RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FMN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000248905

Ensembl transcript IDs: ENST00000320930.7, ENST00000334528.13, ENST00000558197.1, ENST00000558628.1, ENST00000558711.1, ENST00000558882.1, ENST00000559150.1, ENST00000559610.1, ENST00000560317.5, ENST00000561249.5, ENST00000616417.5, ENST00000672206.1, ENST00000674090.1

Found 1641 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCTGGCATGTCACTATGGACCGGCGGCACCTCCCTGCTGAGGGCTaGGGGTCCTGCCCAGCAGCTGCCTCCACACCACTCAGCCTCCCT +
Preference number: 1 (lower is better)
Translates to: AWHVTMDRRHLPAEG*GSCPAAASTPLSLP
Trigger: AGGGAGGCTGAGTGGTGTGGAGGCAGCTGCTGGGCAGGACCCGCAGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACATGCCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR TCA 90 bp GTTCCCAGCCTGGCATGTCACTATGGACCGGCGGCACCTCCCTGCTaGGGGCTGCGGGTCCTGCCCAGCAGCTGCCTCCACACCACTCAG +
Preference number: 1 (lower is better)
Translates to: VPSLACHYGPAAPPC*GLRVLPSSCLHTTQ
Trigger: CTGAGTGGTGTGGAGGCAGCTGCTGGGCAGGACCCGCAGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACATGCCAGGCTGGGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR GCA 90 bp GTCACTATGGACCGGCGGCACCTCCCTGCTGAGGGCTGCGGGTCCTaGCCAGCAGCTGCCTCCACACCACTCAGCCTCCCTCTTAAGTTC +
Preference number: 1 (lower is better)
Translates to: VTMDRRHLPAEGCGS*PAAASTPLSLPLKF
Trigger: GAACTTAAGAGGGAGGCTGAGTGGTGTGGAGGCAGCTGCTGGGCAGGACCCGCAGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR CCA 90 bp GAGATCAGGTTGTGTGCCCTCAGTTCCCAGCCTGGCATGTCACTATaGACCGGCGGCACCTCCCTGCTGAGGGCTGCGGGTCCTGCCCAG +
Preference number: 1 (lower is better)
Translates to: EIRLCALSSQPGMSL*TGGTSLLRAAGPAQ
Trigger: CTGGGCAGGACCCGCAGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACATGCCAGGCTGGGAACTGAGGGCACACAACCTGATCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR GCA 90 bp CTCTCCTGTCTGGAAACTGCCTCCTGGGGATGGGGGTCGTCCAGCTaGACAGTCACAGCACATAACGTAGAACTCGGCTGCGTATCAACA +
Preference number: 1 (lower is better)
Translates to: LSCLETASWGWGSSS*TVTAHNVELGCVST
Trigger: TGTTGATACGCAGCCGAGTTCTACGTTATGTGCTGTGACTGTGCAGCTGGACGACCCCCATCCCCAGGAGGCAGTTTCCAGACAGGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR GCA 90 bp AGGTGCTCTGCCGCTGGGTCTCTTGTCCAAGCACACCCAAGGCTGTaGTTGCTCAGGTATTACATTTTCTCCTGGGAGTTGGGGTGCAGA +
Preference number: 1 (lower is better)
Translates to: RCSAAGSLVQAHPRL*LLRYYIFSWELGCR
Trigger: TCTGCACCCCAACTCCCAGGAGAAAATGTAATACCTGAGCAAGCACAGCCTTGGGTGTGCTTGGACAAGAGACCCAGCGGCAGAGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR CCA 90 bp AGGTGCTGTGAGTTGCATTTGCTCTCCTGTCTGGAAACTGCCTCCTaGGGATGGGGGTCGTCCAGCTGCACAGTCACAGCACATAACGTA +
Preference number: 1 (lower is better)
Translates to: RCCELHLLSCLETAS*GWGSSSCTVTAHNV
Trigger: TACGTTATGTGCTGTGACTGTGCAGCTGGACGACCCCCATCCCCAGGAGGCAGTTTCCAGACAGGAGAGCAAATGCAACTCACAGCACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR CCA 90 bp ATTATAGAAGCATTCCTGAGGGGCTGCTGGCTGGCAGGCATATCCTaGGAAGATGCTCAGGCACCTGGCAAGTCCAGGGGTTCTGGAAAG +
Preference number: 1 (lower is better)
Translates to: IIEAFLRGCWLAGIS*EDAQAPGKSRGSGK
Trigger: CTTTCCAGAACCCCTGGACTTGCCAGGTGCCTGAGCATCTTCCCAGGATATGCCTGCCAGCCAGCAGCCCCTCAGGAATGCTTCTATAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR GCA 90 bp GCTCTGCCGCTGGGTCTCTTGTCCAAGCACACCCAAGGCTGTGCTTaGTCAGGTATTACATTTTCTCCTGGGAGTTGGGGTGCAGAATCT +
Preference number: 1 (lower is better)
Translates to: ALPLGLLSKHTQGCA*SGITFSPGSWGAES
Trigger: AGATTCTGCACCCCAACTCCCAGGAGAAAATGTAATACCTGAGCAAGCACAGCCTTGGGTGTGCTTGGACAAGAGACCCAGCGGCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR CCA 90 bp TGTGAGTTGCATTTGCTCTCCTGTCTGGAAACTGCCTCCTGGGGATaGGGGTCGTCCAGCTGCACAGTCACAGCACATAACGTAGAACTC +
Preference number: 1 (lower is better)
Translates to: CELHLLSCLETASWG*GSSSCTVTAHNVEL
Trigger: GAGTTCTACGTTATGTGCTGTGACTGTGCAGCTGGACGACCCCCATCCCCAGGAGGCAGTTTCCAGACAGGAGAGCAAATGCAACTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR CCA 90 bp CTAGTTCAGGGAGGGCTATGCCTAGAACAGCCACTTAAAGCCTGCTaGCAGGATGTGCTTAAGCTGCCAAATGGCATCCCGATCACCTCC +
Preference number: 1 (lower is better)
Translates to: LVQGGLCLEQPLKAC*QDVLKLPNGIPITS
Trigger: GGAGGTGATCGGGATGCCATTTGGCAGCTTAAGCACATCCTGCCAGCAGGCTTTAAGTGGCTGTTCTAGGCATAGCCCTCCCTGAACTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR TCA 90 bp ATCCTACTTCACATGCCTATCAGCCAAGGTCATGAGCAGGTGCTGTaGGTTGCATTTGCTCTCCTGTCTGGAAACTGCCTCCTGGGGATG +
Preference number: 1 (lower is better)
Translates to: ILLHMPISQGHEQVL*VAFALLSGNCLLGM
Trigger: CATCCCCAGGAGGCAGTTTCCAGACAGGAGAGCAAATGCAACTCACAGCACCTGCTCATGACCTTGGCTGATAGGCATGTGAAGTAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR GCA 90 bp GCTTCATCCTACTTCACATGCCTATCAGCCAAGGTCATGAGCAGGTaGTGTGAGTTGCATTTGCTCTCCTGTCTGGAAACTGCCTCCTGG +
Preference number: 1 (lower is better)
Translates to: ASSYFTCLSAKVMSR*CELHLLSCLETASW
Trigger: CCAGGAGGCAGTTTCCAGACAGGAGAGCAAATGCAACTCACAGCACCTGCTCATGACCTTGGCTGATAGGCATGTGAAGTAGGATGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR GCA 90 bp TTTCTAGTTCAGGGAGGGCTATGCCTAGAACAGCCACTTAAAGCCTaGTGGCAGGATGTGCTTAAGCTGCCAAATGGCATCCCGATCACC +
Preference number: 1 (lower is better)
Translates to: FLVQGGLCLEQPLKA*WQDVLKLPNGIPIT
Trigger: GGTGATCGGGATGCCATTTGGCAGCTTAAGCACATCCTGCCAGCAGGCTTTAAGTGGCTGTTCTAGGCATAGCCCTCCCTGAACTAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR CCA 90 bp ACCCAAGGCTGTGCTTGCTCAGGTATTACATTTTCTCCTGGGAGTTaGGGTGCAGAATCTCTGCTGGCCCAGAAAAACCACAAAGGACCG +
Preference number: 1 (lower is better)
Translates to: TQGCACSGITFSPGS*GAESLLAQKNHKGP
Trigger: CGGTCCTTTGTGGTTTTTCTGGGCCAGCAGAGATTCTGCACCCCAACTCCCAGGAGAAAATGTAATACCTGAGCAAGCACAGCCTTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR GCA 90 bp CACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATaGGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCATGTGTC +
Preference number: 1 (lower is better)
Translates to: HIFQERPATLWSQRV*VQGPPPPVPSFPCV
Trigger: GACACATGGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
3UTR TCA 90 bp AGCTTGTCTTTGTGCCCTTGTACTAAACTCCCGTGTCGTGTGGTATaGCAACACCAGCATGTCTGTGCAGATTCTTCTCCAGGAGGGCTT +
Preference number: 1 (lower is better)
Translates to: SLSLCPCTKLPCRVV*QHQHVCADSSPGGL
Trigger: AAGCCCTCCTGGAGAAGAATCTGCACAGACATGCTGGTGTTGTCATACCACACGACACGGGAGTTTAGTACAAGGGCACAAAGACAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR GCA 90 bp TCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTaGAAGGTCCTCCACCTCCAGTGCCATCATTTCCATGTGTCTTCA +
Preference number: 1 (lower is better)
Translates to: SFKNVLQPCGHKEYA*KVLHLQCHHFHVSS
Trigger: TGAAGACACATGGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
3UTR CCA 90 bp AGGACACTGCTTTGCAGGCTAGCACAACTAGAGTTCCTCAAGGTTTaGGGGAAGACCATACTCCACAAAGGCTTGGGAACATTCCACATC +
Preference number: 1 (lower is better)
Translates to: RTLLCRLAQLEFLKV*GKTILHKGLGTFHI
Trigger: GATGTGGAATGTTCCCAAGCCTTTGTGGAGTATGGTCTTCCCCCAAACCTTGAGGAACTCTAGTTGTGCTAGCCTGCAAAGCAGTGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
3UTR CCA 90 bp TCAGGGAATGAAGAGGTTCCCCGGTCAATGTTACAGCCTGGTTCCTaGAAAAAGAGCCTGCAAGCGTGCATTGCTAATTCCCATTCACAC +
Preference number: 1 (lower is better)
Translates to: SGNEEVPRSMLQPGS*KKSLQACIANSHSH
Trigger: GTGTGAATGGGAATTAGCAATGCACGCTTGCAGGCTCTTTTTCCAGGAACCAGGCTGTAACATTGACCGGGGAACCTCTTCATTCCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR TCA 90 bp CATACTCTGCCTCTTCTAGCAACACTGCCAGCTCACAAAATTGTATaGGGACCAACCACCGGCTTCCTGAGGGATTTGCAATCTACCTTC +
Preference number: 1 (lower is better)
Translates to: HTLPLLATLPAHKIV*GPTTGFLRDLQSTF
Trigger: GAAGGTAGATTGCAAATCCCTCAGGAAGCCGGTGGTTGGTCCTCATACAATTTTGTGAGCTGGCAGTGTTGCTAGAAGAGGCAGAGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR GCA 90 bp AGCATAGCAAACTGGTTACTCTCCTTTCTAGTTCAGGGAGGGCTATaGCTAGAACAGCCACTTAAAGCCTGCTGGCAGGATGTGCTTAAG +
Preference number: 1 (lower is better)
Translates to: SIANWLLSFLVQGGL*LEQPLKACWQDVLK
Trigger: CTTAAGCACATCCTGCCAGCAGGCTTTAAGTGGCTGTTCTAGGCATAGCCCTCCCTGAACTAGAAAGGAGAGTAACCAGTTTGCTATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR CCA 90 bp ACAGAAGCTTGTCTTTGTGCCCTTGTACTAAACTCCCGTGTCGTGTaGTATGACAACACCAGCATGTCTGTGCAGATTCTTCTCCAGGAG +
Preference number: 1 (lower is better)
Translates to: TEACLCALVLNSRVV*YDNTSMSVQILLQE
Trigger: CTCCTGGAGAAGAATCTGCACAGACATGCTGGTGTTGTCATACCACACGACACGGGAGTTTAGTACAAGGGCACAAAGACAAGCTTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR GCA 90 bp GTTGGAGCTGTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTaGTTTCCCAGTACATTGGCACTGATCAATACAAGATCAAGGGCA +
Preference number: 1 (lower is better)
Translates to: VGAVKPSTDQFHWGT*FPSTLALINTRSRA
Trigger: TGCCCTTGATCTTGTATTGATCAGTGCCAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAACAGCTCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR GCA 90 bp ATGGCATCCCGATCACCTCCTCTCCAGGAAAAGTTCAGATCCTCCTaGTACACTGAACACAAGCTCAACAGCATTTTAGAGGGATCATTT +
Preference number: 1 (lower is better)
Translates to: MASRSPPLQEKFRSS*YTEHKLNSILEGSF
Trigger: AAATGATCCCTCTAAAATGCTGTTGAGCTTGTGTTCAGTGTAGCAGGAGGATCTGAACTTTTCCTGGAGAGGAGGTGATCGGGATGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR TCA 90 bp CAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGGCACTaGTCAATACAAGATCAAGGGCACTCACATTTGCCTAATACAGAT +
Preference number: 1 (lower is better)
Translates to: QTSFTGVPAFPVHWH*SIQDQGHSHLPNTD
Trigger: ATCTGTATTAGGCAAATGTGAGTGCCCTTGATCTTGTATTGATCAGTGCCAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR GCA 90 bp CATTTAGGAAACACCATTCTTCATGGTGCTTATGAAAACAGGAGGTaGCTGAAGGAGGCTGAGAAGAGGTTTGCAGCTTCTACTGTCCTT +
Preference number: 1 (lower is better)
Translates to: HLGNTILHGAYENRR*LKEAEKRFAASTVL
Trigger: AAGGACAGTAGAAGCTGCAAACCTCTTCTCAGCCTCCTTCAGGCACCTCCTGTTTTCATAAGCACCATGAAGAATGGTGTTTCCTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR CCA 90 bp AGAGAAAAGGGAACTAGACAGAGGATACAAATCAAAGGTACTATCTaGGGAACTCCCTCCCTCATGCCTTTCAAAGTAGGGCCAATAGGA +
Preference number: 1 (lower is better)
Translates to: REKGTRQRIQIKGTI*GTPSLMPFKVGPIG
Trigger: TCCTATTGGCCCTACTTTGAAAGGCATGAGGGAGGGAGTTCCCCAGATAGTACCTTTGATTTGTATCCTCTGTCTAGTTCCCTTTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
3UTR TCA 90 bp AGTTCAGTAGATTGCCCATTCCTTGGGAAGGGAGATGAAGAATTGTaGAACCAAAATGCAGTGCCTCTAATAAGGTGTCAACAGCGGACA +
Preference number: 1 (lower is better)
Translates to: SSVDCPFLGKGDEEL*NQNAVPLIRCQQRT
Trigger: TGTCCGCTGTTGACACCTTATTAGAGGCACTGCATTTTGGTTTCACAATTCTTCATCTCCCTTCCCAAGGAATGGGCAATCTACTGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR CCA 90 bp TCTGAAATTGTTGGAGCTGTTAAACCAAGCACAGACCAGTTTCACTaGGGTACCTGCTTTCCCAGTACATTGGCACTGATCAATACAAGA +
Preference number: 1 (lower is better)
Translates to: SEIVGAVKPSTDQFH*GTCFPSTLALINTR
Trigger: TCTTGTATTGATCAGTGCCAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAACAGCTCCAACAATTTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR TCA 90 bp CAATACAAGATCAAGGGCACTCACATTTGCCTAATACAGATGCCTTaGATTTCCACGGAAAAGCTGTCCACGATACGACCATGGCAAAAA +
Preference number: 1 (lower is better)
Translates to: QYKIKGTHICLIQMP*ISTEKLSTIRPWQK
Trigger: TTTTTGCCATGGTCGTATCGTGGACAGCTTTTCCGTGGAAATTCAAGGCATCTGTATTAGGCAAATGTGAGTGCCCTTGATCTTGTATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR GCA 90 bp AGATTCTCAGTTCTCAATATCAGGAAGAACTATGCCTGGAGCATATaGTTCCATCACCACATCAGTGACTTCAGTCAAAGGAAAACAACC +
Preference number: 1 (lower is better)
Translates to: RFSVLNIRKNYAWSI*FHHHISDFSQRKTT
Trigger: GGTTGTTTTCCTTTGACTGAAGTCACTGATGTGGTGATGGAAGCATATGCTCCAGGCATAGTTCTTCCTGATATTGAGAACTGAGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
3UTR CCA 90 bp TTGATCAAGAGATTCTCAGTTCTCAATATCAGGAAGAACTATGCCTaGAGCATATGCTTCCATCACCACATCAGTGACTTCAGTCAAAGG +
Preference number: 1 (lower is better)
Translates to: LIKRFSVLNIRKNYA*SICFHHHISDFSQR
Trigger: CCTTTGACTGAAGTCACTGATGTGGTGATGGAAGCATATGCTCCAGGCATAGTTCTTCCTGATATTGAGAACTGAGAATCTCTTGATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
3UTR TCA 90 bp ATGGAAGCCTTCCAAATATTATGCAGAACACAATCTCAGTGGCGCTaGGCTACCTTCTTTATGCCTTGTGGTCCAATGTATGAAGAAATA +
Preference number: 1 (lower is better)
Translates to: MEAFQILCRTQSQWR*ATFFMPCGPMYEEI
Trigger: TATTTCTTCATACATTGGACCACAAGGCATAAAGAAGGTAGCTCAGCGCCACTGAGATTGTGTTCTGCATAATATTTGGAAGGCTTCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR GCA 90 bp TTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTaGAGATTTCTTTATGAGGTCAAAGTAGCAGACATGAATGAAAGT +
Preference number: 1 (lower is better)
Translates to: FKSHQLGHTDWFHLC*RFLYEVKVADMNES
Trigger: ACTTTCATTCATGTCTGCTACTTTGACCTCATAAAGAAATCTGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR GCA 90 bp AAGGTTCTCCTACTTCACACACATTCCCCCTTTCATTCATTCCACTaGATTCATCTTTCATCTTTCAGAGGCTCGTTAACAATAAGTGTG +
Preference number: 1 (lower is better)
Translates to: KVLLLHTHSPFHSFH*IHLSSFRGSLTISV
Trigger: CACACTTATTGTTAACGAGCCTCTGAAAGATGAAAGATGAATGCAGTGGAATGAATGAAAGGGGGAATGTGTGTGAAGTAGGAGAACCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR TCA 90 bp GAACTTCAGAGATGTAATATAAAGTCTGGAGTTCACATGAGCTCTTaGCTGAAGGACACGATCCTATCAGAGAAAGGTAAGAGAGAAAAG +
Preference number: 1 (lower is better)
Translates to: ELQRCNIKSGVHMSS*LKDTILSEKGKREK
Trigger: CTTTTCTCTCTTACCTTTCTCTGATAGGATCGTGTCCTTCAGTCAAGAGCTCATGTGAACTCCAGACTTTATATTACATCTCTGAAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR CCA 90 bp GTTATTTCCACAGGAAATAAATGTCCACAGACCATAAACTTAATCTaGTTAATAGCTAACCTGGGAGAAAGGTGGGAGTTGGGTTCAGAT +
Preference number: 1 (lower is better)
Translates to: VISTGNKCPQTINLI*LIANLGERWELGSD
Trigger: ATCTGAACCCAACTCCCACCTTTCTCCCAGGTTAGCTATTAACCAGATTAAGTTTATGGTCTGTGGACATTTATTTCCTGTGGAAATAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
3UTR CCA 90 bp AAATTATCCACTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTaGTTTCATCTGTGTTGCAGATTTCTTTATGAGGTCAAAGTAGCA +
Preference number: 1 (lower is better)
Translates to: KLSTLFKSHQLGHTD*FHLCCRFLYEVKVA
Trigger: TGCTACTTTGACCTCATAAAGAAATCTGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAGTGGATAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR TCA 90 bp AACTCTCCCAAGGCAACTGTCCTCAATGATCTTTTCTCTCTTCTGTaGCAATGTGACATATATCAAGCTTTGGTTATAAAGCTGGAAATC +
Preference number: 1 (lower is better)
Translates to: NSPKATVLNDLFSLL*QCDIYQALVIKLEI
Trigger: GATTTCCAGCTTTATAACCAAAGCTTGATATATGTCACATTGTCACAGAAGAGAGAAAAGATCATTGAGGACAGTTGCCTTGGGAGAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR TCA 90 bp TTCTTCTGCTACATCTCACTGCGGCCCTTAGAAAAACCGTACCAATaGCTTATCTTACTGGAGGTGTTAATACCACCAACATATTTTATT +
Preference number: 1 (lower is better)
Translates to: FFCYISLRPLEKPYQ*LILLEVLIPPTYFI
Trigger: AATAAAATATGTTGGTGGTATTAACACCTCCAGTAAGATAAGTCATTGGTACGGTTTTTCTAAGGGCCGCAGTGAGATGTAGCAGAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR GCA 90 bp AGAGTGGACTTTGGGCTTCCACAAGAAACAGTCATCAAATATTTCTaGAATGTTCCCTTAAATAGTTTTCCATTGTTCCTGCGGCTTAAT +
Preference number: 1 (lower is better)
Translates to: RVDFGLPQETVIKYF*NVPLNSFPLFLRLN
Trigger: ATTAAGCCGCAGGAACAATGGAAAACTATTTAAGGGAACATTGCAGAAATATTTGATGACTGTTTCTTGTGGAAGCCCAAAGTCCACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR GCA 90 bp GATAATACATGTTCTTGGACCTCTTCAAGAATAGTTTTGGTGAGTTaGAACATTATTGGAGAGAAAGATGCTGCAGGATTTTGCTGCAAC +
Preference number: 1 (lower is better)
Translates to: DNTCSWTSSRIVLVS*NIIGEKDAAGFCCN
Trigger: GTTGCAGCAAAATCCTGCAGCATCTTTCTCTCCAATAATGTTGCAACTCACCAAAACTATTCTTGAAGAGGTCCAAGAACATGTATTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR GCA 90 bp CACAAAAGTGAACGAGTAACTGATACGGTATCTGTACATTCACTCTaGACAAGGTTCCTTTATCTCAAAAGCATTACTCGAAGACAAACA +
Preference number: 1 (lower is better)
Translates to: HKSERVTDTVSVHSL*TRFLYLKSITRRQT
Trigger: TGTTTGTCTTCGAGTAATGCTTTTGAGATAAAGGAACCTTGTGCAGAGTGAATGTACAGATACCGTATCAGTTACTCGTTCACTTTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR GCA 90 bp CTAGAACATCCTTATGCTTTCTTTACTGCTGTGTCTGAATTGCTCTaGTCAGATGAAACAATCATTTTCCACCCTTATGCTGTTCATTCT +
Preference number: 1 (lower is better)
Translates to: LEHPYAFFTAVSELL*SDETIIFHPYAVHS
Trigger: AGAATGAACAGCATAAGGGTGGAAAATGATTGTTTCATCTGAGCAGAGCAATTCAGACACAGCAGTAAAGAAAGCATAAGGATGTTCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR CCA 90 bp CTAGAAATCATCTCAAGATTCAACTGCCAGTGTGTTCTCAATCACTaGAGTAATTTGATATTATGGAAAAACCTACTGAACCACCCAACT +
Preference number: 1 (lower is better)
Translates to: LEIISRFNCQCVLNH*SNLILWKNLLNHPT
Trigger: AGTTGGGTGGTTCAGTAGGTTTTTCCATAATATCAAATTACTCCAGTGATTGAGAACACACTGGCAGTTGAATCTTGAGATGATTTCTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR GCA 90 bp TATGTAACTTATGATATTGTGTGCTCTGATGCTGTCAATTGCTCATaGAAGAATCTGAACTACTGTCAAACTGTGTCCTCAGATTTAATG +
Preference number: 1 (lower is better)
Translates to: YVTYDIVCSDAVNCS*KNLNYCQTVSSDLM
Trigger: CATTAAATCTGAGGACACAGTTTGACAGTAGTTCAGATTCTTGCATGAGCAATTGACAGCATCAGAGCACACAATATCATAAGTTACATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR GCA 90 bp ATTCAAGTTTGGGTTAAACAGAAGTTTAGCCCTATGCTACTTCTATaGTTCAATTACCTAGAACATCCTTATGCTTTCTTTACTGCTGTG +
Preference number: 1 (lower is better)
Translates to: IQVWVKQKFSPMLLL*FNYLEHPYAFFTAV
Trigger: CACAGCAGTAAAGAAAGCATAAGGATGTTCTAGGTAATTGAAGCATAGAAGTAGCATAGGGCTAAACTTCTGTTTAACCCAAACTTGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR CCA 90 bp GAATTGATACTAGACTTTCCCTCTCACTCATGGATTTGTTTTCAATaGAAATGGAAGCCTTCCAAATATTATGCAGAACACAATCTCAGT +
Preference number: 1 (lower is better)
Translates to: ELILDFPSHSWICFQ*KWKPSKYYAEHNLS
Trigger: ACTGAGATTGTGTTCTGCATAATATTTGGAAGGCTTCCATTTCCATTGAAAACAAATCCATGAGTGAGAGGGAAAGTCTAGTATCAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR CCA 90 bp TCTGCCCAGGGCCTGCTGGGCGCCCATGGTGGTACCATAACTGTGCAGGGGATCGGTCTGTGCCCTTTCTaGGCCCCGGTGACAGGCCTG +
Preference number: 2 (lower is better)
Translates to: SAQGLLGAHGGTITVQGIGLCPF*APVTGL
Trigger: CAGGCCTGTCACCGGGGCCCAGAAAGGGCACAGACC...GATCCCCTGCACAGTTATGGTACCACCATGGGCGCCCAGCAGGCCCTGGGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR-3UTR GCA 90 bp CAGCCTGGCATGTCACTATGGACCGGCGGCACCTCCCTGCTGAGGGCTGCGGGTAGCGACTTCTACTCTTaGCCCTTCAGGCTTGGGTGT +
Preference number: 2 (lower is better)
Translates to: QPGMSLWTGGTSLLRAAGSDFYS*PFRLGC
Trigger: ACACCCAAGCCTGAAGGGGCAAGAGTAGAAGTCGCT...ACCCGCAGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACATGCCAGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR-3UTR TCA 90 bp ATGTCACTATGGACCGGCGGCACCTCCCTGCTGAGGGCTGCGGGTCCTGCCCAGCATTTGAGTGCCACCTaGTTCCTGATTAGTACGACC +
Preference number: 2 (lower is better)
Translates to: MSLWTGGTSLLRAAGPAQHLSAT*FLISTT
Trigger: GGTCGTACTAATCAGGAATCAGGTGGCACTCAAATG...CTGGGCAGGACCCGCAGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR-3UTR GCA 90 bp CTTTGTGCCCTTGTACTAAACTCCCGTGTCGTGTGGTATGACAACACCAGCATGGAGGGCTGCGGGTCCTaGCCAGCAGCTGCCTCCACA +
Preference number: 2 (lower is better)
Translates to: LCALVLNSRVVWYDNTSMEGCGS*PAAAST
Trigger: TGTGGAGGCAGCTGCTGGGCAGGACCCGCAGCCCTC...CATGCTGGTGTTGTCATACCACACGACACGGGAGTTTAGTACAAGGGCACAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR CAA 90 bp ACATGCCTATCAGCCAAGGTCATGAGCAGGTGCTGTGAGTTGCATTaGCTCTCCTGTCTGGAAACTGCCTCCTGGGGATGGGGGTCGTCC +
Preference number: 2 (lower is better)
Translates to: TCLSAKVMSRCCELH*LSCLETASWGWGSS
Trigger: GGACGACCCCCATCCCCAGGAGGCAGTTTCCAGACAGGAGAGCAAATGCAACTCACAGCACCTGCTCATGACCTTGGCTGATAGGCATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR CAA 90 bp ACATTAACAAGAGGCAGTCACAGCAGTGTGTCTCACATGGGCTCCTaGGTGACAGCGGAGCTCCCTGTCCAAACGGCTGAGGAACGGAGC +
Preference number: 2 (lower is better)
Translates to: TLTRGSHSSVSHMGS*VTAELPVQTAEERS
Trigger: GCTCCGTTCCTCAGCCGTTTGGACAGGGAGCTCCGCTGTCACCAAGGAGCCCATGTGAGACACACTGCTGTGACTGCCTCTTGTTAATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR TCA 90 bp GGAGGAGGGGCCAAGGGAGCTACTCAGTTGTCTATGATGCAGAGGTGTGAAAAACGCCCGGCCCGGGCCTaGTGCTTTTTACCTAACGTG +
Preference number: 2 (lower is better)
Translates to: GGGAKGATQLSMMQRCEKRPARA*CFLPNV
Trigger: CACGTTAGGTAAAAAGCATCAGGCCCGGGCCGGGCG...TTTTTCACACCTCTGCATCATAGACAACTGAGTAGCTCCCTTGGCCCCTCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR GCA 90 bp GGCAGGATGTGCTTAAGCTGCCAAATGGCATCCCGATCACCTCCTCTCCAGGAATGGGGGTCGTCCAGCTaGACAGTCACAGCACATAAC +
Preference number: 2 (lower is better)
Translates to: GRMCLSCQMASRSPPLQEWGSSS*TVTAHN
Trigger: GTTATGTGCTGTGACTGTGCAGCTGGACGACCCCCA...TTCCTGGAGAGGAGGTGATCGGGATGCCATTTGGCAGCTTAAGCACATCCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR GCA 90 bp TCTGCCCAGGGCCTGCTGGGCGCCCATGGTGGTACCATAACTGTGCAGGGGATCTCCAGAGAGTTAGGTTaGTTTAAAGTTGGCCATGCA +
Preference number: 2 (lower is better)
Translates to: SAQGLLGAHGGTITVQGISRELG*FKVGHA
Trigger: TGCATGGCCAACTTTAAAGCAACCTAACTCTCTGGA...GATCCCCTGCACAGTTATGGTACCACCATGGGCGCCCAGCAGGCCCTGGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR-3UTR CCA 90 bp GTGATGCTGACATTAACAAGAGGCAGTCACAGCAGTGTGTCTCACATGGGCTCCGGGGCAGGCCACATGTaGAGGCTGGATCAGGAAGGA +
Preference number: 2 (lower is better)
Translates to: VMLTLTRGSHSSVSHMGSGAGHM*RLDQEG
Trigger: TCCTTCCTGATCCAGCCTCCACATGTGGCCTGCCCC...GGAGCCCATGTGAGACACACTGCTGTGACTGCCTCTTGTTAATGTCAGCATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR CAA 90 bp TGCTCTGCCGCTGGGTCTCTTGTCCAAGCACACCCAAGGCTGTGCTaGCTCAGGTATTACATTTTCTCCTGGGAGTTGGGGTGCAGAATC +
Preference number: 2 (lower is better)
Translates to: CSAAGSLVQAHPRLC*LRYYIFSWELGCRI
Trigger: GATTCTGCACCCCAACTCCCAGGAGAAAATGTAATACCTGAGCAAGCACAGCCTTGGGTGTGCTTGGACAAGAGACCCAGCGGCAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR CAA 90 bp TACTTCACATGCCTATCAGCCAAGGTCATGAGCAGGTGCTGTGAGTaGCATTTGCTCTCCTGTCTGGAAACTGCCTCCTGGGGATGGGGG +
Preference number: 2 (lower is better)
Translates to: YFTCLSAKVMSRCCE*HLLSCLETASWGWG
Trigger: CCCCCATCCCCAGGAGGCAGTTTCCAGACAGGAGAGCAAATGCAACTCACAGCACCTGCTCATGACCTTGGCTGATAGGCATGTGAAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR CCA 90 bp GTGATGCTGACATTAACAAGAGGCAGTCACAGCAGTGTGTCTCACATGGGCTCCCTGTCCTCCACCAATTaGGGGGAGAAAGCTCGGCCT +
Preference number: 2 (lower is better)
Translates to: VMLTLTRGSHSSVSHMGSLSSTN*GEKARP
Trigger: AGGCCGAGCTTTCTCCCCCCAATTGGTGGAGGACAG...GGAGCCCATGTGAGACACACTGCTGTGACTGCCTCTTGTTAATGTCAGCATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR CAA 90 bp CCTGAAATGATAGCCTCAAGTGGCTCCCAGTCTGCTGACTTCTCTTaGGGTTTGGCCAATGGGAATGACGATGAGGGACCAGAGAGTGGG +
Preference number: 2 (lower is better)
Translates to: PEMIASSGSQSADFS*GLANGNDDEGPESG
Trigger: CCCACTCTCTGGTCCCTCATCGTCATTCCCATTGGCCAAACCCAAAGAGAAGTCAGCAGACTGGGAGCCACTTGAGGCTATCATTTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR-3UTR TCA 90 bp GGAGGAGGGGCCAAGGGAGCTACTCAGTTGTCTATGATGCAGAGGTGTGAAAAATTCAGCACTGGTTCCTaGAGGGTTACGTGGCCACAG +
Preference number: 2 (lower is better)
Translates to: GGGAKGATQLSMMQRCEKFSTGS*RVTWPQ
Trigger: CTGTGGCCACGTAACCCTTCAGGAACCAGTGCTGAA...TTTTTCACACCTCTGCATCATAGACAACTGAGTAGCTCCCTTGGCCCCTCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR CCA 90 bp GTGATGCTGACATTAACAAGAGGCAGTCACAGCAGTGTGTCTCACATGGGCTCCAGCAACGTGGTACATTaGTGGACTTGGGAGGGGGCA +
Preference number: 2 (lower is better)
Translates to: VMLTLTRGSHSSVSHMGSSNVVH*WTWEGA
Trigger: TGCCCCCTCCCAAGTCCACCAATGTACCACGTTGCT...GGAGCCCATGTGAGACACACTGCTGTGACTGCCTCTTGTTAATGTCAGCATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR CAA 90 bp ATGATAGCCTCAAGTGGCTCCCAGTCTGCTGACTTCTCTTTGGGTTaGGCCAATGGGAATGACGATGAGGGACCAGAGAGTGGGATGAGA +
Preference number: 2 (lower is better)
Translates to: MIASSGSQSADFSLG*ANGNDDEGPESGMR
Trigger: TCTCATCCCACTCTCTGGTCCCTCATCGTCATTCCCATTGGCCAAACCCAAAGAGAAGTCAGCAGACTGGGAGCCACTTGAGGCTATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR-3UTR TCA 90 bp GGAGGAGGGGCCAAGGGAGCTACTCAGTTGTCTATGATGCAGAGGTGTGAAAAACATGAGCAGGTGCTGTaGGTTGCATTTGCTCTCCTG +
Preference number: 2 (lower is better)
Translates to: GGGAKGATQLSMMQRCEKHEQVL*VAFALL
Trigger: CAGGAGAGCAAATGCAACTCACAGCACCTGCTCATG...TTTTTCACACCTCTGCATCATAGACAACTGAGTAGCTCCCTTGGCCCCTCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR TCA 90 bp GGAGGAGGGGCCAAGGGAGCTACTCAGTTGTCTATGATGCAGAGGTGTGAAAAAGACAAGCTGTGTAACTaGGCCCGGTTATGCCTGGAT +
Preference number: 2 (lower is better)
Translates to: GGGAKGATQLSMMQRCEKDKLCN*ARLCLD
Trigger: ATCCAGGCATAACCGGGCTCAGTTACACAGCTTGTC...TTTTTCACACCTCTGCATCATAGACAACTGAGTAGCTCCCTTGGCCCCTCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR TCA 90 bp TCTACGTGCTTCTCCAGGTCTGTGCCCTTTCTGGGCCCCGGTGACAGGCCTGAAAGAAAGAAAATGCTATaGAGTAACCAATGCCCTGCA +
Preference number: 2 (lower is better)
Translates to: STCFSRSVPFLGPGDRPERKKML*SNQCPA
Trigger: TGCAGGGCATTGGTTACTTCATAGCATTTTCTTTCT...TTCAGGCCTGTCACCGGGGCCCAGAAAGGGCACAGACCTGGAGAAGCACGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR-3UTR GCA 90 bp TCTACGTGCTTCTCCAGGTCTGTGCCCTTTCTGGGCCCCGGTGACAGGCCTGAAATCTCAAGATTCAACTaGCAGTGTGTTCTCAATCAC +
Preference number: 2 (lower is better)
Translates to: STCFSRSVPFLGPGDRPEISRFN*QCVLNH
Trigger: GTGATTGAGAACACACTGGCAGTTGAATCTTGAGAT...TTCAGGCCTGTCACCGGGGCCCAGAAAGGGCACAGACCTGGAGAAGCACGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR-3UTR CCA 90 bp AAAGGTAGCTGGAAGCAGGAAACTTCTCCCTGTATGGGCTTCCCAGCTGCAGGGATAGGAGGTAATGGCTaGAGGCCCTATAGGAAGTCT +
Preference number: 2 (lower is better)
Translates to: KGSWKQETSPCMGFPAAGIGGNG*RPYRKS
Trigger: AGACTTCCTATAGGGCCTCCAGCCATTACCTCCTAT...CCCTGCAGCTGGGAAGCCCATACAGGGAGAAGTTTCCTGCTTCCAGCTACCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
3UTR-3UTR CCA 90 bp CTAGCACCAAGCTCCAAGGACACTGCTTTGCAGGCTAGCACAACTAGAGTTCCTCTCTTTCTGGACTGCTaGCAACTCTCTGAGCCCTCT +
Preference number: 2 (lower is better)
Translates to: LAPSSKDTALQASTTRVPLFLDC*QLSEPS
Trigger: AGAGGGCTCAGAGAGTTGCCAGCAGTCCAGAAAGAG...AGGAACTCTAGTTGTGCTAGCCTGCAAAGCAGTGTCCTTGGAGCTTGGTGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
3UTR-3UTR CCA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGAGATGCTCAGGCACCTaGCAAGTCCAGGGGTTCTGG +
Preference number: 2 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLRCSGT*QVQGFW
Trigger: CCAGAACCCCTGGACTTGCCAGGTGCCTGAGCATCT...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR TCA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGTTCAGCACTGGTTCCTaGAGGGTTACGTGGCCACAG +
Preference number: 2 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLFSTGS*RVTWPQ
Trigger: CTGTGGCCACGTAACCCTTCAGGAACCAGTGCTGAA...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR GCA 90 bp ACTCAAGAGCATACTAAAGATTGGGCATTTCCCAAGTATGGTGAGCCAAGCTCCCCCCTCTTTCTGGACTaGTGGCAACTCTCTGAGCCC +
Preference number: 2 (lower is better)
Translates to: TQEHTKDWAFPKYGEPSSPLFLD*WQLSEP
Trigger: GGGCTCAGAGAGTTGCCAGCAGTCCAGAAAGAGGGG...GGAGCTTGGCTCACCATACTTGGGAAATGCCCAATCTTTAGTATGCTCTTGAGT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000320930.7
3UTR-3UTR GCA 90 bp GTGATGCTGACATTAACAAGAGGCAGTCACAGCAGTGTGTCTCACATGGGCTCCGAGGGGAGGGGAGACTaGATGCCATCTGATATTCAA +
Preference number: 2 (lower is better)
Translates to: VMLTLTRGSHSSVSHMGSEGRGD*MPSDIQ
Trigger: TTGAATATCAGATGGCATGCAGTCTCCCCTCCCCTC...GGAGCCCATGTGAGACACACTGCTGTGACTGCCTCTTGTTAATGTCAGCATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR GCA 90 bp GGTCCTGCCCAGCAGCTGCCTCCACACCACTCAGCCTCCCTCTTAAGTTCTAGTTCTGTACATTCACTCTaGACAAGGTTCCTTTATCTC +
Preference number: 2 (lower is better)
Translates to: GPAQQLPPHHSASLLSSSSVHSL*TRFLYL
Trigger: GAGATAAAGGAACCTTGTGCAGAGTGAATGTACAGA...ACTAGAACTTAAGAGGGAGGCTGAGTGGTGTGGAGGCAGCTGCTGGGCAGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR-3UTR CCA 90 bp GACACTGCTTTGCAGGCTAGCACAACTAGAGTTCCTCAAGGTTTGGGGGAAGACATTCACCCCTCTTTCTaGACTGCTGGCAACTCTCTG +
Preference number: 2 (lower is better)
Translates to: DTALQASTTRVPQGLGEDIHPSF*TAGNSL
Trigger: CAGAGAGTTGCCAGCAGTCCAGAAAGAGGGGTGAAT...GTCTTCCCCCAAACCTTGAGGAACTCTAGTTGTGCTAGCCTGCAAAGCAGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320930.7
3UTR-3UTR CCA 90 bp GCCTCTAATAAGGTGTCAACAGCGGACAGGTGTGCAGAAATGACACAAAATGGGCAAGTCCAGGGGTTCTaGAAAGATGCTGGGGCAAGG +
Preference number: 2 (lower is better)
Translates to: ASNKVSTADRCAEMTQNGQVQGF*KDAGAR
Trigger: CCTTGCCCCAGCATCTTTCCAGAACCCCTGGACTTG...CCCATTTTGTGTCATTTCTGCACACCTGTCCGCTGTTGACACCTTATTAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR CCA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGGTTACGTGGCCACAGTaGCAGCCCTGCTTACCTTCA +
Preference number: 2 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLVTWPQ*QPCLPS
Trigger: TGAAGGTAAGCAGGGCTGCCACTGTGGCCACGTAAC...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR CCA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGAACGTGGTACATTGGTaGACTTGGGAGGGGGCATCC +
Preference number: 2 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLNVVHW*TWEGAS
Trigger: GGATGCCCCCTCCCAAGTCCACCAATGTACCACGTT...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR TCA 90 bp GCCTCTAATAAGGTGTCAACAGCGGACAGGTGTGCAGAAATGACACAAAATGGGGGTGGTTTCCTTATGTaGCTCAAGAGCCAGGGTCAG +
Preference number: 2 (lower is better)
Translates to: ASNKVSTADRCAEMTQNGGGFLM*LKSQGQ
Trigger: CTGACCCTGGCTCTTGAGTCACATAAGGAAACCACC...CCCATTTTGTGTCATTTCTGCACACCTGTCCGCTGTTGACACCTTATTAGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR TCA 90 bp GCCTCTAATAAGGTGTCAACAGCGGACAGGTGTGCAGAAATGACACAAAATGGGGACAAGCTGTGTAACTaGGCCCGGTTATGCCTGGAT +
Preference number: 2 (lower is better)
Translates to: ASNKVSTADRCAEMTQNGDKLCN*ARLCLD
Trigger: ATCCAGGCATAACCGGGCTCAGTTACACAGCTTGTC...CCCATTTTGTGTCATTTCTGCACACCTGTCCGCTGTTGACACCTTATTAGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR TCA 90 bp CTTTGTGCCCTTGTACTAAACTCCCGTGTCGTGTGGTATGACAACACCAGCATGGCTCACAAAATTGTATaGGGACCAACCACCGGCTTC +
Preference number: 2 (lower is better)
Translates to: LCALVLNSRVVWYDNTSMAHKIV*GPTTGF
Trigger: GAAGCCGGTGGTTGGTCCTCATACAATTTTGTGAGC...CATGCTGGTGTTGTCATACCACACGACACGGGAGTTTAGTACAAGGGCACAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR-3UTR GCA 90 bp ACTCAAGAGCATACTAAAGATTGGGCATTTCCCAAGTATGGTGAGCCAAGCTCCTATGGGCTTCCCAGCTaGAGGGAGTCACTGAAGGGT +
Preference number: 2 (lower is better)
Translates to: TQEHTKDWAFPKYGEPSSYGLPS*RESLKG
Trigger: ACCCTTCAGTGACTCCCTGCAGCTGGGAAGCCCATA...GGAGCTTGGCTCACCATACTTGGGAAATGCCCAATCTTTAGTATGCTCTTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
3UTR-3UTR GCA 90 bp TTCCCAAGTATGGTGAGCCAAGCTCCCTGTGATTCTTCTGGCACTAAAAGGGTTAAACCCAACAGAAGGTaGATCGCTGGCCTCTGTGAC +
Preference number: 2 (lower is better)
Translates to: FPSMVSQAPCDSSGTKRVKPNRR*IAGLCD
Trigger: GTCACAGAGGCCAGCGATGCACCTTCTGTTGGGTTT...AACCCTTTTAGTGCCAGAAGAATCACAGGGAGCTTGGCTCACCATACTTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
3UTR-3UTR GCA 90 bp GGCAGGATGTGCTTAAGCTGCCAAATGGCATCCCGATCACCTCCTCTCCAGGAAGATGCTGCAGGATTTTaGTGCAACAGGATCAAAACT +
Preference number: 2 (lower is better)
Translates to: GRMCLSCQMASRSPPLQEDAAGF*CNRIKT
Trigger: AGTTTTGATCCTGTTGCAGCAAAATCCTGCAGCATC...TTCCTGGAGAGGAGGTGATCGGGATGCCATTTGGCAGCTTAAGCACATCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR GCA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGGGGGTGCAGAATCTCTaGTGGCCCAGAAAAACCACA +
Preference number: 2 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLGVQNL*WPRKTT
Trigger: TGTGGTTTTTCTGGGCCAGCAGAGATTCTGCACCCC...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR GCA 90 bp GGAGGAGGGGCCAAGGGAGCTACTCAGTTGTCTATGATGCAGAGGTGTGAAAAACCAAAATGTAAAAGGTaGTCTGCCGCTGGGTCTCTT +
Preference number: 2 (lower is better)
Translates to: GGGAKGATQLSMMQRCEKPKCKR*SAAGSL
Trigger: AAGAGACCCAGCGGCAGAGCACCTTTTACATTTTGG...TTTTTCACACCTCTGCATCATAGACAACTGAGTAGCTCCCTTGGCCCCTCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR GCA 90 bp GGAGGAGGGGCCAAGGGAGCTACTCAGTTGTCTATGATGCAGAGGTGTGAAAAACAAGGCCACCCTGCTTaGCATGCTAGTCTAAATGAA +
Preference number: 2 (lower is better)
Translates to: GGGAKGATQLSMMQRCEKQGHPA*HASLNE
Trigger: TTCATTTAGACTAGCATGGCAAGCAGGGTGGCCTTG...TTTTTCACACCTCTGCATCATAGACAACTGAGTAGCTCCCTTGGCCCCTCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR CCA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGGTACATTGGTGGACTTaGGAGGGGGCATCCCAGATA +
Preference number: 2 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLVHWWT*EGASQI
Trigger: TATCTGGGATGCCCCCTCCCAAGTCCACCAATGTAC...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR CAA 90 bp AAGGACACTGCTTTGCAGGCTAGCACAACTAGAGTTCCTCAAGGTTaGGGGGAAGACCATACTCCACAAAGGCTTGGGAACATTCCACAT +
Preference number: 2 (lower is better)
Translates to: KDTALQASTTRVPQG*GEDHTPQRLGNIPH
Trigger: ATGTGGAATGTTCCCAAGCCTTTGTGGAGTATGGTCTTCCCCCAAACCTTGAGGAACTCTAGTTGTGCTAGCCTGCAAAGCAGTGTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320930.7
3UTR CAA 90 bp CAATGTTACAGCCTGGTTCCTGGAAAAAGAGCCTGCAAGCGTGCATaGCTAATTCCCATTCACACACTGACTTGGCGCAATTTGCTGTGC +
Preference number: 2 (lower is better)
Translates to: QCYSLVPGKRACKRA*LIPIHTLTWRNLLC
Trigger: GCACAGCAAATTGCGCCAAGTCAGTGTGTGAATGGGAATTAGCAATGCACGCTTGCAGGCTCTTTTTCCAGGAACCAGGCTGTAACATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR TCA 90 bp ATCAGGAAGAACTATGCCTGGAGCATATGCTTCCATCACCACATCAGTGACTTCCATCGCTGGCCTCTGTaGCATCCTTATGCTACATCC +
Preference number: 2 (lower is better)
Translates to: IRKNYAWSICFHHHISDFHRWPL*HPYATS
Trigger: GGATGTAGCATAAGGATGTCACAGAGGCCAGCGATG...GAAGTCACTGATGTGGTGATGGAAGCATATGCTCCAGGCATAGTTCTTCCTGAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
3UTR-3UTR GCA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCACCTCAAACCTCCCGCTaGTCTCACCATCAAGCCTAT +
Preference number: 2 (lower is better)
Translates to: LFSNPISLATQTGFICVAPQTSR*SHHQAY
Trigger: ATAGGCTTGATGGTGAGAGCAGCGGGAGGTTTGAGG...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR GCA 90 bp GGAGGAGGGGCCAAGGGAGCTACTCAGTTGTCTATGATGCAGAGGTGTGAAAAAAACAGCGGACAGGTGTaGAGAAATGACACAAAATGG +
Preference number: 2 (lower is better)
Translates to: GGGAKGATQLSMMQRCEKNSGQV*RNDTKW
Trigger: CCATTTTGTGTCATTTCTGCACACCTGTCCGCTGTT...TTTTTCACACCTCTGCATCATAGACAACTGAGTAGCTCCCTTGGCCCCTCCTCC
49% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR CCA 90 bp GGGCATTTCCCAAGTATGGTGAGCCAAGCTCCCTGTGATTCTTCTGGCACTAAAATCAAAGGTACTATCTaGGGAACTCCCTCCCTCATG +
Preference number: 2 (lower is better)
Translates to: GHFPSMVSQAPCDSSGTKIKGTI*GTPSLM
Trigger: CATGAGGGAGGGAGTTCCCCAGATAGTACCTTTGAT...TTTAGTGCCAGAAGAATCACAGGGAGCTTGGCTCACCATACTTGGGAAATGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
3UTR-3UTR CCA 90 bp GTGATGCTGACATTAACAAGAGGCAGTCACAGCAGTGTGTCTCACATGGGCTCCATTCACACACTGACTTaGCGCAATTTGCTGTGCTGT +
Preference number: 2 (lower is better)
Translates to: VMLTLTRGSHSSVSHMGSIHTLT*RNLLCC
Trigger: ACAGCACAGCAAATTGCGCCAAGTCAGTGTGTGAAT...GGAGCCCATGTGAGACACACTGCTGTGACTGCCTCTTGTTAATGTCAGCATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR CAA 90 bp GCTAATTCCCATTCACACACTGACTTGGCGCAATTTGCTGTGCTGTaGTATGCAATGATCTGCATCAATGACACTGGCCAAGGGAGAAGC +
Preference number: 2 (lower is better)
Translates to: ANSHSHTDLAQFAVL*YAMICINDTGQGRS
Trigger: GCTTCTCCCTTGGCCAGTGTCATTGATGCAGATCATTGCATACAACAGCACAGCAAATTGCGCCAAGTCAGTGTGTGAATGGGAATTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR CAA 90 bp AGTAAACAGGGTCTATGGTCAAGCAGCCCCATGGATCTGAAATTGTaGGAGCTGTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCT +
Preference number: 2 (lower is better)
Translates to: SKQGLWSSSPMDLKL*ELLNQAQTSFTGVP
Trigger: AGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAACAGCTCCAACAATTTCAGATCCATGGGGCTGCTTGACCATAGACCCTGTTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR CAA 90 bp TGGAGTAAACAGGGTCTATGGTCAAGCAGCCCCATGGATCTGAAATaGTTGGAGCTGTTAAACCAAGCACAGACCAGTTTCACTGGGGTA +
Preference number: 2 (lower is better)
Translates to: WSKQGLWSSSPMDLK*LELLNQAQTSFTGV
Trigger: TACCCCAGTGAAACTGGTCTGTGCTTGGTTTAACAGCTCCAACAATTTCAGATCCATGGGGCTGCTTGACCATAGACCCTGTTTACTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR TCA 90 bp GGAAGAACTATGCCTGGAGCATATGCTTCCATCACCACATCAGTGACTTCAGTCATTTCCCAAGTATGGTaGGCCAAGCTCCCTGTGATT +
Preference number: 2 (lower is better)
Translates to: GRTMPGAYASITTSVTSVISQVW*AKLPVI
Trigger: AATCACAGGGAGCTTGGCTCACCATACTTGGGAAAT...GACTGAAGTCACTGATGTGGTGATGGAAGCATATGCTCCAGGCATAGTTCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
3UTR-3UTR TCA 90 bp GGAGGAGGGGCCAAGGGAGCTACTCAGTTGTCTATGATGCAGAGGTGTGAAAAAGAAAAACCGTACCAATaGCTTATCTTACTGGAGGTG +
Preference number: 2 (lower is better)
Translates to: GGGAKGATQLSMMQRCEKEKPYQ*LILLEV
Trigger: CACCTCCAGTAAGATAAGTCATTGGTACGGTTTTTC...TTTTTCACACCTCTGCATCATAGACAACTGAGTAGCTCCCTTGGCCCCTCCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR TCA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGACAGGTGTGCAGAAATaGCACAAAATGGGCTTCCCA +
Preference number: 2 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLTGVQK*HKMGFP
Trigger: TGGGAAGCCCATTTTGTGTCATTTCTGCACACCTGT...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR GCA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGAGGATGTGCTTAAGCTaGCAAATGGCATCCCGATCA +
Preference number: 2 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLRMCLS*QMASRS
Trigger: TGATCGGGATGCCATTTGGCAGCTTAAGCACATCCT...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR GCA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCACAGCCACTTAAAGCCTaGTGGCAGGATGTGCTTAAG +
Preference number: 2 (lower is better)
Translates to: LFSNPISLATQTGFICVAQPLKA*WQDVLK
Trigger: CTTAAGCACATCCTGCCAGCAGGCTTTAAGTGGCTG...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR GCA 90 bp GGAGGAGGGGCCAAGGGAGCTACTCAGTTGTCTATGATGCAGAGGTGTGAAAAAGAGCTACCTTCTTTATaGCTTGTGGTCCAATGTATG +
Preference number: 2 (lower is better)
Translates to: GGGAKGATQLSMMQRCEKELPSL*LVVQCM
Trigger: CATACATTGGACCACAAGGCATAAAGAAGGTAGCTC...TTTTTCACACCTCTGCATCATAGACAACTGAGTAGCTCCCTTGGCCCCTCCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR CCA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGGCCACATGTGGAGGCTaGATCAGGAAGGAATTTAAG +
Preference number: 2 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLATCGG*IRKEFK
Trigger: CTTAAATTCCTTCCTGATCCAGCCTCCACATGTGGC...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR CCA 90 bp GCCTCTAATAAGGTGTCAACAGCGGACAGGTGTGCAGAAATGACACAAAATGGGTCAAAAGGCAACTGTTaGGCAGTAGGACCATCACCT +
Preference number: 2 (lower is better)
Translates to: ASNKVSTADRCAEMTQNGSKGNC*AVGPSP
Trigger: AGGTGATGGTCCTACTGCCCAACAGTTGCCTTTTGA...CCCATTTTGTGTCATTTCTGCACACCTGTCCGCTGTTGACACCTTATTAGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR CAA 90 bp CTAGAGTTCCTCAAGGTTTGGGGGAAGACCATACTCCACAAAGGCTaGGGAACATTCCACATCAGTCTCCACCCGCCAAATAAAATACTA +
Preference number: 2 (lower is better)
Translates to: LEFLKVWGKTILHKG*GTFHISLHPPNKIL
Trigger: TAGTATTTTATTTGGCGGGTGGAGACTGATGTGGAATGTTCCCAAGCCTTTGTGGAGTATGGTCTTCCCCCAAACCTTGAGGAACTCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320930.7
3UTR-3UTR GCA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCAGGAGGGGAGACTGCATaGCATCTGATATTCAATTCC +
Preference number: 2 (lower is better)
Translates to: LFSNPISLATQTGFICVAGGETA*HLIFNS
Trigger: GGAATTGAATATCAGATGGCATGCAGTCTCCCCTCC...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR GCA 90 bp GGAGGAGGGGCCAAGGGAGCTACTCAGTTGTCTATGATGCAGAGGTGTGAAAAATTGTATGCAATGATCTaGATCAATGACACTGGCCAA +
Preference number: 2 (lower is better)
Translates to: GGGAKGATQLSMMQRCEKLYAMI*INDTGQ
Trigger: TTGGCCAGTGTCATTGATGCAGATCATTGCATACAA...TTTTTCACACCTCTGCATCATAGACAACTGAGTAGCTCCCTTGGCCCCTCCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR CCA 90 bp GGCAGGATGTGCTTAAGCTGCCAAATGGCATCCCGATCACCTCCTCTCCAGGAAATTGATCCGTTCTTTTaGTTGTCTTCAGAGTTAAGT +
Preference number: 2 (lower is better)
Translates to: GRMCLSCQMASRSPPLQEIDPFF*LSSELS
Trigger: ACTTAACTCTGAAGACAACCAAAAGAACGGATCAAT...TTCCTGGAGAGGAGGTGATCGGGATGCCATTTGGCAGCTTAAGCACATCCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR CCA 90 bp GTGATGCTGACATTAACAAGAGGCAGTCACAGCAGTGTGTCTCACATGGGCTCCAACAAAGCATTGATCTaGAAGTTCAGTAGATTGCCC +
Preference number: 2 (lower is better)
Translates to: VMLTLTRGSHSSVSHMGSNKALI*KFSRLP
Trigger: GGGCAATCTACTGAACTTCCAGATCAATGCTTTGTT...GGAGCCCATGTGAGACACACTGCTGTGACTGCCTCTTGTTAATGTCAGCATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR CAA 90 bp AAGAGCCTGCAAGCGTGCATTGCTAATTCCCATTCACACACTGACTaGGCGCAATTTGCTGTGCTGTTGTATGCAATGATCTGCATCAAT +
Preference number: 2 (lower is better)
Translates to: KSLQACIANSHSHTD*AQFAVLLYAMICIN
Trigger: ATTGATGCAGATCATTGCATACAACAGCACAGCAAATTGCGCCAAGTCAGTGTGTGAATGGGAATTAGCAATGCACGCTTGCAGGCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR TCA 90 bp AAGCACACCCAAGGCTGTGCTTGCTCAGGTATTACATTTTCTCCTGGGAGTTGGACTTGTTCTCCAGGATaGAGTTTATGGCTATTTGTC +
Preference number: 2 (lower is better)
Translates to: KHTQGCACSGITFSPGSWTCSPG*SLWLFV
Trigger: GACAAATAGCCATAAACTTCATCCTGGAGAACAAGT...CCAACTCCCAGGAGAAAATGTAATACCTGAGCAAGCACAGCCTTGGGTGTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR TCA 90 bp GGAGGAGGGGCCAAGGGAGCTACTCAGTTGTCTATGATGCAGAGGTGTGAAAAATTGCAGATTTCTTTATaGGGTCAAAGTAGCAGACAT +
Preference number: 2 (lower is better)
Translates to: GGGAKGATQLSMMQRCEKLQISL*GQSSRH
Trigger: ATGTCTGCTACTTTGACCTCATAAAGAAATCTGCAA...TTTTTCACACCTCTGCATCATAGACAACTGAGTAGCTCCCTTGGCCCCTCCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR GCA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCATCATCCTACTTCACATaGCTATCAGCCAAGGTCATG +
Preference number: 2 (lower is better)
Translates to: LFSNPISLATQTGFICVASSYFT*LSAKVM
Trigger: CATGACCTTGGCTGATAGGCATGTGAAGTAGGATGA...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR CCA 90 bp AGAATTGATCAAGAGATTCTCAGTTCTCAATATCAGGAAGAACTATGCCTGGAGAACCAATCTCCAGGTTaGTGGTGGGAGGAGGCAGGA +
Preference number: 2 (lower is better)
Translates to: RIDQEILSSQYQEELCLENQSPG*WWEEAG
Trigger: TCCTGCCTCCTCCCACCACCAACCTGGAGATTGGTT...CTCCAGGCATAGTTCTTCCTGATATTGAGAACTGAGAATCTCTTGATCAATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
3UTR-3UTR CCA 90 bp ACTCAAGAGCATACTAAAGATTGGGCATTTCCCAAGTATGGTGAGCCAAGCTCCTACTCCACAAAGGCTTaGGAACATTCCACATCAGTC +
Preference number: 2 (lower is better)
Translates to: TQEHTKDWAFPKYGEPSSYSTKA*EHSTSV
Trigger: GACTGATGTGGAATGTTCCCAAGCCTTTGTGGAGTA...GGAGCTTGGCTCACCATACTTGGGAAATGCCCAATCTTTAGTATGCTCTTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
3UTR-3UTR CCA 90 bp GGAGGAGGGGCCAAGGGAGCTACTCAGTTGTCTATGATGCAGAGGTGTGAAAAAATTCCTCAACCATACTaGCAATTTGTTTTGGCTAGA +
Preference number: 2 (lower is better)
Translates to: GGGAKGATQLSMMQRCEKIPQPY*QFVLAR
Trigger: TCTAGCCAAAACAAATTGCCAGTATGGTTGAGGAAT...TTTTTCACACCTCTGCATCATAGACAACTGAGTAGCTCCCTTGGCCCCTCCTCC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR GCA 90 bp GGAGGAGGGGCCAAGGGAGCTACTCAGTTGTCTATGATGCAGAGGTGTGAAAAAATTAGGATATGGTGCTaGTTTCATTACTGGATCTAT +
Preference number: 2 (lower is better)
Translates to: GGGAKGATQLSMMQRCEKIRIWC*FHYWIY
Trigger: ATAGATCCAGTAATGAAAGCAGCACCATATCCTAAT...TTTTTCACACCTCTGCATCATAGACAACTGAGTAGCTCCCTTGGCCCCTCCTCC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR GCA 90 bp GCCTCTAATAAGGTGTCAACAGCGGACAGGTGTGCAGAAATGACACAAAATGGGATCATAGAGAAAATGTaGAATCCCAGGCCAATAAGC +
Preference number: 2 (lower is better)
Translates to: ASNKVSTADRCAEMTQNGIIEKM*NPRPIS
Trigger: GCTTATTGGCCTGGGATTGCACATTTTCTCTATGAT...CCCATTTTGTGTCATTTCTGCACACCTGTCCGCTGTTGACACCTTATTAGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR CCA 90 bp GTGAGCCAAGCTCCCTGTGATTCTTCTGGCACTAAAAGGGTTTACTTTGAATCAGGTTTCACTGGTTCCTaGGAATTACTACTTGCCTCT +
Preference number: 2 (lower is better)
Translates to: VSQAPCDSSGTKRVYFESGFTGS*ELLLAS
Trigger: AGAGGCAAGTAGTAATTCCCAGGAACCAGTGAAACC...TGATTCAAAGTAAACCCTTTTAGTGCCAGAAGAATCACAGGGAGCTTGGCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
3UTR CAA 90 bp TCAATACAAGATCAAGGGCACTCACATTTGCCTAATACAGATGCCTaGAATTTCCACGGAAAAGCTGTCCACGATACGACCATGGCAAAA +
Preference number: 2 (lower is better)
Translates to: SIQDQGHSHLPNTDA*NFHGKAVHDTTMAK
Trigger: TTTTGCCATGGTCGTATCGTGGACAGCTTTTCCGTGGAAATTCAAGGCATCTGTATTAGGCAAATGTGAGTGCCCTTGATCTTGTATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR TCA 90 bp TGTTTTCAATGGAAATGGAAGCCTTCCAAATATTATGCAGAACACAATCTCAGTGTGCCTGAAGGAGGCTaGGAAGAGGTTTGCAGCTTC +
Preference number: 2 (lower is better)
Translates to: CFQWKWKPSKYYAEHNLSVPEGG*EEVCSF
Trigger: GAAGCTGCAAACCTCTTCTCAGCCTCCTTCAGGCAC...ACTGAGATTGTGTTCTGCATAATATTTGGAAGGCTTCCATTTCCATTGAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR GCA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGATAAACATCCACTTCTaGTTGGCCACACTTTTTCTT +
Preference number: 2 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLINIHF*LATLFL
Trigger: AAGAAAAAGTGTGGCCAAGCAGAAGTGGATGTTTAT...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR GCA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGTGGTTTCATCTGTGTTaGAGATTTCTTTATGAGGTC +
Preference number: 2 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLWFHLC*RFLYEV
Trigger: GACCTCATAAAGAAATCTGCAACACAGATGAAACCA...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR CCA 90 bp ATCAGGAAGAACTATGCCTGGAGCATATGCTTCCATCACCACATCAGTGACTTCGAGCATACTAAAGATTaGGCATTTCCCAAGTATGGT +
Preference number: 2 (lower is better)
Translates to: IRKNYAWSICFHHHISDFEHTKD*AFPKYG
Trigger: ACCATACTTGGGAAATGCCCAATCTTTAGTATGCTC...GAAGTCACTGATGTGGTGATGGAAGCATATGCTCCAGGCATAGTTCTTCCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
3UTR-3UTR TCA 90 bp ATTATGGAAAAACCTACTGAACCACCCAACTTTGATCTGTTCATGTCTATCAATCAACCACCGGCTTCCTaGGGGATTTGCAATCTACCT +
Preference number: 2 (lower is better)
Translates to: IMEKPTEPPNFDLFMSINQPPAS*GICNLP
Trigger: AGGTAGATTGCAAATCCCTCAGGAAGCCGGTGGTTG...ATTGATAGACATGAACAGATCAAAGTTGGGTGGTTCAGTAGGTTTTTCCATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR-3UTR GCA 90 bp TGTTTTCAATGGAAATGGAAGCCTTCCAAATATTATGCAGAACACAATCTCAGTGGGGTGCAGAATCTCTaGTGGCCCAGAAAAACCACA +
Preference number: 2 (lower is better)
Translates to: CFQWKWKPSKYYAEHNLSGVQNL*WPRKTT
Trigger: TGTGGTTTTTCTGGGCCAGCAGAGATTCTGCACCCC...ACTGAGATTGTGTTCTGCATAATATTTGGAAGGCTTCCATTTCCATTGAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR TCA 90 bp GAAAGACACCATCATCAACATAAGGATTCAAAAGGCAACTGTTGGGCAGTAGGAACTTGTTCTCCAGGATaGAGTTTATGGCTATTTGTC +
Preference number: 2 (lower is better)
Translates to: ERHHHQHKDSKGNCWAVGTCSPG*SLWLFV
Trigger: GACAAATAGCCATAAACTTCATCCTGGAGAACAAGT...TCCTACTGCCCAACAGTTGCCTTTTGAATCCTTATGTTGATGATGGTGTCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR GCA 90 bp TGTTTTCAATGGAAATGGAAGCCTTCCAAATATTATGCAGAACACAATCTCAGTGTCCTCCACCTCCAGTaGCATCATTTCCATGTGTCT +
Preference number: 2 (lower is better)
Translates to: CFQWKWKPSKYYAEHNLSVLHLQ*HHFHVS
Trigger: AGACACATGGAAATGATGGCACTGGAGGTGGAGGAC...ACTGAGATTGTGTTCTGCATAATATTTGGAAGGCTTCCATTTCCATTGAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR GCA 90 bp GAAAGACACCATCATCAACATAAGGATTCAAAAGGCAACTGTTGGGCAGTAGGATCGGCTTTTCTGTTTTaGTTGTCTCGTTCCTTCATT +
Preference number: 2 (lower is better)
Translates to: ERHHHQHKDSKGNCWAVGSAFLF*LSRSFI
Trigger: AATGAAGGAACGAGACAAGCAAAACAGAAAAGCCGA...TCCTACTGCCCAACAGTTGCCTTTTGAATCCTTATGTTGATGATGGTGTCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR GCA 90 bp TGTTTTCAATGGAAATGGAAGCCTTCCAAATATTATGCAGAACACAATCTCAGTCCACAGTGGCAGCCCTaGTTACCTTCACTGATTTCT +
Preference number: 2 (lower is better)
Translates to: CFQWKWKPSKYYAEHNLSPQWQP*LPSLIS
Trigger: AGAAATCAGTGAAGGTAAGCAGGGCTGCCACTGTGG...ACTGAGATTGTGTTCTGCATAATATTTGGAAGGCTTCCATTTCCATTGAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR CCA 90 bp TATGACAACACCAGCATGTCTGTGCAGATTCTTCTCCAGGAGGGCTTTAGAAGTAAAGTTAAGTGCGTTTaGACTAAACAAAGCAAAAGG +
Preference number: 2 (lower is better)
Translates to: YDNTSMSVQILLQEGFRSKVKCV*TKQSKR
Trigger: CCTTTTGCTTTGTTTAGTCCAAACGCACTTAACTTT...ACTTCTAAAGCCCTCCTGGAGAAGAATCTGCACAGACATGCTGGTGTTGTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR CAA 90 bp ACAGTCATCAAATATTTCTGCAATGTTCCCTTAAATAGTTTTCCATaGTTCCTGCGGCTTAATGAGGGACTTCTTAAAGAAGGCATGGGG +
Preference number: 2 (lower is better)
Translates to: TVIKYFCNVPLNSFP*FLRLNEGLLKEGMG
Trigger: CCCCATGCCTTCTTTAAGAAGTCCCTCATTAAGCCGCAGGAACAATGGAAAACTATTTAAGGGAACATTGCAGAAATATTTGATGACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR CAA 90 bp AACATCATAGAGAAAATGTGCAATCCCAGGCCAATAAGCAAATCTTaGCCCAAAATAAACATATTTCTTCTGCTACATCTCACTGCGGCC +
Preference number: 2 (lower is better)
Translates to: NIIEKMCNPRPISKS*PKINIFLLLHLTAA
Trigger: GGCCGCAGTGAGATGTAGCAGAAGAAATATGTTTATTTTGGGCAAAGATTTGCTTATTGGCCTGGGATTGCACATTTTCTCTATGATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR TCA 90 bp CGACTTTTGACATCCTTGAGTTTGGGCAGAATTTCTAAGCTATATCCATCGGCTTTCCAAAAGCCAAGATaGGAGCTAAAATATCCTTCA +
Preference number: 2 (lower is better)
Translates to: RLLTSLSLGRISKLYPSAFQKPR*ELKYPS
Trigger: TGAAGGATATTTTAGCTCTCATCTTGGCTTTTGGAA...AGCCGATGGATATAGCTTAGAAATTCTGCCCAAACTCAAGGATGTCAAAAGTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558711.1
3UTR CAA 90 bp ATCTCAAGATTCAACTGCCAGTGTGTTCTCAATCACTGGAGTAATTaGATATTATGGAAAAACCTACTGAACCACCCAACTTTGATCTGT +
Preference number: 2 (lower is better)
Translates to: ISRFNCQCVLNHWSN*ILWKNLLNHPTLIC
Trigger: ACAGATCAAAGTTGGGTGGTTCAGTAGGTTTTTCCATAATATCAAATTACTCCAGTGATTGAGAACACACTGGCAGTTGAATCTTGAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR CAA 90 bp AATTACCTAGAACATCCTTATGCTTTCTTTACTGCTGTGTCTGAATaGCTCTGCTCAGATGAAACAATCATTTTCCACCCTTATGCTGTT +
Preference number: 2 (lower is better)
Translates to: NYLEHPYAFFTAVSE*LCSDETIIFHPYAV
Trigger: AACAGCATAAGGGTGGAAAATGATTGTTTCATCTGAGCAGAGCAATTCAGACACAGCAGTAAAGAAAGCATAAGGATGTTCTAGGTAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR-3UTR TCA 90 bp TGTTTTCAATGGAAATGGAAGCCTTCCAAATATTATGCAGAACACAATCTCAGTGAAAAACCGTACCAATaGCTTATCTTACTGGAGGTG +
Preference number: 2 (lower is better)
Translates to: CFQWKWKPSKYYAEHNLSEKPYQ*LILLEV
Trigger: CACCTCCAGTAAGATAAGTCATTGGTACGGTTTTTC...ACTGAGATTGTGTTCTGCATAATATTTGGAAGGCTTCCATTTCCATTGAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR GCA 90 bp TGTTTTCAATGGAAATGGAAGCCTTCCAAATATTATGCAGAACACAATCTCAGTCTGATGTCAACTCCTTaGATGGTAACTTGTTCTCCA +
Preference number: 2 (lower is better)
Translates to: CFQWKWKPSKYYAEHNLSLMSTP*MVTCSP
Trigger: TGGAGAACAAGTTACCATGCAAGGAGTTGACATCAG...ACTGAGATTGTGTTCTGCATAATATTTGGAAGGCTTCCATTTCCATTGAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR CAA 90 bp TTTAGTCTGGATAATACATGTTCTTGGACCTCTTCAAGAATAGTTTaGGTGAGTTGCAACATTATTGGAGAGAAAGATGCTGCAGGATTT +
Preference number: 2 (lower is better)
Translates to: FSLDNTCSWTSSRIV*VSCNIIGEKDAAGF
Trigger: AAATCCTGCAGCATCTTTCTCTCCAATAATGTTGCAACTCACCAAAACTATTCTTGAAGAGGTCCAAGAACATGTATTATCCAGACTAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR CAA 90 bp GCAAACAGAAGAATTGATACTAGACTTTCCCTCTCACTCATGGATTaGTTTTCAATGGAAATGGAAGCCTTCCAAATATTATGCAGAACA +
Preference number: 2 (lower is better)
Translates to: ANRRIDTRLSLSLMD*FSMEMEAFQILCRT
Trigger: TGTTCTGCATAATATTTGGAAGGCTTCCATTTCCATTGAAAACAAATCCATGAGTGAGAGGGAAAGTCTAGTATCAATTCTTCTGTTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR CAA 90 bp AGAGAGTTAGGTTGCTTTAAAGTTGGCCATGCATTAAATAAAGCTTaGTCTCACAAAAGTGAACGAGTAACTGATACGGTATCTGTACAT +
Preference number: 2 (lower is better)
Translates to: RELGCFKVGHALNKA*SHKSERVTDTVSVH
Trigger: ATGTACAGATACCGTATCAGTTACTCGTTCACTTTTGTGAGACAAAGCTTTATTTAATGCATGGCCAACTTTAAAGCAACCTAACTCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR-3UTR GCA 90 bp TGTTTTCAATGGAAATGGAAGCCTTCCAAATATTATGCAGAACACAATCTCAGTCTGGCACTTTTCTTGTaGATGATAACACTAGAAGGA +
Preference number: 2 (lower is better)
Translates to: CFQWKWKPSKYYAEHNLSLALFL*MITLEG
Trigger: TCCTTCTAGTGTTATCATGCACAAGAAAAGTGCCAG...ACTGAGATTGTGTTCTGCATAATATTTGGAAGGCTTCCATTTCCATTGAAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR GCA 90 bp TGTTTTCAATGGAAATGGAAGCCTTCCAAATATTATGCAGAACACAATCTCAGTGAGGCAGGCAAACCTTaGTTTGTAGAAATAGGTATT +
Preference number: 2 (lower is better)
Translates to: CFQWKWKPSKYYAEHNLSEAGKP*FVEIGI
Trigger: AATACCTATTTCTACAAAGCAAGGTTTGCCTGCCTC...ACTGAGATTGTGTTCTGCATAATATTTGGAAGGCTTCCATTTCCATTGAAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR GCA 90 bp TGGGTTAAACAGAAGTTTAGCCCTATGCTACTTCTATGCTTCAATTACCTAGAAGTGTCTGAATTGCTCTaGTCAGATGAAACAATCATT +
Preference number: 2 (lower is better)
Translates to: WVKQKFSPMLLLCFNYLEVSELL*SDETII
Trigger: AATGATTGTTTCATCTGAGCAGAGCAATTCAGACAC...TTCTAGGTAATTGAAGCATAGAAGTAGCATAGGGCTAAACTTCTGTTTAACCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR-3UTR CCA 90 bp TGTTTTCAATGGAAATGGAAGCCTTCCAAATATTATGCAGAACACAATCTCAGTATTGATCCGTTCTTTTaGTTGTCTTCAGAGTTAAGT +
Preference number: 2 (lower is better)
Translates to: CFQWKWKPSKYYAEHNLSIDPFF*LSSELS
Trigger: ACTTAACTCTGAAGACAACCAAAAGAACGGATCAAT...ACTGAGATTGTGTTCTGCATAATATTTGGAAGGCTTCCATTTCCATTGAAAACA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR GCA 72 bp GACCGGCGGCACCTCCCTGCTGAGGGCTGCGGGTCCTaGCCAGCAGCTGCCTCCACACCACTCAGCCTCCCT +
Preference number: 3 (lower is better)
Translates to: DRRHLPAEGCGS*PAAASTPLSLP
Trigger: AGGGAGGCTGAGTGGTGTGGAGGCAGCTGCTGGGCAGGACCCGCAGCCCTCAGCAGGGAGGTGCCGCCGGTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR GCA 72 bp GTCACTATGGACCGGCGGCACCTCCCTGCTGAGGGCTaGGGGTCCTGCCCAGCAGCTGCCTCCACACCACTC +
Preference number: 3 (lower is better)
Translates to: VTMDRRHLPAEG*GSCPAAASTPL
Trigger: GAGTGGTGTGGAGGCAGCTGCTGGGCAGGACCCGCAGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR CCA 72 bp TTGTGTGCCCTCAGTTCCCAGCCTGGCATGTCACTATaGACCGGCGGCACCTCCCTGCTGAGGGCTGCGGGT +
Preference number: 3 (lower is better)
Translates to: LCALSSQPGMSL*TGGTSLLRAAG
Trigger: ACCCGCAGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACATGCCAGGCTGGGAACTGAGGGCACACAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR-3UTR CAA 90 bp ATGTCACTATGGACCGGCGGCACCTCCCTGCTGAGGGCTGCGGGTCCTGCCCAGCTTGCCCCTTCAGGCTaGGGTGTGGTAAAAGCTTCT +
Preference number: 3 (lower is better)
Translates to: MSLWTGGTSLLRAAGPAQLAPSG*GVVKAS
Trigger: AGAAGCTTTTACCACACCCAAGCCTGAAGGGGCAAG...CTGGGCAGGACCCGCAGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR CCA 72 bp GCATTCCTGAGGGGCTGCTGGCTGGCAGGCATATCCTaGGAAGATGCTCAGGCACCTGGCAAGTCCAGGGGT +
Preference number: 3 (lower is better)
Translates to: AFLRGCWLAGIS*EDAQAPGKSRG
Trigger: ACCCCTGGACTTGCCAGGTGCCTGAGCATCTTCCCAGGATATGCCTGCCAGCCAGCAGCCCCTCAGGAATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR TCA 72 bp GCAGTCACAGCAGTGTGTCTCACATGGGCTCCTTGGTaGCAGCGGAGCTCCCTGTCCAAACGGCTGAGGAAC +
Preference number: 3 (lower is better)
Translates to: AVTAVCLTWAPW*QRSSLSKRLRN
Trigger: GTTCCTCAGCCGTTTGGACAGGGAGCTCCGCTGTCACCAAGGAGCCCATGTGAGACACACTGCTGTGACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR CCA 72 bp AGAAGAGATCAGGTTGTGTGCCCTCAGTTCCCAGCCTaGCATGTCACTATGGACCGGCGGCACCTCCCTGCT +
Preference number: 3 (lower is better)
Translates to: RRDQVVCPQFPA*HVTMDRRHLPA
Trigger: AGCAGGGAGGTGCCGCCGGTCCATAGTGACATGCCAGGCTGGGAACTGAGGGCACACAACCTGATCTCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR CCA 72 bp GAGTTGCATTTGCTCTCCTGTCTGGAAACTGCCTCCTaGGGATGGGGGTCGTCCAGCTGCACAGTCACAGCA +
Preference number: 3 (lower is better)
Translates to: ELHLLSCLETAS*GWGSSSCTVTA
Trigger: TGCTGTGACTGTGCAGCTGGACGACCCCCATCCCCAGGAGGCAGTTTCCAGACAGGAGAGCAAATGCAACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR GCA 72 bp GGACCAGAGAGTGGGATGAGAAGAGATCAGGTTGTGTaGCCTCAGTTCCCAGCCTGGCATGTCACTATGGAC +
Preference number: 3 (lower is better)
Translates to: GPESGMRRDQVV*PQFPAWHVTMD
Trigger: GTCCATAGTGACATGCCAGGCTGGGAACTGAGGGCACACAACCTGATCTCTTCTCATCCCACTCTCTGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR CCA 72 bp GGAGGGCTATGCCTAGAACAGCCACTTAAAGCCTGCTaGCAGGATGTGCTTAAGCTGCCAAATGGCATCCCG +
Preference number: 3 (lower is better)
Translates to: GGLCLEQPLKAC*QDVLKLPNGIP
Trigger: CGGGATGCCATTTGGCAGCTTAAGCACATCCTGCCAGCAGGCTTTAAGTGGCTGTTCTAGGCATAGCCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR TCA 72 bp CCAATGGGAATGACGATGAGGGACCAGAGAGTGGGATaGGAAGAGATCAGGTTGTGTGCCCTCAGTTCCCAG +
Preference number: 3 (lower is better)
Translates to: PMGMTMRDQRVG*EEIRLCALSSQ
Trigger: CTGGGAACTGAGGGCACACAACCTGATCTCTTCTCATCCCACTCTCTGGTCCCTCATCGTCATTCCCATTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR GCA 72 bp GCCGCTGGGTCTCTTGTCCAAGCACACCCAAGGCTGTaGTTGCTCAGGTATTACATTTTCTCCTGGGAGTTG +
Preference number: 3 (lower is better)
Translates to: AAGSLVQAHPRL*LLRYYIFSWEL
Trigger: CAACTCCCAGGAGAAAATGTAATACCTGAGCAAGCACAGCCTTGGGTGTGCTTGGACAAGAGACCCAGCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR GCA 72 bp CAGGGAGGGCTATGCCTAGAACAGCCACTTAAAGCCTaGTGGCAGGATGTGCTTAAGCTGCCAAATGGCATC +
Preference number: 3 (lower is better)
Translates to: QGGLCLEQPLKA*WQDVLKLPNGI
Trigger: GATGCCATTTGGCAGCTTAAGCACATCCTGCCAGCAGGCTTTAAGTGGCTGTTCTAGGCATAGCCCTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR CCA 72 bp CAAGTGGCTCCCAGTCTGCTGACTTCTCTTTGGGTTTaGCCAATGGGAATGACGATGAGGGACCAGAGAGTG +
Preference number: 3 (lower is better)
Translates to: QVAPSLLTSLWV*PMGMTMRDQRV
Trigger: CACTCTCTGGTCCCTCATCGTCATTCCCATTGGCCAAACCCAAAGAGAAGTCAGCAGACTGGGAGCCACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR TCA 72 bp CACATGCCTATCAGCCAAGGTCATGAGCAGGTGCTGTaGGTTGCATTTGCTCTCCTGTCTGGAAACTGCCTC +
Preference number: 3 (lower is better)
Translates to: HMPISQGHEQVL*VAFALLSGNCL
Trigger: GAGGCAGTTTCCAGACAGGAGAGCAAATGCAACTCACAGCACCTGCTCATGACCTTGGCTGATAGGCATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR GCA 72 bp CAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATaGGTGCAAGGTCCTCCACCTCCAGTGCCATCATTT +
Preference number: 3 (lower is better)
Translates to: QERPATLWSQRV*VQGPPPPVPSF
Trigger: AAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
3UTR GCA 72 bp CTGGGTCTCTTGTCCAAGCACACCCAAGGCTGTGCTTaGTCAGGTATTACATTTTCTCCTGGGAGTTGGGGT +
Preference number: 3 (lower is better)
Translates to: LGLLSKHTQGCA*SGITFSPGSWG
Trigger: ACCCCAACTCCCAGGAGAAAATGTAATACCTGAGCAAGCACAGCCTTGGGTGTGCTTGGACAAGAGACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR CAA 90 bp GTGATGCTGACATTAACAAGAGGCAGTCACAGCAGTGTGTCTCACATGGGCTCCTGGAAGTTCAGTAGATaGCCCATTCCTTGGGAAGGG +
Preference number: 3 (lower is better)
Translates to: VMLTLTRGSHSSVSHMGSWKFSR*PIPWEG
Trigger: CCCTTCCCAAGGAATGGGCAATCTACTGAACTTCCA...GGAGCCCATGTGAGACACACTGCTGTGACTGCCTCTTGTTAATGTCAGCATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR CCA 72 bp GAAGAGGTTCCCCGGTCAATGTTACAGCCTGGTTCCTaGAAAAAGAGCCTGCAAGCGTGCATTGCTAATTCC +
Preference number: 3 (lower is better)
Translates to: EEVPRSMLQPGS*KKSLQACIANS
Trigger: GGAATTAGCAATGCACGCTTGCAGGCTCTTTTTCCAGGAACCAGGCTGTAACATTGACCGGGGAACCTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR CAA 90 bp GGAGGAGGGGCCAAGGGAGCTACTCAGTTGTCTATGATGCAGAGGTGTGAAAAAGAAGTTTATGGCTATTaGTCTCCCTCTCTCCACCCA +
Preference number: 3 (lower is better)
Translates to: GGGAKGATQLSMMQRCEKEVYGY*SPSLHP
Trigger: TGGGTGGAGAGAGGGAGACAAATAGCCATAAACTTC...TTTTTCACACCTCTGCATCATAGACAACTGAGTAGCTCCCTTGGCCCCTCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR CAA 90 bp GGAGGAGGGGCCAAGGGAGCTACTCAGTTGTCTATGATGCAGAGGTGTGAAAAACACCCAAGGCTGTGCTaGCTCAGGTATTACATTTTC +
Preference number: 3 (lower is better)
Translates to: GGGAKGATQLSMMQRCEKHPRLC*LRYYIF
Trigger: GAAAATGTAATACCTGAGCAAGCACAGCCTTGGGTG...TTTTTCACACCTCTGCATCATAGACAACTGAGTAGCTCCCTTGGCCCCTCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR CAA 90 bp GTGATGCTGACATTAACAAGAGGCAGTCACAGCAGTGTGTCTCACATGGGCTCCTGCTGTGAGTTGCATTaGCTCTCCTGTCTGGAAACT +
Preference number: 3 (lower is better)
Translates to: VMLTLTRGSHSSVSHMGSCCELH*LSCLET
Trigger: AGTTTCCAGACAGGAGAGCAAATGCAACTCACAGCA...GGAGCCCATGTGAGACACACTGCTGTGACTGCCTCTTGTTAATGTCAGCATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR CAA 90 bp GGAGGAGGGGCCAAGGGAGCTACTCAGTTGTCTATGATGCAGAGGTGTGAAAAACAAGGGCACTCACATTaGCCTAATACAGATGCCTTG +
Preference number: 3 (lower is better)
Translates to: GGGAKGATQLSMMQRCEKQGHSH*PNTDAL
Trigger: CAAGGCATCTGTATTAGGCAAATGTGAGTGCCCTTG...TTTTTCACACCTCTGCATCATAGACAACTGAGTAGCTCCCTTGGCCCCTCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR GCA 72 bp TTACAGCCTGGTTCCTGGAAAAAGAGCCTGCAAGCGTaGATTGCTAATTCCCATTCACACACTGACTTGGCG +
Preference number: 3 (lower is better)
Translates to: LQPGSWKKSLQA*IANSHSHTDLA
Trigger: CGCCAAGTCAGTGTGTGAATGGGAATTAGCAATGCACGCTTGCAGGCTCTTTTTCCAGGAACCAGGCTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR CCA 72 bp CTTTGCAGGCTAGCACAACTAGAGTTCCTCAAGGTTTaGGGGAAGACCATACTCCACAAAGGCTTGGGAACA +
Preference number: 3 (lower is better)
Translates to: LCRLAQLEFLKV*GKTILHKGLGT
Trigger: TGTTCCCAAGCCTTTGTGGAGTATGGTCTTCCCCCAAACCTTGAGGAACTCTAGTTGTGCTAGCCTGCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
3UTR CCA 72 bp TGTGCTTGCTCAGGTATTACATTTTCTCCTGGGAGTTaGGGTGCAGAATCTCTGCTGGCCCAGAAAAACCAC +
Preference number: 3 (lower is better)
Translates to: CACSGITFSPGS*GAESLLAQKNH
Trigger: GTGGTTTTTCTGGGCCAGCAGAGATTCTGCACCCCAACTCCCAGGAGAAAATGTAATACCTGAGCAAGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR CCA 72 bp GTCAACAGCGGACAGGTGTGCAGAAATGACACAAAATaGGCTTCCCAGTCACAGACAAGCTGTGTAACTGAG +
Preference number: 3 (lower is better)
Translates to: VNSGQVCRNDTK*ASQSQTSCVTE
Trigger: CTCAGTTACACAGCTTGTCTGTGACTGGGAAGCCCATTTTGTGTCATTTCTGCACACCTGTCCGCTGTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR CCA 72 bp GTTGGAGCTGTTAAACCAAGCACAGACCAGTTTCACTaGGGTACCTGCTTTCCCAGTACATTGGCACTGATC +
Preference number: 3 (lower is better)
Translates to: VGAVKPSTDQFH*GTCFPSTLALI
Trigger: GATCAGTGCCAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAACAGCTCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR CAA 90 bp TTCCCAAGTATGGTGAGCCAAGCTCCCTGTGATTCTTCTGGCACTAAAAGGGTTGGAGAAAGGTGGGAGTaGGGTTCAGATAAAGGGACA +
Preference number: 3 (lower is better)
Translates to: FPSMVSQAPCDSSGTKRVGERWE*GSDKGT
Trigger: TGTCCCTTTATCTGAACCCAACTCCCACCTTTCTCC...AACCCTTTTAGTGCCAGAAGAATCACAGGGAGCTTGGCTCACCATACTTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
3UTR-3UTR CAA 90 bp GCCTCTAATAAGGTGTCAACAGCGGACAGGTGTGCAGAAATGACACAAAATGGGTTCAAAAGGCAACTGTaGGGCAGTAGGACCATCACC +
Preference number: 3 (lower is better)
Translates to: ASNKVSTADRCAEMTQNGFKRQL*GSRTIT
Trigger: GGTGATGGTCCTACTGCCCAACAGTTGCCTTTTGAA...CCCATTTTGTGTCATTTCTGCACACCTGTCCGCTGTTGACACCTTATTAGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR TCA 72 bp CCATTCTTCATGGTGCTTATGAAAACAGGAGGTGCCTaGAGGAGGCTGAGAAGAGGTTTGCAGCTTCTACTG +
Preference number: 3 (lower is better)
Translates to: PFFMVLMKTGGA*RRLRRGLQLLL
Trigger: CAGTAGAAGCTGCAAACCTCTTCTCAGCCTCCTTCAGGCACCTCCTGTTTTCATAAGCACCATGAAGAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR TCA 72 bp CTGACTTGGCGCAATTTGCTGTGCTGTTGTATGCAATaGTCTGCATCAATGACACTGGCCAAGGGAGAAGCA +
Preference number: 3 (lower is better)
Translates to: LTWRNLLCCCMQ*SASMTLAKGEA
Trigger: TGCTTCTCCCTTGGCCAGTGTCATTGATGCAGATCATTGCATACAACAGCACAGCAAATTGCGCCAAGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR TCA 72 bp AATATCCTTCACGCTCTTCACGTGCAGCAAGTCCTGTaGTGGCAAACACCAGTTATTACGGAGCTGAACTCC +
Preference number: 3 (lower is better)
Translates to: NILHALHVQQVL*WQTPVITELNS
Trigger: GGAGTTCAGCTCCGTAATAACTGGTGTTTGCCATCACAGGACTTGCTGCACGTGAAGAGCGTGAAGGATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558711.1
3UTR TCA 72 bp TTGTGCCCTTGTACTAAACTCCCGTGTCGTGTGGTATaGCAACACCAGCATGTCTGTGCAGATTCTTCTCCA +
Preference number: 3 (lower is better)
Translates to: LCPCTKLPCRVV*QHQHVCADSSP
Trigger: TGGAGAAGAATCTGCACAGACATGCTGGTGTTGTCATACCACACGACACGGGAGTTTAGTACAAGGGCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR CCA 72 bp CAATTTGAGTTAAAAATGAAGGCTGTGTCAGCAACGTaGTACATTGGTGGACTTGGGAGGGGGCATCCCAGA +
Preference number: 3 (lower is better)
Translates to: QFELKMKAVSAT*YIGGLGRGHPR
Trigger: TCTGGGATGCCCCCTCCCAAGTCCACCAATGTACCACGTTGCTGACACAGCCTTCATTTTTAACTCAAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR CAA 90 bp AAGCACACCCAAGGCTGTGCTTGCTCAGGTATTACATTTTCTCCTGGGAGTTGGAGATGCTGCAGGATTTaGCTGCAACAGGATCAAAAC +
Preference number: 3 (lower is better)
Translates to: KHTQGCACSGITFSPGSWRCCRI*LQQDQN
Trigger: GTTTTGATCCTGTTGCAGCAAAATCCTGCAGCATCT...CCAACTCCCAGGAGAAAATGTAATACCTGAGCAAGCACAGCCTTGGGTGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR CAA 90 bp GGAGGAGGGGCCAAGGGAGCTACTCAGTTGTCTATGATGCAGAGGTGTGAAAAAGCTTTTCTGTTTTGCTaGTCTCGTTCCTTCATTGTG +
Preference number: 3 (lower is better)
Translates to: GGGAKGATQLSMMQRCEKAFLFC*SRSFIV
Trigger: CACAATGAAGGAACGAGACAAGCAAAACAGAAAAGC...TTTTTCACACCTCTGCATCATAGACAACTGAGTAGCTCCCTTGGCCCCTCCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR CAA 90 bp GTGATGCTGACATTAACAAGAGGCAGTCACAGCAGTGTGTCTCACATGGGCTCCAGTCTTCTTTGCATTTaGCTGGCCCAATGTCATCAA +
Preference number: 3 (lower is better)
