RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FLYWCH1 (Homo sapiens)

Ensembl gene IDs: ENSG00000059122

Ensembl transcript IDs: ENST00000253928.14, ENST00000344592.9, ENST00000416288.6, ENST00000570425.5, ENST00000570752.5, ENST00000570759.1, ENST00000571580.1, ENST00000571983.5, ENST00000573564.5, ENST00000574985.1, ENST00000575679.1

Found 754 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGCGGAGCGAGGCCTCTGGTTTGGCCAGCTCCGGTTGCTGGGGATaGCCACACCCTGGCAGCAGGCGGCCAGAGACCAGGAAGGCCTAC +
Preference number: 1 (lower is better)
Translates to: VRSEASGLASSGCWG*PHPGSRRPETRKAY
Trigger: GTAGGCCTTCCTGGTCTCTGGCCGCCTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCAGAGGCCTCGCTCCGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
3UTR CCA 90 bp ACCCAGGATGCCGCTGGCCTCAGCCAGGGCACGTGTGCCCAGCGCTaGCTCCTGCTGACCCCTGGACTGGCTCCCATCTCGGGAATGACG +
Preference number: 1 (lower is better)
Translates to: TQDAAGLSQGTCAQR*LLLTPGLAPISGMT
Trigger: CGTCATTCCCGAGATGGGAGCCAGTCCAGGGGTCAGCAGGAGCCAGCGCTGGGCACACGTGCCCTGGCTGAGGCCAGCGGCATCCTGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR CCA 90 bp GGCCTCTGGTTTGGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTaGCAGCAGGCGGCCAGAGACCAGGAAGGCCTACCCAGCACCTGT +
Preference number: 1 (lower is better)
Translates to: GLWFGQLRLLGMATP*QQAARDQEGLPSTC
Trigger: ACAGGTGCTGGGTAGGCCTTCCTGGTCTCTGGCCGCCTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCAGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
3UTR CCA 90 bp CCTCAGCCAGGGCACGTGTGCCCAGCGCTGGCTCCTGCTGACCCCTaGACTGGCTCCCATCTCGGGAATGACGCCTGCCGTGGGAATCGT +
Preference number: 1 (lower is better)
Translates to: PQPGHVCPALAPADP*TGSHLGNDACRGNR
Trigger: ACGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAGCCAGTCCAGGGGTCAGCAGGAGCCAGCGCTGGGCACACGTGCCCTGGCTGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR CCA 90 bp AGCAGGGCATGGCATCATGTGACCATGGCGGGAAGATGCTGGCCGTaGAGGCCCCATCACAGAGGCAAGGAGCCCACAGGTGGAGGGCGC +
Preference number: 1 (lower is better)
Translates to: SRAWHHVTMAGRCWP*RPHHRGKEPTGGGR
Trigger: GCGCCCTCCACCTGTGGGCTCCTTGCCTCTGTGATGGGGCCTCCACGGCCAGCATCTTCCCGCCATGGTCACATGATGCCATGCCCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR GCA 90 bp GGTGCCCAGAGCAGGGCATGGCATCATGTGACCATGGCGGGAAGATaGTGGCCGTGGAGGCCCCATCACAGAGGCAAGGAGCCCACAGGT +
Preference number: 1 (lower is better)
Translates to: GAQSRAWHHVTMAGR*WPWRPHHRGKEPTG
Trigger: ACCTGTGGGCTCCTTGCCTCTGTGATGGGGCCTCCACGGCCAGCATCTTCCCGCCATGGTCACATGATGCCATGCCCTGCTCTGGGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CCA 90 bp GAGCACAGAAAGGAAAGTGTGGAGTGCGGAGCGAGGCCTCTGGTTTaGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTGGCAGCAGGC +
