Pregenerated sensors for FMC1 (Homo sapiens)
Ensembl gene IDs: ENSG00000164898Ensembl transcript IDs: ENST00000297534.7, ENST00000468383.5, ENST00000481123.1, ENST00000482181.1, ENST00000488886.1
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CCAGGCTGGAGTGAGTGCCATGGCGCGATCTCAGCTCATCGCAACCTCCACCTCCCTGTCCCAGCCTCCTaGGTAGCTGGGATTACAGGC | + |
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Preference number: 2 (lower is better) Translates to: PGWSECHGAISAHRNLHLPVPAS*VAGITG Trigger: GCCTGTAATCCCAGCTACTCAGGAGGCTGGGACAGG...GAGGTGGAGGTTGCGATGAGCTGAGATCGCGCCATGGCACTCACTCCAGCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297534.7 |
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| 3UTR-3UTR GCA 90 bp | GCTGGAGTGAGTGCCATGGCGCGATCTCAGCTCATCGCAACCTCCACCTCCCGGAGGCGTGAGCCACCGTaGCTGGCTAAGGCTTGTACT | + |
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Preference number: 2 (lower is better) Translates to: AGVSAMARSQLIATSTSRRREPP*LAKACT Trigger: AGTACAAGCCTTAGCCAGGCACGGTGGCTCACGCCT...CCGGGAGGTGGAGGTTGCGATGAGCTGAGATCGCGCCATGGCACTCACTCCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297534.7 |
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| 3UTR-3UTR GCA 90 bp | GCCCAGGCTGGAGTGAGTGCCATGGCGCGATCTCAGCTCATCGCAACCTCCACCCAATTCTCCTATGAATaGAGCATCCAAGGATATTCT | + |
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Preference number: 2 (lower is better) Translates to: AQAGVSAMARSQLIATSTQFSYE*SIQGYS Trigger: AGAATATCCTTGGATGCTGCATTCATAGGAGAATTG...GGTGGAGGTTGCGATGAGCTGAGATCGCGCCATGGCACTCACTCCAGCCTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297534.7 |
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| 3UTR-3UTR TCA 90 bp | CAGGCTGGAGTGAGTGCCATGGCGCGATCTCAGCTCATCGCAACCTCCACCTCCTATTCAATTCTCCTATaGATGCAGCATCCAAGGATA | + |
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Preference number: 2 (lower is better) Translates to: QAGVSAMARSQLIATSTSYSILL*MQHPRI Trigger: TATCCTTGGATGCTGCATTCATAGGAGAATTGAATA...GGAGGTGGAGGTTGCGATGAGCTGAGATCGCGCCATGGCACTCACTCCAGCCTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297534.7 |
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| CDS-3UTR CCA 90 bp | GCTGGAGTGAGTGCCATGGCGCGATCTCAGCTCATCGCAACCTCCACCTCCCGGGATAGGGTCGGCCGGTaGCCGCGCTCAGGTAGCGCA | + |
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Preference number: 4 (lower is better) Translates to: AGVSAMARSQLIATSTSRDRVGR*PRSGSA Trigger: TGCGCTACCTGAGCGCGGCCACCGGCCGACCCTATC...CCGGGAGGTGGAGGTTGCGATGAGCTGAGATCGCGCCATGGCACTCACTCCAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297534.7 |
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| CDS-3UTR TCA 90 bp | GCCCAGGCTGGAGTGAGTGCCATGGCGCGATCTCAGCTCATCGCAACCTCCACCCCCTTCCCTCCAGGCTaGTGGGGCAACTTGAGACCC | + |
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Preference number: 4 (lower is better) Translates to: AQAGVSAMARSQLIATSTPFPPG*WGNLRP Trigger: GGGTCTCAAGTTGCCCCATCAGCCTGGAGGGAAGGG...GGTGGAGGTTGCGATGAGCTGAGATCGCGCCATGGCACTCACTCCAGCCTGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000297534.7 |
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| CDS-3UTR GCA 90 bp | GCTGGAGTGAGTGCCATGGCGCGATCTCAGCTCATCGCAACCTCCACCTCCCGGCTTCTCCGAGCGTGGTaGCCAACGGCGTCCTACGAC | + |