Translates to: VMLTLTRGSHSSVSHMGSSLLCI*LAQCHQ
Trigger: TTGATGACATTGGGCCAGCAAAATGCAAAGAAGACT...GGAGCCCATGTGAGACACACTGCTGTGACTGCCTCTTGTTAATGTCAGCATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR CAA 90 bp GCCTCTAATAAGGTGTCAACAGCGGACAGGTGTGCAGAAATGACACAAAATGGGACTGATGTCAACTCCTaGCATGGTAACTTGTTCTCC +
Preference number: 3 (lower is better)
Translates to: ASNKVSTADRCAEMTQNGTDVNS*HGNLFS
Trigger: GGAGAACAAGTTACCATGCAAGGAGTTGACATCAGT...CCCATTTTGTGTCATTTCTGCACACCTGTCCGCTGTTGACACCTTATTAGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR CAA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGCGAGGCAGGCAAACCTaGCTTTGTAGAAATAGGTAT +
Preference number: 3 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLRGRQT*LCRNRY
Trigger: ATACCTATTTCTACAAAGCAAGGTTTGCCTGCCTCG...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR TCA 72 bp AAAATGGGCTTCCCAGTCACAGACAAGCTGTGTAACTaGGCCCGGTTATGCCTGGATTCAATTGCTAATGGA +
Preference number: 3 (lower is better)
Translates to: KMGFPVTDKLCN*ARLCLDSIANG
Trigger: TCCATTAGCAATTGAATCCAGGCATAACCGGGCTCAGTTACACAGCTTGTCTGTGACTGGGAAGCCCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR TCA 72 bp TTCACTGGGGTACCTGCTTTCCCAGTACATTGGCACTaGTCAATACAAGATCAAGGGCACTCACATTTGCCT +
Preference number: 3 (lower is better)
Translates to: FTGVPAFPVHWH*SIQDQGHSHLP
Trigger: AGGCAAATGTGAGTGCCCTTGATCTTGTATTGATCAGTGCCAATGTACTGGGAAAGCAGGTACCCCAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR GCA 72 bp CGATCACCTCCTCTCCAGGAAAAGTTCAGATCCTCCTaGTACACTGAACACAAGCTCAACAGCATTTTAGAG +
Preference number: 3 (lower is better)
Translates to: RSPPLQEKFRSS*YTEHKLNSILE
Trigger: CTCTAAAATGCTGTTGAGCTTGTGTTCAGTGTAGCAGGAGGATCTGAACTTTTCCTGGAGAGGAGGTGATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR CCA 72 bp GGAACTAGACAGAGGATACAAATCAAAGGTACTATCTaGGGAACTCCCTCCCTCATGCCTTTCAAAGTAGGG +
Preference number: 3 (lower is better)
Translates to: GTRQRIQIKGTI*GTPSLMPFKVG
Trigger: CCCTACTTTGAAAGGCATGAGGGAGGGAGTTCCCCAGATAGTACCTTTGATTTGTATCCTCTGTCTAGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
3UTR CCA 72 bp TGTCTTTGTGCCCTTGTACTAAACTCCCGTGTCGTGTaGTATGACAACACCAGCATGTCTGTGCAGATTCTT +
Preference number: 3 (lower is better)
Translates to: CLCALVLNSRVV*YDNTSMSVQIL
Trigger: AAGAATCTGCACAGACATGCTGGTGTTGTCATACCACACGACACGGGAGTTTAGTACAAGGGCACAAAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR-3UTR CAA 90 bp ACTCAAGAGCATACTAAAGATTGGGCATTTCCCAAGTATGGTGAGCCAAGCTCCATACTCCACAAAGGCTaGGGAACATTCCACATCAGT +
Preference number: 3 (lower is better)
Translates to: TQEHTKDWAFPKYGEPSSILHKG*GTFHIS
Trigger: ACTGATGTGGAATGTTCCCAAGCCTTTGTGGAGTAT...GGAGCTTGGCTCACCATACTTGGGAAATGCCCAATCTTTAGTATGCTCTTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
3UTR-3UTR CAA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGTCCTTGCATGGTAACTaGTTCTCCAGGATGAAGTTT +
Preference number: 3 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLSLHGN*FSRMKF
Trigger: AAACTTCATCCTGGAGAACAAGTTACCATGCAAGGA...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR CAA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGTTCTTGCTCATCCCATaGCTTGCAAACTCACAAGAT +
Preference number: 3 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLFLLIP*LANSQD
Trigger: ATCTTGTGAGTTTGCAAGCAATGGGATGAGCAAGAA...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR TCA 72 bp ATCAAGGGCACTCACATTTGCCTAATACAGATGCCTTaGATTTCCACGGAAAAGCTGTCCACGATACGACCA +
Preference number: 3 (lower is better)
Translates to: IKGTHICLIQMP*ISTEKLSTIRP
Trigger: TGGTCGTATCGTGGACAGCTTTTCCGTGGAAATTCAAGGCATCTGTATTAGGCAAATGTGAGTGCCCTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR GCA 72 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTaGTTTCCCAGTACATTGGCACTGATCAATACAAGA +
Preference number: 3 (lower is better)
Translates to: VKPSTDQFHWGT*FPSTLALINTR
Trigger: TCTTGTATTGATCAGTGCCAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR CCA 72 bp AACAACCACAGGATTACTCAAGAGCATACTAAAGATTaGGCATTTCCCAAGTATGGTGAGCCAAGCTCCCTG +
Preference number: 3 (lower is better)
Translates to: NNHRITQEHTKD*AFPKYGEPSSL
Trigger: CAGGGAGCTTGGCTCACCATACTTGGGAAATGCCCAATCTTTAGTATGCTCTTGAGTAATCCTGTGGTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
3UTR CCA 72 bp ATGACTTTTGAACAGGCATGGAGTAAACAGGGTCTATaGTCAAGCAGCCCCATGGATCTGAAATTGTTGGAG +
Preference number: 3 (lower is better)
Translates to: MTFEQAWSKQGL*SSSPMDLKLLE
Trigger: CTCCAACAATTTCAGATCCATGGGGCTGCTTGACCATAGACCCTGTTTACTCCATGCCTGTTCAAAAGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR CAA 90 bp ATCAGGAAGAACTATGCCTGGAGCATATGCTTCCATCACCACATCAGTGACTTCTACTTGCCTCTAACATaGAAGAGTCTTCCAACTGGA +
Preference number: 3 (lower is better)
Translates to: IRKNYAWSICFHHHISDFYLPLT*KSLPTG
Trigger: TCCAGTTGGAAGACTCTTCAATGTTAGAGGCAAGTA...GAAGTCACTGATGTGGTGATGGAAGCATATGCTCCAGGCATAGTTCTTCCTGAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
3UTR-3UTR CAA 90 bp ACTCAAGAGCATACTAAAGATTGGGCATTTCCCAAGTATGGTGAGCCAAGCTCCCCTGGGAATTACTACTaGCCTCTAACATTGAAGAGT +
Preference number: 3 (lower is better)
Translates to: TQEHTKDWAFPKYGEPSSPGNYY*PLTLKS
Trigger: ACTCTTCAATGTTAGAGGCAAGTAGTAATTCCCAGG...GGAGCTTGGCTCACCATACTTGGGAAATGCCCAATCTTTAGTATGCTCTTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
3UTR-3UTR CAA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCAGAGTCTTTGATCATATaGTCCATTCATCTCCAGTCC +
Preference number: 3 (lower is better)
Translates to: LFSNPISLATQTGFICVAESLII*SIHLQS
Trigger: GGACTGGAGATGAATGGACAATATGATCAAAGACTC...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR TCA 72 bp TCCTCTCCAGGAAAAGTTCAGATCCTCCTGCTACACTaGACACAAGCTCAACAGCATTTTAGAGGGATCATT +
Preference number: 3 (lower is better)
Translates to: SSPGKVQILLLH*TQAQQHFRGII
Trigger: AATGATCCCTCTAAAATGCTGTTGAGCTTGTGTTCAGTGTAGCAGGAGGATCTGAACTTTTCCTGGAGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR GCA 72 bp GTTCTCAATATCAGGAAGAACTATGCCTGGAGCATATaGTTCCATCACCACATCAGTGACTTCAGTCAAAGG +
Preference number: 3 (lower is better)
Translates to: VLNIRKNYAWSI*FHHHISDFSQR
Trigger: CCTTTGACTGAAGTCACTGATGTGGTGATGGAAGCATATGCTCCAGGCATAGTTCTTCCTGATATTGAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
3UTR GCA 72 bp AACAAACATTTAGTGACACATCTTTCAAGAACGTCCTaGAACCCTGTGGTCACAAAGAGTATGCGTGCAAGG +
Preference number: 3 (lower is better)
Translates to: NKHLVTHLSRTS*NPVVTKSMRAR
Trigger: CCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
3UTR GCA 72 bp CATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTaGAGATTTCTTTATGAGGTCAAAGTAGCAGACATG +
Preference number: 3 (lower is better)
Translates to: HQLGHTDWFHLC*RFLYEVKVADM
Trigger: CATGTCTGCTACTTTGACCTCATAAAGAAATCTGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR CAA 90 bp GAAATCATCTCAAGATTCAACTGCCAGTGTGTTCTCAATCACTGGAGTAATTTGTGCCAGCTCACAAAATaGTATGAGGACCAACCACCG +
Preference number: 3 (lower is better)
Translates to: EIISRFNCQCVLNHWSNLCQLTK*YEDQPP
Trigger: CGGTGGTTGGTCCTCATACAATTTTGTGAGCTGGCA...CAAATTACTCCAGTGATTGAGAACACACTGGCAGTTGAATCTTGAGATGATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR TCA 72 bp TACATCTCACTGCGGCCCTTAGAAAAACCGTACCAATaGCTTATCTTACTGGAGGTGTTAATACCACCAACA +
Preference number: 3 (lower is better)
Translates to: YISLRPLEKPYQ*LILLEVLIPPT
Trigger: TGTTGGTGGTATTAACACCTCCAGTAAGATAAGTCATTGGTACGGTTTTTCTAAGGGCCGCAGTGAGATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR GCA 72 bp AAGATGAGAGCTAAAATATCCTTCACGCTCTTCACGTaGAGCAAGTCCTGTGATGGCAAACACCAGTTATTA +
Preference number: 3 (lower is better)
Translates to: KMRAKISFTLFT*SKSCDGKHQLL
Trigger: TAATAACTGGTGTTTGCCATCACAGGACTTGCTGCACGTGAAGAGCGTGAAGGATATTTTAGCTCTCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558711.1
3UTR CCA 72 bp AGATTCTCAGTTCTCAATATCAGGAAGAACTATGCCTaGAGCATATGCTTCCATCACCACATCAGTGACTTC +
Preference number: 3 (lower is better)
Translates to: RFSVLNIRKNYA*SICFHHHISDF
Trigger: GAAGTCACTGATGTGGTGATGGAAGCATATGCTCCAGGCATAGTTCTTCCTGATATTGAGAACTGAGAATCT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
3UTR-3UTR CAA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCACAAAGTGGGCTGTATTaGTCTAACTCTCAAATTAAG +
Preference number: 3 (lower is better)
Translates to: LFSNPISLATQTGFICVAQSGLY*SNSQIK
Trigger: CTTAATTTGAGAGTTAGACAAATACAGCCCACTTTG...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR TCA 72 bp TTCCAAATATTATGCAGAACACAATCTCAGTGGCGCTaGGCTACCTTCTTTATGCCTTGTGGTCCAATGTAT +
Preference number: 3 (lower is better)
Translates to: FQILCRTQSQWR*ATFFMPCGPMY
Trigger: ATACATTGGACCACAAGGCATAAAGAAGGTAGCTCAGCGCCACTGAGATTGTGTTCTGCATAATATTTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR GCA 72 bp AATGAGAAGTTAAGAAATTACAAACCCAACAGAAGGTaGATCGCTGGCCTCTGTGACATCCTTATGCTACAT +
Preference number: 3 (lower is better)
Translates to: NEKLRNYKPNRR*IAGLCDILMLH
Trigger: ATGTAGCATAAGGATGTCACAGAGGCCAGCGATGCACCTTCTGTTGGGTTTGTAATTTCTTAACTTCTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
3UTR GCA 72 bp TGGCAAACACCAGTTATTACGGAGCTGAACTCCAAATaGACCCATGTTCATTCAGTAACAAATATCGACTGT +
Preference number: 3 (lower is better)
Translates to: WQTPVITELNSK*THVHSVTNIDC
Trigger: ACAGTCGATATTTGTTACTGAATGAACATGGGTGCATTTGGAGTTCAGCTCCGTAATAACTGGTGTTTGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558711.1
3UTR-3UTR CAA 90 bp GAAATCATCTCAAGATTCAACTGCCAGTGTGTTCTCAATCACTGGAGTAATTTGCTGAACCACCCAACTTaGATCTGTTCATGTCTATCA +
Preference number: 3 (lower is better)
Translates to: EIISRFNCQCVLNHWSNLLNHPT*ICSCLS
Trigger: TGATAGACATGAACAGATCAAAGTTGGGTGGTTCAG...CAAATTACTCCAGTGATTGAGAACACACTGGCAGTTGAATCTTGAGATGATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR TCA 72 bp AGATGTAATATAAAGTCTGGAGTTCACATGAGCTCTTaGCTGAAGGACACGATCCTATCAGAGAAAGGTAAG +
Preference number: 3 (lower is better)
Translates to: RCNIKSGVHMSS*LKDTILSEKGK
Trigger: CTTACCTTTCTCTGATAGGATCGTGTCCTTCAGTCAAGAGCTCATGTGAACTCCAGACTTTATATTACATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR GCA 72 bp GAACGAGTAACTGATACGGTATCTGTACATTCACTCTaGACAAGGTTCCTTTATCTCAAAAGCATTACTCGA +
Preference number: 3 (lower is better)
Translates to: ERVTDTVSVHSL*TRFLYLKSITR
Trigger: TCGAGTAATGCTTTTGAGATAAAGGAACCTTGTGCAGAGTGAATGTACAGATACCGTATCAGTTACTCGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR CCA 72 bp ACAGGAAATAAATGTCCACAGACCATAAACTTAATCTaGTTAATAGCTAACCTGGGAGAAAGGTGGGAGTTG +
Preference number: 3 (lower is better)
Translates to: TGNKCPQTINLI*LIANLGERWEL
Trigger: CAACTCCCACCTTTCTCCCAGGTTAGCTATTAACCAGATTAAGTTTATGGTCTGTGGACATTTATTTCCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
3UTR GCA 72 bp TGTTCTTGGACCTCTTCAAGAATAGTTTTGGTGAGTTaGAACATTATTGGAGAGAAAGATGCTGCAGGATTT +
Preference number: 3 (lower is better)
Translates to: CSWTSSRIVLVS*NIIGEKDAAGF
Trigger: AAATCCTGCAGCATCTTTCTCTCCAATAATGTTGCAACTCACCAAAACTATTCTTGAAGAGGTCCAAGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR CAA 90 bp TGTTTTCAATGGAAATGGAAGCCTTCCAAATATTATGCAGAACACAATCTCAGTGAGTCTTTGATCATATaGTCCATTCATCTCCAGTCC +
Preference number: 3 (lower is better)
Translates to: CFQWKWKPSKYYAEHNLSESLII*SIHLQS
Trigger: GGACTGGAGATGAATGGACAATATGATCAAAGACTC...ACTGAGATTGTGTTCTGCATAATATTTGGAAGGCTTCCATTTCCATTGAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR-3UTR CAA 90 bp TGGGTTAAACAGAAGTTTAGCCCTATGCTACTTCTATGCTTCAATTACCTAGAACCATCCTCTAATGCTTaGGTGTCATTTTACAGTTCA +
Preference number: 3 (lower is better)
Translates to: WVKQKFSPMLLLCFNYLEPSSNA*VSFYSS
Trigger: TGAACTGTAAAATGACACCAAAGCATTAGAGGATGG...TTCTAGGTAATTGAAGCATAGAAGTAGCATAGGGCTAAACTTCTGTTTAACCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR GCA 72 bp TGCAACATTATTGGAGAGAAAGATGCTGCAGGATTTTaGTGCAACAGGATCAAAACTAAGACCAATAATCAA +
Preference number: 3 (lower is better)
Translates to: CNIIGEKDAAGF*CNRIKTKTNNQ
Trigger: TTGATTATTGGTCTTAGTTTTGATCCTGTTGCAGCAAAATCCTGCAGCATCTTTCTCTCCAATAATGTTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR GCA 72 bp GAAAATTTCTCTGTTGCAAACATCATAGAGAAAATGTaGAATCCCAGGCCAATAAGCAAATCTTTGCCCAAA +
Preference number: 3 (lower is better)
Translates to: ENFSVANIIEKM*NPRPISKSLPK
Trigger: TTTGGGCAAAGATTTGCTTATTGGCCTGGGATTGCACATTTTCTCTATGATGTTTGCAACAGAGAAATTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp ATGTCACTATGGACCGGCGGCACCTCCCTGCTGAGGGCTGCGGGTCCTGCCCAGGCGGCACCTCCCTGCTaGGGGCTGCGGGTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: MSLWTGGTSLLRAAGPAQAAPPC*GLRVLP
Trigger: GGGCAGGACCCGCAGCCCTCAGCAGGGAGGTGCCGC...CTGGGCAGGACCCGCAGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp CAGCCTGGCATGTCACTATGGACCGGCGGCACCTCCCTGCTGAGGGCTGCGGGTCCACCTGGTCCTGGCTaGGGCGACGCTCTGTCTGAA +
Preference number: 4 (lower is better)
Translates to: QPGMSLWTGGTSLLRAAGPPGPG*GDALSE
Trigger: TTCAGACAGAGCGTCGCCCCAGCCAGGACCAGGTGG...ACCCGCAGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACATGCCAGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR GCA 90 bp TCTGCCCAGGGCCTGCTGGGCGCCCATGGTGGTACCATAACTGTGCAGGGGATCTCTCTGCCCAGGGCCTaGTGGGCGCCCATGGTGGTA +
Preference number: 4 (lower is better)
Translates to: SAQGLLGAHGGTITVQGISLPRA*WAPMVV
Trigger: TACCACCATGGGCGCCCAGCAGGCCCTGGGCAGAGA...GATCCCCTGCACAGTTATGGTACCACCATGGGCGCCCAGCAGGCCCTGGGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR GCA 90 bp CAGCCTGGCATGTCACTATGGACCGGCGGCACCTCCCTGCTGAGGGCTGCGGGTAGAAGCAGCCGAGGCTaGGCACCTTACTACACACGG +
Preference number: 4 (lower is better)
Translates to: QPGMSLWTGGTSLLRAAGRSSRG*APYYTR
Trigger: CCGTGTGTAGTAAGGTGCGCAGCCTCGGCTGCTTCT...ACCCGCAGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACATGCCAGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR TCA 90 bp AGTTCCCAGCCTGGCATGTCACTATGGACCGGCGGCACCTCCCTGCTGAGGGCTGGTGGCCAGACAGCTTaGAGTCTGCCAGGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: SSQPGMSLWTGGTSLLRAGGQTA*SLPGVL
Trigger: CAGGACTCCTGGCAGACTTCAAGCTGTCTGGCCACC...AGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACATGCCAGGCTGGGAACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR TCA 90 bp CAGCCTGGCATGTCACTATGGACCGGCGGCACCTCCCTGCTGAGGGCTGCGGGTTGGCTCCCAGTCTGCTaGCTTCTCTTTGGGTTTGGC +
Preference number: 4 (lower is better)
Translates to: QPGMSLWTGGTSLLRAAGWLPVC*LLFGFG
Trigger: GCCAAACCCAAAGAGAAGTCAGCAGACTGGGAGCCA...ACCCGCAGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACATGCCAGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR GCA 90 bp GGTCCTGCCCAGCAGCTGCCTCCACACCACTCAGCCTCCCTCTTAAGTTCTAGTGAGGGCTGCGGGTCCTaGCCAGCAGCTGCCTCCACA +
Preference number: 4 (lower is better)
Translates to: GPAQQLPPHHSASLLSSSEGCGS*PAAAST
Trigger: TGTGGAGGCAGCTGCTGGGCAGGACCCGCAGCCCTC...ACTAGAACTTAAGAGGGAGGCTGAGTGGTGTGGAGGCAGCTGCTGGGCAGGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp ATGTCACTATGGACCGGCGGCACCTCCCTGCTGAGGGCTGCGGGTCCTGCCCAGACCACTAGGGGACTTTaGGCCATTGGTGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: MSLWTGGTSLLRAAGPAQTTRGL*AIGAAS
Trigger: GGAAGCAGCACCAATGGCCCAAAGTCCCCTAGTGGT...CTGGGCAGGACCCGCAGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp ATGTCACTATGGACCGGCGGCACCTCCCTGCTGAGGGCTGCGGGTCCTGCCCAGACTGCAGGTAGGTCTTaGGACCCTTCTTCTCCCACC +
Preference number: 4 (lower is better)
Translates to: MSLWTGGTSLLRAAGPAQTAGRS*DPSSPT
Trigger: GGTGGGAGAAGAAGGGTCCCAAGACCTACCTGCAGT...CTGGGCAGGACCCGCAGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp CAGCCTGGCATGTCACTATGGACCGGCGGCACCTCCCTGCTGAGGGCTGCGGGTCCAGGAGAGTGGGAGTaGCCTTCGGATCAGTTGCTT +
Preference number: 4 (lower is better)
Translates to: QPGMSLWTGGTSLLRAAGPGEWE*PSDQLL
Trigger: AAGCAACTGATCCGAAGGCCACTCCCACTCTCCTGG...ACCCGCAGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACATGCCAGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp AGTTCCCAGCCTGGCATGTCACTATGGACCGGCGGCACCTCCCTGCTGAGGGCTGGGACTTTGGGCCATTaGTGCTGCTTCCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SSQPGMSLWTGGTSLLRAGTLGH*CCFPPL
Trigger: CAGAGGAGGGAAGCAGCACCAATGGCCCAAAGTCCC...AGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACATGCCAGGCTGGGAACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp CGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCACCTTGCCCTGCCGCCTaGAGCCATGAGCCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: RPATLWSQRVCVQGPPPPPCPAA*SHEPQP
Trigger: AGGCTGGGGCTCATGGCTCCAGGCGGCAGGGCAAGG...TGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp CAGCCTGGCATGTCACTATGGACCGGCGGCACCTCCCTGCTGAGGGCTGCGGGTCTGGAATCATCCTGCTaGGATGTGGGATTCACGTCT +
Preference number: 4 (lower is better)
Translates to: QPGMSLWTGGTSLLRAAGLESSC*DVGFTS
Trigger: AGACGTGAATCCCACATCTCAGCAGGATGATTCCAG...ACCCGCAGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACATGCCAGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR TCA 90 bp ATGTCACTATGGACCGGCGGCACCTCCCTGCTGAGGGCTGCGGGTCCTGCCCAGCAGGCTGCGTCAATTTaGGCAAAGCTAAGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: MSLWTGGTSLLRAAGPAQQAASI*AKLSPH
Trigger: ATGGGGACTTAGCTTTGCTCAAATTGACGCAGCCTG...CTGGGCAGGACCCGCAGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR TCA 90 bp TCTGCCCAGGGCCTGCTGGGCGCCCATGGTGGTACCATAACTGTGCAGGGGATCGTCTCATCTTGCGCTTaGGAGCTTCCAGCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: SAQGLLGAHGGTITVQGIVSSCA*ELPAQR
Trigger: CCTCTGAGCTGGAAGCTCTCAAGCGCAAGATGAGAC...GATCCCCTGCACAGTTATGGTACCACCATGGGCGCCCAGCAGGCCCTGGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR TCA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCTGCCGCCTGGAGCCATaGGCCCCAGCCTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: VVTKSMRARSSTSSAIISCRLEP*APASAP
Trigger: GGGAGCTGAGGCTGGGGCTCATGGCTCCAGGCGGCA...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp CAGCCTGGCATGTCACTATGGACCGGCGGCACCTCCCTGCTGAGGGCTGCGGGTGACCAGAGAGTGGGATaGGAAGAGATCAGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: QPGMSLWTGGTSLLRAAGDQRVG*EEIRLC
Trigger: ACACAACCTGATCTCTTCTCATCCCACTCTCTGGTC...ACCCGCAGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACATGCCAGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR GCA 90 bp CTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCTCGGCGGCCTCCGAATaGCATCCCCTCCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LQPCGHKEYACKVLHLQCSAASE*HPLLPL
Trigger: CAGAGGCAGGAGGGGATGGCATTCGGAGGCCGCCGA...GCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp CGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCATGCAAGTCCTGGGGGTaGTGGAGCAGGAGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: RPATLWSQRVCVQGPPPPCKSWG*WSRRRP
Trigger: GGGCCTCCTCCTGCTCCACCACCCCCAGGACTTGCA...TGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp CGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGCTGGGGCTCAGCTGTaGTCTTCCCTGGCCCCAAGC +
Preference number: 4 (lower is better)
Translates to: RPATLWSQRVCVQGPPPPAGAQL*SSLAPS
Trigger: GCTTGGGGCCAGGGAAGACCACAGCTGAGCCCCAGC...TGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp GGTCCTGCCCAGCAGCTGCCTCCACACCACTCAGCCTCCCTCTTAAGTTCTAGTCCTGGCATGTCACTATaGACCGGCGGCACCTCCCTG +
Preference number: 4 (lower is better)
Translates to: GPAQQLPPHHSASLLSSSPGMSL*TGGTSL
Trigger: CAGGGAGGTGCCGCCGGTCCATAGTGACATGCCAGG...ACTAGAACTTAAGAGGGAGGCTGAGTGGTGTGGAGGCAGCTGCTGGGCAGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR TCA 90 bp AGTTCCCAGCCTGGCATGTCACTATGGACCGGCGGCACCTCCCTGCTGAGGGCTTTACTCAGGATCGACTaGGCCACTTCAAGTCCGGCT +
Preference number: 4 (lower is better)
Translates to: SSQPGMSLWTGGTSLLRALLRID*ATSSPA
Trigger: AGCCGGACTTGAAGTGGCTCAGTCGATCCTGAGTAA...AGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACATGCCAGGCTGGGAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR TCA 90 bp AGTTCCCAGCCTGGCATGTCACTATGGACCGGCGGCACCTCCCTGCTGAGGGCTAGTGGAAGCAGCTCTTaGGCAAGGAGAGATGTCCCT +
Preference number: 4 (lower is better)
Translates to: SSQPGMSLWTGGTSLLRASGSSS*ARRDVP
Trigger: AGGGACATCTCTCCTTGCTCAAGAGCTGCTTCCACT...AGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACATGCCAGGCTGGGAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR TCA 90 bp CCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATCAAAGATCCAAGTCCTaGGGGGAGGGGCGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: PCGHKEYACKVLHLQCHHQRSKS*GEGRRG
Trigger: CCCCCTCCGCCCCTCCCCTCAGGACTTGGATCTTTG...ATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp GGAGGAGGGGCCAAGGGAGCTACTCAGTTGTCTATGATGCAGAGGTGTGAAAAATGCCGCCTGGAGCCATaGGCCCCAGCCTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: GGGAKGATQLSMMQRCEKCRLEP*APASAP
Trigger: GGGAGCTGAGGCTGGGGCTCATGGCTCCAGGCGGCA...TTTTTCACACCTCTGCATCATAGACAACTGAGTAGCTCCCTTGGCCCCTCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR TCA 90 bp AAAGGTAGCTGGAAGCAGGAAACTTCTCCCTGTATGGGCTTCCCAGCTGCAGGGGGCTGGCGACTGCGATaGCCTATCCCCTTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: KGSWKQETSPCMGFPAAGGWRLR*PIPLPL
Trigger: GAGCGGCAAGGGGATAGGTCATCGCAGTCGCCAGCC...CCCTGCAGCTGGGAAGCCCATACAGGGAGAAGTTTCCTGCTTCCAGCTACCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR TCA 90 bp CCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATGGCTGGCGACTGCGATaGCCTATCCCCTTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: PCGHKEYACKVLHLQCHHGWRLR*PIPLPL
Trigger: GAGCGGCAAGGGGATAGGTCATCGCAGTCGCCAGCC...ATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp AGTTCCCAGCCTGGCATGTCACTATGGACCGGCGGCACCTCCCTGCTGAGGGCTCAACCACCGGCTTCCTaGGGGATTTGCAATCTACCT +
Preference number: 4 (lower is better)
Translates to: SSQPGMSLWTGGTSLLRAQPPAS*GICNLP
Trigger: AGGTAGATTGCAAATCCCTCAGGAAGCCGGTGGTTG...AGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACATGCCAGGCTGGGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR GCA 90 bp CCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATAGGGGGAGGGATGGATaGGGGAGGCGGAGGCAATGC +
Preference number: 4 (lower is better)
Translates to: PCGHKEYACKVLHLQCHHRGRDG*GRRRQC
Trigger: GCATTGCCTCCGCCTCCCGCATCCATCCCTCCCCCT...ATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp GCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCACACCTTGCCAAGAGCTaGCGGTGCTGGTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: ATLWSQRVCVQGPPPPVPHLAKS*RCWWGW
Trigger: CCATCCCCACCAGCACCGGCAGCTCTTGGCAAGGTG...TGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp CTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCAACCGAGGTTGGCCTaGTCTGAGGAAGGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: LQPCGHKEYACKVLHLQCQPRLA*SEEGRA
Trigger: AGCCCGGCCTTCCTCAGAGCAGGCCAACCTCGGTTG...GCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp ATGTCACTATGGACCGGCGGCACCTCCCTGCTGAGGGCTGCGGGTCCTGCCCAGTGCTCAGTCAGGCTGTaGTCAGGACTTTTGGAATCA +
Preference number: 4 (lower is better)
Translates to: MSLWTGGTSLLRAAGPAQCSVRL*SGLLES
Trigger: TGATTCCAAAAGTCCTGACCACAGCCTGACTGAGCA...CTGGGCAGGACCCGCAGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp GGCAGGATGTGCTTAAGCTGCCAAATGGCATCCCGATCACCTCCTCTCCAGGAATGCAAGTCCTGGGGGTaGTGGAGCAGGAGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: GRMCLSCQMASRSPPLQECKSWG*WSRRRP
Trigger: GGGCCTCCTCCTGCTCCACCACCCCCAGGACTTGCA...TTCCTGGAGAGGAGGTGATCGGGATGCCATTTGGCAGCTTAAGCACATCCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp CCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATCGCCCGGCCCGGGCCTaGTGCTTTTTACCTAACGTG +
Preference number: 4 (lower is better)
Translates to: PCGHKEYACKVLHLQCHHRPARA*CFLPNV
Trigger: CACGTTAGGTAAAAAGCATCAGGCCCGGGCCGGGCG...ATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp TCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCGCCCATCAGAGGAGCTaGTTCTCGGCCTCCACGCCC +
Preference number: 4 (lower is better)
Translates to: SRTSCNPVVTKSMRARSSAHQRS*FSASTP
Trigger: GGGCGTGGAGGCCGAGAATCAGCTCCTCTGATGGGC...GGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp CTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCGACAAACCTGTTTGCTaGTGCTCCAGCCCGCTCGGC +
Preference number: 4 (lower is better)
Translates to: LQPCGHKEYACKVLHLQCDKPVC*CSSPLG
Trigger: GCCGAGCGGGCTGGAGCATCAGCAAACAGGTTTGTC...GCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp TCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCGGCTGGCGACTGCGATaGCCTATCCCCTTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: SRTSCNPVVTKSMRARSSGWRLR*PIPLPL
Trigger: GAGCGGCAAGGGGATAGGTCATCGCAGTCGCCAGCC...GGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp AGTTCCCAGCCTGGCATGTCACTATGGACCGGCGGCACCTCCCTGCTGAGGGCTTCTCTTGGTCAGCATTaGAGCCCATCTCTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: SSQPGMSLWTGGTSLLRASLGQH*SPSLLS
Trigger: GGAGAGAAGAGATGGGCTGCAATGCTGACCAAGAGA...AGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACATGCCAGGCTGGGAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR GCA 90 bp CAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATAACAGCCGTGGCGGCTaGAGCCTCGAAGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: QPCGHKEYACKVLHLQCHNSRGG*SLEGCC
Trigger: GCAGCATCCTTCGAGGCTGCAGCCGCCACGGCTGTT...ATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR GCA 90 bp AAAGGTAGCTGGAAGCAGGAAACTTCTCCCTGTATGGGCTTCCCAGCTGCAGGGACGGGGAGCTCTCCCTaGCAGTCACCAGCACTCTGG +
Preference number: 4 (lower is better)
Translates to: KGSWKQETSPCMGFPAAGTGSSP*QSPALW
Trigger: CCAGAGTGCTGGTGACTGGCAGGGAGAGCTCCCCGT...CCCTGCAGCTGGGAAGCCCATACAGGGAGAAGTTTCCTGCTTCCAGCTACCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR GCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACTCGGCGGCCTCCGAATaGCATCCCCTCCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHSAASE*HPLLPL
Trigger: CAGAGGCAGGAGGGGATGGCATTCGGAGGCCGCCGA...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp ATGTCACTATGGACCGGCGGCACCTCCCTGCTGAGGGCTGCGGGTCCTGCCCAGAGAAGCTTGTCTTTGTaGCCTTGTACTAAACTCCCG +
Preference number: 4 (lower is better)
Translates to: MSLWTGGTSLLRAAGPAQRSLSL*PCTKLP
Trigger: CGGGAGTTTAGTACAAGGGCACAAAGACAAGCTTCT...CTGGGCAGGACCCGCAGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp GACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCGCGGAGGGGGAGGGATaGATGCGGGAGGCGGAGGCA +
Preference number: 4 (lower is better)
Translates to: DTSFKNVLQPCGHKEYACAEGEG*MREAEA
Trigger: TGCCTCCGCCTCCCGCATCCATCCCTCCCCCTCCGC...GCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACTGGGGGTGCAAGTCCTaGGGGTGGTGGAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHWGCKS*GWWSRR
Trigger: CCTCCTGCTCCACCACCCCCAGGACTTGCACCCCCA...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp GTGATGCTGACATTAACAAGAGGCAGTCACAGCAGTGTGTCTCACATGGGCTCCCAAAGATCCAAGTCCTaGGGGGAGGGGCGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: VMLTLTRGSHSSVSHMGSQRSKS*GEGRRG
Trigger: CCCCCTCCGCCCCTCCCCTCAGGACTTGGATCTTTG...GGAGCCCATGTGAGACACACTGCTGTGACTGCCTCTTGTTAATGTCAGCATCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp TTCCCAAGTATGGTGAGCCAAGCTCCCTGTGATTCTTCTGGCACTAAAAGGGTTTGCCGCCTGGAGCCATaGGCCCCAGCCTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: FPSMVSQAPCDSSGTKRVCRLEP*APASAP
Trigger: GGGAGCTGAGGCTGGGGCTCATGGCTCCAGGCGGCA...AACCCTTTTAGTGCCAGAAGAATCACAGGGAGCTTGGCTCACCATACTTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR TCA 90 bp ATGTCACTATGGACCGGCGGCACCTCCCTGCTGAGGGCTGCGGGTCCTGCCCAGATTGCTCTGCTCAGATaGAACAATCATTTTCCACCC +
Preference number: 4 (lower is better)
Translates to: MSLWTGGTSLLRAAGPAQIALLR*NNHFPP
Trigger: GGGTGGAAAATGATTGTTTCATCTGAGCAGAGCAAT...CTGGGCAGGACCCGCAGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR TCA 90 bp AGTTCCCAGCCTGGCATGTCACTATGGACCGGCGGCACCTCCCTGCTGAGGGCTCATTTGAGTGCCACCTaGTTCCTGATTAGTACGACC +
Preference number: 4 (lower is better)
Translates to: SSQPGMSLWTGGTSLLRAHLSAT*FLISTT
Trigger: GGTCGTACTAATCAGGAATCAGGTGGCACTCAAATG...AGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACATGCCAGGCTGGGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR GCA 90 bp TCTGCCCAGGGCCTGCTGGGCGCCCATGGTGGTACCATAACTGTGCAGGGGATCGGCCTTCGGATCAGTTaGTTTCTTCTCACTCTTCAC +
Preference number: 4 (lower is better)
Translates to: SAQGLLGAHGGTITVQGIGLRIS*FLLTLH
Trigger: GTGAAGAGTGAGAAGAAAGCAACTGATCCGAAGGCC...GATCCCCTGCACAGTTATGGTACCACCATGGGCGCCCAGCAGGCCCTGGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR GCA 90 bp GCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCAAATGCCATCCCCTCCTaGCTCTGTGGAGCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: ATLWSQRVCVQGPPPPVPNAIPS*LCGAAV
Trigger: GACTGCAGCTCCACAGAGGCAGGAGGGGATGGCATT...TGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp GCTGGCAACTCTCTGAGCCCTCTTCTGGGTTTAGGTGGGAAGAGAAATGAAGTGTCGGCGGCCTCCGAATaGCATCCCCTCCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: AGNSLSPLLGLGGKRNEVSAASE*HPLLPL
Trigger: CAGAGGCAGGAGGGGATGGCATTCGGAGGCCGCCGA...CACTTCATTTCTCTTCCCACCTAAACCCAGAAGAGGGCTCAGAGAGTTGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR GCA 90 bp AAAGGTAGCTGGAAGCAGGAAACTTCTCCCTGTATGGGCTTCCCAGCTGCAGGGCCTCTCACCAGGCAATaGAGGGAGCCGGAGGATCCT +
Preference number: 4 (lower is better)
Translates to: KGSWKQETSPCMGFPAAGPLTRQ*REPEDP
Trigger: AGGATCCTCCGGCTCCCTGCATTGCCTGGTGAGAGG...CCCTGCAGCTGGGAAGCCCATACAGGGAGAAGTTTCCTGCTTCCAGCTACCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp CGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCACCCTCCTCTGGCTCCTaGCCACCATCATCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: RPATLWSQRVCVQGPPPPPSSGS*PPSSES
Trigger: TGACTCTGATGATGGTGGCCAGGAGCCAGAGGAGGG...TGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CCA 90 bp GCCCAGCAGCTGCCTCCACACCACTCAGCCTCCCTCTTAAGTTCTAGTTTTCGAACCACCCTGGGTTTGTaGTACTCCAGGGCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: AQQLPPHHSASLLSSSFRTTLGL*YSRAAL
Trigger: CAGAGCGGCCCTGGAGTACCACAAACCCAGGGTGGT...TCGAAAACTAGAACTTAAGAGGGAGGCTGAGTGGTGTGGAGGCAGCTGCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp CGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCACTCCAGGGCTGTCTCTaGCGACTTTGGCTTGACCTC +
Preference number: 4 (lower is better)
Translates to: RPATLWSQRVCVQGPPPPLQGCL*RLWLDL
Trigger: GAGGTCAAGCCAAAGTCGCCAGAGACAGCCCTGGAG...TGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CCA 90 bp CAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCCCAGCACTCACAGGTaGCATTGGAGGTGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: QPCGHKEYACKVLHLQCHPSTHR*HWRCGR
Trigger: TCTCCCGCACCTCCAATGCCACCTGTGAGTGCTGGG...ATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTGGAAACTGCCTCCTaGGGATGGGGGTCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHLETAS*GWGSSS
Trigger: GCTGGACGACCCCCATCCCCAGGAGGCAGTTTCCAG...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp GGCAGGATGTGCTTAAGCTGCCAAATGGCATCCCGATCACCTCCTCTCCAGGAAGATGCTGCTGAGGGCTaGGGAGCCTTGGAGACAGAG +
Preference number: 4 (lower is better)
Translates to: GRMCLSCQMASRSPPLQEDAAEG*GALETE
Trigger: CTCTGTCTCCAAGGCTCCCCAGCCCTCAGCAGCATC...TTCCTGGAGAGGAGGTGATCGGGATGCCATTTGGCAGCTTAAGCACATCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR TCA 90 bp TGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCCCTGTCCAAACGGCTaGGGAACGGAGCACAGGGTG +
Preference number: 4 (lower is better)
Translates to: CGHKEYACKVLHLQCHHFPCPNG*GTEHRV
Trigger: CACCCTGTGCTCCGTTCCTCAGCCGTTTGGACAGGG...GAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp GGAGGAGGGGCCAAGGGAGCTACTCAGTTGTCTATGATGCAGAGGTGTGAAAAAGGGTGCTCCTCTTATTaGGAGGGCCCACGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: GGGAKGATQLSMMQRCEKGCSSY*EGPRGA
Trigger: AGCTCCCCGTGGGCCCTCTCAATAAGAGGAGCACCC...TTTTTCACACCTCTGCATCATAGACAACTGAGTAGCTCCCTTGGCCCCTCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR TCA 90 bp CATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGGCCCATCAGAGGAGCTaGTTCTCGGCCTCCACGCCC +
Preference number: 4 (lower is better)
Translates to: HLSRTSCNPVVTKSMRARAHQRS*FSASTP
Trigger: GGGCGTGGAGGCCGAGAATCAGCTCCTCTGATGGGC...CCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp GCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATGGGAGGACAGGTCCTaGACTTTGGCCACCACTTTG +
Preference number: 4 (lower is better)
Translates to: ATLWSQRVCVQGPPPPVPWEDRS*TLATTL
Trigger: CAAAGTGGTGGCCAAAGTTCAGGACCTGTCCTCCCA...TGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp CGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAAGGCGAGGGAACAGGTaGCGTCTGTTTGTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: RPATLWSQRVCVQGPPPPRRGNR*RLFVCA
Trigger: AGCACACACAAACAGACGTCACCTGTTCCCTCGCCT...TGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp CTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCGTCTGCAGCCCTGCCTaGACTAAGGACTTCTGCACA +
Preference number: 4 (lower is better)
Translates to: LQPCGHKEYACKVLHLQCVCSPA*TKDFCT
Trigger: TGTGCAGAAGTCCTTAGTGCAGGCAGGGCTGCAGAC...GCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR GCA 90 bp CTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCGGAGTCCTGTCATCCTaGTCAGTCAGGCTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: LQPCGHKEYACKVLHLQCGVLSS*SVRLWS
Trigger: TGACCACAGCCTGACTGAGCAGGATGACAGGACTCC...GCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp CATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGAGGGGGAGGGATGGATaGGGGAGGCGGAGGCAATGC +
Preference number: 4 (lower is better)
Translates to: HLSRTSCNPVVTKSMRARRGRDG*GRRRQC
Trigger: GCATTGCCTCCGCCTCCCGCATCCATCCCTCCCCCT...CCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCTGTCTGGAAACTaGCTCCTGGGGATGGGGGTC +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHLLSGN*LLGMGV
Trigger: GACCCCCATCCCCAGGAGGCAGTTTCCAGACAGGAG...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCCTCTCACCAGGCAATaGAGGGAGCCGGAGGATCCT +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHPLTRQ*REPEDP
Trigger: AGGATCCTCCGGCTCCCTGCATTGCCTGGTGAGAGG...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp ATGTCACTATGGACCGGCGGCACCTCCCTGCTGAGGGCTGCGGGTCCTGCCCAGTCTGTACATTCACTCTaGACAAGGTTCCTTTATCTC +
Preference number: 4 (lower is better)
Translates to: MSLWTGGTSLLRAAGPAQSVHSL*TRFLYL
Trigger: GAGATAAAGGAACCTTGTGCAGAGTGAATGTACAGA...CTGGGCAGGACCCGCAGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp TCTGCCCAGGGCCTGCTGGGCGCCCATGGTGGTACCATAACTGTGCAGGGGATCCCAACACTCGAATTCTaGTTTGTTACTGCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: SAQGLLGAHGGTITVQGIPTLEF*FVTAGR
Trigger: CCTACCTGCAGTAACAAACCAGAATTCGAGTGTTGG...GATCCCCTGCACAGTTATGGTACCACCATGGGCGCCCAGCAGGCCCTGGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp CTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCTTGACCTCACCACCCTaGGTTTGTGGTACTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LQPCGHKEYACKVLHLQCLTSPP*VCGTPG
Trigger: CCCTGGAGTACCACAAACCCAGGGTGGTGAGGTCAA...GCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CCA 90 bp GACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCTGCAAGTCCTGGGGGTaGTGGAGCAGGAGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: DTSFKNVLQPCGHKEYACCKSWG*WSRRRP
Trigger: GGGCCTCCTCCTGCTCCACCACCCCCAGGACTTGCA...GCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp GACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCTGGGGGTGCAAGTCCTaGGGGTGGTGGAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: DTSFKNVLQPCGHKEYACWGCKS*GWWSRR
Trigger: CCTCCTGCTCCACCACCCCCAGGACTTGCACCCCCA...GCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp CGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAAAGGTGCTCTGCCGCTaGGTCTCTTGTCCAAGCACA +
Preference number: 4 (lower is better)
Translates to: RPATLWSQRVCVQGPPPPKVLCR*VSCPST
Trigger: TGTGCTTGGACAAGAGACCCAGCGGCAGAGCACCTT...TGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp GCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCAAACGTGGTACATTGGTaGACTTGGGAGGGGGCATCC +
Preference number: 4 (lower is better)
Translates to: ATLWSQRVCVQGPPPPVPNVVHW*TWEGAS
Trigger: GGATGCCCCCTCCCAAGTCCACCAATGTACCACGTT...TGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp GGCAGGATGTGCTTAAGCTGCCAAATGGCATCCCGATCACCTCCTCTCCAGGAACAATACTCGGGAGGCTaGTCCCGAGTCCCAGCTACT +
Preference number: 4 (lower is better)
Translates to: GRMCLSCQMASRSPPLQEQYSGG*SRVPAT
Trigger: AGTAGCTGGGACTCGGGACCAGCCTCCCGAGTATTG...TTCCTGGAGAGGAGGTGATCGGGATGCCATTTGGCAGCTTAAGCACATCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR CCA 90 bp CCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATGGGCTGCTGGGCGAATaGCAATCGTCTCCTTACCCT +
Preference number: 4 (lower is better)
Translates to: PCGHKEYACKVLHLQCHHGLLGE*QSSPYP
Trigger: AGGGTAAGGAGACGATTGCCATTCGCCCAGCAGCCC...ATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp GGAAGAACTATGCCTGGAGCATATGCTTCCATCACCACATCAGTGACTTCAGTCCCTTGCCCTGCCGCCTaGAGCCATGAGCCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: GRTMPGAYASITTSVTSVPCPAA*SHEPQP
Trigger: AGGCTGGGGCTCATGGCTCCAGGCGGCAGGGCAAGG...GACTGAAGTCACTGATGTGGTGATGGAAGCATATGCTCCAGGCATAGTTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACGATGCTGCTGAGGGCTaGGGAGCCTTGGAGACAGAG +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHDAAEG*GALETE
Trigger: CTCTGTCTCCAAGGCTCCCCAGCCCTCAGCAGCATC...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp CGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCATATTCTGGAGGTGACTaGTGCTGGGGCTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: RPATLWSQRVCVQGPPPPYSGGD*CWGSAV
Trigger: CACAGCTGAGCCCCAGCACCAGTCACCTCCAGAATA...TGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561249.5
CDS-3UTR TCA 90 bp GCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATGCTCGCCCCGGATATaGAATGCCCGAAGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: ATLWSQRVCVQGPPPPVPCSPRI*NARSSN
Trigger: GTTTGAACTTCGGGCATTTCATATCCGGGGCGAGCA...TGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp GCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCAGGACGCACACATTTCTaGAGGTCTTTGGAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: ATLWSQRVCVQGPPPPVPGRTHF*RSLEGS
Trigger: ACTGCCCTCCAAAGACCTTCAGAAATGTGTGCGTCC...TGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp CGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCACACTTTCACAGGGCTTaGGGAAGGTCTCTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: RPATLWSQRVCVQGPPPPHFHRA*GRSLCL
Trigger: CAGACAGAGAGACCTTCCTCAAGCCCTGTGAAAGTG...TGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp CGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAACACGTAGCTGGGTGTaGTCTCCTTCTCACCAGACT +
Preference number: 4 (lower is better)
Translates to: RPATLWSQRVCVQGPPPPTRSWV*SPSHQT
Trigger: AGTCTGGTGAGAAGGAGATCACACCCAGCTACGTGT...TGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp GCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCACATGAGCAGGTGCTGTaGGTTGCATTTGCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: ATLWSQRVCVQGPPPPVPHEQVL*VAFALL
Trigger: CAGGAGAGCAAATGCAACTCACAGCACCTGCTCATG...TGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp CAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATTTCAGCACTGGTTCCTaGAGGGTTACGTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: QPCGHKEYACKVLHLQCHFSTGS*RVTWPQ
Trigger: CTGTGGCCACGTAACCCTTCAGGAACCAGTGCTGAA...ATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp TCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCAGCTACTCGGGAGGCTaGGGCAGGAGGATTGCTTAC +
Preference number: 4 (lower is better)
Translates to: SRTSCNPVVTKSMRARSSSYSGG*GRRIAY
Trigger: GTAAGCAATCCTCCTGCCTCAGCCTCCCGAGTAGCT...GGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR TCA 90 bp CTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCCCTGGTTCCCCATCGTaGTCCCCAGGATGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: LSRTSCNPVVTKSMRARSPGSPS*SPGCGL
Trigger: CAGACCACATCCTGGGGATCACGATGGGGAACCAGG...GGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp GGAGGAGGGGCCAAGGGAGCTACTCAGTTGTCTATGATGCAGAGGTGTGAAAAACCTGGTTCCCCATCGTaGTCCCCAGGATGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: GGGAKGATQLSMMQRCEKPGSPS*SPGCGL
Trigger: CAGACCACATCCTGGGGATCACGATGGGGAACCAGG...TTTTTCACACCTCTGCATCATAGACAACTGAGTAGCTCCCTTGGCCCCTCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR TCA 90 bp GGGCATTTCCCAAGTATGGTGAGCCAAGCTCCCTGTGATTCTTCTGGCACTAAAGGGTGCTCCTCTTATTaGGAGGGCCCACGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: GHFPSMVSQAPCDSSGTKGCSSY*EGPRGA
Trigger: AGCTCCCCGTGGGCCCTCTCAATAAGAGGAGCACCC...TTTAGTGCCAGAAGAATCACAGGGAGCTTGGCTCACCATACTTGGGAAATGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR TCA 90 bp CATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGGGGTGCTCCTCTTATTaGGAGGGCCCACGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: HLSRTSCNPVVTKSMRARGCSSY*EGPRGA
Trigger: AGCTCCCCGTGGGCCCTCTCAATAAGAGGAGCACCC...CCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp GGAAGAACTATGCCTGGAGCATATGCTTCCATCACCACATCAGTGACTTCAGTCGCCCATCAGAGGAGCTaGTTCTCGGCCTCCACGCCC +
Preference number: 4 (lower is better)
Translates to: GRTMPGAYASITTSVTSVAHQRS*FSASTP
Trigger: GGGCGTGGAGGCCGAGAATCAGCTCCTCTGATGGGC...GACTGAAGTCACTGATGTGGTGATGGAAGCATATGCTCCAGGCATAGTTCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR TCA 90 bp GCTGGCAACTCTCTGAGCCCTCTTCTGGGTTTAGGTGGGAAGAGAAATGAAGTGGACAAACCTGTTTGCTaGTGCTCCAGCCCGCTCGGC +
Preference number: 4 (lower is better)
Translates to: AGNSLSPLLGLGGKRNEVDKPVC*CSSPLG
Trigger: GCCGAGCGGGCTGGAGCATCAGCAAACAGGTTTGTC...CACTTCATTTCTCTTCCCACCTAAACCCAGAAGAGGGCTCAGAGAGTTGCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR TCA 90 bp CAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATTGGGAGGACAGGTCCTaGACTTTGGCCACCACTTTG +
Preference number: 4 (lower is better)
Translates to: QPCGHKEYACKVLHLQCHWEDRS*TLATTL
Trigger: CAAAGTGGTGGCCAAAGTTCAGGACCTGTCCTCCCA...ATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp TCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCTTGGTATTCTGGAGGTaGCTGGTGCTGGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: SRTSCNPVVTKSMRARSSLVFWR*LVLGLS
Trigger: GCTGAGCCCCAGCACCAGTCACCTCCAGAATACCAA...GGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561249.5
CDS-3UTR GCA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCTTGGGCCATTGGTGCTaGTTCCCTCCTCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: VVTKSMRARSSTSSAIISLGHWC*FPPLAP
Trigger: AGGAGCCAGAGGAGGGAAGCAGCACCAATGGCCCAA...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR GCA 90 bp CCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATACTTTGGGCCATTGGTaGTGCTTCCCTCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: PCGHKEYACKVLHLQCHHTLGHW*CFPPLA
Trigger: AGCCAGAGGAGGGAAGCAGCACCAATGGCCCAAAGT...ATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR GCA 90 bp GCCCAGCAGCTGCCTCCACACCACTCAGCCTCCCTCTTAAGTTCTAGTTTTCGAGTCTGCAGCCCTGCCTaGACTAAGGACTTCTGCACA +
Preference number: 4 (lower is better)
Translates to: AQQLPPHHSASLLSSSFRVCSPA*TKDFCT
Trigger: TGTGCAGAAGTCCTTAGTGCAGGCAGGGCTGCAGAC...TCGAAAACTAGAACTTAAGAGGGAGGCTGAGTGGTGTGGAGGCAGCTGCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR GCA 90 bp CGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCATCACTCTTCACTGTCTaGAGCCCTGCCTGCACTAAG +
Preference number: 4 (lower is better)
Translates to: RPATLWSQRVCVQGPPPPSLFTV*SPACTK
Trigger: CTTAGTGCAGGCAGGGCTGCAGACAGTGAAGAGTGA...TGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR GCA 90 bp CTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCCTTTGGGGACTCCTTaGACACCACCACCATCTGTT +
Preference number: 4 (lower is better)
Translates to: LQPCGHKEYACKVLHLQCPLGTP*TPPPSV
Trigger: AACAGATGGTGGTGGTGTGCAAGGAGTCCCCAAAGG...GCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp CTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCGGGGTGCAGAATCTCTaGTGGCCCAGAAAAACCACA +
Preference number: 4 (lower is better)
Translates to: LQPCGHKEYACKVLHLQCGVQNL*WPRKTT
Trigger: TGTGGTTTTTCTGGGCCAGCAGAGATTCTGCACCCC...GCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp TCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCCTCACGGACAGCTCTTaGAGCTTCCCCTCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: SRTSCNPVVTKSMRARSSLTDSS*SFPSWF
Trigger: GAACCAGGAGGGGAAGCTGCAAGAGCTGTCCGTGAG...GGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp TCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCAATGCCATCCCCTCCTaGCTCTGTGGAGCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: SRTSCNPVVTKSMRARSSNAIPS*LCGAAV
Trigger: GACTGCAGCTCCACAGAGGCAGGAGGGGATGGCATT...GGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp AAGCACACCCAAGGCTGTGCTTGCTCAGGTATTACATTTTCTCCTGGGAGTTGGGATGACCTATCCCCTTaGCGCTCCTTGCCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: KHTQGCACSGITFSPGSWDDLSP*RSLPCR
Trigger: GCGGCAGGGCAAGGAGCGGCAAGGGGATAGGTCATC...CCAACTCCCAGGAGAAAATGTAATACCTGAGCAAGCACAGCCTTGGGTGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR GCA 90 bp GGGCATTTCCCAAGTATGGTGAGCCAAGCTCCCTGTGATTCTTCTGGCACTAAATCCCCGGCTGGCGACTaGGATGACCTATCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: GHFPSMVSQAPCDSSGTKSPAGD*DDLSPC
Trigger: GCAAGGGGATAGGTCATCGCAGTCGCCAGCCGGGGA...TTTAGTGCCAGAAGAATCACAGGGAGCTTGGCTCACCATACTTGGGAAATGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR GCA 90 bp CATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCCCGGCTGGCGACTaGGATGACCTATCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: HLSRTSCNPVVTKSMRARSPAGD*DDLSPC
Trigger: GCAAGGGGATAGGTCATCGCAGTCGCCAGCCGGGGA...CCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp GACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCCAACCGAGGTTGGCCTaGTCTGAGGAAGGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: DTSFKNVLQPCGHKEYACQPRLA*SEEGRA
Trigger: AGCCCGGCCTTCCTCAGAGCAGGCCAACCTCGGTTG...GCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp CCCAACAGAAGGTGCATCGCTGGCCTCTGTGACATCCTTATGCTACATCCTGCACCCCTCTTTCTGGACTaGTGGCAACTCTCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: PNRRCIAGLCDILMLHPAPLFLD*WQLSEP
Trigger: GGGCTCAGAGAGTTGCCAGCAGTCCAGAAAGAGGGG...TGCAGGATGTAGCATAAGGATGTCACAGAGGCCAGCGATGCACCTTCTGTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp CAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATACCACTAGGGGACTTTaGGCCATTGGTGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: QPCGHKEYACKVLHLQCHTTRGL*AIGAAS
Trigger: GGAAGCAGCACCAATGGCCCAAAGTCCCCTAGTGGT...ATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CCA 90 bp GTGATGCTGACATTAACAAGAGGCAGTCACAGCAGTGTGTCTCACATGGGCTCCGCTGCTCCAGGAGAGTaGGAGTGGCCTTCGGATCAG +
Preference number: 4 (lower is better)
Translates to: VMLTLTRGSHSSVSHMGSAAPGE*EWPSDQ
Trigger: CTGATCCGAAGGCCACTCCCACTCTCCTGGAGCAGC...GGAGCCCATGTGAGACACACTGCTGTGACTGCCTCTTGTTAATGTCAGCATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CCA 90 bp CCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATAGAGGGGCCATCCGCTaGCTTAGAATTGGACCGTTC +
Preference number: 4 (lower is better)
Translates to: PCGHKEYACKVLHLQCHHRGAIR*LRIGPF
Trigger: GAACGGTCCAATTCTAAGCCAGCGGATGGCCCCTCT...ATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CCA 90 bp ACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGGCGGAGGGGGAGGGATaGATGCGGGAGGCGGAGGCA +
Preference number: 4 (lower is better)
Translates to: TFSDTSFKNVLQPCGHKEAEGEG*MREAEA
Trigger: TGCCTCCGCCTCCCGCATCCATCCCTCCCCCTCCGC...CTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp TTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGGCGGAGGGGGAGGGATaGATGCGGGAGGCGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LVTHLSRTSCNPVVTKSMAEGEG*MREAEA
Trigger: TGCCTCCGCCTCCCGCATCCATCCCTCCCCCTCCGC...CATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp GGCAGGATGTGCTTAAGCTGCCAAATGGCATCCCGATCACCTCCTCTCCAGGAAGTTACGTGGCCACAGTaGCAGCCCTGCTTACCTTCA +
Preference number: 4 (lower is better)
Translates to: GRMCLSCQMASRSPPLQEVTWPQ*QPCLPS
Trigger: TGAAGGTAAGCAGGGCTGCCACTGTGGCCACGTAAC...TTCCTGGAGAGGAGGTGATCGGGATGCCATTTGGCAGCTTAAGCACATCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp CCCAACAGAAGGTGCATCGCTGGCCTCTGTGACATCCTTATGCTACATCCTGCACAATACTCGGGAGGCTaGTCCCGAGTCCCAGCTACT +
Preference number: 4 (lower is better)
Translates to: PNRRCIAGLCDILMLHPAQYSGG*SRVPAT
Trigger: AGTAGCTGGGACTCGGGACCAGCCTCCCGAGTATTG...TGCAGGATGTAGCATAAGGATGTCACAGAGGCCAGCGATGCACCTTCTGTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp CTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCGGAGATGCCGGTTTGTaGTCAGGCTTCCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: LSRTSCNPVVTKSMRARSGDAGL*SGFPGS
Trigger: GGAGCCTGGGAAGCCTGACCACAAACCGGCATCTCC...GGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp GGCAGGATGTGCTTAAGCTGCCAAATGGCATCCCGATCACCTCCTCTCCAGGAACAGTCACCAGCACTCTaGAAACAGTCATCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: GRMCLSCQMASRSPPLQEQSPAL*KQSSSG
Trigger: CCCCGAGGATGACTGTTTCCAGAGTGCTGGTGACTG...TTCCTGGAGAGGAGGTGATCGGGATGCCATTTGGCAGCTTAAGCACATCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR CCA 90 bp CGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGCCAAGGTCTGTGTCTaGCGTCTTGGGAATATCTGG +
Preference number: 4 (lower is better)
Translates to: RPATLWSQRVCVQGPPPPAKVCV*RLGNIW
Trigger: CCAGATATTCCCAAGACGCCAGACACAGACCTTGGC...TGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp TGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCTCAGCGTGGGCTGCTaGGCGAATGGCAATCGTCTC +
Preference number: 4 (lower is better)
Translates to: CGHKEYACKVLHLQCHHFLSVGC*ANGNRL
Trigger: GAGACGATTGCCATTCGCCCAGCAGCCCACGCTGAG...GAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp TCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCGGTACAAACTCAGCGTaGGCTGCTGGGCGAATGGCA +
Preference number: 4 (lower is better)
Translates to: SRTSCNPVVTKSMRARSSGTNSA*AAGRMA
Trigger: TGCCATTCGCCCAGCAGCCCACGCTGAGTTTGTACC...GGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp GACACTGCTTTGCAGGCTAGCACAACTAGAGTTCCTCAAGGTTTGGGGGAAGACGATGCTGCTGAGGGCTaGGGAGCCTTGGAGACAGAG +
Preference number: 4 (lower is better)
Translates to: DTALQASTTRVPQGLGEDDAAEG*GALETE
Trigger: CTCTGTCTCCAAGGCTCCCCAGCCCTCAGCAGCATC...GTCTTCCCCCAAACCTTGAGGAACTCTAGTTGTGCTAGCCTGCAAAGCAGTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp CGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCACTTTGCAGAGGATGGTaGCTCCAAGGTGTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: RPATLWSQRVCVQGPPPPLCRGW*LQGVSR
Trigger: TCTGCTGACACCTTGGAGCCACCATCCTCTGCAAAG...TGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp CCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATGACCTTTGCAGAGGATaGTGGCTCCAAGGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: PCGHKEYACKVLHLQCHHDLCRG*WLQGVS
Trigger: GCTGACACCTTGGAGCCACCATCCTCTGCAAAGGTC...ATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp TTCCCAAGTATGGTGAGCCAAGCTCCCTGTGATTCTTCTGGCACTAAAAGGGTTGCTGGGGCTCAGCTGTaGTCTTCCCTGGCCCCAAGC +
Preference number: 4 (lower is better)
Translates to: FPSMVSQAPCDSSGTKRVAGAQL*SSLAPS
Trigger: GCTTGGGGCCAGGGAAGACCACAGCTGAGCCCCAGC...AACCCTTTTAGTGCCAGAAGAATCACAGGGAGCTTGGCTCACCATACTTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320930.7
3UTR CAA 72 bp TCAGCCAAGGTCATGAGCAGGTGCTGTGAGTTGCATTaGCTCTCCTGTCTGGAAACTGCCTCCTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: SAKVMSRCCELH*LSCLETASWGW
Trigger: CCATCCCCAGGAGGCAGTTTCCAGACAGGAGAGCAAATGCAACTCACAGCACCTGCTCATGACCTTGGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp TCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCATTTCCGAGGTCAGGTaGAACCCGAGACCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SRTSCNPVVTKSMRARSSISEVR*NPRPCF
Trigger: GAAGCAGGGTCTCGGGTTTCACCTGACCTCGGAAAT...GGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR TCA 90 bp CAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATTCTCTGACTTCCCTCTaGTTCTGTCTCCACGCTTGC +
Preference number: 4 (lower is better)
Translates to: QPCGHKEYACKVLHLQCHSLTSL*FCLHAC
Trigger: GCAAGCGTGGAGACAGAATCAGAGGGAAGTCAGAGA...ATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR TCA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGGGGCGACGCTCTGTCTaGAGACCACCGTTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLGRRSV*RPPLPA
Trigger: AGCTGGCAACGGTGGTCTTCAGACAGAGCGTCGCCC...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR TCA 90 bp GGCAGGATGTGCTTAAGCTGCCAAATGGCATCCCGATCACCTCCTCTCCAGGAAACACGTAGCTGGGTGTaGTCTCCTTCTCACCAGACT +
Preference number: 4 (lower is better)
Translates to: GRMCLSCQMASRSPPLQETRSWV*SPSHQT
Trigger: AGTCTGGTGAGAAGGAGATCACACCCAGCTACGTGT...TTCCTGGAGAGGAGGTGATCGGGATGCCATTTGGCAGCTTAAGCACATCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp CCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATAAAACAGGAGGTGCCTaGAGGAGGCTGAGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: PCGHKEYACKVLHLQCHHKTGGA*RRLRRG
Trigger: ACCTCTTCTCAGCCTCCTTCAGGCACCTCCTGTTTT...ATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp GCTGGCAACTCTCTGAGCCCTCTTCTGGGTTTAGGTGGGAAGAGAAATGAAGTGGTTTCTGGGCGAGTGTaGGGGACACTCGTGTGGACA +
Preference number: 4 (lower is better)
Translates to: AGNSLSPLLGLGGKRNEVVSGRV*GTLVWT
Trigger: TGTCCACACGAGTGTCCCTCACACTCGCCCAGAAAC...CACTTCATTTCTCTTCCCACCTAAACCCAGAAGAGGGCTCAGAGAGTTGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR TCA 90 bp AGTTCCCAGCCTGGCATGTCACTATGGACCGGCGGCACCTCCCTGCTGAGGGCTAGAAAGAAAATGCTATaGAGTAACCAATGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: SSQPGMSLWTGGTSLLRARKKML*SNQCPA
Trigger: TGCAGGGCATTGGTTACTTCATAGCATTTTCTTTCT...AGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACATGCCAGGCTGGGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR GCA 90 bp CTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCTGCCAGCTTCCAGTTTaGTGCTCATCTCAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: LQPCGHKEYACKVLHLQCCQLPV*CSSQVE
Trigger: TTCCACCTGAGATGAGCAGCAAACTGGAAGCTGGCA...GCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR GCA 90 bp GCCCAGCAGCTGCCTCCACACCACTCAGCCTCCCTCTTAAGTTCTAGTTTTCGATCACTCTTCACTGTCTaGAGCCCTGCCTGCACTAAG +
Preference number: 4 (lower is better)
Translates to: AQQLPPHHSASLLSSSFRSLFTV*SPACTK
Trigger: CTTAGTGCAGGCAGGGCTGCAGACAGTGAAGAGTGA...TCGAAAACTAGAACTTAAGAGGGAGGCTGAGTGGTGTGGAGGCAGCTGCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR GCA 90 bp GGCAGGATGTGCTTAAGCTGCCAAATGGCATCCCGATCACCTCCTCTCCAGGAAAGGTGGCATTGGAGGTaGGGGAGACAAAGATCCAAG +
Preference number: 4 (lower is better)
Translates to: GRMCLSCQMASRSPPLQERWHWR*GRQRSK
Trigger: CTTGGATCTTTGTCTCCCGCACCTCCAATGCCACCT...TTCCTGGAGAGGAGGTGATCGGGATGCCATTTGGCAGCTTAAGCACATCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp CAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATAGGTGGCATTGGAGGTaGGGGAGACAAAGATCCAAG +
Preference number: 4 (lower is better)
Translates to: QPCGHKEYACKVLHLQCHRWHWR*GRQRSK
Trigger: CTTGGATCTTTGTCTCCCGCACCTCCAATGCCACCT...ATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp CCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATCCTTTGGGGACTCCTTaGACACCACCACCATCTGTT +
Preference number: 4 (lower is better)
Translates to: PCGHKEYACKVLHLQCHHPLGTP*TPPPSV
Trigger: AACAGATGGTGGTGGTGTGCAAGGAGTCCCCAAAGG...ATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp GCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCAGTCCTCCACCTCCAGTaGCATCATTTCCATGTGTCT +
Preference number: 4 (lower is better)
Translates to: ATLWSQRVCVQGPPPPVPVLHLQ*HHFHVS
Trigger: AGACACATGGAAATGATGGCACTGGAGGTGGAGGAC...TGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp CAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCACAAAGAGTATGCGTaGAAGGTCCTCCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: QPCGHKEYACKVLHLQCHHKEYA*KVLHLQ
Trigger: CTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTG...ATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp CTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCAGGCATGCAGGCCAGTaGTTATTTTCCAGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: LQPCGHKEYACKVLHLQCRHAGQ*LFSRPK
Trigger: CTTTGGCCTGGAAAATAAGCACTGGCCTGCATGCCT...GCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp GGAAGAACTATGCCTGGAGCATATGCTTCCATCACCACATCAGTGACTTCAGTCAACAGCCGTGGCGGCTaGAGCCTCGAAGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: GRTMPGAYASITTSVTSVNSRGG*SLEGCC
Trigger: GCAGCATCCTTCGAGGCTGCAGCCGCCACGGCTGTT...GACTGAAGTCACTGATGTGGTGATGGAAGCATATGCTCCAGGCATAGTTCTTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR GCA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGACGGGGAGCTCTCCCTaGCAGTCACCAGCACTCTGG +
Preference number: 4 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLTGSSP*QSPALW
Trigger: CCAGAGTGCTGGTGACTGGCAGGGAGAGCTCCCCGT...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR GCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACAAACTCAGCGTGGGCTaGTGGGCGAATGGCAATCGT +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHKLSVG*WANGNR
Trigger: ACGATTGCCATTCGCCCAGCAGCCCACGCTGAGTTT...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp AGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTCCCCGGCTGGCGACTaGGATGACCTATCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: SDTSFKNVLQPCGHKEYASPAGD*DDLSPC
Trigger: GCAAGGGGATAGGTCATCGCAGTCGCCAGCCGGGGA...CGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp TTCCCAAGTATGGTGAGCCAAGCTCCCTGTGATTCTTCTGGCACTAAAAGGGTTCACCTTGCCAAGAGCTaGCGGTGCTGGTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: FPSMVSQAPCDSSGTKRVHLAKS*RCWWGW
Trigger: CCATCCCCACCAGCACCGGCAGCTCTTGGCAAGGTG...AACCCTTTTAGTGCCAGAAGAATCACAGGGAGCTTGGCTCACCATACTTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR GCA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGCACCTTGCCAAGAGCTaGCGGTGCTGGTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLHLAKS*RCWWGW
Trigger: CCATCCCCACCAGCACCGGCAGCTCTTGGCAAGGTG...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR GCA 90 bp GCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCAACGTCTGTTTGTGTGTaGTGGACTGCGAGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: ATLWSQRVCVQGPPPPVPTSVCV*WTARLN
Trigger: ATTCAGCCTCGCAGTCCAGCACACACAAACAGACGT...TGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCGGTCTCCGTGACCTTTaGAGAGGATGGTGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: VVTKSMRARSSTSSAIISGLRDL*RGWWLQ
Trigger: TTGGAGCCACCATCCTCTGCAAAGGTCACGGAGACC...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp TCTACGTGCTTCTCCAGGTCTGTGCCCTTTCTGGGCCCCGGTGACAGGCCTGAATGTGTTACCTTCTCCTaGGCTCTCAGTTTATCCACT +
Preference number: 4 (lower is better)
Translates to: STCFSRSVPFLGPGDRPECVTFS*ALSLST
Trigger: AGTGGATAAACTGAGAGCGCAGGAGAAGGTAACACA...TTCAGGCCTGTCACCGGGGCCCAGAAAGGGCACAGACCTGGAGAAGCACGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR GCA 90 bp GCCCAGCAGCTGCCTCCACACCACTCAGCCTCCCTCTTAAGTTCTAGTTTTCGAAATCTGTGGAGTCTATaGCCAGAAGCAGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: AQQLPPHHSASLLSSSFRNLWSL*PEAAEA
Trigger: AGCCTCGGCTGCTTCTGGGCATAGACTCCACAGATT...TCGAAAACTAGAACTTAAGAGGGAGGCTGAGTGGTGTGGAGGCAGCTGCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR GCA 90 bp ATGTCACTATGGACCGGCGGCACCTCCCTGCTGAGGGCTGCGGGTCCTGCCCAGCATTTTCCACCCTTATaGTGTTCATTCTTACACAAT +
Preference number: 4 (lower is better)
Translates to: MSLWTGGTSLLRAAGPAQHFPPL*CSFLHN
Trigger: ATTGTGTAAGAATGAACAGCATAAGGGTGGAAAATG...CTGGGCAGGACCCGCAGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp GGCAGGATGTGCTTAAGCTGCCAAATGGCATCCCGATCACCTCCTCTCCAGGAATGTGGTCAGGACTTTTaGAATCAGAGGGGCCATCCG +
Preference number: 4 (lower is better)
Translates to: GRMCLSCQMASRSPPLQECGQDF*NQRGHP
Trigger: CGGATGGCCCCTCTGATTCCAAAAGTCCTGACCACA...TTCCTGGAGAGGAGGTGATCGGGATGCCATTTGGCAGCTTAAGCACATCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CCA 90 bp GGCAGGATGTGCTTAAGCTGCCAAATGGCATCCCGATCACCTCCTCTCCAGGAAATGCCCTCCATTGGCTaGAGTGCTGCATGGATGTCT +
Preference number: 4 (lower is better)
Translates to: GRMCLSCQMASRSPPLQEMPSIG*SAAWMS
Trigger: AGACATCCATGCAGCACTCCAGCCAATGGAGGGCAT...TTCCTGGAGAGGAGGTGATCGGGATGCCATTTGGCAGCTTAAGCACATCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp CATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGCCCAGCACTCACAGGTaGCATTGGAGGTGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: HLSRTSCNPVVTKSMRARPSTHR*HWRCGR
Trigger: TCTCCCGCACCTCCAATGCCACCTGTGAGTGCTGGG...CCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp CTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCACTGGGCTCGATGGCTaGTTTTCGAGGACATTGACT +
Preference number: 4 (lower is better)
Translates to: LQPCGHKEYACKVLHLQCTGLDG*FSRTLT
Trigger: AGTCAATGTCCTCGAAAACCAGCCATCGAGCCCAGT...GCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp CAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCTGGAGATACTCCTTTaGGGACTCCTTGCACACCAC +
Preference number: 4 (lower is better)
Translates to: QPCGHKEYACKVLHLQCHLEILL*GLLAHH
Trigger: GTGGTGTGCAAGGAGTCCCCAAAGGAGTATCTCCAG...ATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp CAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCGTCCTGCAACCCTGTaGTCACAAAGAGTATGCGTG +
Preference number: 4 (lower is better)
Translates to: QPCGHKEYACKVLHLQCHRPATL*SQRVCV
Trigger: CACGCATACTCTTTGTGACCACAGGGTTGCAGGACG...ATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp CTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCTTTTCTCCTGGGAGTTaGGGTGCAGAATCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: LQPCGHKEYACKVLHLQCFSPGS*GAESLL
Trigger: CAGCAGAGATTCTGCACCCCAACTCCCAGGAGAAAA...GCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACAAGGTGCTCTGCCGCTaGGTCTCTTGTCCAAGCACA +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHKVLCR*VSCPST
Trigger: TGTGCTTGGACAAGAGACCCAGCGGCAGAGCACCTT...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp GACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCGGGGCAGGCCACATGTaGAGGCTGGATCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: DTSFKNVLQPCGHKEYACGAGHM*RLDQEG
Trigger: TCCTTCCTGATCCAGCCTCCACATGTGGCCTGCCCC...GCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp GGCAGGATGTGCTTAAGCTGCCAAATGGCATCCCGATCACCTCCTCTCCAGGAAGTACATTGGTGGACTTaGGAGGGGGCATCCCAGATA +
Preference number: 4 (lower is better)
Translates to: GRMCLSCQMASRSPPLQEVHWWT*EGASQI
Trigger: TATCTGGGATGCCCCCTCCCAAGTCCACCAATGTAC...TTCCTGGAGAGGAGGTGATCGGGATGCCATTTGGCAGCTTAAGCACATCCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp CTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCTTACAGCCTGGTTCCTaGAAAAAGAGCCTGCAAGCG +
Preference number: 4 (lower is better)
Translates to: LQPCGHKEYACKVLHLQCLQPGS*KKSLQA
Trigger: CGCTTGCAGGCTCTTTTTCCAGGAACCAGGCTGTAA...GCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp CGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCACTGAGCTCAGGAGATTaGTTAGCAGTCTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: RPATLWSQRVCVQGPPPPLSSGD*LAVSPS
Trigger: AGAGGGAGAGACTGCTAACCAATCTCCTGAGCTCAG...TGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCCGTCTTGGGAATATCTaGGGGGCAGCTCTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: VVTKSMRARSSTSSAIISRLGNI*GAALSP
Trigger: AGGAGAGAGAGCTGCCCCCCAGATATTCCCAAGACG...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp AAAGGTAGCTGGAAGCAGGAAACTTCTCCCTGTATGGGCTTCCCAGCTGCAGGGGCCAAGGTCTGTGTCTaGCGTCTTGGGAATATCTGG +
Preference number: 4 (lower is better)
Translates to: KGSWKQETSPCMGFPAAGAKVCV*RLGNIW
Trigger: CCAGATATTCCCAAGACGCCAGACACAGACCTTGGC...CCCTGCAGCTGGGAAGCCCATACAGGGAGAAGTTTCCTGCTTCCAGCTACCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp GGGCATTTCCCAAGTATGGTGAGCCAAGCTCCCTGTGATTCTTCTGGCACTAAACTCAGCGTGGGCTGCTaGGCGAATGGCAATCGTCTC +
Preference number: 4 (lower is better)
Translates to: GHFPSMVSQAPCDSSGTKLSVGC*ANGNRL
Trigger: GAGACGATTGCCATTCGCCCAGCAGCCCACGCTGAG...TTTAGTGCCAGAAGAATCACAGGGAGCTTGGCTCACCATACTTGGGAAATGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp GCTGGCAACTCTCTGAGCCCTCTTCTGGGTTTAGGTGGGAAGAGAAATGAAGTGGGTACAAACTCAGCGTaGGCTGCTGGGCGAATGGCA +
Preference number: 4 (lower is better)
Translates to: AGNSLSPLLGLGGKRNEVGTNSA*AAGRMA
Trigger: TGCCATTCGCCCAGCAGCCCACGCTGAGTTTGTACC...CACTTCATTTCTCTTCCCACCTAAACCCAGAAGAGGGCTCAGAGAGTTGCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp GGAGGAGGGGCCAAGGGAGCTACTCAGTTGTCTATGATGCAGAGGTGTGAAAAAGGTACAAACTCAGCGTaGGCTGCTGGGCGAATGGCA +
Preference number: 4 (lower is better)
Translates to: GGGAKGATQLSMMQRCEKGTNSA*AAGRMA
Trigger: TGCCATTCGCCCAGCAGCCCACGCTGAGTTTGTACC...TTTTTCACACCTCTGCATCATAGACAACTGAGTAGCTCCCTTGGCCCCTCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR CCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACAGCTGCCGGTGCTGGTaGGGATGGCTTCTTCTTATC +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHSCRCW*GWLLLI