Preference number: 1 (lower is better)
Translates to: EHRKESVECGARPLV*PAPVAGDGHTLAAG
Trigger: GCCTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTTTCTGTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
3UTR CCA 90 bp GGAGAAGCAGGGGTGCCCAGGCTGTCACAGCCTTGCAGTGCATGGTaGGTTCCGTGGCCAACTTGCCAGGGGACAGGCCTGTTGCTGGCA +
Preference number: 1 (lower is better)
Translates to: GEAGVPRLSQPCSAW*VPWPTCQGTGLLLA
Trigger: TGCCAGCAACAGGCCTGTCCCCTGGCAAGTTGGCCACGGAACCCACCATGCACTGCAAGGCTGTGACAGCCTGGGCACCCCTGCTTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR CCA 90 bp GCCCAGAGCAGGGCATGGCATCATGTGACCATGGCGGGAAGATGCTaGCCGTGGAGGCCCCATCACAGAGGCAAGGAGCCCACAGGTGGA +
Preference number: 1 (lower is better)
Translates to: AQSRAWHHVTMAGRC*PWRPHHRGKEPTGG
Trigger: TCCACCTGTGGGCTCCTTGCCTCTGTGATGGGGCCTCCACGGCCAGCATCTTCCCGCCATGGTCACATGATGCCATGCCCTGCTCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR TCA 90 bp GCCACCGCCCTGCCCCACGACAGCTGCGTCTGCAAGCGCCAGCTCTaGGCACTGTTCTCCGCCGACATGAGGACACCATCCAAGAATTCC +
Preference number: 1 (lower is better)
Translates to: ATALPHDSCVCKRQL*ALFSADMRTPSKNS
Trigger: GGAATTCTTGGATGGTGTCCTCATGTCGGCGGAGAACAGTGCTCAGAGCTGGCGCTTGCAGACGCAGCTGTCGTGGGGCAGGGCGGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR TCA 90 bp CCTCATACCCGCTTAGGGGTGCCCAGAGCAGGGCATGGCATCATGTaGCCATGGCGGGAAGATGCTGGCCGTGGAGGCCCCATCACAGAG +
Preference number: 1 (lower is better)
Translates to: PHTRLGVPRAGHGIM*PWREDAGRGGPITE
Trigger: CTCTGTGATGGGGCCTCCACGGCCAGCATCTTCCCGCCATGGTCACATGATGCCATGCCCTGCTCTGGGCACCCCTAAGCGGGTATGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR GCA 90 bp GACCTCGCGGCTGCGGACAGGTCCTTGTTAGTAAGGAGGAGGCTCTaGAGTCCCGGTGGGGTCATCTTGCCTCTCCGGACTGCTCCCTCT +
Preference number: 1 (lower is better)
Translates to: DLAAADRSLLVRRRL*SPGGVILPLRTAPS
Trigger: AGAGGGAGCAGTCCGGAGAGGCAAGATGACCCCACCGGGACTGCAGAGCCTCCTCCTTACTAACAAGGACCTGTCCGCAGCCGCGAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR GCA 90 bp CGTACAAGCAGAGGAGAAGCAGGGGTGCCCAGGCTGTCACAGCCTTaGAGTGCATGGTGGGTTCCGTGGCCAACTTGCCAGGGGACAGGC +
Preference number: 1 (lower is better)
Translates to: RTSRGEAGVPRLSQP*SAWWVPWPTCQGTG
Trigger: GCCTGTCCCCTGGCAAGTTGGCCACGGAACCCACCATGCACTGCAAGGCTGTGACAGCCTGGGCACCCCTGCTTCTCCTCTGCTTGTACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR CCA 90 bp GGAAGGAGCACAGAAAGGAAAGTGTGGAGTGCGGAGCGAGGCCTCTaGTTTGGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTGGCAG +
Preference number: 1 (lower is better)