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Preference number: 4 (lower is better) Translates to: AGVSAMARSQLIATSTSRLLRAW*PTASYD Trigger: GTCGTAGGACGCCGTTGGGCACCACGCTCGGAGAAG...CCGGGAGGTGGAGGTTGCGATGAGCTGAGATCGCGCCATGGCACTCACTCCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297534.7 |
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| CDS-3UTR CCA 90 bp | GCTGGAGTGAGTGCCATGGCGCGATCTCAGCTCATCGCAACCTCCACCTCCCGGGTCCTTCTCCGAGCGTaGTGCCCAACGGCGTCCTAC | + |
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Preference number: 4 (lower is better) Translates to: AGVSAMARSQLIATSTSRVLLRA*CPTASY Trigger: GTAGGACGCCGTTGGGCACCACGCTCGGAGAAGGAC...CCGGGAGGTGGAGGTTGCGATGAGCTGAGATCGCGCCATGGCACTCACTCCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297534.7 |
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| CDS-3UTR TCA 90 bp | CCAGGCTGGAGTGAGTGCCATGGCGCGATCTCAGCTCATCGCAACCTCCACCTCTTGCCCAGGCTGGAGTaGGTGCCATGGCGCGATCTC | + |
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Preference number: 4 (lower is better) Translates to: PGWSECHGAISAHRNLHLLPRLE*VPWRDL Trigger: GAGATCGCGCCATGGCACTCACTCCAGCCTGGGCAA...GAGGTGGAGGTTGCGATGAGCTGAGATCGCGCCATGGCACTCACTCCAGCCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297534.7 |
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| CDS-3UTR GCA 90 bp | GCTGGAGTGAGTGCCATGGCGCGATCTCAGCTCATCGCAACCTCCACCTCCCGGCCAGGCTGGAGTGAGTaGCATGGCGCGATCTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: AGVSAMARSQLIATSTSRPGWSE*HGAISA Trigger: AGCTGAGATCGCGCCATGGCACTCACTCCAGCCTGG...CCGGGAGGTGGAGGTTGCGATGAGCTGAGATCGCGCCATGGCACTCACTCCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297534.7 |
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| CDS-3UTR CCA 90 bp | GCTGGAGTGAGTGCCATGGCGCGATCTCAGCTCATCGCAACCTCCACCTCCCGGTCTTGTTGCCCAGGCTaGAGTGAGTGCCATGGCGCG | + |
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Preference number: 4 (lower is better) Translates to: AGVSAMARSQLIATSTSRSCCPG*SECHGA Trigger: CGCGCCATGGCACTCACTCCAGCCTGGGCAACAAGA...CCGGGAGGTGGAGGTTGCGATGAGCTGAGATCGCGCCATGGCACTCACTCCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297534.7 |
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| CDS-3UTR TCA 90 bp | CAGGCTGGAGTGAGTGCCATGGCGCGATCTCAGCTCATCGCAACCTCCACCTCCCCTGTCCCAGCCTCCTaGGTAGCTGGGATTACAGGC | + |
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Preference number: 4 (lower is better) Translates to: QAGVSAMARSQLIATSTSPVPAS*VAGITG Trigger: GCCTGTAATCCCAGCTACTCAGGAGGCTGGGACAGG...GGAGGTGGAGGTTGCGATGAGCTGAGATCGCGCCATGGCACTCACTCCAGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297534.7 |
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| CDS-3UTR GCA 90 bp | CCAGGCTGGAGTGAGTGCCATGGCGCGATCTCAGCTCATCGCAACCTCCACCTCAGTCCTCGAAAAGTGTaGGACGGGGACCCTAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: PGWSECHGAISAHRNLHLSPRKV*DGDPKA Trigger: GGCCTTAGGGTCCCCGTCGCACACTTTTCGAGGACT...GAGGTGGAGGTTGCGATGAGCTGAGATCGCGCCATGGCACTCACTCCAGCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297534.7 |
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| CDS-3UTR GCA 90 bp | CAGGCTGGAGTGAGTGCCATGGCGCGATCTCAGCTCATCGCAACCTCCACCTCCAGGCGTGAGCCACCGTaGCTGGCTAAGGCTTGTACT | + |
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Preference number: 4 (lower is better) Translates to: QAGVSAMARSQLIATSTSRREPP*LAKACT Trigger: AGTACAAGCCTTAGCCAGGCACGGTGGCTCACGCCT...GGAGGTGGAGGTTGCGATGAGCTGAGATCGCGCCATGGCACTCACTCCAGCCTG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297534.7 |
