCCTACCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LITTAFVAPRLA*VSSCRARSYPS Trigger: AGAAGGGTAGGAGCGTGCCCTGCAGCTGGAAACCCAAGCCAGGCGGGGAGCCACGAATGCAGTAGTTATCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000591365.1 ENST00000670229.1 |
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| CDS CCA 72 bp | AATCCATCCATCGCCCCTCGAAGCCTTGCCCTATCTTaGCTGTCATACCGTCTACGGCCAGCAGGGGGTAGC | + |
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Preference number: 6 (lower is better) Translates to: NPSIAPRSLALS*LSYRLRPAGGS Trigger: GCTACCCCCTGCTGGCCGTAGACGGTATGACAGCCAAGATAGGGCAAGGCTTCGAGGGGCGATGGATGGATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000585471.1 ENST00000670229.1 |
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| CDS TCA 72 bp | CCTCCTTGGAGGTCCTTGGTCAGGCCACGAAACCAGTaGTCACATCTCTCACCCATCTGGGGTGCTGGTGAC | + |
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Preference number: 6 (lower is better) Translates to: PPWRSLVRPRNQ*SHLSPIWGAGD Trigger: GTCACCAGCACCCCAGATGGGTGAGAGATGTGATCACTGGTTTCGTGGCCTGACCAAGGACCTCCAAGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585471.1 |
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| CDS TCA 72 bp | AGGCCTTGGAGGTCCTTGGTCAGGCCACGAAACCAGTaGTCACATCTCTCACCCATCTGGGGTGCTGGTGAC | + |
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Preference number: 6 (lower is better) Translates to: RPWRSLVRPRNQ*SHLSPIWGAGD Trigger: GTCACCAGCACCCCAGATGGGTGAGAGATGTGATCACTGGTTTCGTGGCCTGACCAAGGACCTCCAAGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586376.5 |
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| CDS GCA 72 bp | GCACTGAAGGTGACAACAGTCCAGAAATGTCGCCGCTaGGGTGAATCCATCCATCGCCCCTCGAAGCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: ALKVTTVQKCRR*GESIHRPSKPC Trigger: GCAAGGCTTCGAGGGGCGATGGATGGATTCACCGCAGCGGCGACATTTCTGGACTGTTGTCACCTTCAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000585471.1 ENST00000670229.1 |
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| CDS TCA 72 bp | GAAGGTGACAACAGTCCAGAAATGTCGCCGCTGCGGTaGATCCATCCATCGCCCCTCGAAGCCTTGCCCTAT | + |
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Preference number: 6 (lower is better) Translates to: EGDNSPEMSPLR*IHPSPLEALPY Trigger: ATAGGGCAAGGCTTCGAGGGGCGATGGATGGATTCACCGCAGCGGCGACATTTCTGGACTGTTGTCACCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000585471.1 ENST00000670229.1 |
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| CDS TCA 72 bp | GAATCTTGGAGGTCCTTGGTCAGGCCACGAAACCAGTaGTCACATCTCTCACCCATCTGGGGTGCTGGTGAC | + |
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Preference number: 6 (lower is better) Translates to: ESWRSLVRPRNQ*SHLSPIWGAGD Trigger: GTCACCAGCACCCCAGATGGGTGAGAGATGTGATCACTGGTTTCGTGGCCTGACCAAGGACCTCCAAGATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000591365.1 ENST00000670229.1 |
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| CDS CCA 72 bp | CTGGGCAACAGCGAGAGACTCCATCTTGGAGGTCCTTaGTCAGGCCACGAAACCAGTGATCACATCTCTCAC | + |
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Preference number: 6 (lower is better) Translates to: LGNSERLHLGGP*SGHETSDHISH Trigger: GTGAGAGATGTGATCACTGGTTTCGTGGCCTGACCAAGGACCTCCAAGATGGAGTCTCTCGCTGTTGCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590522.1 |