Trigger: GATAAGAAGAAGCCATCCCCACCAGCACCGGCAGCT...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp AGACAGAGGATACAAATCAAAGGTACTATCTGGGGAACTCCCTCCCTCATGCCTGGCACCAACCGAGGTTaGCCTGCTCTGAGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: RQRIQIKGTIWGTPSLMPGTNRG*PALRKA
Trigger: GGCCTTCCTCAGAGCAGGCCAACCTCGGTTGGTGCC...AGGCATGAGGGAGGGAGTTCCCCAGATAGTACCTTTGATTTGTATCCTCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp GGTCCTGCCCAGCAGCTGCCTCCACACCACTCAGCCTCCCTCTTAAGTTCTAGTCACAGCAAACACACTTaGTCTCTTTCGGGTCACAGT +
Preference number: 4 (lower is better)
Translates to: GPAQQLPPHHSASLLSSSHSKHT*SLSGHS
Trigger: ACTGTGACCCGAAAGAGACCAAGTGTGTTTGCTGTG...ACTAGAACTTAAGAGGGAGGCTGAGTGGTGTGGAGGCAGCTGCTGGGCAGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR CAA 72 bp GCTGGGTCTCTTGTCCAAGCACACCCAAGGCTGTGCTaGCTCAGGTATTACATTTTCTCCTGGGAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: AGSLVQAHPRLC*LRYYIFSWELG
Trigger: CCCCAACTCCCAGGAGAAAATGTAATACCTGAGCAAGCACAGCCTTGGGTGTGCTTGGACAAGAGACCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR CAA 72 bp GTCCAAAATGTAAAAGGTGCTCTGCCGCTGGGTCTCTaGTCCAAGCACACCCAAGGCTGTGCTTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: VQNVKGALPLGL*SKHTQGCACSG
Trigger: ACCTGAGCAAGCACAGCCTTGGGTGTGCTTGGACAAGAGACCCAGCGGCAGAGCACCTTTTACATTTTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCACTTTCACAGGGCTTaGGGAAGGTCTCTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHHFHRA*GRSLCL
Trigger: CAGACAGAGAGACCTTCCTCAAGCCCTGTGAAAGTG...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACGGTGGTTTCCTTATGTaGCTCAAGAGCCAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHGGFLM*LKSQGQ
Trigger: CTGACCCTGGCTCTTGAGTCACATAAGGAAACCACC...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp GCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCAAATGATCTGCATCAATaGCACTGGCCAAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: ATLWSQRVCVQGPPPPVPNDLHQ*HWPREK
Trigger: CTTCTCCCTTGGCCAGTGTCATTGATGCAGATCATT...TGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp AAAGGTAGCTGGAAGCAGGAAACTTCTCCCTGTATGGGCTTCCCAGCTGCAGGGAGTCATCTCCAGCAATaGGACTGCCTAGATCAGCCT +
Preference number: 4 (lower is better)
Translates to: KGSWKQETSPCMGFPAAGSHLQQ*DCLDQP
Trigger: AGGCTGATCTAGGCAGTCTCATTGCTGGAGATGACT...CCCTGCAGCTGGGAAGCCCATACAGGGAGAAGTTTCCTGCTTCCAGCTACCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR TCA 90 bp AGACAGAGGATACAAATCAAAGGTACTATCTGGGGAACTCCCTCCCTCATGCCTCCTGGTTCCCCATCGTaGTCCCCAGGATGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: RQRIQIKGTIWGTPSLMPPGSPS*SPGCGL
Trigger: CAGACCACATCCTGGGGATCACGATGGGGAACCAGG...AGGCATGAGGGAGGGAGTTCCCCAGATAGTACCTTTGATTTGTATCCTCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR TCA 90 bp CTAGCACCAAGCTCCAAGGACACTGCTTTGCAGGCTAGCACAACTAGAGTTCCTCAAGCCCAGTGTCCTTaGAAGCCGTCTCAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: LAPSSKDTALQASTTRVPQAQCP*KPSQSS
Trigger: GGAGCTTTGAGACGGCTTTCAAGGACACTGGGCTTG...AGGAACTCTAGTTGTGCTAGCCTGCAAAGCAGTGTCCTTGGAGCTTGGTGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR TCA 90 bp CATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGGTTTCTGGGCGAGTGTaGGGGACACTCGTGTGGACA +
Preference number: 4 (lower is better)
Translates to: HLSRTSCNPVVTKSMRARVSGRV*GTLVWT
Trigger: TGTCCACACGAGTGTCCCTCACACTCGCCCAGAAAC...CCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp CCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATGCTGGACTGCGAGGCTaGATTATTAAACACCTTGCC +
Preference number: 4 (lower is better)
Translates to: PCGHKEYACKVLHLQCHHAGLRG*IIKHLA
Trigger: GGCAAGGTGTTTAATAATTCAGCCTCGCAGTCCAGC...ATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp CTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCCTCCTTTGGTCTCCGTaGCCTTTGCAGAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: LSRTSCNPVVTKSMRARSLLWSP*PLQRMV
Trigger: CACCATCCTCTGCAAAGGTCACGGAGACCAAAGGAG...GGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp TGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCTCCTTTGGTCTCCGTaGCCTTTGCAGAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: CGHKEYACKVLHLQCHHFLLWSP*PLQRMV
Trigger: CACCATCCTCTGCAAAGGTCACGGAGACCAAAGGAG...GAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp CAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCAGCTTCCAGTTTGCTaGTCATCTCAGGTGGAATCC +
Preference number: 4 (lower is better)
Translates to: QPCGHKEYACKVLHLQCHQLPVC*SSQVES
Trigger: GGATTCCACCTGAGATGAGCAGCAAACTGGAAGCTG...ATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR GCA 90 bp CATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGAGCAGCAGAGAGAGCTaGTCCAGGAGAGTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: HLSRTSCNPVVTKSMRARSSRES*SRRVGV
Trigger: CACTCCCACTCTCCTGGAGCAGCTCTCTCTGCTGCT...CCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR GCA 90 bp TGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCGGGCGACTCAGGGTCTaGTCCCTTCGGTTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: CGHKEYACKVLHLQCHHFGRLRV*SLRFSF
Trigger: AAAACTGAACCGAAGGGAGCAGACCCTGAGTCGCCC...GAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR GCA 90 bp TGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCGGAGTCCTGTCATCCTaGTCAGTCAGGCTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: CGHKEYACKVLHLQCHHFGVLSS*SVRLWS
Trigger: TGACCACAGCCTGACTGAGCAGGATGACAGGACTCC...GAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp CCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTCTCGCTGTTATCATTaGATGCTCGCCCCGGATATG +
Preference number: 4 (lower is better)
Translates to: PCGHKEYACKVLHLQCHHSRCYH*MLAPDM
Trigger: CATATCCGGGGCGAGCATGCAATGATAACAGCGAGA...ATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACGCTGATTTGATGCCATaGCCTCCATTGGCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHADLMP*PPLAGV
Trigger: CACTCCAGCCAATGGAGGGCATGGCATCAAATCAGC...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp CAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATGTCCTCCACCTCCAGTaGCATCATTTCCATGTGTCT +
Preference number: 4 (lower is better)
Translates to: QPCGHKEYACKVLHLQCHVLHLQ*HHFHVS
Trigger: AGACACATGGAAATGATGGCACTGGAGGTGGAGGAC...ATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp CAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCCACAGTGGCAGCCCTaGTTACCTTCACTGATTTCT +
Preference number: 4 (lower is better)
Translates to: QPCGHKEYACKVLHLQCHPQWQP*LPSLIS
Trigger: AGAAATCAGTGAAGGTAAGCAGGGCTGCCACTGTGG...ATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp CTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCAGGATGTGCTTAAGCTaGCAAATGGCATCCCGATCA +
Preference number: 4 (lower is better)
Translates to: LQPCGHKEYACKVLHLQCRMCLS*QMASRS
Trigger: TGATCGGGATGCCATTTGGCAGCTTAAGCACATCCT...GCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCCCTGCTGGCAGGATGTaGTTAAGCTGCCAAATGGCA +
Preference number: 4 (lower is better)
Translates to: VVTKSMRARSSTSSAIISPAGRM*LSCQMA
Trigger: TGCCATTTGGCAGCTTAAGCACATCCTGCCAGCAGG...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp CTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCTTTCACTGGGGTACCTaGTTTCCCAGTACATTGGCA +
Preference number: 4 (lower is better)
Translates to: LQPCGHKEYACKVLHLQCFHWGT*FPSTLA
Trigger: TGCCAATGTACTGGGAAAGCAGGTACCCCAGTGAAA...GCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp CAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATTTCATGCCTTGGAGATaGCGGTTTGTGGTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: QPCGHKEYACKVLHLQCHFMPWR*RFVVRL
Trigger: AAGCCTGACCACAAACCGGCATCTCCAAGGCATGAA...ATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp CTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCTCATCCTTTTCTaGCTCTGGATGCTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: LQPCGHKEYACKVLHLQCHLILF*LWMLLR
Trigger: CCTGAGAAGCATCCAGAGGCAGAAAAGGATGAGATG...GCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp ACTCAAGAGCATACTAAAGATTGGGCATTTCCCAAGTATGGTGAGCCAAGCTCCGATGACCTATCCCCTTaGCGCTCCTTGCCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: TQEHTKDWAFPKYGEPSSDDLSP*RSLPCR
Trigger: GCGGCAGGGCAAGGAGCGGCAAGGGGATAGGTCATC...GGAGCTTGGCTCACCATACTTGGGAAATGCCCAATCTTTAGTATGCTCTTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR GCA 90 bp GCCTCTAATAAGGTGTCAACAGCGGACAGGTGTGCAGAAATGACACAAAATGGGCCTCTCACCAGGCAATaGAGGGAGCCGGAGGATCCT +
Preference number: 4 (lower is better)
Translates to: ASNKVSTADRCAEMTQNGPLTRQ*REPEDP
Trigger: AGGATCCTCCGGCTCCCTGCATTGCCTGGTGAGAGG...CCCATTTTGTGTCATTTCTGCACACCTGTCCGCTGTTGACACCTTATTAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR GCA 90 bp GCTGGCAACTCTCTGAGCCCTCTTCTGGGTTTAGGTGGGAAGAGAAATGAAGTGGGTCTCCGTGACCTTTaGAGAGGATGGTGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: AGNSLSPLLGLGGKRNEVGLRDL*RGWWLQ
Trigger: TTGGAGCCACCATCCTCTGCAAAGGTCACGGAGACC...CACTTCATTTCTCTTCCCACCTAAACCCAGAAGAGGGCTCAGAGAGTTGCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR GCA 90 bp GGAGGAGGGGCCAAGGGAGCTACTCAGTTGTCTATGATGCAGAGGTGTGAAAAAGGTCTCCGTGACCTTTaGAGAGGATGGTGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: GGGAKGATQLSMMQRCEKGLRDL*RGWWLQ
Trigger: TTGGAGCCACCATCCTCTGCAAAGGTCACGGAGACC...TTTTTCACACCTCTGCATCATAGACAACTGAGTAGCTCCCTTGGCCCCTCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR CCA 90 bp GTGATGCTGACATTAACAAGAGGCAGTCACAGCAGTGTGTCTCACATGGGCTCCAGTCAGAATCACTGGTaGTGTGCACCAGGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: VMLTLTRGSHSSVSHMGSSQNHW*CAPGSH
Trigger: GTGGGACCCTGGTGCACACCACCAGTGATTCTGACT...GGAGCCCATGTGAGACACACTGCTGTGACTGCCTCTTGTTAATGTCAGCATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CCA 90 bp CTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCTGCTCAGTCAGGCTGTaGTCAGGACTTTTGGAATCA +
Preference number: 4 (lower is better)
Translates to: LQPCGHKEYACKVLHLQCCSVRL*SGLLES
Trigger: TGATTCCAAAAGTCCTGACCACAGCCTGACTGAGCA...GCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CCA 90 bp CCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTGTGTCTTTTGTCTTTaGGGGTGGCCAGACAGCTTG +
Preference number: 4 (lower is better)
Translates to: PCGHKEYACKVLHLQCHHCVFCL*GWPDSL
Trigger: CAAGCTGTCTGGCCACCCCCAAAGACAAAAGACACA...ATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp TCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCATGCCCTCCATTGGCTaGAGTGCTGCATGGATGTCT +
Preference number: 4 (lower is better)
Translates to: SRTSCNPVVTKSMRARSSMPSIG*SAAWMS
Trigger: AGACATCCATGCAGCACTCCAGCCAATGGAGGGCAT...GGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGCCCAGCACTCACAGGTaGCATTGGAGGTGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLPSTHR*HWRCGR
Trigger: TCTCCCGCACCTCCAATGCCACCTGTGAGTGCTGGG...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp CCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATATTTGCTCTCCTGTCTaGAAACTGCCTCCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: PCGHKEYACKVLHLQCHHICSPV*KLPPGD
Trigger: ATCCCCAGGAGGCAGTTTCCAGACAGGAGAGCAAAT...ATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp ATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTTTCCTGAGGGGCTGCTaGCTGGCAGGCATATCCTGG +
Preference number: 4 (lower is better)
Translates to: IFQERPATLWSQRVCVQGFLRGC*LAGISW
Trigger: CCAGGATATGCCTGCCAGCCAGCAGCCCCTCAGGAA...ACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp CCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTACAGCCTGGTTCCTaGAAAAAGAGCCTGCAAGCG +
Preference number: 4 (lower is better)
Translates to: PCGHKEYACKVLHLQCHHLQPGS*KKSLQA
Trigger: CGCTTGCAGGCTCTTTTTCCAGGAACCAGGCTGTAA...ATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp TTCCCAAGTATGGTGAGCCAAGCTCCCTGTGATTCTTCTGGCACTAAAAGGGTTGGAGATGCCGGTTTGTaGTCAGGCTTCCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: FPSMVSQAPCDSSGTKRVGDAGL*SGFPGS
Trigger: GGAGCCTGGGAAGCCTGACCACAAACCGGCATCTCC...AACCCTTTTAGTGCCAGAAGAATCACAGGGAGCTTGGCTCACCATACTTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp GACACTGCTTTGCAGGCTAGCACAACTAGAGTTCCTCAAGGTTTGGGGGAAGACTGTTCGTCCGGCTCCTaGCTGAGGCTGATGATGTCT +
Preference number: 4 (lower is better)
Translates to: DTALQASTTRVPQGLGEDCSSGS*LRLMMS
Trigger: AGACATCATCAGCCTCAGCCAGGAGCCGGACGAACA...GTCTTCCCCCAAACCTTGAGGAACTCTAGTTGTGCTAGCCTGCAAAGCAGTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp CTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTGTTCGTCCGGCTCCTaGCTGAGGCTGATGATGTCT +
Preference number: 4 (lower is better)
Translates to: LSRTSCNPVVTKSMRARSCSSGS*LRLMMS
Trigger: AGACATCATCAGCCTCAGCCAGGAGCCGGACGAACA...GGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp AAAGGTAGCTGGAAGCAGGAAACTTCTCCCTGTATGGGCTTCCCAGCTGCAGGGACAGGTCCTGAACTTTaGCCACCACTTTGGAGACAG +
Preference number: 4 (lower is better)
Translates to: KGSWKQETSPCMGFPAAGTGPEL*PPLWRQ
Trigger: CTGTCTCCAAAGTGGTGGCCAAAGTTCAGGACCTGT...CCCTGCAGCTGGGAAGCCCATACAGGGAGAAGTTTCCTGCTTCCAGCTACCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp AACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACACCTTGCCCTGCCGCCTaGAGCCATGAGCCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: NKHLVTHLSRTSCNPVVTPCPAA*SHEPQP
Trigger: AGGCTGGGGCTCATGGCTCCAGGCGGCAGGGCAAGG...TGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp TGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCAGAAACAAGGACTTGTaGCCACCAAGGGGCAACCCG +
Preference number: 4 (lower is better)
Translates to: CGHKEYACKVLHLQCHHFRNKDL*PPRGNP
Trigger: CGGGTTGCCCCTTGGTGGCCACAAGTCCTTGTTTCT...GAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp ACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGGCTGGGGCTCAGCTGTaGTCTTCCCTGGCCCCAAGC +
Preference number: 4 (lower is better)
Translates to: TFSDTSFKNVLQPCGHKEAGAQL*SSLAPS
Trigger: GCTTGGGGCCAGGGAAGACCACAGCTGAGCCCCAGC...CTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp AAAGGTAGCTGGAAGCAGGAAACTTCTCCCTGTATGGGCTTCCCAGCTGCAGGGATTCACCCCTCTTTCTaGACTGCTGGCAACTCTCTG +
Preference number: 4 (lower is better)
Translates to: KGSWKQETSPCMGFPAAGIHPSF*TAGNSL
Trigger: CAGAGAGTTGCCAGCAGTCCAGAAAGAGGGGTGAAT...CCCTGCAGCTGGGAAGCCCATACAGGGAGAAGTTTCCTGCTTCCAGCTACCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
3UTR CAA 72 bp TCAAGTGGCTCCCAGTCTGCTGACTTCTCTTTGGGTTaGGCCAATGGGAATGACGATGAGGGACCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: SSGSQSADFSLG*ANGNDDEGPES
Trigger: ACTCTCTGGTCCCTCATCGTCATTCCCATTGGCCAAACCCAAAGAGAAGTCAGCAGACTGGGAGCCACTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR CAA 72 bp ATAGCCTCAAGTGGCTCCCAGTCTGCTGACTTCTCTTaGGGTTTGGCCAATGGGAATGACGATGAGGGACCA +
Preference number: 4 (lower is better)
Translates to: IASSGSQSADFS*GLANGNDDEGP
Trigger: TGGTCCCTCATCGTCATTCCCATTGGCCAAACCCAAAGAGAAGTCAGCAGACTGGGAGCCACTTGAGGCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR TCA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCAGGTGGCCAGACAGCTTaGAGTCTGCCAGGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: LFSNPISLATQTGFICVAGGQTA*SLPGVL
Trigger: CAGGACTCCTGGCAGACTTCAAGCTGTCTGGCCACC...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp TGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCTGCTCGCCCCGGATATaGAATGCCCGAAGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: CGHKEYACKVLHLQCHHFCSPRI*NARSSN
Trigger: GTTTGAACTTCGGGCATTTCATATCCGGGGCGAGCA...GAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp AAGCACACCCAAGGCTGTGCTTGCTCAGGTATTACATTTTCTCCTGGGAGTTGGGGCAATGCCTTCTGCTaGTTTGATGCCATGCCCTCC +
Preference number: 4 (lower is better)
Translates to: KHTQGCACSGITFSPGSWGNAFC*FDAMPS
Trigger: GGAGGGCATGGCATCAAATCAGCAGAAGGCATTGCC...CCAACTCCCAGGAGAAAATGTAATACCTGAGCAAGCACAGCCTTGGGTGTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp CATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGGGCAATGCCTTCTGCTaGTTTGATGCCATGCCCTCC +
Preference number: 4 (lower is better)
Translates to: HLSRTSCNPVVTKSMRARGNAFC*FDAMPS
Trigger: GGAGGGCATGGCATCAAATCAGCAGAAGGCATTGCC...CCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp AAACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACCAAAGATCCAAGTCCTaGGGGGAGGGGCGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: KQTFSDTSFKNVLQPCGHQRSKS*GEGRRG
Trigger: CCCCCTCCGCCCCTCCCCTCAGGACTTGGATCTTTG...GTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp GCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCAGGCAACTGTCCTCAATaGTCTTTTCTCTCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: ATLWSQRVCVQGPPPPVPGNCPQ*SFLSSV
Trigger: CACAGAAGAGAGAAAAGATCATTGAGGACAGTTGCC...TGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp GCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCACCTGCTTACCTTCACTaGTTTCTCGTAAGCATCCTA +
Preference number: 4 (lower is better)
Translates to: ATLWSQRVCVQGPPPPVPPAYLH*FLVSIL
Trigger: TAGGATGCTTACGAGAAATCAGTGAAGGTAAGCAGG...TGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTCGCCCGGCCCGGGCCTaGTGCTTTTTACCTAACGTG +
Preference number: 4 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSRPARA*CFLPNV
Trigger: CACGTTAGGTAAAAAGCATCAGGCCCGGGCCGGGCG...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCAATCTCAGTGGCGCTaGGCTACCTTCTTTATGCCT +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHQSQWR*ATFFMP
Trigger: AGGCATAAAGAAGGTAGCTCAGCGCCACTGAGATTG...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp GGAAGAACTATGCCTGGAGCATATGCTTCCATCACCACATCAGTGACTTCAGTCAGCTACTCGGGAGGCTaGGGCAGGAGGATTGCTTAC +
Preference number: 4 (lower is better)
Translates to: GRTMPGAYASITTSVTSVSYSGG*GRRIAY
Trigger: GTAAGCAATCCTCCTGCCTCAGCCTCCCGAGTAGCT...GACTGAAGTCACTGATGTGGTGATGGAAGCATATGCTCCAGGCATAGTTCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR TCA 90 bp TCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCTGCAGAGAAAGCAGCTaGCAGTCATCTCCAGCAATG +
Preference number: 4 (lower is better)
Translates to: SRTSCNPVVTKSMRARSSCRESS*QSSPAM
Trigger: CATTGCTGGAGATGACTGTCAGCTGCTTTCTCTGCA...GGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp CGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAAATTGGAGGGTACAATaGGTGCCTTCCATTATGCCT +
Preference number: 4 (lower is better)
Translates to: RPATLWSQRVCVQGPPPPNWRVQ*VPSIMP
Trigger: AGGCATAATGGAAGGCACTCATTGTACCCTCCAATT...TGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp GACACTGCTTTGCAGGCTAGCACAACTAGAGTTCCTCAAGGTTTGGGGGAAGACGAGGCTGATGATGTCTaGCTCCTCCCTGACTTGGTA +
Preference number: 4 (lower is better)
Translates to: DTALQASTTRVPQGLGEDEADDV*LLPDLV
Trigger: TACCAAGTCAGGGAGGAGTCAGACATCATCAGCCTC...GTCTTCCCCCAAACCTTGAGGAACTCTAGTTGTGCTAGCCTGCAAAGCAGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR TCA 90 bp ACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAGTTTCTGGGCGAGTGTaGGGGACACTCGTGTGGACA +
Preference number: 4 (lower is better)
Translates to: THLSRTSCNPVVTKSMRAVSGRV*GTLVWT
Trigger: TGTCCACACGAGTGTCCCTCACACTCGCCCAGAAAC...TGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp CATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGAGGCGAGGGAACAGGTaGCGTCTGTTTGTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: HLSRTSCNPVVTKSMRARRRGNR*RLFVCA
Trigger: AGCACACACAAACAGACGTCACCTGTTCCCTCGCCT...CCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCGTGGATCCAAGCCATTaGTGGAATCATCCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: VVTKSMRARSSTSSAIISVDPSH*WNHPAE
Trigger: CTCAGCAGGATGATTCCAGCAATGGCTTGGATCCAC...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR GCA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCTCTCTTGGTCAGCATTaGAGCCCATCTCTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: VVTKSMRARSSTSSAIISSLGQH*SPSLLS
Trigger: GGAGAGAAGAGATGGGCTGCAATGCTGACCAAGAGA...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR GCA 90 bp CTTTGTGCCCTTGTACTAAACTCCCGTGTCGTGTGGTATGACAACACCAGCATGGGAGTCCTGTCATCCTaGTCAGTCAGGCTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: LCALVLNSRVVWYDNTSMGVLSS*SVRLWS
Trigger: TGACCACAGCCTGACTGAGCAGGATGACAGGACTCC...CATGCTGGTGTTGTCATACCACACGACACGGGAGTTTAGTACAAGGGCACAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR GCA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCTCTCGCTGTTATCATTaGATGCTCGCCCCGGATATG +
Preference number: 4 (lower is better)
Translates to: VVTKSMRARSSTSSAIISSRCYH*MLAPDM
Trigger: CATATCCGGGGCGAGCATGCAATGATAACAGCGAGA...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCCTCCATTGGCTGGAGTaGTGCATGGATGTCTTTGTG +
Preference number: 4 (lower is better)
Translates to: VVTKSMRARSSTSSAIISLHWLE*CMDVFV
Trigger: CACAAAGACATCCATGCAGCACTCCAGCCAATGGAG...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp TTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATAGGGGGAGGGATGGATaGGGGAGGCGGAGGCAATGC +
Preference number: 4 (lower is better)
Translates to: FSDTSFKNVLQPCGHKEYRGRDG*GRRRQC
Trigger: GCATTGCCTCCGCCTCCCGCATCCATCCCTCCCCCT...ATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp GGAGGAGGGGCCAAGGGAGCTACTCAGTTGTCTATGATGCAGAGGTGTGAAAAAGGGGTGCAGAATCTCTaGTGGCCCAGAAAAACCACA +
Preference number: 4 (lower is better)
Translates to: GGGAKGATQLSMMQRCEKGVQNL*WPRKTT
Trigger: TGTGGTTTTTCTGGGCCAGCAGAGATTCTGCACCCC...TTTTTCACACCTCTGCATCATAGACAACTGAGTAGCTCCCTTGGCCCCTCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp CGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCATCATCCTACTTCACATaGCTATCAGCCAAGGTCATG +
Preference number: 4 (lower is better)
Translates to: RPATLWSQRVCVQGPPPPSSYFT*LSAKVM
Trigger: CATGACCTTGGCTGATAGGCATGTGAAGTAGGATGA...TGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp TGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCCTCAAACCTCCCGCTaGTCTCACCATCAAGCCTAT +
Preference number: 4 (lower is better)
Translates to: CGHKEYACKVLHLQCHHFPQTSR*SHHQAY
Trigger: ATAGGCTTGATGGTGAGAGCAGCGGGAGGTTTGAGG...GAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp GGAGGAGGGGCCAAGGGAGCTACTCAGTTGTCTATGATGCAGAGGTGTGAAAAACCTCAAACCTCCCGCTaGTCTCACCATCAAGCCTAT +
Preference number: 4 (lower is better)
Translates to: GGGAKGATQLSMMQRCEKPQTSR*SHHQAY
Trigger: ATAGGCTTGATGGTGAGAGCAGCGGGAGGTTTGAGG...TTTTTCACACCTCTGCATCATAGACAACTGAGTAGCTCCCTTGGCCCCTCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp GCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCAAAGTTCAGATCCTCCTaGTACACTGAACACAAGCTC +
Preference number: 4 (lower is better)
Translates to: ATLWSQRVCVQGPPPPVPKFRSS*YTEHKL
Trigger: GAGCTTGTGTTCAGTGTAGCAGGAGGATCTGAACTT...TGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp CGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCACCTGGAAAAAGAGCCTaGAAGCGTGCATTGCTAATT +
Preference number: 4 (lower is better)
Translates to: RPATLWSQRVCVQGPPPPPGKRA*KRALLI
Trigger: AATTAGCAATGCACGCTTGCAGGCTCTTTTTCCAGG...TGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp CGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAAACAGCGGACAGGTGTaGAGAAATGACACAAAATGG +
Preference number: 4 (lower is better)
Translates to: RPATLWSQRVCVQGPPPPNSGQV*RNDTKW
Trigger: CCATTTTGTGTCATTTCTGCACACCTGTCCGCTGTT...TGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp CCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATGGAAGTTCAGTAGATTaGCCATTCCTTGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: PCGHKEYACKVLHLQCHHGSSVD*PFLGKG
Trigger: TCCCTTCCCAAGGAATGGGCAATCTACTGAACTTCC...ATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp CAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCAAGGCCACCCTGCTTaGCATGCTAGTCTAAATGAA +
Preference number: 4 (lower is better)
Translates to: QPCGHKEYACKVLHLQCHQGHPA*HASLNE
Trigger: TTCATTTAGACTAGCATGGCAAGCAGGGTGGCCTTG...ATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp GGAAGAACTATGCCTGGAGCATATGCTTCCATCACCACATCAGTGACTTCAGTCCTCACGGACAGCTCTTaGAGCTTCCCCTCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: GRTMPGAYASITTSVTSVLTDSS*SFPSWF
Trigger: GAACCAGGAGGGGAAGCTGCAAGAGCTGTCCGTGAG...GACTGAAGTCACTGATGTGGTGATGGAAGCATATGCTCCAGGCATAGTTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR GCA 90 bp ACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGACGGGGAGCTCTCCCTaGCAGTCACCAGCACTCTGG +
Preference number: 4 (lower is better)
Translates to: TFSDTSFKNVLQPCGHKETGSSP*QSPALW
Trigger: CCAGAGTGCTGGTGACTGGCAGGGAGAGCTCCCCGT...CTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACTTGGAGACAGGTTTCTaGTTGCAAGTCCGCTTAGCC +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHLETGF*LQVRLA
Trigger: GGCTAAGCGGACTTGCAAGCAGAAACCTGTCTCCAA...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp TTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGGATGACCTATCCCCTTaGCGCTCCTTGCCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: LVTHLSRTSCNPVVTKSMDDLSP*RSLPCR
Trigger: GCGGCAGGGCAAGGAGCGGCAAGGGGATAGGTCATC...CATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp TCTACGTGCTTCTCCAGGTCTGTGCCCTTTCTGGGCCCCGGTGACAGGCCTGAACCTAGAACATCCTTATaGTTTCTTTACTGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: STCFSRSVPFLGPGDRPEPRTSL*FLYCCV
Trigger: GACACAGCAGTAAAGAAAGCATAAGGATGTTCTAGG...TTCAGGCCTGTCACCGGGGCCCAGAAAGGGCACAGACCTGGAGAAGCACGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp CTTTGTGCCCTTGTACTAAACTCCCGTGTCGTGTGGTATGACAACACCAGCATGAGTCAGAATCACTGGTaGTGTGCACCAGGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: LCALVLNSRVVWYDNTSMSQNHW*CAPGSH
Trigger: GTGGGACCCTGGTGCACACCACCAGTGATTCTGACT...CATGCTGGTGTTGTCATACCACACGACACGGGAGTTTAGTACAAGGGCACAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp AAGCACACCCAAGGCTGTGCTTGCTCAGGTATTACATTTTCTCCTGGGAGTTGGCAGAGTCAGAATCACTaGTGGTGTGCACCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: KHTQGCACSGITFSPGSWQSQNH*WCAPGS
Trigger: GGACCCTGGTGCACACCACCAGTGATTCTGACTCTG...CCAACTCCCAGGAGAAAATGTAATACCTGAGCAAGCACAGCCTTGGGTGTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CCA 90 bp CTTTGTGCCCTTGTACTAAACTCCCGTGTCGTGTGGTATGACAACACCAGCATGCAGAGTCAGAATCACTaGTGGTGTGCACCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: LCALVLNSRVVWYDNTSMQSQNH*WCAPGS
Trigger: GGACCCTGGTGCACACCACCAGTGATTCTGACTCTG...CATGCTGGTGTTGTCATACCACACGACACGGGAGTTTAGTACAAGGGCACAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTCCACCTGGTCCTGGCTaGGGCGACGCTCTGTCTGAA +
Preference number: 4 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSPPGPG*GDALSE
Trigger: TTCAGACAGAGCGTCGCCCCAGCCAGGACCAGGTGG...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CCA 90 bp AAACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACCCTTCTTCTCCCACCTaGTCCTGGCTGGGGCGACGC +
Preference number: 4 (lower is better)
Translates to: KQTFSDTSFKNVLQPCGHPSSPT*SWLGRR
Trigger: GCGTCGCCCCAGCCAGGACCAGGTGGGAGAAGAAGG...GTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CCA 90 bp GCCTCTAATAAGGTGTCAACAGCGGACAGGTGTGCAGAAATGACACAAAATGGGACTCCAGGGCCGCTCTaGCTCTCTTGGTCAGCATTG +
Preference number: 4 (lower is better)
Translates to: ASNKVSTADRCAEMTQNGTPGPL*LSWSAL
Trigger: CAATGCTGACCAAGAGAGCCAGAGCGGCCCTGGAGT...CCCATTTTGTGTCATTTCTGCACACCTGTCCGCTGTTGACACCTTATTAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CCA 90 bp CTTTGTGCCCTTGTACTAAACTCCCGTGTCGTGTGGTATGACAACACCAGCATGAGAGGGGCCATCCGCTaGCTTAGAATTGGACCGTTC +
Preference number: 4 (lower is better)
Translates to: LCALVLNSRVVWYDNTSMRGAIR*LRIGPF
Trigger: GAACGGTCCAATTCTAAGCCAGCGGATGGCCCCTCT...CATGCTGGTGTTGTCATACCACACGACACGGGAGTTTAGTACAAGGGCACAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp AACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACATGGGGGTGCAAGTCCTaGGGGTGGTGGAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: NKHLVTHLSRTSCNPVVTWGCKS*GWWSRR
Trigger: CCTCCTGCTCCACCACCCCCAGGACTTGCACCCCCA...TGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp CTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCGCTTCATGGGACAACTaGGCTCGATGGCTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: LSRTSCNPVVTKSMRARSASWDN*ARWLVF
Trigger: GAAAACCAGCCATCGAGCCCAGTTGTCCCATGAAGC...GGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp GGCAGGATGTGCTTAAGCTGCCAAATGGCATCCCGATCACCTCCTCTCCAGGAACAGAAAGAAATCCTGTaGTTCCGGCAAGGGGAAAAC +
Preference number: 4 (lower is better)
Translates to: GRMCLSCQMASRSPPLQEQKEIL*FRQGEN
Trigger: GTTTTCCCCTTGCCGGAACCACAGGATTTCTTTCTG...TTCCTGGAGAGGAGGTGATCGGGATGCCATTTGGCAGCTTAAGCACATCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp CTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCCGTCCTGCAACCCTGTaGTCACAAAGAGTATGCGTG +
Preference number: 4 (lower is better)
Translates to: LSRTSCNPVVTKSMRARSRPATL*SQRVCV
Trigger: CACGCATACTCTTTGTGACCACAGGGTTGCAGGACG...GGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCAGGGGCAGGCCACATGTaGAGGCTGGATCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: LFSNPISLATQTGFICVAGAGHM*RLDQEG
Trigger: TCCTTCCTGATCCAGCCTCCACATGTGGCCTGCCCC...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp GACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCCTGGCAGGCATATCCTaGGAAGATGCTCAGGCACCT +
Preference number: 4 (lower is better)
Translates to: DTSFKNVLQPCGHKEYACLAGIS*EDAQAP
Trigger: AGGTGCCTGAGCATCTTCCCAGGATATGCCTGCCAG...GCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp GACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAACGTGGTACATTGGTaGACTTGGGAGGGGGCATCC +
Preference number: 4 (lower is better)
Translates to: DTSFKNVLQPCGHKEYACNVVHW*TWEGAS
Trigger: GGATGCCCCCTCCCAAGTCCACCAATGTACCACGTT...GCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp CATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGAGCAACGTGGTACATTaGTGGACTTGGGAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: HLSRTSCNPVVTKSMRARSNVVH*WTWEGA
Trigger: TGCCCCCTCCCAAGTCCACCAATGTACCACGTTGCT...CCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp GGAGGAGGGGCCAAGGGAGCTACTCAGTTGTCTATGATGCAGAGGTGTGAAAAAGCTGTGTCAGCAACGTaGTACATTGGTGGACTTGGG +
Preference number: 4 (lower is better)
Translates to: GGGAKGATQLSMMQRCEKAVSAT*YIGGLG
Trigger: CCCAAGTCCACCAATGTACCACGTTGCTGACACAGC...TTTTTCACACCTCTGCATCATAGACAACTGAGTAGCTCCCTTGGCCCCTCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCCACTTAAAGCCTGCTaGCAGGATGTGCTTAAGCTG +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHPLKAC*QDVLKL
Trigger: CAGCTTAAGCACATCCTGCCAGCAGGCTTTAAGTGG...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp GCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCAGTCAATGTTACAGCCTaGTTCCTGGAAAAAGAGCCT +
Preference number: 4 (lower is better)
Translates to: ATLWSQRVCVQGPPPPVPVNVTA*FLEKEP
Trigger: AGGCTCTTTTTCCAGGAACCAGGCTGTAACATTGAC...TGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCGAAAAATATGTCGCCTaGATGTTCGTCCGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: VVTKSMRARSSTSSAIISEKYVA*MFVRLL
Trigger: CAGGAGCCGGACGAACATCCAGGCGACATATTTTTC...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCACGCCCTTTTCTTTTaGTCCTCTTCTGTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHHALFF*SSSVEG
Trigger: CCCTTCCACAGAAGAGGACCAAAAGAAAAGGGCGTG...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp ACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAGGGCTGCTGGGCGAATaGCAATCGTCTCCTTACCCT +
Preference number: 4 (lower is better)
Translates to: THLSRTSCNPVVTKSMRAGLLGE*QSSPYP
Trigger: AGGGTAAGGAGACGATTGCCATTCGCCCAGCAGCCC...TGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCCTTGTTTCTCGTTTCTaGGCGAGTGTGAGGGACACT +
Preference number: 4 (lower is better)
Translates to: VVTKSMRARSSTSSAIISLVSRF*ASVRDT
Trigger: AGTGTCCCTCACACTCGCCCAGAAACGAGAAACAAG...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp AAAGGTAGCTGGAAGCAGGAAACTTCTCCCTGTATGGGCTTCCCAGCTGCAGGGTCAGGACCTACTTTGTaGGGCAGATCCAGAAACAAG +
Preference number: 4 (lower is better)
Translates to: KGSWKQETSPCMGFPAAGSGPTL*GRSRNK
Trigger: CTTGTTTCTGGATCTGCCCCACAAAGTAGGTCCTGA...CCCTGCAGCTGGGAAGCCCATACAGGGAGAAGTTTCCTGCTTCCAGCTACCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp GGCAGGATGTGCTTAAGCTGCCAAATGGCATCCCGATCACCTCCTCTCCAGGAATCAGGACCTACTTTGTaGGGCAGATCCAGAAACAAG +
Preference number: 4 (lower is better)
Translates to: GRMCLSCQMASRSPPLQESGPTL*GRSRNK
Trigger: CTTGTTTCTGGATCTGCCCCACAAAGTAGGTCCTGA...TTCCTGGAGAGGAGGTGATCGGGATGCCATTTGGCAGCTTAAGCACATCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR CCA 90 bp AAGCACACCCAAGGCTGTGCTTGCTCAGGTATTACATTTTCTCCTGGGAGTTGGGACCTTTGCAGAGGATaGTGGCTCCAAGGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: KHTQGCACSGITFSPGSWDLCRG*WLQGVS
Trigger: GCTGACACCTTGGAGCCACCATCCTCTGCAAAGGTC...CCAACTCCCAGGAGAAAATGTAATACCTGAGCAAGCACAGCCTTGGGTGTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR CCA 90 bp TTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGGGCACCAACCGAGGTTaGCCTGCTCTGAGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: LVTHLSRTSCNPVVTKSMGTNRG*PALRKA
Trigger: GGCCTTCCTCAGAGCAGGCCAACCTCGGTTGGTGCC...CATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp CATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGCAAAAATGGACAGGCTaGTCCCGCTCTGTAGCCCAG +
Preference number: 4 (lower is better)
Translates to: HLSRTSCNPVVTKSMRARQKWTG*SRSVAQ
Trigger: CTGGGCTACAGAGCGGGACCAGCCTGTCCATTTTTG...CCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR TCA 90 bp GGAGGAGGGGCCAAGGGAGCTACTCAGTTGTCTATGATGCAGAGGTGTGAAAAACTGGAATCATCCTGCTaGGATGTGGGATTCACGTCT +
Preference number: 4 (lower is better)
Translates to: GGGAKGATQLSMMQRCEKLESSC*DVGFTS
Trigger: AGACGTGAATCCCACATCTCAGCAGGATGATTCCAG...TTTTTCACACCTCTGCATCATAGACAACTGAGTAGCTCCCTTGGCCCCTCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR TCA 90 bp CCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATAAGAGGCACTCTCAGTaGTACCAACACTCGAATTCT +
Preference number: 4 (lower is better)
Translates to: PCGHKEYACKVLHLQCHHKRHSQ*YQHSNS
Trigger: AGAATTCGAGTGTTGGTATCACTGAGAGTGCCTCTT...ATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR TCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACAGCTGGAAGTTGGAATaGCTTCTCTCCAGAGACTTC +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHSWKLE*LLSRDF
Trigger: GAAGTCTCTGGAGAGAAGTCATTCCAACTTCCAGCT...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR TCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACGGTTTTCGAGGACATTaGCTGGAAGAAGAGCCAAGT +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHGFRGH*LEEEPS
Trigger: ACTTGGCTCTTCTTCCAGTCAATGTCCTCGAAAACC...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCGGTTTTCGAGGACATTaGCTGGAAGAAGAGCCAAGT +
Preference number: 4 (lower is better)
Translates to: VVTKSMRARSSTSSAIISGFRGH*LEEEPS
Trigger: ACTTGGCTCTTCTTCCAGTCAATGTCCTCGAAAACC...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp CCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATCAGAAAAGACAGATCTaGAGATTATGCACTGGGCAC +
Preference number: 4 (lower is better)
Translates to: PCGHKEYACKVLHLQCHHQKRQI*RLCTGH
Trigger: GTGCCCAGTGCATAATCTTCAGATCTGTCTTTTCTG...ATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp TCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCTTCTGTGCAAGGAGGTaGTACCCTCAGAAAAGACAG +
Preference number: 4 (lower is better)
Translates to: SRTSCNPVVTKSMRARSSFCARR*YPQKRQ
Trigger: CTGTCTTTTCTGAGGGTATCACCTCCTTGCACAGAA...GGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCCTCTAGTTTGTCCTTaGAAGGCTGGAGATACTCCT +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHPLVCP*KAGDTP
Trigger: AGGAGTATCTCCAGCCTTTCAAGGACAAACTAGAGG...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp CGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAAGTCAACTTGCTGACTaGTTCCTGAGCCATTTTCAA +
Preference number: 4 (lower is better)
Translates to: RPATLWSQRVCVQGPPPPSQLAD*FLSHFQ
Trigger: TTGAAAATGGCTCAGGAATCAGTCAGCAAGTTGACT...TGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp GGCAGGATGTGCTTAAGCTGCCAAATGGCATCCCGATCACCTCCTCTCCAGGAACTGAAGTCAACTTGCTaGCTGATTCCTGAGCCATTT +
Preference number: 4 (lower is better)
Translates to: GRMCLSCQMASRSPPLQELKSTC*LIPEPF
Trigger: AAATGGCTCAGGAATCAGTCAGCAAGTTGACTTCAG...TTCCTGGAGAGGAGGTGATCGGGATGCCATTTGGCAGCTTAAGCACATCCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp CAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATGGCAACTGTCCTCAATaGTCTTTTCTCTCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: QPCGHKEYACKVLHLQCHGNCPQ*SFLSSV
Trigger: CACAGAAGAGAGAAAAGATCATTGAGGACAGTTGCC...ATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp CGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAAGAAAGAGCTGCCTGTaGACAATATTCCACTTGGAA +
Preference number: 4 (lower is better)
Translates to: RPATLWSQRVCVQGPPPPRKSCL*TIFHLE
Trigger: TTCCAAGTGGAATATTGTTCACAGGCAGCTCTTTCT...TGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp GCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCAAGACTGCATGCCATCTaGTATTCAATTCCTCAACCA +
Preference number: 4 (lower is better)
Translates to: ATLWSQRVCVQGPPPPVPRLHAI*YSIPQP
Trigger: TGGTTGAGGAATTGAATATCAGATGGCATGCAGTCT...TGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCAATGATCTGCATCAATaGCACTGGCCAAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: VVTKSMRARSSTSSAIISNDLHQ*HWPREK
Trigger: CTTCTCCCTTGGCCAGTGTCATTGATGCAGATCATT...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp TCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACAGGTGTGCAGAAATaGCACAAAATGGGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: SRTSCNPVVTKSMRARSSTGVQK*HKMGFP
Trigger: TGGGAAGCCCATTTTGTGTCATTTCTGCACACCTGT...GGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp CCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATAGCAGACCTACTGAATaGGGCTTAATTTGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: PCGHKEYACKVLHLQCHHSRPTE*GLICFP
Trigger: AGGGAAGCAAATTAAGCCTCATTCAGTAGGTCTGCT...ATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp TTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATACATGGGCTCCTTGGTaGCAGCGGAGCTCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: FSDTSFKNVLQPCGHKEYTWAPW*QRSSLS
Trigger: GGACAGGGAGCTCCGCTGTCACCAAGGAGCCCATGT...ATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp AAACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACACATGGGCTCCTTGGTaGCAGCGGAGCTCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: KQTFSDTSFKNVLQPCGHTWAPW*QRSSLS
Trigger: GGACAGGGAGCTCCGCTGTCACCAAGGAGCCCATGT...GTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp TCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCTCGTGGGAGTCTGCTTaGAAAATATGTCGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: SRTSCNPVVTKSMRARSSSWESA*KICRLD
Trigger: ATCCAGGCGACATATTTTTCAAGCAGACTCCCACGA...GGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp GCCTCTAATAAGGTGTCAACAGCGGACAGGTGTGCAGAAATGACACAAAATGGGCAAGCCCAGTGTCCTTaGAAGCCGTCTCAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: ASNKVSTADRCAEMTQNGQAQCP*KPSQSS
Trigger: GGAGCTTTGAGACGGCTTTCAAGGACACTGGGCTTG...CCCATTTTGTGTCATTTCTGCACACCTGTCCGCTGTTGACACCTTATTAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR TCA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTGACAAACCTGTTTGCTaGTGCTCCAGCCCGCTCGGC +
Preference number: 4 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSDKPVC*CSSPLG
Trigger: GCCGAGCGGGCTGGAGCATCAGCAAACAGGTTTGTC...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp CCCAACAGAAGGTGCATCGCTGGCCTCTGTGACATCCTTATGCTACATCCTGCATTCTCAGGGTCCTGGTaGCTTTCAGACAAACCTGTT +
Preference number: 4 (lower is better)
Translates to: PNRRCIAGLCDILMLHPAFSGSW*LSDKPV
Trigger: AACAGGTTTGTCTGAAAGTCACCAGGACCCTGAGAA...TGCAGGATGTAGCATAAGGATGTCACAGAGGCCAGCGATGCACCTTCTGTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR TCA 90 bp GACACTGCTTTGCAGGCTAGCACAACTAGAGTTCCTCAAGGTTTGGGGGAAGACGCTGGACTGCGAGGCTaGATTATTAAACACCTTGCC +
Preference number: 4 (lower is better)
Translates to: DTALQASTTRVPQGLGEDAGLRG*IIKHLA
Trigger: GGCAAGGTGTTTAATAATTCAGCCTCGCAGTCCAGC...GTCTTCCCCCAAACCTTGAGGAACTCTAGTTGTGCTAGCCTGCAAAGCAGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR TCA 90 bp TTCCCAAGTATGGTGAGCCAAGCTCCCTGTGATTCTTCTGGCACTAAAAGGGTTCTCCTTTGGTCTCCGTaGCCTTTGCAGAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: FPSMVSQAPCDSSGTKRVLLWSP*PLQRMV
Trigger: CACCATCCTCTGCAAAGGTCACGGAGACCAAAGGAG...AACCCTTTTAGTGCCAGAAGAATCACAGGGAGCTTGGCTCACCATACTTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR TCA 90 bp GGGCATTTCCCAAGTATGGTGAGCCAAGCTCCCTGTGATTCTTCTGGCACTAAACATCGCTGGCCTCTGTaGCATCCTTATGCTACATCC +
Preference number: 4 (lower is better)
Translates to: GHFPSMVSQAPCDSSGTKHRWPL*HPYATS
Trigger: GGATGTAGCATAAGGATGTCACAGAGGCCAGCGATG...TTTAGTGCCAGAAGAATCACAGGGAGCTTGGCTCACCATACTTGGGAAATGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR TCA 90 bp AAAGGTAGCTGGAAGCAGGAAACTTCTCCCTGTATGGGCTTCCCAGCTGCAGGGCCATCACCACATCAGTaGCTTCAGTCAAAGGAAAAC +
Preference number: 4 (lower is better)
Translates to: KGSWKQETSPCMGFPAAGPSPHQ*LQSKEN
Trigger: GTTTTCCTTTGACTGAAGTCACTGATGTGGTGATGG...CCCTGCAGCTGGGAAGCCCATACAGGGAGAAGTTTCCTGCTTCCAGCTACCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR GCA 90 bp TATGACAACACCAGCATGTCTGTGCAGATTCTTCTCCAGGAGGGCTTTAGAAGTTTGGGCCATTGGTGCTaGTTCCCTCCTCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: YDNTSMSVQILLQEGFRSLGHWC*FPPLAP
Trigger: AGGAGCCAGAGGAGGGAAGCAGCACCAATGGCCCAA...ACTTCTAAAGCCCTCCTGGAGAAGAATCTGCACAGACATGCTGGTGTTGTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR GCA 90 bp CTTTGTGCCCTTGTACTAAACTCCCGTGTCGTGTGGTATGACAACACCAGCATGTCTGAAGACCACCGTTaGCAGCTTCCAGTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: LCALVLNSRVVWYDNTSMSEDHR*QLPVCC
Trigger: GCAGCAAACTGGAAGCTGGCAACGGTGGTCTTCAGA...CATGCTGGTGTTGTCATACCACACGACACGGGAGTTTAGTACAAGGGCACAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR GCA 90 bp TGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCAGACAGCTTGAAGTCTaGCAGGAGTCCTGTCATCCT +
Preference number: 4 (lower is better)
Translates to: CGHKEYACKVLHLQCHHFRQLEV*QESCHP
Trigger: AGGATGACAGGACTCCTGGCAGACTTCAAGCTGTCT...GAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp GGCAGGATGTGCTTAAGCTGCCAAATGGCATCCCGATCACCTCCTCTCCAGGAAAGCAGCTTGGTATTCTaGTTCAGTGTACTTCAGTCC +
Preference number: 4 (lower is better)
Translates to: GRMCLSCQMASRSPPLQESSLVF*FSVLQS
Trigger: GGACTGAAGTACACTGAAGCAGAATACCAAGCTGCT...TTCCTGGAGAGGAGGTGATCGGGATGCCATTTGGCAGCTTAAGCACATCCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp CTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCTCGCTGTTATCATTaGATGCTCGCCCCGGATATG +
Preference number: 4 (lower is better)
Translates to: LSRTSCNPVVTKSMRARSSRCYH*MLAPDM
Trigger: CATATCCGGGGCGAGCATGCAATGATAACAGCGAGA...GGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp CTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCCATTGGCTGGAGTGCTaGATGGATGTCTTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: LSRTSCNPVVTKSMRARSHWLEC*MDVFVV
Trigger: GACCACAAAGACATCCATGCAGCACTCCAGCCAATG...GGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp CATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGGCTGATTTGATGCCATaGCCTCCATTGGCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: HLSRTSCNPVVTKSMRARADLMP*PPLAGV
Trigger: CACTCCAGCCAATGGAGGGCATGGCATCAAATCAGC...CCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp GACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCCACAAAGAGTATGCGTaGAAGGTCCTCCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: DTSFKNVLQPCGHKEYACHKEYA*KVLHLQ
Trigger: CTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTG...GCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp GTGATGCTGACATTAACAAGAGGCAGTCACAGCAGTGTGTCTCACATGGGCTCCTGGTCACAAAGAGTATaGGTGCAAGGTCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: VMLTLTRGSHSSVSHMGSWSQRV*VQGPPP
Trigger: AGGTGGAGGACCTTGCACGCATACTCTTTGTGACCA...GGAGCCCATGTGAGACACACTGCTGTGACTGCCTCTTGTTAATGTCAGCATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp GGCAGGATGTGCTTAAGCTGCCAAATGGCATCCCGATCACCTCCTCTCCAGGAATGGAGAGAAAGATGCTaGAGGATTTTGCTGCAACAG +
Preference number: 4 (lower is better)
Translates to: GRMCLSCQMASRSPPLQEWRERC*RILLQQ
Trigger: CTGTTGCAGCAAAATCCTGCAGCATCTTTCTCTCCA...TTCCTGGAGAGGAGGTGATCGGGATGCCATTTGGCAGCTTAAGCACATCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp CTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCTGATGTCAACTCCTTaGATGGTAACTTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LQPCGHKEYACKVLHLQCLMSTP*MVTCSP
Trigger: TGGAGAACAAGTTACCATGCAAGGAGTTGACATCAG...GCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp GCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCAACCCAAGGCTGTGCTTaGTCAGGTATTACATTTTCT +
Preference number: 4 (lower is better)
Translates to: ATLWSQRVCVQGPPPPVPTQGCA*SGITFS
Trigger: AGAAAATGTAATACCTGAGCAAGCACAGCCTTGGGT...TGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCCAAAATGTAAAAGGTaGTCTGCCGCTGGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHPKCKR*SAAGSL
Trigger: AAGAGACCCAGCGGCAGAGCACCTTTTACATTTTGG...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp AAGCACACCCAAGGCTGTGCTTGCTCAGGTATTACATTTTCTCCTGGGAGTTGGCATATCCTGGGAAGATaGTCAGGCACCTGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: KHTQGCACSGITFSPGSWHILGR*SGTWQV
Trigger: GACTTGCCAGGTGCCTGAGCATCTTCCCAGGATATG...CCAACTCCCAGGAGAAAATGTAATACCTGAGCAAGCACAGCCTTGGGTGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp GTGATGCTGACATTAACAAGAGGCAGTCACAGCAGTGTGTCTCACATGGGCTCCCCACAGTGGCAGCCCTaGTTACCTTCACTGATTTCT +
Preference number: 4 (lower is better)
Translates to: VMLTLTRGSHSSVSHMGSPQWQP*LPSLIS
Trigger: AGAAATCAGTGAAGGTAAGCAGGGCTGCCACTGTGG...GGAGCCCATGTGAGACACACTGCTGTGACTGCCTCTTGTTAATGTCAGCATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACAGGATGTGCTTAAGCTaGCAAATGGCATCCCGATCA +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHRMCLS*QMASRS
Trigger: TGATCGGGATGCCATTTGGCAGCTTAAGCACATCCT...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACGGAGGGGAGACTGCATaGCATCTGATATTCAATTCC +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHGGETA*HLIFNS
Trigger: GGAATTGAATATCAGATGGCATGCAGTCTCCCCTCC...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp CAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATGCTCATCCCATTGCTTaGAAACTCACAAGATACCAG +
Preference number: 4 (lower is better)
Translates to: QPCGHKEYACKVLHLQCHAHPIA*KLTRYQ
Trigger: CTGGTATCTTGTGAGTTTGCAAGCAATGGGATGAGC...ATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp TCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCGGAGGGTACAATGAGTaGCTTCCATTATGCCTACCT +
Preference number: 4 (lower is better)
Translates to: SRTSCNPVVTKSMRARSSGGYNE*LPLCLP
Trigger: AGGTAGGCATAATGGAAGGCACTCATTGTACCCTCC...GGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp CTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTTGGAGACAGGTTTCTaGTTGCAAGTCCGCTTAGCC +
Preference number: 4 (lower is better)
Translates to: LSRTSCNPVVTKSMRARSLETGF*LQVRLA
Trigger: GGCTAAGCGGACTTGCAAGCAGAAACCTGTCTCCAA...GGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp GACACTGCTTTGCAGGCTAGCACAACTAGAGTTCCTCAAGGTTTGGGGGAAGACACGTCTGTTTGTGTGTaGTGGACTGCGAGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: DTALQASTTRVPQGLGEDTSVCV*WTARLN
Trigger: ATTCAGCCTCGCAGTCCAGCACACACAAACAGACGT...GTCTTCCCCCAAACCTTGAGGAACTCTAGTTGTGCTAGCCTGCAAAGCAGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp CTTCACACACATTCCCCCTTTCATTCATTCCACTGCATTCATCTTTCATCTTTCCCTTCTTCTCCCACCTaGTCCTGGCTGGGGCGACGC +
Preference number: 4 (lower is better)
Translates to: LHTHSPFHSFHCIHLSSFPSSPT*SWLGRR
Trigger: GCGTCGCCCCAGCCAGGACCAGGTGGGAGAAGAAGG...GAAAGATGAAAGATGAATGCAGTGGAATGAATGAAAGGGGGAATGTGTGTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp ACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAACTGCAGGTAGGTCTTaGGACCCTTCTTCTCCCACC +
Preference number: 4 (lower is better)
Translates to: THLSRTSCNPVVTKSMRATAGRS*DPSSPT
Trigger: GGTGGGAGAAGAAGGGTCCCAAGACCTACCTGCAGT...TGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CCA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCGTCTCTCTGTCTGTCTaGACGCACACATTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: VVTKSMRARSSTSSAIISVSLSV*THTFLK
Trigger: CTTCAGAAATGTGTGCGTCCAGACAGACAGAGAGAC...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp CAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATTTTGGGGGTGAGAGCTaGCTTAAAGAGGAGATATTC +
Preference number: 4 (lower is better)
Translates to: QPCGHKEYACKVLHLQCHFGGES*LKEEIF
Trigger: GAATATCTCCTCTTTAAGCCAGCTCTCACCCCCAAA...ATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp GACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCATGCCCTCCATTGGCTaGAGTGCTGCATGGATGTCT +
Preference number: 4 (lower is better)
Translates to: DTSFKNVLQPCGHKEYACMPSIG*SAAWMS
Trigger: AGACATCCATGCAGCACTCCAGCCAATGGAGGGCAT...GCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp CAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATTTCGAGGACATTGACTaGAAGAAGAGCCAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: QPCGHKEYACKVLHLQCHFEDID*KKSQVQ
Trigger: TTGGACTTGGCTCTTCTTCCAGTCAATGTCCTCGAA...ATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp TCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCCAGAAAGAAATCCTGTaGTTCCGGCAAGGGGAAAAC +
Preference number: 4 (lower is better)
Translates to: SRTSCNPVVTKSMRARSSQKEIL*FRQGEN
Trigger: GTTTTCCCCTTGCCGGAACCACAGGATTTCTTTCTG...GGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp AAACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACACTGCCTCCTGGGGATaGGGGTCGTCCAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: KQTFSDTSFKNVLQPCGHTASWG*GSSSCT
Trigger: TGTGCAGCTGGACGACCCCCATCCCCAGGAGGCAGT...GTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp GAAAGACACCATCATCAACATAAGGATTCAAAAGGCAACTGTTGGGCAGTAGGAACTGCCTCCTGGGGATaGGGGTCGTCCAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: ERHHHQHKDSKGNCWAVGTASWG*GSSSCT
Trigger: TGTGCAGCTGGACGACCCCCATCCCCAGGAGGCAGT...TCCTACTGCCCAACAGTTGCCTTTTGAATCCTTATGTTGATGATGGTGTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp ATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCAAGTCCAGGGGTTCTaGAAAGATGCTGGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: IFQERPATLWSQRVCVQGQVQGF*KDAGAR
Trigger: CCTTGCCCCAGCATCTTTCCAGAACCCCTGGACTTG...ACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp ACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTTCCTGAGGGGCTGCTaGCTGGCAGGCATATCCTGG +
Preference number: 4 (lower is better)
Translates to: TFSDTSFKNVLQPCGHKEFLRGC*LAGISW
Trigger: CCAGGATATGCCTGCCAGCCAGCAGCCCCTCAGGAA...CTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp CCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATGCACACCTCCTAACCTaGTTTTTGATACTTCATGGG +
Preference number: 4 (lower is better)
Translates to: PCGHKEYACKVLHLQCHHAHLLT*FLILHG
Trigger: CCCATGAAGTATCAAAAACCAGGTTAGGAGGTGTGC...ATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp TCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCTCAAAAGGCAACTGTTaGGCAGTAGGACCATCACCT +
Preference number: 4 (lower is better)
Translates to: SRTSCNPVVTKSMRARSSSKGNC*AVGPSP
Trigger: AGGTGATGGTCCTACTGCCCAACAGTTGCCTTTTGA...GGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCAAATCCCATCAGCTTaGCCACACAGACTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHQIPSA*PHRLVS
Trigger: TGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTG...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp GGCAGGATGTGCTTAAGCTGCCAAATGGCATCCCGATCACCTCCTCTCCAGGAATCCCTGAATAGCCAGTaGTCTATGGGACTAACCTTT +
Preference number: 4 (lower is better)
Translates to: GRMCLSCQMASRSPPLQESLNSQ*SMGLTF
Trigger: AAAGGTTAGTCCCATAGACCACTGGCTATTCAGGGA...TTCCTGGAGAGGAGGTGATCGGGATGCCATTTGGCAGCTTAAGCACATCCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp TTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGGGAGATGCCGGTTTGTaGTCAGGCTTCCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: LVTHLSRTSCNPVVTKSMGDAGL*SGFPGS
Trigger: GGAGCCTGGGAAGCCTGACCACAAACCGGCATCTCC...CATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp ATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTTGTTCGTCCGGCTCCTaGCTGAGGCTGATGATGTCT +
Preference number: 4 (lower is better)
Translates to: IFQERPATLWSQRVCVQGCSSGS*LRLMMS
Trigger: AGACATCATCAGCCTCAGCCAGGAGCCGGACGAACA...ACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp GGAGGAGGGGCCAAGGGAGCTACTCAGTTGTCTATGATGCAGAGGTGTGAAAAAGAAAAATATGTCGCCTaGATGTTCGTCCGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: GGGAKGATQLSMMQRCEKEKYVA*MFVRLL
Trigger: CAGGAGCCGGACGAACATCCAGGCGACATATTTTTC...TTTTTCACACCTCTGCATCATAGACAACTGAGTAGCTCCCTTGGCCCCTCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR CCA 90 bp CTAGCACCAAGCTCCAAGGACACTGCTTTGCAGGCTAGCACAACTAGAGTTCCTGAAAGAGGAAGGGAGTaGCTGGAACAGATCTTGTCC +
Preference number: 4 (lower is better)
Translates to: LAPSSKDTALQASTTRVPERGRE*LEQILS
Trigger: GGACAAGATCTGTTCCAGCCACTCCCTTCCTCTTTC...AGGAACTCTAGTTGTGCTAGCCTGCAAAGCAGTGTCCTTGGAGCTTGGTGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp TGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCGAAAGAGGAAGGGAGTaGCTGGAACAGATCTTGTCC +
Preference number: 4 (lower is better)
Translates to: CGHKEYACKVLHLQCHHFERGRE*LEQILS
Trigger: GGACAAGATCTGTTCCAGCCACTCCCTTCCTCTTTC...GAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp AGACAGAGGATACAAATCAAAGGTACTATCTGGGGAACTCCCTCCCTCATGCCTCGTCTTGGGAATATCTaGGGGGCAGCTCTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: RQRIQIKGTIWGTPSLMPRLGNI*GAALSP
Trigger: AGGAGAGAGAGCTGCCCCCCAGATATTCCCAAGACG...AGGCATGAGGGAGGGAGTTCCCCAGATAGTACCTTTGATTTGTATCCTCTGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp ACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCACGTCTTGGGAATATCTaGGGGGCAGCTCTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: THLSRTSCNPVVTKSMRARLGNI*GAALSP
Trigger: AGGAGAGAGAGCTGCCCCCCAGATATTCCCAAGACG...TGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp TTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCTCAGCGTGGGCTGCTaGGCGAATGGCAATCGTCTC +
Preference number: 4 (lower is better)
Translates to: LVTHLSRTSCNPVVTKSMLSVGC*ANGNRL
Trigger: GAGACGATTGCCATTCGCCCAGCAGCCCACGCTGAG...CATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp CCCAACAGAAGGTGCATCGCTGGCCTCTGTGACATCCTTATGCTACATCCTGCATCTTCTTATCACCTCTaGGTTGTGAGGAGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: PNRRCIAGLCDILMLHPASSYHL*VVRSQD
Trigger: GTCCTGACTCCTCACAACCCAGAGGTGATAAGAAGA...TGCAGGATGTAGCATAAGGATGTCACAGAGGCCAGCGATGCACCTTCTGTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACTCTTCTTATCACCTCTaGGTTGTGAGGAGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHSSYHL*VVRSQD
Trigger: GTCCTGACTCCTCACAACCCAGAGGTGATAAGAAGA...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp TTCCCAAGTATGGTGAGCCAAGCTCCCTGTGATTCTTCTGGCACTAAAAGGGTTAAGAGCTGCCGGTGCTaGTGGGGATGGCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: FPSMVSQAPCDSSGTKRVKSCRC*WGWLLL
Trigger: AAGAAGAAGCCATCCCCACCAGCACCGGCAGCTCTT...AACCCTTTTAGTGCCAGAAGAATCACAGGGAGCTTGGCTCACCATACTTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp GACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCCTTTGCAGAGGATGGTaGCTCCAAGGTGTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: DTSFKNVLQPCGHKEYACLCRGW*LQGVSR
Trigger: TCTGCTGACACCTTGGAGCCACCATCCTCTGCAAAG...GCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp TTCCCAAGTATGGTGAGCCAAGCTCCCTGTGATTCTTCTGGCACTAAAAGGGTTGACCTTTGCAGAGGATaGTGGCTCCAAGGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: FPSMVSQAPCDSSGTKRVDLCRG*WLQGVS
Trigger: GCTGACACCTTGGAGCCACCATCCTCTGCAAAGGTC...AACCCTTTTAGTGCCAGAAGAATCACAGGGAGCTTGGCTCACCATACTTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp GAAAGACACCATCATCAACATAAGGATTCAAAAGGCAACTGTTGGGCAGTAGGAGGCACCAACCGAGGTTaGCCTGCTCTGAGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: ERHHHQHKDSKGNCWAVGGTNRG*PALRKA
Trigger: GGCCTTCCTCAGAGCAGGCCAACCTCGGTTGGTGCC...TCCTACTGCCCAACAGTTGCCTTTTGAATCCTTATGTTGATGATGGTGTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR CCA 90 bp GCTGGCAACTCTCTGAGCCCTCTTCTGGGTTTAGGTGGGAAGAGAAATGAAGTGGAGTTCCTCAAGGTTTaGGGGAAGACCATACTCCAC +
Preference number: 4 (lower is better)
Translates to: AGNSLSPLLGLGGKRNEVEFLKV*GKTILH
Trigger: GTGGAGTATGGTCTTCCCCCAAACCTTGAGGAACTC...CACTTCATTTCTCTTCCCACCTAAACCCAGAAGAGGGCTCAGAGAGTTGCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp CTACTGAACCACCCAACTTTGATCTGTTCATGTCTATCAATGAACAGGAATGGAGGTCTGTGCCCTTTCTaGGCCCCGGTGACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LLNHPTLICSCLSMNRNGGLCPF*APVTGL
Trigger: CAGGCCTGTCACCGGGGCCCAGAAAGGGCACAGACC...TCCATTCCTGTTCATTGATAGACATGAACAGATCAAAGTTGGGTGGTTCAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR CAA 72 bp CTCAAGGTTTGGGGGAAGACCATACTCCACAAAGGCTaGGGAACATTCCACATCAGTCTCCACCCGCCAAAT +
Preference number: 4 (lower is better)
Translates to: LKVWGKTILHKG*GTFHISLHPPN
Trigger: ATTTGGCGGGTGGAGACTGATGTGGAATGTTCCCAAGCCTTTGTGGAGTATGGTCTTCCCCCAAACCTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320930.7
3UTR CAA 72 bp GCTTTGCAGGCTAGCACAACTAGAGTTCCTCAAGGTTaGGGGGAAGACCATACTCCACAAAGGCTTGGGAAC +
Preference number: 4 (lower is better)
Translates to: ALQASTTRVPQG*GEDHTPQRLGN
Trigger: GTTCCCAAGCCTTTGTGGAGTATGGTCTTCCCCCAAACCTTGAGGAACTCTAGTTGTGCTAGCCTGCAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR TCA 90 bp TTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGGTGGCCAGACAGCTTaGAGTCTGCCAGGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: FSDTSFKNVLQPCGHKEYGGQTA*SLPGVL
Trigger: CAGGACTCCTGGCAGACTTCAAGCTGTCTGGCCACC...ATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp AGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGCACTTTCACAGGGCTTaGGGAAGGTCTCTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: SDTSFKNVLQPCGHKEYAHFHRA*GRSLCL
Trigger: CAGACAGAGAGACCTTCCTCAAGCCCTGTGAAAGTG...CGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp CTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCGGTTTTCGAGGACATTaGCTGGAAGAAGAGCCAAGT +
Preference number: 4 (lower is better)
Translates to: LSRTSCNPVVTKSMRARSGFRGH*LEEEPS
Trigger: ACTTGGCTCTTCTTCCAGTCAATGTCCTCGAAAACC...GGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp CCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATAAGATTCCCACAGTTTaGGATCGTTTTCCATCCAAC +
Preference number: 4 (lower is better)
Translates to: PCGHKEYACKVLHLQCHHKIPTV*DRFPSN
Trigger: GTTGGATGGAAAACGATCTCAAACTGTGGGAATCTT...ATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp CCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATAGTCAACTTGCTGACTaGTTCCTGAGCCATTTTCAA +
Preference number: 4 (lower is better)
Translates to: PCGHKEYACKVLHLQCHHSQLAD*FLSHFQ
Trigger: TTGAAAATGGCTCAGGAATCAGTCAGCAAGTTGACT...ATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp TCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCCTGAAGTCAACTTGCTaGCTGATTCCTGAGCCATTT +
Preference number: 4 (lower is better)
Translates to: SRTSCNPVVTKSMRARSSLKSTC*LIPEPF
Trigger: AAATGGCTCAGGAATCAGTCAGCAAGTTGACTTCAG...GGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp AGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGGGTGGTTTCCTTATGTaGCTCAAGAGCCAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: SDTSFKNVLQPCGHKEYAGGFLM*LKSQGQ
Trigger: CTGACCCTGGCTCTTGAGTCACATAAGGAAACCACC...CGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp TCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCCCTGCTTACCTTCACTaGTTTCTCGTAAGCATCCTA +
Preference number: 4 (lower is better)
Translates to: SRTSCNPVVTKSMRARSSPAYLH*FLVSIL
Trigger: TAGGATGCTTACGAGAAATCAGTGAAGGTAAGCAGG...GGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCATTCAGCACTGGTTCCTaGAGGGTTACGTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: LFSNPISLATQTGFICVAFSTGS*RVTWPQ
Trigger: CTGTGGCCACGTAACCCTTCAGGAACCAGTGCTGAA...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACGTCTGTTCACTAGGATaGAATCCAAAGTGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHVCSLG*NPKWAV
Trigger: TACAGCCCACTTTGGATTTCATCCTAGTGAACAGAC...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp GTGATGCTGACATTAACAAGAGGCAGTCACAGCAGTGTGTCTCACATGGGCTCCATCCTCCTGCTACACTaGACACAAGCTCAACAGCAT +
Preference number: 4 (lower is better)
Translates to: VMLTLTRGSHSSVSHMGSILLLH*TQAQQH
Trigger: ATGCTGTTGAGCTTGTGTTCAGTGTAGCAGGAGGAT...GGAGCCCATGTGAGACACACTGCTGTGACTGCCTCTTGTTAATGTCAGCATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp AGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGAAAACAGGAGGTGCCTaGAGGAGGCTGAGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: SDTSFKNVLQPCGHKEYAKTGGA*RRLRRG
Trigger: ACCTCTTCTCAGCCTCCTTCAGGCACCTCCTGTTTT...CGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp ACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAGACAAGCTGTGTAACTaGGCCCGGTTATGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: THLSRTSCNPVVTKSMRADKLCN*ARLCLD
Trigger: ATCCAGGCATAACCGGGCTCAGTTACACAGCTTGTC...TGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCAGCAGACCTACTGAATaGGGCTTAATTTGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: VVTKSMRARSSTSSAIISSRPTE*GLICFP
Trigger: AGGGAAGCAAATTAAGCCTCATTCAGTAGGTCTGCT...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp CTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCAATAGCCATGGAATATaGAGGAAAAGGACGAGGAAA +
Preference number: 4 (lower is better)
Translates to: LQPCGHKEYACKVLHLQCNSHGI*RKRTRK
Trigger: TTTCCTCGTCCTTTTCCTTCATATTCCATGGCTATT...GCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp TGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCATGGTAAATGTCATCTaGCCAATACTCGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: CGHKEYACKVLHLQCHHFMVNVI*PILGRL
Trigger: CAGCCTCCCGAGTATTGGTCAGATGACATTTACCAT...GAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR TCA 90 bp ACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAGAGGCTGATGATGTCTaGCTCCTCCCTGACTTGGTA +
Preference number: 4 (lower is better)
Translates to: THLSRTSCNPVVTKSMRAEADDV*LLPDLV
Trigger: TACCAAGTCAGGGAGGAGTCAGACATCATCAGCCTC...TGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp CCCAACAGAAGGTGCATCGCTGGCCTCTGTGACATCCTTATGCTACATCCTGCATCTCCCTCTCTGTTGTaGGTTTGTACAGCTCAGTTA +
Preference number: 4 (lower is better)
Translates to: PNRRCIAGLCDILMLHPASPSLL*VCTAQL
Trigger: TAACTGAGCTGTACAAACTCACAACAGAGAGGGAGA...TGCAGGATGTAGCATAAGGATGTCACAGAGGCCAGCGATGCACCTTCTGTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR TCA 90 bp ATCAGGAAGAACTATGCCTGGAGCATATGCTTCCATCACCACATCAGTGACTTCTGGGAGGACAGGTCCTaGACTTTGGCCACCACTTTG +
Preference number: 4 (lower is better)
Translates to: IRKNYAWSICFHHHISDFWEDRS*TLATTL
Trigger: CAAAGTGGTGGCCAAAGTTCAGGACCTGTCCTCCCA...GAAGTCACTGATGTGGTGATGGAAGCATATGCTCCAGGCATAGTTCTTCCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR TCA 90 bp CATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGGCTGGACTGCGAGGCTaGATTATTAAACACCTTGCC +
Preference number: 4 (lower is better)
Translates to: HLSRTSCNPVVTKSMRARAGLRG*IIKHLA
Trigger: GGCAAGGTGTTTAATAATTCAGCCTCGCAGTCCAGC...CCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp ATCAGGAAGAACTATGCCTGGAGCATATGCTTCCATCACCACATCAGTGACTTCAGGCGAGGGAACAGGTaGCGTCTGTTTGTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: IRKNYAWSICFHHHISDFRRGNR*RLFVCA
Trigger: AGCACACACAAACAGACGTCACCTGTTCCCTCGCCT...GAAGTCACTGATGTGGTGATGGAAGCATATGCTCCAGGCATAGTTCTTCCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR TCA 90 bp AAAGGTAGCTGGAAGCAGGAAACTTCTCCCTGTATGGGCTTCCCAGCTGCAGGGCATGGGCACAAGAATTaGTCAAGAGATTCTCAGTTC +
Preference number: 4 (lower is better)
Translates to: KGSWKQETSPCMGFPAAGHGHKN*SRDSQF
Trigger: GAACTGAGAATCTCTTGATCAATTCTTGTGCCCATG...CCCTGCAGCTGGGAAGCCCATACAGGGAGAAGTTTCCTGCTTCCAGCTACCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR GCA 90 bp AGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTCTGAAGACCACCGTTaGCAGCTTCCAGTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: SDTSFKNVLQPCGHKEYASEDHR*QLPVCC
Trigger: GCAGCAAACTGGAAGCTGGCAACGGTGGTCTTCAGA...CGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR GCA 90 bp TGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCTGCACTAAGGACTTCTaGACAGGCTGCGTCAATTTG +
Preference number: 4 (lower is better)
Translates to: CGHKEYACKVLHLQCHHFCTKDF*TGCVNL
Trigger: CAAATTGACGCAGCCTGTGCAGAAGTCCTTAGTGCA...GAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR GCA 90 bp TGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCTTCACGCTCTTCACGTaGAGCAAGTCCTTAGAAGCT +
Preference number: 4 (lower is better)
Translates to: CGHKEYACKVLHLQCHHFFTLFT*SKSLEA
Trigger: AGCTTCTAAGGACTTGCTGCACGTGAAGAGCGTGAA...GAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp CCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATACCCAAGGCTGTGCTTaGTCAGGTATTACATTTTCT +