Translates to: GRSTERKVWSAERGL*FGQLRLLGMATPWQ
Trigger: CTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTTTCTGTGCTCCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
3UTR CCA 90 bp AGAGGAGAAGCAGGGGTGCCCAGGCTGTCACAGCCTTGCAGTGCATaGTGGGTTCCGTGGCCAACTTGCCAGGGGACAGGCCTGTTGCTG +
Preference number: 1 (lower is better)
Translates to: RGEAGVPRLSQPCSA*WVPWPTCQGTGLLL
Trigger: CAGCAACAGGCCTGTCCCCTGGCAAGTTGGCCACGGAACCCACCATGCACTGCAAGGCTGTGACAGCCTGGGCACCCCTGCTTCTCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR CCA 90 bp TGGTCCAGGTTACGTCTGGGCCAGGTGACTGTAACAGCCCAGGCATaGGGAGGGGTCTCCCCCTGGGCACTGGCATGGAGATGTGACGGA +
Preference number: 1 (lower is better)
Translates to: WSRLRLGQVTVTAQA*GGVSPWALAWRCDG
Trigger: TCCGTCACATCTCCATGCCAGTGCCCAGGGGGAGACCCCTCCCCATGCCTGGGCTGTTACAGTCACCTGGCCCAGACGTAACCTGGACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CCA 90 bp GCAGCCCTTCCAGAGGCCCCAACCCCAGGTGTCTCCGTCCACTCTTaGTCCAGGTTACGTCTGGGCCAGGTGACTGTAACAGCCCAGGCA +
Preference number: 1 (lower is better)
Translates to: AALPEAPTPGVSVHS*SRLRLGQVTVTAQA
Trigger: TGCCTGGGCTGTTACAGTCACCTGGCCCAGACGTAACCTGGACCAAGAGTGGACGGAGACACCTGGGGTTGGGGCCTCTGGAAGGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR TCA 90 bp AACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACCGTGCTaGGCAGAGCGGGGCCTCGCCAGGTGGAAAGCCCTAGGAAGGCTG +
Preference number: 1 (lower is better)
Translates to: NVPRLQDSSIHFAPC*AERGLARWKALGRL
Trigger: CAGCCTTCCTAGGGCTTTCCACCTGGCGAGGCCCCGCTCTGCTCAGCACGGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
3UTR GCA 90 bp GCAGCTTTGTCATGTCTTCCAAAGGTCAGGAAGGCGCCACCGCCCTaGCCCACGACAGCTGCGTCTGCAAGCGCCAGCTCTGAGCACTGT +
Preference number: 1 (lower is better)
Translates to: AALSCLPKVRKAPPP*PTTAASASASSEHC
Trigger: ACAGTGCTCAGAGCTGGCGCTTGCAGACGCAGCTGTCGTGGGGCAGGGCGGTGGCGCCTTCCTGACCTTTGGAAGACATGACAAAGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR GCA 90 bp GAGGGCGCAGGCTTGGCAGGTAGCAGAGGCTGCAGTGACTCAGGCTaGTGTGACCCGGGCGTTTCTCTCGTATCTTGGGCATGTGGAGAG +
Preference number: 1 (lower is better)
Translates to: EGAGLAGSRGCSDSG*CDPGVSLVSWACGE
Trigger: CTCTCCACATGCCCAAGATACGAGAGAAACGCCCGGGTCACAGCAGCCTGAGTCACTGCAGCCTCTGCTACCTGCCAAGCCTGCGCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CCA 90 bp GAAAGCCCTAGGAAGGCTGCGTGCTCTGCAAACCCAGGGGTGCTGTaGCCGTACAGCAGGGGCGTCCGTGTCCAGGCAGCTTTGTCATGT +
Preference number: 1 (lower is better)
Translates to: ESPRKAACSANPGVL*PYSRGVRVQAALSC
Trigger: ACATGACAAAGCTGCCTGGACACGGACGCCCCTGCTGTACGGCCACAGCACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGGGCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