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| CDS-3UTR CCA 90 bp | GCCCAGGCTGGAGTGAGTGCCATGGCGCGATCTCAGCTCATCGCAACCTCCACCTATTCTCCATGTTCATaGCTCCCAGCCCTTCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: AQAGVSAMARSQLIATSTYSPCS*LPALPS Trigger: GGAGGGAAGGGCTGGGAGCCATGAACATGGAGAATA...GGTGGAGGTTGCGATGAGCTGAGATCGCGCCATGGCACTCACTCCAGCCTGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297534.7 |
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| CDS-3UTR TCA 90 bp | CAGGCTGGAGTGAGTGCCATGGCGCGATCTCAGCTCATCGCAACCTCCACCTCCGTGGCAGCTTGGAAATaGAGCTCATGTTGGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: QAGVSAMARSQLIATSTSVAAWK*SSCWAL Trigger: CAGAGCCCAACATGAGCTTCATTTCCAAGCTGCCAC...GGAGGTGGAGGTTGCGATGAGCTGAGATCGCGCCATGGCACTCACTCCAGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297534.7 |
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| CDS-3UTR GCA 90 bp | CCAGGCTGGAGTGAGTGCCATGGCGCGATCTCAGCTCATCGCAACCTCCACCTCACTGGTGACCCGATGTaGACGGAAAGCCTTCACAAG | + |
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Preference number: 4 (lower is better) Translates to: PGWSECHGAISAHRNLHLTGDPM*TESLHK Trigger: CTTGTGAAGGCTTTCCGTGCACATCGGGTCACCAGT...GAGGTGGAGGTTGCGATGAGCTGAGATCGCGCCATGGCACTCACTCCAGCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297534.7 |
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| CDS-3UTR GCA 90 bp | CAGGCTGGAGTGAGTGCCATGGCGCGATCTCAGCTCATCGCAACCTCCACCTCCCCACATGTTTCCGGATaGTACGCAGGAGGCAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: QAGVSAMARSQLIATSTSPHVSG*YAGGRD Trigger: ATCTCTGCCTCCTGCGTAGCATCCGGAAACATGTGG...GGAGGTGGAGGTTGCGATGAGCTGAGATCGCGCCATGGCACTCACTCCAGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297534.7 |
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| CDS-3UTR GCA 90 bp | CCAGGCTGGAGTGAGTGCCATGGCGCGATCTCAGCTCATCGCAACCTCCACCTCCCGAGCGCTCACCCTTaGCATGAAATTCCTGATGTA | + |
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Preference number: 4 (lower is better) Translates to: PGWSECHGAISAHRNLHLPSAHP*HEIPDV Trigger: TACATCAGGAATTTCATGGCAAGGGTGAGCGCTCGG...GAGGTGGAGGTTGCGATGAGCTGAGATCGCGCCATGGCACTCACTCCAGCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297534.7 |
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| CDS-3UTR GCA 90 bp | CAGGCTGGAGTGAGTGCCATGGCGCGATCTCAGCTCATCGCAACCTCCACCTCCCAATTCTCCTATGAATaGAGCATCCAAGGATATTCT | + |
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Preference number: 4 (lower is better) Translates to: QAGVSAMARSQLIATSTSQFSYE*SIQGYS Trigger: AGAATATCCTTGGATGCTGCATTCATAGGAGAATTG...GGAGGTGGAGGTTGCGATGAGCTGAGATCGCGCCATGGCACTCACTCCAGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297534.7 |
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| CDS-3UTR TCA 90 bp | AGTTCAGTAAATTCACTGAGAGTAAAGATGAAATGTCCAGTTAATTCCCCTAAGACAACTTTTCACTGGTaGCCCGATGTGCACGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: SSVNSLRVKMKCPVNSPKTTFHW*PDVHGK Trigger: CTTTCCGTGCACATCGGGTCACCAGTGAAAAGTTGT...CTTAGGGGAATTAACTGGACATTTCATCTTTACTCTCAGTGAATTTACTGAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297534.7 |