Preference number: 4 (lower is better)
Translates to: PCGHKEYACKVLHLQCHHTQGCA*SGITFS
Trigger: AGAAAATGTAATACCTGAGCAAGCACAGCCTTGGGT...ATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp CTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCGCACACCCAAGGCTGTaGTTGCTCAGGTATTACATT +
Preference number: 4 (lower is better)
Translates to: LSRTSCNPVVTKSMRARSAHPRL*LLRYYI
Trigger: AATGTAATACCTGAGCAAGCACAGCCTTGGGTGTGC...GGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp GAAAGACACCATCATCAACATAAGGATTCAAAAGGCAACTGTTGGGCAGTAGGACTCCTGTCTGGAAACTaGCTCCTGGGGATGGGGGTC +
Preference number: 4 (lower is better)
Translates to: ERHHHQHKDSKGNCWAVGLLSGN*LLGMGV
Trigger: GACCCCCATCCCCAGGAGGCAGTTTCCAGACAGGAG...TCCTACTGCCCAACAGTTGCCTTTTGAATCCTTATGTTGATGATGGTGTCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp CAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATATTCCTTTCAGTTaGACCAGTAGAAAAGGCGGT +
Preference number: 4 (lower is better)
Translates to: QPCGHKEYACKVLHLQCHHIPFS*TSRKGG
Trigger: ACCGCCTTTTCTACTGGTGCAACTGAAAGGAATATG...ATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp CGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCATCGGCTTTTCTGTTTTaGTTGTCTCGTTCCTTCATT +
Preference number: 4 (lower is better)
Translates to: RPATLWSQRVCVQGPPPPSAFLF*LSRSFI
Trigger: AATGAAGGAACGAGACAAGCAAAACAGAAAAGCCGA...TGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp CTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCTGGCACTTTTCTTGTaGATGATAACACTAGAAGGA +
Preference number: 4 (lower is better)
Translates to: LQPCGHKEYACKVLHLQCLALFL*MITLEG
Trigger: TCCTTCTAGTGTTATCATGCACAAGAAAAGTGCCAG...GCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp CTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCATCATAGAGAAAATGTaGAATCCCAGGCCAATAAGC +
Preference number: 4 (lower is better)
Translates to: LQPCGHKEYACKVLHLQCIIEKM*NPRPIS
Trigger: GCTTATTGGCCTGGGATTGCACATTTTCTCTATGAT...GCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp AAGCACACCCAAGGCTGTGCTTGCTCAGGTATTACATTTTCTCCTGGGAGTTGGAGGCATGCAGGCCAGTaGTTATTTTCCAGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: KHTQGCACSGITFSPGSWRHAGQ*LFSRPK
Trigger: CTTTGGCCTGGAAAATAAGCACTGGCCTGCATGCCT...CCAACTCCCAGGAGAAAATGTAATACCTGAGCAAGCACAGCCTTGGGTGTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp GTGATGCTGACATTAACAAGAGGCAGTCACAGCAGTGTGTCTCACATGGGCTCCAAAAATCTGGCGTTCTaGATCATAGCTGGTGACCCG +
Preference number: 4 (lower is better)
Translates to: VMLTLTRGSHSSVSHMGSKNLAF*IIAGDP
Trigger: CGGGTCACCAGCTATGATGCAGAACGCCAGATTTTT...GGAGCCCATGTGAGACACACTGCTGTGACTGCCTCTTGTTAATGTCAGCATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp TGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCAAAAATCTGGCGTTCTaGATCATAGCTGGTGACCCG +
Preference number: 4 (lower is better)
Translates to: CGHKEYACKVLHLQCHHFKNLAF*IIAGDP
Trigger: CGGGTCACCAGCTATGATGCAGAACGCCAGATTTTT...GAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp CATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTTCATGCCTTGGAGATaGCGGTTTGTGGTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: HLSRTSCNPVVTKSMRARFMPWR*RFVVRL
Trigger: AAGCCTGACCACAAACCGGCATCTCCAAGGCATGAA...CCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp GGCAGGATGTGCTTAAGCTGCCAAATGGCATCCCGATCACCTCCTCTCCAGGAATCTTTCGTGGGAGTCTaGTTGAAAAATATGTCGCCT +
Preference number: 4 (lower is better)
Translates to: GRMCLSCQMASRSPPLQESFVGV*LKNMSP
Trigger: AGGCGACATATTTTTCAAGCAGACTCCCACGAAAGA...TTCCTGGAGAGGAGGTGATCGGGATGCCATTTGGCAGCTTAAGCACATCCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR GCA 90 bp GTGAGCCAAGCTCCCTGTGATTCTTCTGGCACTAAAAGGGTTTACTTTGAATCAAATGCCATCCCCTCCTaGCTCTGTGGAGCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: VSQAPCDSSGTKRVYFESNAIPS*LCGAAV
Trigger: GACTGCAGCTCCACAGAGGCAGGAGGGGATGGCATT...TGATTCAAAGTAAACCCTTTTAGTGCCAGAAGAATCACAGGGAGCTTGGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR GCA 90 bp GACACTGCTTTGCAGGCTAGCACAACTAGAGTTCCTCAAGGTTTGGGGGAAGACCATCTCATCCTTTTCTaGCTCTGGATGCTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: DTALQASTTRVPQGLGEDHLILF*LWMLLR
Trigger: CCTGAGAAGCATCCAGAGGCAGAAAAGGATGAGATG...GTCTTCCCCCAAACCTTGAGGAACTCTAGTTGTGCTAGCCTGCAAAGCAGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR GCA 90 bp CTACTGAACCACCCAACTTTGATCTGTTCATGTCTATCAATGAACAGGAATGGAGCTTCTCCAGGTCTGTaGCCTTTCTGGGCCCCGGTG +
Preference number: 4 (lower is better)
Translates to: LLNHPTLICSCLSMNRNGASPGL*PFWAPV
Trigger: CACCGGGGCCCAGAAAGGGCACAGACCTGGAGAAGC...TCCATTCCTGTTCATTGATAGACATGAACAGATCAAAGTTGGGTGGTTCAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp GTGATGCTGACATTAACAAGAGGCAGTCACAGCAGTGTGTCTCACATGGGCTCCGATCCAAGCCATTGCTaGAATCATCCTGCTGAGATG +
Preference number: 4 (lower is better)
Translates to: VMLTLTRGSHSSVSHMGSDPSHC*NHPAEM
Trigger: CATCTCAGCAGGATGATTCCAGCAATGGCTTGGATC...GGAGCCCATGTGAGACACACTGCTGTGACTGCCTCTTGTTAATGTCAGCATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CCA 90 bp AACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAACCACCCTGGGTTTGTaGTACTCCAGGGCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: NKHLVTHLSRTSCNPVVTTTLGL*YSRAAL
Trigger: CAGAGCGGCCCTGGAGTACCACAAACCCAGGGTGGT...TGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CCA 90 bp TATGACAACACCAGCATGTCTGTGCAGATTCTTCTCCAGGAGGGCTTTAGAAGTTTGACCTCACCACCCTaGGTTTGTGGTACTCCAGGG +
Preference number: 4 (lower is better)
Translates to: YDNTSMSVQILLQEGFRSLTSPP*VCGTPG
Trigger: CCCTGGAGTACCACAAACCCAGGGTGGTGAGGTCAA...ACTTCTAAAGCCCTCCTGGAGAAGAATCTGCACAGACATGCTGGTGTTGTCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp CTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCGTCTCTCTGTCTGTCTaGACGCACACATTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: LSRTSCNPVVTKSMRARSVSLSV*THTFLK
Trigger: CTTCAGAAATGTGTGCGTCCAGACAGACAGAGAGAC...GGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp CATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGGCATGGATGTCTTTGTaGTCATTTGGGGGTGAGAGC +
Preference number: 4 (lower is better)
Translates to: HLSRTSCNPVVTKSMRARAWMSL*SFGGES
Trigger: GCTCTCACCCCCAAATGACCACAAAGACATCCATGC...CCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp AGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGACTCACAGGTGGCATTaGAGGTGCGGGAGACAAAGA +
Preference number: 4 (lower is better)
Translates to: SDTSFKNVLQPCGHKEYATHRWH*RCGRQR
Trigger: TCTTTGTCTCCCGCACCTCCAATGCCACCTGTGAGT...CGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACTTCGAGGACATTGACTaGAAGAAGAGCCAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHFEDID*KKSQVQ
Trigger: TTGGACTTGGCTCTTCTTCCAGTCAATGTCCTCGAA...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp CATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGACTGGGCTCGATGGCTaGTTTTCGAGGACATTGACT +
Preference number: 4 (lower is better)
Translates to: HLSRTSCNPVVTKSMRARTGLDG*FSRTLT
Trigger: AGTCAATGTCCTCGAAAACCAGCCATCGAGCCCAGT...CCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp GACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCGACAACTGGGCTCGATaGCTGGTTTTCGAGGACATT +
Preference number: 4 (lower is better)
Translates to: DTSFKNVLQPCGHKEYACDNWAR*LVFEDI
Trigger: AATGTCCTCGAAAACCAGCCATCGAGCCCAGTTGTC...GCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp CATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGGACAACTGGGCTCGATaGCTGGTTTTCGAGGACATT +
Preference number: 4 (lower is better)
Translates to: HLSRTSCNPVVTKSMRARDNWAR*LVFEDI
Trigger: AATGTCCTCGAAAACCAGCCATCGAGCCCAGTTGTC...CCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACAATATAAAGGCTTCATaGGACAACTGGGCTCGATGG +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHNIKAS*DNWARW
Trigger: CCATCGAGCCCAGTTGTCCCATGAAGCCTTTATATT...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp CCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTCTTCAAACTTGACTTaGGAGGCCAGAAAGAAATCC +
Preference number: 4 (lower is better)
Translates to: PCGHKEYACKVLHLQCHHSSNLT*EARKKS
Trigger: GGATTTCTTTCTGGCCTCCCAAGTCAAGTTTGAAGA...ATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp TGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCTTGTCCTTGAAAGGCTaGAGATACTCCTTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: CGHKEYACKVLHLQCHHFLSLKG*RYSFGD
Trigger: GTCCCCAAAGGAGTATCTCCAGCCTTTCAAGGACAA...GAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGGCTGTGTCAGCAACGTaGTACATTGGTGGACTTGGG +
Preference number: 4 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLAVSAT*YIGGLG
Trigger: CCCAAGTCCACCAATGTACCACGTTGCTGACACAGC...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCAGTTTCCAGGCAGCTaGATTGTTTCTCTCTATAGC +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHQFPGS*IVSLYS
Trigger: GCTATAGAGAGAAACAATCCAGCTGCCTGGAAACTG...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp ACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAGCCAAGGTCTGTGTCTaGCGTCTTGGGAATATCTGG +
Preference number: 4 (lower is better)
Translates to: THLSRTSCNPVVTKSMRAAKVCV*RLGNIW
Trigger: CCAGATATTCCCAAGACGCCAGACACAGACCTTGGC...TGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp GACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCCTTGTTTCTCGTTTCTaGGCGAGTGTGAGGGACACT +
Preference number: 4 (lower is better)
Translates to: DTSFKNVLQPCGHKEYACLVSRF*ASVRDT
Trigger: AGTGTCCCTCACACTCGCCCAGAAACGAGAAACAAG...GCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp AGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGCGGTGCTGGTGGGGATaGCTTCTTCTTATCACCTCT +
Preference number: 4 (lower is better)
Translates to: SDTSFKNVLQPCGHKEYARCWWG*LLLITS
Trigger: AGAGGTGATAAGAAGAAGCCATCCCCACCAGCACCG...CGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp ACTCAAGAGCATACTAAAGATTGGGCATTTCCCAAGTATGGTGAGCCAAGCTCCAGCTGCCGGTGCTGGTaGGGATGGCTTCTTCTTATC +
Preference number: 4 (lower is better)
Translates to: TQEHTKDWAFPKYGEPSSSCRCW*GWLLLI
Trigger: GATAAGAAGAAGCCATCCCCACCAGCACCGGCAGCT...GGAGCTTGGCTCACCATACTTGGGAAATGCCCAATCTTTAGTATGCTCTTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp CTAGCACCAAGCTCCAAGGACACTGCTTTGCAGGCTAGCACAACTAGAGTTCCTATAGGAGGTAATGGCTaGAGGCCCTATAGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: LAPSSKDTALQASTTRVPIGGNG*RPYRKS
Trigger: AGACTTCCTATAGGGCCTCCAGCCATTACCTCCTAT...AGGAACTCTAGTTGTGCTAGCCTGCAAAGCAGTGTCCTTGGAGCTTGGTGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp GACACTGCTTTGCAGGCTAGCACAACTAGAGTTCCTCAAGGTTTGGGGGAAGACATCAAAGGTACTATCTaGGGAACTCCCTCCCTCATG +
Preference number: 4 (lower is better)
Translates to: DTALQASTTRVPQGLGEDIKGTI*GTPSLM
Trigger: CATGAGGGAGGGAGTTCCCCAGATAGTACCTTTGAT...GTCTTCCCCCAAACCTTGAGGAACTCTAGTTGTGCTAGCCTGCAAAGCAGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp CCCAACAGAAGGTGCATCGCTGGCCTCTGTGACATCCTTATGCTACATCCTGCAAAAGACAAAGGTAGCTaGAAGCAGGAAACTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PNRRCIAGLCDILMLHPAKDKGS*KQETSP
Trigger: GGGAGAAGTTTCCTGCTTCCAGCTACCTTTGTCTTT...TGCAGGATGTAGCATAAGGATGTCACAGAGGCCAGCGATGCACCTTCTGTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp GACACTGCTTTGCAGGCTAGCACAACTAGAGTTCCTCAAGGTTTGGGGGAAGACGAGAAAGGTGGGAGTTaGGTTCAGATAAAGGGACAC +
Preference number: 4 (lower is better)
Translates to: DTALQASTTRVPQGLGEDEKGGS*VQIKGH
Trigger: GTGTCCCTTTATCTGAACCCAACTCCCACCTTTCTC...GTCTTCCCCCAAACCTTGAGGAACTCTAGTTGTGCTAGCCTGCAAAGCAGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp ACTCAAGAGCATACTAAAGATTGGGCATTTCCCAAGTATGGTGAGCCAAGCTCCAACCAATCTCCAGGTTaGTGGTGGGAGGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: TQEHTKDWAFPKYGEPSSNQSPG*WWEEAG
Trigger: TCCTGCCTCCTCCCACCACCAACCTGGAGATTGGTT...GGAGCTTGGCTCACCATACTTGGGAAATGCCCAATCTTTAGTATGCTCTTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp CCCAACAGAAGGTGCATCGCTGGCCTCTGTGACATCCTTATGCTACATCCTGCAAGGAAGAACTATGCCTaGAGCATATGCTTCCATCAC +
Preference number: 4 (lower is better)
Translates to: PNRRCIAGLCDILMLHPARKNYA*SICFHH
Trigger: GTGATGGAAGCATATGCTCCAGGCATAGTTCTTCCT...TGCAGGATGTAGCATAAGGATGTCACAGAGGCCAGCGATGCACCTTCTGTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGTGCTCAGTCAGGCTGTaGTCAGGATGGAGATCCAAG +
Preference number: 4 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLCSVRL*SGWRSK
Trigger: CTTGGATCTCCATCCTGACCACAGCCTGACTGAGCA...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616417.5
3UTR CAA 72 bp AGCCTGGTTCCTGGAAAAAGAGCCTGCAAGCGTGCATaGCTAATTCCCATTCACACACTGACTTGGCGCAAT +
Preference number: 4 (lower is better)
Translates to: SLVPGKRACKRA*LIPIHTLTWRN
Trigger: ATTGCGCCAAGTCAGTGTGTGAATGGGAATTAGCAATGCACGCTTGCAGGCTCTTTTTCCAGGAACCAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCATTACTCAGGATCGACTaGGCCACTTCAAGTCCGGCT +
Preference number: 4 (lower is better)
Translates to: LFSNPISLATQTGFICVALLRID*ATSSPA
Trigger: AGCCGGACTTGAAGTGGCTCAGTCGATCCTGAGTAA...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR TCA 90 bp CAGGTTTCCAGAGAGTTAGGTTGCTTTAAAGTTGGCCATGCATTAAATAAAGCTGGGCGACGCTCTGTCTaGAGACCACCGTTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: QVSRELGCFKVGHALNKAGRRSV*RPPLPA
Trigger: AGCTGGCAACGGTGGTCTTCAGACAGAGCGTCGCCC...AGCTTTATTTAATGCATGGCCAACTTTAAAGCAACCTAACTCTCTGGAAACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR TCA 90 bp CTTTGTGCCCTTGTACTAAACTCCCGTGTCGTGTGGTATGACAACACCAGCATGAGCTGGAAGTTGGAATaGCTTCTCTCCAGAGACTTC +
Preference number: 4 (lower is better)
Translates to: LCALVLNSRVVWYDNTSMSWKLE*LLSRDF
Trigger: GAAGTCTCTGGAGAGAAGTCATTCCAACTTCCAGCT...CATGCTGGTGTTGTCATACCACACGACACGGGAGTTTAGTACAAGGGCACAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR TCA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCAAGATTCCCACAGTTTaGGATCGTTTTCCATCCAAC +
Preference number: 4 (lower is better)
Translates to: VVTKSMRARSSTSSAIISKIPTV*DRFPSN
Trigger: GTTGGATGGAAAACGATCTCAAACTGTGGGAATCTT...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp GACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCTTCTGTGCAAGGAGGTaGTACCCTCAGAAAAGACAG +
Preference number: 4 (lower is better)
Translates to: DTSFKNVLQPCGHKEYACFCARR*YPQKRQ
Trigger: CTGTCTTTTCTGAGGGTATCACCTCCTTGCACAGAA...GCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp GGCAGGATGTGCTTAAGCTGCCAAATGGCATCCCGATCACCTCCTCTCCAGGAAGTTTCCAAATTGTCTTaGAGTCACTGCAGAACTCAT +
Preference number: 4 (lower is better)
Translates to: GRMCLSCQMASRSPPLQEVSKLS*SHCRTH
Trigger: ATGAGTTCTGCAGTGACTTCAAGACAATTTGGAAAC...TTCCTGGAGAGGAGGTGATCGGGATGCCATTTGGCAGCTTAAGCACATCCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp CCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATACTTGTTCTCCAGGATaGAGTTTATGGCTATTTGTC +
Preference number: 4 (lower is better)
Translates to: PCGHKEYACKVLHLQCHHTCSPG*SLWLFV
Trigger: GACAAATAGCCATAAACTTCATCCTGGAGAACAAGT...ATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp GGAGGAGGGGCCAAGGGAGCTACTCAGTTGTCTATGATGCAGAGGTGTGAAAAAGTCTGTTCACTAGGATaGAATCCAAAGTGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: GGGAKGATQLSMMQRCEKVCSLG*NPKWAV
Trigger: TACAGCCCACTTTGGATTTCATCCTAGTGAACAGAC...TTTTTCACACCTCTGCATCATAGACAACTGAGTAGCTCCCTTGGCCCCTCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp GACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCATCCTCCTGCTACACTaGACACAAGCTCAACAGCAT +
Preference number: 4 (lower is better)
Translates to: DTSFKNVLQPCGHKEYACILLLH*TQAQQH
Trigger: ATGCTGTTGAGCTTGTGTTCAGTGTAGCAGGAGGAT...GCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp GGAGGAGGGGCCAAGGGAGCTACTCAGTTGTCTATGATGCAGAGGTGTGAAAAATCTTCATGGTGCTTATaGAAACAGGAGGTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: GGGAKGATQLSMMQRCEKSSWCL*KQEVPE
Trigger: TTCAGGCACCTCCTGTTTTCATAAGCACCATGAAGA...TTTTTCACACCTCTGCATCATAGACAACTGAGTAGCTCCCTTGGCCCCTCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACGAAAAACCGTACCAATaGCTTATCTTACTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHEKPYQ*LILLEV
Trigger: CACCTCCAGTAAGATAAGTCATTGGTACGGTTTTTC...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp CGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCATTGCAGATTTCTTTATaGGGTCAAAGTAGCAGACAT +
Preference number: 4 (lower is better)
Translates to: RPATLWSQRVCVQGPPPPLQISL*GQSSRH
Trigger: ATGTCTGCTACTTTGACCTCATAAAGAAATCTGCAA...TGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCAGACAAGCTGTGTAACTaGGCCCGGTTATGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: LFSNPISLATQTGFICVADKLCN*ARLCLD
Trigger: ATCCAGGCATAACCGGGCTCAGTTACACAGCTTGTC...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp GCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATTTCCAACAAAGCATTaGTCTGGAAGTTCAGTAGAT +
Preference number: 4 (lower is better)
Translates to: ATLWSQRVCVQGPPPPVPFPTKH*SGSSVD
Trigger: ATCTACTGAACTTCCAGATCAATGCTTTGTTGGAAA...TGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp CCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTGCTAATGTGTGCCTaGAATCTGATTTCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: PCGHKEYACKVLHLQCHHLLMCA*NLISFL
Trigger: CAAGAAGGAAATCAGATTTCAGGCACACATTAGCAA...ATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCAGAGACAAGTTAGCATaGAGCGAGGAAAAAGGAGAT +
Preference number: 4 (lower is better)
Translates to: VVTKSMRARSSTSSAIISRDKLA*SEEKGD
Trigger: ATCTCCTTTTTCCTCGCTTCATGCTAACTTGTCTCT...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp CTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTTCATACTAGGATGTTaGCTGCCTTCACTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: LSRTSCNPVVTKSMRARSFILGC*LPSLRF
Trigger: GAACCTGAGTGAAGGCAGTCAACATCCTAGTATGAA...GGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp AGACAGAGGATACAAATCAAAGGTACTATCTGGGGAACTCCCTCCCTCATGCCTTGCAGAGAAAGCAGCTaGCAGTCATCTCCAGCAATG +
Preference number: 4 (lower is better)
Translates to: RQRIQIKGTIWGTPSLMPCRESS*QSSPAM
Trigger: CATTGCTGGAGATGACTGTCAGCTGCTTTCTCTGCA...AGGCATGAGGGAGGGAGTTCCCCAGATAGTACCTTTGATTTGTATCCTCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR TCA 90 bp GCTGGCAACTCTCTGAGCCCTCTTCTGGGTTTAGGTGGGAAGAGAAATGAAGTGAATTGGAGGGTACAATaGGTGCCTTCCATTATGCCT +
Preference number: 4 (lower is better)
Translates to: AGNSLSPLLGLGGKRNEVNWRVQ*VPSIMP
Trigger: AGGCATAATGGAAGGCACTCATTGTACCCTCCAATT...CACTTCATTTCTCTTCCCACCTAAACCCAGAAGAGGGCTCAGAGAGTTGCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR TCA 90 bp GACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCTACAGTGCCCTTGTATaGAAATCCTCTGACTTCCCC +
Preference number: 4 (lower is better)
Translates to: DTSFKNVLQPCGHKEYACYSALV*KSSDFP
Trigger: GGGGAAGTCAGAGGATTTTCATACAAGGGCACTGTA...GCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp GACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCTTCTCAGGGTCCTGGTaGCTTTCAGACAAACCTGTT +
Preference number: 4 (lower is better)
Translates to: DTSFKNVLQPCGHKEYACFSGSW*LSDKPV
Trigger: AACAGGTTTGTCTGAAAGTCACCAGGACCCTGAGAA...GCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp TTCCCAAGTATGGTGAGCCAAGCTCCCTGTGATTCTTCTGGCACTAAAAGGGTTATCACCTCTGGGTTGTaGGGAGTCAGGACCTACTTT +
Preference number: 4 (lower is better)
Translates to: FPSMVSQAPCDSSGTKRVITSGL*GVRTYF
Trigger: AAAGTAGGTCCTGACTCCTCACAACCCAGAGGTGAT...AACCCTTTTAGTGCCAGAAGAATCACAGGGAGCTTGGCTCACCATACTTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR TCA 90 bp ATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTATCACCTCTGGGTTGTaGGGAGTCAGGACCTACTTT +
Preference number: 4 (lower is better)
Translates to: IFQERPATLWSQRVCVQGITSGL*GVRTYF
Trigger: AAAGTAGGTCCTGACTCCTCACAACCCAGAGGTGAT...ACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp TCACGCTCTTCACGTGCAGCAAGTCCTGTGATGGCAAACACCAGTTATTACGGACAGTTATTACGGAGCTaGACTCCAAATGCACCCATG +
Preference number: 4 (lower is better)
Translates to: SRSSRAASPVMANTSYYGQLLRS*TPNAPM
Trigger: CATGGGTGCATTTGGAGTTCAGCTCCGTAATAACTG...TCCGTAATAACTGGTGTTTGCCATCACAGGACTTGCTGCACGTGAAGAGCGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558711.1
CDS-3UTR GCA 90 bp GCAATCTACCTTCTCCATCAGGTCCCCCAAGGTTCTCCTACTTCACACACATTCGACTTCTGCACAGGCTaGGTCAATTTGAGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: AIYLLHQVPQGSPTSHTFDFCTG*VNLSKA
Trigger: AGCTTTGCTCAAATTGACGCAGCCTGTGCAGAAGTC...GAATGTGTGTGAAGTAGGAGAACCTTGGGGGACCTGATGGAGAAGGTAGATTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR GCA 90 bp CTTTGTGCCCTTGTACTAAACTCCCGTGTCGTGTGGTATGACAACACCAGCATGTGCACTAAGGACTTCTaGACAGGCTGCGTCAATTTG +
Preference number: 4 (lower is better)
Translates to: LCALVLNSRVVWYDNTSMCTKDF*TGCVNL
Trigger: CAAATTGACGCAGCCTGTGCAGAAGTCCTTAGTGCA...CATGCTGGTGTTGTCATACCACACGACACGGGAGTTTAGTACAAGGGCACAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR GCA 90 bp AGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGAGACAGCTTGAAGTCTaGCAGGAGTCCTGTCATCCT +
Preference number: 4 (lower is better)
Translates to: SDTSFKNVLQPCGHKEYARQLEV*QESCHP
Trigger: AGGATGACAGGACTCCTGGCAGACTTCAAGCTGTCT...CGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp GGAGGAGGGGCCAAGGGAGCTACTCAGTTGTCTATGATGCAGAGGTGTGAAAAAAGCAGCTTGGTATTCTaGTTCAGTGTACTTCAGTCC +
Preference number: 4 (lower is better)
Translates to: GGGAKGATQLSMMQRCEKSSLVF*FSVLQS
Trigger: GGACTGAAGTACACTGAAGCAGAATACCAAGCTGCT...TTTTTCACACCTCTGCATCATAGACAACTGAGTAGCTCCCTTGGCCCCTCCTCC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp CTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCAGTTCAAACTGTGCCTaGAGGTTTTCAATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LQPCGHKEYACKVLHLQCSSNCA*RFSISS
Trigger: AGAAGAAATTGAAAACCTGCAGGCACAGTTTGAACT...GCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp TCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCCCGAAGTTCAAACTGTaGCTGCAGGTTTTCAATTTC +
Preference number: 4 (lower is better)
Translates to: SRTSCNPVVTKSMRARSSPKFKL*LQVFNF
Trigger: GAAATTGAAAACCTGCAGGCACAGTTTGAACTTCGG...GGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCCCGAAGTTCAAACTGTaGCTGCAGGTTTTCAATTTC +
Preference number: 4 (lower is better)
Translates to: VVTKSMRARSSTSSAIISPKFKL*LQVFNF
Trigger: GAAATTGAAAACCTGCAGGCACAGTTTGAACTTCGG...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp AGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGGCCCCGGATATGAAATaGCCGAAGTTCAAACTGTGC +
Preference number: 4 (lower is better)
Translates to: SDTSFKNVLQPCGHKEYAAPDMK*PKFKLC
Trigger: GCACAGTTTGAACTTCGGGCATTTCATATCCGGGGC...CGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp ATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCATTGGCTGGAGTGCTaGATGGATGTCTTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: IFQERPATLWSQRVCVQGHWLEC*MDVFVV
Trigger: GACCACAAAGACATCCATGCAGCACTCCAGCCAATG...ACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp CTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCAACTCATGTAAAAATTaGTCAGGTTTATCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LQPCGHKEYACKVLHLQCNSCKN*SGLSSS
Trigger: GCTGCTGGATAAACCTGAGCAATTTTTACATGAGTT...GCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp CATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTTCACGCTCTTCACGTaGAGCAAGTCCTTAGAAGCT +
Preference number: 4 (lower is better)
Translates to: HLSRTSCNPVVTKSMRARFTLFT*SKSLEA
Trigger: AGCTTCTAAGGACTTGCTGCACGTGAAGAGCGTGAA...CCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCACACAAAGAGTATGCGTaGAAGGTCCTCCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: LFSNPISLATQTGFICVAHKEYA*KVLHLQ
Trigger: CTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTG...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp TTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGTGGGGGTCGTCCAGCTaGACAGTCACAGCACATAAC +
Preference number: 4 (lower is better)
Translates to: LVTHLSRTSCNPVVTKSMWGSSS*TVTAHN
Trigger: GTTATGTGCTGTGACTGTGCAGCTGGACGACCCCCA...CATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTTGGGGGTCGTCCAGCTaGACAGTCACAGCACATAAC +
Preference number: 4 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSWGSSS*TVTAHN
Trigger: GTTATGTGCTGTGACTGTGCAGCTGGACGACCCCCA...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp TGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCTCATCCTACTTCACATaGCTATCAGCCAAGGTCATG +
Preference number: 4 (lower is better)
Translates to: CGHKEYACKVLHLQCHHFSSYFT*LSAKVM
Trigger: CATGACCTTGGCTGATAGGCATGTGAAGTAGGATGA...GAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCACATATCCTGGGAAGATaGTCAGGCACCTGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: LFSNPISLATQTGFICVAHILGR*SGTWQV
Trigger: GACTTGCCAGGTGCCTGAGCATCTTCCCAGGATATG...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp AGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGCAGCCACTTAAAGCCTaGTGGCAGGATGTGCTTAAG +
Preference number: 4 (lower is better)
Translates to: SDTSFKNVLQPCGHKEYAQPLKA*WQDVLK
Trigger: CTTAAGCACATCCTGCCAGCAGGCTTTAAGTGGCTG...CGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp ACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCACAGCCACTTAAAGCCTaGTGGCAGGATGTGCTTAAG +
Preference number: 4 (lower is better)
Translates to: THLSRTSCNPVVTKSMRAQPLKA*WQDVLK
Trigger: CTTAAGCACATCCTGCCAGCAGGCTTTAAGTGGCTG...TGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp GCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCAACTTATGATATTGTGTaGTCTGATGCTGTCAATTGC +
Preference number: 4 (lower is better)
Translates to: ATLWSQRVCVQGPPPPVPTYDIV*SDAVNC
Trigger: GCAATTGACAGCATCAGAGCACACAATATCATAAGT...TGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp TGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCCTGGAAAAAGAGCCTaGAAGCGTGCATTGCTAATT +
Preference number: 4 (lower is better)
Translates to: CGHKEYACKVLHLQCHHFPGKRA*KRALLI
Trigger: AATTAGCAATGCACGCTTGCAGGCTCTTTTTCCAGG...GAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp AGACAGAGGATACAAATCAAAGGTACTATCTGGGGAACTCCCTCCCTCATGCCTTTCATGCCTTGGAGATaGCGGTTTGTGGTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: RQRIQIKGTIWGTPSLMPFMPWR*RFVVRL
Trigger: AAGCCTGACCACAAACCGGCATCTCCAAGGCATGAA...AGGCATGAGGGAGGGAGTTCCCCAGATAGTACCTTTGATTTGTATCCTCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR GCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACTCTTTCGTGGGAGTCTaGTTGAAAAATATGTCGCCT +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHSFVGV*LKNMSP
Trigger: AGGCGACATATTTTTCAAGCAGACTCCCACGAAAGA...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp GAAAGACACCATCATCAACATAAGGATTCAAAAGGCAACTGTTGGGCAGTAGGACTCACGGACAGCTCTTaGAGCTTCCCCTCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: ERHHHQHKDSKGNCWAVGLTDSS*SFPSWF
Trigger: GAACCAGGAGGGGAAGCTGCAAGAGCTGTCCGTGAG...TCCTACTGCCCAACAGTTGCCTTTTGAATCCTTATGTTGATGATGGTGTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR GCA 90 bp GCCTCTAATAAGGTGTCAACAGCGGACAGGTGTGCAGAAATGACACAAAATGGGACGTCTGTTTGTGTGTaGTGGACTGCGAGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: ASNKVSTADRCAEMTQNGTSVCV*WTARLN
Trigger: ATTCAGCCTCGCAGTCCAGCACACACAAACAGACGT...CCCATTTTGTGTCATTTCTGCACACCTGTCCGCTGTTGACACCTTATTAGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR GCA 90 bp AGAATTGATCAAGAGATTCTCAGTTCTCAATATCAGGAAGAACTATGCCTGGAGCAACCGAGGTTGGCCTaGTCTGAGGAAGGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: RIDQEILSSQYQEELCLEQPRLA*SEEGRA
Trigger: AGCCCGGCCTTCCTCAGAGCAGGCCAACCTCGGTTG...CTCCAGGCATAGTTCTTCCTGATATTGAGAACTGAGAATCTCTTGATCAATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR GCA 90 bp ATTATGGAAAAACCTACTGAACCACCCAACTTTGATCTGTTCATGTCTATCAATCTCCCTGCTGAGGGCTaGGGGTCCTGCCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: IMEKPTEPPNFDLFMSINLPAEG*GSCPAA
Trigger: AGCTGCTGGGCAGGACCCGCAGCCCTCAGCAGGGAG...ATTGATAGACATGAACAGATCAAAGTTGGGTGGTTCAGTAGGTTTTTCCATAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp GAAAGACACCATCATCAACATAAGGATTCAAAAGGCAACTGTTGGGCAGTAGGAGGGACTTTGGGCCATTaGTGCTGCTTCCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: ERHHHQHKDSKGNCWAVGGTLGH*CCFPPL
Trigger: CAGAGGAGGGAAGCAGCACCAATGGCCCAAAGTCCC...TCCTACTGCCCAACAGTTGCCTTTTGAATCCTTATGTTGATGATGGTGTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CCA 90 bp CTTTGTGCCCTTGTACTAAACTCCCGTGTCGTGTGGTATGACAACACCAGCATGGCTGCTCATCTCAGGTaGAATCCTTTGAGGATCTTC +
Preference number: 4 (lower is better)
Translates to: LCALVLNSRVVWYDNTSMAAHLR*NPLRIF
Trigger: GAAGATCCTCAAAGGATTCCACCTGAGATGAGCAGC...CATGCTGGTGTTGTCATACCACACGACACGGGAGTTTAGTACAAGGGCACAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp CTTCACACACATTCCCCCTTTCATTCATTCCACTGCATTCATCTTTCATCTTTCGCTGCTCCAGGAGAGTaGGAGTGGCCTTCGGATCAG +
Preference number: 4 (lower is better)
Translates to: LHTHSPFHSFHCIHLSSFAAPGE*EWPSDQ
Trigger: CTGATCCGAAGGCCACTCCCACTCTCCTGGAGCAGC...GAAAGATGAAAGATGAATGCAGTGGAATGAATGAAAGGGGGAATGTGTGTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp TTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGTGTCTCTGGCGACTTTaGCTTGACCTCACCACCCTG +
Preference number: 4 (lower is better)
Translates to: LVTHLSRTSCNPVVTKSMCLWRL*LDLTTL
Trigger: CAGGGTGGTGAGGTCAAGCCAAAGTCGCCAGAGACA...CATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CCA 90 bp CGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTTTCAGATTTTCAATaGTTTCTTCTAGTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: RPATLWSQRVCVQGPPPPVSDFQ*FLLVSL
Trigger: CAGCGAGACTAGAAGAAACCATTGAAAATCTGAAAC...TGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp GCCTCTAATAAGGTGTCAACAGCGGACAGGTGTGCAGAAATGACACAAAATGGGGCATGGATGTCTTTGTaGTCATTTGGGGGTGAGAGC +
Preference number: 4 (lower is better)
Translates to: ASNKVSTADRCAEMTQNGAWMSL*SFGGES
Trigger: GCTCTCACCCCCAAATGACCACAAAGACATCCATGC...CCCATTTTGTGTCATTTCTGCACACCTGTCCGCTGTTGACACCTTATTAGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp ACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAGACAACTGGGCTCGATaGCTGGTTTTCGAGGACATT +
Preference number: 4 (lower is better)
Translates to: THLSRTSCNPVVTKSMRADNWAR*LVFEDI
Trigger: AATGTCCTCGAAAACCAGCCATCGAGCCCAGTTGTC...TGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCAATACTCAAATTCACTaGGGTCCCGAATGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: VVTKSMRARSSTSSAIISNTQIH*GPECQV
Trigger: AACCTGACATTCGGGACCCCAGTGAATTTGAGTATT...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACAATACTCAAATTCACTaGGGTCCCGAATGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHNTQIH*GPECQV
Trigger: AACCTGACATTCGGGACCCCAGTGAATTTGAGTATT...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCACCAGCTCATCCTCTTaGGCTCTGTTTTCATATAAG +
Preference number: 4 (lower is better)
Translates to: VVTKSMRARSSTSSAIISTSSSS*ALFSYK
Trigger: CTTATATGAAAACAGAGCCCAAGAGGATGAGCTGGT...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp GACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCCAGAAAGAAATCCTGTaGTTCCGGCAAGGGGAAAAC +
Preference number: 4 (lower is better)
Translates to: DTSFKNVLQPCGHKEYACQKEIL*FRQGEN
Trigger: GTTTTCCCCTTGCCGGAACCACAGGATTTCTTTCTG...GCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp GTTCCCTTAAATAGTTTTCCATTGTTCCTGCGGCTTAATGAGGGACTTCTTAAACTGGAAACTGCCTCCTaGGGATGGGGGTCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: VPLNSFPLFLRLNEGLLKLETAS*GWGSSS
Trigger: GCTGGACGACCCCCATCCCCAGGAGGCAGTTTCCAG...TTTAAGAAGTCCCTCATTAAGCCGCAGGAACAATGGAAAACTATTTAAGGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp AACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACACTGTCCTCCACCAATTaGGGGGAGAAAGCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: NKHLVTHLSRTSCNPVVTLSSTN*GEKARP
Trigger: AGGCCGAGCTTTCTCCCCCCAATTGGTGGAGGACAG...TGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp GAAAGACACCATCATCAACATAAGGATTCAAAAGGCAACTGTTGGGCAGTAGGACTGTCCTCCACCAATTaGGGGGAGAAAGCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: ERHHHQHKDSKGNCWAVGLSSTN*GEKARP
Trigger: AGGCCGAGCTTTCTCCCCCCAATTGGTGGAGGACAG...TCCTACTGCCCAACAGTTGCCTTTTGAATCCTTATGTTGATGATGGTGTCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp CATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGGCCACATGTGGAGGCTaGATCAGGAAGGAATTTAAG +
Preference number: 4 (lower is better)
Translates to: HLSRTSCNPVVTKSMRARATCGG*IRKEFK
Trigger: CTTAAATTCCTTCCTGATCCAGCCTCCACATGTGGC...CCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp GAAAGACACCATCATCAACATAAGGATTCAAAAGGCAACTGTTGGGCAGTAGGAAGATGCTCAGGCACCTaGCAAGTCCAGGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: ERHHHQHKDSKGNCWAVGRCSGT*QVQGFW
Trigger: CCAGAACCCCTGGACTTGCCAGGTGCCTGAGCATCT...TCCTACTGCCCAACAGTTGCCTTTTGAATCCTTATGTTGATGATGGTGTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp TTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGGTTACGTGGCCACAGTaGCAGCCCTGCTTACCTTCA +
Preference number: 4 (lower is better)
Translates to: LVTHLSRTSCNPVVTKSMVTWPQ*QPCLPS
Trigger: TGAAGGTAAGCAGGGCTGCCACTGTGGCCACGTAAC...CATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACATTATTCTTCAGCACTaGTTCCTGAAGGGTTACGTG +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHIILQH*FLKGYV
Trigger: CACGTAACCCTTCAGGAACCAGTGCTGAAGAATAAT...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp CTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCATGAAGATTCTGCCATaGTGTCTTACAACACTAACA +
Preference number: 4 (lower is better)
Translates to: LQPCGHKEYACKVLHLQCMKILP*CLTTLT
Trigger: TGTTAGTGTTGTAAGACACCATGGCAGAATCTTCAT...GCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp TTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGAGCAACGTGGTACATTaGTGGACTTGGGAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: LVTHLSRTSCNPVVTKSMSNVVH*WTWEGA
Trigger: TGCCCCCTCCCAAGTCCACCAATGTACCACGTTGCT...CATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACAGAAATGACACAAAATaGGCTTCCCAGTCACAGACA +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHRNDTK*ASQSQT
Trigger: TGTCTGTGACTGGGAAGCCCATTTTGTGTCATTTCT...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCAGAAATGACACAAAATaGGCTTCCCAGTCACAGACA +
Preference number: 4 (lower is better)
Translates to: VVTKSMRARSSTSSAIISRNDTK*ASQSQT
Trigger: TGTCTGTGACTGGGAAGCCCATTTTGTGTCATTTCT...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp CGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAAGACATAAAACTGCATaGATCAGGTGCACTTTAGAA +
Preference number: 4 (lower is better)
Translates to: RPATLWSQRVCVQGPPPPRHKTA*IRCTLE
Trigger: TTCTAAAGTGCACCTGATCCATGCAGTTTTATGTCT...TGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp AAGCACACCCAAGGCTGTGCTTGCTCAGGTATTACATTTTCTCCTGGGAGTTGGAGTAAACAGGGTCTATaGTCAAGCAGCCCCATGGAT +
Preference number: 4 (lower is better)
Translates to: KHTQGCACSGITFSPGSWSKQGL*SSSPMD
Trigger: ATCCATGGGGCTGCTTGACCATAGACCCTGTTTACT...CCAACTCCCAGGAGAAAATGTAATACCTGAGCAAGCACAGCCTTGGGTGTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACACTTTTGAACAGGCATaGAGTAAACAGGGTCTATGG +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHTFEQA*SKQGLW
Trigger: CCATAGACCCTGTTTACTCCATGCCTGTTCAAAAGT...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp TCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACTTTTGAACAGGCATaGAGTAAACAGGGTCTATGG +
Preference number: 4 (lower is better)
Translates to: SRTSCNPVVTKSMRARSSTFEQA*SKQGLW
Trigger: CCATAGACCCTGTTTACTCCATGCCTGTTCAAAAGT...GGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp TTCCCAAGTATGGTGAGCCAAGCTCCCTGTGATTCTTCTGGCACTAAAAGGGTTGAAAAATATGTCGCCTaGATGTTCGTCCGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: FPSMVSQAPCDSSGTKRVEKYVA*MFVRLL
Trigger: CAGGAGCCGGACGAACATCCAGGCGACATATTTTTC...AACCCTTTTAGTGCCAGAAGAATCACAGGGAGCTTGGCTCACCATACTTGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp TTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCAGTCACCAGCACTCTaGAAACAGTCATCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: LVTHLSRTSCNPVVTKSMQSPAL*KQSSSG
Trigger: CCCCGAGGATGACTGTTTCCAGAGTGCTGGTGACTG...CATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp ACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGAGCTGCCGGTGCTGGTaGGGATGGCTTCTTCTTATC +
Preference number: 4 (lower is better)
Translates to: TFSDTSFKNVLQPCGHKESCRCW*GWLLLI
Trigger: GATAAGAAGAAGCCATCCCCACCAGCACCGGCAGCT...CTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp CTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCTGTTTGTGTGTGCTaGACTGCGAGGCTGAATTAT +
Preference number: 4 (lower is better)
Translates to: LSRTSCNPVVTKSMRARSSVCVC*TARLNY
Trigger: ATAATTCAGCCTCGCAGTCCAGCACACACAAACAGA...GGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp ACTCAAGAGCATACTAAAGATTGGGCATTTCCCAAGTATGGTGAGCCAAGCTCCCTTTGCAGAGGATGGTaGCTCCAAGGTGTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: TQEHTKDWAFPKYGEPSSLCRGW*LQGVSR
Trigger: TCTGCTGACACCTTGGAGCCACCATCCTCTGCAAAG...GGAGCTTGGCTCACCATACTTGGGAAATGCCCAATCTTTAGTATGCTCTTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp CTAGCACCAAGCTCCAAGGACACTGCTTTGCAGGCTAGCACAACTAGAGTTCCTGGTTTCACTGGTTCCTaGGAATTACTACTTGCCTCT +
Preference number: 4 (lower is better)
Translates to: LAPSSKDTALQASTTRVPGFTGS*ELLLAS
Trigger: AGAGGCAAGTAGTAATTCCCAGGAACCAGTGAAACC...AGGAACTCTAGTTGTGCTAGCCTGCAAAGCAGTGTCCTTGGAGCTTGGTGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGCTCATGAAGCAAAAATaGACAGGCTGGTCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLLMKQK*TGWSRS
Trigger: AGAGCGGGACCAGCCTGTCCATTTTTGCTTCATGAG...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616417.5
3UTR CAA 72 bp CAGGGTCTATGGTCAAGCAGCCCCATGGATCTGAAATaGTTGGAGCTGTTAAACCAAGCACAGACCAGTTTC +
Preference number: 4 (lower is better)
Translates to: QGLWSSSPMDLK*LELLNQAQTSF
Trigger: GAAACTGGTCTGTGCTTGGTTTAACAGCTCCAACAATTTCAGATCCATGGGGCTGCTTGACCATAGACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp TTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGAGTGGAAGCAGCTCTTaGGCAAGGAGAGATGTCCCT +
Preference number: 4 (lower is better)
Translates to: LVTHLSRTSCNPVVTKSMSGSSS*ARRDVP
Trigger: AGGGACATCTCTCCTTGCTCAAGAGCTGCTTCCACT...CATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR TCA 90 bp CAATCTACCTTCTCCATCAGGTCCCCCAAGGTTCTCCTACTTCACACACATTCCAAGAGGCACTCTCAGTaGTACCAACACTCGAATTCT +
Preference number: 4 (lower is better)
Translates to: QSTFSIRSPKVLLLHTHSKRHSQ*YQHSNS
Trigger: AGAATTCGAGTGTTGGTATCACTGAGAGTGCCTCTT...GGAATGTGTGTGAAGTAGGAGAACCTTGGGGGACCTGATGGAGAAGGTAGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR TCA 90 bp ACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGGGACGCACACATTTCTaGAGGTCTTTGGAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: TFSDTSFKNVLQPCGHKEGRTHF*RSLEGS
Trigger: ACTGCCCTCCAAAGACCTTCAGAAATGTGTGCGTCC...CTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp AAACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACGGCAATGCCTTCTGCTaGTTTGATGCCATGCCCTCC +
Preference number: 4 (lower is better)
Translates to: KQTFSDTSFKNVLQPCGHGNAFC*FDAMPS
Trigger: GGAGGGCATGGCATCAAATCAGCAGAAGGCATTGCC...GTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp ATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTTTCTGTGCAAGGAGGTaGTACCCTCAGAAAAGACAG +
Preference number: 4 (lower is better)
Translates to: IFQERPATLWSQRVCVQGFCARR*YPQKRQ
Trigger: CTGTCTTTTCTGAGGGTATCACCTCCTTGCACAGAA...ACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp ACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCACCTCTAGTTTGTCCTTaGAAGGCTGGAGATACTCCT +
Preference number: 4 (lower is better)
Translates to: THLSRTSCNPVVTKSMRAPLVCP*KAGDTP
Trigger: AGGAGTATCTCCAGCCTTTCAAGGACAAACTAGAGG...TGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACGTTTCCAAATTGTCTTaGAGTCACTGCAGAACTCAT +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHVSKLS*SHCRTH
Trigger: ATGAGTTCTGCAGTGACTTCAAGACAATTTGGAAAC...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACTTGCTGACTGATTCCTaGGCCATTTTCAATCTTTCT +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHLLTDS*AIFNLS
Trigger: AGAAAGATTGAAAATGGCTCAGGAATCAGTCAGCAA...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp TCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACTTGTTCTCCAGGATaGAGTTTATGGCTATTTGTC +
Preference number: 4 (lower is better)
Translates to: SRTSCNPVVTKSMRARSSTCSPG*SLWLFV
Trigger: GACAAATAGCCATAAACTTCATCCTGGAGAACAAGT...GGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp AAGCACACCCAAGGCTGTGCTTGCTCAGGTATTACATTTTCTCCTGGGAGTTGGATGGCTTCTGTGACTTaGTTTGATCCTGACTGCAGT +
Preference number: 4 (lower is better)
Translates to: KHTQGCACSGITFSPGSWMASVT*FDPDCS
Trigger: ACTGCAGTCAGGATCAAATCAAGTCACAGAAGCCAT...CCAACTCCCAGGAGAAAATGTAATACCTGAGCAAGCACAGCCTTGGGTGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp AACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAGTGCCTGAAGGAGGCTaGGAAGAGGTTTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: NKHLVTHLSRTSCNPVVTVPEGG*EEVCSF
Trigger: GAAGCTGCAAACCTCTTCTCAGCCTCCTTCAGGCAC...TGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp AGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTTCCCATTCACACACTaGCTTGGCGCAATTTGCTGT +
Preference number: 4 (lower is better)
Translates to: SDTSFKNVLQPCGHKEYAFPFTH*LGAICC
Trigger: ACAGCAAATTGCGCCAAGTCAGTGTGTGAATGGGAA...CGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp CATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGCCAGTACATTGGCACTaGTCAATACAAGATCAAGGG +
Preference number: 4 (lower is better)
Translates to: HLSRTSCNPVVTKSMRARPVHWH*SIQDQG
Trigger: CCCTTGATCTTGTATTGATCAGTGCCAATGTACTGG...CCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp AAGCACACCCAAGGCTGTGCTTGCTCAGGTATTACATTTTCTCCTGGGAGTTGGTGTATGAAAATCCTCTaGCTTCCCCCTTTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: KHTQGCACSGITFSPGSWCMKIL*LPPLED
Trigger: GTCTTCCAAAGGGGGAAGTCAGAGGATTTTCATACA...CCAACTCCCAGGAGAAAATGTAATACCTGAGCAAGCACAGCCTTGGGTGTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR TCA 90 bp AGACAGAGGATACAAATCAAAGGTACTATCTGGGGAACTCCCTCCCTCATGCCTTGTCTGACTCCTCCCTaGCTTGGTAGCAGTTATGAA +
Preference number: 4 (lower is better)
Translates to: RQRIQIKGTIWGTPSLMPCLTPP*LGSSYE
Trigger: TTCATAACTGCTACCAAGTCAGGGAGGAGTCAGACA...AGGCATGAGGGAGGGAGTTCCCCAGATAGTACCTTTGATTTGTATCCTCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR TCA 90 bp AGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGTCTGACTCCTCCCTaGCTTGGTAGCAGTTATGAA +
Preference number: 4 (lower is better)
Translates to: SDTSFKNVLQPCGHKEYACLTPP*LGSSYE
Trigger: TTCATAACTGCTACCAAGTCAGGGAGGAGTCAGACA...CGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp ACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGGAGGCTGATGATGTCTaGCTCCTCCCTGACTTGGTA +
Preference number: 4 (lower is better)
Translates to: TFSDTSFKNVLQPCGHKEEADDV*LLPDLV
Trigger: TACCAAGTCAGGGAGGAGTCAGACATCATCAGCCTC...CTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp TTCCCAAGTATGGTGAGCCAAGCTCCCTGTGATTCTTCTGGCACTAAAAGGGTTTCGTGGGAGTCTGCTTaGAAAATATGTCGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: FPSMVSQAPCDSSGTKRVSWESA*KICRLD
Trigger: ATCCAGGCGACATATTTTTCAAGCAGACTCCCACGA...AACCCTTTTAGTGCCAGAAGAATCACAGGGAGCTTGGCTCACCATACTTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR TCA 90 bp GACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCTCTCCCTCTCTGTTGTaGGTTTGTACAGCTCAGTTA +
Preference number: 4 (lower is better)
Translates to: DTSFKNVLQPCGHKEYACSPSLL*VCTAQL
Trigger: TAACTGAGCTGTACAAACTCACAACAGAGAGGGAGA...GCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp AAGCACACCCAAGGCTGTGCTTGCTCAGGTATTACATTTTCTCCTGGGAGTTGGTCTCCCTCTCTGTTGTaGGTTTGTACAGCTCAGTTA +
Preference number: 4 (lower is better)
Translates to: KHTQGCACSGITFSPGSWSPSLL*VCTAQL
Trigger: TAACTGAGCTGTACAAACTCACAACAGAGAGGGAGA...CCAACTCCCAGGAGAAAATGTAATACCTGAGCAAGCACAGCCTTGGGTGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR TCA 90 bp AAACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACCAAGCCCAGTGTCCTTaGAAGCCGTCTCAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: KQTFSDTSFKNVLQPCGHQAQCP*KPSQSS
Trigger: GGAGCTTTGAGACGGCTTTCAAGGACACTGGGCTTG...GTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp GACACTGCTTTGCAGGCTAGCACAACTAGAGTTCCTCAAGGTTTGGGGGAAGACTGCTTACAGTTCTTATaGCTGGTTCCTGAAAGTGCT +
Preference number: 4 (lower is better)
Translates to: DTALQASTTRVPQGLGEDCLQFL*LVPESA
Trigger: AGCACTTTCAGGAACCAGTCATAAGAACTGTAAGCA...GTCTTCCCCCAAACCTTGAGGAACTCTAGTTGTGCTAGCCTGCAAAGCAGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR GCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACTTCTGTCTCCACGCTTaGAATTTTCTCATCATTTCC +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHFCLHA*NFLIIS
Trigger: GGAAATGATGAGAAAATTGCAAGCGTGGAGACAGAA...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR GCA 90 bp TATGACAACACCAGCATGTCTGTGCAGATTCTTCTCCAGGAGGGCTTTAGAAGTTGCCAGCTTCCAGTTTaGTGCTCATCTCAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: YDNTSMSVQILLQEGFRSCQLPV*CSSQVE
Trigger: TTCCACCTGAGATGAGCAGCAAACTGGAAGCTGGCA...ACTTCTAAAGCCCTCCTGGAGAAGAATCTGCACAGACATGCTGGTGTTGTCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR GCA 90 bp GCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCAATTTCTTCTTTGTaGTCCCTCTTCAAGTGTAAA +
Preference number: 4 (lower is better)
Translates to: ATLWSQRVCVQGPPPPVPSISSL*SLFKCK
Trigger: TTTACACTTGAAGAGGGAGCACAAAGAAGAAATTGA...TGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCACTCCATTGGCTGGAGTaGTGCATGGATGTCTTTGTG +
Preference number: 4 (lower is better)
Translates to: LFSNPISLATQTGFICVALHWLE*CMDVFV
Trigger: CACAAAGACATCCATGCAGCACTCCAGCCAATGGAG...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp CGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAATTAGGATATGGTGCTaGTTTCATTACTGGATCTAT +
Preference number: 4 (lower is better)
Translates to: RPATLWSQRVCVQGPPPPIRIWC*FHYWIY
Trigger: ATAGATCCAGTAATGAAAGCAGCACCATATCCTAAT...TGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp GCCTCTAATAAGGTGTCAACAGCGGACAGGTGTGCAGAAATGACACAAAATGGGAAGGCGGTTAGCACCTaGATGAATATGGCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: ASNKVSTADRCAEMTQNGKAVST*MNMASV
Trigger: CACAGAAGCCATATTCATGCAGGTGCTAACCGCCTT...CCCATTTTGTGTCATTTCTGCACACCTGTCCGCTGTTGACACCTTATTAGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACGAGGCAGGCAAACCTTaGTTTGTAGAAATAGGTATT +
Preference number: 4 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHEAGKP*FVEIGI
Trigger: AATACCTATTTCTACAAAGCAAGGTTTGCCTGCCTC...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp GGCAGGATGTGCTTAAGCTGCCAAATGGCATCCCGATCACCTCCTCTCCAGGAAATTGTGAAACCAAAATaGAGTGCCTCTAATAAGGTG +
Preference number: 4 (lower is better)
Translates to: GRMCLSCQMASRSPPLQEIVKPK*SASNKV
Trigger: CACCTTATTAGAGGCACTGCATTTTGGTTTCACAAT...TTCCTGGAGAGGAGGTGATCGGGATGCCATTTGGCAGCTTAAGCACATCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp AGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTTTCACTGGGGTACCTaGTTTCCCAGTACATTGGCA +
Preference number: 4 (lower is better)
Translates to: SDTSFKNVLQPCGHKEYAFHWGT*FPSTLA
Trigger: TGCCAATGTACTGGGAAAGCAGGTACCCCAGTGAAA...CGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCGAGTGCCTTCCATTATaGCTACCTAATTATTCATGC +
Preference number: 4 (lower is better)
Translates to: VVTKSMRARSSTSSAIISECLPL*LPNYSC
Trigger: GCATGAATAATTAGGTAGGCATAATGGAAGGCACTC...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp AGACAGAGGATACAAATCAAAGGTACTATCTGGGGAACTCCCTCCCTCATGCCTGGAGGGTACAATGAGTaGCTTCCATTATGCCTACCT +
Preference number: 4 (lower is better)
Translates to: RQRIQIKGTIWGTPSLMPGGYNE*LPLCLP
Trigger: AGGTAGGCATAATGGAAGGCACTCATTGTACCCTCC...AGGCATGAGGGAGGGAGTTCCCCAGATAGTACCTTTGATTTGTATCCTCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR GCA 90 bp GAAAGACACCATCATCAACATAAGGATTCAAAAGGCAACTGTTGGGCAGTAGGAAAACTCAGCGTGGGCTaGTGGGCGAATGGCAATCGT +
Preference number: 4 (lower is better)
Translates to: ERHHHQHKDSKGNCWAVGKLSVG*WANGNR
Trigger: ACGATTGCCATTCGCCCAGCAGCCCACGCTGAGTTT...TCCTACTGCCCAACAGTTGCCTTTTGAATCCTTATGTTGATGATGGTGTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR GCA 90 bp GTGAGCCAAGCTCCCTGTGATTCTTCTGGCACTAAAAGGGTTTACTTTGAATCAAAACCCAACAGAAGGTaGATCGCTGGCCTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: VSQAPCDSSGTKRVYFESKPNRR*IAGLCD
Trigger: GTCACAGAGGCCAGCGATGCACCTTCTGTTGGGTTT...TGATTCAAAGTAAACCCTTTTAGTGCCAGAAGAATCACAGGGAGCTTGGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR GCA 90 bp ATCAGGAAGAACTATGCCTGGAGCATATGCTTCCATCACCACATCAGTGACTTCCCAAGGACACTGCTTTaGAGGCTAGCACAACTAGAG +
Preference number: 4 (lower is better)
Translates to: IRKNYAWSICFHHHISDFPRTLL*RLAQLE
Trigger: CTCTAGTTGTGCTAGCCTGCAAAGCAGTGTCCTTGG...GAAGTCACTGATGTGGTGATGGAAGCATATGCTCCAGGCATAGTTCTTCCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp CTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCCATCCTGCTGAGATGTaGGATTCACGTCTAAACTAT +
Preference number: 4 (lower is better)
Translates to: LSRTSCNPVVTKSMRARSHPAEM*DSRLNY
Trigger: ATAGTTTAGACGTGAATCCCACATCTCAGCAGGATG...GGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CCA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGGCTGCTCATCTCAGGTaGAATCCTTTGAGGATCTTC +
Preference number: 4 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLAAHLR*NPLRIF
Trigger: GAAGATCCTCAAAGGATTCCACCTGAGATGAGCAGC...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CCA 90 bp AAGCACACCCAAGGCTGTGCTTGCTCAGGTATTACATTTTCTCCTGGGAGTTGGCCAACACTCGAATTCTaGTTTGTTACTGCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: KHTQGCACSGITFSPGSWPTLEF*FVTAGR
Trigger: CCTACCTGCAGTAACAAACCAGAATTCGAGTGTTGG...CCAACTCCCAGGAGAAAATGTAATACCTGAGCAAGCACAGCCTTGGGTGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CCA 90 bp CTTCACACACATTCCCCCTTTCATTCATTCCACTGCATTCATCTTTCATCTTTCCTCCAGGGCTGTCTCTaGCGACTTTGGCTTGACCTC +
Preference number: 4 (lower is better)
Translates to: LHTHSPFHSFHCIHLSSFLQGCL*RLWLDL
Trigger: GAGGTCAAGCCAAAGTCGCCAGAGACAGCCCTGGAG...GAAAGATGAAAGATGAATGCAGTGGAATGAATGAAAGGGGGAATGTGTGTGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCATGTGTCTTTTGTCTTTaGGGGTGGCCAGACAGCTTG +
Preference number: 4 (lower is better)
Translates to: LFSNPISLATQTGFICVACVFCL*GWPDSL
Trigger: CAAGCTGTCTGGCCACCCCCAAAGACAAAAGACACA...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp ATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTGTCTCTCTGTCTGTCTaGACGCACACATTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: IFQERPATLWSQRVCVQGVSLSV*THTFLK
Trigger: CTTCAGAAATGTGTGCGTCCAGACAGACAGAGAGAC...ACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCAGCATGGATGTCTTTGTaGTCATTTGGGGGTGAGAGC +
Preference number: 4 (lower is better)
Translates to: LFSNPISLATQTGFICVAAWMSL*SFGGES
Trigger: GCTCTCACCCCCAAATGACCACAAAGACATCCATGC...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGGGCTGGAGTGCTGCATaGATGTCTTTGTGGTCATTT +
Preference number: 4 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLGWSAA*MSLWSF
Trigger: AAATGACCACAAAGACATCCATGCAGCACTCCAGCC...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp TTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGACTCACAGGTGGCATTaGAGGTGCGGGAGACAAAGA +
Preference number: 4 (lower is better)
Translates to: LVTHLSRTSCNPVVTKSMTHRWH*RCGRQR
Trigger: TCTTTGTCTCCCGCACCTCCAATGCCACCTGTGAGT...CATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTACTCACAGGTGGCATTaGAGGTGCGGGAGACAAAGA +
Preference number: 4 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSTHRWH*RCGRQR
Trigger: TCTTTGTCTCCCGCACCTCCAATGCCACCTGTGAGT...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTGCTTCATGGGACAACTaGGCTCGATGGCTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSASWDN*ARWLVF
Trigger: GAAAACCAGCCATCGAGCCCAGTTGTCCCATGAAGC...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp CATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGAATATAAAGGCTTCATaGGACAACTGGGCTCGATGG +
Preference number: 4 (lower is better)
Translates to: HLSRTSCNPVVTKSMRARNIKAS*DNWARW
Trigger: CCATCGAGCCCAGTTGTCCCATGAAGCCTTTATATT...CCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp AAGCACACCCAAGGCTGTGCTTGCTCAGGTATTACATTTTCTCCTGGGAGTTGGAATATAAAGGCTTCATaGGACAACTGGGCTCGATGG +
Preference number: 4 (lower is better)
Translates to: KHTQGCACSGITFSPGSWNIKAS*DNWARW
Trigger: CCATCGAGCCCAGTTGTCCCATGAAGCCTTTATATT...CCAACTCCCAGGAGAAAATGTAATACCTGAGCAAGCACAGCCTTGGGTGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp GTGATGCTGACATTAACAAGAGGCAGTCACAGCAGTGTGTCTCACATGGGCTCCACCAGCTCATCCTCTTaGGCTCTGTTTTCATATAAG +
Preference number: 4 (lower is better)
Translates to: VMLTLTRGSHSSVSHMGSTSSSS*ALFSYK
Trigger: CTTATATGAAAACAGAGCCCAAGAGGATGAGCTGGT...GGAGCCCATGTGAGACACACTGCTGTGACTGCCTCTTGTTAATGTCAGCATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp ACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGCGTCCTGCAACCCTGTaGTCACAAAGAGTATGCGTG +
Preference number: 4 (lower is better)
Translates to: TFSDTSFKNVLQPCGHKERPATL*SQRVCV
Trigger: CACGCATACTCTTTGTGACCACAGGGTTGCAGGACG...CTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp AACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACACAAGTCCAGGGGTTCTaGAAAGATGCTGGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: NKHLVTHLSRTSCNPVVTQVQGF*KDAGAR
Trigger: CCTTGCCCCAGCATCTTTCCAGAACCCCTGGACTTG...TGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp GGCAGGATGTGCTTAAGCTGCCAAATGGCATCCCGATCACCTCCTCTCCAGGAAATTCCTCAACCATACTaGCAATTTGTTTTGGCTAGA +
Preference number: 4 (lower is better)
Translates to: GRMCLSCQMASRSPPLQEIPQPY*QFVLAR
Trigger: TCTAGCCAAAACAAATTGCCAGTATGGTTGAGGAAT...TTCCTGGAGAGGAGGTGATCGGGATGCCATTTGGCAGCTTAAGCACATCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp CATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGGTCAATGTTACAGCCTaGTTCCTGGAAAAAGAGCCT +
Preference number: 4 (lower is better)
Translates to: HLSRTSCNPVVTKSMRARVNVTA*FLEKEP
Trigger: AGGCTCTTTTTCCAGGAACCAGGCTGTAACATTGAC...CCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp AGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGGAGCCCGGTTATGCCTaGATTCAATTGCTAATGGAG +
Preference number: 4 (lower is better)
Translates to: SDTSFKNVLQPCGHKEYAEPGYA*IQLLME
Trigger: CTCCATTAGCAATTGAATCCAGGCATAACCGGGCTC...CGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp CATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCCTGAATAGCCAGTaGTCTATGGGACTAACCTTT +
Preference number: 4 (lower is better)
Translates to: HLSRTSCNPVVTKSMRARSLNSQ*SMGLTF
Trigger: AAAGGTTAGTCCCATAGACCACTGGCTATTCAGGGA...CCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp ATCAGGAAGAACTATGCCTGGAGCATATGCTTCCATCACCACATCAGTGACTTCCTGAGCTCAGGAGATTaGTTAGCAGTCTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: IRKNYAWSICFHHHISDFLSSGD*LAVSPS
Trigger: AGAGGGAGAGACTGCTAACCAATCTCCTGAGCTCAG...GAAGTCACTGATGTGGTGATGGAAGCATATGCTCCAGGCATAGTTCTTCCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp AGACAGAGGATACAAATCAAAGGTACTATCTGGGGAACTCCCTCCCTCATGCCTGGCTTTTTGTTCCCGTaGGTGCTCCTCTTATTGAGA +
Preference number: 4 (lower is better)
Translates to: RQRIQIKGTIWGTPSLMPGFLFP*VLLLLR
Trigger: TCTCAATAAGAGGAGCACCCACGGGAACAAAAAGCC...AGGCATGAGGGAGGGAGTTCCCCAGATAGTACCTTTGATTTGTATCCTCTGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp ATCAGGAAGAACTATGCCTGGAGCATATGCTTCCATCACCACATCAGTGACTTCCACGCCCTTTTCTTTTaGTCCTCTTCTGTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: IRKNYAWSICFHHHISDFHALFF*SSSVEG
Trigger: CCCTTCCACAGAAGAGGACCAAAAGAAAAGGGCGTG...GAAGTCACTGATGTGGTGATGGAAGCATATGCTCCAGGCATAGTTCTTCCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp GTGAGCCAAGCTCCCTGTGATTCTTCTGGCACTAAAAGGGTTTACTTTGAATCACGGTGCTGGTGGGGATaGCTTCTTCTTATCACCTCT +
Preference number: 4 (lower is better)
Translates to: VSQAPCDSSGTKRVYFESRCWWG*LLLITS
Trigger: AGAGGTGATAAGAAGAAGCCATCCCCACCAGCACCG...TGATTCAAAGTAAACCCTTTTAGTGCCAGAAGAATCACAGGGAGCTTGGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp AAACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAGAGCTGCCGGTGCTaGTGGGGATGGCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: KQTFSDTSFKNVLQPCGHKSCRC*WGWLLL
Trigger: AAGAAGAAGCCATCCCCACCAGCACCGGCAGCTCTT...GTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp TTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATAAGAGCTGCCGGTGCTaGTGGGGATGGCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: FSDTSFKNVLQPCGHKEYKSCRC*WGWLLL
Trigger: AAGAAGAAGCCATCCCCACCAGCACCGGCAGCTCTT...ATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp GGGCATTTCCCAAGTATGGTGAGCCAAGCTCCCTGTGATTCTTCTGGCACTAAATACTCCACAAAGGCTTaGGAACATTCCACATCAGTC +
Preference number: 4 (lower is better)
Translates to: GHFPSMVSQAPCDSSGTKYSTKA*EHSTSV
Trigger: GACTGATGTGGAATGTTCCCAAGCCTTTGTGGAGTA...TTTAGTGCCAGAAGAATCACAGGGAGCTTGGCTCACCATACTTGGGAAATGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp CTACTGAACCACCCAACTTTGATCTGTTCATGTCTATCAATGAACAGGAATGGACCTCAGTTCCCAGCCTaGCATGTCACTATGGACCGG +
Preference number: 4 (lower is better)
Translates to: LLNHPTLICSCLSMNRNGPQFPA*HVTMDR
Trigger: CCGGTCCATAGTGACATGCCAGGCTGGGAACTGAGG...TCCATTCCTGTTCATTGATAGACATGAACAGATCAAAGTTGGGTGGTTCAGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp GAAATCATCTCAAGATTCAACTGCCAGTGTGTTCTCAATCACTGGAGTAATTTGGCTGGGCGCCCATGGTaGTACCATAACTGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: EIISRFNCQCVLNHWSNLAGRPW*YHNCAG
Trigger: CCCTGCACAGTTATGGTACCACCATGGGCGCCCAGC...CAAATTACTCCAGTGATTGAGAACACACTGGCAGTTGAATCTTGAGATGATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp CTTCACACACATTCCCCCTTTCATTCATTCCACTGCATTCATCTTTCATCTTTCCCTGCTGGGCGCCCATaGTGGTACCATAACTGTGCA +
Preference number: 4 (lower is better)
Translates to: LHTHSPFHSFHCIHLSSFPAGRP*WYHNCA
Trigger: TGCACAGTTATGGTACCACCATGGGCGCCCAGCAGG...GAAAGATGAAAGATGAATGCAGTGGAATGAATGAAAGGGGGAATGTGTGTGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR TCA 90 bp TTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGTCAGGTGGAATCCTTTaGGGATCTTCTGCACAGAGC +
Preference number: 4 (lower is better)
Translates to: LVTHLSRTSCNPVVTKSMSGGIL*GSSAQS
Trigger: GCTCTGTGCAGAAGATCCTCAAAGGATTCCACCTGA...CATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR TCA 90 bp TTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGGCACACGAAGCCCACTaGAAAAAGCTGGAAGTTGGA +
Preference number: 4 (lower is better)
Translates to: LVTHLSRTSCNPVVTKSMAHEAH*KKLEVG
Trigger: TCCAACTTCCAGCTTTTTTCAGTGGGCTTCGTGTGC...CATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR TCA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTCAGGCTGCGTCAATTTaGGCAAAGCTAAGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSQAASI*AKLSPH
Trigger: ATGGGGACTTAGCTTTGCTCAAATTGACGCAGCCTG...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR TCA 90 bp AAACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACTGCTCGCCCCGGATATaGAATGCCCGAAGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: KQTFSDTSFKNVLQPCGHCSPRI*NARSSN
Trigger: GTTTGAACTTCGGGCATTTCATATCCGGGGCGAGCA...GTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp AAACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACGGACGCACACATTTCTaGAGGTCTTTGGAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: KQTFSDTSFKNVLQPCGHGRTHF*RSLEGS
Trigger: ACTGCCCTCCAAAGACCTTCAGAAATGTGTGCGTCC...GTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp TGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCGTTTCCAAATTGTCTTaGAGTCACTGCAGAACTCAT +
Preference number: 4 (lower is better)
Translates to: CGHKEYACKVLHLQCHHFVSKLS*SHCRTH
Trigger: ATGAGTTCTGCAGTGACTTCAAGACAATTTGGAAAC...GAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp TTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATCATGAGCAGGTGCTGTaGGTTGCATTTGCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: FSDTSFKNVLQPCGHKEYHEQVL*VAFALL
Trigger: CAGGAGAGCAAATGCAACTCACAGCACCTGCTCATG...ATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCATTCCCATTCACACACTaGCTTGGCGCAATTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LFSNPISLATQTGFICVAFPFTH*LGAICC
Trigger: ACAGCAAATTGCGCCAAGTCAGTGTGTGAATGGGAA...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCTTGCAGATTTCTTTATaGGGTCAAAGTAGCAGACAT +
Preference number: 4 (lower is better)
Translates to: VVTKSMRARSSTSSAIISLQISL*GQSSRH
Trigger: ATGTCTGCTACTTTGACCTCATAAAGAAATCTGCAA...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp CATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGAGAGACAAGTTAGCATaGAGCGAGGAAAAAGGAGAT +
Preference number: 4 (lower is better)
Translates to: HLSRTSCNPVVTKSMRARRDKLA*SEEKGD
Trigger: ATCTCCTTTTTCCTCGCTTCATGCTAACTTGTCTCT...CCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp TGTTTTCAATGGAAATGGAAGCCTTCCAAATATTATGCAGAACACAATCTCAGTCCCTGTCCAAACGGCTaGGGAACGGAGCACAGGGTG +
Preference number: 4 (lower is better)
Translates to: CFQWKWKPSKYYAEHNLSPCPNG*GTEHRV
Trigger: CACCCTGTGCTCCGTTCCTCAGCCGTTTGGACAGGG...ACTGAGATTGTGTTCTGCATAATATTTGGAAGGCTTCCATTTCCATTGAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp ACTCAAGAGCATACTAAAGATTGGGCATTTCCCAAGTATGGTGAGCCAAGCTCCATGGTAAATGTCATCTaGCCAATACTCGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: TQEHTKDWAFPKYGEPSSMVNVI*PILGRL
Trigger: CAGCCTCCCGAGTATTGGTCAGATGACATTTACCAT...GGAGCTTGGCTCACCATACTTGGGAAATGCCCAATCTTTAGTATGCTCTTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR TCA 90 bp ACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTGCAGAGAAAGCAGCTaGCAGTCATCTCCAGCAATG +
Preference number: 4 (lower is better)
Translates to: TFSDTSFKNVLQPCGHKECRESS*QSSPAM
Trigger: CATTGCTGGAGATGACTGTCAGCTGCTTTCTCTGCA...CTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp ATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTAATTGGAGGGTACAATaGGTGCCTTCCATTATGCCT +
Preference number: 4 (lower is better)
Translates to: IFQERPATLWSQRVCVQGNWRVQ*VPSIMP
Trigger: AGGCATAATGGAAGGCACTCATTGTACCCTCCAATT...ACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp GCTGGCAACTCTCTGAGCCCTCTTCTGGGTTTAGGTGGGAAGAGAAATGAAGTGATGCTACATCCTGCATaGATGGTAATGTCAGCTTTA +
Preference number: 4 (lower is better)
Translates to: AGNSLSPLLGLGGKRNEVMLHPA*MVMSAL
Trigger: TAAAGCTGACATTACCATTCATGCAGGATGTAGCAT...CACTTCATTTCTCTTCCCACCTAAACCCAGAAGAGGGCTCAGAGAGTTGCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR GCA 90 bp CTACTGAACCACCCAACTTTGATCTGTTCATGTCTATCAATGAACAGGAATGGAACTTTGGGCCATTGGTaGTGCTTCCCTCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LLNHPTLICSCLSMNRNGTLGHW*CFPPLA
Trigger: AGCCAGAGGAGGGAAGCAGCACCAATGGCCCAAAGT...TCCATTCCTGTTCATTGATAGACATGAACAGATCAAAGTTGGGTGGTTCAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR GCA 90 bp GAAATCATCTCAAGATTCAACTGCCAGTGTGTTCTCAATCACTGGAGTAATTTGAGCAGCAGAGAGAGCTaGTCCAGGAGAGTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: EIISRFNCQCVLNHWSNLSSRES*SRRVGV
Trigger: CACTCCCACTCTCCTGGAGCAGCTCTCTCTGCTGCT...CAAATTACTCCAGTGATTGAGAACACACTGGCAGTTGAATCTTGAGATGATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR GCA 90 bp CTTCACACACATTCCCCCTTTCATTCATTCCACTGCATTCATCTTTCATCTTTCGGGCGACTCAGGGTCTaGTCCCTTCGGTTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: LHTHSPFHSFHCIHLSSFGRLRV*SLRFSF
Trigger: AAAACTGAACCGAAGGGAGCAGACCCTGAGTCGCCC...GAAAGATGAAAGATGAATGCAGTGGAATGAATGAAAGGGGGAATGTGTGTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR GCA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCAGTTCAAACTGTGCCTaGAGGTTTTCAATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: VVTKSMRARSSTSSAIISSSNCA*RFSISS
Trigger: AGAAGAAATTGAAAACCTGCAGGCACAGTTTGAACT...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp ACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGGCCCCGGATATGAAATaGCCGAAGTTCAAACTGTGC +
Preference number: 4 (lower is better)
Translates to: TFSDTSFKNVLQPCGHKEAPDMK*PKFKLC
Trigger: GCACAGTTTGAACTTCGGGCATTTCATATCCGGGGC...CTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp AAACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAGGTGGCATTGGAGGTaGGGGAGACAAAGATCCAAG +
Preference number: 4 (lower is better)
Translates to: KQTFSDTSFKNVLQPCGHRWHWR*GRQRSK
Trigger: CTTGGATCTTTGTCTCCCGCACCTCCAATGCCACCT...GTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp TCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCAACTCATGTAAAAATTaGTCAGGTTTATCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SRTSCNPVVTKSMRARSSNSCKN*SGLSSS
Trigger: GCTGCTGGATAAACCTGAGCAATTTTTACATGAGTT...GGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCATTCACGCTCTTCACGTaGAGCAAGTCCTTAGAAGCT +
Preference number: 4 (lower is better)
Translates to: LFSNPISLATQTGFICVAFTLFT*SKSLEA
Trigger: AGCTTCTAAGGACTTGCTGCACGTGAAGAGCGTGAA...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp AACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACACCTTTGGGGACTCCTTaGACACCACCACCATCTGTT +