3UTR CCA 90 bp GCCACTGTGTTGTGTGTCCTCTGCCATAGGCAAAGGATGGACGGGTaGGCAAGTCTGCCCTTGGCCCAGGGGTGCCACTTGCCCAGGCTT +
Preference number: 1 (lower is better)
Translates to: ATVLCVLCHRQRMDG*ASLPLAQGCHLPRL
Trigger: AAGCCTGGGCAAGTGGCACCCCTGGGCCAAGGGCAGACTTGCCCACCCGTCCATCCTTTGCCTATGGCAGAGGACACACAACACAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CCA 90 bp TCGGGATTGGAGTACTGGGTCTGTAGCCTTGGCCATGAGTCCAGCTaGGGGCAGTTAGGTCAGCCTCGGGGCAGGATGCTTCAGGGCCGA +
Preference number: 1 (lower is better)
Translates to: SGLEYWVCSLGHESS*GQLGQPRGRMLQGR
Trigger: TCGGCCCTGAAGCATCCTGCCCCGAGGCTGACCTAACTGCCCCCAGCTGGACTCATGGCCAAGGCTACAGACCCAGTACTCCAATCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR TCA 90 bp GGACTGCTCCCTCTGACTGGTGAAGCCACACTCTGTGAAGCTGTCTaGCAGAAGGGGACACGCCTTTGCTGCCCAGGATGGACCTGGGCC +
Preference number: 1 (lower is better)
Translates to: GLLPLTGEATLCEAV*QKGTRLCCPGWTWA
Trigger: GGCCCAGGTCCATCCTGGGCAGCAAAGGCGTGTCCCCTTCTGTCAGACAGCTTCACAGAGTGTGGCTTCACCAGTCAGAGGGAGCAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR GCA 90 bp AACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTaGACCGTGCTGAGCAGAGCGGGGCCTCGCCAGGTGGAAAGCCCT +
Preference number: 1 (lower is better)
Translates to: NFPKRAQAPRQQHSL*TVLSRAGPRQVESP
Trigger: AGGGCTTTCCACCTGGCGAGGCCCCGCTCTGCTCAGCACGGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
3UTR GCA 90 bp AGGCAAAGGATGGACGGGTGGGCAAGTCTGCCCTTGGCCCAGGGGTaGCACTTGCCCAGGCTTATGCAGATGAGTCTAGGCGTAACGCAG +
Preference number: 1 (lower is better)
Translates to: RQRMDGWASLPLAQG*HLPRLMQMSLGVTQ
Trigger: CTGCGTTACGCCTAGACTCATCTGCATAAGCCTGGGCAAGTGGCACCCCTGGGCCAAGGGCAGACTTGCCCACCCGTCCATCCTTTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR GCA 90 bp GCCGAGAACAGTGCCCAAAGCGCAGCCACTGTGTTGTGTGTCCTCTaGCATAGGCAAAGGATGGACGGGTGGGCAAGTCTGCCCTTGGCC +
Preference number: 1 (lower is better)
Translates to: AENSAQSAATVLCVL*HRQRMDGWASLPLA
Trigger: GGCCAAGGGCAGACTTGCCCACCCGTCCATCCTTTGCCTATGGCAGAGGACACACAACACAGTGGCTGCGCTTTGGGCACTGTTCTCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR GCA 90 bp CGGGCGTTTCTCTCGTATCTTGGGCATGTGGAGAGCTTCCCCTTCTaGAGGGGGCCTGATCAGAGGTCCAGCTGGTGGCGGCATGAACTG +
Preference number: 1 (lower is better)
Translates to: RAFLSYLGHVESFPF*RGPDQRSSWWRHEL
Trigger: CAGTTCATGCCGCCACCAGCTGGACCTCTGATCAGGCCCCCTGCAGAAGGGGAAGCTCTCCACATGCCCAAGATACGAGAGAAACGCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CCA 90 bp AAAGCGCAGCCACTGTGTTGTGTGTCCTCTGCCATAGGCAAAGGATaGACGGGTGGGCAAGTCTGCCCTTGGCCCAGGGGTGCCACTTGC +
Preference number: 1 (lower is better)