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| CDS CCA 90 bp | TCACAAGGTACCGATAGGCCGCGGTGTCGCGATAGGGTCGGCCGGTaGCCGCGCTCAGGTAGCGCAACTCCCGCAGAAGTCCTCGAAAAG | + |
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Preference number: 5 (lower is better) Translates to: SQGTDRPRCRDRVGR*PRSGSATPAEVLEK Trigger: CTTTTCGAGGACTTCTGCGGGAGTTGCGCTACCTGAGCGCGGCCACCGGCCGACCCTATCGCGACACCGCGGCCTATCGGTACCTTGTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297534.7 |
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| CDS-3UTR CAA 90 bp | GCTGGAGTGAGTGCCATGGCGCGATCTCAGCTCATCGCAACCTCCACCTCCCGGACCCTAAGGCCGCCATaGTCCTGTCCTTCTCCGAGC | + |
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Preference number: 5 (lower is better) Translates to: AGVSAMARSQLIATSTSRTLRPP*SCPSPS Trigger: GCTCGGAGAAGGACAGGACAATGGCGGCCTTAGGGT...CCGGGAGGTGGAGGTTGCGATGAGCTGAGATCGCGCCATGGCACTCACTCCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297534.7 |
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| CDS GCA 90 bp | GAACAAAAGTCCACATCACCGCGCCAAAGGCTTTACCCTCGAAACTaGACCGATGCTCCGGACGTTGAACGGGCGCGCGCACGCTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: EQKSTSPRQRLYPRN*TDAPDVERARARFC Trigger: GCAGAAGCGTGCGCGCGCCCGTTCAACGTCCGGAGCATCGGTGCAGTTTCGAGGGTAAAGCCTTTGGCGCGGTGATGTGGACTTTTGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481123.1 |
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| CDS TCA 90 bp | AAGGATATTCTCCATGTTCATGGCTCCCAGCCCTTCCCTCCAGGCTaGTGGGGCAACTTGAGACCCACCAAGCCAGCAGACTCCTCCACC | + |
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Preference number: 5 (lower is better) Translates to: KDILHVHGSQPFPPG*WGNLRPTKPADSST Trigger: GGTGGAGGAGTCTGCTGGCTTGGTGGGTCTCAAGTTGCCCCATCAGCCTGGAGGGAAGGGCTGGGAGCCATGAACATGGAGAATATCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000297534.7 ENST00000468383.5 ENST00000481123.1 ENST00000482181.1 ENST00000488886.1 |
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| CDS-3UTR CAA 90 bp | GCTGGAGTGAGTGCCATGGCGCGATCTCAGCTCATCGCAACCTCCACCTCCCGGGAAATGAAGCTCATGTaGGGCTCTGCACAACTTTTC | + |
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Preference number: 5 (lower is better) Translates to: AGVSAMARSQLIATSTSREMKLM*GSAQLF Trigger: GAAAAGTTGTGCAGAGCCCAACATGAGCTTCATTTC...CCGGGAGGTGGAGGTTGCGATGAGCTGAGATCGCGCCATGGCACTCACTCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297534.7 |
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| CDS CCA 90 bp | GTAGGGCCACATGTTTCCGGATGCTACGCAGGAGGCAGAGATAGGTaGCAGCTTGGAAATGAAGCTCATGTTGGGCTCTGCACAACTTTT | + |
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Preference number: 5 (lower is better) Translates to: VGPHVSGCYAGGRDR*QLGNEAHVGLCTTF Trigger: AAAAGTTGTGCAGAGCCCAACATGAGCTTCATTTCCAAGCTGCCACCTATCTCTGCCTCCTGCGTAGCATCCGGAAACATGTGGCCCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000297534.7 ENST00000468383.5 ENST00000481123.1 ENST00000482181.1 ENST00000488886.1 |
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| CDS CCA 72 bp | ACCGATAGGCCGCGGTGTCGCGATAGGGTCGGCCGGTaGCCGCGCTCAGGTAGCGCAACTCCCGCAGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: TDRPRCRDRVGR*PRSGSATPAEV Trigger: GACTTCTGCGGGAGTTGCGCTACCTGAGCGCGGCCACCGGCCGACCCTATCGCGACACCGCGGCCTATCGGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297534.7 |
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| CDS TCA 72 bp | GCTTTACCCTCGAAACTGCACCGATGCTCCGGACGTTaGACGGGCGCGCGCACGCTTCTGCGTACGCGCTTG | + |