Preference number: 4 (lower is better)
Translates to: NKHLVTHLSRTSCNPVVTPLGTP*TPPPSV
Trigger: AACAGATGGTGGTGGTGTGCAAGGAGTCCCCAAAGG...TGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTGTCCTCCACCTCCAGTaGCATCATTTCCATGTGTCT +
Preference number: 4 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSVLHLQ*HHFHVS
Trigger: AGACACATGGAAATGATGGCACTGGAGGTGGAGGAC...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp ACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTGGTCACAAAGAGTATaGGTGCAAGGTCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: TFSDTSFKNVLQPCGHKEWSQRV*VQGPPP
Trigger: AGGTGGAGGACCTTGCACGCATACTCTTTGTGACCA...CTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp GACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCGATGCTGCAGGATTTTaGTGCAACAGGATCAAAACT +
Preference number: 4 (lower is better)
Translates to: DTSFKNVLQPCGHKEYACDAAGF*CNRIKT
Trigger: AGTTTTGATCCTGTTGCAGCAAAATCCTGCAGCATC...GCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp GCCTCTAATAAGGTGTCAACAGCGGACAGGTGTGCAGAAATGACACAAAATGGGTGGAGAGAAAGATGCTaGAGGATTTTGCTGCAACAG +
Preference number: 4 (lower is better)
Translates to: ASNKVSTADRCAEMTQNGWRERC*RILLQQ
Trigger: CTGTTGCAGCAAAATCCTGCAGCATCTTTCTCTCCA...CCCATTTTGTGTCATTTCTGCACACCTGTCCGCTGTTGACACCTTATTAGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp CATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGCTGATGTCAACTCCTTaGATGGTAACTTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: HLSRTSCNPVVTKSMRARLMSTP*MVTCSP
Trigger: TGGAGAACAAGTTACCATGCAAGGAGTTGACATCAG...CCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCAGCACACCCAAGGCTGTaGTTGCTCAGGTATTACATT +
Preference number: 4 (lower is better)
Translates to: LFSNPISLATQTGFICVAAHPRL*LLRYYI
Trigger: AATGTAATACCTGAGCAAGCACAGCCTTGGGTGTGC...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp GACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCGTATCAACACAACATTaGCCATTCATGAACGGTCCA +
Preference number: 4 (lower is better)
Translates to: DTSFKNVLQPCGHKEYACVSTQH*PFMNGP
Trigger: TGGACCGTTCATGAATGGGCAATGTTGTGTTGATAC...GCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGAAGTTCAGATCCTCCTaGTACACTGAACACAAGCTC +
Preference number: 4 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLKFRSS*YTEHKL
Trigger: GAGCTTGTGTTCAGTGTAGCAGGAGGATCTGAACTT...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp TTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATCCTGCTGGCAGGATGTaGTTAAGCTGCCAAATGGCA +
Preference number: 4 (lower is better)
Translates to: FSDTSFKNVLQPCGHKEYPAGRM*LSCQMA
Trigger: TGCCATTTGGCAGCTTAAGCACATCCTGCCAGCAGG...ATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp TTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGGAGGGGAGGGGAGACTaGATGCCATCTGATATTCAA +
Preference number: 4 (lower is better)
Translates to: LVTHLSRTSCNPVVTKSMEGRGD*MPSDIQ
Trigger: TTGAATATCAGATGGCATGCAGTCTCCCCTCCCCTC...CATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp AGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGAAGAGCCTGCAAGCGTaGATTGCTAATTCCCATTCA +
Preference number: 4 (lower is better)
Translates to: SDTSFKNVLQPCGHKEYAKSLQA*IANSHS
Trigger: TGAATGGGAATTAGCAATGCACGCTTGCAGGCTCTT...CGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp GGGCATTTCCCAAGTATGGTGAGCCAAGCTCCCTGTGATTCTTCTGGCACTAAACTACCTAATTATTCATaGCTTGGAGATGCCGGTTTG +
Preference number: 4 (lower is better)
Translates to: GHFPSMVSQAPCDSSGTKLPNYS*LGDAGL
Trigger: CAAACCGGCATCTCCAAGGCATGAATAATTAGGTAG...TTTAGTGCCAGAAGAATCACAGGGAGCTTGGCTCACCATACTTGGGAAATGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR GCA 90 bp GGGCATTTCCCAAGTATGGTGAGCCAAGCTCCCTGTGATTCTTCTGGCACTAAATCTTTCGTGGGAGTCTaGTTGAAAAATATGTCGCCT +
Preference number: 4 (lower is better)
Translates to: GHFPSMVSQAPCDSSGTKSFVGV*LKNMSP
Trigger: AGGCGACATATTTTTCAAGCAGACTCCCACGAAAGA...TTTAGTGCCAGAAGAATCACAGGGAGCTTGGCTCACCATACTTGGGAAATGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR GCA 90 bp AGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGAACAGATCTTGTCCTTaGCCATCAGAGGAGCTGATT +
Preference number: 4 (lower is better)
Translates to: SDTSFKNVLQPCGHKEYANRSCP*PSEELI
Trigger: AATCAGCTCCTCTGATGGGCAAGGACAAGATCTGTT...CGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp AAGCACACCCAAGGCTGTGCTTGCTCAGGTATTACATTTTCTCCTGGGAGTTGGTTGTGTGTGCTGGACTaGGAGGCTGAATTATTAAAC +
Preference number: 4 (lower is better)
Translates to: KHTQGCACSGITFSPGSWLCVLD*EAELLN
Trigger: GTTTAATAATTCAGCCTCGCAGTCCAGCACACACAA...CCAACTCCCAGGAGAAAATGTAATACCTGAGCAAGCACAGCCTTGGGTGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR GCA 90 bp TTCACGCTCTTCACGTGCAGCAAGTCCTGTGATGGCAAACACCAGTTATTACGGGAGCTGAACTCCAAATaGACCCATGTTCATTCAGTA +
Preference number: 4 (lower is better)
Translates to: FTLFTCSKSCDGKHQLLRELNSK*THVHSV
Trigger: TACTGAATGAACATGGGTGCATTTGGAGTTCAGCTC...CCGTAATAACTGGTGTTTGCCATCACAGGACTTGCTGCACGTGAAGAGCGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558711.1
CDS-3UTR GCA 90 bp CTTCACACACATTCCCCCTTTCATTCATTCCACTGCATTCATCTTTCATCTTTCCCTCCTTCCGGTTTGTaGGATGATGTGTTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LHTHSPFHSFHCIHLSSFPPSGL*DDVFQG
Trigger: GCCCTGGAACACATCATCGCACAAACCGGAAGGAGG...GAAAGATGAAAGATGAATGCAGTGGAATGAATGAAAGGGGGAATGTGTGTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp AAGCACACCCAAGGCTGTGCTTGCTCAGGTATTACATTTTCTCCTGGGAGTTGGAATACTCAAATTCACTaGGGTCCCGAATGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: KHTQGCACSGITFSPGSWNTQIH*GPECQV
Trigger: AACCTGACATTCGGGACCCCAGTGAATTTGAGTATT...CCAACTCCCAGGAGAAAATGTAATACCTGAGCAAGCACAGCCTTGGGTGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp CGCTCTTCACGTGCAGCAAGTCCTGTGATGGCAAACACCAGTTATTACGGAGCTCTGAAGATTATGCACTaGGCACGTTCAGCAAAATTA +
Preference number: 4 (lower is better)
Translates to: RSSRAASPVMANTSYYGALKIMH*ARSAKL
Trigger: TAATTTTGCTGAACGTGCCCAGTGCATAATCTTCAG...AGCTCCGTAATAACTGGTGTTTGCCATCACAGGACTTGCTGCACGTGAAGAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558711.1
CDS-3UTR CCA 90 bp GACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCTCTTCAAACTTGACTTaGGAGGCCAGAAAGAAATCC +
Preference number: 4 (lower is better)
Translates to: DTSFKNVLQPCGHKEYACSSNLT*EARKKS
Trigger: GGATTTCTTTCTGGCCTCCCAAGTCAAGTTTGAAGA...GCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCATTGTCCTTGAAAGGCTaGAGATACTCCTTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: LFSNPISLATQTGFICVALSLKG*RYSFGD
Trigger: GTCCCCAAAGGAGTATCTCCAGCCTTTCAAGGACAA...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATTTGCTCTCCTGTCTaGAAACTGCCTCCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSICSPV*KLPPGD
Trigger: ATCCCCAGGAGGCAGTTTCCAGACAGGAGAGCAAAT...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp AAGCACACCCAAGGCTGTGCTTGCTCAGGTATTACATTTTCTCCTGGGAGTTGGCAGAGAGGTCAAAGGTaGTTTCCTTATGTGACTCAA +
Preference number: 4 (lower is better)
Translates to: KHTQGCACSGITFSPGSWQRGQR*FPYVTQ
Trigger: TTGAGTCACATAAGGAAACCACCTTTGACCTCTCTG...CCAACTCCCAGGAGAAAATGTAATACCTGAGCAAGCACAGCCTTGGGTGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp GTTCCCTTAAATAGTTTTCCATTGTTCCTGCGGCTTAATGAGGGACTTCTTAAAAGATGCTCAGGCACCTaGCAAGTCCAGGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: VPLNSFPLFLRLNEGLLKRCSGT*QVQGFW
Trigger: CCAGAACCCCTGGACTTGCCAGGTGCCTGAGCATCT...TTTAAGAAGTCCCTCATTAAGCCGCAGGAACAATGGAAAACTATTTAAGGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp CATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGATTATTCTTCAGCACTaGTTCCTGAAGGGTTACGTG +
Preference number: 4 (lower is better)
Translates to: HLSRTSCNPVVTKSMRARIILQH*FLKGYV
Trigger: CACGTAACCCTTCAGGAACCAGTGCTGAAGAATAAT...CCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp ATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTGCACACCTCCTAACCTaGTTTTTGATACTTCATGGG +
Preference number: 4 (lower is better)
Translates to: IFQERPATLWSQRVCVQGAHLLT*FLILHG
Trigger: CCCATGAAGTATCAAAAACCAGGTTAGGAGGTGTGC...ACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCATCAAAAGGCAACTGTTaGGCAGTAGGACCATCACCT +
Preference number: 4 (lower is better)
Translates to: LFSNPISLATQTGFICVASKGNC*AVGPSP
Trigger: AGGTGATGGTCCTACTGCCCAACAGTTGCCTTTTGA...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp GGCAGGATGTGCTTAAGCTGCCAAATGGCATCCCGATCACCTCCTCTCCAGGAATCTTTGTTGTTTTTGTaGATGGAGATGAGTACTACA +
Preference number: 4 (lower is better)
Translates to: GRMCLSCQMASRSPPLQESLLFL*MEMSTT
Trigger: TGTAGTACTCATCTCCATCCACAAAAACAACAAAGA...TTCCTGGAGAGGAGGTGATCGGGATGCCATTTGGCAGCTTAAGCACATCCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCAGAGCCCGGTTATGCCTaGATTCAATTGCTAATGGAG +
Preference number: 4 (lower is better)
Translates to: LFSNPISLATQTGFICVAEPGYA*IQLLME
Trigger: CTCCATTAGCAATTGAATCCAGGCATAACCGGGCTC...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp CTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCAACAAAGCATTGATCTaGAAGTTCAGTAGATTGCCC +
Preference number: 4 (lower is better)
Translates to: LSRTSCNPVVTKSMRARSNKALI*KFSRLP
Trigger: GGGCAATCTACTGAACTTCCAGATCAATGCTTTGTT...GGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp CAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATATTAAGATAATGCATTaGCAGCTCACACTATACATG +
Preference number: 4 (lower is better)
Translates to: QPCGHKEYACKVLHLQCHIKIMH*QLTLYM
Trigger: CATGTATAGTGTGAGCTGCCAATGCATTATCTTAAT...ATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp CCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTTCCCTCTCACTCATaGATTTGTTTTCAATGGAAA +
Preference number: 4 (lower is better)
Translates to: PCGHKEYACKVLHLQCHHFPSHS*ICFQWK
Trigger: TTTCCATTGAAAACAAATCCATGAGTGAGAGGGAAA...ATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCAAGTAAACAGGGTCTATaGTCAAGCAGCCCCATGGAT +
Preference number: 4 (lower is better)
Translates to: LFSNPISLATQTGFICVASKQGL*SSSPMD
Trigger: ATCCATGGGGCTGCTTGACCATAGACCCTGTTTACT...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTCACGCCCTTTTCTTTTaGTCCTCTTCTGTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSHALFF*SSSVEG
Trigger: CCCTTCCACAGAAGAGGACCAAAAGAAAAGGGCGTG...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTACAGGTCCTGAACTTTaGCCACCACTTTGGAGACAG +
Preference number: 4 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSTGPEL*PPLWRQ
Trigger: CTGTCTCCAAAGTGGTGGCCAAAGTTCAGGACCTGT...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp AGAATTGATCAAGAGATTCTCAGTTCTCAATATCAGGAAGAACTATGCCTGGAGGGGCTGCTGGGCGAATaGCAATCGTCTCCTTACCCT +
Preference number: 4 (lower is better)
Translates to: RIDQEILSSQYQEELCLEGLLGE*QSSPYP
Trigger: AGGGTAAGGAGACGATTGCCATTCGCCCAGCAGCCC...CTCCAGGCATAGTTCTTCCTGATATTGAGAACTGAGAATCTCTTGATCAATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp GTGAGCCAAGCTCCCTGTGATTCTTCTGGCACTAAAAGGGTTTACTTTGAATCACTTGTTTCTCGTTTCTaGGCGAGTGTGAGGGACACT +
Preference number: 4 (lower is better)
Translates to: VSQAPCDSSGTKRVYFESLVSRF*ASVRDT
Trigger: AGTGTCCCTCACACTCGCCCAGAAACGAGAAACAAG...TGATTCAAAGTAAACCCTTTTAGTGCCAGAAGAATCACAGGGAGCTTGGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp AAACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACCGGTGCTGGTGGGGATaGCTTCTTCTTATCACCTCT +
Preference number: 4 (lower is better)
Translates to: KQTFSDTSFKNVLQPCGHRCWWG*LLLITS
Trigger: AGAGGTGATAAGAAGAAGCCATCCCCACCAGCACCG...GTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp GCTGGCAACTCTCTGAGCCCTCTTCTGGGTTTAGGTGGGAAGAGAAATGAAGTGGAGCATACTAAAGATTaGGCATTTCCCAAGTATGGT +
Preference number: 4 (lower is better)
Translates to: AGNSLSPLLGLGGKRNEVEHTKD*AFPKYG
Trigger: ACCATACTTGGGAAATGCCCAATCTTTAGTATGCTC...CACTTCATTTCTCTTCCCACCTAAACCCAGAAGAGGGCTCAGAGAGTTGCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp CAATCTACCTTCTCCATCAGGTCCCCCAAGGTTCTCCTACTTCACACACATTCCACTGTGAAAAATCTGTaGAGTCTATGCCCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: QSTFSIRSPKVLLLHTHSTVKNL*SLCPEA
Trigger: TGCTTCTGGGCATAGACTCCACAGATTTTTCACAGT...GGAATGTGTGTGAAGTAGGAGAACCTTGGGGGACCTGATGGAGAAGGTAGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR CAA 72 bp GATCAAGGGCACTCACATTTGCCTAATACAGATGCCTaGAATTTCCACGGAAAAGCTGTCCACGATACGACC +
Preference number: 4 (lower is better)
Translates to: DQGHSHLPNTDA*NFHGKAVHDTT
Trigger: GGTCGTATCGTGGACAGCTTTTCCGTGGAAATTCAAGGCATCTGTATTAGGCAAATGTGAGTGCCCTTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR CAA 72 bp GGTCTATGGTCAAGCAGCCCCATGGATCTGAAATTGTaGGAGCTGTTAAACCAAGCACAGACCAGTTTCACT +
Preference number: 4 (lower is better)
Translates to: GLWSSSPMDLKL*ELLNQAQTSFT
Trigger: AGTGAAACTGGTCTGTGCTTGGTTTAACAGCTCCAACAATTTCAGATCCATGGGGCTGCTTGACCATAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR CAA 72 bp ACCCTCCCACAGGATGATAATAACAGAAGCTTGTCTTaGTGCCCTTGTACTAAACTCCCGTGTCGTGTGGTA +
Preference number: 4 (lower is better)
Translates to: TLPQDDNNRSLS*CPCTKLPCRVV
Trigger: TACCACACGACACGGGAGTTTAGTACAAGGGCACAAAGACAAGCTTCTGTTATTATCATCCTGTGGGAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR TCA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCATCCCACGAACACAAATaGCATCGTCTTTTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: LFSNPISLATQTGFICVASHEHK*HRLLSL
Trigger: AAGGGACAAAAGACGATGTCATTTGTGTTCGTGGGA...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR TCA 90 bp ATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTAAGATTCCCACAGTTTaGGATCGTTTTCCATCCAAC +
Preference number: 4 (lower is better)
Translates to: IFQERPATLWSQRVCVQGKIPTV*DRFPSN
Trigger: GTTGGATGGAAAACGATCTCAAACTGTGGGAATCTT...ACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp GCAAACACCAGTTATTACGGAGCTGAACTCCAAATGCACCCATGTTCATTCAGTTTCTGTGCAAGGAGGTaGTACCCTCAGAAAAGACAG +
Preference number: 4 (lower is better)
Translates to: ANTSYYGAELQMHPCSFSFCARR*YPQKRQ
Trigger: CTGTCTTTTCTGAGGGTATCACCTCCTTGCACAGAA...ACTGAATGAACATGGGTGCATTTGGAGTTCAGCTCCGTAATAACTGGTGTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558711.1
CDS-3UTR TCA 90 bp CGCTCTTCACGTGCAGCAAGTCCTGTGATGGCAAACACCAGTTATTACGGAGCTTTCCAAAAGCCAAGATaGGAGCTAAAATATCCTTCA +
Preference number: 4 (lower is better)
Translates to: RSSRAASPVMANTSYYGAFQKPR*ELKYPS
Trigger: TGAAGGATATTTTAGCTCTCATCTTGGCTTTTGGAA...AGCTCCGTAATAACTGGTGTTTGCCATCACAGGACTTGCTGCACGTGAAGAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558711.1
CDS-3UTR TCA 90 bp CTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTTCCAAAAGCCAAGATaGGAGCTAAAATATCCTTCA +
Preference number: 4 (lower is better)
Translates to: LSRTSCNPVVTKSMRARSFQKPR*ELKYPS
Trigger: TGAAGGATATTTTAGCTCTCATCTTGGCTTTTGGAA...GGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp ACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGCCTCTAGTTTGTCCTTaGAAGGCTGGAGATACTCCT +
Preference number: 4 (lower is better)
Translates to: TFSDTSFKNVLQPCGHKEPLVCP*KAGDTP
Trigger: AGGAGTATCTCCAGCCTTTCAAGGACAAACTAGAGG...CTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp CATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTTGCTGACTGATTCCTaGGCCATTTTCAATCTTTCT +
Preference number: 4 (lower is better)
Translates to: HLSRTSCNPVVTKSMRARLLTDS*AIFNLS
Trigger: AGAAAGATTGAAAATGGCTCAGGAATCAGTCAGCAA...CCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp ATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTAGAAAGAGCTGCCTGTaGACAATATTCCACTTGGAA +
Preference number: 4 (lower is better)
Translates to: IFQERPATLWSQRVCVQGRKSCL*TIFHLE
Trigger: TTCCAAGTGGAATATTGTTCACAGGCAGCTCTTTCT...ACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp GTTCCCTTAAATAGTTTTCCATTGTTCCTGCGGCTTAATGAGGGACTTCTTAAAGTGCCTGAAGGAGGCTaGGAAGAGGTTTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: VPLNSFPLFLRLNEGLLKVPEGG*EEVCSF
Trigger: GAAGCTGCAAACCTCTTCTCAGCCTCCTTCAGGCAC...TTTAAGAAGTCCCTCATTAAGCCGCAGGAACAATGGAAAACTATTTAAGGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGGAAAAACCGTACCAATaGCTTATCTTACTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLEKPYQ*LILLEV
Trigger: CACCTCCAGTAAGATAAGTCATTGGTACGGTTTTTC...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp GCCTCTAATAAGGTGTCAACAGCGGACAGGTGTGCAGAAATGACACAAAATGGGTGCTGTTGTATGCAATaGTCTGCATCAATGACACTG +
Preference number: 4 (lower is better)
Translates to: ASNKVSTADRCAEMTQNGCCCMQ*SASMTL
Trigger: CAGTGTCATTGATGCAGATCATTGCATACAACAGCA...CCCATTTTGTGTCATTTCTGCACACCTGTCCGCTGTTGACACCTTATTAGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp TTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGACAGGTGTGCAGAAATaGCACAAAATGGGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: LVTHLSRTSCNPVVTKSMTGVQK*HKMGFP
Trigger: TGGGAAGCCCATTTTGTGTCATTTCTGCACACCTGT...CATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTGTTCACATGAGCTCTTaGCTGAAGGACACGATCCTA +
Preference number: 4 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSVHMSS*LKDTIL
Trigger: TAGGATCGTGTCCTTCAGTCAAGAGCTCATGTGAAC...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp AAACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACCAATCTCAGTGGCGCTaGGCTACCTTCTTTATGCCT +
Preference number: 4 (lower is better)
Translates to: KQTFSDTSFKNVLQPCGHQSQWR*ATFFMP
Trigger: AGGCATAAAGAAGGTAGCTCAGCGCCACTGAGATTG...GTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp AAGCACACCCAAGGCTGTGCTTGCTCAGGTATTACATTTTCTCCTGGGAGTTGGCCACAGAAAGTTACTTaGGATTCAAAAATCTGGCGT +
Preference number: 4 (lower is better)
Translates to: KHTQGCACSGITFSPGSWPQKVT*DSKIWR
Trigger: ACGCCAGATTTTTGAATCTCAAGTAACTTTCTGTGG...CCAACTCCCAGGAGAAAATGTAATACCTGAGCAAGCACAGCCTTGGGTGTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp TTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATAGTCATCTCCAGCAATaGGACTGCCTAGATCAGCCT +
Preference number: 4 (lower is better)
Translates to: FSDTSFKNVLQPCGHKEYSHLQQ*DCLDQP
Trigger: AGGCTGATCTAGGCAGTCTCATTGCTGGAGATGACT...ATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR TCA 90 bp ATCAGGAAGAACTATGCCTGGAGCATATGCTTCCATCACCACATCAGTGACTTCTGTATGAAAATCCTCTaGCTTCCCCCTTTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: IRKNYAWSICFHHHISDFCMKIL*LPPLED
Trigger: GTCTTCCAAAGGGGGAAGTCAGAGGATTTTCATACA...GAAGTCACTGATGTGGTGATGGAAGCATATGCTCCAGGCATAGTTCTTCCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR TCA 90 bp GTGAGCCAAGCTCCCTGTGATTCTTCTGGCACTAAAAGGGTTTACTTTGAATCATACAGTGCCCTTGTATaGAAATCCTCTGACTTCCCC +
Preference number: 4 (lower is better)
Translates to: VSQAPCDSSGTKRVYFESYSALV*KSSDFP
Trigger: GGGGAAGTCAGAGGATTTTCATACAAGGGCACTGTA...TGATTCAAAGTAAACCCTTTTAGTGCCAGAAGAATCACAGGGAGCTTGGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR TCA 90 bp TTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGTGTCTGACTCCTCCCTaGCTTGGTAGCAGTTATGAA +
Preference number: 4 (lower is better)
Translates to: LVTHLSRTSCNPVVTKSMCLTPP*LGSSYE
Trigger: TTCATAACTGCTACCAAGTCAGGGAGGAGTCAGACA...CATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp TTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGTCGTGGGAGTCTGCTTaGAAAATATGTCGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: LVTHLSRTSCNPVVTKSMSWESA*KICRLD
Trigger: ATCCAGGCGACATATTTTTCAAGCAGACTCCCACGA...CATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTTTCTCAGGGTCCTGGTaGCTTTCAGACAAACCTGTT +
Preference number: 4 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSFSGSW*LSDKPV
Trigger: AACAGGTTTGTCTGAAAGTCACCAGGACCCTGAGAA...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp AAACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACATCACCTCTGGGTTGTaGGGAGTCAGGACCTACTTT +
Preference number: 4 (lower is better)
Translates to: KQTFSDTSFKNVLQPCGHITSGL*GVRTYF
Trigger: AAAGTAGGTCCTGACTCCTCACAACCCAGAGGTGAT...GTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp CTTTGTGCCCTTGTACTAAACTCCCGTGTCGTGTGGTATGACAACACCAGCATGGTTCTGACACATCACTaGCATCCAGAGAATTATCAA +
Preference number: 4 (lower is better)
Translates to: LCALVLNSRVVWYDNTSMVLTHH*HPENYQ
Trigger: TTGATAATTCTCTGGATGGCAGTGATGTGTCAGAAC...CATGCTGGTGTTGTCATACCACACGACACGGGAGTTTAGTACAAGGGCACAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR GCA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCAAAGGAGAGATGTCCCTaGTTCTTTTCTCTGACTTCC +
Preference number: 4 (lower is better)
Translates to: LFSNPISLATQTGFICVAKERCP*FFSLTS
Trigger: GGAAGTCAGAGAAAAGAAGCAGGGACATCTCTCCTT...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR GCA 90 bp TATGACAACACCAGCATGTCTGTGCAGATTCTTCTCCAGGAGGGCTTTAGAAGTAAGGAGAGATGTCCCTaGTTCTTTTCTCTGACTTCC +
Preference number: 4 (lower is better)
Translates to: YDNTSMSVQILLQEGFRSKERCP*FFSLTS
Trigger: GGAAGTCAGAGAAAAGAAGCAGGGACATCTCTCCTT...ACTTCTAAAGCCCTCCTGGAGAAGAATCTGCACAGACATGCTGGTGTTGTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR GCA 90 bp ACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGGACTTCTGCACAGGCTaGGTCAATTTGAGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: TFSDTSFKNVLQPCGHKEDFCTG*VNLSKA
Trigger: AGCTTTGCTCAAATTGACGCAGCCTGTGCAGAAGTC...CTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR GCA 90 bp ACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCACATCATCGGTGGAAATaGACACATCTTTCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: THLSRTSCNPVVTKSMRAHHRWK*THLSSL
Trigger: AAGAGAGGAAAGATGTGTGCATTTCCACCGATGATG...TGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGCATCATCGGTGGAAATaGACACATCTTTCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLHHRWK*THLSSL
Trigger: AAGAGAGGAAAGATGTGTGCATTTCCACCGATGATG...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp AACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACACTCCATTGGCTGGAGTaGTGCATGGATGTCTTTGTG +
Preference number: 4 (lower is better)
Translates to: NKHLVTHLSRTSCNPVVTLHWLE*CMDVFV
Trigger: CACAAAGACATCCATGCAGCACTCCAGCCAATGGAG...TGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp ATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTGTATCAACACAACATTaGCCATTCATGAACGGTCCA +
Preference number: 4 (lower is better)
Translates to: IFQERPATLWSQRVCVQGVSTQH*PFMNGP
Trigger: TGGACCGTTCATGAATGGGCAATGTTGTGTTGATAC...ACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp ACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCACATATTCCTTTCAGTTaGACCAGTAGAAAAGGCGGT +
Preference number: 4 (lower is better)
Translates to: THLSRTSCNPVVTKSMRAHIPFS*TSRKGG
Trigger: ACCGCCTTTTCTACTGGTGCAACTGAAAGGAATATG...TGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp ATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTGAGCTACCTTCTTTATaGCTTGTGGTCCAATGTATG +
Preference number: 4 (lower is better)
Translates to: IFQERPATLWSQRVCVQGELPSL*LVVQCM
Trigger: CATACATTGGACCACAAGGCATAAAGAAGGTAGCTC...ACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGGAGCTACCTTCTTTATaGCTTGTGGTCCAATGTATG +
Preference number: 4 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLELPSL*LVVQCM
Trigger: CATACATTGGACCACAAGGCATAAAGAAGGTAGCTC...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCAGCTCATCCCATTGCTTaGAAACTCACAAGATACCAG +
Preference number: 4 (lower is better)
Translates to: LFSNPISLATQTGFICVAAHPIA*KLTRYQ
Trigger: CTGGTATCTTGTGAGTTTGCAAGCAATGGGATGAGC...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp AGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGCTACCTAATTATTCATaGCTTGGAGATGCCGGTTTG +
Preference number: 4 (lower is better)
Translates to: SDTSFKNVLQPCGHKEYALPNYS*LGDAGL
Trigger: CAAACCGGCATCTCCAAGGCATGAATAATTAGGTAG...CGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTGGAGGGTACAATGAGTaGCTTCCATTATGCCTACCT +
Preference number: 4 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSGGYNE*LPLCLP
Trigger: AGGTAGGCATAATGGAAGGCACTCATTGTACCCTCC...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp ATCAGGAAGAACTATGCCTGGAGCATATGCTTCCATCACCACATCAGTGACTTCAACAGATCTTGTCCTTaGCCATCAGAGGAGCTGATT +
Preference number: 4 (lower is better)
Translates to: IRKNYAWSICFHHHISDFNRSCP*PSEELI
Trigger: AATCAGCTCCTCTGATGGGCAAGGACAAGATCTGTT...GAAGTCACTGATGTGGTGATGGAAGCATATGCTCCAGGCATAGTTCTTCCTGAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR GCA 90 bp AGAATTGATCAAGAGATTCTCAGTTCTCAATATCAGGAAGAACTATGCCTGGAGAAACTCAGCGTGGGCTaGTGGGCGAATGGCAATCGT +
Preference number: 4 (lower is better)
Translates to: RIDQEILSSQYQEELCLEKLSVG*WANGNR
Trigger: ACGATTGCCATTCGCCCAGCAGCCCACGCTGAGTTT...CTCCAGGCATAGTTCTTCCTGATATTGAGAACTGAGAATCTCTTGATCAATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR GCA 90 bp AGACAGAGGATACAAATCAAAGGTACTATCTGGGGAACTCCCTCCCTCATGCCTTTGTGTGTGCTGGACTaGGAGGCTGAATTATTAAAC +
Preference number: 4 (lower is better)
Translates to: RQRIQIKGTIWGTPSLMPLCVLD*EAELLN
Trigger: GTTTAATAATTCAGCCTCGCAGTCCAGCACACACAA...AGGCATGAGGGAGGGAGTTCCCCAGATAGTACCTTTGATTTGTATCCTCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR GCA 90 bp ATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTTTGTGTGTGCTGGACTaGGAGGCTGAATTATTAAAC +
Preference number: 4 (lower is better)
Translates to: IFQERPATLWSQRVCVQGLCVLD*EAELLN
Trigger: GTTTAATAATTCAGCCTCGCAGTCCAGCACACACAA...ACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp ATCAGGAAGAACTATGCCTGGAGCATATGCTTCCATCACCACATCAGTGACTTCTATGCCTGGAGCATATaGTTCCATCACCACATCAGT +
Preference number: 4 (lower is better)
Translates to: IRKNYAWSICFHHHISDFYAWSI*FHHHIS
Trigger: ACTGATGTGGTGATGGAAGCATATGCTCCAGGCATA...GAAGTCACTGATGTGGTGATGGAAGCATATGCTCCAGGCATAGTTCTTCCTGAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR GCA 90 bp GAGCTGAACTCCAAATGCACCCATGTTCATTCAGTAACAAATATCGACTGTGTATTCACGCTCTTCACGTaGAGCAAGTCCTGTGATGGC +
Preference number: 4 (lower is better)
Translates to: ELNSKCTHVHSVTNIDCVFTLFT*SKSCDG
Trigger: GCCATCACAGGACTTGCTGCACGTGAAGAGCGTGAA...TACACAGTCGATATTTGTTACTGAATGAACATGGGTGCATTTGGAGTTCAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558711.1
CDS-3UTR GCA 90 bp CAGGTTTCCAGAGAGTTAGGTTGCTTTAAAGTTGGCCATGCATTAAATAAAGCTTCTTTCGGGTCACAGTaGCCTCCTTCCGGTTTGTGC +
Preference number: 4 (lower is better)
Translates to: QVSRELGCFKVGHALNKASFGSQ*PPSGLC
Trigger: GCACAAACCGGAAGGAGGGCACTGTGACCCGAAAGA...AGCTTTATTTAATGCATGGCCAACTTTAAAGCAACCTAACTCTCTGGAAACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR GCA 90 bp AACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAGGTCTTTAGGTGTCTaGTCATTGAAGCCGTCCCAG +
Preference number: 4 (lower is better)
Translates to: NKHLVTHLSRTSCNPVVTRSLGV*SLKPSQ
Trigger: CTGGGACGGCTTCAATGAGCAGACACCTAAAGACCT...TGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR CCA 90 bp TGGGTTAAACAGAAGTTTAGCCCTATGCTACTTCTATGCTTCAATTACCTAGAACCCTCCTCTGGCTCCTaGCCACCATCATCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: WVKQKFSPMLLLCFNYLEPSSGS*PPSSES
Trigger: TGACTCTGATGATGGTGGCCAGGAGCCAGAGGAGGG...TTCTAGGTAATTGAAGCATAGAAGTAGCATAGGGCTAAACTTCTGTTTAACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp GTTCCCTTAAATAGTTTTCCATTGTTCCTGCGGCTTAATGAGGGACTTCTTAAACCAGGAGAGTGGGAGTaGCCTTCGGATCAGTTGCTT +
Preference number: 4 (lower is better)
Translates to: VPLNSFPLFLRLNEGLLKPGEWE*PSDQLL
Trigger: AAGCAACTGATCCGAAGGCCACTCCCACTCTCCTGG...TTTAAGAAGTCCCTCATTAAGCCGCAGGAACAATGGAAAACTATTTAAGGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CCA 90 bp CTATGCTTCAATTACCTAGAACATCCTTATGCTTTCTTTACTGCTGTGTCTGAAACTCCAGGGCCGCTCTaGCTCTCTTGGTCAGCATTG +
Preference number: 4 (lower is better)
Translates to: LCFNYLEHPYAFFTAVSETPGPL*LSWSAL
Trigger: CAATGCTGACCAAGAGAGCCAGAGCGGCCCTGGAGT...TTCAGACACAGCAGTAAAGAAAGCATAAGGATGTTCTAGGTAATTGAAGCATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCATTTGGGGGTGAGAGCTaGCTTAAAGAGGAGATATTC +
Preference number: 4 (lower is better)
Translates to: LFSNPISLATQTGFICVAFGGES*LKEEIF
Trigger: GAATATCTCCTCTTTAAGCCAGCTCTCACCCCCAAA...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp ACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGGGCTGGAGTGCTGCATaGATGTCTTTGTGGTCATTT +
Preference number: 4 (lower is better)
Translates to: TFSDTSFKNVLQPCGHKEGWSAA*MSLWSF
Trigger: AAATGACCACAAAGACATCCATGCAGCACTCCAGCC...CTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp TTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATACTGGGCTCGATGGCTaGTTTTCGAGGACATTGACT +
Preference number: 4 (lower is better)
Translates to: FSDTSFKNVLQPCGHKEYTGLDG*FSRTLT
Trigger: AGTCAATGTCCTCGAAAACCAGCCATCGAGCCCAGT...ATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp TTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGGTGCAGAATCTCTGCTaGCCCAGAAAAACCACAAAG +
Preference number: 4 (lower is better)
Translates to: LVTHLSRTSCNPVVTKSMVQNLC*PRKTTK
Trigger: CTTTGTGGTTTTTCTGGGCCAGCAGAGATTCTGCAC...CATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp AACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACATTTTCTCCTGGGAGTTaGGGTGCAGAATCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: NKHLVTHLSRTSCNPVVTFSPGS*GAESLL
Trigger: CAGCAGAGATTCTGCACCCCAACTCCCAGGAGAAAA...TGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp TGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCAAGATTTCAGAGACGTaGCTTAAAGACAAAAGTGTC +
Preference number: 4 (lower is better)
Translates to: CGHKEYACKVLHLQCHHFKISET*LKDKSV
Trigger: GACACTTTTGTCTTTAAGCCACGTCTCTGAAATCTT...GAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp ACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGGCCACATGTGGAGGCTaGATCAGGAAGGAATTTAAG +
Preference number: 4 (lower is better)
Translates to: TFSDTSFKNVLQPCGHKEATCGG*IRKEFK
Trigger: CTTAAATTCCTTCCTGATCCAGCCTCCACATGTGGC...CTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp TTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATCCACTTAAAGCCTGCTaGCAGGATGTGCTTAAGCTG +
Preference number: 4 (lower is better)
Translates to: FSDTSFKNVLQPCGHKEYPLKAC*QDVLKL
Trigger: CAGCTTAAGCACATCCTGCCAGCAGGCTTTAAGTGG...ATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp TCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCTCTTTGTTGTTTTTGTaGATGGAGATGAGTACTACA +
Preference number: 4 (lower is better)
Translates to: SRTSCNPVVTKSMRARSSSLLFL*MEMSTT
Trigger: TGTAGTACTCATCTCCATCCACAAAAACAACAAAGA...GGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCTGGATTTGTTTTCAATaGAAATGGAAGCCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: VVTKSMRARSSTSSAIISWICFQ*KWKPSK
Trigger: TTTGGAAGGCTTCCATTTCCATTGAAAACAAATCCA...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp AGAATTGATCAAGAGATTCTCAGTTCTCAATATCAGGAAGAACTATGCCTGGAGCAGTCACCAGCACTCTaGAAACAGTCATCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: RIDQEILSSQYQEELCLEQSPAL*KQSSSG
Trigger: CCCCGAGGATGACTGTTTCCAGAGTGCTGGTGACTG...CTCCAGGCATAGTTCTTCCTGATATTGAGAACTGAGAATCTCTTGATCAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTGGCTTTTTGTTCCCGTaGGTGCTCCTCTTATTGAGA +
Preference number: 4 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSGFLFP*VLLLLR
Trigger: TCTCAATAAGAGGAGCACCCACGGGAACAAAAAGCC...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp ACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGGGCTTTTTGTTCCCGTaGGTGCTCCTCTTATTGAGA +
Preference number: 4 (lower is better)
Translates to: TFSDTSFKNVLQPCGHKEGFLFP*VLLLLR
Trigger: TCTCAATAAGAGGAGCACCCACGGGAACAAAAAGCC...CTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp TTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGAAAGAGGAAGGGAGTaGCTGGAACAGATCTTGTCC +
Preference number: 4 (lower is better)
Translates to: FSDTSFKNVLQPCGHKEYERGRE*LEQILS
Trigger: GGACAAGATCTGTTCCAGCCACTCCCTTCCTCTTTC...ATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp AACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAACAGGTCCTGAACTTTaGCCACCACTTTGGAGACAG +
Preference number: 4 (lower is better)
Translates to: NKHLVTHLSRTSCNPVVTTGPEL*PPLWRQ
Trigger: CTGTCTCCAAAGTGGTGGCCAAAGTTCAGGACCTGT...TGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp AGAATTGATCAAGAGATTCTCAGTTCTCAATATCAGGAAGAACTATGCCTGGAGAGAAACAAGGACTTGTaGCCACCAAGGGGCAACCCG +
Preference number: 4 (lower is better)
Translates to: RIDQEILSSQYQEELCLERNKDL*PPRGNP
Trigger: CGGGTTGCCCCTTGGTGGCCACAAGTCCTTGTTTCT...CTCCAGGCATAGTTCTTCCTGATATTGAGAACTGAGAATCTCTTGATCAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp TTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGTCAGGACCTACTTTGTaGGGCAGATCCAGAAACAAG +
Preference number: 4 (lower is better)
Translates to: LVTHLSRTSCNPVVTKSMSGPTL*GRSRNK
Trigger: CTTGTTTCTGGATCTGCCCCACAAAGTAGGTCCTGA...CATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTTCTTCTTATCACCTCTaGGTTGTGAGGAGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSSSYHL*VVRSQD
Trigger: GTCCTGACTCCTCACAACCCAGAGGTGATAAGAAGA...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp ACTCAAGAGCATACTAAAGATTGGGCATTTCCCAAGTATGGTGAGCCAAGCTCCTCTGTTTGTGTGTGCTaGACTGCGAGGCTGAATTAT +
Preference number: 4 (lower is better)
Translates to: TQEHTKDWAFPKYGEPSSSVCVC*TARLNY
Trigger: ATAATTCAGCCTCGCAGTCCAGCACACACAAACAGA...GGAGCTTGGCTCACCATACTTGGGAAATGCCCAATCTTTAGTATGCTCTTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp ATCAGGAAGAACTATGCCTGGAGCATATGCTTCCATCACCACATCAGTGACTTCAACCTGGGAGAAAGGTaGGAGTTGGGTTCAGATAAA +
Preference number: 4 (lower is better)
Translates to: IRKNYAWSICFHHHISDFNLGER*ELGSDK
Trigger: TTTATCTGAACCCAACTCCCACCTTTCTCCCAGGTT...GAAGTCACTGATGTGGTGATGGAAGCATATGCTCCAGGCATAGTTCTTCCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp GGAAGAACTATGCCTGGAGCATATGCTTCCATCACCACATCAGTGACTTCAGTCATAAGCGGGTTTCACTaGTTCCTGGGAATTACTACT +
Preference number: 4 (lower is better)
Translates to: GRTMPGAYASITTSVTSVISGFH*FLGITT
Trigger: AGTAGTAATTCCCAGGAACCAGTGAAACCCGCTTAT...GACTGAAGTCACTGATGTGGTGATGGAAGCATATGCTCCAGGCATAGTTCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
3UTR CAA 72 bp CATTCACACACTGACTTGGCGCAATTTGCTGTGCTGTaGTATGCAATGATCTGCATCAATGACACTGGCCAA +
Preference number: 4 (lower is better)
Translates to: HSHTDLAQFAVL*YAMICINDTGQ
Trigger: TTGGCCAGTGTCATTGATGCAGATCATTGCATACAACAGCACAGCAAATTGCGCCAAGTCAGTGTGTGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR CAA 72 bp CAAGCGTGCATTGCTAATTCCCATTCACACACTGACTaGGCGCAATTTGCTGTGCTGTTGTATGCAATGATC +
Preference number: 4 (lower is better)
Translates to: QACIANSHSHTD*AQFAVLLYAMI
Trigger: GATCATTGCATACAACAGCACAGCAAATTGCGCCAAGTCAGTGTGTGAATGGGAATTAGCAATGCACGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
3UTR CAA 72 bp TTTACATTTCTGCTAGGTCTGATTCATACTAGGATGTaGACTGCCTTCACTCAGGTTCTAGGCATGCAGGCC +
Preference number: 4 (lower is better)
Translates to: FTFLLGLIHTRM*TAFTQVLGMQA
Trigger: GGCCTGCATGCCTAGAACCTGAGTGAAGGCAGTCAACATCCTAGTATGAATCAGACCTAGCAGAAATGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp CAGGTTTCCAGAGAGTTAGGTTGCTTTAAAGTTGGCCATGCATTAAATAAAGCTTCTCTGACTTCCCTCTaGTTCTGTCTCCACGCTTGC +
Preference number: 4 (lower is better)
Translates to: QVSRELGCFKVGHALNKASLTSL*FCLHAC
Trigger: GCAAGCGTGGAGACAGAATCAGAGGGAAGTCAGAGA...AGCTTTATTTAATGCATGGCCAACTTTAAAGCAACCTAACTCTCTGGAAACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR TCA 90 bp CTACTGAACCACCCAACTTTGATCTGTTCATGTCTATCAATGAACAGGAATGGATCAGGTGGAATCCTTTaGGGATCTTCTGCACAGAGC +
Preference number: 4 (lower is better)
Translates to: LLNHPTLICSCLSMNRNGSGGIL*GSSAQS
Trigger: GCTCTGTGCAGAAGATCCTCAAAGGATTCCACCTGA...TCCATTCCTGTTCATTGATAGACATGAACAGATCAAAGTTGGGTGGTTCAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR TCA 90 bp CTTCACACACATTCCCCCTTTCATTCATTCCACTGCATTCATCTTTCATCTTTCGCACACGAAGCCCACTaGAAAAAGCTGGAAGTTGGA +
Preference number: 4 (lower is better)
Translates to: LHTHSPFHSFHCIHLSSFAHEAH*KKLEVG
Trigger: TCCAACTTCCAGCTTTTTTCAGTGGGCTTCGTGTGC...GAAAGATGAAAGATGAATGCAGTGGAATGAATGAAAGGGGGAATGTGTGTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR TCA 90 bp GCAAACACCAGTTATTACGGAGCTGAACTCCAAATGCACCCATGTTCATTCAGTCAGAAAAGACAGATCTaGAGATTATGCACTGGGCAC +
Preference number: 4 (lower is better)
Translates to: ANTSYYGAELQMHPCSFSQKRQI*RLCTGH
Trigger: GTGCCCAGTGCATAATCTTCAGATCTGTCTTTTCTG...ACTGAATGAACATGGGTGCATTTGGAGTTCAGCTCCGTAATAACTGGTGTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558711.1
CDS-3UTR TCA 90 bp AAGCACACCCAAGGCTGTGCTTGCTCAGGTATTACATTTTCTCCTGGGAGTTGGTTCCAAAAGCCAAGATaGGAGCTAAAATATCCTTCA +
Preference number: 4 (lower is better)
Translates to: KHTQGCACSGITFSPGSWFQKPR*ELKYPS
Trigger: TGAAGGATATTTTAGCTCTCATCTTGGCTTTTGGAA...CCAACTCCCAGGAGAAAATGTAATACCTGAGCAAGCACAGCCTTGGGTGTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp CATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTTCCAAAAGCCAAGATaGGAGCTAAAATATCCTTCA +
Preference number: 4 (lower is better)
Translates to: HLSRTSCNPVVTKSMRARFQKPR*ELKYPS
Trigger: TGAAGGATATTTTAGCTCTCATCTTGGCTTTTGGAA...CCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCAAGTCAACTTGCTGACTaGTTCCTGAGCCATTTTCAA +
Preference number: 4 (lower is better)
Translates to: LFSNPISLATQTGFICVASQLAD*FLSHFQ
Trigger: TTGAAAATGGCTCAGGAATCAGTCAGCAAGTTGACT...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTCTGAAGTCAACTTGCTaGCTGATTCCTGAGCCATTT +
Preference number: 4 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSLKSTC*LIPEPF
Trigger: AAATGGCTCAGGAATCAGTCAGCAAGTTGACTTCAG...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp ACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGATGGCTTCTGTGACTTaGTTTGATCCTGACTGCAGT +
Preference number: 4 (lower is better)
Translates to: TFSDTSFKNVLQPCGHKEMASVT*FDPDCS
Trigger: ACTGCAGTCAGGATCAAATCAAGTCACAGAAGCCAT...CTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp TTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGTCTTCATGGTGCTTATaGAAACAGGAGGTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: LVTHLSRTSCNPVVTKSMSSWCL*KQEVPE
Trigger: TTCAGGCACCTCCTGTTTTCATAAGCACCATGAAGA...CATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp AACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAGTTCACATGAGCTCTTaGCTGAAGGACACGATCCTA +
Preference number: 4 (lower is better)
Translates to: NKHLVTHLSRTSCNPVVTVHMSS*LKDTIL
Trigger: TAGGATCGTGTCCTTCAGTCAAGAGCTCATGTGAAC...TGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp ACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCACCACAGAAAGTTACTTaGGATTCAAAAATCTGGCGT +
Preference number: 4 (lower is better)
Translates to: THLSRTSCNPVVTKSMRAPQKVT*DSKIWR
Trigger: ACGCCAGATTTTTGAATCTCAAGTAACTTTCTGTGG...TGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp TTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGTGTATGAAAATCCTCTaGCTTCCCCCTTTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: LVTHLSRTSCNPVVTKSMCMKIL*LPPLED
Trigger: GTCTTCCAAAGGGGGAAGTCAGAGGATTTTCATACA...CATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp AAACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACTACAGTGCCCTTGTATaGAAATCCTCTGACTTCCCC +
Preference number: 4 (lower is better)
Translates to: KQTFSDTSFKNVLQPCGHYSALV*KSSDFP
Trigger: GGGGAAGTCAGAGGATTTTCATACAAGGGCACTGTA...GTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp CGACTTTTGACATCCTTGAGTTTGGGCAGAATTTCTAAGCTATATCCATCGGCTGTGCAGCAAGTCCTGTaGTGGCAAACACCAGTTATT +
Preference number: 4 (lower is better)
Translates to: RLLTSLSLGRISKLYPSAVQQVL*WQTPVI
Trigger: AATAACTGGTGTTTGCCATCACAGGACTTGCTGCAC...AGCCGATGGATATAGCTTAGAAATTCTGCCCAAACTCAAGGATGTCAAAAGTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558711.1
CDS-3UTR TCA 90 bp CAGGTTTCCAGAGAGTTAGGTTGCTTTAAAGTTGGCCATGCATTAAATAAAGCTCCGTGTCGTGTGGTATaGCAACACCAGCATGTCTGT +
Preference number: 4 (lower is better)
Translates to: QVSRELGCFKVGHALNKAPCRVV*QHQHVC
Trigger: ACAGACATGCTGGTGTTGTCATACCACACGACACGG...AGCTTTATTTAATGCATGGCCAACTTTAAAGCAACCTAACTCTCTGGAAACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR TCA 90 bp TTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATCAATTCGCTCCTGTTTaGCTTCTCCCTTTCCTCATG +
Preference number: 4 (lower is better)
Translates to: FSDTSFKNVLQPCGHKEYQFAPV*LLPFLM
Trigger: CATGAGGAAAGGGAGAAGTCAAACAGGAGCGAATTG...ATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR GCA 90 bp CTTCACACACATTCCCCCTTTCATTCATTCCACTGCATTCATCTTTCATCTTTCGTGGATCCAAGCCATTaGTGGAATCATCCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: LHTHSPFHSFHCIHLSSFVDPSH*WNHPAE
Trigger: CTCAGCAGGATGATTCCAGCAATGGCTTGGATCCAC...GAAAGATGAAAGATGAATGCAGTGGAATGAATGAAAGGGGGAATGTGTGTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR GCA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCACATCATCGGTGGAAATaGACACATCTTTCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: LFSNPISLATQTGFICVAHHRWK*THLSSL
Trigger: AAGAGAGGAAAGATGTGTGCATTTCCACCGATGATG...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp GACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAACTCATGTAAAAATTaGTCAGGTTTATCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: DTSFKNVLQPCGHKEYACNSCKN*SGLSSS
Trigger: GCTGCTGGATAAACCTGAGCAATTTTTACATGAGTT...GCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp GAAAGACACCATCATCAACATAAGGATTCAAAAGGCAACTGTTGGGCAGTAGGAAAGGCGGTTAGCACCTaGATGAATATGGCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: ERHHHQHKDSKGNCWAVGKAVST*MNMASV
Trigger: CACAGAAGCCATATTCATGCAGGTGCTAACCGCCTT...TCCTACTGCCCAACAGTTGCCTTTTGAATCCTTATGTTGATGATGGTGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGGAGGCAGGCAAACCTTaGTTTGTAGAAATAGGTATT +
Preference number: 4 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLEAGKP*FVEIGI
Trigger: AATACCTATTTCTACAAAGCAAGGTTTGCCTGCCTC...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp AAGCACACCCAAGGCTGTGCTTGCTCAGGTATTACATTTTCTCCTGGGAGTTGGATAAACATCCACTTCTaGTTGGCCACACTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: KHTQGCACSGITFSPGSWINIHF*LATLFL
Trigger: AAGAAAAAGTGTGGCCAAGCAGAAGTGGATGTTTAT...CCAACTCCCAGGAGAAAATGTAATACCTGAGCAAGCACAGCCTTGGGTGTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp AACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAGGAGGGGAGACTGCATaGCATCTGATATTCAATTCC +
Preference number: 4 (lower is better)
Translates to: NKHLVTHLSRTSCNPVVTGGETA*HLIFNS
Trigger: GGAATTGAATATCAGATGGCATGCAGTCTCCCCTCC...TGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp CATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTGGTTTCATCTGTGTTaGAGATTTCTTTATGAGGTC +
Preference number: 4 (lower is better)
Translates to: HLSRTSCNPVVTKSMRARWFHLC*RFLYEV
Trigger: GACCTCATAAAGAAATCTGCAACACAGATGAAACCA...CCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCAGTCTTCTTTGCATTTTaGTGGCCCAATGTCATCAAG +
Preference number: 4 (lower is better)
Translates to: LFSNPISLATQTGFICVAVFFAF*WPNVIK
Trigger: CTTGATGACATTGGGCCAGCAAAATGCAAAGAAGAC...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp AACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACACAAGGCCACCCTGCTTaGCATGCTAGTCTAAATGAA +
Preference number: 4 (lower is better)
Translates to: NKHLVTHLSRTSCNPVVTQGHPA*HASLNE
Trigger: TTCATTTAGACTAGCATGGCAAGCAGGGTGGCCTTG...TGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp GACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCCTATCAGCAAAACATTaGACTAGCCTCGTTCAAATT +
Preference number: 4 (lower is better)
Translates to: DTSFKNVLQPCGHKEYACLSAKH*TSLVQI
Trigger: AATTTGAACGAGGCTAGTGCAATGTTTTGCTGATAG...GCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCACTACCTAATTATTCATaGCTTGGAGATGCCGGTTTG +
Preference number: 4 (lower is better)
Translates to: LFSNPISLATQTGFICVALPNYS*LGDAGL
Trigger: CAAACCGGCATCTCCAAGGCATGAATAATTAGGTAG...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR GCA 90 bp GGAAGAACTATGCCTGGAGCATATGCTTCCATCACCACATCAGTGACTTCAGTCGAGTGCCTTCCATTATaGCTACCTAATTATTCATGC +
Preference number: 4 (lower is better)
Translates to: GRTMPGAYASITTSVTSVECLPL*LPNYSC
Trigger: GCATGAATAATTAGGTAGGCATAATGGAAGGCACTC...GACTGAAGTCACTGATGTGGTGATGGAAGCATATGCTCCAGGCATAGTTCTTCC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR GCA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGGAGTGCCTTCCATTATaGCTACCTAATTATTCATGC +
Preference number: 4 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLECLPL*LPNYSC
Trigger: GCATGAATAATTAGGTAGGCATAATGGAAGGCACTC...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR GCA 90 bp TGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCTCCTTACCCTTAGAATaGGTTTTAACTACTCTTTGT +
Preference number: 4 (lower is better)
Translates to: CGHKEYACKVLHLQCHHFSLPLE*VLTTLC
Trigger: ACAAAGAGTAGTTAAAACGCATTCTAAGGGTAAGGA...GAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp CAATCTACCTTCTCCATCAGGTCCCCCAAGGTTCTCCTACTTCACACACATTCCGTGTCTGAATTGCTCTaGTCAGATGAAACAATCATT +
Preference number: 4 (lower is better)
Translates to: QSTFSIRSPKVLLLHTHSVSELL*SDETII
Trigger: AATGATTGTTTCATCTGAGCAGAGCAATTCAGACAC...GGAATGTGTGTGAAGTAGGAGAACCTTGGGGGACCTGATGGAGAAGGTAGATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR GCA 90 bp CTATGCTTCAATTACCTAGAACATCCTTATGCTTTCTTTACTGCTGTGTCTGAAAGAGATCAGGTTGTGTaGCCTCAGTTCCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LCFNYLEHPYAFFTAVSERDQVV*PQFPAW
Trigger: CCAGGCTGGGAACTGAGGGCACACAACCTGATCTCT...TTCAGACACAGCAGTAAAGAAAGCATAAGGATGTTCTAGGTAATTGAAGCATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp CTATGCTTCAATTACCTAGAACATCCTTATGCTTTCTTTACTGCTGTGTCTGAATGTCTCTGGCGACTTTaGCTTGACCTCACCACCCTG +
Preference number: 4 (lower is better)
Translates to: LCFNYLEHPYAFFTAVSECLWRL*LDLTTL
Trigger: CAGGGTGGTGAGGTCAAGCCAAAGTCGCCAGAGACA...TTCAGACACAGCAGTAAAGAAAGCATAAGGATGTTCTAGGTAATTGAAGCATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp CTTCACACACATTCCCCCTTTCATTCATTCCACTGCATTCATCTTTCATCTTTCTGTGTCTTTTGTCTTTaGGGGTGGCCAGACAGCTTG +
Preference number: 4 (lower is better)
Translates to: LHTHSPFHSFHCIHLSSFCVFCL*GWPDSL
Trigger: CAAGCTGTCTGGCCACCCCCAAAGACAAAAGACACA...GAAAGATGAAAGATGAATGCAGTGGAATGAATGAAAGGGGGAATGTGTGTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp AAGCACACCCAAGGCTGTGCTTGCTCAGGTATTACATTTTCTCCTGGGAGTTGGTGTAAAATAGCAGCTTaGTATTCTGCTTCAGTGTAC +
Preference number: 4 (lower is better)
Translates to: KHTQGCACSGITFSPGSWCKIAA*YSASVY
Trigger: GTACACTGAAGCAGAATACCAAGCTGCTATTTTACA...CCAACTCCCAGGAGAAAATGTAATACCTGAGCAAGCACAGCCTTGGGTGTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp CATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGGTTTCAGATTTTCAATaGTTTCTTCTAGTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: HLSRTSCNPVVTKSMRARVSDFQ*FLLVSL
Trigger: CAGCGAGACTAGAAGAAACCATTGAAAATCTGAAAC...CCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp GAAAGACACCATCATCAACATAAGGATTCAAAAGGCAACTGTTGGGCAGTAGGAGGCTGGAGTGCTGCATaGATGTCTTTGTGGTCATTT +
Preference number: 4 (lower is better)
Translates to: ERHHHQHKDSKGNCWAVGGWSAA*MSLWSF
Trigger: AAATGACCACAAAGACATCCATGCAGCACTCCAGCC...TCCTACTGCCCAACAGTTGCCTTTTGAATCCTTATGTTGATGATGGTGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp GACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCGTTGGTGTAGCATTTTaGCTCCTATCACTTATTTGT +
Preference number: 4 (lower is better)
Translates to: DTSFKNVLQPCGHKEYACVGVAF*LLSLIC
Trigger: ACAAATAAGTGATAGGAGCCAAAATGCTACACCAAC...GCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp GTTCCCTTAAATAGTTTTCCATTGTTCCTGCGGCTTAATGAGGGACTTCTTAAACTGGAGATACTCCTTTaGGGACTCCTTGCACACCAC +
Preference number: 4 (lower is better)
Translates to: VPLNSFPLFLRLNEGLLKLEILL*GLLAHH
Trigger: GTGGTGTGCAAGGAGTCCCCAAAGGAGTATCTCCAG...TTTAAGAAGTCCCTCATTAAGCCGCAGGAACAATGGAAAACTATTTAAGGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp TTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATTTGTCCTTGAAAGGCTaGAGATACTCCTTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: FSDTSFKNVLQPCGHKEYLSLKG*RYSFGD
Trigger: GTCCCCAAAGGAGTATCTCCAGCCTTTCAAGGACAA...ATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp GAAAGACACCATCATCAACATAAGGATTCAAAAGGCAACTGTTGGGCAGTAGGAGTGCAGAATCTCTGCTaGCCCAGAAAAACCACAAAG +
Preference number: 4 (lower is better)
Translates to: ERHHHQHKDSKGNCWAVGVQNLC*PRKTTK
Trigger: CTTTGTGGTTTTTCTGGGCCAGCAGAGATTCTGCAC...TCCTACTGCCCAACAGTTGCCTTTTGAATCCTTATGTTGATGATGGTGTCTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCACAGAGAGGTCAAAGGTaGTTTCCTTATGTGACTCAA +
Preference number: 4 (lower is better)
Translates to: LFSNPISLATQTGFICVAQRGQR*FPYVTQ
Trigger: TTGAGTCACATAAGGAAACCACCTTTGACCTCTCTG...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp TGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCAGATATTTAATATTTaGATCAGATATGTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: CGHKEYACKVLHLQCHHFQIFNI*IRYVGG
Trigger: CCCTCCCACATATCTGATCCAAATATTAAATATCTG...GAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp AACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACACAAATCCCATCAGCTTaGCCACACAGACTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: NKHLVTHLSRTSCNPVVTQIPSA*PHRLVS
Trigger: TGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTG...TGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp ACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGCAGTTTCCAGGCAGCTaGATTGTTTCTCTCTATAGC +
Preference number: 4 (lower is better)
Translates to: TFSDTSFKNVLQPCGHKEQFPGS*IVSLYS
Trigger: GCTATAGAGAGAAACAATCCAGCTGCCTGGAAACTG...CTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp CATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTTCTTTGCATTTTGCTaGCCCAATGTCATCAAGTTT +
Preference number: 4 (lower is better)
Translates to: HLSRTSCNPVVTKSMRARFFAFC*PNVIKF
Trigger: AAACTTGATGACATTGGGCCAGCAAAATGCAAAGAA...CCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTTGGGAAAGACAGATCTaGAAAGCGAACCCAGTTAAC +
Preference number: 4 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSWERQI*KANPVN
Trigger: GTTAACTGGGTTCGCTTTCCAGATCTGTCTTTCCCA...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp CTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCCTTTTAGTCCCTTACTaGGAAGAGCAGTATAATTTT +
Preference number: 4 (lower is better)
Translates to: LSRTSCNPVVTKSMRARSLLVPY*EEQYNF
Trigger: AAAATTATACTGCTCTTCCCAGTAAGGGACTAAAAG...GGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp GTGATGCTGACATTAACAAGAGGCAGTCACAGCAGTGTGTCTCACATGGGCTCCTTTCCCTCTCACTCATaGATTTGTTTTCAATGGAAA +
Preference number: 4 (lower is better)
Translates to: VMLTLTRGSHSSVSHMGSFPSHS*ICFQWK
Trigger: TTTCCATTGAAAACAAATCCATGAGTGAGAGGGAAA...GGAGCCCATGTGAGACACACTGCTGTGACTGCCTCTTGTTAATGTCAGCATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp TTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGTCTGTTTGTGTGTGCTaGACTGCGAGGCTGAATTAT +
Preference number: 4 (lower is better)
Translates to: LVTHLSRTSCNPVVTKSMSVCVC*TARLNY
Trigger: ATAATTCAGCCTCGCAGTCCAGCACACACAAACAGA...CATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp CTAGCACCAAGCTCCAAGGACACTGCTTTGCAGGCTAGCACAACTAGAGTTCCTACCATAAACTTAATCTaGTTAATAGCTAACCTGGGA +
Preference number: 4 (lower is better)
Translates to: LAPSSKDTALQASTTRVPTINLI*LIANLG
Trigger: TCCCAGGTTAGCTATTAACCAGATTAAGTTTATGGT...AGGAACTCTAGTTGTGCTAGCCTGCAAAGCAGTGTCCTTGGAGCTTGGTGCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp AACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAGGCTGTGGTCAGGATaGAGATCCAAGTACAATTCG +
Preference number: 4 (lower is better)
Translates to: NKHLVTHLSRTSCNPVVTRLWSG*RSKYNS
Trigger: CGAATTGTACTTGGATCTCCATCCTGACCACAGCCT...TGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR TCA 90 bp TGTTTTCAATGGAAATGGAAGCCTTCCAAATATTATGCAGAACACAATCTCAGTGTCTCATCTTGCGCTTaGGAGCTTCCAGCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: CFQWKWKPSKYYAEHNLSVSSCA*ELPAQR
Trigger: CCTCTGAGCTGGAAGCTCTCAAGCGCAAGATGAGAC...ACTGAGATTGTGTTCTGCATAATATTTGGAAGGCTTCCATTTCCATTGAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR TCA 90 bp AACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACACAGAAAAGACAGATCTaGAGATTATGCACTGGGCAC +
Preference number: 4 (lower is better)
Translates to: NKHLVTHLSRTSCNPVVTQKRQI*RLCTGH
Trigger: GTGCCCAGTGCATAATCTTCAGATCTGTCTTTTCTG...TGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp ACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTGTGCATTCTCCAAGTaGCTTTCTTCCATCTTATGC +
Preference number: 4 (lower is better)
Translates to: TFSDTSFKNVLQPCGHKECAFSK*LSSILC
Trigger: GCATAAGATGGAAGAAAGTCACTTGGAGAATGCACA...CTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTAGACTGCATGCCATCTaGTATTCAATTCCTCAACCA +
Preference number: 4 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSRLHAI*YSIPQP
Trigger: TGGTTGAGGAATTGAATATCAGATGGCATGCAGTCT...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTTGCTGTTGTATGCAATaGTCTGCATCAATGACACTG +
Preference number: 4 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSCCCMQ*SASMTL
Trigger: CAGTGTCATTGATGCAGATCATTGCATACAACAGCA...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp TTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATTTCATACTAGGATGTTaGCTGCCTTCACTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: FSDTSFKNVLQPCGHKEYFILGC*LPSLRF
Trigger: GAACCTGAGTGAAGGCAGTCAACATCCTAGTATGAA...ATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp ACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGCTAATACAGATGCCTTaGATTTCCACGGAAAAGCTG +
Preference number: 4 (lower is better)
Translates to: TFSDTSFKNVLQPCGHKELIQMP*ISTEKL
Trigger: CAGCTTTTCCGTGGAAATTCAAGGCATCTGTATTAG...CTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp AACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAGCTGGTGACCCGGTCTaGTGTACAAATTTATCAAGA +
Preference number: 4 (lower is better)
Translates to: NKHLVTHLSRTSCNPVVTAGDPV*CTNLSR
Trigger: TCTTGATAAATTTGTACATCAGACCGGGTCACCAGC...TGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp TGGGTTAAACAGAAGTTTAGCCCTATGCTACTTCTATGCTTCAATTACCTAGAATTCCGGTTTGTGCGATaGTGTGTTCCAGGGCAACTG +
Preference number: 4 (lower is better)
Translates to: WVKQKFSPMLLLCFNYLEFRFVR*CVPGQL
Trigger: CAGTTGCCCTGGAACACATCATCGCACAAACCGGAA...TTCTAGGTAATTGAAGCATAGAAGTAGCATAGGGCTAAACTTCTGTTTAACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR GCA 90 bp ATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTAGTTCAAACTGTGCCTaGAGGTTTTCAATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: IFQERPATLWSQRVCVQGSSNCA*RFSISS
Trigger: AGAAGAAATTGAAAACCTGCAGGCACAGTTTGAACT...ACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp GTTCCCTTAAATAGTTTTCCATTGTTCCTGCGGCTTAATGAGGGACTTCTTAAACATTGGCTGGAGTGCTaGATGGATGTCTTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: VPLNSFPLFLRLNEGLLKHWLEC*MDVFVV
Trigger: GACCACAAAGACATCCATGCAGCACTCCAGCCAATG...TTTAAGAAGTCCCTCATTAAGCCGCAGGAACAATGGAAAACTATTTAAGGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp TTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGTTTTCCATTGTTCCTaGGGCTTAATGAGGGACTTC +
Preference number: 4 (lower is better)
Translates to: FSDTSFKNVLQPCGHKEYVFHCS*GLMRDF
Trigger: GAAGTCCCTCATTAAGCCGCAGGAACAATGGAAAAC...ATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp TTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGGATGCTGCAGGATTTTaGTGCAACAGGATCAAAACT +
Preference number: 4 (lower is better)
Translates to: LVTHLSRTSCNPVVTKSMDAAGF*CNRIKT
Trigger: AGTTTTGATCCTGTTGCAGCAAAATCCTGCAGCATC...CATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp GCCTCTAATAAGGTGTCAACAGCGGACAGGTGTGCAGAAATGACACAAAATGGGATAAACATCCACTTCTaGTTGGCCACACTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: ASNKVSTADRCAEMTQNGINIHF*LATLFL
Trigger: AAGAAAAAGTGTGGCCAAGCAGAAGTGGATGTTTAT...CCCATTTTGTGTCATTTCTGCACACCTGTCCGCTGTTGACACCTTATTAGAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCATTGTATGCAATGATCTaGATCAATGACACTGGCCAA +
Preference number: 4 (lower is better)
Translates to: LFSNPISLATQTGFICVALYAMI*INDTGQ
Trigger: TTGGCCAGTGTCATTGATGCAGATCATTGCATACAA...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp AAACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAGAGCCTGCAAGCGTaGATTGCTAATTCCCATTCA +
Preference number: 4 (lower is better)
Translates to: KQTFSDTSFKNVLQPCGHKSLQA*IANSHS
Trigger: TGAATGGGAATTAGCAATGCACGCTTGCAGGCTCTT...GTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp AACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAACAGATCTTGTCCTTaGCCATCAGAGGAGCTGATT +
Preference number: 4 (lower is better)
Translates to: NKHLVTHLSRTSCNPVVTNRSCP*PSEELI
Trigger: AATCAGCTCCTCTGATGGGCAAGGACAAGATCTGTT...TGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp AGAATTGATCAAGAGATTCTCAGTTCTCAATATCAGGAAGAACTATGCCTGGAGTTGGAGACAGGTTTCTaGTTGCAAGTCCGCTTAGCC +
Preference number: 4 (lower is better)
Translates to: RIDQEILSSQYQEELCLELETGF*LQVRLA
Trigger: GGCTAAGCGGACTTGCAAGCAGAAACCTGTCTCCAA...CTCCAGGCATAGTTCTTCCTGATATTGAGAACTGAGAATCTCTTGATCAATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR GCA 90 bp TGGGTTAAACAGAAGTTTAGCCCTATGCTACTTCTATGCTTCAATTACCTAGAAAGCGACTTCTACTCTTaGCCCTTCAGGCTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: WVKQKFSPMLLLCFNYLESDFYS*PFRLGC
Trigger: ACACCCAAGCCTGAAGGGGCAAGAGTAGAAGTCGCT...TTCTAGGTAATTGAAGCATAGAAGTAGCATAGGGCTAAACTTCTGTTTAACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp CAAAAGCATTACTCGAAGACAAACAACAAATCAGATTACAGCTCTAGAGAACCATGTGGTCAGGACTTTTaGAATCAGAGGGGCCATCCG +
Preference number: 4 (lower is better)
Translates to: QKHYSKTNNKSDYSSREPCGQDF*NQRGHP
Trigger: CGGATGGCCCCTCTGATTCCAAAAGTCCTGACCACA...TGGTTCTCTAGAGCTGTAATCTGATTTGTTGTTTGTCTTCGAGTAATGCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp ACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCATGTAAAATAGCAGCTTaGTATTCTGCTTCAGTGTAC +
Preference number: 4 (lower is better)
Translates to: THLSRTSCNPVVTKSMRACKIAA*YSASVY
Trigger: GTACACTGAAGCAGAATACCAAGCTGCTATTTTACA...TGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp ACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAGTTGGTGTAGCATTTTaGCTCCTATCACTTATTTGT +
Preference number: 4 (lower is better)
Translates to: THLSRTSCNPVVTKSMRAVGVAF*LLSLIC
Trigger: ACAAATAAGTGATAGGAGCCAAAATGCTACACCAAC...TGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp ATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTAAGATTTCAGAGACGTaGCTTAAAGACAAAAGTGTC +
Preference number: 4 (lower is better)
Translates to: IFQERPATLWSQRVCVQGKISET*LKDKSV
Trigger: GACACTTTTGTCTTTAAGCCACGTCTCTGAAATCTT...ACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp TGTTTTCAATGGAAATGGAAGCCTTCCAAATATTATGCAGAACACAATCTCAGTCTGGCAGGCATATCCTaGGAAGATGCTCAGGCACCT +
Preference number: 4 (lower is better)
Translates to: CFQWKWKPSKYYAEHNLSLAGIS*EDAQAP
Trigger: AGGTGCCTGAGCATCTTCCCAGGATATGCCTGCCAG...ACTGAGATTGTGTTCTGCATAATATTTGGAAGGCTTCCATTTCCATTGAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGATGAAGATTCTGCCATaGTGTCTTACAACACTAACA +
Preference number: 4 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLMKILP*CLTTLT
Trigger: TGTTAGTGTTGTAAGACACCATGGCAGAATCTTCAT...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp GAAAGACACCATCATCAACATAAGGATTCAAAAGGCAACTGTTGGGCAGTAGGAATTCACACACTGACTTaGCGCAATTTGCTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: ERHHHQHKDSKGNCWAVGIHTLT*RNLLCC
Trigger: ACAGCACAGCAAATTGCGCCAAGTCAGTGTGTGAAT...TCCTACTGCCCAACAGTTGCCTTTTGAATCCTTATGTTGATGATGGTGTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp AACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACATGGGAAAGACAGATCTaGAAAGCGAACCCAGTTAAC +
Preference number: 4 (lower is better)
Translates to: NKHLVTHLSRTSCNPVVTWERQI*KANPVN
Trigger: GTTAACTGGGTTCGCTTTCCAGATCTGTCTTTCCCA...TGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp ATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTAGACATAAAACTGCATaGATCAGGTGCACTTTAGAA +
Preference number: 4 (lower is better)
Translates to: IFQERPATLWSQRVCVQGRHKTA*IRCTLE
Trigger: TTCTAAAGTGCACCTGATCCATGCAGTTTTATGTCT...ACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp TGTTTTCAATGGAAATGGAAGCCTTCCAAATATTATGCAGAACACAATCTCAGTAGAAACAAGGACTTGTaGCCACCAAGGGGCAACCCG +
Preference number: 4 (lower is better)
Translates to: CFQWKWKPSKYYAEHNLSRNKDL*PPRGNP
Trigger: CGGGTTGCCCCTTGGTGGCCACAAGTCCTTGTTTCT...ACTGAGATTGTGTTCTGCATAATATTTGGAAGGCTTCCATTTCCATTGAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR CCA 90 bp GTGAGCCAAGCTCCCTGTGATTCTTCTGGCACTAAAAGGGTTTACTTTGAATCATACAGTTCTTATGACTaGTTCCTGAAAGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VSQAPCDSSGTKRVYFESYSSYD*FLKVLL
Trigger: CAGCAGCACTTTCAGGAACCAGTCATAAGAACTGTA...TGATTCAAAGTAAACCCTTTTAGTGCCAGAAGAATCACAGGGAGCTTGGCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTTGTAAAATAGCAGCTTaGTATTCTGGAGGTGACTGG +
Preference number: 4 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSCKIAA*YSGGDW
Trigger: CCAGTCACCTCCAGAATACCAAGCTGCTATTTTACA...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561249.5
3UTR CAA 72 bp AATATAACCCTCCCACAGGATGATAATAACAGAAGCTaGTCTTTGTGCCCTTGTACTAAACTCCCGTGTCGT +
Preference number: 4 (lower is better)
Translates to: NITLPQDDNNRS*SLCPCTKLPCR
Trigger: ACGACACGGGAGTTTAGTACAAGGGCACAAAGACAAGCTTCTGTTATTATCATCCTGTGGGAGGGTTATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR TCA 90 bp AAACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACTGTGCATTCTCCAAGTaGCTTTCTTCCATCTTATGC +
Preference number: 4 (lower is better)
Translates to: KQTFSDTSFKNVLQPCGHCAFSK*LSSILC
Trigger: GCATAAGATGGAAGAAAGTCACTTGGAGAATGCACA...GTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp TTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATTGTGCATTCTCCAAGTaGCTTTCTTCCATCTTATGC +
Preference number: 4 (lower is better)
Translates to: FSDTSFKNVLQPCGHKEYCAFSK*LSSILC
Trigger: GCATAAGATGGAAGAAAGTCACTTGGAGAATGCACA...ATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp TGTTTTCAATGGAAATGGAAGCCTTCCAAATATTATGCAGAACACAATCTCAGTACACGTAGCTGGGTGTaGTCTCCTTCTCACCAGACT +
Preference number: 4 (lower is better)
Translates to: CFQWKWKPSKYYAEHNLSTRSWV*SPSHQT
Trigger: AGTCTGGTGAGAAGGAGATCACACCCAGCTACGTGT...ACTGAGATTGTGTTCTGCATAATATTTGGAAGGCTTCCATTTCCATTGAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp AACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACACTAATACAGATGCCTTaGATTTCCACGGAAAAGCTG +
Preference number: 4 (lower is better)
Translates to: NKHLVTHLSRTSCNPVVTLIQMP*ISTEKL
Trigger: CAGCTTTTCCGTGGAAATTCAAGGCATCTGTATTAG...TGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp AGAATTGATCAAGAGATTCTCAGTTCTCAATATCAGGAAGAACTATGCCTGGAGATTTCCCAAGTATGGTaGGCCAAGCTCCCTGTGATT +
Preference number: 4 (lower is better)
Translates to: RIDQEILSSQYQEELCLEISQVW*AKLPVI
Trigger: AATCACAGGGAGCTTGGCTCACCATACTTGGGAAAT...CTCCAGGCATAGTTCTTCCTGATATTGAGAACTGAGAATCTCTTGATCAATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR TCA 90 bp CAGGTTTCCAGAGAGTTAGGTTGCTTTAAAGTTGGCCATGCATTAAATAAAGCTCCTTGGTGGAAGTTCTaGCTTGTGTTACCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: QVSRELGCFKVGHALNKAPWWKF*LVLPSP
Trigger: AGGAGAAGGTAACACAAGTCAGAACTTCCACCAAGG...AGCTTTATTTAATGCATGGCCAACTTTAAAGCAACCTAACTCTCTGGAAACCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR GCA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTGTTCTGACACATCACTaGCATCCAGAGAATTATCAA +
Preference number: 4 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSVLTHH*HPENYQ
Trigger: TTGATAATTCTCTGGATGGCAGTGATGTGTCAGAAC...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR GCA 90 bp TGGGTTAAACAGAAGTTTAGCCCTATGCTACTTCTATGCTTCAATTACCTAGAACAGCTTCCAGTTTGCTaGTCATCTCAGGTGGAATCC +
Preference number: 4 (lower is better)
Translates to: WVKQKFSPMLLLCFNYLEQLPVC*SSQVES
Trigger: GGATTCCACCTGAGATGAGCAGCAAACTGGAAGCTG...TTCTAGGTAATTGAAGCATAGAAGTAGCATAGGGCTAAACTTCTGTTTAACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR GCA 90 bp GTTCCCTTAAATAGTTTTCCATTGTTCCTGCGGCTTAATGAGGGACTTCTTAAAGGCCTTCGGATCAGTTaGTTTCTTCTCACTCTTCAC +
Preference number: 4 (lower is better)
Translates to: VPLNSFPLFLRLNEGLLKGLRIS*FLLTLH
Trigger: GTGAAGAGTGAGAAGAAAGCAACTGATCCGAAGGCC...TTTAAGAAGTCCCTCATTAAGCCGCAGGAACAATGGAAAACTATTTAAGGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR GCA 90 bp TGGGTTAAACAGAAGTTTAGCCCTATGCTACTTCTATGCTTCAATTACCTAGAAAGACAGCTTGAAGTCTaGCAGGAGTCCTGTCATCCT +
Preference number: 4 (lower is better)
Translates to: WVKQKFSPMLLLCFNYLERQLEV*QESCHP
Trigger: AGGATGACAGGACTCCTGGCAGACTTCAAGCTGTCT...TTCTAGGTAATTGAAGCATAGAAGTAGCATAGGGCTAAACTTCTGTTTAACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR GCA 90 bp AAACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACCCGAAGTTCAAACTGTaGCTGCAGGTTTTCAATTTC +
Preference number: 4 (lower is better)
Translates to: KQTFSDTSFKNVLQPCGHPKFKL*LQVFNF
Trigger: GAAATTGAAAACCTGCAGGCACAGTTTGAACTTCGG...GTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp ACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTCGGCTTTTCTGTTTTaGTTGTCTCGTTCCTTCATT +