Translates to: KAQPLCCVSSAIGKG*TGGQVCPWPRGATC
Trigger: GCAAGTGGCACCCCTGGGCCAAGGGCAGACTTGCCCACCCGTCCATCCTTTGCCTATGGCAGAGGACACACAACACAGTGGCTGCGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CCA 90 bp TCTGCAGGGGGCCTGATCAGAGGTCCAGCTGGTGGCGGCATGAACTaGACCATCTTTCAGCAAGTACCTTCCTCGGGCATGGCTGCCTCC +
Preference number: 1 (lower is better)
Translates to: SAGGLIRGPAGGGMN*TIFQQVPSSGMAAS
Trigger: GGAGGCAGCCATGCCCGAGGAAGGTACTTGCTGAAAGATGGTCCAGTTCATGCCGCCACCAGCTGGACCTCTGATCAGGCCCCCTGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR TCA 90 bp TCTGCTAAGCCAAACCTAGGTGGATGGGAAGTGCCTGTGTGGATGTaGAGCCACCTTGGGTGGGCGGCTCGGAGCTCCTCTGCCCACATC +
Preference number: 1 (lower is better)
Translates to: SAKPNLGGWEVPVWM*SHLGWAARSSSAHI
Trigger: GATGTGGGCAGAGGAGCTCCGAGCCGCCCACCCAAGGTGGCTTCACATCCACACAGGCACTTCCCATCCACCTAGGTTTGGCTTAGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR TCA 90 bp GCTGCGTCTGCAAGCGCCAGCTCTGAGCACTGTTCTCCGCCGACATaGGGACACCATCCAAGAATTCCTCCTGGGAGACCTCCTGAGGAG +
Preference number: 1 (lower is better)
Translates to: AASASASSEHCSPPT*GHHPRIPPGRPPEE
Trigger: CTCCTCAGGAGGTCTCCCAGGAGGAATTCTTGGATGGTGTCCTCATGTCGGCGGAGAACAGTGCTCAGAGCTGGCGCTTGCAGACGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR TCA 90 bp CTGCAGTCCCGGTGGGGTCATCTTGCCTCTCCGGACTGCTCCCTCTaGCTGGTGAAGCCACACTCTGTGAAGCTGTCTGACAGAAGGGGA +
Preference number: 1 (lower is better)
Translates to: LQSRWGHLASPDCSL*LVKPHSVKLSDRRG
Trigger: TCCCCTTCTGTCAGACAGCTTCACAGAGTGTGGCTTCACCAGTCAGAGGGAGCAGTCCGGAGAGGCAAGATGACCCCACCGGGACTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR GCA 90 bp CTTAGTGGCTGTCAGGCCCTTGTCATGGCTGAGTGGCCACCAGGGTaGGGGTTGGTGGCCATGAAGCCACCCAAGGCAACAGCATCATCT +
Preference number: 1 (lower is better)
Translates to: LSGCQALVMAEWPPG*GLVAMKPPKATASS
Trigger: AGATGATGCTGTTGCCTTGGGTGGCTTCATGGCCACCAACCCGCACCCTGGTGGCCACTCAGCCATGACAAGGGCCTGACAGCCACTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CCA 90 bp GGAGGGGTCTCCCCCTGGGCACTGGCATGGAGATGTGACGGAGTGTaGTTTCACGGCGGCCAACTGTTGCTGCAAGAGGGATGTGAACAA +
Preference number: 1 (lower is better)
Translates to: GGVSPWALAWRCDGV*FHGGQLLLQEGCEQ
Trigger: TTGTTCACATCCCTCTTGCAGCAACAGTTGGCCGCCGTGAAACCACACTCCGTCACATCTCCATGCCAGTGCCCAGGGGGAGACCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CCA 90 bp CTCCTGTGGGCGTACACATTTGGACCACACAGTGGGAGTCGGGATTaGAGTACTGGGTCTGTAGCCTTGGCCATGAGTCCAGCTGGGGGC +
Preference number: 1 (lower is better)
Translates to: LLWAYTFGPHSGSRD*STGSVALAMSPAGG
Trigger: GCCCCCAGCTGGACTCATGGCCAAGGCTACAGACCCAGTACTCCAATCCCGACTCCCACTGTGTGGTCCAAATGTGTACGCCCACAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CCA 90 bp CGGGCATGGCTGCCTCCTGTGGGCGTACACATTTGGACCACACAGTaGGAGTCGGGATTGGAGTACTGGGTCTGTAGCCTTGGCCATGAG +