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Preference number: 6 (lower is better) Translates to: ALPSKLHRCSGR*TGARTLLRTRL Trigger: CAAGCGCGTACGCAGAAGCGTGCGCGCGCCCGTTCAACGTCCGGAGCATCGGTGCAGTTTCGAGGGTAAAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481123.1 |
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| CDS CAA 72 bp | CTCGAAAAGTGTGCGACGGGGACCCTAAGGCCGCCATaGTCCTGTCCTTCTCCGAGCGTGGTGCCCAACGGC | + |
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Preference number: 6 (lower is better) Translates to: LEKCATGTLRPP*SCPSPSVVPNG Trigger: GCCGTTGGGCACCACGCTCGGAGAAGGACAGGACAATGGCGGCCTTAGGGTCCCCGTCGCACACTTTTCGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297534.7 |
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| CDS CAA 72 bp | GGCTTTACCCTCGAAACTGCACCGATGCTCCGGACGTaGAACGGGCGCGCGCACGCTTCTGCGTACGCGCTT | + |
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Preference number: 6 (lower is better) Translates to: GFTLETAPMLRT*NGRAHASAYAL Trigger: AAGCGCGTACGCAGAAGCGTGCGCGCGCCCGTTCAACGTCCGGAGCATCGGTGCAGTTTCGAGGGTAAAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481123.1 |
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| CDS CAA 90 bp | GCAGAAGTCCTCGAAAAGTGTGCGACGGGGACCCTAAGGCCGCCATaGTCCTGTCCTTCTCCGAGCGTGGTGCCCAACGGCGTCCTACGA | + |
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Preference number: 6 (lower is better) Translates to: AEVLEKCATGTLRPP*SCPSPSVVPNGVLR Trigger: TCGTAGGACGCCGTTGGGCACCACGCTCGGAGAAGGACAGGACAATGGCGGCCTTAGGGTCCCCGTCGCACACTTTTCGAGGACTTCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297534.7 |
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| CDS GCA 72 bp | TCCACATCACCGCGCCAAAGGCTTTACCCTCGAAACTaGACCGATGCTCCGGACGTTGAACGGGCGCGCGCA | + |
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Preference number: 6 (lower is better) Translates to: STSPRQRLYPRN*TDAPDVERARA Trigger: TGCGCGCGCCCGTTCAACGTCCGGAGCATCGGTGCAGTTTCGAGGGTAAAGCCTTTGGCGCGGTGATGTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481123.1 |
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| CDS GCA 72 bp | CCAAGCCAGCAGACTCCTCCACCGAGCGCTCACCCTTaGCATGAAATTCCTGATGTAGGGCCACATGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: PSQQTPPPSAHP*HEIPDVGPHVS Trigger: GGAAACATGTGGCCCTACATCAGGAATTTCATGGCAAGGGTGAGCGCTCGGTGGAGGAGTCTGCTGGCTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000297534.7 ENST00000468383.5 ENST00000481123.1 ENST00000482181.1 ENST00000488886.1 |
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| CDS TCA 72 bp | AAGGTCAGGGGATCGAGACCATCCTGGCTAACACGGTaGAACCCTGTCTCTGCCTATCCCACGAAACCACAC | + |
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Preference number: 6 (lower is better) Translates to: KVRGSRPSWLTR*NPVSAYPTKPH Trigger: GTGTGGTTTCGTGGGATAGGCAGAGACAGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCCCCTGACCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488886.1 |
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| CDS CCA 72 bp | CATGTTTCCGGATGCTACGCAGGAGGCAGAGATAGGTaGCAGCTTGGAAATGAAGCTCATGTTGGGCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: HVSGCYAGGRDR*QLGNEAHVGLC Trigger: GCAGAGCCCAACATGAGCTTCATTTCCAAGCTGCCACCTATCTCTGCCTCCTGCGTAGCATCCGGAAACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000297534.7 ENST00000468383.5 ENST00000481123.1 ENST00000482181.1 ENST00000488886.1 |