Preference number: 4 (lower is better)
Translates to: TFSDTSFKNVLQPCGHKESAFLF*LSRSFI
Trigger: AATGAAGGAACGAGACAAGCAAAACAGAAAAGCCGA...CTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp AACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAGTCTTCTTTGCATTTTaGTGGCCCAATGTCATCAAG +
Preference number: 4 (lower is better)
Translates to: NKHLVTHLSRTSCNPVVTVFFAF*WPNVIK
Trigger: CTTGATGACATTGGGCCAGCAAAATGCAAAGAAGAC...TGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTTCTTGCTCATCCCATTaGTTGCAAACTCACAAGATA +
Preference number: 4 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSSCSSH*LQTHKI
Trigger: TATCTTGTGAGTTTGCAAGCAATGGGATGAGCAAGA...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp GTTCCCTTAAATAGTTTTCCATTGTTCCTGCGGCTTAATGAGGGACTTCTTAAACATCTCATCCTTTTCTaGCTCTGGATGCTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: VPLNSFPLFLRLNEGLLKHLILF*LWMLLR
Trigger: CCTGAGAAGCATCCAGAGGCAGAAAAGGATGAGATG...TTTAAGAAGTCCCTCATTAAGCCGCAGGAACAATGGAAAACTATTTAAGGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR GCA 90 bp AGACAGAGGATACAAATCAAAGGTACTATCTGGGGAACTCCCTCCCTCATGCCTTCCTTACCCTTAGAATaGGTTTTAACTACTCTTTGT +
Preference number: 4 (lower is better)
Translates to: RQRIQIKGTIWGTPSLMPSLPLE*VLTTLC
Trigger: ACAAAGAGTAGTTAAAACGCATTCTAAGGGTAAGGA...AGGCATGAGGGAGGGAGTTCCCCAGATAGTACCTTTGATTTGTATCCTCTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CCA 90 bp TTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGTTCACGTCTAAACTATaGAATGCTTTCAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: LVTHLSRTSCNPVVTKSMFTSKL*NAFSTA
Trigger: TGCTGTGCTGAAAGCATTCCATAGTTTAGACGTGAA...CATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CCA 90 bp AAACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACTCTTCAAACTTGACTTaGGAGGCCAGAAAGAAATCC +
Preference number: 4 (lower is better)
Translates to: KQTFSDTSFKNVLQPCGHSSNLT*EARKKS
Trigger: GGATTTCTTTCTGGCCTCCCAAGTCAAGTTTGAAGA...GTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp TGTTTTCAATGGAAATGGAAGCCTTCCAAATATTATGCAGAACACAATCTCAGTCTGGAGATACTCCTTTaGGGACTCCTTGCACACCAC +
Preference number: 4 (lower is better)
Translates to: CFQWKWKPSKYYAEHNLSLEILL*GLLAHH
Trigger: GTGGTGTGCAAGGAGTCCCCAAAGGAGTATCTCCAG...ACTGAGATTGTGTTCTGCATAATATTTGGAAGGCTTCCATTTCCATTGAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp AACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAGAGTTGCAACATTATTaGAGAGAAAGATGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: NKHLVTHLSRTSCNPVVTELQHY*RERCCR
Trigger: CCTGCAGCATCTTTCTCTCCAATAATGTTGCAACTC...TGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp AAACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACGAGTTGCAACATTATTaGAGAGAAAGATGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: KQTFSDTSFKNVLQPCGHELQHY*RERCCR
Trigger: CCTGCAGCATCTTTCTCTCCAATAATGTTGCAACTC...GTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp TGTTTTCAATGGAAATGGAAGCCTTCCAAATATTATGCAGAACACAATCTCAGTGTACATTGGTGGACTTaGGAGGGGGCATCCCAGATA +
Preference number: 4 (lower is better)
Translates to: CFQWKWKPSKYYAEHNLSVHWWT*EGASQI
Trigger: TATCTGGGATGCCCCCTCCCAAGTCCACCAATGTAC...ACTGAGATTGTGTTCTGCATAATATTTGGAAGGCTTCCATTTCCATTGAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCAATTCCTCAACCATACTaGCAATTTGTTTTGGCTAGA +
Preference number: 4 (lower is better)
Translates to: LFSNPISLATQTGFICVAIPQPY*QFVLAR
Trigger: TCTAGCCAAAACAAATTGCCAGTATGGTTGAGGAAT...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp TGGGTTAAACAGAAGTTTAGCCCTATGCTACTTCTATGCTTCAATTACCTAGAAGTAAAAGCTTCTCCTTaGTACTGGCCCCAGAGTAGC +
Preference number: 4 (lower is better)
Translates to: WVKQKFSPMLLLCFNYLEVKASP*YWPQSS
Trigger: GCTACTCTGGGGCCAGTACCAAGGAGAAGCTTTTAC...TTCTAGGTAATTGAAGCATAGAAGTAGCATAGGGCTAAACTTCTGTTTAACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp TGGGTTAAACAGAAGTTTAGCCCTATGCTACTTCTATGCTTCAATTACCTAGAAAACTCCCGTGTCGTGTaGTATGACAACACCAGCATG +
Preference number: 4 (lower is better)
Translates to: WVKQKFSPMLLLCFNYLENSRVV*YDNTSM
Trigger: CATGCTGGTGTTGTCATACCACACGACACGGGAGTT...TTCTAGGTAATTGAAGCATAGAAGTAGCATAGGGCTAAACTTCTGTTTAACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR TCA 90 bp TTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATTTGCTGACTGATTCCTaGGCCATTTTCAATCTTTCT +
Preference number: 4 (lower is better)
Translates to: FSDTSFKNVLQPCGHKEYLLTDS*AIFNLS
Trigger: AGAAAGATTGAAAATGGCTCAGGAATCAGTCAGCAA...ATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR TCA 90 bp GTTCCCTTAAATAGTTTTCCATTGTTCCTGCGGCTTAATGAGGGACTTCTTAAAGCTGGTGACCCGGTCTaGTGTACAAATTTATCAAGA +
Preference number: 4 (lower is better)
Translates to: VPLNSFPLFLRLNEGLLKAGDPV*CTNLSR
Trigger: TCTTGATAAATTTGTACATCAGACCGGGTCACCAGC...TTTAAGAAGTCCCTCATTAAGCCGCAGGAACAATGGAAAACTATTTAAGGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp ATTATGGAAAAACCTACTGAACCACCCAACTTTGATCTGTTCATGTCTATCAATGCTCACAAAATTGTATaGGGACCAACCACCGGCTTC +
Preference number: 4 (lower is better)
Translates to: IMEKPTEPPNFDLFMSINAHKIV*GPTTGF
Trigger: GAAGCCGGTGGTTGGTCCTCATACAATTTTGTGAGC...ATTGATAGACATGAACAGATCAAAGTTGGGTGGTTCAGTAGGTTTTTCCATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR TCA 90 bp CAGGTTTCCAGAGAGTTAGGTTGCTTTAAAGTTGGCCATGCATTAAATAAAGCTGTTCCAGGGCAACTGTaGAAAATCTGTGGAGTCTAT +
Preference number: 4 (lower is better)
Translates to: QVSRELGCFKVGHALNKAVPGQL*KICGVY
Trigger: ATAGACTCCACAGATTTTTCACAGTTGCCCTGGAAC...AGCTTTATTTAATGCATGGCCAACTTTAAAGCAACCTAACTCTCTGGAAACCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR GCA 90 bp TGTTTTCAATGGAAATGGAAGCCTTCCAAATATTATGCAGAACACAATCTCAGTTGGTCACAAAGAGTATaGGTGCAAGGTCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: CFQWKWKPSKYYAEHNLSWSQRV*VQGPPP
Trigger: AGGTGGAGGACCTTGCACGCATACTCTTTGTGACCA...ACTGAGATTGTGTTCTGCATAATATTTGGAAGGCTTCCATTTCCATTGAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp GTTCCCTTAAATAGTTTTCCATTGTTCCTGCGGCTTAATGAGGGACTTCTTAAAGTTTTCCATTGTTCCTaGGGCTTAATGAGGGACTTC +
Preference number: 4 (lower is better)
Translates to: VPLNSFPLFLRLNEGLLKVFHCS*GLMRDF
Trigger: GAAGTCCCTCATTAAGCCGCAGGAACAATGGAAAAC...TTTAAGAAGTCCCTCATTAAGCCGCAGGAACAATGGAAAACTATTTAAGGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp GAAAGACACCATCATCAACATAAGGATTCAAAAGGCAACTGTTGGGCAGTAGGACTGGCACTTTTCTTGTaGATGATAACACTAGAAGGA +
Preference number: 4 (lower is better)
Translates to: ERHHHQHKDSKGNCWAVGLALFL*MITLEG
Trigger: TCCTTCTAGTGTTATCATGCACAAGAAAAGTGCCAG...TCCTACTGCCCAACAGTTGCCTTTTGAATCCTTATGTTGATGATGGTGTCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp TTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGACTTATGATATTGTGTaGTCTGATGCTGTCAATTGC +
Preference number: 4 (lower is better)
Translates to: LVTHLSRTSCNPVVTKSMTYDIV*SDAVNC
Trigger: GCAATTGACAGCATCAGAGCACACAATATCATAAGT...CATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp AAACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACATCATAGAGAAAATGTaGAATCCCAGGCCAATAAGC +
Preference number: 4 (lower is better)
Translates to: KQTFSDTSFKNVLQPCGHIIEKM*NPRPIS
Trigger: GCTTATTGGCCTGGGATTGCACATTTTCTCTATGAT...GTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp GTTCCCTTAAATAGTTTTCCATTGTTCCTGCGGCTTAATGAGGGACTTCTTAAAAACAGCGGACAGGTGTaGAGAAATGACACAAAATGG +
Preference number: 4 (lower is better)
Translates to: VPLNSFPLFLRLNEGLLKNSGQV*RNDTKW
Trigger: CCATTTTGTGTCATTTCTGCACACCTGTCCGCTGTT...TTTAAGAAGTCCCTCATTAAGCCGCAGGAACAATGGAAAACTATTTAAGGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp ACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGAGACAGTTAGCCAGCTaGCATTTTAATATCTTCATG +
Preference number: 4 (lower is better)
Translates to: TFSDTSFKNVLQPCGHKERQLAS*HFNIFM
Trigger: CATGAAGATATTAAAATGGCAGCTGGCTAACTGTCT...CTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp TTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCTATCAGCAAAACATTaGACTAGCCTCGTTCAAATT +
Preference number: 4 (lower is better)
Translates to: LVTHLSRTSCNPVVTKSMLSAKH*TSLVQI
Trigger: AATTTGAACGAGGCTAGTGCAATGTTTTGCTGATAG...CATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp CTACTGAACCACCCAACTTTGATCTGTTCATGTCTATCAATGAACAGGAATGGATCCTTTCACATTACCTaGTTCAGTGTACTTCAGTCC +
Preference number: 4 (lower is better)
Translates to: LLNHPTLICSCLSMNRNGSFHIT*FSVLQS
Trigger: GGACTGAAGTACACTGAAGCAGGTAATGTGAAAGGA...TCCATTCCTGTTCATTGATAGACATGAACAGATCAAAGTTGGGTGGTTCAGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTGTTTCAGATTTTCAATaGTTTCTTCTAGTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSVSDFQ*FLLVSL
Trigger: CAGCGAGACTAGAAGAAACCATTGAAAATCTGAAAC...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp GTTCCCTTAAATAGTTTTCCATTGTTCCTGCGGCTTAATGAGGGACTTCTTAAATTTGGGGGTGAGAGCTaGCTTAAAGAGGAGATATTC +
Preference number: 4 (lower is better)
Translates to: VPLNSFPLFLRLNEGLLKFGGES*LKEEIF
Trigger: GAATATCTCCTCTTTAAGCCAGCTCTCACCCCCAAA...TTTAAGAAGTCCCTCATTAAGCCGCAGGAACAATGGAAAACTATTTAAGGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTGTTGGTGTAGCATTTTaGCTCCTATCACTTATTTGT +
Preference number: 4 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSVGVAF*LLSLIC
Trigger: ACAAATAAGTGATAGGAGCCAAAATGCTACACCAAC...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp GAAAGACACCATCATCAACATAAGGATTCAAAAGGCAACTGTTGGGCAGTAGGACTGAAGATTATGCACTaGGCACGTTCAGCAAAATTA +
Preference number: 4 (lower is better)
Translates to: ERHHHQHKDSKGNCWAVGLKIMH*ARSAKL
Trigger: TAATTTTGCTGAACGTGCCCAGTGCATAATCTTCAG...TCCTACTGCCCAACAGTTGCCTTTTGAATCCTTATGTTGATGATGGTGTCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp AAACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACCTGAAGATTATGCACTaGGCACGTTCAGCAAAATTA +
Preference number: 4 (lower is better)
Translates to: KQTFSDTSFKNVLQPCGHLKIMH*ARSAKL
Trigger: TAATTTTGCTGAACGTGCCCAGTGCATAATCTTCAG...GTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp TTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATCTGAAGATTATGCACTaGGCACGTTCAGCAAAATTA +
Preference number: 4 (lower is better)
Translates to: FSDTSFKNVLQPCGHKEYLKIMH*ARSAKL
Trigger: TAATTTTGCTGAACGTGCCCAGTGCATAATCTTCAG...ATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCATGGATTTGTTTTCAATaGAAATGGAAGCCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: LFSNPISLATQTGFICVAWICFQ*KWKPSK
Trigger: TTTGGAAGGCTTCCATTTCCATTGAAAACAAATCCA...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp TGTTTTCAATGGAAATGGAAGCCTTCCAAATATTATGCAGAACACAATCTCAGTCTGAGCTCAGGAGATTaGTTAGCAGTCTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: CFQWKWKPSKYYAEHNLSLSSGD*LAVSPS
Trigger: AGAGGGAGAGACTGCTAACCAATCTCCTGAGCTCAG...ACTGAGATTGTGTTCTGCATAATATTTGGAAGGCTTCCATTTCCATTGAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR TCA 90 bp TGGGTTAAACAGAAGTTTAGCCCTATGCTACTTCTATGCTTCAATTACCTAGAATCCCACGAACACAAATaGCATCGTCTTTTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: WVKQKFSPMLLLCFNYLESHEHK*HRLLSL
Trigger: AAGGGACAAAAGACGATGTCATTTGTGTTCGTGGGA...TTCTAGGTAATTGAAGCATAGAAGTAGCATAGGGCTAAACTTCTGTTTAACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR TCA 90 bp AACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACATTTCCAACAAAGCATTaGTCTGGAAGTTCAGTAGAT +
Preference number: 4 (lower is better)
Translates to: NKHLVTHLSRTSCNPVVTFPTKH*SGSSVD
Trigger: ATCTACTGAACTTCCAGATCAATGCTTTGTTGGAAA...TGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp TGGGTTAAACAGAAGTTTAGCCCTATGCTACTTCTATGCTTCAATTACCTAGAACCGTCTGTACCTCTGTaGAAGGTCTCTAATAAACTC +
Preference number: 4 (lower is better)
Translates to: WVKQKFSPMLLLCFNYLEPSVPL*KVSNKL
Trigger: GAGTTTATTAGAGACCTTTCACAGAGGTACAGACGG...TTCTAGGTAATTGAAGCATAGAAGTAGCATAGGGCTAAACTTCTGTTTAACCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR GCA 90 bp ACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTCAATTTCTTCTTTGTaGTCCCTCTTCAAGTGTAAA +
Preference number: 4 (lower is better)
Translates to: TFSDTSFKNVLQPCGHKESISSL*SLFKCK
Trigger: TTTACACTTGAAGAGGGAGCACAAAGAAGAAATTGA...CTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTTCAATTTCTTCTTTGTaGTCCCTCTTCAAGTGTAAA +
Preference number: 4 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSSISSL*SLFKCK
Trigger: TTTACACTTGAAGAGGGAGCACAAAGAAGAAATTGA...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR GCA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGGATTTTCCTTTTTaGTTAAGTGATGAGGTGATG +
Preference number: 4 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSMDFPF*LSDEVM
Trigger: CATCACCTCATCACTTAAGCAAAAAGGAAAATCCAT...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp AGAATTGATCAAGAGATTCTCAGTTCTCAATATCAGGAAGAACTATGCCTGGAGTATCAGGAAGAACTATaGCTGGAGCATATGCTTCCA +
Preference number: 4 (lower is better)
Translates to: RIDQEILSSQYQEELCLEYQEEL*LEHMLP
Trigger: TGGAAGCATATGCTCCAGGCATAGTTCTTCCTGATA...CTCCAGGCATAGTTCTTCCTGATATTGAGAACTGAGAATCTCTTGATCAATTCT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR GCA 90 bp GAAATCATCTCAAGATTCAACTGCCAGTGTGTTCTCAATCACTGGAGTAATTTGTCCAGAGAGTTAGGTTaGTTTAAAGTTGGCCATGCA +
Preference number: 4 (lower is better)
Translates to: EIISRFNCQCVLNHWSNLSRELG*FKVGHA
Trigger: TGCATGGCCAACTTTAAAGCAACCTAACTCTCTGGA...CAAATTACTCCAGTGATTGAGAACACACTGGCAGTTGAATCTTGAGATGATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR GCA 90 bp CTACTGAACCACCCAACTTTGATCTGTTCATGTCTATCAATGAACAGGAATGGAATCTCAAGATTCAACTaGCAGTGTGTTCTCAATCAC +
Preference number: 4 (lower is better)
Translates to: LLNHPTLICSCLSMNRNGISRFN*QCVLNH
Trigger: GTGATTGAGAACACACTGGCAGTTGAATCTTGAGAT...TCCATTCCTGTTCATTGATAGACATGAACAGATCAAAGTTGGGTGGTTCAGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp GTTCCCTTAAATAGTTTTCCATTGTTCCTGCGGCTTAATGAGGGACTTCTTAAATTTCAAAGTAGACAGTaGAAGCAGCTCTTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: VPLNSFPLFLRLNEGLLKFQSRQ*KQLLSK
Trigger: CTTGCTCAAGAGCTGCTTCCACTGTCTACTTTGAAA...TTTAAGAAGTCCCTCATTAAGCCGCAGGAACAATGGAAAACTATTTAAGGGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CCA 90 bp CAGGTTTCCAGAGAGTTAGGTTGCTTTAAAGTTGGCCATGCATTAAATAAAGCTTTTCAAAGTAGACAGTaGAAGCAGCTCTTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: QVSRELGCFKVGHALNKAFQSRQ*KQLLSK
Trigger: CTTGCTCAAGAGCTGCTTCCACTGTCTACTTTGAAA...AGCTTTATTTAATGCATGGCCAACTTTAAAGCAACCTAACTCTCTGGAAACCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp AACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACATTCTTTGCATTTTGCTaGCCCAATGTCATCAAGTTT +
Preference number: 4 (lower is better)
Translates to: NKHLVTHLSRTSCNPVVTFFAFC*PNVIKF
Trigger: AAACTTGATGACATTGGGCCAGCAAAATGCAAAGAA...TGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp TGGGTTAAACAGAAGTTTAGCCCTATGCTACTTCTATGCTTCAATTACCTAGAAACTTCTCTTTGGGTTTaGCCAATGGGAATGACGATG +
Preference number: 4 (lower is better)
Translates to: WVKQKFSPMLLLCFNYLETSLWV*PMGMTM
Trigger: CATCGTCATTCCCATTGGCCAAACCCAAAGAGAAGT...TTCTAGGTAATTGAAGCATAGAAGTAGCATAGGGCTAAACTTCTGTTTAACCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR TCA 90 bp TGTTTTCAATGGAAATGGAAGCCTTCCAAATATTATGCAGAACACAATCTCAGTCAGAAAAGACAGATCTaGAGATTATGCACTGGGCAC +
Preference number: 4 (lower is better)
Translates to: CFQWKWKPSKYYAEHNLSQKRQI*RLCTGH
Trigger: GTGCCCAGTGCATAATCTTCAGATCTGTCTTTTCTG...ACTGAGATTGTGTTCTGCATAATATTTGGAAGGCTTCCATTTCCATTGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp TGTTTTCAATGGAAATGGAAGCCTTCCAAATATTATGCAGAACACAATCTCAGTCCAGTACATTGGCACTaGTCAATACAAGATCAAGGG +
Preference number: 4 (lower is better)
Translates to: CFQWKWKPSKYYAEHNLSPVHWH*SIQDQG
Trigger: CCCTTGATCTTGTATTGATCAGTGCCAATGTACTGG...ACTGAGATTGTGTTCTGCATAATATTTGGAAGGCTTCCATTTCCATTGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp AAACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACATTAGGATATGGTGCTaGTTTCATTACTGGATCTAT +
Preference number: 4 (lower is better)
Translates to: KQTFSDTSFKNVLQPCGHIRIWC*FHYWIY
Trigger: ATAGATCCAGTAATGAAAGCAGCACCATATCCTAAT...GTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp GTTCCCTTAAATAGTTTTCCATTGTTCCTGCGGCTTAATGAGGGACTTCTTAAATCTTGCTCATCCCATTaGTTGCAAACTCACAAGATA +
Preference number: 4 (lower is better)
Translates to: VPLNSFPLFLRLNEGLLKSCSSH*LQTHKI
Trigger: TATCTTGTGAGTTTGCAAGCAATGGGATGAGCAAGA...TTTAAGAAGTCCCTCATTAAGCCGCAGGAACAATGGAAAACTATTTAAGGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp AAACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACTCCTTACCCTTAGAATaGGTTTTAACTACTCTTTGT +
Preference number: 4 (lower is better)
Translates to: KQTFSDTSFKNVLQPCGHSLPLE*VLTTLC
Trigger: ACAAAGAGTAGTTAAAACGCATTCTAAGGGTAAGGA...GTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CCA 90 bp GAAATCATCTCAAGATTCAACTGCCAGTGTGTTCTCAATCACTGGAGTAATTTGTTCACGTCTAAACTATaGAATGCTTTCAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: EIISRFNCQCVLNHWSNLFTSKL*NAFSTA
Trigger: TGCTGTGCTGAAAGCATTCCATAGTTTAGACGTGAA...CAAATTACTCCAGTGATTGAGAACACACTGGCAGTTGAATCTTGAGATGATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp TGTTTTCAATGGAAATGGAAGCCTTCCAAATATTATGCAGAACACAATCTCAGTTTCGAGGACATTGACTaGAAGAAGAGCCAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: CFQWKWKPSKYYAEHNLSFEDID*KKSQVQ
Trigger: TTGGACTTGGCTCTTCTTCCAGTCAATGTCCTCGAA...ACTGAGATTGTGTTCTGCATAATATTTGGAAGGCTTCCATTTCCATTGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp GAAAGACACCATCATCAACATAAGGATTCAAAAGGCAACTGTTGGGCAGTAGGAATTGATCCGTTCTTTTaGTTGTCTTCAGAGTTAAGT +
Preference number: 4 (lower is better)
Translates to: ERHHHQHKDSKGNCWAVGIDPFF*LSSELS
Trigger: ACTTAACTCTGAAGACAACCAAAAGAACGGATCAAT...TCCTACTGCCCAACAGTTGCCTTTTGAATCCTTATGTTGATGATGGTGTCTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp AAACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACATTGATCCGTTCTTTTaGTTGTCTTCAGAGTTAAGT +
Preference number: 4 (lower is better)
Translates to: KQTFSDTSFKNVLQPCGHIDPFF*LSSELS
Trigger: ACTTAACTCTGAAGACAACCAAAAGAACGGATCAAT...GTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp TGTTTTCAATGGAAATGGAAGCCTTCCAAATATTATGCAGAACACAATCTCAGTATTCACACACTGACTTaGCGCAATTTGCTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: CFQWKWKPSKYYAEHNLSIHTLT*RNLLCC
Trigger: ACAGCACAGCAAATTGCGCCAAGTCAGTGTGTGAAT...ACTGAGATTGTGTTCTGCATAATATTTGGAAGGCTTCCATTTCCATTGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp GTTCCCTTAAATAGTTTTCCATTGTTCCTGCGGCTTAATGAGGGACTTCTTAAAAACAAAGCATTGATCTaGAAGTTCAGTAGATTGCCC +
Preference number: 4 (lower is better)
Translates to: VPLNSFPLFLRLNEGLLKNKALI*KFSRLP
Trigger: GGGCAATCTACTGAACTTCCAGATCAATGCTTTGTT...TTTAAGAAGTCCCTCATTAAGCCGCAGGAACAATGGAAAACTATTTAAGGGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp TTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATATTAAGATAATGCATTaGCAGCTCACACTATACATG +
Preference number: 4 (lower is better)
Translates to: FSDTSFKNVLQPCGHKEYIKIMH*QLTLYM
Trigger: CATGTATAGTGTGAGCTGCCAATGCATTATCTTAAT...ATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp GTTCCCTTAAATAGTTTTCCATTGTTCCTGCGGCTTAATGAGGGACTTCTTAAAATTGTGAAACCAAAATaGAGTGCCTCTAATAAGGTG +
Preference number: 4 (lower is better)
Translates to: VPLNSFPLFLRLNEGLLKIVKPK*SASNKV
Trigger: CACCTTATTAGAGGCACTGCATTTTGGTTTCACAAT...TTTAAGAAGTCCCTCATTAAGCCGCAGGAACAATGGAAAACTATTTAAGGGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp ATTATGGAAAAACCTACTGAACCACCCAACTTTGATCTGTTCATGTCTATCAATCATCCTGCTGAGATGTaGGATTCACGTCTAAACTAT +
Preference number: 4 (lower is better)
Translates to: IMEKPTEPPNFDLFMSINHPAEM*DSRLNY
Trigger: ATAGTTTAGACGTGAATCCCACATCTCAGCAGGATG...ATTGATAGACATGAACAGATCAAAGTTGGGTGGTTCAGTAGGTTTTTCCATAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CCA 90 bp TGTTTTCAATGGAAATGGAAGCCTTCCAAATATTATGCAGAACACAATCTCAGTACCAGCTCATCCTCTTaGGCTCTGTTTTCATATAAG +
Preference number: 4 (lower is better)
Translates to: CFQWKWKPSKYYAEHNLSTSSSS*ALFSYK
Trigger: CTTATATGAAAACAGAGCCCAAGAGGATGAGCTGGT...ACTGAGATTGTGTTCTGCATAATATTTGGAAGGCTTCCATTTCCATTGAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR TCA 90 bp TGTTTTCAATGGAAATGGAAGCCTTCCAAATATTATGCAGAACACAATCTCAGTTTGCTAATGTGTGCCTaGAATCTGATTTCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: CFQWKWKPSKYYAEHNLSLLMCA*NLISFL
Trigger: CAAGAAGGAAATCAGATTTCAGGCACACATTAGCAA...ACTGAGATTGTGTTCTGCATAATATTTGGAAGGCTTCCATTTCCATTGAAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp GTTCCCTTAAATAGTTTTCCATTGTTCCTGCGGCTTAATGAGGGACTTCTTAAAATGGATTTTCCTTTTTaGTTAAGTGATGAGGTGATG +
Preference number: 4 (lower is better)
Translates to: VPLNSFPLFLRLNEGLLKMDFPF*LSDEVM
Trigger: CATCACCTCATCACTTAAGCAAAAAGGAAAATCCAT...TTTAAGAAGTCCCTCATTAAGCCGCAGGAACAATGGAAAACTATTTAAGGGAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp GTTCCCTTAAATAGTTTTCCATTGTTCCTGCGGCTTAATGAGGGACTTCTTAAACTTTTAGTCCCTTACTaGGAAGAGCAGTATAATTTT +
Preference number: 4 (lower is better)
Translates to: VPLNSFPLFLRLNEGLLKLLVPY*EEQYNF
Trigger: AAAATTATACTGCTCTTCCCAGTAAGGGACTAAAAG...TTTAAGAAGTCCCTCATTAAGCCGCAGGAACAATGGAAAACTATTTAAGGGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR GCA 90 bp TGTTTTCAATGGAAATGGAAGCCTTCCAAATATTATGCAGAACACAATCTCAGTAGACAGTTAGCCAGCTaGCATTTTAATATCTTCATG +
Preference number: 4 (lower is better)
Translates to: CFQWKWKPSKYYAEHNLSRQLAS*HFNIFM
Trigger: CATGAAGATATTAAAATGGCAGCTGGCTAACTGTCT...ACTGAGATTGTGTTCTGCATAATATTTGGAAGGCTTCCATTTCCATTGAAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp TGGGTTAAACAGAAGTTTAGCCCTATGCTACTTCTATGCTTCAATTACCTAGAAAAAGTTAAGTGCGTTTaGACTAAACAAAGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: WVKQKFSPMLLLCFNYLEKVKCV*TKQSKR
Trigger: CCTTTTGCTTTGTTTAGTCCAAACGCACTTAACTTT...TTCTAGGTAATTGAAGCATAGAAGTAGCATAGGGCTAAACTTCTGTTTAACCCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558197.1
3UTR CAA 72 bp CACTTCTATACTAATAACAGTTTCCAGGCAGCTGGATaGTTTCTCTCTATAGCTGGAAAATGGAAATATATC +
Preference number: 4 (lower is better)
Translates to: HFYTNNSFQAAG*FLSIAGKWKYI
Trigger: GATATATTTCCATTTTCCAGCTATAGAGAGAAACAATCCAGCTGCCTGGAAACTGTTATTAGTATAGAAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CCA 90 bp TGTTTTCAATGGAAATGGAAGCCTTCCAAATATTATGCAGAACACAATCTCAGTCAGATATTTAATATTTaGATCAGATATGTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: CFQWKWKPSKYYAEHNLSQIFNI*IRYVGG
Trigger: CCCTCCCACATATCTGATCCAAATATTAAATATCTG...ACTGAGATTGTGTTCTGCATAATATTTGGAAGGCTTCCATTTCCATTGAAAACA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS TCA 90 bp CCTGCCGCCTGGAGCCATGAGCCCCAGCCTCAGCTCCCGGGAGGGTaGGCAAGTCGGCTTTGGGTACAAACTCAGCGTGGGCTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: PAAWSHEPQPQLPGG*ASRLWVQTQRGLLG
Trigger: GCCCAGCAGCCCACGCTGAGTTTGTACCCAAAGCCGACTTGCTCACCCTCCCGGGAGCTGAGGCTGGGGCTCATGGCTCCAGGCGGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS TCA 90 bp CCAATACTCGGGAGGCTGGTCCCGAGTCCCAGCTACTCGGGAGGCTaGGGCAGGAGGATTGCTTACGGCAACAGCCGTGGCGGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: PILGRLVPSPSYSGG*GRRIAYGNSRGGCS
Trigger: GCTGCAGCCGCCACGGCTGTTGCCGTAAGCAATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTCGGGACCAGCCTCCCGAGTATTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000616417.5
ENST00000674090.1
CDS GCA 90 bp CTGATGCTCCAGCCCGCTCGGCGGCCTCCGAATGCCATCCCCTCCTaGCTCTGTGGAGCTGCAGTCAGGGGGCAGCACTTCTCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: LMLQPARRPPNAIPS*LCGAAVRGQHFSSK
Trigger: CTTGGAAGAGAAGTGCTGCCCCCTGACTGCAGCTCCACAGAGGCAGGAGGGGATGGCATTCGGAGGCCGCCGAGCGGGCTGGAGCATCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS GCA 90 bp CCGTGGGTGCTCCTCTTATTGAGAGGGCCCACGGGGAGCTCTCCCTaGCAGTCACCAGCACTCTGGAAACAGTCATCCTCGGGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: PWVLLLLRGPTGSSP*QSPALWKQSSSGAR
Trigger: CCTGGCCCCCGAGGATGACTGTTTCCAGAGTGCTGGTGACTGGCAGGGAGAGCTCCCCGTGGGCCCTCTCAATAAGAGGAGCACCCACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CCA 90 bp TTGAGAGGGCCCACGGGGAGCTCTCCCTGCCAGTCACCAGCACTCTaGAAACAGTCATCCTCGGGGGCCAGGCTCACGGACAGCTCTTGC +
Preference number: 5 (lower is better)
Translates to: LRGPTGSSPCQSPAL*KQSSSGARLTDSSC
Trigger: GCAAGAGCTGTCCGTGAGCCTGGCCCCCGAGGATGACTGTTTCCAGAGTGCTGGTGACTGGCAGGGAGAGCTCCCCGTGGGCCCTCTCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CCA 90 bp CTACTCGGGAGGCTGAGGCAGGAGGATTGCTTACGGCAACAGCCGTaGCGGCTGCAGCCTCGAAGGATGCTGCGCTCCAGTCCAGAGCCA +
Preference number: 5 (lower is better)
Translates to: LLGRLRQEDCLRQQP*RLQPRRMLRSSPEP
Trigger: TGGCTCTGGACTGGAGCGCAGCATCCTTCGAGGCTGCAGCCGCCACGGCTGTTGCCGTAAGCAATCCTCCTGCCTCAGCCTCCCGAGTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS TCA 90 bp CGACACACTAGAAATGGAGGCTGTTTCCCCGGCTGGCGACTGCGATaGCCTATCCCCTTGCCGCTCCTTGCCCTGCCGCCTGGAGCCATG +
Preference number: 5 (lower is better)
Translates to: RHTRNGGCFPGWRLR*PIPLPLLALPPGAM
Trigger: CATGGCTCCAGGCGGCAGGGCAAGGAGCGGCAAGGGGATAGGTCATCGCAGTCGCCAGCCGGGGAAACAGCCTCCATTTCTAGTGTGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CCA 90 bp GCCTCCAGGGCTGTCTCTGGCGACTTTGGCTTGACCTCACCACCCTaGGTTTGTGGTACTCCAGGGCCGCTCTGGCTCTCTTGGTCAGCA +
Preference number: 5 (lower is better)
Translates to: ASRAVSGDFGLTSPP*VCGTPGPLWLSWSA
Trigger: TGCTGACCAAGAGAGCCAGAGCGGCCCTGGAGTACCACAAACCCAGGGTGGTGAGGTCAAGCCAAAGTCGCCAGAGACAGCCCTGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS CCA 90 bp CAGGCAATGCAGGGAGCCGGAGGATCCTGTGATGCTGCTGAGGGCTaGGGAGCCTTGGAGACAGAGGCGAGGGAACAGGTGACGTCTGTT +
Preference number: 5 (lower is better)
Translates to: QAMQGAGGSCDAAEG*GALETEAREQVTSV
Trigger: AACAGACGTCACCTGTTCCCTCGCCTCTGTCTCCAAGGCTCCCCAGCCCTCAGCAGCATCACAGGATCCTCCGGCTCCCTGCATTGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp CAGCCTGGCATGTCACTATGGACCGGCGGCACCTCCCTGCTGAGGGCTGCGGGTCTGTGTCTTTTGTCTTaGGGGGTGGCCAGACAGCTT +
Preference number: 5 (lower is better)
Translates to: QPGMSLWTGGTSLLRAAGLCLLS*GVARQL
Trigger: AAGCTGTCTGGCCACCCCCAAAGACAAAAGACACAG...ACCCGCAGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACATGCCAGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CAA 90 bp CAGCCTGGCATGTCACTATGGACCGGCGGCACCTCCCTGCTGAGGGCTGCGGGTCTTGCCCCTTCAGGCTaGGGTGTGGTAAAAGCTTCT +
Preference number: 5 (lower is better)
Translates to: QPGMSLWTGGTSLLRAAGLAPSG*GVVKAS
Trigger: AGAAGCTTTTACCACACCCAAGCCTGAAGGGGCAAG...ACCCGCAGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACATGCCAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS GCA 90 bp TGCTCTGAGGAAGGCCGGGCTGGCTCCTTTGGTCTCCGTGACCTTTaGAGAGGATGGTGGCTCCAAGGTGTCAGCAGAGACGCACCCAGA +
Preference number: 5 (lower is better)
Translates to: CSEEGRAGSFGLRDL*RGWWLQGVSRDAPR
Trigger: TCTGGGTGCGTCTCTGCTGACACCTTGGAGCCACCATCCTCTGCAAAGGTCACGGAGACCAAAGGAGCCAGCCCGGCCTTCCTCAGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CCA 90 bp GGCTTGACCTCACCACCCTGGGTTTGTGGTACTCCAGGGCCGCTCTaGCTCTCTTGGTCAGCATTGCAGCCCATCTCTTCTCTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: GLTSPPWVCGTPGPL*LSWSALQPISSLLG
Trigger: GCCCAGGAGAGAAGAGATGGGCTGCAATGCTGACCAAGAGAGCCAGAGCGGCCCTGGAGTACCACAAACCCAGGGTGGTGAGGTCAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS CCA 90 bp GTGGCCACCAAGGGGCAACCCGGCTCTCCTCTTGTTTCTCGTTTCTaGGCGAGTGTGAGGGACACTCGTGTGGACAGGGAAGCCCAGTCT +
Preference number: 5 (lower is better)
Translates to: VATKGQPGSPLVSRF*ASVRDTRVDREAQS
Trigger: AGACTGGGCTTCCCTGTCCACACGAGTGTCCCTCACACTCGCCCAGAAACGAGAAACAAGAGGAGAGCCGGGTTGCCCCTTGGTGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp ATGTCACTATGGACCGGCGGCACCTCCCTGCTGAGGGCTGCGGGTCCTGCCCAGACAGGCTGCGTCAATTaGAGCAAAGCTAAGTCCCCA +
Preference number: 5 (lower is better)
Translates to: MSLWTGGTSLLRAAGPAQTGCVN*SKAKSP
Trigger: TGGGGACTTAGCTTTGCTCAAATTGACGCAGCCTGT...CTGGGCAGGACCCGCAGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CAA 90 bp CAGCCTGGCATGTCACTATGGACCGGCGGCACCTCCCTGCTGAGGGCTGCGGGTTGCCAGCTCACAAAATaGTATGAGGACCAACCACCG +
Preference number: 5 (lower is better)
Translates to: QPGMSLWTGGTSLLRAAGCQLTK*YEDQPP
Trigger: CGGTGGTTGGTCCTCATACAATTTTGTGAGCTGGCA...ACCCGCAGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACATGCCAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS TCA 90 bp GACCCTTCTTCTCCCACCTGGTCCTGGCTGGGGCGACGCTCTGTCTaGAGACCACCGTTGCCAGCTTCCAGTTTGCTGCTCATCTCAGGT +
Preference number: 5 (lower is better)
Translates to: DPSSPTWSWLGRRSV*RPPLPASSLLLISG
Trigger: ACCTGAGATGAGCAGCAAACTGGAAGCTGGCAACGGTGGTCTTCAGACAGAGCGTCGCCCCAGCCAGGACCAGGTGGGAGAAGAAGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS CCA 90 bp AAAGCTCCCAAAGCCAAGGTCTGTGTCTGGCGTCTTGGGAATATCTaGGGGGCAGCTCTCTCTCCTCTGCAGGGAGCAGGCAAGTGCCCC +
Preference number: 5 (lower is better)
Translates to: KAPKAKVCVWRLGNI*GAALSPLQGAGKCP
Trigger: GGGGCACTTGCCTGCTCCCTGCAGAGGAGAGAGAGCTGCCCCCCAGATATTCCCAAGACGCCAGACACAGACCTTGGCTTTGGGAGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp CGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCACTGCCGCTGGGTCTCTaGTCCAAGCACACCCAAGGC +
Preference number: 5 (lower is better)
Translates to: RPATLWSQRVCVQGPPPPLPLGL*SKHTQG
Trigger: GCCTTGGGTGTGCTTGGACAAGAGACCCAGCGGCAG...TGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp CGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCATGGGTGCTCCTCTTATaGAGAGGGCCCACGGGGAGC +
Preference number: 5 (lower is better)
Translates to: RPATLWSQRVCVQGPPPPWVLLL*RGPTGS
Trigger: GCTCCCCGTGGGCCCTCTCAATAAGAGGAGCACCCA...TGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp CTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCGCCGGGCTGGCTCCTTaGGTCTCCGTGACCTTTGCA +
Preference number: 5 (lower is better)
Translates to: LQPCGHKEYACKVLHLQCAGLAP*VSVTFA
Trigger: TGCAAAGGTCACGGAGACCAAAGGAGCCAGCCCGGC...GCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp CTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCAGGCACCAACCGAGGTaGGCCTGCTCTGAGGAAGGC +
Preference number: 5 (lower is better)
Translates to: LQPCGHKEYACKVLHLQCRHQPR*ACSEEG
Trigger: GCCTTCCTCAGAGCAGGCCAACCTCGGTTGGTGCCT...GCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp CAGCCTGGCATGTCACTATGGACCGGCGGCACCTCCCTGCTGAGGGCTGCGGGTGTCTCAGTAATGCCCTaGGTGGAAGTTCTGACTTGT +
Preference number: 5 (lower is better)
Translates to: QPGMSLWTGGTSLLRAAGVSVMP*VEVLTC
Trigger: ACAAGTCAGAACTTCCACCAAGGGCATTACTGAGAC...ACCCGCAGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACATGCCAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS GCA 90 bp CCACCTGGTCCTGGCTGGGGCGACGCTCTGTCTGAAGACCACCGTTaGCAGCTTCCAGTTTGCTGCTCATCTCAGGTGGAATCCTTTGAG +
Preference number: 5 (lower is better)
Translates to: PPGPGWGDALSEDHR*QLPVCCSSQVESFE
Trigger: CTCAAAGGATTCCACCTGAGATGAGCAGCAAACTGGAAGCTGGCAACGGTGGTCTTCAGACAGAGCGTCGCCCCAGCCAGGACCAGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS GCA 90 bp CAAGCTCTTTTCCAAAGTTTCCCCAGGCACCAACCGAGGTTGGCCTaGTCTGAGGAAGGCCGGGCTGGCTCCTTTGGTCTCCGTGACCTT +
Preference number: 5 (lower is better)
Translates to: QALFQSFPRHQPRLA*SEEGRAGSFGLRDL
Trigger: AAGGTCACGGAGACCAAAGGAGCCAGCCCGGCCTTCCTCAGAGCAGGCCAACCTCGGTTGGTGCCTGGGGAAACTTTGGAAAAGAGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CCA 90 bp CTAGGGGACTTTGGGCCATTGGTGCTGCTTCCCTCCTCTGGCTCCTaGCCACCATCATCAGAGTCAGAATCACTGGTGGTGTGCACCAGG +
Preference number: 5 (lower is better)
Translates to: LGDFGPLVLLPSSGS*PPSSESESLVVCTR
Trigger: CCTGGTGCACACCACCAGTGATTCTGACTCTGATGATGGTGGCCAGGAGCCAGAGGAGGGAAGCAGCACCAATGGCCCAAAGTCCCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS CCA 90 bp AAGCTCTCTCTCCTTCCACTAGACCTCCGAGGCTTTTTGTTCCCGTaGGTGCTCCTCTTATTGAGAGGGCCCACGGGGAGCTCTCCCTGC +
Preference number: 5 (lower is better)
Translates to: KLSLLPLDLRGFLFP*VLLLLRGPTGSSPC
Trigger: GCAGGGAGAGCTCCCCGTGGGCCCTCTCAATAAGAGGAGCACCCACGGGAACAAAAAGCCTCGGAGGTCTAGTGGAAGGAGAGAGAGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CCA 90 bp GCTCCCGGGAGGGTGAGCAAGTCGGCTTTGGGTACAAACTCAGCGTaGGCTGCTGGGCGAATGGCAATCGTCTCCTTACCCTTAGAATGC +
Preference number: 5 (lower is better)
Translates to: APGRVSKSALGTNSA*AAGRMAIVSLPLEC
Trigger: GCATTCTAAGGGTAAGGAGACGATTGCCATTCGCCCAGCAGCCCACGCTGAGTTTGTACCCAAAGCCGACTTGCTCACCCTCCCGGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp CAGCCTGGCATGTCACTATGGACCGGCGGCACCTCCCTGCTGAGGGCTGCGGGTACTGCTGTGTCTGAATaGCTCTGCTCAGATGAAACA +
Preference number: 5 (lower is better)
Translates to: QPGMSLWTGGTSLLRAAGTAVSE*LCSDET
Trigger: TGTTTCATCTGAGCAGAGCAATTCAGACACAGCAGT...ACCCGCAGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACATGCCAGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS TCA 90 bp AGCTGCAGTCAGGGGGCAGCACTTCTCTTCCAAGCCCAGTGTCCTTaGAAGCCGTCTCAAAGCTCCCAAAGCCAAGGTCTGTGTCTGGCG +
Preference number: 5 (lower is better)
Translates to: SCSQGAALLFQAQCP*KPSQSSQSQGLCLA
Trigger: CGCCAGACACAGACCTTGGCTTTGGGAGCTTTGAGACGGCTTTCAAGGACACTGGGCTTGGAAGAGAAGTGCTGCCCCCTGACTGCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS GCA 90 bp TCTACAAGGAGAGTCATTAAGAGCAGCTTCCCTCTCACCAGGCAATaGAGGGAGCCGGAGGATCCTGTGATGCTGCTGAGGGCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: STRRVIKSSFPLTRQ*REPEDPVMLLRAGE
Trigger: CTCCCCAGCCCTCAGCAGCATCACAGGATCCTCCGGCTCCCTGCATTGCCTGGTGAGAGGGAAGCTGCTCTTAATGACTCTCCTTGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp GCCCAGCAGCTGCCTCCACACCACTCAGCCTCCCTCTTAAGTTCTAGTTTTCGAGGGTGGCCAGACAGCTaGAAGTCTGCCAGGAGTCCT +
Preference number: 5 (lower is better)
Translates to: AQQLPPHHSASLLSSSFRGWPDS*KSARSP
Trigger: AGGACTCCTGGCAGACTTCAAGCTGTCTGGCCACCC...TCGAAAACTAGAACTTAAGAGGGAGGCTGAGTGGTGTGGAGGCAGCTGCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CAA 90 bp CGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCACACTCACAGGTGGCATaGGAGGTGCGGGAGACAAAG +
Preference number: 5 (lower is better)
Translates to: RPATLWSQRVCVQGPPPPHSQVA*EVRETK
Trigger: CTTTGTCTCCCGCACCTCCAATGCCACCTGTGAGTG...TGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp AAAGGTAGCTGGAAGCAGGAAACTTCTCCCTGTATGGGCTTCCCAGCTGCAGGGGACCTCCGAGGCTTTTaGTTCCCGTGGGTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: KGSWKQETSPCMGFPAAGDLRGF*FPWVLL
Trigger: GAGGAGCACCCACGGGAACAAAAAGCCTCGGAGGTC...CCCTGCAGCTGGGAAGCCCATACAGGGAGAAGTTTCCTGCTTCCAGCTACCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CAA 90 bp GGCAGGATGTGCTTAAGCTGCCAAATGGCATCCCGATCACCTCCTCTCCAGGAAGACCTCCGAGGCTTTTaGTTCCCGTGGGTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: GRMCLSCQMASRSPPLQEDLRGF*FPWVLL
Trigger: GAGGAGCACCCACGGGAACAAAAAGCCTCGGAGGTC...TTCCTGGAGAGGAGGTGATCGGGATGCCATTTGGCAGCTTAAGCACATCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR CAA 90 bp CTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCACCTTCAGGGGGACCTaGTTCACGGCCCCCTCGGCA +
Preference number: 5 (lower is better)
Translates to: LSRTSCNPVVTKSMRARSTFRGT*FTAPSA
Trigger: TGCCGAGGGGGCCGTGAACAAGGTCCCCCTGAAGGT...GGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS TCA 90 bp ACTCAGGGTCTGCTCCCTTCGGTTCAGTTTTGGGCATGTCAATGTTaGGCAGCAGAGAGAGCTGCTCCAGGAGAGTGGGAGTGGCCTTCG +
Preference number: 5 (lower is better)
Translates to: TQGLLPSVQFWACQC*AAERAAPGEWEWPS
Trigger: CGAAGGCCACTCCCACTCTCCTGGAGCAGCTCTCTCTGCTGCTCAACATTGACATGCCCAAAACTGAACCGAAGGGAGCAGACCCTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS GCA 90 bp GTTGACCCAGACTCCAAGTGGGCTTTCCAGAGATGCAATGTGACTTaGTTGCCCTTCCCCTGCACCAAGGGGTCACCGTCTCTGTGTCTC +
Preference number: 5 (lower is better)
Translates to: VDPDSKWAFQRCNVT*LPFPCTKGSPSLCL
Trigger: GAGACACAGAGACGGTGACCCCTTGGTGCAGGGGAAGGGCAAGCAAGTCACATTGCATCTCTGGAAAGCCCACTTGGAGTCTGGGTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558882.1
CDS-3UTR CAA 90 bp CCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATATGCCATGCCCTCCATaGGCTGGAGTGCTGCATGGA +
Preference number: 5 (lower is better)
Translates to: PCGHKEYACKVLHLQCHHMPCPP*AGVLHG
Trigger: TCCATGCAGCACTCCAGCCAATGGAGGGCATGGCAT...ATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCGCTCACGGACAGCTCTaGCAGCTTCCCCTCCTGGTT +
Preference number: 5 (lower is better)
Translates to: VVTKSMRARSSTSSAIISAHGQL*QLPLLV
Trigger: AACCAGGAGGGGAAGCTGCAAGAGCTGTCCGTGAGC...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp GCTGGCAACTCTCTGAGCCCTCTTCTGGGTTTAGGTGGGAAGAGAAATGAAGTGTGGGTGCTCCTCTTATaGAGAGGGCCCACGGGGAGC +
Preference number: 5 (lower is better)
Translates to: AGNSLSPLLGLGGKRNEVWVLLL*RGPTGS
Trigger: GCTCCCCGTGGGCCCTCTCAATAAGAGGAGCACCCA...CACTTCATTTCTCTTCCCACCTAAACCCAGAAGAGGGCTCAGAGAGTTGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CAA 90 bp CGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGAGCAAGTCGGCTTaGGGTACAAACTCAGCGTGG +
Preference number: 5 (lower is better)
Translates to: RPATLWSQRVCVQGPPPPVSKSA*GTNSAW
Trigger: CCACGCTGAGTTTGTACCCAAAGCCGACTTGCTCAC...TGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp GCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCAACAGGTGACGTCTGTTaGTGTGTGCTGGACTGCGAG +
Preference number: 5 (lower is better)
Translates to: ATLWSQRVCVQGPPPPVPTGDVC*CVLDCE
Trigger: CTCGCAGTCCAGCACACACAAACAGACGTCACCTGT...TGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp GGAGGAGGGGCCAAGGGAGCTACTCAGTTGTCTATGATGCAGAGGTGTGAAAAAGCCGGGCTGGCTCCTTaGGTCTCCGTGACCTTTGCA +
Preference number: 5 (lower is better)
Translates to: GGGAKGATQLSMMQRCEKAGLAP*VSVTFA
Trigger: TGCAAAGGTCACGGAGACCAAAGGAGCCAGCCCGGC...TTTTTCACACCTCTGCATCATAGACAACTGAGTAGCTCCCTTGGCCCCTCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR CAA 90 bp ATGTCACTATGGACCGGCGGCACCTCCCTGCTGAGGGCTGCGGGTCCTGCCCAGCCATCCTCTAATGCTTaGGTGTCATTTTACAGTTCA +
Preference number: 5 (lower is better)
Translates to: MSLWTGGTSLLRAAGPAQPSSNA*VSFYSS
Trigger: TGAACTGTAAAATGACACCAAAGCATTAGAGGATGG...CTGGGCAGGACCCGCAGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS TCA 90 bp GCAATGTTGACCCAGACTCCAAGTGGGCTTTCCAGAGATGCAATGTaGCTTGCTTGCCCTTCCCCTGCACCAAGGGGTCACCGTCTCTGT +
Preference number: 5 (lower is better)
Translates to: AMLTQTPSGLSRDAM*LACPSPAPRGHRLC
Trigger: ACAGAGACGGTGACCCCTTGGTGCAGGGGAAGGGCAAGCAAGTCACATTGCATCTCTGGAAAGCCCACTTGGAGTCTGGGTCAACATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558882.1
CDS TCA 90 bp TGGGGTTACCGACCTCCTGTGCCGGCACTTCCAAATCCTGGGAACTaGAATGGACTGTCCATATCTTGGGCTACAGTGGTAGCAGGCACC +
Preference number: 5 (lower is better)
Translates to: WGYRPPVPALPNPGN*NGLSISWATVVAGT
Trigger: GGTGCCTGCTACCACTGTAGCCCAAGATATGGACAGTCCATTTCAGTTCCCAGGATTTGGAAGTGCCGGCACAGGAGGTCGGTAACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672206.1
CDS GCA 90 bp GTCAGCATTGCAGCCCATCTCTTCTCTCCTGGGCGACTCAGGGTCTaGTCCCTTCGGTTCAGTTTTGGGCATGTCAATGTTGAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: VSIAAHLFSPGRLRV*SLRFSFGHVNVEQQ
Trigger: CTGCTGCTCAACATTGACATGCCCAAAACTGAACCGAAGGGAGCAGACCCTGAGTCGCCCAGGAGAGAAGAGATGGGCTGCAATGCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS GCA 90 bp TGGATGCGGGAGGCGGAGGCAATGCCTTCTGCTGATTTGATGCCATaGCCTCCATTGGCTGGAGTGCTGCATGGATGTCTTTGTGGTCAT +
Preference number: 5 (lower is better)
Translates to: WMREAEAMPSADLMP*PPLAGVLHGCLCGH
Trigger: ATGACCACAAAGACATCCATGCAGCACTCCAGCCAATGGAGGGCATGGCATCAAATCAGCAGAAGGCATTGCCTCCGCCTCCCGCATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
ENST00000672206.1
CDS GCA 90 bp CGGGAGGGTGAGCAAGTCGGCTTTGGGTACAAACTCAGCGTGGGCTaGTGGGCGAATGGCAATCGTCTCCTTACCCTTAGAATGCGTTTT +
Preference number: 5 (lower is better)
Translates to: REGEQVGFGYKLSVG*WANGNRLLTLRMRF
Trigger: AAAACGCATTCTAAGGGTAAGGAGACGATTGCCATTCGCCCAGCAGCCCACGCTGAGTTTGTACCCAAAGCCGACTTGCTCACCCTCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS GCA 90 bp CTGTCAGCCGCACAGCAAACACACTTGGTCTCTTTCGGGTCACAGTaGCCTCCTTCCGGTTTGTGCGATGATGTGTTCCAGGGCAACTGT +
Preference number: 5 (lower is better)
Translates to: LSAAQQTHLVSFGSQ*PPSGLCDDVFQGNC
Trigger: ACAGTTGCCCTGGAACACATCATCGCACAAACCGGAAGGAGGGCACTGTGACCCGAAAGAGACCAAGTGTGTTTGCTGTGCGGCTGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS GCA 90 bp AGAACCCACGCGCCTCCATCTCTGTTGGGAAGGTCTTTAGGTGTCTaGTCATTGAAGCCGTCCCAGGGAAAGCCCTCAGAGGAGATACCT +
Preference number: 5 (lower is better)
Translates to: RTHAPPSLLGRSLGV*SLKPSQGKPSEEIP
Trigger: AGGTATCTCCTCTGAGGGCTTTCCCTGGGACGGCTTCAATGAGCAGACACCTAAAGACCTTCCCAACAGAGATGGAGGCGCGTGGGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000616417.5
ENST00000672206.1
ENST00000674090.1
CDS CCA 90 bp GTGATACCAACACTCGAATTCTGGTTTGTTACTGCAGGTAGGTCTTaGGACCCTTCTTCTCCCACCTGGTCCTGGCTGGGGCGACGCTCT +
Preference number: 5 (lower is better)
Translates to: VIPTLEFWFVTAGRS*DPSSPTWSWLGRRS
Trigger: AGAGCGTCGCCCCAGCCAGGACCAGGTGGGAGAAGAAGGGTCCCAAGACCTACCTGCAGTAACAAACCAGAATTCGAGTGTTGGTATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS CCA 90 bp TCATGGGACAACTGGGCTCGATGGCTGGTTTTCGAGGACATTGACTaGAAGAAGAGCCAAGTCCAAAGAAGAGTCCAGGGGGAGGTGGGG +
Preference number: 5 (lower is better)
Translates to: SWDNWARWLVFEDID*KKSQVQRRVQGEVG
Trigger: CCCCACCTCCCCCTGGACTCTTCTTTGGACTTGGCTCTTCTTCCAGTCAATGTCCTCGAAAACCAGCCATCGAGCCCAGTTGTCCCATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
ENST00000672206.1
CDS-3UTR CAA 90 bp CCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATCAGTGGAAGCAGCTCTaGAGCAAGGAGAGATGTCCC +
Preference number: 5 (lower is better)
Translates to: PCGHKEYACKVLHLQCHHQWKQL*SKERCP
Trigger: GGGACATCTCTCCTTGCTCAAGAGCTGCTTCCACTG...ATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CAA 90 bp CTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCGGGTGGCCAGACAGCTaGAAGTCTGCCAGGAGTCCT +
Preference number: 5 (lower is better)
Translates to: LSRTSCNPVVTKSMRARSGWPDS*KSARSP
Trigger: AGGACTCCTGGCAGACTTCAAGCTGTCTGGCCACCC...GGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp CAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATGCTGGAGATACTCCTTaGGGGACTCCTTGCACACCA +
Preference number: 5 (lower is better)
Translates to: QPCGHKEYACKVLHLQCHAGDTP*GTPCTP
Trigger: TGGTGTGCAAGGAGTCCCCAAAGGAGTATCTCCAGC...ATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp CTAGCACCAAGCTCCAAGGACACTGCTTTGCAGGCTAGCACAACTAGAGTTCCTCTTGGAGATGCCGGTTaGTGGTCAGGCTTCCCAGGC +
Preference number: 5 (lower is better)
Translates to: LAPSSKDTALQASTTRVPLGDAG*WSGFPG
Trigger: GCCTGGGAAGCCTGACCACAAACCGGCATCTCCAAG...AGGAACTCTAGTTGTGCTAGCCTGCAAAGCAGTGTCCTTGGAGCTTGGTGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CAA 90 bp GACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCTGGGTGCTCCTCTTATaGAGAGGGCCCACGGGGAGC +
Preference number: 5 (lower is better)
Translates to: DTSFKNVLQPCGHKEYACWVLLL*RGPTGS
Trigger: GCTCCCCGTGGGCCCTCTCAATAAGAGGAGCACCCA...GCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp AAAGGTAGCTGGAAGCAGGAAACTTCTCCCTGTATGGGCTTCCCAGCTGCAGGGCCAAGCCCAGTGTCCTaGAAAGCCGTCTCAAAGCTC +
Preference number: 5 (lower is better)
Translates to: KGSWKQETSPCMGFPAAGPSPVS*KAVSKL
Trigger: GAGCTTTGAGACGGCTTTCAAGGACACTGGGCTTGG...CCCTGCAGCTGGGAAGCCCATACAGGGAGAAGTTTCCTGCTTCCAGCTACCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CAA 90 bp CCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATCCAAGCCCAGTGTCCTaGAAAGCCGTCTCAAAGCTC +
Preference number: 5 (lower is better)
Translates to: PCGHKEYACKVLHLQCHHPSPVS*KAVSKL
Trigger: GAGCTTTGAGACGGCTTTCAAGGACACTGGGCTTGG...ATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp TTCCCAAGTATGGTGAGCCAAGCTCCCTGTGATTCTTCTGGCACTAAAAGGGTTACCTTCAGGGGGACCTaGTTCACGGCCCCCTCGGCA +
Preference number: 5 (lower is better)
Translates to: FPSMVSQAPCDSSGTKRVTFRGT*FTAPSA
Trigger: TGCCGAGGGGGCCGTGAACAAGGTCCCCCTGAAGGT...AACCCTTTTAGTGCCAGAAGAATCACAGGGAGCTTGGCTCACCATACTTGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CAA 90 bp CGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGAGTCAGGACCTACTTaGTGGGGCAGATCCAGAAAC +
Preference number: 5 (lower is better)
Translates to: RPATLWSQRVCVQGPPPPESGPT*WGRSRN
Trigger: GTTTCTGGATCTGCCCCACAAAGTAGGTCCTGACTC...TGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp GGGCATTTCCCAAGTATGGTGAGCCAAGCTCCCTGTGATTCTTCTGGCACTAAAGCCGGGCTGGCTCCTTaGGTCTCCGTGACCTTTGCA +
Preference number: 5 (lower is better)
Translates to: GHFPSMVSQAPCDSSGTKAGLAP*VSVTFA
Trigger: TGCAAAGGTCACGGAGACCAAAGGAGCCAGCCCGGC...TTTAGTGCCAGAAGAATCACAGGGAGCTTGGCTCACCATACTTGGGAAATGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CAA 90 bp AGTTCCCAGCCTGGCATGTCACTATGGACCGGCGGCACCTCCCTGCTGAGGGCTAACAGAAGCTTGTCTTaGTGCCCTTGTACTAAACTC +
Preference number: 5 (lower is better)
Translates to: SSQPGMSLWTGGTSLLRANRSLS*CPCTKL
Trigger: GAGTTTAGTACAAGGGCACAAAGACAAGCTTCTGTT...AGCCCTCAGCAGGGAGGTGCCGCCGGTCCATAGTGACATGCCAGGCTGGGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS TCA 90 bp GGCTTCATGGGACAACTGGGCTCGATGGCTGGTTTTCGAGGACATTaGCTGGAAGAAGAGCCAAGTCCAAAGAAGAGTCCAGGGGGAGGT +
Preference number: 5 (lower is better)
Translates to: GFMGQLGSMAGFRGH*LEEEPSPKKSPGGG
Trigger: ACCTCCCCCTGGACTCTTCTTTGGACTTGGCTCTTCTTCCAGTCAATGTCCTCGAAAACCAGCCATCGAGCCCAGTTGTCCCATGAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
ENST00000672206.1
CDS TCA 90 bp AAGGGAGTGGCTGGAACAGATCTTGTCCTTGCCCATCAGAGGAGCTaGTTCTCGGCCTCCACGCCCTTTTCTTTTGGTCCTCTTCTGTGG +
Preference number: 5 (lower is better)
Translates to: KGVAGTDLVLAHQRS*FSASTPFSFGPLLW
Trigger: CCACAGAAGAGGACCAAAAGAAAAGGGCGTGGAGGCCGAGAATCAGCTCCTCTGATGGGCAAGGACAAGATCTGTTCCAGCCACTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS GCA 90 bp GGCGACGCTCTGTCTGAAGACCACCGTTGCCAGCTTCCAGTTTGCTaGTCATCTCAGGTGGAATCCTTTGAGGATCTTCTGCACAGAGCT +
Preference number: 5 (lower is better)
Translates to: GDALSEDHRCQLPVC*SSQVESFEDLLHRA
Trigger: AGCTCTGTGCAGAAGATCCTCAAAGGATTCCACCTGAGATGAGCAGCAAACTGGAAGCTGGCAACGGTGGTCTTCAGACAGAGCGTCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS GCA 90 bp TGGGGCGACGCTCTGTCTGAAGACCACCGTTGCCAGCTTCCAGTTTaGTGCTCATCTCAGGTGGAATCCTTTGAGGATCTTCTGCACAGA +
Preference number: 5 (lower is better)
Translates to: WGDALSEDHRCQLPV*CSSQVESFEDLLHR
Trigger: TCTGTGCAGAAGATCCTCAAAGGATTCCACCTGAGATGAGCAGCAAACTGGAAGCTGGCAACGGTGGTCTTCAGACAGAGCGTCGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS GCA 90 bp GGAGTGGCCTTCGGATCAGTTGCTTTCTTCTCACTCTTCACTGTCTaGAGCCCTGCCTGCACTAAGGACTTCTGCACAGGCTGCGTCAAT +
Preference number: 5 (lower is better)
Translates to: GVAFGSVAFFSLFTV*SPACTKDFCTGCVN
Trigger: ATTGACGCAGCCTGTGCAGAAGTCCTTAGTGCAGGCAGGGCTGCAGACAGTGAAGAGTGAGAAGAAAGCAACTGATCCGAAGGCCACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS GCA 90 bp GACAGAGGCGAGGGAACAGGTGACGTCTGTTTGTGTGTGCTGGACTaGGAGGCTGAATTATTAAACACCTTGCCAAGAGCTGCCGGTGCT +
Preference number: 5 (lower is better)
Translates to: DRGEGTGDVCLCVLD*EAELLNTLPRAAGA
Trigger: AGCACCGGCAGCTCTTGGCAAGGTGTTTAATAATTCAGCCTCGCAGTCCAGCACACACAAACAGACGTCACCTGTTCCCTCGCCTCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CCA 90 bp GAGTCAGGACCTACTTTGTGGGGCAGATCCAGAAACAAGGACTTGTaGCCACCAAGGGGCAACCCGGCTCTCCTCTTGTTTCTCGTTTCT +
Preference number: 5 (lower is better)
Translates to: ESGPTLWGRSRNKDL*PPRGNPALLLFLVS
Trigger: AGAAACGAGAAACAAGAGGAGAGCCGGGTTGCCCCTTGGTGGCCACAAGTCCTTGTTTCTGGATCTGCCCCACAAAGTAGGTCCTGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CCA 90 bp TTACCGACCTCCTGTGCCGGCACTTCCAAATCCTGGGAACTGAAATaGACTGTCCATATCTTGGGCTACAGTGGTAGCAGGCACCCATGG +
Preference number: 5 (lower is better)
Translates to: LPTSCAGTSKSWELK*TVHILGYSGSRHPW
Trigger: CCATGGGTGCCTGCTACCACTGTAGCCCAAGATATGGACAGTCCATTTCAGTTCCCAGGATTTGGAAGTGCCGGCACAGGAGGTCGGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672206.1
CDS CCA 90 bp CTTCCTCTGGGGTTACCGACCTCCTGTGCCGGCACTTCCAAATCCTaGGAACTGAAATGGACTGTCCATATCTTGGGCTACAGTGGTAGC +
Preference number: 5 (lower is better)
Translates to: LPLGLPTSCAGTSKS*ELKWTVHILGYSGS
Trigger: GCTACCACTGTAGCCCAAGATATGGACAGTCCATTTCAGTTCCCAGGATTTGGAAGTGCCGGCACAGGAGGTCGGTAACCCCAGAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672206.1
CDS-3UTR CAA 90 bp CTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCTGGCGACTTTGGCTaGACCTCACCACCCTGGGTT +
Preference number: 5 (lower is better)
Translates to: LSRTSCNPVVTKSMRARSSGDFG*TSPPWV
Trigger: AACCCAGGGTGGTGAGGTCAAGCCAAAGTCGCCAGA...GGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CAA 90 bp GCCCAGCAGCTGCCTCCACACCACTCAGCCTCCCTCTTAAGTTCTAGTTTTCGATGTCTCATCTTGCGCTaGAGAGCTTCCAGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: AQQLPPHHSASLLSSSFRCLILR*RASSSE
Trigger: CTCTGAGCTGGAAGCTCTCAAGCGCAAGATGAGACA...TCGAAAACTAGAACTTAAGAGGGAGGCTGAGTGGTGTGGAGGCAGCTGCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CAA 90 bp CTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCTCCGCTGGCTTAGAATaGGACCGTTCAAACACAGCT +
Preference number: 5 (lower is better)
Translates to: LQPCGHKEYACKVLHLQCSAGLE*DRSNTA
Trigger: AGCTGTGTTTGAACGGTCCAATTCTAAGCCAGCGGA...GCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CAA 90 bp CAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATGTCTCGCTGTTATCATaGCATGCTCGCCCCGGATAT +
Preference number: 5 (lower is better)
Translates to: QPCGHKEYACKVLHLQCHVSLLS*HARPGY
Trigger: ATATCCGGGGCGAGCATGCAATGATAACAGCGAGAC...ATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp CTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCTGTCTTTGTGGTCATTaGGGGGTGAGAGCTGGCTTA +
Preference number: 5 (lower is better)
Translates to: LQPCGHKEYACKVLHLQCCLCGH*GVRAGL
Trigger: TAAGCCAGCTCTCACCCCCAAATGACCACAAAGACA...GCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp TGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCATGCCATGCCCTCCATaGGCTGGAGTGCTGCATGGA +
Preference number: 5 (lower is better)
Translates to: CGHKEYACKVLHLQCHHFMPCPP*AGVLHG
Trigger: TCCATGCAGCACTCCAGCCAATGGAGGGCATGGCAT...GAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp TCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCTCCTTTGGGGACTCCTaGCACACCACCACCATCTGT +
Preference number: 5 (lower is better)
Translates to: SRTSCNPVVTKSMRARSSSFGDS*HTTTIC
Trigger: ACAGATGGTGGTGGTGTGCAAGGAGTCCCCAAAGGA...GGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp CGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCACATTCACACACTGACTaGGCGCAATTTGCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: RPATLWSQRVCVQGPPPPHSHTD*AQFAVL
Trigger: CAGCACAGCAAATTGCGCCAAGTCAGTGTGTGAATG...TGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp GCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCAAATCCCATCAGCTaGGCCACACAGACTGGTTTC +
Preference number: 5 (lower is better)
Translates to: ATLWSQRVCVQGPPPPVPSNPIS*ATQTGF
Trigger: GAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGA...TGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp GGGCATTTCCCAAGTATGGTGAGCCAAGCTCCCTGTGATTCTTCTGGCACTAAAGCTCACGGACAGCTCTaGCAGCTTCCCCTCCTGGTT +
Preference number: 5 (lower is better)
Translates to: GHFPSMVSQAPCDSSGTKAHGQL*QLPLLV
Trigger: AACCAGGAGGGGAAGCTGCAAGAGCTGTCCGTGAGC...TTTAGTGCCAGAAGAATCACAGGGAGCTTGGCTCACCATACTTGGGAAATGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CAA 90 bp CGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGAACAGATCTTGTCCTaGCCCATCAGAGGAGCTGAT +
Preference number: 5 (lower is better)
Translates to: RPATLWSQRVCVQGPPPPEQILS*PIRGAD
Trigger: ATCAGCTCCTCTGATGGGCAAGGACAAGATCTGTTC...TGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp CAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATTTCAGACAAACCTGTTaGCTGATGCTCCAGCCCGCT +
Preference number: 5 (lower is better)
Translates to: QPCGHKEYACKVLHLQCHFRQTC*LMLQPA
Trigger: AGCGGGCTGGAGCATCAGCAAACAGGTTTGTCTGAA...ATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp AAAGGTAGCTGGAAGCAGGAAACTTCTCCCTGTATGGGCTTCCCAGCTGCAGGGGAGTCAGGACCTACTTaGTGGGGCAGATCCAGAAAC +
Preference number: 5 (lower is better)
Translates to: KGSWKQETSPCMGFPAAGESGPT*WGRSRN
Trigger: GTTTCTGGATCTGCCCCACAAAGTAGGTCCTGACTC...CCCTGCAGCTGGGAAGCCCATACAGGGAGAAGTTTCCTGCTTCCAGCTACCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CAA 90 bp CCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATGAGTCAGGACCTACTTaGTGGGGCAGATCCAGAAAC +
Preference number: 5 (lower is better)
Translates to: PCGHKEYACKVLHLQCHHESGPT*WGRSRN
Trigger: GTTTCTGGATCTGCCCCACAAAGTAGGTCCTGACTC...ATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCACAGGTGACGTCTGTTaGTGTGTGCTGGACTGCGAG +
Preference number: 5 (lower is better)
Translates to: VVTKSMRARSSTSSAIISTGDVC*CVLDCE
Trigger: CTCGCAGTCCAGCACACACAAACAGACGTCACCTGT...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS TCA 90 bp CAAACACAGCTCTTAGCGACTCCTTCTCATGTCTCATCTTGCGCTTaGGAGCTTCCAGCTCAGAGGTGTCAGCTGTGGTCCCCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: QTQLLATPSHVSSCA*ELPAQRCQLWSPFW
Trigger: CCAGAAAGGGGACCACAGCTGACACCTCTGAGCTGGAAGCTCTCAAGCGCAAGATGAGACATGAGAAGGAGTCGCTAAGAGCTGTGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS GCA 90 bp AAGTGGGCTTTCCAGAGATGCAATGTGACTTGCTTGCCCTTCCCCTaGACCAAGGGGTCACCGTCTCTGTGTCTCTGTACTCCTCAAACA +
Preference number: 5 (lower is better)
Translates to: KWAFQRCNVTCLPFP*TKGSPSLCLCTPQT
Trigger: TGTTTGAGGAGTACAGAGACACAGAGACGGTGACCCCTTGGTGCAGGGGAAGGGCAAGCAAGTCACATTGCATCTCTGGAAAGCCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558882.1
CDS GCA 90 bp GATATTAGCAATGTTGACCCAGACTCCAAGTGGGCTTTCCAGAGATaGAATGTGACTTGCTTGCCCTTCCCCTGCACCAAGGGGTCACCG +
Preference number: 5 (lower is better)
Translates to: DISNVDPDSKWAFQR*NVTCLPFPCTKGSP
Trigger: CGGTGACCCCTTGGTGCAGGGGAAGGGCAAGCAAGTCACATTGCATCTCTGGAAAGCCCACTTGGAGTCTGGGTCAACATTGCTAATATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558882.1
CDS GCA 90 bp AAGCCCTCAGAGGAGATACCTTCCTCTGGGGTTACCGACCTCCTGTaGCGGCACTTCCAAATCCTGGGAACTGAAATGGACTGTCCATAT +
Preference number: 5 (lower is better)
Translates to: KPSEEIPSSGVTDLL*RHFQILGTEMDCPY
Trigger: ATATGGACAGTCCATTTCAGTTCCCAGGATTTGGAAGTGCCGGCACAGGAGGTCGGTAACCCCAGAGGAAGGTATCTCCTCTGAGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672206.1
CDS CCA 90 bp CCATTATGCCTACCTAATTATTCATGCCTTGGAGATGCCGGTTTGTaGTCAGGCTTCCCAGGCTCCAGTGGTGAGGCATGTGATGGTGGC +
Preference number: 5 (lower is better)
Translates to: PLCLPNYSCLGDAGL*SGFPGSSGEACDGG
Trigger: GCCACCATCACATGCCTCACCACTGGAGCCTGGGAAGCCTGACCACAAACCGGCATCTCCAAGGCATGAATAATTAGGTAGGCATAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CCA 90 bp GAGGGTGAGCAAGTCGGCTTTGGGTACAAACTCAGCGTGGGCTGCTaGGCGAATGGCAATCGTCTCCTTACCCTTAGAATGCGTTTTAAC +
Preference number: 5 (lower is better)
Translates to: EGEQVGFGYKLSVGC*ANGNRLLTLRMRFN
Trigger: GTTAAAACGCATTCTAAGGGTAAGGAGACGATTGCCATTCGCCCAGCAGCCCACGCTGAGTTTGTACCCAAAGCCGACTTGCTCACCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CCA 90 bp CCGGTTTGTGCGATGATGTGTTCCAGGGCAACTGTGAAAAATCTGTaGAGTCTATGCCCAGAAGCAGCCGAGGCTGCGCACCTTACTACA +
Preference number: 5 (lower is better)
Translates to: PVCAMMCSRATVKNL*SLCPEAAEAAHLTT
Trigger: TGTAGTAAGGTGCGCAGCCTCGGCTGCTTCTGGGCATAGACTCCACAGATTTTTCACAGTTGCCCTGGAACACATCATCGCACAAACCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CAA 90 bp GGCAGGATGTGCTTAAGCTGCCAAATGGCATCCCGATCACCTCCTCTCCAGGAAACAGGCTGCGTCAATTaGAGCAAAGCTAAGTCCCCA +
Preference number: 5 (lower is better)
Translates to: GRMCLSCQMASRSPPLQETGCVN*SKAKSP
Trigger: TGGGGACTTAGCTTTGCTCAAATTGACGCAGCCTGT...TTCCTGGAGAGGAGGTGATCGGGATGCCATTTGGCAGCTTAAGCACATCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CAA 90 bp CTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCTGGCCTTCGGATCAGTaGCTTTCTTCTCACTCTTCA +
Preference number: 5 (lower is better)
Translates to: LQPCGHKEYACKVLHLQCWPSDQ*LSSHSS
Trigger: TGAAGAGTGAGAAGAAAGCAACTGATCCGAAGGCCA...GCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CAA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGGCCGCTCTGGCTCTCTaGGTCAGCATTGCAGCCCAT +
Preference number: 5 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLAALAL*VSIAAH
Trigger: ATGGGCTGCAATGCTGACCAAGAGAGCCAGAGCGGC...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CAA 90 bp TCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCCTGTGTCTTTTGTCTTaGGGGGTGGCCAGACAGCTT +
Preference number: 5 (lower is better)
Translates to: SRTSCNPVVTKSMRARSSLCLLS*GVARQL
Trigger: AAGCTGTCTGGCCACCCCCAAAGACAAAAGACACAG...GGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCGTCTCGCTGTTATCATaGCATGCTCGCCCCGGATAT +
Preference number: 5 (lower is better)
Translates to: VVTKSMRARSSTSSAIISVSLLS*HARPGY
Trigger: ATATCCGGGGCGAGCATGCAATGATAACAGCGAGAC...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp CAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATATGCCTTCTGCTGATTaGATGCCATGCCCTCCATTG +
Preference number: 5 (lower is better)
Translates to: QPCGHKEYACKVLHLQCHMPSAD*MPCPPL
Trigger: CAATGGAGGGCATGGCATCAAATCAGCAGAAGGCAT...ATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp CATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGCACTCACAGGTGGCATaGGAGGTGCGGGAGACAAAG +
Preference number: 5 (lower is better)
Translates to: HLSRTSCNPVVTKSMRARHSQVA*EVRETK
Trigger: CTTTGTCTCCCGCACCTCCAATGCCACCTGTGAGTG...CCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp CGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCATGGTTTTCGAGGACATaGACTGGAAGAAGAGCCAAG +
Preference number: 5 (lower is better)
Translates to: RPATLWSQRVCVQGPPPPWFSRT*TGRRAK
Trigger: CTTGGCTCTTCTTCCAGTCAATGTCCTCGAAAACCA...TGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp CGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGAAGTTTATGGCTATTaGTCTCCCTCTCTCCACCCA +
Preference number: 5 (lower is better)
Translates to: RPATLWSQRVCVQGPPPPEVYGY*SPSLHP
Trigger: TGGGTGGAGAGAGGGAGACAAATAGCCATAAACTTC...TGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp GCCTCTAATAAGGTGTCAACAGCGGACAGGTGTGCAGAAATGACACAAAATGGGCAGCAACGTGGTACATaGGTGGACTTGGGAGGGGGC +
Preference number: 5 (lower is better)
Translates to: ASNKVSTADRCAEMTQNGQQRGT*VDLGGG
Trigger: GCCCCCTCCCAAGTCCACCAATGTACCACGTTGCTG...CCCATTTTGTGTCATTTCTGCACACCTGTCCGCTGTTGACACCTTATTAGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp CCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCAAAAGGCAACTGTaGGGCAGTAGGACCATCACC +
Preference number: 5 (lower is better)
Translates to: PCGHKEYACKVLHLQCHHFKRQL*GSRTIT
Trigger: GGTGATGGTCCTACTGCCCAACAGTTGCCTTTTGAA...ATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp CTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCAAGGGAGCTACTCAGTaGTCTATGATGCAGAGGTGT +
Preference number: 5 (lower is better)
Translates to: LQPCGHKEYACKVLHLQCKGATQ*SMMQRC
Trigger: ACACCTCTGCATCATAGACAACTGAGTAGCTCCCTT...GCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp AGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGCTTGGAGATGCCGGTTaGTGGTCAGGCTTCCCAGGC +
Preference number: 5 (lower is better)
Translates to: SDTSFKNVLQPCGHKEYALGDAG*WSGFPG
Trigger: GCCTGGGAAGCCTGACCACAAACCGGCATCTCCAAG...CGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGCTTGGAGATGCCGGTTaGTGGTCAGGCTTCCCAGGC +
Preference number: 5 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLLGDAG*WSGFPG
Trigger: GCCTGGGAAGCCTGACCACAAACCGGCATCTCCAAG...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR CAA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACTCTGAGCTCAGGAGATaGGTTAGCAGTCTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHSELRR*VSSLSL
Trigger: GAGGGAGAGACTGCTAACCAATCTCCTGAGCTCAGA...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp ATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTGCTCACGGACAGCTCTaGCAGCTTCCCCTCCTGGTT +
Preference number: 5 (lower is better)
Translates to: IFQERPATLWSQRVCVQGAHGQL*QLPLLV
Trigger: AACCAGGAGGGGAAGCTGCAAGAGCTGTCCGTGAGC...ACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp CTAGCACCAAGCTCCAAGGACACTGCTTTGCAGGCTAGCACAACTAGAGTTCCTGTGAGCAAGTCGGCTTaGGGTACAAACTCAGCGTGG +
Preference number: 5 (lower is better)
Translates to: LAPSSKDTALQASTTRVPVSKSA*GTNSAW
Trigger: CCACGCTGAGTTTGTACCCAAAGCCGACTTGCTCAC...AGGAACTCTAGTTGTGCTAGCCTGCAAAGCAGTGTCCTTGGAGCTTGGTGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CAA 90 bp CTAGCACCAAGCTCCAAGGACACTGCTTTGCAGGCTAGCACAACTAGAGTTCCTAACCCGGCTCTCCTCTaGTTTCTCGTTTCTGGGCGA +
Preference number: 5 (lower is better)
Translates to: LAPSSKDTALQASTTRVPNPALL*FLVSGR
Trigger: TCGCCCAGAAACGAGAAACAAGAGGAGAGCCGGGTT...AGGAACTCTAGTTGTGCTAGCCTGCAAAGCAGTGTCCTTGGAGCTTGGTGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CAA 90 bp GACACTGCTTTGCAGGCTAGCACAACTAGAGTTCCTCAAGGTTTGGGGGAAGACACAGGTGACGTCTGTTaGTGTGTGCTGGACTGCGAG +
Preference number: 5 (lower is better)
Translates to: DTALQASTTRVPQGLGEDTGDVC*CVLDCE
Trigger: CTCGCAGTCCAGCACACACAAACAGACGTCACCTGT...GTCTTCCCCCAAACCTTGAGGAACTCTAGTTGTGCTAGCCTGCAAAGCAGTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CAA 90 bp ATCAGGAAGAACTATGCCTGGAGCATATGCTTCCATCACCACATCAGTGACTTCAGGCACCAACCGAGGTaGGCCTGCTCTGAGGAAGGC +
Preference number: 5 (lower is better)
Translates to: IRKNYAWSICFHHHISDFRHQPR*ACSEEG
Trigger: GCCTTCCTCAGAGCAGGCCAACCTCGGTTGGTGCCT...GAAGTCACTGATGTGGTGATGGAAGCATATGCTCCAGGCATAGTTCTTCCTGAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CAA 90 bp GCCCAGCAGCTGCCTCCACACCACTCAGCCTCCCTCTTAAGTTCTAGTTTTCGAGGCTTCCTGAGGGATTaGCAATCTACCTTCTCCATC +
Preference number: 5 (lower is better)
Translates to: AQQLPPHHSASLLSSSFRGFLRD*QSTFSI
Trigger: GATGGAGAAGGTAGATTGCAAATCCCTCAGGAAGCC...TCGAAAACTAGAACTTAAGAGGGAGGCTGAGTGGTGTGGAGGCAGCTGCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS TCA 90 bp CCGTTGCCAGCTTCCAGTTTGCTGCTCATCTCAGGTGGAATCCTTTaGGGATCTTCTGCACAGAGCTCTGCACCATTCATTTCCCCAGTG +
Preference number: 5 (lower is better)
Translates to: PLPASSLLLISGGIL*GSSAQSSAPFISPV
Trigger: CACTGGGGAAATGAATGGTGCAGAGCTCTGTGCAGAAGATCCTCAAAGGATTCCACCTGAGATGAGCAGCAAACTGGAAGCTGGCAACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS TCA 90 bp GTCGCCTGGATGTTCGTCCGGCTCCTGGCTGAGGCTGATGATGTCTaGCTCCTCCCTGACTTGGTAGCAGTTATGAAAACCTTTATTGGA +
Preference number: 5 (lower is better)
Translates to: VAWMFVRLLAEADDV*LLPDLVAVMKTFIG
Trigger: TCCAATAAAGGTTTTCATAACTGCTACCAAGTCAGGGAGGAGTCAGACATCATCAGCCTCAGCCAGGAGCCGGACGAACATCCAGGCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS GCA 90 bp TTCGGTTCAGTTTTGGGCATGTCAATGTTGAGCAGCAGAGAGAGCTaGTCCAGGAGAGTGGGAGTGGCCTTCGGATCAGTTGCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: FGSVLGMSMLSSRES*SRRVGVAFGSVAFF
Trigger: GAAGAAAGCAACTGATCCGAAGGCCACTCCCACTCTCCTGGAGCAGCTCTCTCTGCTGCTCAACATTGACATGCCCAAAACTGAACCGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS CCA 90 bp GATGCCATGCCCTCCATTGGCTGGAGTGCTGCATGGATGTCTTTGTaGTCATTTGGGGGTGAGAGCTGGCTTAAAGAGGAGATATTCAGC +
Preference number: 5 (lower is better)
Translates to: DAMPSIGWSAAWMSL*SFGGESWLKEEIFS
Trigger: GCTGAATATCTCCTCTTTAAGCCAGCTCTCACCCCCAAATGACCACAAAGACATCCATGCAGCACTCCAGCCAATGGAGGGCATGGCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
ENST00000672206.1
CDS CCA 90 bp TTCTTCTTATCACCTCTGGGTTGTGAGGAGTCAGGACCTACTTTGTaGGGCAGATCCAGAAACAAGGACTTGTGGCCACCAAGGGGCAAC +
Preference number: 5 (lower is better)
Translates to: FFLSPLGCEESGPTL*GRSRNKDLWPPRGN
Trigger: GTTGCCCCTTGGTGGCCACAAGTCCTTGTTTCTGGATCTGCCCCACAAAGTAGGTCCTGACTCCTCACAACCCAGAGGTGATAAGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCCCCTTCGGTTCAGTTTaGGGCATGTCAATGTTGAGC +
Preference number: 5 (lower is better)
Translates to: VVTKSMRARSSTSSAIISPFGSV*GMSMLS
Trigger: GCTCAACATTGACATGCCCAAAACTGAACCGAAGGG...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CAA 90 bp TATGACAACACCAGCATGTCTGTGCAGATTCTTCTCCAGGAGGGCTTTAGAAGTGCCGCTCTGGCTCTCTaGGTCAGCATTGCAGCCCAT +
Preference number: 5 (lower is better)
Translates to: YDNTSMSVQILLQEGFRSAALAL*VSIAAH
Trigger: ATGGGCTGCAATGCTGACCAAGAGAGCCAGAGCGGC...ACTTCTAAAGCCCTCCTGGAGAAGAATCTGCACAGACATGCTGGTGTTGTCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CAA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTCTCACCACCCTGGGTTaGTGGTACTCCAGGGCCGCT +
Preference number: 5 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSLTTLG*WYSRAA
Trigger: AGCGGCCCTGGAGTACCACAAACCCAGGGTGGTGAG...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CAA 90 bp TCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCTGTCTTTGTGGTCATTaGGGGGTGAGAGCTGGCTTA +
Preference number: 5 (lower is better)
Translates to: SRTSCNPVVTKSMRARSSCLCGH*GVRAGL
Trigger: TAAGCCAGCTCTCACCCCCAAATGACCACAAAGACA...GGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp AGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGATGCCATGCCCTCCATaGGCTGGAGTGCTGCATGGA +
Preference number: 5 (lower is better)
Translates to: SDTSFKNVLQPCGHKEYAMPCPP*AGVLHG
Trigger: TCCATGCAGCACTCCAGCCAATGGAGGGCATGGCAT...CGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCATGCCTTCTGCTGATTaGATGCCATGCCCTCCATTG +
Preference number: 5 (lower is better)
Translates to: VVTKSMRARSSTSSAIISMPSAD*MPCPPL
Trigger: CAATGGAGGGCATGGCATCAAATCAGCAGAAGGCAT...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGCACTCACAGGTGGCATaGGAGGTGCGGGAGACAAAG +
Preference number: 5 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLHSQVA*EVRETK