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| CDS CAA 72 bp | GATCACATCTCTCACCCATCTGGGGTGCTGGTGACCTaGGCAGAAGAAAGGCTTAAACCAGGTCAGCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: DHISHPSGVLVT*AEERLKPGQPG Trigger: CCCAGGCTGACCTGGTTTAAGCCTTTCTTCTGCCAAGGTCACCAGCACCCCAGATGGGTGAGAGATGTGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000585471.1 ENST00000586376.5 ENST00000590495.1 ENST00000591365.1 ENST00000670229.1 |
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| CDS CAA 90 bp | CCTTGGGTGAAGAGTGGCTGGCAATGGCTTGAGAAGCCCCCAGGATaGAAGATACAGTCTGATAACTACTGCATTCGTGGCTCCCCGCCT | + |
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Preference number: 6 (lower is better) Translates to: PWVKSGWQWLEKPPG*KIQSDNYCIRGSPP Trigger: AGGCGGGGAGCCACGAATGCAGTAGTTATCAGACTGTATCTTCAATCCTGGGGGCTTCTCAAGCCATTGCCAGCCACTCTTCACCCAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000670229.1 |
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| CDS TCA 72 bp | CCAGTGATCACATCTCTCACCCATCTGGGGTGCTGGTaGCCTTGGCAGAAGAAAGGCTTAAACCAGGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: PVITSLTHLGCW*PWQKKGLNQVS Trigger: GCTGACCTGGTTTAAGCCTTTCTTCTGCCAAGGTCACCAGCACCCCAGATGGGTGAGAGATGTGATCACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000585471.1 ENST00000586376.5 ENST00000590495.1 ENST00000591365.1 ENST00000670229.1 |
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| CDS GCA 72 bp | AAGCCCCCAGGATTGAAGATACAGTCTGATAACTACTaGATTCGTGGCTCCCCGCCTGGCTTGGGTTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: KPPGLKIQSDNY*IRGSPPGLGFQ Trigger: CTGGAAACCCAAGCCAGGCGGGGAGCCACGAATGCAGTAGTTATCAGACTGTATCTTCAATCCTGGGGGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000591365.1 ENST00000670229.1 |
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| CDS CCA 72 bp | AGGTGTTACTTAGCCCAGCTTTATTCCACCAGGCCTTaGGTGAAGAGTGGCTGGCAATGGCTTGAGAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: RCYLAQLYSTRP*VKSGWQWLEKP Trigger: GGGCTTCTCAAGCCATTGCCAGCCACTCTTCACCCAAGGCCTGGTGGAATAAAGCTGGGCTAAGTAACACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670229.1 |
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| CDS GCA 72 bp | CTCCTAGAGAGGTTAAAAGTCTGTCCCTCGCTAGGCTaGAAGCAGCCCAAGGACCAAGGCATTTCTCATCTG | + |
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Preference number: 6 (lower is better) Translates to: LLERLKVCPSLG*KQPKDQGISHL Trigger: CAGATGAGAAATGCCTTGGTCCTTGGGCTGCTTGCAGCCTAGCGAGGGACAGACTTTTAACCTCTCTAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000591365.1 ENST00000670229.1 |
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| CDS GCA 72 bp | AGTGAGGAGGCTTGCTTCTGTCCTTTGTTAGCTGAGTaGCCTTGGACAGCTTACTTACCTACTCTCAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: SEEACFCPLLAE*PWTAYLPTLSL Trigger: GAGGCTGAGAGTAGGTAAGTAAGCTGTCCAAGGGCACTCAGCTAACAAAGGACAGAAGCAAGCCTCCTCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000591365.1 ENST00000670229.1 |
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| CDS TCA 72 bp | AGAGTGGCTGGCAATGGCTTGAGAAGCCCCCAGGATTaGAGATACAGTCTGATAACTACTGCATTCGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: RVAGNGLRSPQD*RYSLITTAFVA Trigger: AGCCACGAATGCAGTAGTTATCAGACTGTATCTTCAATCCTGGGGGCTTCTCAAGCCATTGCCAGCCACTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000591365.1 ENST00000670229.1 |