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| CDS GCA 72 bp | CATGAAATTCCTGATGTAGGGCCACATGTTTCCGGATaGTACGCAGGAGGCAGAGATAGGTGGCAGCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: HEIPDVGPHVSG*YAGGRDRWQLG Trigger: TCCAAGCTGCCACCTATCTCTGCCTCCTGCGTAGCATCCGGAAACATGTGGCCCTACATCAGGAATTTCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000297534.7 ENST00000468383.5 ENST00000481123.1 ENST00000482181.1 ENST00000488886.1 |
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| CDS CAA 90 bp | CACATGTTTCCGGATGCTACGCAGGAGGCAGAGATAGGTGGCAGCTaGGAAATGAAGCTCATGTTGGGCTCTGCACAACTTTTCACTGGT | + |
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Preference number: 6 (lower is better) Translates to: HMFPDATQEAEIGGS*EMKLMLGSAQLFTG Trigger: ACCAGTGAAAAGTTGTGCAGAGCCCAACATGAGCTTCATTTCCAAGCTGCCACCTATCTCTGCCTCCTGCGTAGCATCCGGAAACATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000297534.7 ENST00000468383.5 ENST00000481123.1 ENST00000482181.1 ENST00000488886.1 |
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| CDS CAA 72 bp | GCAGAGATAGGTGGCAGCTTGGAAATGAAGCTCATGTaGGGCTCTGCACAACTTTTCACTGGTGACCCGATG | + |
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Preference number: 6 (lower is better) Translates to: AEIGGSLEMKLM*GSAQLFTGDPM Trigger: CATCGGGTCACCAGTGAAAAGTTGTGCAGAGCCCAACATGAGCTTCATTTCCAAGCTGCCACCTATCTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297534.7 |
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| CDS CAA 72 bp | GCAGAGATAGGTGGCAGCTTGGAAATGAAGCTCATGTaGGGCTCTGCACAACTTTTCACTGGTGACCTAGCG | + |
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Preference number: 6 (lower is better) Translates to: AEIGGSLEMKLM*GSAQLFTGDLA Trigger: CGCTAGGTCACCAGTGAAAAGTTGTGCAGAGCCCAACATGAGCTTCATTTCCAAGCTGCCACCTATCTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482181.1 |
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| CDS CAA 72 bp | GCAGAGATAGGTGGCAGCTTGGAAATGAAGCTCATGTaGGGCTCTGCACAACTTTTCACTGGTGACCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: AEIGGSLEMKLM*GSAQLFTGDPL Trigger: CAAAGGGTCACCAGTGAAAAGTTGTGCAGAGCCCAACATGAGCTTCATTTCCAAGCTGCCACCTATCTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468383.5 |
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| CDS CAA 72 bp | GCAGAGATAGGTGGCAGCTTGGAAATGAAGCTCATGTaGGGCTCTGCACAACTTTTCACTGGTGACCCTATC | + |
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Preference number: 6 (lower is better) Translates to: AEIGGSLEMKLM*GSAQLFTGDPI Trigger: GATAGGGTCACCAGTGAAAAGTTGTGCAGAGCCCAACATGAGCTTCATTTCCAAGCTGCCACCTATCTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481123.1 |
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| CDS GCA 72 bp | TACATATTGATAGAAATTATTCAATTCTCCTATGAATaGAGCATCCAAGGATATTCTCCATGTTCATGGCTC | + |
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Preference number: 6 (lower is better) Translates to: YILIEIIQFSYE*SIQGYSPCSWL Trigger: GAGCCATGAACATGGAGAATATCCTTGGATGCTGCATTCATAGGAGAATTGAATAATTTCTATCAATATGTA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000297534.7 ENST00000468383.5 ENST00000481123.1 ENST00000482181.1 ENST00000488886.1 |
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