Trigger: CTTTGTCTCCCGCACCTCCAATGCCACCTGTGAGTG...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp AGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGGTGGAGGTCCAGCACTaGAAGGTGGAGGTAGAGGTG +
Preference number: 5 (lower is better)
Translates to: SDTSFKNVLQPCGHKEYAVEVQH*KVEVEV
Trigger: CACCTCTACCTCCACCTTCAAGTGCTGGACCTCCAC...CGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp TGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCGCTATATCCATCGGCTaGTCCCCGAGTCCTATTTCC +
Preference number: 5 (lower is better)
Translates to: CGHKEYACKVLHLQCHHFAISIG*SPSPIS
Trigger: GGAAATAGGACTCGGGGACAAGCCGATGGATATAGC...GAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp CTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCCATCTGTTTCTCACTaGCTTCTAGTTGCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: LQPCGHKEYACKVLHLQCPSVSH*LLVASS
Trigger: TGAAGAGGCAACTAGAAGCAAGTGAGAAACAGATGG...GCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp CGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAAAGAACTCCTCTAGTTaGTCCTTGAAAGGCTGGAGA +
Preference number: 5 (lower is better)
Translates to: RPATLWSQRVCVQGPPPPKNSSS*SLKGWR
Trigger: TCTCCAGCCTTTCAAGGACAAACTAGAGGAGTTCTT...TGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp GGCAGGATGTGCTTAAGCTGCCAAATGGCATCCCGATCACCTCCTCTCCAGGAACTCTTAGAGTGGACTTaGGGCTTCCACAAGAAACAG +
Preference number: 5 (lower is better)
Translates to: GRMCLSCQMASRSPPLQELLEWT*GFHKKQ
Trigger: CTGTTTCTTGTGGAAGCCCAAAGTCCACTCTAAGAG...TTCCTGGAGAGGAGGTGATCGGGATGCCATTTGGCAGCTTAAGCACATCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp AGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGGGTACATTGGTGGACTaGGGAGGGGGCATCCCAGAT +
Preference number: 5 (lower is better)
Translates to: SDTSFKNVLQPCGHKEYAGTLVD*GGGIPD
Trigger: ATCTGGGATGCCCCCTCCCAAGTCCACCAATGTACC...CGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp CTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCTCCTAACCTGGTTTTaGATACTTCATGGGCCTGAT +
Preference number: 5 (lower is better)
Translates to: LQPCGHKEYACKVLHLQCLLTWF*ILHGPD
Trigger: ATCAGGCCCATGAAGTATCAAAAACCAGGTTAGGAG...GCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp TCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCTGGAAGTTCAGTAGATaGCCCATTCCTTGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: SRTSCNPVVTKSMRARSSWKFSR*PIPWEG
Trigger: CCCTTCCCAAGGAATGGGCAATCTACTGAACTTCCA...GGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp CTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCTAATTATTCATGCCTaGGAGATGCCGGTTTGTGGT +
Preference number: 5 (lower is better)
Translates to: LQPCGHKEYACKVLHLQCLIIHA*EMPVCG
Trigger: ACCACAAACCGGCATCTCCAAGGCATGAATAATTAG...GCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp CAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATAATGGGCTTATGCAATaGGAGGGTACAATGAGTGCC +
Preference number: 5 (lower is better)
Translates to: QPCGHKEYACKVLHLQCHNGLMQ*EGTMSA
Trigger: GGCACTCATTGTACCCTCCAATTGCATAAGCCCATT...ATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp AAAGGTAGCTGGAAGCAGGAAACTTCTCCCTGTATGGGCTTCCCAGCTGCAGGGTTCGTGGGAGTCTGCTaGAAAAATATGTCGCCTGGA +
Preference number: 5 (lower is better)
Translates to: KGSWKQETSPCMGFPAAGFVGVC*KNMSPG
Trigger: TCCAGGCGACATATTTTTCAAGCAGACTCCCACGAA...CCCTGCAGCTGGGAAGCCCATACAGGGAGAAGTTTCCTGCTTCCAGCTACCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CAA 90 bp TGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCTCTGAGCTCAGGAGATaGGTTAGCAGTCTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: CGHKEYACKVLHLQCHHFSELRR*VSSLSL
Trigger: GAGGGAGAGACTGCTAACCAATCTCCTGAGCTCAGA...GAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp AAAGGTAGCTGGAAGCAGGAAACTTCTCCCTGTATGGGCTTCCCAGCTGCAGGGCGTTTTAACTACTCTTaGTACCTGGGAGGACAGGTC +
Preference number: 5 (lower is better)
Translates to: KGSWKQETSPCMGFPAAGRFNYS*YLGGQV
Trigger: GACCTGTCCTCCCAGGTACAAAGAGTAGTTAAAACG...CCCTGCAGCTGGGAAGCCCATACAGGGAGAAGTTTCCTGCTTCCAGCTACCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CAA 90 bp AACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAACCTTCAGGGGGACCTaGTTCACGGCCCCCTCGGCA +
Preference number: 5 (lower is better)
Translates to: NKHLVTHLSRTSCNPVVTTFRGT*FTAPSA
Trigger: TGCCGAGGGGGCCGTGAACAAGGTCCCCCTGAAGGT...TGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp AAAGGTAGCTGGAAGCAGGAAACTTCTCCCTGTATGGGCTTCCCAGCTGCAGGGGAATTATTAAACACCTaGCCAAGAGCTGCCGGTGCT +
Preference number: 5 (lower is better)
Translates to: KGSWKQETSPCMGFPAAGELLNT*PRAAGA
Trigger: AGCACCGGCAGCTCTTGGCAAGGTGTTTAATAATTC...CCCTGCAGCTGGGAAGCCCATACAGGGAGAAGTTTCCTGCTTCCAGCTACCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CAA 90 bp TTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGAGGCACCAACCGAGGTaGGCCTGCTCTGAGGAAGGC +
Preference number: 5 (lower is better)
Translates to: LVTHLSRTSCNPVVTKSMRHQPR*ACSEEG
Trigger: GCCTTCCTCAGAGCAGGCCAACCTCGGTTGGTGCCT...CATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS TCA 90 bp TTCTGTCTCCACGCTTGCAATTTTCTCATCATTTCCGAGGTCAGGTaGAACCCGAGACCCTGCTTCCTGTGGATCCAAGCCATTGCTGGA +
Preference number: 5 (lower is better)
Translates to: FCLHACNFLIISEVR*NPRPCFLWIQAIAG
Trigger: TCCAGCAATGGCTTGGATCCACAGGAAGCAGGGTCTCGGGTTTCACCTGACCTCGGAAATGATGAGAAAATTGCAAGCGTGGAGACAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS GCA 90 bp GGTCAGGTGAAACCCGAGACCCTGCTTCCTGTGGATCCAAGCCATTaGTGGAATCATCCTGCTGAGATGTGGGATTCACGTCTAAACTAT +
Preference number: 5 (lower is better)
Translates to: GQVKPETLLPVDPSH*WNHPAEMWDSRLNY
Trigger: ATAGTTTAGACGTGAATCCCACATCTCAGCAGGATGATTCCAGCAATGGCTTGGATCCACAGGAAGCAGGGTCTCGGGTTTCACCTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS GCA 90 bp TTCTCACTCTTCACTGTCTGCAGCCCTGCCTGCACTAAGGACTTCTaGACAGGCTGCGTCAATTTGAGCAAAGCTAAGTCCCCATCCTTT +
Preference number: 5 (lower is better)
Translates to: FSLFTVCSPACTKDF*TGCVNLSKAKSPSF
Trigger: AAAGGATGGGGACTTAGCTTTGCTCAAATTGACGCAGCCTGTGCAGAAGTCCTTAGTGCAGGCAGGGCTGCAGACAGTGAAGAGTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS GCA 90 bp GGATCAGTTGCTTTCTTCTCACTCTTCACTGTCTGCAGCCCTGCCTaGACTAAGGACTTCTGCACAGGCTGCGTCAATTTGAGCAAAGCT +
Preference number: 5 (lower is better)
Translates to: GSVAFFSLFTVCSPA*TKDFCTGCVNLSKA
Trigger: AGCTTTGCTCAAATTGACGCAGCCTGTGCAGAAGTCCTTAGTGCAGGCAGGGCTGCAGACAGTGAAGAGTGAGAAGAAAGCAACTGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS GCA 90 bp GGAGGGTACAATGAGTGCCTTCCATTATGCCTACCTAATTATTCATaGCTTGGAGATGCCGGTTTGTGGTCAGGCTTCCCAGGCTCCAGT +
Preference number: 5 (lower is better)
Translates to: GGYNECLPLCLPNYS*LGDAGLWSGFPGSS
Trigger: ACTGGAGCCTGGGAAGCCTGACCACAAACCGGCATCTCCAAGGCATGAATAATTAGGTAGGCATAATGGAAGGCACTCATTGTACCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CCA 90 bp CAGGTGAAACCCGAGACCCTGCTTCCTGTGGATCCAAGCCATTGCTaGAATCATCCTGCTGAGATGTGGGATTCACGTCTAAACTATGGA +
Preference number: 5 (lower is better)
Translates to: QVKPETLLPVDPSHC*NHPAEMWDSRLNYG
Trigger: TCCATAGTTTAGACGTGAATCCCACATCTCAGCAGGATGATTCCAGCAATGGCTTGGATCCACAGGAAGCAGGGTCTCGGGTTTCACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS CCA 90 bp CTGAAGACCACCGTTGCCAGCTTCCAGTTTGCTGCTCATCTCAGGTaGAATCCTTTGAGGATCTTCTGCACAGAGCTCTGCACCATTCAT +
Preference number: 5 (lower is better)
Translates to: LKTTVASFQFAAHLR*NPLRIFCTELCTIH
Trigger: ATGAATGGTGCAGAGCTCTGTGCAGAAGATCCTCAAAGGATTCCACCTGAGATGAGCAGCAAACTGGAAGCTGGCAACGGTGGTCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS-3UTR CAA 90 bp CTTTGTGCCCTTGTACTAAACTCCCGTGTCGTGTGGTATGACAACACCAGCATGGTCCGGCTTCTGGTTTaGCTGGTTCTGACACATCAC +
Preference number: 5 (lower is better)
Translates to: LCALVLNSRVVWYDNTSMVRLLV*LVLTHH
Trigger: GTGATGTGTCAGAACCAGCAAAACCAGAAGCCGGAC...CATGCTGGTGTTGTCATACCACACGACACGGGAGTTTAGTACAAGGGCACAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CAA 90 bp CAATCTACCTTCTCCATCAGGTCCCCCAAGGTTCTCCTACTTCACACACATTCCTTGCCAGCTTCCAGTTaGCTGCTCATCTCAGGTGGA +
Preference number: 5 (lower is better)
Translates to: QSTFSIRSPKVLLLHTHSLPASS*LLISGG
Trigger: TCCACCTGAGATGAGCAGCAAACTGGAAGCTGGCAA...GGAATGTGTGTGAAGTAGGAGAACCTTGGGGGACCTGATGGAGAAGGTAGATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CAA 90 bp GACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCTTGGGCATGTCAATGTaGAGCAGCAGAGAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: DTSFKNVLQPCGHKEYACLGMSM*SSRESC
Trigger: GCAGCTCTCTCTGCTGCTCAACATTGACATGCCCAA...GCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CAA 90 bp CTTTGTGCCCTTGTACTAAACTCCCGTGTCGTGTGGTATGACAACACCAGCATGCTCTCTTGGTCAGCATaGCAGCCCATCTCTTCTCTC +
Preference number: 5 (lower is better)
Translates to: LCALVLNSRVVWYDNTSMLSWSA*QPISSL
Trigger: GAGAGAAGAGATGGGCTGCAATGCTGACCAAGAGAG...CATGCTGGTGTTGTCATACCACACGACACGGGAGTTTAGTACAAGGGCACAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CAA 90 bp ACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCACTGTGGTCAGGACTTTaGGAATCAGAGGGGCCATCC +
Preference number: 5 (lower is better)
Translates to: THLSRTSCNPVVTKSMRALWSGL*ESEGPS
Trigger: GGATGGCCCCTCTGATTCCAAAAGTCCTGACCACAG...TGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CAA 90 bp TTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGGGGTGGCCAGACAGCTaGAAGTCTGCCAGGAGTCCT +
Preference number: 5 (lower is better)
Translates to: LVTHLSRTSCNPVVTKSMGWPDS*KSARSP
Trigger: AGGACTCCTGGCAGACTTCAAGCTGTCTGGCCACCC...CATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp GACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCCTGTGTCTTTTGTCTTaGGGGGTGGCCAGACAGCTT +
Preference number: 5 (lower is better)
Translates to: DTSFKNVLQPCGHKEYACLCLLS*GVARQL
Trigger: AAGCTGTCTGGCCACCCCCAAAGACAAAAGACACAG...GCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp TGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCTCACTTTCACAGGGCTaGAGGAAGGTCTCTCTGTCT +
Preference number: 5 (lower is better)
Translates to: CGHKEYACKVLHLQCHHFSLSQG*RKVSLS
Trigger: AGACAGAGAGACCTTCCTCAAGCCCTGTGAAAGTGA...GAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp GTGATGCTGACATTAACAAGAGGCAGTCACAGCAGTGTGTCTCACATGGGCTCCTGTCTTTGTGGTCATTaGGGGGTGAGAGCTGGCTTA +
Preference number: 5 (lower is better)
Translates to: VMLTLTRGSHSSVSHMGSCLCGH*GVRAGL
Trigger: TAAGCCAGCTCTCACCCCCAAATGACCACAAAGACA...GGAGCCCATGTGAGACACACTGCTGTGACTGCCTCTTGTTAATGTCAGCATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp CTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCAAGATTCCCACAGTTaGAGATCGTTTTCCATCCAA +
Preference number: 5 (lower is better)
Translates to: LQPCGHKEYACKVLHLQCQDSHS*RSFSIQ
Trigger: TTGGATGGAAAACGATCTCAAACTGTGGGAATCTTG...GCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp TCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCCCATTATCCCGACTTTaGACATCCTTGAGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: SRTSCNPVVTKSMRARSSPLSRL*TSLSLG
Trigger: GCCCAAACTCAAGGATGTCAAAAGTCGGGATAATGG...GGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp AGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGGCTGGAGATACTCCTTaGGGGACTCCTTGCACACCA +
Preference number: 5 (lower is better)
Translates to: SDTSFKNVLQPCGHKEYAAGDTP*GTPCTP
Trigger: TGGTGTGCAAGGAGTCCCCAAAGGAGTATCTCCAGC...CGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp ATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTGCTGGAGATACTCCTTaGGGGACTCCTTGCACACCA +
Preference number: 5 (lower is better)
Translates to: IFQERPATLWSQRVCVQGAGDTP*GTPCTP
Trigger: TGGTGTGCAAGGAGTCCCCAAAGGAGTATCTCCAGC...ACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp GGCAGGATGTGCTTAAGCTGCCAAATGGCATCCCGATCACCTCCTCTCCAGGAACCTTCTCACCAGACTTaGGCTTCATCCCAAAATATC +
Preference number: 5 (lower is better)
Translates to: GRMCLSCQMASRSPPLQEPSHQT*ASSQNI
Trigger: GATATTTTGGGATGAAGCCAAAGTCTGGTGAGAAGG...TTCCTGGAGAGGAGGTGATCGGGATGCCATTTGGCAGCTTAAGCACATCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp TGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCATTTTCTCCTGGGAGTaGGGGTGCAGAATCTCTGCT +
Preference number: 5 (lower is better)
Translates to: CGHKEYACKVLHLQCHHFIFSWE*GCRISA
Trigger: AGCAGAGATTCTGCACCCCAACTCCCAGGAGAAAAT...GAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp CGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGAGTCTTTGATCATATaGTCCATTCATCTCCAGTCC +
Preference number: 5 (lower is better)
Translates to: RPATLWSQRVCVQGPPPPESLII*SIHLQS
Trigger: GGACTGGAGATGAATGGACAATATGATCAAAGACTC...TGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp GGCAGGATGTGCTTAAGCTGCCAAATGGCATCCCGATCACCTCCTCTCCAGGAACTCGGCTTTTCTGTTTaGCTTGTCTCGTTCCTTCAT +
Preference number: 5 (lower is better)
Translates to: GRMCLSCQMASRSPPLQELGFSV*LVSFLH
Trigger: ATGAAGGAACGAGACAAGCAAAACAGAAAAGCCGAG...TTCCTGGAGAGGAGGTGATCGGGATGCCATTTGGCAGCTTAAGCACATCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp TTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCAGCAACGTGGTACATaGGTGGACTTGGGAGGGGGC +
Preference number: 5 (lower is better)
Translates to: LVTHLSRTSCNPVVTKSMQQRGT*VDLGGG
Trigger: GCCCCCTCCCAAGTCCACCAATGTACCACGTTGCTG...CATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp GGAGGAGGGGCCAAGGGAGCTACTCAGTTGTCTATGATGCAGAGGTGTGAAAAAAGGCTGAGAAGAGGTTaGCAGCTTCTACTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: GGGAKGATQLSMMQRCEKRLRRG*QLLLSL
Trigger: CAAGGACAGTAGAAGCTGCAAACCTCTTCTCAGCCT...TTTTTCACACCTCTGCATCATAGACAACTGAGTAGCTCCCTTGGCCCCTCCTCC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp TCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCCTGACTTGGCGCAATTaGCTGTGCTGTTGTATGCAA +
Preference number: 5 (lower is better)
Translates to: SRTSCNPVVTKSMRARSSLTWRN*LCCCMQ
Trigger: TTGCATACAACAGCACAGCAAATTGCGCCAAGTCAG...GGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp GTGATGCTGACATTAACAAGAGGCAGTCACAGCAGTGTGTCTCACATGGGCTCCGCCTGCAAGCGTGCATaGCTAATTCCCATTCACACA +
Preference number: 5 (lower is better)
Translates to: VMLTLTRGSHSSVSHMGSACKRA*LIPIHT
Trigger: TGTGTGAATGGGAATTAGCAATGCACGCTTGCAGGC...GGAGCCCATGTGAGACACACTGCTGTGACTGCCTCTTGTTAATGTCAGCATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp TCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCAGTTCACATGAGCTCTaGACTGAAGGACACGATCCT +
Preference number: 5 (lower is better)
Translates to: SRTSCNPVVTKSMRARSSSSHEL*TEGHDP
Trigger: AGGATCGTGTCCTTCAGTCAAGAGCTCATGTGAACT...GGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACAGTTCACATGAGCTCTaGACTGAAGGACACGATCCT +
Preference number: 5 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHSSHEL*TEGHDP
Trigger: AGGATCGTGTCCTTCAGTCAAGAGCTCATGTGAACT...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp CCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTCCATGCCAAATTCTTaGGACGTGATTTTCTGCCTG +
Preference number: 5 (lower is better)
Translates to: PCGHKEYACKVLHLQCHHSMPNS*DVIFCL
Trigger: CAGGCAGAAAATCACGTCCAAAGAATTTGGCATGGA...ATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp CTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCAAAGCAGGTACACGTTaGCCAAGGACATTAACAAAC +
Preference number: 5 (lower is better)
Translates to: LQPCGHKEYACKVLHLQCKAGTR*PRTLTN
Trigger: GTTTGTTAATGTCCTTGGCAAACGTGTACCTGCTTT...GCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCTTCGTGGGAGTCTGCTaGAAAAATATGTCGCCTGGA +
Preference number: 5 (lower is better)
Translates to: VVTKSMRARSSTSSAIISFVGVC*KNMSPG
Trigger: TCCAGGCGACATATTTTTCAAGCAGACTCCCACGAA...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp ACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGGACCTCCGAGGCTTTTaGTTCCCGTGGGTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: TFSDTSFKNVLQPCGHKEDLRGF*FPWVLL
Trigger: GAGGAGCACCCACGGGAACAAAAAGCCTCGGAGGTC...CTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp ATCAGGAAGAACTATGCCTGGAGCATATGCTTCCATCACCACATCAGTGACTTCGAGACAGGTTTCTGCTaGCAAGTCCGCTTAGCCGGC +
Preference number: 5 (lower is better)
Translates to: IRKNYAWSICFHHHISDFETGFC*QVRLAG
Trigger: GCCGGCTAAGCGGACTTGCAAGCAGAAACCTGTCTC...GAAGTCACTGATGTGGTGATGGAAGCATATGCTCCAGGCATAGTTCTTCCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CAA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCAGAGACAGGTTTCTGCTaGCAAGTCCGCTTAGCCGGC +
Preference number: 5 (lower is better)
Translates to: LFSNPISLATQTGFICVAETGFC*QVRLAG
Trigger: GCCGGCTAAGCGGACTTGCAAGCAGAAACCTGTCTC...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR CAA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCGTTTTAACTACTCTTaGTACCTGGGAGGACAGGTC +
Preference number: 5 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHRFNYS*YLGGQV
Trigger: GACCTGTCCTCCCAGGTACAAAGAGTAGTTAAAACG...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp GCCTCTAATAAGGTGTCAACAGCGGACAGGTGTGCAGAAATGACACAAAATGGGAACCCGGCTCTCCTCTaGTTTCTCGTTTCTGGGCGA +
Preference number: 5 (lower is better)
Translates to: ASNKVSTADRCAEMTQNGNPALL*FLVSGR
Trigger: TCGCCCAGAAACGAGAAACAAGAGGAGAGCCGGGTT...CCCATTTTGTGTCATTTCTGCACACCTGTCCGCTGTTGACACCTTATTAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR CAA 90 bp GCTGGCAACTCTCTGAGCCCTCTTCTGGGTTTAGGTGGGAAGAGAAATGAAGTGGGAGAAAGGTGGGAGTaGGGTTCAGATAAAGGGACA +
Preference number: 5 (lower is better)
Translates to: AGNSLSPLLGLGGKRNEVGERWE*GSDKGT
Trigger: TGTCCCTTTATCTGAACCCAACTCCCACCTTTCTCC...CACTTCATTTCTCTTCCCACCTAAACCCAGAAGAGGGCTCAGAGAGTTGCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CAA 90 bp GCAATCTACCTTCTCCATCAGGTCCCCCAAGGTTCTCCTACTTCACACACATTCGCACAGCAAACACACTaGGTCTCTTTCGGGTCACAG +
Preference number: 5 (lower is better)
Translates to: AIYLLHQVPQGSPTSHTFAQQTH*VSFGSQ
Trigger: CTGTGACCCGAAAGAGACCAAGTGTGTTTGCTGTGC...GAATGTGTGTGAAGTAGGAGAACCTTGGGGGACCTGATGGAGAAGGTAGATTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CAA 90 bp ACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAGCGCCTCCATCTCTGTaGGGAAGGTCTTTAGGTGTC +
Preference number: 5 (lower is better)
Translates to: THLSRTSCNPVVTKSMRAAPPSL*GRSLGV
Trigger: GACACCTAAAGACCTTCCCAACAGAGATGGAGGCGC...TGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR CAA 90 bp CCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATACAATTCGCTCCTGTTaGACTTCTCCCTTTCCTCAT +
Preference number: 5 (lower is better)
Translates to: PCGHKEYACKVLHLQCHHTIRSC*TSPFPH
Trigger: ATGAGGAAAGGGAGAAGTCAAACAGGAGCGAATTGT...ATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS TCA 90 bp TCCCGGCAGCAGGGTCATCCTGCTGCATGCAACAGGTCACAGGAATaGCGGTGTTGTGATTTAGCTGGCTGCACATTTAGATTTGGTTAT +
Preference number: 5 (lower is better)
Translates to: SRQQGHPAACNRSQE*RCCDLAGCTFRFGY
Trigger: ATAACCAAATCTAAATGTGCAGCCAGCTAAATCACAACACCGTCATTCCTGTGACCTGTTGCATGCAGCAGGATGACCCTGCTGCCGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558628.1
CDS TCA 90 bp CAGGCTGTGGTCAGGATGGAGATCCAAGTACAATTCGCTCCTGTTTaGCTTCTCCCTTTCCTCATGAAGCAAAAATGGACAGGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: QAVVRMEIQVQFAPV*LLPFLMKQKWTGWS
Trigger: GGACCAGCCTGTCCATTTTTGCTTCATGAGGAAAGGGAGAAGTCAAACAGGAGCGAATTGTACTTGGATCTCCATCCTGACCACAGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000616417.5
ENST00000672206.1
ENST00000674090.1
CDS CCA 90 bp GAAGGTCTCTCTGTCTGTCTGGACGCACACATTTCTGAAGGTCTTTaGAGGGCAGTCATCATCGGTGGAAATGCACACATCTTTCCTCTC +
Preference number: 5 (lower is better)
Translates to: EGLSVCLDAHISEGL*RAVIIGGNAHIFPL
Trigger: GAGAGGAAAGATGTGTGCATTTCCACCGATGATGACTGCCCTCCAAAGACCTTCAGAAATGTGTGCGTCCAGACAGACAGAGAGACCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
ENST00000672206.1
CDS CCA 90 bp GGATGGCCTTTTTGGAAGAACTCCTCTAGTTTGTCCTTGAAAGGCTaGAGATACTCCTTTGGGGACTCCTTGCACACCACCACCATCTGT +
Preference number: 5 (lower is better)
Translates to: GWPFWKNSSSLSLKG*RYSFGDSLHTTTIC
Trigger: ACAGATGGTGGTGGTGTGCAAGGAGTCCCCAAAGGAGTATCTCCAGCCTTTCAAGGACAAACTAGAGGAGTTCTTCCAAAAAGGCCATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559610.1
CDS-3UTR CAA 90 bp GCCTCTAATAAGGTGTCAACAGCGGACAGGTGTGCAGAAATGACACAAAATGGGCTCTCTTGGTCAGCATaGCAGCCCATCTCTTCTCTC +
Preference number: 5 (lower is better)
Translates to: ASNKVSTADRCAEMTQNGLSWSA*QPISSL
Trigger: GAGAGAAGAGATGGGCTGCAATGCTGACCAAGAGAG...CCCATTTTGTGTCATTTCTGCACACCTGTCCGCTGTTGACACCTTATTAGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CAA 90 bp GGAGGAGGGGCCAAGGGAGCTACTCAGTTGTCTATGATGCAGAGGTGTGAAAAATTTCTTCTGTGTCTTTaGTCTTTGGGGGTGGCCAGA +
Preference number: 5 (lower is better)
Translates to: GGGAKGATQLSMMQRCEKFLLCL*SLGVAR
Trigger: TCTGGCCACCCCCAAAGACAAAAGACACAGAAGAAA...TTTTTCACACCTCTGCATCATAGACAACTGAGTAGCTCCCTTGGCCCCTCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp GACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCATGCCTTCTGCTGATTaGATGCCATGCCCTCCATTG +
Preference number: 5 (lower is better)
Translates to: DTSFKNVLQPCGHKEYACMPSAD*MPCPPL
Trigger: CAATGGAGGGCATGGCATCAAATCAGCAGAAGGCAT...GCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTGTGGAGGTCCAGCACTaGAAGGTGGAGGTAGAGGTG +
Preference number: 5 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSVEVQH*KVEVEV
Trigger: CACCTCTACCTCCACCTTCAAGTGCTGGACCTCCAC...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp ACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGGTGGAGGTCCAGCACTaGAAGGTGGAGGTAGAGGTG +
Preference number: 5 (lower is better)
Translates to: TFSDTSFKNVLQPCGHKEVEVQH*KVEVEV
Trigger: CACCTCTACCTCCACCTTCAAGTGCTGGACCTCCAC...CTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCACGGAGTCATCCACATaGAAAATGGCCTGTTGGATA +
Preference number: 5 (lower is better)
Translates to: VVTKSMRARSSTSSAIISTESST*KMACWI
Trigger: TATCCAACAGGCCATTTTCAATGTGGATGACTCCGT...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGGCTATATCCATCGGCTaGTCCCCGAGTCCTATTTCC +
Preference number: 5 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLAISIG*SPSPIS
Trigger: GGAAATAGGACTCGGGGACAAGCCGATGGATATAGC...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp TGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCATGAGGTCTTCAAACTaGACTTGGGAGGCCAGAAAG +
Preference number: 5 (lower is better)
Translates to: CGHKEYACKVLHLQCHHFMRSSN*TWEARK
Trigger: CTTTCTGGCCTCCCAAGTCAAGTTTGAAGACCTCAT...GAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCAAGAACTCCTCTAGTTaGTCCTTGAAAGGCTGGAGA +
Preference number: 5 (lower is better)
Translates to: VVTKSMRARSSTSSAIISKNSSS*SLKGWR
Trigger: TCTCCAGCCTTTCAAGGACAAACTAGAGGAGTTCTT...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp TCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCCCTTCTCACCAGACTTaGGCTTCATCCCAAAATATC +
Preference number: 5 (lower is better)
Translates to: SRTSCNPVVTKSMRARSSPSHQT*ASSQNI
Trigger: GATATTTTGGGATGAAGCCAAAGTCTGGTGAGAAGG...GGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCAGGCTAGCAGTGGGATaGATTTTCTTTGTCTCCACT +
Preference number: 5 (lower is better)
Translates to: VVTKSMRARSSTSSAIISRLAVG*IFFVST
Trigger: AGTGGAGACAAAGAAAATCAATCCCACTGCTAGCCT...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp TGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCGAAGTTTATGGCTATTaGTCTCCCTCTCTCCACCCA +
Preference number: 5 (lower is better)
Translates to: CGHKEYACKVLHLQCHHFEVYGY*SPSLHP
Trigger: TGGGTGGAGAGAGGGAGACAAATAGCCATAAACTTC...GAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp TGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCTTCCAGGCAGCTGGATaGTTTCTCTCTATAGCTGGA +
Preference number: 5 (lower is better)
Translates to: CGHKEYACKVLHLQCHHFFQAAG*FLSIAG
Trigger: TCCAGCTATAGAGAGAAACAATCCAGCTGCCTGGAA...GAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp AAGCACACCCAAGGCTGTGCTTGCTCAGGTATTACATTTTCTCCTGGGAGTTGGTGGAAGTTCAGTAGATaGCCCATTCCTTGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: KHTQGCACSGITFSPGSWWKFSR*PIPWEG
Trigger: CCCTTCCCAAGGAATGGGCAATCTACTGAACTTCCA...CCAACTCCCAGGAGAAAATGTAATACCTGAGCAAGCACAGCCTTGGGTGTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACTCCATGCCAAATTCTTaGGACGTGATTTTCTGCCTG +
Preference number: 5 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHSMPNS*DVIFCL
Trigger: CAGGCAGAAAATCACGTCCAAAGAATTTGGCATGGA...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp GGAGGAGGGGCCAAGGGAGCTACTCAGTTGTCTATGATGCAGAGGTGTGAAAAAAAGGGAGCTACTCAGTaGTCTATGATGCAGAGGTGT +
Preference number: 5 (lower is better)
Translates to: GGGAKGATQLSMMQRCEKKGATQ*SMMQRC
Trigger: ACACCTCTGCATCATAGACAACTGAGTAGCTCCCTT...TTTTTCACACCTCTGCATCATAGACAACTGAGTAGCTCCCTTGGCCCCTCCTCC
50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp CTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCACCACAGAAAGTTACTaGAGATTCAAAAATCTGGCG +
Preference number: 5 (lower is better)
Translates to: LQPCGHKEYACKVLHLQCTTESY*RFKNLA
Trigger: CGCCAGATTTTTGAATCTCAAGTAACTTTCTGTGGT...GCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp CTAGCACCAAGCTCCAAGGACACTGCTTTGCAGGCTAGCACAACTAGAGTTCCTAATGGGCTTATGCAATaGGAGGGTACAATGAGTGCC +
Preference number: 5 (lower is better)
Translates to: LAPSSKDTALQASTTRVPNGLMQ*EGTMSA
Trigger: GGCACTCATTGTACCCTCCAATTGCATAAGCCCATT...AGGAACTCTAGTTGTGCTAGCCTGCAAAGCAGTGTCCTTGGAGCTTGGTGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CAA 90 bp TGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCTTCGTGGGAGTCTGCTaGAAAAATATGTCGCCTGGA +
Preference number: 5 (lower is better)
Translates to: CGHKEYACKVLHLQCHHFFVGVC*KNMSPG
Trigger: TCCAGGCGACATATTTTTCAAGCAGACTCCCACGAA...GAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp GGGCATTTCCCAAGTATGGTGAGCCAAGCTCCCTGTGATTCTTCTGGCACTAAAGAACAGATCTTGTCCTaGCCCATCAGAGGAGCTGAT +
Preference number: 5 (lower is better)
Translates to: GHFPSMVSQAPCDSSGTKEQILS*PIRGAD
Trigger: ATCAGCTCCTCTGATGGGCAAGGACAAGATCTGTTC...TTTAGTGCCAGAAGAATCACAGGGAGCTTGGCTCACCATACTTGGGAAATGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CAA 90 bp ACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGGAGACAGGTTTCTGCTaGCAAGTCCGCTTAGCCGGC +
Preference number: 5 (lower is better)
Translates to: TFSDTSFKNVLQPCGHKEETGFC*QVRLAG
Trigger: GCCGGCTAAGCGGACTTGCAAGCAGAAACCTGTCTC...CTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp GGAGGAGGGGCCAAGGGAGCTACTCAGTTGTCTATGATGCAGAGGTGTGAAAAACGTTTTAACTACTCTTaGTACCTGGGAGGACAGGTC +
Preference number: 5 (lower is better)
Translates to: GGGAKGATQLSMMQRCEKRFNYS*YLGGQV
Trigger: GACCTGTCCTCCCAGGTACAAAGAGTAGTTAAAACG...TTTTTCACACCTCTGCATCATAGACAACTGAGTAGCTCCCTTGGCCCCTCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR CAA 90 bp CTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCGAATTATTAAACACCTaGCCAAGAGCTGCCGGTGCT +
Preference number: 5 (lower is better)
Translates to: LSRTSCNPVVTKSMRARSELLNT*PRAAGA
Trigger: AGCACCGGCAGCTCTTGGCAAGGTGTTTAATAATTC...GGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp ATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTTTAGGTGTCTGCTCATaGAAGCCGTCCCAGGGAAAG +
Preference number: 5 (lower is better)
Translates to: IFQERPATLWSQRVCVQGLGVCS*KPSQGK
Trigger: CTTTCCCTGGGACGGCTTCAATGAGCAGACACCTAA...ACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS TCA 90 bp GGTCTGAGCTCAGGAGATTGGTTAGCAGTCTCTCCCTCTCTGTTGTaGGTTTGTACAGCTCAGTTAGAATGTCTTTCGTGGGAGTCTGCT +
Preference number: 5 (lower is better)
Translates to: GLSSGDWLAVSPSLL*VCTAQLECLSWESA
Trigger: AGCAGACTCCCACGAAAGACATTCTAACTGAGCTGTACAAACTCACAACAGAGAGGGAGAGACTGCTAACCAATCTCCTGAGCTCAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS TCA 90 bp GATCGACTGAGCCACTTCAAGTCCGGCTTCTGGTTTTGCTGGTTCTaGCACATCACTGCCATCCAGAGAATTATCAACGTTCTCCATGTC +
Preference number: 5 (lower is better)
Translates to: DRLSHFKSGFWFCWF*HITAIQRIINVLHV
Trigger: GACATGGAGAACGTTGATAATTCTCTGGATGGCAGTGATGTGTCAGAACCAGCAAAACCAGAAGCCGGACTTGAAGTGGCTCAGTCGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558197.1
ENST00000559150.1
CDS GCA 90 bp TTCACTGTCTGCAGCCCTGCCTGCACTAAGGACTTCTGCACAGGCTaGGTCAATTTGAGCAAAGCTAAGTCCCCATCCTTTGGTTTAATT +
Preference number: 5 (lower is better)
Translates to: FTVCSPACTKDFCTG*VNLSKAKSPSFGLI
Trigger: AATTAAACCAAAGGATGGGGACTTAGCTTTGCTCAAATTGACGCAGCCTGTGCAGAAGTCCTTAGTGCAGGCAGGGCTGCAGACAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS CCA 90 bp TCTAGTACCCAAAGGTTAGGCCTTGTTCTAGAAAGAGGAAGGGAGTaGCTGGAACAGATCTTGTCCTTGCCCATCAGAGGAGCTGATTCT +
Preference number: 5 (lower is better)
Translates to: SSTQRLGLVLERGRE*LEQILSLPIRGADS
Trigger: AGAATCAGCTCCTCTGATGGGCAAGGACAAGATCTGTTCCAGCCACTCCCTTCCTCTTTCTAGAACAAGGCCTAACCTTTGGGTACTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp AGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTCACTTTCACAGGGCTaGAGGAAGGTCTCTCTGTCT +
Preference number: 5 (lower is better)
Translates to: SDTSFKNVLQPCGHKEYASLSQG*RKVSLS
Trigger: AGACAGAGAGACCTTCCTCAAGCCCTGTGAAAGTGA...CGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp TCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCCAAGATTCCCACAGTTaGAGATCGTTTTCCATCCAA +
Preference number: 5 (lower is better)
Translates to: SRTSCNPVVTKSMRARSSQDSHS*RSFSIQ
Trigger: TTGGATGGAAAACGATCTCAAACTGTGGGAATCTTG...GGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp CATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGATGAGGTCTTCAAACTaGACTTGGGAGGCCAGAAAG +
Preference number: 5 (lower is better)
Translates to: HLSRTSCNPVVTKSMRARMRSSN*TWEARK
Trigger: CTTTCTGGCCTCCCAAGTCAAGTTTGAAGACCTCAT...CCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp ACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTCCTTTGGGGACTCCTaGCACACCACCACCATCTGT +
Preference number: 5 (lower is better)
Translates to: TFSDTSFKNVLQPCGHKESFGDS*HTTTIC
Trigger: ACAGATGGTGGTGGTGTGCAAGGAGTCCCCAAAGGA...CTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp TGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCCTTCTCACCAGACTTaGGCTTCATCCCAAAATATC +
Preference number: 5 (lower is better)
Translates to: CGHKEYACKVLHLQCHHFPSHQT*ASSQNI
Trigger: GATATTTTGGGATGAAGCCAAAGTCTGGTGAGAAGG...GAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp CGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCATTAAATAGTTTTCCATaGTTCCTGCGGCTTAATGAG +
Preference number: 5 (lower is better)
Translates to: RPATLWSQRVCVQGPPPPLNSFP*FLRLNE
Trigger: CTCATTAAGCCGCAGGAACAATGGAAAACTATTTAA...TGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp GACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCCTCTTAGAGTGGACTTaGGGCTTCCACAAGAAACAG +
Preference number: 5 (lower is better)
Translates to: DTSFKNVLQPCGHKEYACLLEWT*GFHKKQ
Trigger: CTGTTTCTTGTGGAAGCCCAAAGTCCACTCTAAGAG...GCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp CATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGCACCCAAGGCTGTGCTaGCTCAGGTATTACATTTTC +
Preference number: 5 (lower is better)
Translates to: HLSRTSCNPVVTKSMRARHPRLC*LRYYIF
Trigger: GAAAATGTAATACCTGAGCAAGCACAGCCTTGGGTG...CCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCGCTTTTCTGTTTTGCTaGTCTCGTTCCTTCATTGTG +
Preference number: 5 (lower is better)
Translates to: VVTKSMRARSSTSSAIISAFLFC*SRSFIV
Trigger: CACAATGAAGGAACGAGACAAGCAAAACAGAAAAGC...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp AACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAGGTACATTGGTGGACTaGGGAGGGGGCATCCCAGAT +
Preference number: 5 (lower is better)
Translates to: NKHLVTHLSRTSCNPVVTGTLVD*GGGIPD
Trigger: ATCTGGGATGCCCCCTCCCAAGTCCACCAATGTACC...TGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp CTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCACTTCCTTGAACAAATaGTCATTGACCTTTACTGAG +
Preference number: 5 (lower is better)
Translates to: LQPCGHKEYACKVLHLQCTSLNK*SLTFTE
Trigger: CTCAGTAAAGGTCAATGACAATTTGTTCAAGGAAGT...GCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp ACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCATCAAATCCCATCAGCTaGGCCACACAGACTGGTTTC +
Preference number: 5 (lower is better)
Translates to: THLSRTSCNPVVTKSMRASNPIS*ATQTGF
Trigger: GAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGA...TGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACAGTCTTCTTTGCATTTaGCTGGCCCAATGTCATCAA +
Preference number: 5 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHSLLCI*LAQCHQ
Trigger: TTGATGACATTGGGCCAGCAAAATGCAAAGAAGACT...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp TCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCATTCATACTAGGATGTaGACTGCCTTCACTCAGGTT +
Preference number: 5 (lower is better)
Translates to: SRTSCNPVVTKSMRARSSIHTRM*TAFTQV
Trigger: AACCTGAGTGAAGGCAGTCAACATCCTAGTATGAAT...GGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCCCTAATACAGATGCCTaGAATTTCCACGGAAAAGCT +
Preference number: 5 (lower is better)
Translates to: VVTKSMRARSSTSSAIISPNTDA*NFHGKA
Trigger: AGCTTTTCCGTGGAAATTCAAGGCATCTGTATTAGG...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp GACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAATGGGCTTATGCAATaGGAGGGTACAATGAGTGCC +
Preference number: 5 (lower is better)
Translates to: DTSFKNVLQPCGHKEYACNGLMQ*EGTMSA
Trigger: GGCACTCATTGTACCCTCCAATTGCATAAGCCCATT...GCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCAGAGTTACAGTGCCCTaGTATGAAAATCCTCTGACT +
Preference number: 5 (lower is better)
Translates to: VVTKSMRARSSTSSAIISRVTVP*YENPLT
Trigger: AGTCAGAGGATTTTCATACAAGGGCACTGTAACTCT...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp GTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCCCTCTCTGTTGTGAGTTaGTACAGCTCAGTTAGAATG +
Preference number: 5 (lower is better)
Translates to: VVTKSMRARSSTSSAIISLSVVS*YSSVRM
Trigger: CATTCTAACTGAGCTGTACAAACTCACAACAGAGAG...GGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp TCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCCTCTCTGTTGTGAGTTaGTACAGCTCAGTTAGAATG +
Preference number: 5 (lower is better)
Translates to: SRTSCNPVVTKSMRARSSLSVVS*YSSVRM
Trigger: CATTCTAACTGAGCTGTACAAACTCACAACAGAGAG...GGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp ACTCAAGAGCATACTAAAGATTGGGCATTTCCCAAGTATGGTGAGCCAAGCTCCTCTGAGCTCAGGAGATaGGTTAGCAGTCTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: TQEHTKDWAFPKYGEPSSSELRR*VSSLSL
Trigger: GAGGGAGAGACTGCTAACCAATCTCCTGAGCTCAGA...GGAGCTTGGCTCACCATACTTGGGAAATGCCCAATCTTTAGTATGCTCTTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CAA 90 bp ATCAGGAAGAACTATGCCTGGAGCATATGCTTCCATCACCACATCAGTGACTTCTTCAGACAAACCTGTTaGCTGATGCTCCAGCCCGCT +
Preference number: 5 (lower is better)
Translates to: IRKNYAWSICFHHHISDFFRQTC*LMLQPA
Trigger: AGCGGGCTGGAGCATCAGCAAACAGGTTTGTCTGAA...GAAGTCACTGATGTGGTGATGGAAGCATATGCTCCAGGCATAGTTCTTCCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CAA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTGTGAGCAAGTCGGCTTaGGGTACAAACTCAGCGTGG +
Preference number: 5 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSVSKSA*GTNSAW
Trigger: CCACGCTGAGTTTGTACCCAAAGCCGACTTGCTCAC...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp ACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGAACCCGGCTCTCCTCTaGTTTCTCGTTTCTGGGCGA +
Preference number: 5 (lower is better)
Translates to: TFSDTSFKNVLQPCGHKENPALL*FLVSGR
Trigger: TCGCCCAGAAACGAGAAACAAGAGGAGAGCCGGGTT...CTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp GCAATCTACCTTCTCCATCAGGTCCCCCAAGGTTCTCCTACTTCACACACATTCGACTTCTCTTTGGGTTaGGCCAATGGGAATGACGAT +
Preference number: 5 (lower is better)
Translates to: AIYLLHQVPQGSPTSHTFDFSLG*ANGNDD
Trigger: ATCGTCATTCCCATTGGCCAAACCCAAAGAGAAGTC...GAATGTGTGTGAAGTAGGAGAACCTTGGGGGACCTGATGGAGAAGGTAGATTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS GCA 90 bp CCACTTCAAGTCCGGCTTCTGGTTTTGCTGGTTCTGACACATCACTaGCATCCAGAGAATTATCAACGTTCTCCATGTCTCAGTAATGCC +
Preference number: 5 (lower is better)
Translates to: PLQVRLLVLLVLTHH*HPENYQRSPCLSNA
Trigger: GGCATTACTGAGACATGGAGAACGTTGATAATTCTCTGGATGGCAGTGATGTGTCAGAACCAGCAAAACCAGAAGCCGGACTTGAAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558197.1
ENST00000559150.1
CDS CCA 90 bp ATCTGTTTCTCACTTGATATTAGCAATGTTGACCCAGACTCCAAGTaGGCTTTCCAGAGATGCAATGTGACTTGCTTGCCCTTCCCCTGC +
Preference number: 5 (lower is better)
Translates to: ICFSLDISNVDPDSK*AFQRCNVTCLPFPC
Trigger: GCAGGGGAAGGGCAAGCAAGTCACATTGCATCTCTGGAAAGCCCACTTGGAGTCTGGGTCAACATTGCTAATATCAAGTGAGAAACAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558882.1
CDS-3UTR CAA 90 bp ACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTTGCCAGCTTCCAGTTaGCTGCTCATCTCAGGTGGA +
Preference number: 5 (lower is better)
Translates to: TFSDTSFKNVLQPCGHKELPASS*LLISGG
Trigger: TCCACCTGAGATGAGCAGCAAACTGGAAGCTGGCAA...CTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CAA 90 bp GCAATCTACCTTCTCCATCAGGTCCCCCAAGGTTCTCCTACTTCACACACATTCCACTCGAATTCTGGTTaGTTACTGCAGGTAGGTCTT +
Preference number: 5 (lower is better)
Translates to: AIYLLHQVPQGSPTSHTFHSNSG*LLQVGL
Trigger: AAGACCTACCTGCAGTAACAAACCAGAATTCGAGTG...GAATGTGTGTGAAGTAGGAGAACCTTGGGGGACCTGATGGAGAAGGTAGATTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CAA 90 bp ACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGGTCTCGCTGTTATCATaGCATGCTCGCCCCGGATAT +
Preference number: 5 (lower is better)
Translates to: TFSDTSFKNVLQPCGHKEVSLLS*HARPGY
Trigger: ATATCCGGGGCGAGCATGCAATGATAACAGCGAGAC...CTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp CAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATATTGATTACTTCTGGTaGTCTTGCTTTCACTTTCAC +
Preference number: 5 (lower is better)
Translates to: QPCGHKEYACKVLHLQCHIDYFW*SCFHFH
Trigger: GTGAAAGTGAAAGCAAGACAACCAGAAGTAATCAAT...ATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTGCTGCATGGATGTCTTaGTGGTCATTTGGGGGTGAG +
Preference number: 5 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSAAWMS*WSFGGE
Trigger: CTCACCCCCAAATGACCACAAAGACATCCATGCAGC...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp ACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGGCTATATCCATCGGCTaGTCCCCGAGTCCTATTTCC +
Preference number: 5 (lower is better)
Translates to: TFSDTSFKNVLQPCGHKEAISIG*SPSPIS
Trigger: GGAAATAGGACTCGGGGACAAGCCGATGGATATAGC...CTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp TTTCCAAAAGCCAAGATGAGAGCTAAAATATCCTTCACGCTCTTCACGTGCAGCGCTATATCCATCGGCTaGTCCCCGAGTCCTATTTCC +
Preference number: 5 (lower is better)
Translates to: FPKAKMRAKISFTLFTCSAISIG*SPSPIS
Trigger: GGAAATAGGACTCGGGGACAAGCCGATGGATATAGC...GCTGCACGTGAAGAGCGTGAAGGATATTTTAGCTCTCATCTTGGCTTTTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558711.1
CDS-3UTR CAA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGCCATTATCCCGACTTTaGACATCCTTGAGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLPLSRL*TSLSLG
Trigger: GCCCAAACTCAAGGATGTCAAAAGTCGGGATAATGG...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp AACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACATCCTTTGGGGACTCCTaGCACACCACCACCATCTGT +
Preference number: 5 (lower is better)
Translates to: NKHLVTHLSRTSCNPVVTSFGDS*HTTTIC
Trigger: ACAGATGGTGGTGGTGTGCAAGGAGTCCCCAAAGGA...TGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp CCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATATCTTATGCTCTTTTTaGGCTTTTTGGAAGAACTCC +
Preference number: 5 (lower is better)
Translates to: PCGHKEYACKVLHLQCHHILCSF*AFWKNS
Trigger: GGAGTTCTTCCAAAAAGCCAAAAAAGAGCATAAGAT...ATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp GTGATGCTGACATTAACAAGAGGCAGTCACAGCAGTGTGTCTCACATGGGCTCCGCTTTTCTGTTTTGCTaGTCTCGTTCCTTCATTGTG +
Preference number: 5 (lower is better)
Translates to: VMLTLTRGSHSSVSHMGSAFLFC*SRSFIV
Trigger: CACAATGAAGGAACGAGACAAGCAAAACAGAAAAGC...GGAGCCCATGTGAGACACACTGCTGTGACTGCCTCTTGTTAATGTCAGCATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp ACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCACTGACTTGGCGCAATTaGCTGTGCTGTTGTATGCAA +
Preference number: 5 (lower is better)
Translates to: THLSRTSCNPVVTKSMRALTWRN*LCCCMQ
Trigger: TTGCATACAACAGCACAGCAAATTGCGCCAAGTCAG...TGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCACATTCACACACTGACTaGGCGCAATTTGCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: LFSNPISLATQTGFICVAHSHTD*AQFAVL
Trigger: CAGCACAGCAAATTGCGCCAAGTCAGTGTGTGAATG...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCAGCCTGCAAGCGTGCATaGCTAATTCCCATTCACACA +
Preference number: 5 (lower is better)
Translates to: LFSNPISLATQTGFICVAACKRA*LIPIHT
Trigger: TGTGTGAATGGGAATTAGCAATGCACGCTTGCAGGC...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp AAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTTCATGTTTCCAAGTaGTTAACTACACGTTTCCCA +
Preference number: 5 (lower is better)
Translates to: KNVLQPCGHKEYACKVLHLHVSK*LTTRFP
Trigger: TGGGAAACGTGTAGTTAACAACTTGGAAACATGAAG...GTGGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp TGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCATCCCCAAAACCTATTaGTGTCATTGCGAGCAAACA +
Preference number: 5 (lower is better)
Translates to: CGHKEYACKVLHLQCHHFIPKTY*CHCEQT
Trigger: TGTTTGCTCGCAATGACACAAATAGGTTTTGGGGAT...GAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp GGAGGAGGGGCCAAGGGAGCTACTCAGTTGTCTATGATGCAGAGGTGTGAAAAATTCTTGCTCATCCCATaGCTTGCAAACTCACAAGAT +
Preference number: 5 (lower is better)
Translates to: GGGAKGATQLSMMQRCEKFLLIP*LANSQD
Trigger: ATCTTGTGAGTTTGCAAGCAATGGGATGAGCAAGAA...TTTTTCACACCTCTGCATCATAGACAACTGAGTAGCTCCCTTGGCCCCTCCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp CTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCCCTAATACAGATGCCTaGAATTTCCACGGAAAAGCT +
Preference number: 5 (lower is better)
Translates to: LSRTSCNPVVTKSMRARSPNTDA*NFHGKA
Trigger: AGCTTTTCCGTGGAAATTCAAGGCATCTGTATTAGG...GGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp GCCTCTAATAAGGTGTCAACAGCGGACAGGTGTGCAGAAATGACACAAAATGGGCAAGGGCACTCACATTaGCCTAATACAGATGCCTTG +
Preference number: 5 (lower is better)
Translates to: ASNKVSTADRCAEMTQNGQGHSH*PNTDAL
Trigger: CAAGGCATCTGTATTAGGCAAATGTGAGTGCCCTTG...CCCATTTTGTGTCATTTCTGCACACCTGTCCGCTGTTGACACCTTATTAGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp GGAGGAGGGGCCAAGGGAGCTACTCAGTTGTCTATGATGCAGAGGTGTGAAAAACCCATGGATCTGAAATaGTTGGAGCTGTTAAACCAA +
Preference number: 5 (lower is better)
Translates to: GGGAKGATQLSMMQRCEKPMDLK*LELLNQ
Trigger: TTGGTTTAACAGCTCCAACAATTTCAGATCCATGGG...TTTTTCACACCTCTGCATCATAGACAACTGAGTAGCTCCCTTGGCCCCTCCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp AGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGGAATTATTAAACACCTaGCCAAGAGCTGCCGGTGCT +
Preference number: 5 (lower is better)
Translates to: SDTSFKNVLQPCGHKEYAELLNT*PRAAGA
Trigger: AGCACCGGCAGCTCTTGGCAAGGTGTTTAATAATTC...CGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS TCA 90 bp TTAGAATGCGTTTTAACTACTCTTTGTACCTGGGAGGACAGGTCCTaGACTTTGGCCACCACTTTGGAGACAGGTTTCTGCTTGCAAGTC +
Preference number: 5 (lower is better)
Translates to: LECVLTTLCTWEDRS*TLATTLETGFCLQV
Trigger: GACTTGCAAGCAGAAACCTGTCTCCAAAGTGGTGGCCAAAGTTCAGGACCTGTCCTCCCAGGTACAAAGAGTAGTTAAAACGCATTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS GCA 90 bp CATTTCTTAGAAAATCCCCGTTGTGCACTTTCCAGGAGAAACAAATaGTTTACACCAACAGAGGCACAGCACGCTGACATCGGAAAGGGA +
Preference number: 5 (lower is better)
Translates to: HFLENPRCALSRRNK*FTPTEAQHADIGKG
Trigger: TCCCTTTCCGATGTCAGCGTGCTGTGCCTCTGTTGGTGTAAAGCATTTGTTTCTCCTGGAAAGTGCACAACGGGGATTTTCTAAGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559610.1
CDS-3UTR CAA 90 bp TTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGTCCGGCTTCTGGTTTaGCTGGTTCTGACACATCAC +
Preference number: 5 (lower is better)
Translates to: FSDTSFKNVLQPCGHKEYVRLLV*LVLTHH
Trigger: GTGATGTGTCAGAACCAGCAAAACCAGAAGCCGGAC...ATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CAA 90 bp CTTCACACACATTCCCCCTTTCATTCATTCCACTGCATTCATCTTTCATCTTTCCAGTGGAAGCAGCTCTaGAGCAAGGAGAGATGTCCC +
Preference number: 5 (lower is better)
Translates to: LHTHSPFHSFHCIHLSSFQWKQL*SKERCP
Trigger: GGGACATCTCTCCTTGCTCAAGAGCTGCTTCCACTG...GAAAGATGAAAGATGAATGCAGTGGAATGAATGAAAGGGGGAATGTGTGTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CAA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTCTCAGGTGGAATCCTTaGAGGATCTTCTGCACAGAG +
Preference number: 5 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSLRWNP*RIFCTE
Trigger: CTCTGTGCAGAAGATCCTCAAAGGATTCCACCTGAG...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CAA 90 bp ACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCACACTCGAATTCTGGTTaGTTACTGCAGGTAGGTCTT +
Preference number: 5 (lower is better)
Translates to: THLSRTSCNPVVTKSMRAHSNSG*LLQVGL
Trigger: AAGACCTACCTGCAGTAACAAACCAGAATTCGAGTG...TGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CAA 90 bp ATTATGGAAAAACCTACTGAACCACCCAACTTTGATCTGTTCATGTCTATCAATCTCACCACCCTGGGTTaGTGGTACTCCAGGGCCGCT +
Preference number: 5 (lower is better)
Translates to: IMEKPTEPPNFDLFMSINLTTLG*WYSRAA
Trigger: AGCGGCCCTGGAGTACCACAAACCCAGGGTGGTGAG...ATTGATAGACATGAACAGATCAAAGTTGGGTGGTTCAGTAGGTTTTTCCATAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CAA 90 bp TTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATTGTCTCATCTTGCGCTaGAGAGCTTCCAGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: FSDTSFKNVLQPCGHKEYCLILR*RASSSE
Trigger: CTCTGAGCTGGAAGCTCTCAAGCGCAAGATGAGACA...ATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CAA 90 bp TCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCTTTTCAATTTCTTCTTaGTGCTCCCTCTTCAAGTGT +
Preference number: 5 (lower is better)
Translates to: SRTSCNPVVTKSMRARSSFSISS*CSLFKC
Trigger: ACACTTGAAGAGGGAGCACAAAGAAGAAATTGAAAA...GGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTTCACTTTCACAGGGCTaGAGGAAGGTCTCTCTGTCT +
Preference number: 5 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSSLSQG*RKVSLS
Trigger: AGACAGAGAGACCTTCCTCAAGCCCTGTGAAAGTGA...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp TTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCTGCATGGATGTCTTaGTGGTCATTTGGGGGTGAG +
Preference number: 5 (lower is better)
Translates to: FSDTSFKNVLQPCGHKEYAAWMS*WSFGGE
Trigger: CTCACCCCCAAATGACCACAAAGACATCCATGCAGC...ATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp GACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCCGACTTTTGACATCCTaGAGTTTGGGCAGAATTTCT +
Preference number: 5 (lower is better)
Translates to: DTSFKNVLQPCGHKEYACRLLTS*SLGRIS
Trigger: AGAAATTCTGCCCAAACTCAAGGATGTCAAAAGTCG...GCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp ATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCATCTGTTTCTCACTaGCTTCTAGTTGCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: IFQERPATLWSQRVCVQGPSVSH*LLVASS
Trigger: TGAAGAGGCAACTAGAAGCAAGTGAGAAACAGATGG...ACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp GCCTCTAATAAGGTGTCAACAGCGGACAGGTGTGCAGAAATGACACAAAATGGGAGGCTAGCAGTGGGATaGATTTTCTTTGTCTCCACT +
Preference number: 5 (lower is better)
Translates to: ASNKVSTADRCAEMTQNGRLAVG*IFFVST
Trigger: AGTGGAGACAAAGAAAATCAATCCCACTGCTAGCCT...CCCATTTTGTGTCATTTCTGCACACCTGTCCGCTGTTGACACCTTATTAGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp AGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGTAACGACAAAGACTaGAACTCTCCCAAGGCAACT +
Preference number: 5 (lower is better)
Translates to: SDTSFKNVLQPCGHKEYACNDKD*NSPKAT
Trigger: AGTTGCCTTGGGAGAGTTCAAGTCTTTGTCGTTACA...CGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp ACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAACTGATGTCAACTCCTaGCATGGTAACTTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: THLSRTSCNPVVTKSMRATDVNS*HGNLFS
Trigger: GGAGAACAAGTTACCATGCAAGGAGTTGACATCAGT...TGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp TGTTTTCAATGGAAATGGAAGCCTTCCAAATATTATGCAGAACACAATCTCAGTCTGCCGCTGGGTCTCTaGTCCAAGCACACCCAAGGC +
Preference number: 5 (lower is better)
Translates to: CFQWKWKPSKYYAEHNLSLPLGL*SKHTQG
Trigger: GCCTTGGGTGTGCTTGGACAAGAGACCCAGCGGCAG...ACTGAGATTGTGTTCTGCATAATATTTGGAAGGCTTCCATTTCCATTGAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp AAGCACACCCAAGGCTGTGCTTGCTCAGGTATTACATTTTCTCCTGGGAGTTGGGAGTCTTTGATCATATaGTCCATTCATCTCCAGTCC +
Preference number: 5 (lower is better)
Translates to: KHTQGCACSGITFSPGSWESLII*SIHLQS
Trigger: GGACTGGAGATGAATGGACAATATGATCAAAGACTC...CCAACTCCCAGGAGAAAATGTAATACCTGAGCAAGCACAGCCTTGGGTGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp GCCTCTAATAAGGTGTCAACAGCGGACAGGTGTGCAGAAATGACACAAAATGGGCTCCTAACCTGGTTTTaGATACTTCATGGGCCTGAT +
Preference number: 5 (lower is better)
Translates to: ASNKVSTADRCAEMTQNGLLTWF*ILHGPD
Trigger: ATCAGGCCCATGAAGTATCAAAAACCAGGTTAGGAG...CCCATTTTGTGTCATTTCTGCACACCTGTCCGCTGTTGACACCTTATTAGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp TCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCCTCTCACTCATGGATTaGTTTTCAATGGAAATGGAA +
Preference number: 5 (lower is better)
Translates to: SRTSCNPVVTKSMRARSSLSLMD*FSMEME
Trigger: TTCCATTTCCATTGAAAACAAATCCATGAGTGAGAG...GGAGGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp AAGCACACCCAAGGCTGTGCTTGCTCAGGTATTACATTTTCTCCTGGGAGTTGGATCCCCAAAACCTATTaGTGTCATTGCGAGCAAACA +
Preference number: 5 (lower is better)
Translates to: KHTQGCACSGITFSPGSWIPKTY*CHCEQT
Trigger: TGTTTGCTCGCAATGACACAAATAGGTTTTGGGGAT...CCAACTCCCAGGAGAAAATGTAATACCTGAGCAAGCACAGCCTTGGGTGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp AAGCACACCCAAGGCTGTGCTTGCTCAGGTATTACATTTTCTCCTGGGAGTTGGATTCATACTAGGATGTaGACTGCCTTCACTCAGGTT +
Preference number: 5 (lower is better)
Translates to: KHTQGCACSGITFSPGSWIHTRM*TAFTQV
Trigger: AACCTGAGTGAAGGCAGTCAACATCCTAGTATGAAT...CCAACTCCCAGGAGAAAATGTAATACCTGAGCAAGCACAGCCTTGGGTGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp GTGATGCTGACATTAACAAGAGGCAGTCACAGCAGTGTGTCTCACATGGGCTCCATGGATCTGAAATTGTaGGAGCTGTTAAACCAAGCA +
Preference number: 5 (lower is better)
Translates to: VMLTLTRGSHSSVSHMGSMDLKL*ELLNQA
Trigger: TGCTTGGTTTAACAGCTCCAACAATTTCAGATCCAT...GGAGCCCATGTGAGACACACTGCTGTGACTGCCTCTTGTTAATGTCAGCATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp TGTGGTCACAAAGAGTATGCGTGCAAGGTCCTCCACCTCCAGTGCCATCATTTCACCACAGAAAGTTACTaGAGATTCAAAAATCTGGCG +
Preference number: 5 (lower is better)
Translates to: CGHKEYACKVLHLQCHHFTTESY*RFKNLA
Trigger: CGCCAGATTTTTGAATCTCAAGTAACTTTCTGTGGT...GAAATGATGGCACTGGAGGTGGAGGACCTTGCACGCATACTCTTTGTGACCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp CATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGAGAGTTACAGTGCCCTaGTATGAAAATCCTCTGACT +
Preference number: 5 (lower is better)
Translates to: HLSRTSCNPVVTKSMRARRVTVP*YENPLT
Trigger: AGTCAGAGGATTTTCATACAAGGGCACTGTAACTCT...CCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp GGGCATTTCCCAAGTATGGTGAGCCAAGCTCCCTGTGATTCTTCTGGCACTAAATACTTGCCTCTAACATaGAAGAGTCTTCCAACTGGA +
Preference number: 5 (lower is better)
Translates to: GHFPSMVSQAPCDSSGTKYLPLT*KSLPTG
Trigger: TCCAGTTGGAAGACTCTTCAATGTTAGAGGCAAGTA...TTTAGTGCCAGAAGAATCACAGGGAGCTTGGCTCACCATACTTGGGAAATGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CAA 90 bp TTCACGCTCTTCACGTGCAGCAAGTCCTGTGATGGCAAACACCAGTTATTACGGATAAATACCCGACTTTaGACATCCTTGAGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: FTLFTCSKSCDGKHQLLRINTRL*TSLSLG
Trigger: GCCCAAACTCAAGGATGTCAAAAGTCGGGTATTTAT...CCGTAATAACTGGTGTTTGCCATCACAGGACTTGCTGCACGTGAAGAGCGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558711.1
CDS TCA 90 bp GTAAACCCAAATAGGGATTTCATAGAGAACTTACTCAGGATCGACTaGGCCACTTCAAGTCCGGCTTCTGGTTTTGCTGGTTCTGACACA +
Preference number: 5 (lower is better)
Translates to: VNPNRDFIENLLRID*ATSSPASGFAGSDT
Trigger: TGTGTCAGAACCAGCAAAACCAGAAGCCGGACTTGAAGTGGCTCAGTCGATCCTGAGTAAGTTCTCTATGAAATCCCTATTTGGGTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS GCA 90 bp TCAGTAATGCCCTTGGTGGAAGTTCTGACTTGTGTTACCTTCTCCTaGGCTCTCAGTTTATCCACTCCATCTGCTCTTAATTTACAGGAC +
Preference number: 5 (lower is better)
Translates to: SVMPLVEVLTCVTFS*ALSLSTPSALNLQD
Trigger: GTCCTGTAAATTAAGAGCAGATGGAGTGGATAAACTGAGAGCGCAGGAGAAGGTAACACAAGTCAGAACTTCCACCAAGGGCATTACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558197.1
ENST00000559150.1
CDS-3UTR CAA 90 bp CAAAAGCATTACTCGAAGACAAACAACAAATCAGATTACAGCTCTAGAGAACCATCTGGCGACTTTGGCTaGACCTCACCACCCTGGGTT +
Preference number: 5 (lower is better)
Translates to: QKHYSKTNNKSDYSSREPSGDFG*TSPPWV
Trigger: AACCCAGGGTGGTGAGGTCAAGCCAAAGTCGCCAGA...TGGTTCTCTAGAGCTGTAATCTGATTTGTTGTTTGTCTTCGAGTAATGCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CAA 90 bp TTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATTTCTCATGTCTCATCTaGCGCTTGAGAGCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: FSDTSFKNVLQPCGHKEYFSCLI*RLRASS
Trigger: GCTGGAAGCTCTCAAGCGCAAGATGAGACATGAGAA...ATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334528.13
CDS-3UTR CAA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTTTTCTTCTGTGTCTTTaGTCTTTGGGGGTGGCCAGA +
Preference number: 5 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSFLLCL*SLGVAR
Trigger: TCTGGCCACCCCCAAAGACAAAAGACACAGAAGAAA...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp ACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTGGTTTTCGAGGACATaGACTGGAAGAAGAGCCAAG +
Preference number: 5 (lower is better)
Translates to: TFSDTSFKNVLQPCGHKEWFSRT*TGRRAK
Trigger: CTTGGCTCTTCTTCCAGTCAATGTCCTCGAAAACCA...CTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp ACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCACAAGATTCCCACAGTTaGAGATCGTTTTCCATCCAA +
Preference number: 5 (lower is better)
Translates to: THLSRTSCNPVVTKSMRAQDSHS*RSFSIQ
Trigger: TTGGATGGAAAACGATCTCAAACTGTGGGAATCTTG...TGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp AGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGCGACTTTTGACATCCTaGAGTTTGGGCAGAATTTCT +
Preference number: 5 (lower is better)
Translates to: SDTSFKNVLQPCGHKEYARLLTS*SLGRIS
Trigger: AGAAATTCTGCCCAAACTCAAGGATGTCAAAAGTCG...CGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp CTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGTCCTTAAATAGTTTTCCATaGTTCCTGCGGCTTAATGAG +
Preference number: 5 (lower is better)
Translates to: LSRTSCNPVVTKSMRARSLNSFP*FLRLNE
Trigger: CTCATTAAGCCGCAGGAACAATGGAAAACTATTTAA...GGACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCAAGATGCTGCAGGATTTaGCTGCAACAGGATCAAAAC +
Preference number: 5 (lower is better)
Translates to: LFSNPISLATQTGFICVARCCRI*LQQDQN
Trigger: GTTTTGATCCTGTTGCAGCAAAATCCTGCAGCATCT...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp ACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCATCCTTGCATGGTAACTaGTTCTCCAGGATGAAGTTT +
Preference number: 5 (lower is better)
Translates to: THLSRTSCNPVVTKSMRASLHGN*FSRMKF
Trigger: AAACTTCATCCTGGAGAACAAGTTACCATGCAAGGA...TGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTCACCCAAGGCTGTGCTaGCTCAGGTATTACATTTTC +
Preference number: 5 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSHPRLC*LRYYIF
Trigger: GAAAATGTAATACCTGAGCAAGCACAGCCTTGGGTG...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCACGAGGCAGGCAAACCTaGCTTTGTAGAAATAGGTAT +
Preference number: 5 (lower is better)
Translates to: LFSNPISLATQTGFICVARGRQT*LCRNRY
Trigger: ATACCTATTTCTACAAAGCAAGGTTTGCCTGCCTCG...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp TTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATAGGCTGAGAAGAGGTTaGCAGCTTCTACTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: FSDTSFKNVLQPCGHKEYRLRRG*QLLLSL
Trigger: CAAGGACAGTAGAAGCTGCAAACCTCTTCTCAGCCT...ATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp ACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTTCCAGGCAGCTGGATaGTTTCTCTCTATAGCTGGA +
Preference number: 5 (lower is better)
Translates to: TFSDTSFKNVLQPCGHKEFQAAG*FLSIAG
Trigger: TCCAGCTATAGAGAGAAACAATCCAGCTGCCTGGAA...CTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp GACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCCTTCATGTTTCCAAGTaGTTAACTACACGTTTCCCA +
Preference number: 5 (lower is better)
Translates to: DTSFKNVLQPCGHKEYACLHVSK*LTTRFP
Trigger: TGGGAAACGTGTAGTTAACAACTTGGAAACATGAAG...GCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGAGTCTTCTTTGCATTTaGCTGGCCCAATGTCATCAA +
Preference number: 5 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLSLLCI*LAQCHQ
Trigger: TTGATGACATTGGGCCAGCAAAATGCAAAGAAGACT...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp ACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAAAGCAGGTACACGTTaGCCAAGGACATTAACAAAC +
Preference number: 5 (lower is better)
Translates to: THLSRTSCNPVVTKSMRAKAGTR*PRTLTN
Trigger: GTTTGTTAATGTCCTTGGCAAACGTGTACCTGCTTT...TGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGGGACTAACCTTTCATTaGGGAAAGACAGATCTGGAA +
Preference number: 5 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLGLTFH*GKTDLE
Trigger: TTCCAGATCTGTCTTTCCCAAATGAAAGGTTAGTCC...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp TTCCCAAGTATGGTGAGCCAAGCTCCCTGTGATTCTTCTGGCACTAAAAGGGTTAGAGTTACAGTGCCCTaGTATGAAAATCCTCTGACT +
Preference number: 5 (lower is better)
Translates to: FPSMVSQAPCDSSGTKRVRVTVP*YENPLT
Trigger: AGTCAGAGGATTTTCATACAAGGGCACTGTAACTCT...AACCCTTTTAGTGCCAGAAGAATCACAGGGAGCTTGGCTCACCATACTTGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CAA 90 bp GGAAGAACTATGCCTGGAGCATATGCTTCCATCACCACATCAGTGACTTCAGTCCTCTCTGTTGTGAGTTaGTACAGCTCAGTTAGAATG +
Preference number: 5 (lower is better)
Translates to: GRTMPGAYASITTSVTSVLSVVS*YSSVRM
Trigger: CATTCTAACTGAGCTGTACAAACTCACAACAGAGAG...GACTGAAGTCACTGATGTGGTGATGGAAGCATATGCTCCAGGCATAGTTCTTCC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CAA 90 bp TTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGAACAGATCTTGTCCTaGCCCATCAGAGGAGCTGAT +
Preference number: 5 (lower is better)
Translates to: FSDTSFKNVLQPCGHKEYEQILS*PIRGAD
Trigger: ATCAGCTCCTCTGATGGGCAAGGACAAGATCTGTTC...ATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp GGAAGAACTATGCCTGGAGCATATGCTTCCATCACCACATCAGTGACTTCAGTCCCTGGGAATTACTACTaGCCTCTAACATTGAAGAGT +
Preference number: 5 (lower is better)
Translates to: GRTMPGAYASITTSVTSVPGNYY*PLTLKS
Trigger: ACTCTTCAATGTTAGAGGCAAGTAGTAATTCCCAGG...GACTGAAGTCACTGATGTGGTGATGGAAGCATATGCTCCAGGCATAGTTCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CAA 90 bp ATCAGGAAGAACTATGCCTGGAGCATATGCTTCCATCACCACATCAGTGACTTCATACTCCACAAAGGCTaGGGAACATTCCACATCAGT +
Preference number: 5 (lower is better)
Translates to: IRKNYAWSICFHHHISDFILHKG*GTFHIS
Trigger: ACTGATGTGGAATGTTCCCAAGCCTTTGTGGAGTAT...GAAGTCACTGATGTGGTGATGGAAGCATATGCTCCAGGCATAGTTCTTCCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CAA 90 bp CGACTTTTGACATCCTTGAGTTTGGGCAGAATTTCTAAGCTATATCCATCGGCTAGGCTGTCGGGAGGCTaGGTACCAACAGAATTAACA +
Preference number: 5 (lower is better)
Translates to: RLLTSLSLGRISKLYPSARLSGG*VPTELT
Trigger: TGTTAATTCTGTTGGTACCAAGCCTCCCGACAGCCT...AGCCGATGGATATAGCTTAGAAATTCTGCCCAAACTCAAGGATGTCAAAAGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558711.1
CDS GCA 90 bp AGGAAGAGATTCATTCCCGGGTCCCTAGCTTCCTTTCACATTACCTaGTTCAGTGTACTTCAGTCCCACTTTTTCTTCTGTGTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: RKRFIPGSLASFHIT*FSVLQSHFFFCVFC
Trigger: ACAAAAGACACAGAAGAAAAAGTGGGACTGAAGTACACTGAAGCAGGTAATGTGAAAGGAAGCTAGGGACCCGGGAATGAATCTCTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558197.1
ENST00000559150.1
CDS GCA 90 bp GCCCGAAGTTCAAACTGTGCCTGCAGGTTTTCAATTTCTTCTTTGTaGTCCCTCTTCAAGTGTAAAATAGCAGCTTGGTATTCTGGAGGT +
Preference number: 5 (lower is better)
Translates to: ARSSNCACRFSISSL*SLFKCKIAAWYSGG
Trigger: ACCTCCAGAATACCAAGCTGCTATTTTACACTTGAAGAGGGAGCACAAAGAAGAAATTGAAAACCTGCAGGCACAGTTTGAACTTCGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561249.5
CDS CCA 90 bp TTTTATAAGGTTAGAAGCACAGGAGATGCTTACAGTTCTTATGACTaGTTCCTGAAAGTGCTGCTGAAGATCCCAATGGAAGGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: FYKVRSTGDAYSSYD*FLKVLLKIPMEGWR
Trigger: CCTCCAGCCTTCCATTGGGATCTTCAGCAGCACTTTCAGGAACCAGTCATAAGAACTGTAAGCATCTCCTGTGCTTCTAACCTTATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CAA 90 bp CAGGTTTCCAGAGAGTTAGGTTGCTTTAAAGTTGGCCATGCATTAAATAAAGCTTTGGGCATGTCAATGTaGAGCAGCAGAGAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: QVSRELGCFKVGHALNKALGMSM*SSRESC
Trigger: GCAGCTCTCTCTGCTGCTCAACATTGACATGCCCAA...AGCTTTATTTAATGCATGGCCAACTTTAAAGCAACCTAACTCTCTGGAAACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CAA 90 bp TGGGTTAAACAGAAGTTTAGCCCTATGCTACTTCTATGCTTCAATTACCTAGAACTGTGGTCAGGACTTTaGGAATCAGAGGGGCCATCC +
Preference number: 5 (lower is better)
Translates to: WVKQKFSPMLLLCFNYLELWSGL*ESEGPS
Trigger: GGATGGCCCCTCTGATTCCAAAAGTCCTGACCACAG...TTCTAGGTAATTGAAGCATAGAAGTAGCATAGGGCTAAACTTCTGTTTAACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CAA 90 bp AAACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACTGGTTTTCGAGGACATaGACTGGAAGAAGAGCCAAG +
Preference number: 5 (lower is better)
Translates to: KQTFSDTSFKNVLQPCGHWFSRT*TGRRAK
Trigger: CTTGGCTCTTCTTCCAGTCAATGTCCTCGAAAACCA...GTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTACGGAGTCATCCACATaGAAAATGGCCTGTTGGATA +
Preference number: 5 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSTESST*KMACWI
Trigger: TATCCAACAGGCCATTTTCAATGTGGATGACTCCGT...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCACGACTTTTGACATCCTaGAGTTTGGGCAGAATTTCT +
Preference number: 5 (lower is better)
Translates to: LFSNPISLATQTGFICVARLLTS*SLGRIS
Trigger: AGAAATTCTGCCCAAACTCAAGGATGTCAAAAGTCG...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTGTCTTCAAACTTGACTaGGGAGGCCAGAAAGAAATC +
Preference number: 5 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSVFKLD*GGQKEI
Trigger: GATTTCTTTCTGGCCTCCCAAGTCAAGTTTGAAGAC...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp ACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGGTCTTCAAACTTGACTaGGGAGGCCAGAAAGAAATC +
Preference number: 5 (lower is better)
Translates to: TFSDTSFKNVLQPCGHKEVFKLD*GGQKEI
Trigger: GATTTCTTTCTGGCCTCCCAAGTCAAGTTTGAAGAC...CTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp AACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAATGAGGTCTTCAAACTaGACTTGGGAGGCCAGAAAG +
Preference number: 5 (lower is better)
Translates to: NKHLVTHLSRTSCNPVVTMRSSN*TWEARK
Trigger: CTTTCTGGCCTCCCAAGTCAAGTTTGAAGACCTCAT...TGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp TTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGAAGAACTCCTCTAGTTaGTCCTTGAAAGGCTGGAGA +
Preference number: 5 (lower is better)
Translates to: LVTHLSRTSCNPVVTKSMKNSSS*SLKGWR
Trigger: TCTCCAGCCTTTCAAGGACAAACTAGAGGAGTTCTT...CATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp ACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTGTAACGACAAAGACTaGAACTCTCCCAAGGCAACT +
Preference number: 5 (lower is better)
Translates to: TFSDTSFKNVLQPCGHKECNDKD*NSPKAT
Trigger: AGTTGCCTTGGGAGAGTTCAAGTCTTTGTCGTTACA...CTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp TTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGAGATGCTGCAGGATTTaGCTGCAACAGGATCAAAAC +
Preference number: 5 (lower is better)
Translates to: LVTHLSRTSCNPVVTKSMRCCRI*LQQDQN
Trigger: GTTTTGATCCTGTTGCAGCAAAATCCTGCAGCATCT...CATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCATCCTTGCATGGTAACTaGTTCTCCAGGATGAAGTTT +
Preference number: 5 (lower is better)
Translates to: LFSNPISLATQTGFICVASLHGN*FSRMKF
Trigger: AAACTTCATCCTGGAGAACAAGTTACCATGCAAGGA...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp GAAAGACACCATCATCAACATAAGGATTCAAAAGGCAACTGTTGGGCAGTAGGATGCTGTGAGTTGCATTaGCTCTCCTGTCTGGAAACT +
Preference number: 5 (lower is better)
Translates to: ERHHHQHKDSKGNCWAVGCCELH*LSCLET
Trigger: AGTTTCCAGACAGGAGAGCAAATGCAACTCACAGCA...TCCTACTGCCCAACAGTTGCCTTTTGAATCCTTATGTTGATGATGGTGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp AAACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACTGCTGTGAGTTGCATTaGCTCTCCTGTCTGGAAACT +
Preference number: 5 (lower is better)
Translates to: KQTFSDTSFKNVLQPCGHCCELH*LSCLET
Trigger: AGTTTCCAGACAGGAGAGCAAATGCAACTCACAGCA...GTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp AGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGGATCCGTTCTTTTGGTaGTCTTCAGAGTTAAGTGAA +
Preference number: 5 (lower is better)
Translates to: SDTSFKNVLQPCGHKEYADPFFW*SSELSE
Trigger: TTCACTTAACTCTGAAGACAACCAAAAGAACGGATC...CGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp TTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGAGGCAGGCAAACCTaGCTTTGTAGAAATAGGTAT +
Preference number: 5 (lower is better)
Translates to: LVTHLSRTSCNPVVTKSMRGRQT*LCRNRY
Trigger: ATACCTATTTCTACAAAGCAAGGTTTGCCTGCCTCG...CATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp CATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCAAGGACTTCCTTGAACAAATaGTCATTGACCTTTACTGAG +
Preference number: 5 (lower is better)
Translates to: HLSRTSCNPVVTKSMRARTSLNK*SLTFTE