Preference number: 1 (lower is better)
Translates to: RAWLPPVGVHIWTTQ*ESGLEYWVCSLGHE
Trigger: CTCATGGCCAAGGCTACAGACCCAGTACTCCAATCCCGACTCCCACTGTGTGGTCCAAATGTGTACGCCCACAGGAGGCAGCCATGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CCA 90 bp GAGAGCTTCCCCTTCTGCAGGGGGCCTGATCAGAGGTCCAGCTGGTaGCGGCATGAACTGGACCATCTTTCAGCAAGTACCTTCCTCGGG +
Preference number: 1 (lower is better)
Translates to: ESFPFCRGPDQRSSW*RHELDHLSASTFLG
Trigger: CCCGAGGAAGGTACTTGCTGAAAGATGGTCCAGTTCATGCCGCCACCAGCTGGACCTCTGATCAGGCCCCCTGCAGAAGGGGAAGCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CCA 90 bp GTGGAGAGCTTCCCCTTCTGCAGGGGGCCTGATCAGAGGTCCAGCTaGTGGCGGCATGAACTGGACCATCTTTCAGCAAGTACCTTCCTC +
Preference number: 1 (lower is better)
Translates to: VESFPFCRGPDQRSS*WRHELDHLSASTFL
Trigger: GAGGAAGGTACTTGCTGAAAGATGGTCCAGTTCATGCCGCCACCAGCTGGACCTCTGATCAGGCCCCCTGCAGAAGGGGAAGCTCTCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR TCA 90 bp AGAGATTGGTGTGGGTTGACCTGGCCTATGCGGGGCAGCTCAGTTTaGAGCAGGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAG +
Preference number: 1 (lower is better)
Translates to: RDWCGLTWPMRGSSV*SRNFPKRAQAPRQQ
Trigger: CTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCCTGCTTCAAACTGAGCTGCCCCGCATAGGCCAGGTCAACCCACACCAATCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
3UTR GCA 90 bp GCCTATGCGGGGCAGCTCAGTTTGAAGCAGGAACTTCCCCAAACGTaGCCAGGCTCCAAGACAGCAGCATTCACTTTGCACCGTGCTGAG +
Preference number: 1 (lower is better)
Translates to: AYAGQLSLKQELPQT*PGSKTAAFTLHRAE
Trigger: CTCAGCACGGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCCTGCTTCAAACTGAGCTGCCCCGCATAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
3UTR CCA 90 bp GAGACCAGGAAGGCCTACCCAGCACCTGTCCAGAAGAGATTGGTGTaGGTTGACCTGGCCTATGCGGGGCAGCTCAGTTTGAAGCAGGAA +
Preference number: 1 (lower is better)
Translates to: ETRKAYPAPVQKRLV*VDLAYAGQLSLKQE
Trigger: TTCCTGCTTCAAACTGAGCTGCCCCGCATAGGCCAGGTCAACCCACACCAATCTCTTCTGGACAGGTGCTGGGTAGGCCTTCCTGGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
3UTR CCA 90 bp GGCGTACACATTTGGACCACACAGTGGGAGTCGGGATTGGAGTACTaGGTCTGTAGCCTTGGCCATGAGTCCAGCTGGGGGCAGTTAGGT +
Preference number: 1 (lower is better)
Translates to: GVHIWTTQWESGLEY*VCSLGHESSWGQLG
Trigger: ACCTAACTGCCCCCAGCTGGACTCATGGCCAAGGCTACAGACCCAGTACTCCAATCCCGACTCCCACTGTGTGGTCCAAATGTGTACGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CCA 90 bp AAGTACCTTCCTCGGGCATGGCTGCCTCCTGTGGGCGTACACATTTaGACCACACAGTGGGAGTCGGGATTGGAGTACTGGGTCTGTAGC +