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| CDS CCA 72 bp | GAGGCTTGCTTCTGTCCTTTGTTAGCTGAGTGCCCTTaGACAGCTTACTTACCTACTCTCAGCCTCAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: EACFCPLLAECP*TAYLPTLSLSF Trigger: GAAACTGAGGCTGAGAGTAGGTAAGTAAGCTGTCCAAGGGCACTCAGCTAACAAAGGACAGAAGCAAGCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000591365.1 ENST00000670229.1 |
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| CDS CAA 72 bp | TTGGAGGTAGACAGTGAGGAGGCTTGCTTCTGTCCTTaGTTAGCTGAGTGCCCTTGGACAGCTTACTTACCT | + |
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Preference number: 6 (lower is better) Translates to: LEVDSEEACFCP*LAECPWTAYLP Trigger: AGGTAAGTAAGCTGTCCAAGGGCACTCAGCTAACAAAGGACAGAAGCAAGCCTCCTCACTGTCTACCTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000591365.1 ENST00000670229.1 |
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| CDS TCA 72 bp | AGAGGAAGCATGAACAGCTGGTCCCATAGGATGACTTaGAGCAGCCACTCTCCTAGAGAGGTTAAAAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: RGSMNSWSHRMT*SSHSPREVKSL Trigger: CAGACTTTTAACCTCTCTAGGAGAGTGGCTGCTTCAAGTCATCCTATGGGACCAGCTGTTCATGCTTCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000591365.1 ENST00000670229.1 |
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| CDS TCA 72 bp | TGTCAGTGGCTCTTCTCTGGCCATTGTCAGGATGAATaGAAGAGCTCTGAAAGTATTTCTTCTCAGTCCGGG | + |
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Preference number: 6 (lower is better) Translates to: CQWLFSGHCQDE*KSSESISSQSG Trigger: CCCGGACTGAGAAGAAATACTTTCAGAGCTCTTTCATTCATCCTGACAATGGCCAGAGAAGAGCCACTGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590495.1 |
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| CDS TCA 72 bp | AGATCCCTGGGAAAACCTTATCAATCACCTGGGTTCTaGATATTCCCAGTGACTGCACTGAAGGTGACAACA | + |
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Preference number: 6 (lower is better) Translates to: RSLGKPYQSPGF*IFPVTALKVTT Trigger: TGTTGTCACCTTCAGTGCAGTCACTGGGAATATTCAGAACCCAGGTGATTGATAAGGTTTTCCCAGGGATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000585471.1 ENST00000670229.1 |
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| CDS CCA 72 bp | AGAGAAGAGATCCCTGGGAAAACCTTATCAATCACCTaGGTTCTGAATATTCCCAGTGACTGCACTGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: REEIPGKTLSIT*VLNIPSDCTEG Trigger: ACCTTCAGTGCAGTCACTGGGAATATTCAGAACCCAGGTGATTGATAAGGTTTTCCCAGGGATCTCTTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000585471.1 ENST00000670229.1 |
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| CDS CCA 72 bp | CTACTGAGTAATGGTGAAGGGGAGAGAAGAGATCCCTaGGAAAACCTTATCAATCACCTGGGTTCTGAATAT | + |
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Preference number: 6 (lower is better) Translates to: LLSNGEGERRDP*ENLINHLGSEY Trigger: ATATTCAGAACCCAGGTGATTGATAAGGTTTTCCCAGGGATCTCTTCTCTCCCCTTCACCATTACTCAGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000585471.1 ENST00000670229.1 |
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| CDS TCA 72 bp | CTATTTCTCTTCCTTCAAAACAATCCTCAAAGCCTGTaGATCCCCTCCAGTGTGCTTATTATGCAGTTAGCT | + |
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Preference number: 6 (lower is better) Translates to: LFLFLQNNPQSL*IPSSVLIMQLA Trigger: AGCTAACTGCATAATAAGCACACTGGAGGGGATTCACAGGCTTTGAGGATTGTTTTGAAGGAAGAGAAATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586376.5 |
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