Trigger: CTCAGTAAAGGTCAATGACAATTTGTTCAAGGAAGT...CCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp AAGCACACCCAAGGCTGTGCTTGCTCAGGTATTACATTTTCTCCTGGGAGTTGGAACCTATTTGTGTCATaGCGAGCAAACAGAAGAATT +
Preference number: 5 (lower is better)
Translates to: KHTQGCACSGITFSPGSWNLFVS*RANRRI
Trigger: AATTCTTCTGTTTGCTCGCAATGACACAAATAGGTT...CCAACTCCCAGGAGAAAATGTAATACCTGAGCAAGCACAGCCTTGGGTGTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp GTGAGCCAAGCTCCCTGTGATTCTTCTGGCACTAAAAGGGTTTACTTTGAATCACTAATTATTCATGCCTaGGAGATGCCGGTTTGTGGT +
Preference number: 5 (lower is better)
Translates to: VSQAPCDSSGTKRVYFESLIIHA*EMPVCG
Trigger: ACCACAAACCGGCATCTCCAAGGCATGAATAATTAG...TGATTCAAAGTAAACCCTTTTAGTGCCAGAAGAATCACAGGGAGCTTGGCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CAA 90 bp ACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGCTAATTATTCATGCCTaGGAGATGCCGGTTTGTGGT +
Preference number: 5 (lower is better)
Translates to: TFSDTSFKNVLQPCGHKELIIHA*EMPVCG
Trigger: ACCACAAACCGGCATCTCCAAGGCATGAATAATTAG...CTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp GTTCCCTTAAATAGTTTTCCATTGTTCCTGCGGCTTAATGAGGGACTTCTTAAATTCAGACAAACCTGTTaGCTGATGCTCCAGCCCGCT +
Preference number: 5 (lower is better)
Translates to: VPLNSFPLFLRLNEGLLKFRQTC*LMLQPA
Trigger: AGCGGGCTGGAGCATCAGCAAACAGGTTTGTCTGAA...TTTAAGAAGTCCCTCATTAAGCCGCAGGAACAATGGAAAACTATTTAAGGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616417.5
CDS-3UTR CAA 90 bp AGACAGAGGATACAAATCAAAGGTACTATCTGGGGAACTCCCTCCCTCATGCCTTCATGGGCACAAGAATaGATCAAGAGATTCTCAGTT +
Preference number: 5 (lower is better)
Translates to: RQRIQIKGTIWGTPSLMPSWAQE*IKRFSV
Trigger: AACTGAGAATCTCTTGATCAATTCTTGTGCCCATGA...AGGCATGAGGGAGGGAGTTCCCCAGATAGTACCTTTGATTTGTATCCTCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CAA 90 bp TGGGTTAAACAGAAGTTTAGCCCTATGCTACTTCTATGCTTCAATTACCTAGAATGCCCTCCTTCCGGTTaGTGCGATGATGTGTTCCAG +
Preference number: 5 (lower is better)
Translates to: WVKQKFSPMLLLCFNYLECPPSG*CDDVFQ
Trigger: CTGGAACACATCATCGCACAAACCGGAAGGAGGGCA...TTCTAGGTAATTGAAGCATAGAAGTAGCATAGGGCTAAACTTCTGTTTAACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS GCA 90 bp GCCCGAAGTTCAAACTGTGCCTGCAGGTTTTCAATTTCTTCTTTGTaGTCCCTCTTCAAGTGTAAAATAGCAGCTTGGTATTCTGCTTCA +
Preference number: 5 (lower is better)
Translates to: ARSSNCACRFSISSL*SLFKCKIAAWYSAS
Trigger: TGAAGCAGAATACCAAGCTGCTATTTTACACTTGAAGAGGGAGCACAAAGAAGAAATTGAAAACCTGCAGGCACAGTTTGAACTTCGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000616417.5
ENST00000672206.1
CDS-3UTR CAA 90 bp TTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATACGGAGTCATCCACATaGAAAATGGCCTGTTGGATA +
Preference number: 5 (lower is better)
Translates to: FSDTSFKNVLQPCGHKEYTESST*KMACWI
Trigger: TATCCAACAGGCCATTTTCAATGTGGATGACTCCGT...ATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp TTTCCAAAAGCCAAGATGAGAGCTAAAATATCCTTCACGCTCTTCACGTGCAGCCGACTTTTGACATCCTaGAGTTTGGGCAGAATTTCT +
Preference number: 5 (lower is better)
Translates to: FPKAKMRAKISFTLFTCSRLLTS*SLGRIS
Trigger: AGAAATTCTGCCCAAACTCAAGGATGTCAAAAGTCG...GCTGCACGTGAAGAGCGTGAAGGATATTTTAGCTCTCATCTTGGCTTTTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558711.1
CDS-3UTR CAA 90 bp TTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATAGGCTAGCAGTGGGATaGATTTTCTTTGTCTCCACT +
Preference number: 5 (lower is better)
Translates to: FSDTSFKNVLQPCGHKEYRLAVG*IFFVST
Trigger: AGTGGAGACAAAGAAAATCAATCCCACTGCTAGCCT...ATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp ACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCGTGCACAAAGTGGGCTGTATTaGTCTAACTCTCAAATTAAG +
Preference number: 5 (lower is better)
Translates to: THLSRTSCNPVVTKSMRAQSGLY*SNSQIK
Trigger: CTTAATTTGAGAGTTAGACAAATACAGCCCACTTTG...TGCACGCATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTCAATTTGCTGTGCTGTaGTATGCAATGATCTGCATC +
Preference number: 5 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSQFAVL*YAMICI
Trigger: GATGCAGATCATTGCATACAACAGCACAGCAAATTG...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp GTTAAACCAAGCACAGACCAGTTTCACTGGGGTACCTGCTTTCCCAGTACATTGAACCTATTTGTGTCATaGCGAGCAAACAGAAGAATT +
Preference number: 5 (lower is better)
Translates to: VKPSTDQFHWGTCFPSTLNLFVS*RANRRI
Trigger: AATTCTTCTGTTTGCTCGCAATGACACAAATAGGTT...CAATGTACTGGGAAAGCAGGTACCCCAGTGAAACTGGTCTGTGCTTGGTTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp ACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTTCTTGCTCATCCCATaGCTTGCAAACTCACAAGAT +
Preference number: 5 (lower is better)
Translates to: TFSDTSFKNVLQPCGHKEFLLIP*LANSQD
Trigger: ATCTTGTGAGTTTGCAAGCAATGGGATGAGCAAGAA...CTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp CTCTTTTCAAATCCCATCAGCTTGGCCACACAGACTGGTTTCATCTGTGTTGCAATGGATCTGAAATTGTaGGAGCTGTTAAACCAAGCA +
Preference number: 5 (lower is better)
Translates to: LFSNPISLATQTGFICVAMDLKL*ELLNQA
Trigger: TGCTTGGTTTAACAGCTCCAACAATTTCAGATCCAT...TGCAACACAGATGAAACCAGTCTGTGTGGCCAAGCTGATGGGATTTGAAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS CCA 90 bp TCTTCTGTTGAGTTGTGTCTTTGGAGAATAAATACTCAAATTCACTaGGGTCCCGAATGTCAGGTTCTTCTAAGGAGTCCCATAAGGTTG +
Preference number: 5 (lower is better)
Translates to: SSVELCLWRINTQIH*GPECQVLLRSPIRL
Trigger: CAACCTTATGGGACTCCTTAGAAGAACCTGACATTCGGGACCCCAGTGAATTTGAGTATTTATTCTCCAAAGACACAACTCAACAGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
ENST00000672206.1
CDS CCA 90 bp GATCTGAAGATTATGCACTGGGCACGTTCAGCAAAATTAGGAATCTaGGCTAACTCATGTAAAAATTGCTCAGGTTTATCCAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: DLKIMHWARSAKLGI*ANSCKNCSGLSSSF
Trigger: GAAGCTGCTGGATAAACCTGAGCAATTTTTACATGAGTTAGCCCAGATTCCTAATTTTGCTGAACGTGCCCAGTGCATAATCTTCAGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334528.13
ENST00000560317.5
ENST00000561249.5
ENST00000616417.5
ENST00000672206.1
CDS CCA 90 bp AAGGAGGTGATACCCTCAGAAAAGACAGATCTGAAGATTATGCACTaGGCACGTTCAGCAAAATTAGGAATCTGGGCTAACTCATGTAAA +
Preference number: 5 (lower is better)
Translates to: KEVIPSEKTDLKIMH*ARSAKLGIWANSCK
Trigger: TTTACATGAGTTAGCCCAGATTCCTAATTTTGCTGAACGTGCCCAGTGCATAATCTTCAGATCTGTCTTTTCTGAGGGTATCACCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334528.13
ENST00000558711.1
ENST00000560317.5
ENST00000561249.5
ENST00000616417.5
ENST00000672206.1
CDS-3UTR CAA 90 bp CAAAAGCATTACTCGAAGACAAACAACAAATCAGATTACAGCTCTAGAGAACCATTCTCATGTCTCATCTaGCGCTTGAGAGCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: QKHYSKTNNKSDYSSREPFSCLI*RLRASS
Trigger: GCTGGAAGCTCTCAAGCGCAAGATGAGACATGAGAA...TGGTTCTCTAGAGCTGTAATCTGATTTGTTGTTTGTCTTCGAGTAATGCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CAA 90 bp TGGGTTAAACAGAAGTTTAGCCCTATGCTACTTCTATGCTTCAATTACCTAGAATCCGCTGGCTTAGAATaGGACCGTTCAAACACAGCT +
Preference number: 5 (lower is better)
Translates to: WVKQKFSPMLLLCFNYLESAGLE*DRSNTA
Trigger: AGCTGTGTTTGAACGGTCCAATTCTAAGCCAGCGGA...TTCTAGGTAATTGAAGCATAGAAGTAGCATAGGGCTAAACTTCTGTTTAACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CAA 90 bp AACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACACAATTTGCTGTGCTGTaGTATGCAATGATCTGCATC +
Preference number: 5 (lower is better)
Translates to: NKHLVTHLSRTSCNPVVTQFAVL*YAMICI
Trigger: GATGCAGATCATTGCATACAACAGCACAGCAAATTG...TGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp TTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGCTTTCCAACAAAGCATaGATCTGGAAGTTCAGTAGA +
Preference number: 5 (lower is better)
Translates to: LVTHLSRTSCNPVVTKSMLSNKA*IWKFSR
Trigger: TCTACTGAACTTCCAGATCAATGCTTTGTTGGAAAG...CATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp GTTCCCTTAAATAGTTTTCCATTGTTCCTGCGGCTTAATGAGGGACTTCTTAAACAAGGGCACTCACATTaGCCTAATACAGATGCCTTG +
Preference number: 5 (lower is better)
Translates to: VPLNSFPLFLRLNEGLLKQGHSH*PNTDAL
Trigger: CAAGGCATCTGTATTAGGCAAATGTGAGTGCCCTTG...TTTAAGAAGTCCCTCATTAAGCCGCAGGAACAATGGAAAACTATTTAAGGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp GTGAGCCAAGCTCCCTGTGATTCTTCTGGCACTAAAAGGGTTTACTTTGAATCAGAGACAATCAAAGCTTaGACAGTAGTATTAGGGGTT +
Preference number: 5 (lower is better)
Translates to: VSQAPCDSSGTKRVYFESETIKA*TVVLGV
Trigger: AACCCCTAATACTACTGTCAAAGCTTTGATTGTCTC...TGATTCAAAGTAAACCCTTTTAGTGCCAGAAGAATCACAGGGAGCTTGGCTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320930.7
CDS-3UTR CAA 90 bp ATTATGGAAAAACCTACTGAACCACCCAACTTTGATCTGTTCATGTCTATCAATGGTGGAAGTTCTGACTaGTGTTACCTTCTCCTGCGC +
Preference number: 5 (lower is better)
Translates to: IMEKPTEPPNFDLFMSINGGSSD*CYLLLR
Trigger: GCGCAGGAGAAGGTAACACAAGTCAGAACTTCCACC...ATTGATAGACATGAACAGATCAAAGTTGGGTGGTTCAGTAGGTTTTTCCATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CAA 90 bp ATTATGGAAAAACCTACTGAACCACCCAACTTTGATCTGTTCATGTCTATCAATCCCTTCGGTTCAGTTTaGGGCATGTCAATGTTGAGC +
Preference number: 5 (lower is better)
Translates to: IMEKPTEPPNFDLFMSINPFGSV*GMSMLS
Trigger: GCTCAACATTGACATGCCCAAAACTGAACCGAAGGG...ATTGATAGACATGAACAGATCAAAGTTGGGTGGTTCAGTAGGTTTTTCCATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CAA 90 bp CAAAAGCATTACTCGAAGACAAACAACAAATCAGATTACAGCTCTAGAGAACCATTTCTTCTGTGTCTTTaGTCTTTGGGGGTGGCCAGA +
Preference number: 5 (lower is better)
Translates to: QKHYSKTNNKSDYSSREPFLLCL*SLGVAR
Trigger: TCTGGCCACCCCCAAAGACAAAAGACACAGAAGAAA...TGGTTCTCTAGAGCTGTAATCTGATTTGTTGTTTGTCTTCGAGTAATGCTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CAA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTTTTTCAATTTCTTCTTaGTGCTCCCTCTTCAAGTGT +
Preference number: 5 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSFSISS*CSLFKC
Trigger: ACACTTGAAGAGGGAGCACAAAGAAGAAATTGAAAA...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp TTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTATGATCTTATGCTCTTTTTaGGCTTTTTGGAAGAACTCC +
Preference number: 5 (lower is better)
Translates to: LVTHLSRTSCNPVVTKSMILCSF*AFWKNS
Trigger: GGAGTTCTTCCAAAAAGCCAAAAAAGAGCATAAGAT...CATACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp TGTTTTCAATGGAAATGGAAGCCTTCCAAATATTATGCAGAACACAATCTCAGTATTTTCTCCTGGGAGTaGGGGTGCAGAATCTCTGCT +
Preference number: 5 (lower is better)
Translates to: CFQWKWKPSKYYAEHNLSIFSWE*GCRISA
Trigger: AGCAGAGATTCTGCACCCCAACTCCCAGGAGAAAAT...ACTGAGATTGTGTTCTGCATAATATTTGGAAGGCTTCCATTTCCATTGAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTCAAAGTGGGCTGTATTaGTCTAACTCTCAAATTAAG +
Preference number: 5 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSQSGLY*SNSQIK
Trigger: CTTAATTTGAGAGTTAGACAAATACAGCCCACTTTG...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp TGTTTTCAATGGAAATGGAAGCCTTCCAAATATTATGCAGAACACAATCTCAGTTTCAAAAGGCAACTGTaGGGCAGTAGGACCATCACC +
Preference number: 5 (lower is better)
Translates to: CFQWKWKPSKYYAEHNLSFKRQL*GSRTIT
Trigger: GGTGATGGTCCTACTGCCCAACAGTTGCCTTTTGAA...ACTGAGATTGTGTTCTGCATAATATTTGGAAGGCTTCCATTTCCATTGAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp AAACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACCTTTCCAACAAAGCATaGATCTGGAAGTTCAGTAGA +
Preference number: 5 (lower is better)
Translates to: KQTFSDTSFKNVLQPCGHLSNKA*IWKFSR
Trigger: TCTACTGAACTTCCAGATCAATGCTTTGTTGGAAAG...GTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp CATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAAAGAGTCTCTCACTCATGGATTaGTTTTCAATGGAAATGGAA +
Preference number: 5 (lower is better)
Translates to: HLVTHLSRTSCNPVVTKSLSLMD*FSMEME
Trigger: TTCCATTTCCATTGAAAACAAATCCATGAGTGAGAG...ACTCTTTGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS CCA 90 bp GTCTCCAGATCAACCACGGAGTCATCCACATTGAAAATGGCCTGTTaGATATCCTTCATTTCTAAATGTAAACTAGATATCAAGATTCCC +
Preference number: 5 (lower is better)
Translates to: VSRSTTESSTLKMAC*ISFISKCKLDIKIP
Trigger: GGGAATCTTGATATCTAGTTTACATTTAGAAATGAAGGATATCCAACAGGCCATTTTCAATGTGGATGACTCCGTGGTTGATCTGGAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334528.13
ENST00000558628.1
ENST00000560317.5
ENST00000561249.5
ENST00000616417.5
ENST00000672206.1
CDS-3UTR CAA 90 bp ATTATGGAAAAACCTACTGAACCACCCAACTTTGATCTGTTCATGTCTATCAATTGGCCTTCGGATCAGTaGCTTTCTTCTCACTCTTCA +
Preference number: 5 (lower is better)
Translates to: IMEKPTEPPNFDLFMSINWPSDQ*LSSHSS
Trigger: TGAAGAGTGAGAAGAAAGCAACTGATCCGAAGGCCA...ATTGATAGACATGAACAGATCAAAGTTGGGTGGTTCAGTAGGTTTTTCCATAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CAA 90 bp AAACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACTTTTCAATTTCTTCTTaGTGCTCCCTCTTCAAGTGT +
Preference number: 5 (lower is better)
Translates to: KQTFSDTSFKNVLQPCGHFSISS*CSLFKC
Trigger: ACACTTGAAGAGGGAGCACAAAGAAGAAATTGAAAA...GTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp AACAAACATTTAGTGACACATCTTTCAAGAACGTCCTGCAACCCTGTGGTCACAATTGATTACTTCTGGTaGTCTTGCTTTCACTTTCAC +
Preference number: 5 (lower is better)
Translates to: NKHLVTHLSRTSCNPVVTIDYFW*SCFHFH
Trigger: GTGAAAGTGAAAGCAAGACAACCAGAAGTAATCAAT...TGTGACCACAGGGTTGCAGGACGTTCTTGAAAGATGTGTCACTAAATGTTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
CDS-3UTR CAA 90 bp TGTTTTCAATGGAAATGGAAGCCTTCCAAATATTATGCAGAACACAATCTCAGTCCATTATCCCGACTTTaGACATCCTTGAGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: CFQWKWKPSKYYAEHNLSPLSRL*TSLSLG
Trigger: GCCCAAACTCAAGGATGTCAAAAGTCGGGATAATGG...ACTGAGATTGTGTTCTGCATAATATTTGGAAGGCTTCCATTTCCATTGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp GTTCCCTTAAATAGTTTTCCATTGTTCCTGCGGCTTAATGAGGGACTTCTTAAACCCATGGATCTGAAATaGTTGGAGCTGTTAAACCAA +
Preference number: 5 (lower is better)
Translates to: VPLNSFPLFLRLNEGLLKPMDLK*LELLNQ
Trigger: TTGGTTTAACAGCTCCAACAATTTCAGATCCATGGG...TTTAAGAAGTCCCTCATTAAGCCGCAGGAACAATGGAAAACTATTTAAGGGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS CCA 90 bp ATTCTGAGCTGGGAGACAAGAAGACAGAAATTGCAGTTCTCCTTTTaGCCTAACAGAAAAATGTTAAGTATCCTTACTGCTCAGGTTTAT +
Preference number: 5 (lower is better)
Translates to: ILSWETRRQKLQFSF*PNRKMLSILTAQVY
Trigger: ATAAACCTGAGCAGTAAGGATACTTAACATTTTTCTGTTAGGCCAAAAGGAGAACTGCAATTTCTGTCTTCTTGTCTCCCAGCTCAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558628.1
CDS-3UTR CAA 90 bp TGTTTTCAATGGAAATGGAAGCCTTCCAAATATTATGCAGAACACAATCTCAGTCCATCTGTTTCTCACTaGCTTCTAGTTGCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: CFQWKWKPSKYYAEHNLSPSVSH*LLVASS
Trigger: TGAAGAGGCAACTAGAAGCAAGTGAGAAACAGATGG...ACTGAGATTGTGTTCTGCATAATATTTGGAAGGCTTCCATTTCCATTGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS-3UTR CAA 90 bp CTATGCTTCAATTACCTAGAACATCCTTATGCTTTCTTTACTGCTGTGTCTGAACTGAACCACCCAACTTaGATCTGTTCATGTCTATCA +
Preference number: 5 (lower is better)
Translates to: LCFNYLEHPYAFFTAVSELNHPT*ICSCLS
Trigger: TGATAGACATGAACAGATCAAAGTTGGGTGGTTCAG...TTCAGACACAGCAGTAAAGAAAGCATAAGGATGTTCTAGGTAATTGAAGCATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CAA 90 bp CAGGTTTCCAGAGAGTTAGGTTGCTTTAAAGTTGGCCATGCATTAAATAAAGCTGATAATAACAGAAGCTaGTCTTTGTGCCCTTGTACT +
Preference number: 5 (lower is better)
Translates to: QVSRELGCFKVGHALNKADNNRS*SLCPCT
Trigger: AGTACAAGGGCACAAAGACAAGCTTCTGTTATTATC...AGCTTTATTTAATGCATGGCCAACTTTAAAGCAACCTAACTCTCTGGAAACCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS-3UTR CAA 90 bp TGTTTTCAATGGAAATGGAAGCCTTCCAAATATTATGCAGAACACAATCTCAGTGATCCGTTCTTTTGGTaGTCTTCAGAGTTAAGTGAA +
Preference number: 5 (lower is better)
Translates to: CFQWKWKPSKYYAEHNLSDPFFW*SSELSE
Trigger: TTCACTTAACTCTGAAGACAACCAAAAGAACGGATC...ACTGAGATTGTGTTCTGCATAATATTTGGAAGGCTTCCATTTCCATTGAAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000616417.5
CDS TCA 72 bp GGGAGGCTGGTCCCGAGTCCCAGCTACTCGGGAGGCTaGGGCAGGAGGATTGCTTACGGCAACAGCCGTGGC +
Preference number: 6 (lower is better)
Translates to: GRLVPSPSYSGG*GRRIAYGNSRG
Trigger: GCCACGGCTGTTGCCGTAAGCAATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTCGGGACCAGCCTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000616417.5
ENST00000674090.1
CDS CAA 90 bp GAGGAGGCGGAGGTGGTAGCGGTGGCCCAGCACTCACAGGTGGCATaGGAGGTGCGGGAGACAAAGATCCAAGTCCTGAGGGGAGGGGCG +
Preference number: 6 (lower is better)
Translates to: EEAEVVAVAQHSQVA*EVRETKIQVLRGGA
Trigger: CGCCCCTCCCCTCAGGACTTGGATCTTTGTCTCCCGCACCTCCAATGCCACCTGTGAGTGCTGGGCCACCGCTACCACCTCCGCCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
ENST00000672206.1
CDS CCA 72 bp CAGGGAGCCGGAGGATCCTGTGATGCTGCTGAGGGCTaGGGAGCCTTGGAGACAGAGGCGAGGGAACAGGTG +
Preference number: 6 (lower is better)
Translates to: QGAGGSCDAAEG*GALETEAREQV
Trigger: CACCTGTTCCCTCGCCTCTGTCTCCAAGGCTCCCCAGCCCTCAGCAGCATCACAGGATCCTCCGGCTCCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS TCA 72 bp TGGAGCCATGAGCCCCAGCCTCAGCTCCCGGGAGGGTaGGCAAGTCGGCTTTGGGTACAAACTCAGCGTGGG +
Preference number: 6 (lower is better)
Translates to: WSHEPQPQLPGG*ASRLWVQTQRG
Trigger: CCCACGCTGAGTTTGTACCCAAAGCCGACTTGCTCACCCTCCCGGGAGCTGAGGCTGGGGCTCATGGCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS TCA 72 bp AGAAATGGAGGCTGTTTCCCCGGCTGGCGACTGCGATaGCCTATCCCCTTGCCGCTCCTTGCCCTGCCGCCT +
Preference number: 6 (lower is better)
Translates to: RNGGCFPGWRLR*PIPLPLLALPP
Trigger: AGGCGGCAGGGCAAGGAGCGGCAAGGGGATAGGTCATCGCAGTCGCCAGCCGGGGAAACAGCCTCCATTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CCA 72 bp AGGCTGAGGCAGGAGGATTGCTTACGGCAACAGCCGTaGCGGCTGCAGCCTCGAAGGATGCTGCGCTCCAGT +
Preference number: 6 (lower is better)
Translates to: RLRQEDCLRQQP*RLQPRRMLRSS
Trigger: ACTGGAGCGCAGCATCCTTCGAGGCTGCAGCCGCCACGGCTGTTGCCGTAAGCAATCCTCCTGCCTCAGCCT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320930.7
ENST00000616417.5
CDS TCA 72 bp TCTCCCACCTGGTCCTGGCTGGGGCGACGCTCTGTCTaGAGACCACCGTTGCCAGCTTCCAGTTTGCTGCTC +
Preference number: 6 (lower is better)
Translates to: SPTWSWLGRRSV*RPPLPASSLLL
Trigger: GAGCAGCAAACTGGAAGCTGGCAACGGTGGTCTTCAGACAGAGCGTCGCCCCAGCCAGGACCAGGTGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS CAA 72 bp GGTACTCCAGGGCCGCTCTGGCTCTCTTGGTCAGCATaGCAGCCCATCTCTTCTCTCCTGGGCGACTCAGGG +
Preference number: 6 (lower is better)
Translates to: GTPGPLWLSWSA*QPISSLLGDSG
Trigger: CCCTGAGTCGCCCAGGAGAGAAGAGATGGGCTGCAATGCTGACCAAGAGAGCCAGAGCGGCCCTGGAGTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS CAA 90 bp CTCACCACCCTGGGTTTGTGGTACTCCAGGGCCGCTCTGGCTCTCTaGGTCAGCATTGCAGCCCATCTCTTCTCTCCTGGGCGACTCAGG +
Preference number: 6 (lower is better)
Translates to: LTTLGLWYSRAALAL*VSIAAHLFSPGRLR
Trigger: CCTGAGTCGCCCAGGAGAGAAGAGATGGGCTGCAATGCTGACCAAGAGAGCCAGAGCGGCCCTGGAGTACCACAAACCCAGGGTGGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS CAA 90 bp CCACTAGACCTCCGAGGCTTTTTGTTCCCGTGGGTGCTCCTCTTATaGAGAGGGCCCACGGGGAGCTCTCCCTGCCAGTCACCAGCACTC +
Preference number: 6 (lower is better)
Translates to: PLDLRGFLFPWVLLL*RGPTGSSPCQSPAL
Trigger: GAGTGCTGGTGACTGGCAGGGAGAGCTCCCCGTGGGCCCTCTCAATAAGAGGAGCACCCACGGGAACAAAAAGCCTCGGAGGTCTAGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CAA 90 bp ACCAACCGAGGTTGGCCTGCTCTGAGGAAGGCCGGGCTGGCTCCTTaGGTCTCCGTGACCTTTGCAGAGGATGGTGGCTCCAAGGTGTCA +
Preference number: 6 (lower is better)
Translates to: TNRGWPALRKAGLAP*VSVTFAEDGGSKVS
Trigger: TGACACCTTGGAGCCACCATCCTCTGCAAAGGTCACGGAGACCAAAGGAGCCAGCCCGGCCTTCCTCAGAGCAGGCCAACCTCGGTTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS GCA 72 bp GTACTCCAGGGCCGCTCTGGCTCTCTTGGTCAGCATTaGAGCCCATCTCTTCTCTCCTGGGCGACTCAGGGT +
Preference number: 6 (lower is better)
Translates to: VLQGRSGSLGQH*SPSLLSWATQG
Trigger: ACCCTGAGTCGCCCAGGAGAGAAGAGATGGGCTGCAATGCTGACCAAGAGAGCCAGAGCGGCCCTGGAGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS GCA 72 bp ACACTAGAAATGGAGGCTGTTTCCCCGGCTGGCGACTaGGATGACCTATCCCCTTGCCGCTCCTTGCCCTGC +
Preference number: 6 (lower is better)
Translates to: TLEMEAVSPAGD*DDLSPCRSLPC
Trigger: GCAGGGCAAGGAGCGGCAAGGGGATAGGTCATCGCAGTCGCCAGCCGGGGAAACAGCCTCCATTTCTAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS GCA 72 bp GAAGGCCGGGCTGGCTCCTTTGGTCTCCGTGACCTTTaGAGAGGATGGTGGCTCCAAGGTGTCAGCAGAGAC +
Preference number: 6 (lower is better)
Translates to: EGRAGSFGLRDL*RGWWLQGVSRD
Trigger: GTCTCTGCTGACACCTTGGAGCCACCATCCTCTGCAAAGGTCACGGAGACCAAAGGAGCCAGCCCGGCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CCA 72 bp GCTGTCTCTGGCGACTTTGGCTTGACCTCACCACCCTaGGTTTGTGGTACTCCAGGGCCGCTCTGGCTCTCT +
Preference number: 6 (lower is better)
Translates to: AVSGDFGLTSPP*VCGTPGPLWLS
Trigger: AGAGAGCCAGAGCGGCCCTGGAGTACCACAAACCCAGGGTGGTGAGGTCAAGCCAAAGTCGCCAGAGACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS CAA 72 bp CTCCGAGGCTTTTTGTTCCCGTGGGTGCTCCTCTTATaGAGAGGGCCCACGGGGAGCTCTCCCTGCCAGTCA +
Preference number: 6 (lower is better)
Translates to: LRGFLFPWVLLL*RGPTGSSPCQS
Trigger: TGACTGGCAGGGAGAGCTCCCCGTGGGCCCTCTCAATAAGAGGAGCACCCACGGGAACAAAAAGCCTCGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CAA 90 bp CAGGGCTGTCTCTGGCGACTTTGGCTTGACCTCACCACCCTGGGTTaGTGGTACTCCAGGGCCGCTCTGGCTCTCTTGGTCAGCATTGCA +
Preference number: 6 (lower is better)
Translates to: QGCLWRLWLDLTTLG*WYSRAALALLVSIA
Trigger: TGCAATGCTGACCAAGAGAGCCAGAGCGGCCCTGGAGTACCACAAACCCAGGGTGGTGAGGTCAAGCCAAAGTCGCCAGAGACAGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS CAA 90 bp CTCTGGATGCTTCTCAGGGTCCTGGTGACTTTCAGACAAACCTGTTaGCTGATGCTCCAGCCCGCTCGGCGGCCTCCGAATGCCATCCCC +
Preference number: 6 (lower is better)
Translates to: LWMLLRVLVTFRQTC*LMLQPARRPPNAIP
Trigger: GGGGATGGCATTCGGAGGCCGCCGAGCGGGCTGGAGCATCAGCAAACAGGTTTGTCTGAAAGTCACCAGGACCCTGAGAAGCATCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS TCA 72 bp GGATGCGGGAGGCGGAGGCAATGCCTTCTGCTGATTTaGTGCCATGCCCTCCATTGGCTGGAGTGCTGCATG +
Preference number: 6 (lower is better)
Translates to: GCGRRRQCLLLI*CHALHWLECCM
Trigger: CATGCAGCACTCCAGCCAATGGAGGGCATGGCATCAAATCAGCAGAAGGCATTGCCTCCGCCTCCCGCATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
ENST00000672206.1
CDS GCA 72 bp CCTGGCTGGGGCGACGCTCTGTCTGAAGACCACCGTTaGCAGCTTCCAGTTTGCTGCTCATCTCAGGTGGAA +
Preference number: 6 (lower is better)
Translates to: PGWGDALSEDHR*QLPVCCSSQVE
Trigger: TTCCACCTGAGATGAGCAGCAAACTGGAAGCTGGCAACGGTGGTCTTCAGACAGAGCGTCGCCCCAGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS CCA 72 bp CTCCTTCCACTAGACCTCCGAGGCTTTTTGTTCCCGTaGGTGCTCCTCTTATTGAGAGGGCCCACGGGGAGC +
Preference number: 6 (lower is better)
Translates to: LLPLDLRGFLFP*VLLLLRGPTGS
Trigger: GCTCCCCGTGGGCCCTCTCAATAAGAGGAGCACCCACGGGAACAAAAAGCCTCGGAGGTCTAGTGGAAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CCA 72 bp AAAGCCAAGGTCTGTGTCTGGCGTCTTGGGAATATCTaGGGGGCAGCTCTCTCTCCTCTGCAGGGAGCAGGC +
Preference number: 6 (lower is better)
Translates to: KAKVCVWRLGNI*GAALSPLQGAG
Trigger: GCCTGCTCCCTGCAGAGGAGAGAGAGCTGCCCCCCAGATATTCCCAAGACGCCAGACACAGACCTTGGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CAA 72 bp CTGGGTTTGTGGTACTCCAGGGCCGCTCTGGCTCTCTaGGTCAGCATTGCAGCCCATCTCTTCTCTCCTGGG +
Preference number: 6 (lower is better)
Translates to: LGLWYSRAALAL*VSIAAHLFSPG
Trigger: CCCAGGAGAGAAGAGATGGGCTGCAATGCTGACCAAGAGAGCCAGAGCGGCCCTGGAGTACCACAAACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS CAA 90 bp AATAGGGCTTTAAAAGCCTCCAGGGCTGTCTCTGGCGACTTTGGCTaGACCTCACCACCCTGGGTTTGTGGTACTCCAGGGCCGCTCTGG +
Preference number: 6 (lower is better)
Translates to: NRALKASRAVSGDFG*TSPPWVCGTPGPLW
Trigger: CCAGAGCGGCCCTGGAGTACCACAAACCCAGGGTGGTGAGGTCAAGCCAAAGTCGCCAGAGACAGCCCTGGAGGCTTTTAAAGCCCTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS CAA 90 bp GAGCTGCAGTCAGGGGGCAGCACTTCTCTTCCAAGCCCAGTGTCCTaGAAAGCCGTCTCAAAGCTCCCAAAGCCAAGGTCTGTGTCTGGC +
Preference number: 6 (lower is better)
Translates to: ELQSGGSTSLPSPVS*KAVSKLPKPRSVSG
Trigger: GCCAGACACAGACCTTGGCTTTGGGAGCTTTGAGACGGCTTTCAAGGACACTGGGCTTGGAAGAGAAGTGCTGCCCCCTGACTGCAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS TCA 72 bp CCGGCTCTCCTCTTGTTTCTCGTTTCTGGGCGAGTGTaGGGGACACTCGTGTGGACAGGGAAGCCCAGTCTT +
Preference number: 6 (lower is better)
Translates to: PALLLFLVSGRV*GTLVWTGKPSL
Trigger: AAGACTGGGCTTCCCTGTCCACACGAGTGTCCCTCACACTCGCCCAGAAACGAGAAACAAGAGGAGAGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CCA 72 bp TCACCACCCTGGGTTTGTGGTACTCCAGGGCCGCTCTaGCTCTCTTGGTCAGCATTGCAGCCCATCTCTTCT +
Preference number: 6 (lower is better)
Translates to: SPPWVCGTPGPL*LSWSALQPISS
Trigger: AGAAGAGATGGGCTGCAATGCTGACCAAGAGAGCCAGAGCGGCCCTGGAGTACCACAAACCCAGGGTGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS CCA 72 bp AGGGTGAGCAAGTCGGCTTTGGGTACAAACTCAGCGTaGGCTGCTGGGCGAATGGCAATCGTCTCCTTACCC +
Preference number: 6 (lower is better)
Translates to: RVSKSALGTNSA*AAGRMAIVSLP
Trigger: GGGTAAGGAGACGATTGCCATTCGCCCAGCAGCCCACGCTGAGTTTGTACCCAAAGCCGACTTGCTCACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CCA 72 bp AAGGGGCAACCCGGCTCTCCTCTTGTTTCTCGTTTCTaGGCGAGTGTGAGGGACACTCGTGTGGACAGGGAA +
Preference number: 6 (lower is better)
Translates to: KGQPGSPLVSRF*ASVRDTRVDRE
Trigger: TTCCCTGTCCACACGAGTGTCCCTCACACTCGCCCAGAAACGAGAAACAAGAGGAGAGCCGGGTTGCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CCA 72 bp GGCTCCTTTGGTCTCCGTGACCTTTGCAGAGGATGGTaGCTCCAAGGTGTCAGCAGAGACGCACCCAGAGAA +
Preference number: 6 (lower is better)
Translates to: GSFGLRDLCRGW*LQGVSRDAPRE
Trigger: TTCTCTGGGTGCGTCTCTGCTGACACCTTGGAGCCACCATCCTCTGCAAAGGTCACGGAGACCAAAGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CCA 72 bp CTTCTCCCTTTCCTCATGAAGCAAAAATGGACAGGCTaGTCCCGCTCTGTAGCCCAGAACCCACGCGCCTCC +
Preference number: 6 (lower is better)
Translates to: LLPFLMKQKWTG*SRSVAQNPRAS
Trigger: GGAGGCGCGTGGGTTCTGGGCTACAGAGCGGGACCAGCCTGTCCATTTTTGCTTCATGAGGAAAGGGAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000616417.5
ENST00000672206.1
ENST00000674090.1
CDS CAA 72 bp TGGATGCGGGAGGCGGAGGCAATGCCTTCTGCTGATTaGATGCCATGCCCTCCATTGGCTGGAGTGCTGCAT +
Preference number: 6 (lower is better)
Translates to: WMREAEAMPSAD*MPCPPLAGVLH
Trigger: ATGCAGCACTCCAGCCAATGGAGGGCATGGCATCAAATCAGCAGAAGGCATTGCCTCCGCCTCCCGCATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
ENST00000672206.1
CDS CAA 72 bp GGACCTACTTTGTGGGGCAGATCCAGAAACAAGGACTaGTGGCCACCAAGGGGCAACCCGGCTCTCCTCTTG +
Preference number: 6 (lower is better)
Translates to: GPTLWGRSRNKD*WPPRGNPALLL
Trigger: CAAGAGGAGAGCCGGGTTGCCCCTTGGTGGCCACAAGTCCTTGTTTCTGGATCTGCCCCACAAAGTAGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CAA 90 bp GACTCAGGGTCTGCTCCCTTCGGTTCAGTTTTGGGCATGTCAATGTaGAGCAGCAGAGAGAGCTGCTCCAGGAGAGTGGGAGTGGCCTTC +
Preference number: 6 (lower is better)
Translates to: DSGSAPFGSVLGMSM*SSRESCSRRVGVAF
Trigger: GAAGGCCACTCCCACTCTCCTGGAGCAGCTCTCTCTGCTGCTCAACATTGACATGCCCAAAACTGAACCGAAGGGAGCAGACCCTGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS CAA 90 bp GCCGGCACTTCCAAATCCTGGGAACTGAAATGGACTGTCCATATCTaGGGCTACAGTGGTAGCAGGCACCCATGGTGCCAAAGGGTGGGG +
Preference number: 6 (lower is better)
Translates to: AGTSKSWELKWTVHI*GYSGSRHPWCQRVG
Trigger: CCCCACCCTTTGGCACCATGGGTGCCTGCTACCACTGTAGCCCAAGATATGGACAGTCCATTTCAGTTCCCAGGATTTGGAAGTGCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672206.1
CDS TCA 72 bp CAGGGGGCAGCACTTCTCTTCCAAGCCCAGTGTCCTTaGAAGCCGTCTCAAAGCTCCCAAAGCCAAGGTCTG +
Preference number: 6 (lower is better)
Translates to: QGAALLFQAQCP*KPSQSSQSQGL
Trigger: CAGACCTTGGCTTTGGGAGCTTTGAGACGGCTTTCAAGGACACTGGGCTTGGAAGAGAAGTGCTGCCCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS TCA 72 bp ACCCAGACTCCAAGTGGGCTTTCCAGAGATGCAATGTaGCTTGCTTGCCCTTCCCCTGCACCAAGGGGTCAC +
Preference number: 6 (lower is better)
Translates to: TQTPSGLSRDAM*LACPSPAPRGH
Trigger: GTGACCCCTTGGTGCAGGGGAAGGGCAAGCAAGTCACATTGCATCTCTGGAAAGCCCACTTGGAGTCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558882.1
CDS GCA 72 bp CTGCTCCAGGAGAGTGGGAGTGGCCTTCGGATCAGTTaGTTTCTTCTCACTCTTCACTGTCTGCAGCCCTGC +
Preference number: 6 (lower is better)
Translates to: LLQESGSGLRIS*FLLTLHCLQPC
Trigger: GCAGGGCTGCAGACAGTGAAGAGTGAGAAGAAAGCAACTGATCCGAAGGCCACTCCCACTCTCCTGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS GCA 72 bp AGAGTCATTAAGAGCAGCTTCCCTCTCACCAGGCAATaGAGGGAGCCGGAGGATCCTGTGATGCTGCTGAGG +
Preference number: 6 (lower is better)
Translates to: RVIKSSFPLTRQ*REPEDPVMLLR
Trigger: CCTCAGCAGCATCACAGGATCCTCCGGCTCCCTGCATTGCCTGGTGAGAGGGAAGCTGCTCTTAATGACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS GCA 72 bp GACTCCAAGTGGGCTTTCCAGAGATGCAATGTGACTTaGTTGCCCTTCCCCTGCACCAAGGGGTCACCGTCT +
Preference number: 6 (lower is better)
Translates to: DSKWAFQRCNVT*LPFPCTKGSPS
Trigger: AGACGGTGACCCCTTGGTGCAGGGGAAGGGCAAGCAAGTCACATTGCATCTCTGGAAAGCCCACTTGGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558882.1
CDS GCA 72 bp ATCTCAGCGCTGCTTTTCCCGGCAGCAGGGTCATCCTaGTGCATGCAACAGGTCACAGGAATGACGGTGTTG +
Preference number: 6 (lower is better)
Translates to: ISALLFPAAGSS*CMQQVTGMTVL
Trigger: CAACACCGTCATTCCTGTGACCTGTTGCATGCAGCAGGATGACCCTGCTGCCGGGAAAAGCAGCGCTGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558628.1
CDS GCA 72 bp GCGCCTCCATCTCTGTTGGGAAGGTCTTTAGGTGTCTaGTCATTGAAGCCGTCCCAGGGAAAGCCCTCAGAG +
Preference number: 6 (lower is better)
Translates to: APPSLLGRSLGV*SLKPSQGKPSE
Trigger: CTCTGAGGGCTTTCCCTGGGACGGCTTCAATGAGCAGACACCTAAAGACCTTCCCAACAGAGATGGAGGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000616417.5
ENST00000672206.1
ENST00000674090.1
CDS CCA 72 bp GGCTTTAAAAGCCTCCAGGGCTGTCTCTGGCGACTTTaGCTTGACCTCACCACCCTGGGTTTGTGGTACTCC +
Preference number: 6 (lower is better)
Translates to: GFKSLQGCLWRL*LDLTTLGLWYS
Trigger: GGAGTACCACAAACCCAGGGTGGTGAGGTCAAGCCAAAGTCGCCAGAGACAGCCCTGGAGGCTTTTAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS CCA 72 bp CCGGTGCTGGTGGGGATGGCTTCTTCTTATCACCTCTaGGTTGTGAGGAGTCAGGACCTACTTTGTGGGGCA +
Preference number: 6 (lower is better)
Translates to: PVLVGMASSYHL*VVRSQDLLCGA
Trigger: TGCCCCACAAAGTAGGTCCTGACTCCTCACAACCCAGAGGTGATAAGAAGAAGCCATCCCCACCAGCACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CAA 72 bp CTGGGCGACTCAGGGTCTGCTCCCTTCGGTTCAGTTTaGGGCATGTCAATGTTGAGCAGCAGAGAGAGCTGC +
Preference number: 6 (lower is better)
Translates to: LGDSGSAPFGSV*GMSMLSSRESC
Trigger: GCAGCTCTCTCTGCTGCTCAACATTGACATGCCCAAAACTGAACCGAAGGGAGCAGACCCTGAGTCGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS CAA 72 bp TTAAAAGCCTCCAGGGCTGTCTCTGGCGACTTTGGCTaGACCTCACCACCCTGGGTTTGTGGTACTCCAGGG +
Preference number: 6 (lower is better)
Translates to: LKASRAVSGDFG*TSPPWVCGTPG
Trigger: CCCTGGAGTACCACAAACCCAGGGTGGTGAGGTCAAGCCAAAGTCGCCAGAGACAGCCCTGGAGGCTTTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS CAA 72 bp TCTAACTTCTCACTCTCTATCACCTTCAGGGGGACCTaGTTCACGGCCCCCTCGGCACTGGCCGACACACTA +
Preference number: 6 (lower is better)
Translates to: SNFSLSITFRGT*FTAPSALADTL
Trigger: TAGTGTGTCGGCCAGTGCCGAGGGGGCCGTGAACAAGGTCCCCCTGAAGGTGATAGAGAGTGAGAAGTTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CAA 72 bp AGACTCCAAGTGGGCTTTCCAGAGATGCAATGTGACTaGCTTGCCCTTCCCCTGCACCAAGGGGTCACCGTC +
Preference number: 6 (lower is better)
Translates to: RLQVGFPEMQCD*LALPLHQGVTV
Trigger: GACGGTGACCCCTTGGTGCAGGGGAAGGGCAAGCAAGTCACATTGCATCTCTGGAAAGCCCACTTGGAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558882.1
CDS CAA 90 bp GAGGCGGAGGCAATGCCTTCTGCTGATTTGATGCCATGCCCTCCATaGGCTGGAGTGCTGCATGGATGTCTTTGTGGTCATTTGGGGGTG +
Preference number: 6 (lower is better)
Translates to: EAEAMPSADLMPCPP*AGVLHGCLCGHLGV
Trigger: CACCCCCAAATGACCACAAAGACATCCATGCAGCACTCCAGCCAATGGAGGGCATGGCATCAAATCAGCAGAAGGCATTGCCTCCGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
ENST00000672206.1
CDS GCA 72 bp GAGGCGGAGGCAATGCCTTCTGCTGATTTGATGCCATaGCCTCCATTGGCTGGAGTGCTGCATGGATGTCTT +
Preference number: 6 (lower is better)
Translates to: EAEAMPSADLMP*PPLAGVLHGCL
Trigger: AAGACATCCATGCAGCACTCCAGCCAATGGAGGGCATGGCATCAAATCAGCAGAAGGCATTGCCTCCGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
ENST00000672206.1
CDS GCA 72 bp GAGCAAGTCGGCTTTGGGTACAAACTCAGCGTGGGCTaGTGGGCGAATGGCAATCGTCTCCTTACCCTTAGA +
Preference number: 6 (lower is better)
Translates to: EQVGFGYKLSVG*WANGNRLLTLR
Trigger: TCTAAGGGTAAGGAGACGATTGCCATTCGCCCAGCAGCCCACGCTGAGTTTGTACCCAAAGCCGACTTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS GCA 72 bp GAGACACACTGTATCCAACAGCACAAATCTCAGCGCTaGTTTTCCCGGCAGCAGGGTCATCCTGCTGCATGC +
Preference number: 6 (lower is better)
Translates to: ETHCIQQHKSQR*FSRQQGHPAAC
Trigger: GCATGCAGCAGGATGACCCTGCTGCCGGGAAAAGCAGCGCTGAGATTTGTGCTGTTGGATACAGTGTGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558628.1
CDS GCA 72 bp GAGGAGATACCTTCCTCTGGGGTTACCGACCTCCTGTaGCGGCACTTCCAAATCCTGGGAACTGAAATGGAC +
Preference number: 6 (lower is better)
Translates to: EEIPSSGVTDLL*RHFQILGTEMD
Trigger: GTCCATTTCAGTTCCCAGGATTTGGAAGTGCCGGCACAGGAGGTCGGTAACCCCAGAGGAAGGTATCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672206.1
CDS CCA 72 bp ACACTCGAATTCTGGTTTGTTACTGCAGGTAGGTCTTaGGACCCTTCTTCTCCCACCTGGTCCTGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: TLEFWFVTAGRS*DPSSPTWSWLG
Trigger: CCCCAGCCAGGACCAGGTGGGAGAAGAAGGGTCCCAAGACCTACCTGCAGTAACAAACCAGAATTCGAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS CCA 72 bp CCTACTTTGTGGGGCAGATCCAGAAACAAGGACTTGTaGCCACCAAGGGGCAACCCGGCTCTCCTCTTGTTT +
Preference number: 6 (lower is better)
Translates to: PTLWGRSRNKDL*PPRGNPALLLF
Trigger: AAACAAGAGGAGAGCCGGGTTGCCCCTTGGTGGCCACAAGTCCTTGTTTCTGGATCTGCCCCACAAAGTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CCA 72 bp GCGATGATGTGTTCCAGGGCAACTGTGAAAAATCTGTaGAGTCTATGCCCAGAAGCAGCCGAGGCTGCGCAC +
Preference number: 6 (lower is better)
Translates to: AMMCSRATVKNL*SLCPEAAEAAH
Trigger: GTGCGCAGCCTCGGCTGCTTCTGGGCATAGACTCCACAGATTTTTCACAGTTGCCCTGGAACACATCATCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS CAA 72 bp AAGCTCTCTCTCCTTCCACTAGACCTCCGAGGCTTTTaGTTCCCGTGGGTGCTCCTCTTATTGAGAGGGCCC +
Preference number: 6 (lower is better)
Translates to: KLSLLPLDLRGF*FPWVLLLLRGP
Trigger: GGGCCCTCTCAATAAGAGGAGCACCCACGGGAACAAAAAGCCTCGGAGGTCTAGTGGAAGGAGAGAGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CAA 72 bp TCAGGGGGCAGCACTTCTCTTCCAAGCCCAGTGTCCTaGAAAGCCGTCTCAAAGCTCCCAAAGCCAAGGTCT +
Preference number: 6 (lower is better)
Translates to: SGGSTSLPSPVS*KAVSKLPKPRS
Trigger: AGACCTTGGCTTTGGGAGCTTTGAGACGGCTTTCAAGGACACTGGGCTTGGAAGAGAAGTGCTGCCCCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CAA 72 bp TGTGTGCTGGACTGCGAGGCTGAATTATTAAACACCTaGCCAAGAGCTGCCGGTGCTGGTGGGGATGGCTTC +
Preference number: 6 (lower is better)
Translates to: CVLDCEAELLNT*PRAAGAGGDGF
Trigger: GAAGCCATCCCCACCAGCACCGGCAGCTCTTGGCAAGGTGTTTAATAATTCAGCCTCGCAGTCCAGCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CAA 90 bp GACCGTTCAAACACAGCTCTTAGCGACTCCTTCTCATGTCTCATCTaGCGCTTGAGAGCTTCCAGCTCAGAGGTGTCAGCTGTGGTCCCC +
Preference number: 6 (lower is better)
Translates to: DRSNTALSDSFSCLI*RLRASSSEVSAVVP
Trigger: GGGGACCACAGCTGACACCTCTGAGCTGGAAGCTCTCAAGCGCAAGATGAGACATGAGAAGGAGTCGCTAAGAGCTGTGTTTGAACGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS CAA 90 bp TTAGGCCTTGTTCTAGAAAGAGGAAGGGAGTGGCTGGAACAGATCTaGTCCTTGCCCATCAGAGGAGCTGATTCTCGGCCTCCACGCCCT +
Preference number: 6 (lower is better)
Translates to: LGLVLERGREWLEQI*SLPIRGADSRPPRP
Trigger: AGGGCGTGGAGGCCGAGAATCAGCTCCTCTGATGGGCAAGGACAAGATCTGTTCCAGCCACTCCCTTCCTCTTTCTAGAACAAGGCCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CAA 90 bp GGCTTCTTCTTATCACCTCTGGGTTGTGAGGAGTCAGGACCTACTTaGTGGGGCAGATCCAGAAACAAGGACTTGTGGCCACCAAGGGGC +
Preference number: 6 (lower is better)
Translates to: GFFLSPLGCEESGPT*WGRSRNKDLWPPRG
Trigger: GCCCCTTGGTGGCCACAAGTCCTTGTTTCTGGATCTGCCCCACAAAGTAGGTCCTGACTCCTCACAACCCAGAGGTGATAAGAAGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CAA 90 bp CTGGGGAGCCTTGGAGACAGAGGCGAGGGAACAGGTGACGTCTGTTaGTGTGTGCTGGACTGCGAGGCTGAATTATTAAACACCTTGCCA +
Preference number: 6 (lower is better)
Translates to: LGSLGDRGEGTGDVC*CVLDCEAELLNTLP
Trigger: TGGCAAGGTGTTTAATAATTCAGCCTCGCAGTCCAGCACACACAAACAGACGTCACCTGTTCCCTCGCCTCTGTCTCCAAGGCTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS TCA 72 bp CTCTTAGCGACTCCTTCTCATGTCTCATCTTGCGCTTaGGAGCTTCCAGCTCAGAGGTGTCAGCTGTGGTCC +
Preference number: 6 (lower is better)
Translates to: LLATPSHVSSCA*ELPAQRCQLWS
Trigger: GGACCACAGCTGACACCTCTGAGCTGGAAGCTCTCAAGCGCAAGATGAGACATGAGAAGGAGTCGCTAAGAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS TCA 72 bp GCTGGAACAGATCTTGTCCTTGCCCATCAGAGGAGCTaGTTCTCGGCCTCCACGCCCTTTTCTTTTGGTCCT +
Preference number: 6 (lower is better)
Translates to: AGTDLVLAHQRS*FSASTPFSFGP
Trigger: AGGACCAAAAGAAAAGGGCGTGGAGGCCGAGAATCAGCTCCTCTGATGGGCAAGGACAAGATCTGTTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS GCA 72 bp GTTTTGGGCATGTCAATGTTGAGCAGCAGAGAGAGCTaGTCCAGGAGAGTGGGAGTGGCCTTCGGATCAGTT +
Preference number: 6 (lower is better)
Translates to: VLGMSMLSSRES*SRRVGVAFGSV
Trigger: AACTGATCCGAAGGCCACTCCCACTCTCCTGGAGCAGCTCTCTCTGCTGCTCAACATTGACATGCCCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS GCA 72 bp GCACAGCAAACACACTTGGTCTCTTTCGGGTCACAGTaGCCTCCTTCCGGTTTGTGCGATGATGTGTTCCAG +
Preference number: 6 (lower is better)
Translates to: AQQTHLVSFGSQ*PPSGLCDDVFQ
Trigger: CTGGAACACATCATCGCACAAACCGGAAGGAGGGCACTGTGACCCGAAAGAGACCAAGTGTGTTTGCTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558197.1
CDS CCA 72 bp CCCGAGACCCTGCTTCCTGTGGATCCAAGCCATTGCTaGAATCATCCTGCTGAGATGTGGGATTCACGTCTA +
Preference number: 6 (lower is better)
Translates to: PETLLPVDPSHC*NHPAEMWDSRL
Trigger: TAGACGTGAATCCCACATCTCAGCAGGATGATTCCAGCAATGGCTTGGATCCACAGGAAGCAGGGTCTCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS CCA 72 bp CCCTCCATTGGCTGGAGTGCTGCATGGATGTCTTTGTaGTCATTTGGGGGTGAGAGCTGGCTTAAAGAGGAG +
Preference number: 6 (lower is better)
Translates to: PSIGWSAAWMSL*SFGGESWLKEE
Trigger: CTCCTCTTTAAGCCAGCTCTCACCCCCAAATGACCACAAAGACATCCATGCAGCACTCCAGCCAATGGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
ENST00000672206.1
CDS CCA 72 bp TTTGATGCCATGCCCTCCATTGGCTGGAGTGCTGCATaGATGTCTTTGTGGTCATTTGGGGGTGAGAGCTGG +
Preference number: 6 (lower is better)
Translates to: FDAMPSIGWSAA*MSLWSFGGESW
Trigger: CCAGCTCTCACCCCCAAATGACCACAAAGACATCCATGCAGCACTCCAGCCAATGGAGGGCATGGCATCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
ENST00000672206.1
CDS CCA 72 bp CAAGTCGGCTTTGGGTACAAACTCAGCGTGGGCTGCTaGGCGAATGGCAATCGTCTCCTTACCCTTAGAATG +
Preference number: 6 (lower is better)
Translates to: QVGFGYKLSVGC*ANGNRLLTLRM
Trigger: CATTCTAAGGGTAAGGAGACGATTGCCATTCGCCCAGCAGCCCACGCTGAGTTTGTACCCAAAGCCGACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CAA 72 bp TCTGCTCCCTTCGGTTCAGTTTTGGGCATGTCAATGTaGAGCAGCAGAGAGAGCTGCTCCAGGAGAGTGGGA +
Preference number: 6 (lower is better)
Translates to: SAPFGSVLGMSM*SSRESCSRRVG
Trigger: TCCCACTCTCCTGGAGCAGCTCTCTCTGCTGCTCAACATTGACATGCCCAAAACTGAACCGAAGGGAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS CAA 72 bp TGCCTACCTAATTATTCATGCCTTGGAGATGCCGGTTaGTGGTCAGGCTTCCCAGGCTCCAGTGGTGAGGCA +
Preference number: 6 (lower is better)
Translates to: CLPNYSCLGDAG*WSGFPGSSGEA
Trigger: TGCCTCACCACTGGAGCCTGGGAAGCCTGACCACAAACCGGCATCTCCAAGGCATGAATAATTAGGTAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS TCA 72 bp CACGCTTGCAATTTTCTCATCATTTCCGAGGTCAGGTaGAACCCGAGACCCTGCTTCCTGTGGATCCAAGCC +
Preference number: 6 (lower is better)
Translates to: HACNFLIISEVR*NPRPCFLWIQA
Trigger: GGCTTGGATCCACAGGAAGCAGGGTCTCGGGTTTCACCTGACCTCGGAAATGATGAGAAAATTGCAAGCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS TCA 72 bp CGACCTCCTGTGCCGGCACTTCCAAATCCTGGGAACTaGAATGGACTGTCCATATCTTGGGCTACAGTGGTA +
Preference number: 6 (lower is better)
Translates to: RPPVPALPNPGN*NGLSISWATVV
Trigger: TACCACTGTAGCCCAAGATATGGACAGTCCATTTCAGTTCCCAGGATTTGGAAGTGCCGGCACAGGAGGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672206.1
CDS GCA 72 bp AAACCCGAGACCCTGCTTCCTGTGGATCCAAGCCATTaGTGGAATCATCCTGCTGAGATGTGGGATTCACGT +
Preference number: 6 (lower is better)
Translates to: KPETLLPVDPSH*WNHPAEMWDSR
Trigger: ACGTGAATCCCACATCTCAGCAGGATGATTCCAGCAATGGCTTGGATCCACAGGAAGCAGGGTCTCGGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS GCA 72 bp TGCAGCCCTGCCTGCACTAAGGACTTCTGCACAGGCTaGGTCAATTTGAGCAAAGCTAAGTCCCCATCCTTT +
Preference number: 6 (lower is better)
Translates to: CSPACTKDFCTG*VNLSKAKSPSF
Trigger: AAAGGATGGGGACTTAGCTTTGCTCAAATTGACGCAGCCTGTGCAGAAGTCCTTAGTGCAGGCAGGGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS GCA 72 bp TTCACTGTCTGCAGCCCTGCCTGCACTAAGGACTTCTaGACAGGCTGCGTCAATTTGAGCAAAGCTAAGTCC +
Preference number: 6 (lower is better)
Translates to: FTVCSPACTKDF*TGCVNLSKAKS
Trigger: GGACTTAGCTTTGCTCAAATTGACGCAGCCTGTGCAGAAGTCCTTAGTGCAGGCAGGGCTGCAGACAGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS GCA 72 bp GCTTTCTTCTCACTCTTCACTGTCTGCAGCCCTGCCTaGACTAAGGACTTCTGCACAGGCTGCGTCAATTTG +
Preference number: 6 (lower is better)
Translates to: AFFSLFTVCSPA*TKDFCTGCVNL
Trigger: CAAATTGACGCAGCCTGTGCAGAAGTCCTTAGTGCAGGCAGGGCTGCAGACAGTGAAGAGTGAGAAGAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS GCA 72 bp AATGTTGACCCAGACTCCAAGTGGGCTTTCCAGAGATaGAATGTGACTTGCTTGCCCTTCCCCTGCACCAAG +
Preference number: 6 (lower is better)
Translates to: NVDPDSKWAFQR*NVTCLPFPCTK
Trigger: CTTGGTGCAGGGGAAGGGCAAGCAAGTCACATTGCATCTCTGGAAAGCCCACTTGGAGTCTGGGTCAACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558882.1
CDS CCA 72 bp AACTGGGCTCGATGGCTGGTTTTCGAGGACATTGACTaGAAGAAGAGCCAAGTCCAAAGAAGAGTCCAGGGG +
Preference number: 6 (lower is better)
Translates to: NWARWLVFEDID*KKSQVQRRVQG
Trigger: CCCCTGGACTCTTCTTTGGACTTGGCTCTTCTTCCAGTCAATGTCCTCGAAAACCAGCCATCGAGCCCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
ENST00000672206.1
CDS CCA 72 bp CTACCTAATTATTCATGCCTTGGAGATGCCGGTTTGTaGTCAGGCTTCCCAGGCTCCAGTGGTGAGGCATGT +
Preference number: 6 (lower is better)
Translates to: LPNYSCLGDAGL*SGFPGSSGEAC
Trigger: ACATGCCTCACCACTGGAGCCTGGGAAGCCTGACCACAAACCGGCATCTCCAAGGCATGAATAATTAGGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CCA 72 bp TTGAAAAATATGTCGCCTGGATGTTCGTCCGGCTCCTaGCTGAGGCTGATGATGTCTGACTCCTCCCTGACT +
Preference number: 6 (lower is better)
Translates to: LKNMSPGCSSGS*LRLMMSDSSLT
Trigger: AGTCAGGGAGGAGTCAGACATCATCAGCCTCAGCCAGGAGCCGGACGAACATCCAGGCGACATATTTTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CCA 72 bp GTCTTTCGTGGGAGTCTGCTTGAAAAATATGTCGCCTaGATGTTCGTCCGGCTCCTGGCTGAGGCTGATGAT +
Preference number: 6 (lower is better)
Translates to: VFRGSLLEKYVA*MFVRLLAEADD
Trigger: ATCATCAGCCTCAGCCAGGAGCCGGACGAACATCCAGGCGACATATTTTTCAAGCAGACTCCCACGAAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CCA 72 bp TCCTGTGCCGGCACTTCCAAATCCTGGGAACTGAAATaGACTGTCCATATCTTGGGCTACAGTGGTAGCAGG +
Preference number: 6 (lower is better)
Translates to: SCAGTSKSWELK*TVHILGYSGSR
Trigger: CCTGCTACCACTGTAGCCCAAGATATGGACAGTCCATTTCAGTTCCCAGGATTTGGAAGTGCCGGCACAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672206.1
CDS CAA 72 bp TTCTGTGTCTTTTGTCTTTGGGGGTGGCCAGACAGCTaGAAGTCTGCCAGGAGTCCTGTCATCCTGCTCAGT +
Preference number: 6 (lower is better)
Translates to: FCVFCLWGWPDS*KSARSPVILLS
Trigger: ACTGAGCAGGATGACAGGACTCCTGGCAGACTTCAAGCTGTCTGGCCACCCCCAAAGACAAAAGACACAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334528.13
ENST00000558197.1
ENST00000559150.1
ENST00000616417.5
ENST00000672206.1
CDS CAA 72 bp ATGCCCTCCATTGGCTGGAGTGCTGCATGGATGTCTTaGTGGTCATTTGGGGGTGAGAGCTGGCTTAAAGAG +
Preference number: 6 (lower is better)
Translates to: MPSIGWSAAWMS*WSFGGESWLKE
Trigger: CTCTTTAAGCCAGCTCTCACCCCCAAATGACCACAAAGACATCCATGCAGCACTCCAGCCAATGGAGGGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
ENST00000672206.1
CDS CAA 72 bp GTTCTAGAAAGAGGAAGGGAGTGGCTGGAACAGATCTaGTCCTTGCCCATCAGAGGAGCTGATTCTCGGCCT +
Preference number: 6 (lower is better)
Translates to: VLERGREWLEQI*SLPIRGADSRP
Trigger: AGGCCGAGAATCAGCTCCTCTGATGGGCAAGGACAAGATCTGTTCCAGCCACTCCCTTCCTCTTTCTAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CAA 90 bp TCAAACACAGCTCTTAGCGACTCCTTCTCATGTCTCATCTTGCGCTaGAGAGCTTCCAGCTCAGAGGTGTCAGCTGTGGTCCCCTTTCTG +
Preference number: 6 (lower is better)
Translates to: SNTALSDSFSCLILR*RASSSEVSAVVPFL
Trigger: CAGAAAGGGGACCACAGCTGACACCTCTGAGCTGGAAGCTCTCAAGCGCAAGATGAGACATGAGAAGGAGTCGCTAAGAGCTGTGTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS CAA 90 bp TGGTTCCCCATCGTGATCCCCAGGATGTGGTCTGAGCTCAGGAGATaGGTTAGCAGTCTCTCCCTCTCTGTTGTGAGTTTGTACAGCTCA +
Preference number: 6 (lower is better)
Translates to: WFPIVIPRMWSELRR*VSSLSLSVVSLYSS
Trigger: TGAGCTGTACAAACTCACAACAGAGAGGGAGAGACTGCTAACCAATCTCCTGAGCTCAGACCACATCCTGGGGATCACGATGGGGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CAA 90 bp ACCGTTGCCAGCTTCCAGTTTGCTGCTCATCTCAGGTGGAATCCTTaGAGGATCTTCTGCACAGAGCTCTGCACCATTCATTTCCCCAGT +
Preference number: 6 (lower is better)
Translates to: TVASFQFAAHLRWNP*RIFCTELCTIHFPS
Trigger: ACTGGGGAAATGAATGGTGCAGAGCTCTGTGCAGAAGATCCTCAAAGGATTCCACCTGAGATGAGCAGCAAACTGGAAGCTGGCAACGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS CAA 90 bp TGGTCAGGACTTTTGGAATCAGAGGGGCCATCCGCTGGCTTAGAATaGGACCGTTCAAACACAGCTCTTAGCGACTCCTTCTCATGTCTC +
Preference number: 6 (lower is better)
Translates to: WSGLLESEGPSAGLE*DRSNTALSDSFSCL
Trigger: GAGACATGAGAAGGAGTCGCTAAGAGCTGTGTTTGAACGGTCCAATTCTAAGCCAGCGGATGGCCCCTCTGATTCCAAAAGTCCTGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS CAA 90 bp CTTCCATTATGCCTACCTAATTATTCATGCCTTGGAGATGCCGGTTaGTGGTCAGGCTTCCCAGGCTCCAGTGGTGAGGCATGTGATGGT +
Preference number: 6 (lower is better)
Translates to: LPLCLPNYSCLGDAG*WSGFPGSSGEACDG
Trigger: ACCATCACATGCCTCACCACTGGAGCCTGGGAAGCCTGACCACAAACCGGCATCTCCAAGGCATGAATAATTAGGTAGGCATAATGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CAA 90 bp GTCTGTTTGTGTGTGCTGGACTGCGAGGCTGAATTATTAAACACCTaGCCAAGAGCTGCCGGTGCTGGTGGGGATGGCTTCTTCTTATCA +
Preference number: 6 (lower is better)
Translates to: VCLCVLDCEAELLNT*PRAAGAGGDGFFLS
Trigger: TGATAAGAAGAAGCCATCCCCACCAGCACCGGCAGCTCTTGGCAAGGTGTTTAATAATTCAGCCTCGCAGTCCAGCACACACAAACAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS TCA 72 bp GGAAGGTCTCTCTGTCTGTCTGGACGCACACATTTCTaGAGGTCTTTGGAGGGCAGTCATCATCGGTGGAAA +
Preference number: 6 (lower is better)
Translates to: GRSLCLSGRTHF*RSLEGSHHRWK
Trigger: TTTCCACCGATGATGACTGCCCTCCAAAGACCTTCAGAAATGTGTGCGTCCAGACAGACAGAGAGACCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
ENST00000672206.1
CDS TCA 72 bp GGACAACTGGGCTCGATGGCTGGTTTTCGAGGACATTaGCTGGAAGAAGAGCCAAGTCCAAAGAAGAGTCCA +
Preference number: 6 (lower is better)
Translates to: GQLGSMAGFRGH*LEEEPSPKKSP
Trigger: TGGACTCTTCTTTGGACTTGGCTCTTCTTCCAGTCAATGTCCTCGAAAACCAGCCATCGAGCCCAGTTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
ENST00000672206.1
CDS GCA 72 bp CTGTCTGAAGACCACCGTTGCCAGCTTCCAGTTTGCTaGTCATCTCAGGTGGAATCCTTTGAGGATCTTCTG +
Preference number: 6 (lower is better)
Translates to: LSEDHRCQLPVC*SSQVESFEDLL
Trigger: CAGAAGATCCTCAAAGGATTCCACCTGAGATGAGCAGCAAACTGGAAGCTGGCAACGGTGGTCTTCAGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS GCA 72 bp GCTCTGTCTGAAGACCACCGTTGCCAGCTTCCAGTTTaGTGCTCATCTCAGGTGGAATCCTTTGAGGATCTT +
Preference number: 6 (lower is better)
Translates to: ALSEDHRCQLPV*CSSQVESFEDL
Trigger: AAGATCCTCAAAGGATTCCACCTGAGATGAGCAGCAAACTGGAAGCTGGCAACGGTGGTCTTCAGACAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS CAA 72 bp CTTTTGGAATCAGAGGGGCCATCCGCTGGCTTAGAATaGGACCGTTCAAACACAGCTCTTAGCGACTCCTTC +
Preference number: 6 (lower is better)
Translates to: LLESEGPSAGLE*DRSNTALSDSF
Trigger: GAAGGAGTCGCTAAGAGCTGTGTTTGAACGGTCCAATTCTAAGCCAGCGGATGGCCCCTCTGATTCCAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS CAA 72 bp GCAATGCCTTCTGCTGATTTGATGCCATGCCCTCCATaGGCTGGAGTGCTGCATGGATGTCTTTGTGGTCAT +
Preference number: 6 (lower is better)
Translates to: AMPSADLMPCPP*AGVLHGCLCGH
Trigger: ATGACCACAAAGACATCCATGCAGCACTCCAGCCAATGGAGGGCATGGCATCAAATCAGCAGAAGGCATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
ENST00000672206.1
CDS CAA 72 bp TCCAAATCCTGGGAACTGAAATGGACTGTCCATATCTaGGGCTACAGTGGTAGCAGGCACCCATGGTGCCAA +
Preference number: 6 (lower is better)
Translates to: SKSWELKWTVHI*GYSGSRHPWCQ
Trigger: TTGGCACCATGGGTGCCTGCTACCACTGTAGCCCAAGATATGGACAGTCCATTTCAGTTCCCAGGATTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672206.1
CDS CAA 90 bp TGCAGCCCTGCCTGCACTAAGGACTTCTGCACAGGCTGCGTCAATTaGAGCAAAGCTAAGTCCCCATCCTTTGGTTTAATTTCCGTGATG +
Preference number: 6 (lower is better)
Translates to: CSPACTKDFCTGCVN*SKAKSPSFGLISVM
Trigger: CATCACGGAAATTAAACCAAAGGATGGGGACTTAGCTTTGCTCAAATTGACGCAGCCTGTGCAGAAGTCCTTAGTGCAGGCAGGGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS CAA 90 bp TGCCCTCCATTGGCTGGAGTGCTGCATGGATGTCTTTGTGGTCATTaGGGGGTGAGAGCTGGCTTAAAGAGGAGATATTCAGCTTTTTGG +
Preference number: 6 (lower is better)
Translates to: CPPLAGVLHGCLCGH*GVRAGLKRRYSAFW
Trigger: CCAAAAAGCTGAATATCTCCTCTTTAAGCCAGCTCTCACCCCCAAATGACCACAAAGACATCCATGCAGCACTCCAGCCAATGGAGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
ENST00000672206.1
CDS CAA 90 bp TTTGATGCCATGCCCTCCATTGGCTGGAGTGCTGCATGGATGTCTTaGTGGTCATTTGGGGGTGAGAGCTGGCTTAAAGAGGAGATATTC +
Preference number: 6 (lower is better)
Translates to: FDAMPSIGWSAAWMS*WSFGGESWLKEEIF
Trigger: GAATATCTCCTCTTTAAGCCAGCTCTCACCCCCAAATGACCACAAAGACATCCATGCAGCACTCCAGCCAATGGAGGGCATGGCATCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
ENST00000672206.1
CDS CAA 90 bp GTGAGTTTGTACAGCTCAGTTAGAATGTCTTTCGTGGGAGTCTGCTaGAAAAATATGTCGCCTGGATGTTCGTCCGGCTCCTGGCTGAGG +
Preference number: 6 (lower is better)
Translates to: VSLYSSVRMSFVGVC*KNMSPGCSSGSWLR
Trigger: CCTCAGCCAGGAGCCGGACGAACATCCAGGCGACATATTTTTCAAGCAGACTCCCACGAAAGACATTCTAACTGAGCTGTACAAACTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CAA 90 bp ATCGGAAAGGGATGGCCTTTTTGGAAGAACTCCTCTAGTTTGTCCTaGAAAGGCTGGAGATACTCCTTTGGGGACTCCTTGCACACCACC +
Preference number: 6 (lower is better)
Translates to: IGKGWPFWKNSSSLS*KGWRYSFGDSLHTT
Trigger: GGTGGTGTGCAAGGAGTCCCCAAAGGAGTATCTCCAGCCTTTCAAGGACAAACTAGAGGAGTTCTTCCAAAAAGGCCATCCCTTTCCGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559610.1
CDS TCA 72 bp AGTCTCGCTGTTATCATTGCATGCTCGCCCCGGATATaGAATGCCCGAAGTTCAAACTGTGCCTGCAGGTTT +
Preference number: 6 (lower is better)
Translates to: SLAVIIACSPRI*NARSSNCACRF
Trigger: AAACCTGCAGGCACAGTTTGAACTTCGGGCATTTCATATCCGGGGCGAGCATGCAATGATAACAGCGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
ENST00000672206.1
CDS TCA 72 bp CAGGGTCATCCTGCTGCATGCAACAGGTCACAGGAATaGCGGTGTTGTGATTTAGCTGGCTGCACATTTAGA +
Preference number: 6 (lower is better)
Translates to: QGHPAACNRSQE*RCCDLAGCTFR
Trigger: TCTAAATGTGCAGCCAGCTAAATCACAACACCGTCATTCCTGTGACCTGTTGCATGCAGCAGGATGACCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558628.1
CDS CCA 72 bp TCTGTCTGTCTGGACGCACACATTTCTGAAGGTCTTTaGAGGGCAGTCATCATCGGTGGAAATGCACACATC +
Preference number: 6 (lower is better)
Translates to: SVCLDAHISEGL*RAVIIGGNAHI
Trigger: GATGTGTGCATTTCCACCGATGATGACTGCCCTCCAAAGACCTTCAGAAATGTGTGCGTCCAGACAGACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
ENST00000672206.1
CDS CAA 90 bp CAACGTTCTCCATGTCTCAGTAATGCCCTTGGTGGAAGTTCTGACTaGTGTTACCTTCTCCTGCGCTCTCAGTTTATCCACTCCATCTGC +
Preference number: 6 (lower is better)
Translates to: QRSPCLSNALGGSSD*CYLLLRSQFIHSIC
Trigger: GCAGATGGAGTGGATAAACTGAGAGCGCAGGAGAAGGTAACACAAGTCAGAACTTCCACCAAGGGCATTACTGAGACATGGAGAACGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558197.1
ENST00000559150.1
CDS CAA 90 bp TCAGGCTGTGGTCAGGATGGAGATCCAAGTACAATTCGCTCCTGTTaGACTTCTCCCTTTCCTCATGAAGCAAAAATGGACAGGCTGGTC +
Preference number: 6 (lower is better)
Translates to: SGCGQDGDPSTIRSC*TSPFPHEAKMDRLV
Trigger: GACCAGCCTGTCCATTTTTGCTTCATGAGGAAAGGGAGAAGTCAAACAGGAGCGAATTGTACTTGGATCTCCATCCTGACCACAGCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000616417.5
ENST00000672206.1
ENST00000674090.1
CDS TCA 72 bp GCTTCCAGTTTGCTGCTCATCTCAGGTGGAATCCTTTaGGGATCTTCTGCACAGAGCTCTGCACCATTCATT +
Preference number: 6 (lower is better)
Translates to: ASSLLLISGGIL*GSSAQSSAPFI
Trigger: AATGAATGGTGCAGAGCTCTGTGCAGAAGATCCTCAAAGGATTCCACCTGAGATGAGCAGCAAACTGGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS TCA 72 bp ACAGCTCAGTTAGAATGTCTTTCGTGGGAGTCTGCTTaGAAAATATGTCGCCTGGATGTTCGTCCGGCTCCT +
Preference number: 6 (lower is better)
Translates to: TAQLECLSWESA*KICRLDVRPAP
Trigger: AGGAGCCGGACGAACATCCAGGCGACATATTTTTCAAGCAGACTCCCACGAAAGACATTCTAACTGAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS GCA 72 bp CGCTGTTATCATTGCATGCTCGCCCCGGATATGAAATaGCCGAAGTTCAAACTGTGCCTGCAGGTTTTCAAT +
Preference number: 6 (lower is better)
Translates to: RCYHCMLAPDMK*PKFKLCLQVFN
Trigger: ATTGAAAACCTGCAGGCACAGTTTGAACTTCGGGCATTTCATATCCGGGGCGAGCATGCAATGATAACAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
ENST00000672206.1
CDS GCA 72 bp GTCCGGCTTCTGGTTTTGCTGGTTCTGACACATCACTaGCATCCAGAGAATTATCAACGTTCTCCATGTCTC +
Preference number: 6 (lower is better)
Translates to: VRLLVLLVLTHH*HPENYQRSPCL
Trigger: GAGACATGGAGAACGTTGATAATTCTCTGGATGGCAGTGATGTGTCAGAACCAGCAAAACCAGAAGCCGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558197.1
ENST00000559150.1
CDS CCA 72 bp GAAGAGGCACTCTCAGTGATACCAACACTCGAATTCTaGTTTGTTACTGCAGGTAGGTCTTGGGACCCTTCT +
Preference number: 6 (lower is better)
Translates to: EEALSVIPTLEF*FVTAGRSWDPS
Trigger: AGAAGGGTCCCAAGACCTACCTGCAGTAACAAACCAGAATTCGAGTGTTGGTATCACTGAGAGTGCCTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS CCA 72 bp TCCAATATAAAGGCTTCATGGGACAACTGGGCTCGATaGCTGGTTTTCGAGGACATTGACTGGAAGAAGAGC +
Preference number: 6 (lower is better)
Translates to: SNIKASWDNWAR*LVFEDIDWKKS
Trigger: GCTCTTCTTCCAGTCAATGTCCTCGAAAACCAGCCATCGAGCCCAGTTGTCCCATGAAGCCTTTATATTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
ENST00000672206.1
CDS CAA 72 bp AGCTTCCAGTTTGCTGCTCATCTCAGGTGGAATCCTTaGAGGATCTTCTGCACAGAGCTCTGCACCATTCAT +
Preference number: 6 (lower is better)
Translates to: SFQFAAHLRWNP*RIFCTELCTIH
Trigger: ATGAATGGTGCAGAGCTCTGTGCAGAAGATCCTCAAAGGATTCCACCTGAGATGAGCAGCAAACTGGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS CAA 72 bp TTGGCTGGAGTGCTGCATGGATGTCTTTGTGGTCATTaGGGGGTGAGAGCTGGCTTAAAGAGGAGATATTCA +
Preference number: 6 (lower is better)
Translates to: LAGVLHGCLCGH*GVRAGLKRRYS
Trigger: TGAATATCTCCTCTTTAAGCCAGCTCTCACCCCCAAATGACCACAAAGACATCCATGCAGCACTCCAGCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
ENST00000672206.1
CDS CAA 72 bp TACAGCTCAGTTAGAATGTCTTTCGTGGGAGTCTGCTaGAAAAATATGTCGCCTGGATGTTCGTCCGGCTCC +
Preference number: 6 (lower is better)
Translates to: YSSVRMSFVGVC*KNMSPGCSSGS
Trigger: GGAGCCGGACGAACATCCAGGCGACATATTTTTCAAGCAGACTCCCACGAAAGACATTCTAACTGAGCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CAA 72 bp CCATGTCTCAGTAATGCCCTTGGTGGAAGTTCTGACTaGTGTTACCTTCTCCTGCGCTCTCAGTTTATCCAC +
Preference number: 6 (lower is better)
Translates to: PCLSNALGGSSD*CYLLLRSQFIH
Trigger: GTGGATAAACTGAGAGCGCAGGAGAAGGTAACACAAGTCAGAACTTCCACCAAGGGCATTACTGAGACATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558197.1
ENST00000559150.1
CDS CAA 72 bp GGATGGCCTTTTTGGAAGAACTCCTCTAGTTTGTCCTaGAAAGGCTGGAGATACTCCTTTGGGGACTCCTTG +
Preference number: 6 (lower is better)
Translates to: GWPFWKNSSSLS*KGWRYSFGDSL
Trigger: CAAGGAGTCCCCAAAGGAGTATCTCCAGCCTTTCAAGGACAAACTAGAGGAGTTCTTCCAAAAAGGCCATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559610.1
CDS CAA 72 bp GGAAAGGGATGGCCTTTTTGGAAGAACTCCTCTAGTTaGTCCTTGAAAGGCTGGAGATACTCCTTTGGGGAC +
Preference number: 6 (lower is better)
Translates to: GKGWPFWKNSSS*SLKGWRYSFGD
Trigger: GTCCCCAAAGGAGTATCTCCAGCCTTTCAAGGACAAACTAGAGGAGTTCTTCCAAAAAGGCCATCCCTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559610.1
CDS CAA 90 bp GCCATCCAGAGAATTATCAACGTTCTCCATGTCTCAGTAATGCCCTaGGTGGAAGTTCTGACTTGTGTTACCTTCTCCTGCGCTCTCAGT +
Preference number: 6 (lower is better)
Translates to: AIQRIINVLHVSVMP*VEVLTCVTFSCALS
Trigger: ACTGAGAGCGCAGGAGAAGGTAACACAAGTCAGAACTTCCACCAAGGGCATTACTGAGACATGGAGAACGTTGATAATTCTCTGGATGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558197.1
ENST00000559150.1
CDS CAA 90 bp AATGGCAATCGTCTCCTTACCCTTAGAATGCGTTTTAACTACTCTTaGTACCTGGGAGGACAGGTCCTGAACTTTGGCCACCACTTTGGA +
Preference number: 6 (lower is better)
Translates to: NGNRLLTLRMRFNYS*YLGGQVLNFGHHFG
Trigger: TCCAAAGTGGTGGCCAAAGTTCAGGACCTGTCCTCCCAGGTACAAAGAGTAGTTAAAACGCATTCTAAGGGTAAGGAGACGATTGCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS TCA 72 bp TCCTGTGGATCCAAGCCATTGCTGGAATCATCCTGCTaGGATGTGGGATTCACGTCTAAACTATGGAATGCT +
Preference number: 6 (lower is better)
Translates to: SCGSKPLLESSC*DVGFTSKLWNA
Trigger: AGCATTCCATAGTTTAGACGTGAATCCCACATCTCAGCAGGATGATTCCAGCAATGGCTTGGATCCACAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS TCA 72 bp AAACAAATGCTTTACACCAACAGAGGCACAGCACGCTaGCATCGGAAAGGGATGGCCTTTTTGGAAGAACTC +
Preference number: 6 (lower is better)
Translates to: KQMLYTNRGTAR*HRKGMAFLEEL
Trigger: GAGTTCTTCCAAAAAGGCCATCCCTTTCCGATGTCAGCGTGCTGTGCCTCTGTTGGTGTAAAGCATTTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559610.1
CDS GCA 72 bp AATGAGTGCCTTCCATTATGCCTACCTAATTATTCATaGCTTGGAGATGCCGGTTTGTGGTCAGGCTTCCCA +
Preference number: 6 (lower is better)
Translates to: NECLPLCLPNYS*LGDAGLWSGFP
Trigger: TGGGAAGCCTGACCACAAACCGGCATCTCCAAGGCATGAATAATTAGGTAGGCATAATGGAAGGCACTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS GCA 72 bp TTGTACAGCTCAGTTAGAATGTCTTTCGTGGGAGTCTaGTTGAAAAATATGTCGCCTGGATGTTCGTCCGGC +
Preference number: 6 (lower is better)
Translates to: LYSSVRMSFVGV*LKNMSPGCSSG
Trigger: GCCGGACGAACATCCAGGCGACATATTTTTCAAGCAGACTCCCACGAAAGACATTCTAACTGAGCTGTACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CCA 72 bp TCACTTGATATTAGCAATGTTGACCCAGACTCCAAGTaGGCTTTCCAGAGATGCAATGTGACTTGCTTGCCC +
Preference number: 6 (lower is better)
Translates to: SLDISNVDPDSK*AFQRCNVTCLP
Trigger: GGGCAAGCAAGTCACATTGCATCTCTGGAAAGCCCACTTGGAGTCTGGGTCAACATTGCTAATATCAAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558882.1
CDS CAA 72 bp GCCTGCACTAAGGACTTCTGCACAGGCTGCGTCAATTaGAGCAAAGCTAAGTCCCCATCCTTTGGTTTAATT +
Preference number: 6 (lower is better)
Translates to: ACTKDFCTGCVN*SKAKSPSFGLI
Trigger: AATTAAACCAAAGGATGGGGACTTAGCTTTGCTCAAATTGACGCAGCCTGTGCAGAAGTCCTTAGTGCAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS CAA 72 bp GCTGATGTAGCAGAGTTCCGTAATGGGCTTATGCAATaGGAGGGTACAATGAGTGCCTTCCATTATGCCTAC +
Preference number: 6 (lower is better)
Translates to: ADVAEFRNGLMQ*EGTMSAFHYAY
Trigger: GTAGGCATAATGGAAGGCACTCATTGTACCCTCCAATTGCATAAGCCCATTACGGAACTCTGCTACATCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CAA 90 bp TCCACCAGATTAATCCCATTATCCCGACTTTTGACATCCTTGAGTTaGGGCAGAATTTCTAAGCTATATCCATCGGCTTGTCCCCGAGTC +
Preference number: 6 (lower is better)
Translates to: STRLIPLSRLLTSLS*GRISKLYPSACPRV
Trigger: GACTCGGGGACAAGCCGATGGATATAGCTTAGAAATTCTGCCCAAACTCAAGGATGTCAAAAGTCGGGATAATGGGATTAATCTGGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
ENST00000672206.1
CDS TCA 72 bp AATAGGGATTTCATAGAGAACTTACTCAGGATCGACTaGGCCACTTCAAGTCCGGCTTCTGGTTTTGCTGGT +
Preference number: 6 (lower is better)
Translates to: NRDFIENLLRID*ATSSPASGFAG
Trigger: ACCAGCAAAACCAGAAGCCGGACTTGAAGTGGCTCAGTCGATCCTGAGTAAGTTCTCTATGAAATCCCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS CCA 72 bp GATCCAAGCCATTGCTGGAATCATCCTGCTGAGATGTaGGATTCACGTCTAAACTATGGAATGCTTTCAGCA +
Preference number: 6 (lower is better)
Translates to: DPSHCWNHPAEM*DSRLNYGMLSA
Trigger: TGCTGAAAGCATTCCATAGTTTAGACGTGAATCCCACATCTCAGCAGGATGATTCCAGCAATGGCTTGGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334528.13
ENST00000558197.1
CDS CCA 72 bp GCATGGATGTCTTTGTGGTCATTTGGGGGTGAGAGCTaGCTTAAAGAGGAGATATTCAGCTTTTTGGGTACT +
Preference number: 6 (lower is better)
Translates to: AWMSLWSFGGES*LKEEIFSFLGT
Trigger: AGTACCCAAAAAGCTGAATATCTCCTCTTTAAGCCAGCTCTCACCCCCAAATGACCACAAAGACATCCATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
ENST00000672206.1
CDS CAA 72 bp GGTCAGGATGGAGATCCAAGTACAATTCGCTCCTGTTaGACTTCTCCCTTTCCTCATGAAGCAAAAATGGAC +
Preference number: 6 (lower is better)
Translates to: GQDGDPSTIRSC*TSPFPHEAKMD
Trigger: GTCCATTTTTGCTTCATGAGGAAAGGGAGAAGTCAAACAGGAGCGAATTGTACTTGGATCTCCATCCTGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000616417.5
ENST00000672206.1
ENST00000674090.1
CDS CAA 90 bp CGTGTTTCAGATTTTCAATGGTTTCTTCTAGTCTCGCTGTTATCATaGCATGCTCGCCCCGGATATGAAATGCCCGAAGTTCAAACTGTG +
Preference number: 6 (lower is better)
Translates to: RVSDFQWFLLVSLLS*HARPGYEMPEVQTV
Trigger: CACAGTTTGAACTTCGGGCATTTCATATCCGGGGCGAGCATGCAATGATAACAGCGAGACTAGAAGAAACCATTGAAAATCTGAAACACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
ENST00000672206.1
CDS TCA 72 bp GTCAGGATGGAGATCCAAGTACAATTCGCTCCTGTTTaGCTTCTCCCTTTCCTCATGAAGCAAAAATGGACA +
Preference number: 6 (lower is better)
Translates to: VRMEIQVQFAPV*LLPFLMKQKWT
Trigger: TGTCCATTTTTGCTTCATGAGGAAAGGGAGAAGTCAAACAGGAGCGAATTGTACTTGGATCTCCATCCTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000616417.5
ENST00000672206.1
ENST00000674090.1
CDS GCA 72 bp TATGCAATTGGAGGGTACAATGAGTGCCTTCCATTATaGCTACCTAATTATTCATGCCTTGGAGATGCCGGT +
Preference number: 6 (lower is better)
Translates to: YAIGGYNECLPL*LPNYSCLGDAG
Trigger: ACCGGCATCTCCAAGGCATGAATAATTAGGTAGGCATAATGGAAGGCACTCATTGTACCCTCCAATTGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CCA 72 bp CACGTAGCTGGGTGTGATCTCCTTCTCACCAGACTTTaGCTTCATCCCAAAATATCGTACTGTTGTTTCAAA +
Preference number: 6 (lower is better)
Translates to: HVAGCDLLLTRL*LHPKISYCCFK
Trigger: TTTGAAACAACAGTACGATATTTTGGGATGAAGCCAAAGTCTGGTGAGAAGGAGATCACACCCAGCTACGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334528.13
ENST00000558882.1
ENST00000561249.5
ENST00000616417.5
ENST00000672206.1
CDS CAA 72 bp AGAATTATCAACGTTCTCCATGTCTCAGTAATGCCCTaGGTGGAAGTTCTGACTTGTGTTACCTTCTCCTGC +
Preference number: 6 (lower is better)
Translates to: RIINVLHVSVMP*VEVLTCVTFSC
Trigger: GCAGGAGAAGGTAACACAAGTCAGAACTTCCACCAAGGGCATTACTGAGACATGGAGAACGTTGATAATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558197.1
ENST00000559150.1
CDS CCA 72 bp ATACCCTCAGAAAAGACAGATCTGAAGATTATGCACTaGGCACGTTCAGCAAAATTAGGAATCTGGGCTAAC +
Preference number: 6 (lower is better)
Translates to: IPSEKTDLKIMH*ARSAKLGIWAN
Trigger: GTTAGCCCAGATTCCTAATTTTGCTGAACGTGCCCAGTGCATAATCTTCAGATCTGTCTTTTCTGAGGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334528.13
ENST00000558711.1
ENST00000560317.5
ENST00000561249.5
ENST00000616417.5
ENST00000672206.1
CDS CAA 90 bp AAGACAGAAGCTGATGTAGCAGAGTTCCGTAATGGGCTTATGCAATaGGAGGGTACAATGAGTGCCTTCCATTATGCCTACCTAATTATT +
Preference number: 6 (lower is better)
Translates to: KTEADVAEFRNGLMQ*EGTMSAFHYAYLII
Trigger: AATAATTAGGTAGGCATAATGGAAGGCACTCATTGTACCCTCCAATTGCATAAGCCCATTACGGAACTCTGCTACATCAGCTTCTGTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320930.7
ENST00000561249.5
ENST00000616417.5
CDS CAA 72 bp AGTTCAAACTGTGCCTGCAGGTTTTCAATTTCTTCTTaGTGCTCCCTCTTCAAGTGTAAAATAGCAGCTTGG +
Preference number: 6 (lower is better)
Translates to: SSNCACRFSISS*CSLFKCKIAAW
Trigger: CCAAGCTGCTATTTTACACTTGAAGAGGGAGCACAAAGAAGAAATTGAAAACCTGCAGGCACAGTTTGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
ENST00000672206.1
CDS GCA 72 bp TCAAACTGTGCCTGCAGGTTTTCAATTTCTTCTTTGTaGTCCCTCTTCAAGTGTAAAATAGCAGCTTGGTAT +
Preference number: 6 (lower is better)
Translates to: SNCACRFSISSL*SLFKCKIAAWY
Trigger: ATACCAAGCTGCTATTTTACACTTGAAGAGGGAGCACAAAGAAGAAATTGAAAACCTGCAGGCACAGTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334528.13
ENST00000561249.5
ENST00000616417.5
ENST00000672206.1
CDS CCA 72 bp ATTATGCACTGGGCACGTTCAGCAAAATTAGGAATCTaGGCTAACTCATGTAAAAATTGCTCAGGTTTATCC +
Preference number: 6 (lower is better)
Translates to: IMHWARSAKLGI*ANSCKNCSGLS
Trigger: GGATAAACCTGAGCAATTTTTACATGAGTTAGCCCAGATTCCTAATTTTGCTGAACGTGCCCAGTGCATAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334528.13
ENST00000560317.5
ENST00000561249.5
ENST00000616417.5
ENST00000672206.1
CDS CCA 72 bp TGGGAGACAAGAAGACAGAAATTGCAGTTCTCCTTTTaGCCTAACAGAAAAATGTTAAGTATCCTTACTGCT +
Preference number: 6 (lower is better)
Translates to: WETRRQKLQFSF*PNRKMLSILTA
Trigger: AGCAGTAAGGATACTTAACATTTTTCTGTTAGGCCAAAAGGAGAACTGCAATTTCTGTCTTCTTGTCTCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558628.1
CDS CAA 72 bp TGCCTTCTTCCTTCCTCAGTTACCCTTTTGGTCAAATaGTTTAGTCTAGGAGGAATTAACAAGTTGCTAGAA +
Preference number: 6 (lower is better)
Translates to: CLLPSSVTLLVK*FSLGGINKLLE
Trigger: TTCTAGCAACTTGTTAATTCCTCCTAGACTAAACAATTTGACCAAAAGGGTAACTGAGGAAGGAAGAAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558628.1
CDS CAA 72 bp ACAGAACAATGCCTTCTTCCTTCCTCAGTTACCCTTTaGGTCAAATTGTTTAGTCTAGGAGGAATTAACAAG +
Preference number: 6 (lower is better)
Translates to: TEQCLLPSSVTL*VKLFSLGGINK
Trigger: CTTGTTAATTCCTCCTAGACTAAACAATTTGACCAAAAGGGTAACTGAGGAAGGAAGAAGGCATTGTTCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558628.1