Preference number: 1 (lower is better)
Translates to: KYLPRAWLPPVGVHI*TTQWESGLEYWVCS
Trigger: GCTACAGACCCAGTACTCCAATCCCGACTCCCACTGTGTGGTCCAAATGTGTACGCCCACAGGAGGCAGCCATGCCCGAGGAAGGTACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR TCA 90 bp CCCTTGTCATGGCTGAGTGGCCACCAGGGTGCGGGTTGGTGGCCATaGAGCCACCCAAGGCAACAGCATCATCTAAATTCACGTCCATTG +
Preference number: 1 (lower is better)
Translates to: PLSWLSGHQGAGWWP*SHPRQQHHLNSRPL
Trigger: CAATGGACGTGAATTTAGATGATGCTGTTGCCTTGGGTGGCTTCATGGCCACCAACCCGCACCCTGGTGGCCACTCAGCCATGACAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR GCA 90 bp CATGAACTGGACCATCTTTCAGCAAGTACCTTCCTCGGGCATGGCTaGCTCCTGTGGGCGTACACATTTGGACCACACAGTGGGAGTCGG +
Preference number: 1 (lower is better)
Translates to: HELDHLSASTFLGHG*LLWAYTFGPHSGSR
Trigger: CCGACTCCCACTGTGTGGTCCAAATGTGTACGCCCACAGGAGGCAGCCATGCCCGAGGAAGGTACTTGCTGAAAGATGGTCCAGTTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CCA 90 bp GACCATCTTTCAGCAAGTACCTTCCTCGGGCATGGCTGCCTCCTGTaGGCGTACACATTTGGACCACACAGTGGGAGTCGGGATTGGAGT +
Preference number: 1 (lower is better)
Translates to: DHLSASTFLGHGCLL*AYTFGPHSGSRDWS
Trigger: ACTCCAATCCCGACTCCCACTGTGTGGTCCAAATGTGTACGCCCACAGGAGGCAGCCATGCCCGAGGAAGGTACTTGCTGAAAGATGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR GCA 90 bp CATGGAGATGTGACGGAGTGTGGTTTCACGGCGGCCAACTGTTGCTaGAAGAGGGATGTGAACAAGTACCAGCTCCACACGGTGAGATGG +
Preference number: 1 (lower is better)
Translates to: HGDVTECGFTAANCC*KRDVNKYQLHTVRW
Trigger: CCATCTCACCGTGTGGAGCTGGTACTTGTTCACATCCCTCTTGCAGCAACAGTTGGCCGCCGTGAAACCACACTCCGTCACATCTCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR GCA 90 bp TGGCATGGAGATGTGACGGAGTGTGGTTTCACGGCGGCCAACTGTTaGTGCAAGAGGGATGTGAACAAGTACCAGCTCCACACGGTGAGA +
Preference number: 1 (lower is better)
Translates to: WHGDVTECGFTAANC*CKRDVNKYQLHTVR
Trigger: TCTCACCGTGTGGAGCTGGTACTTGTTCACATCCCTCTTGCAGCAACAGTTGGCCGCCGTGAAACCACACTCCGTCACATCTCCATGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR GCA 90 bp ATGAGTCTAGGCGTAACGCAGGCTAATGGCGAGAACAGAGCATCCTaGCTCTTCCAGCAACACGACGCAAATGTCCTGCCATATCCGGGC +
Preference number: 1 (lower is better)
Translates to: MSLGVTQANGENRAS*LFQQHDANVLPYPG
Trigger: GCCCGGATATGGCAGGACATTTGCGTCGTGTTGCTGGAAGAGGCAGGATGCTCTGTTCTCGCCATTAGCCTGCGTTACGCCTAGACTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR GCA 90 bp TCTAAATTCACGTCCATTGGAGAATCTCAGCCCAGCAACGCGAGCTaGCGTCTGTCTTCTAAGGTCAAAGCAGGCGTGAGGCAGAGGAAG +
Preference number: 1 (lower is better)
Translates to: SKFTSIGESQPSNAS*RLSSKVKAGVRQRK
Trigger: CTTCCTCTGCCTCACGCCTGCTTTGACCTTAGAAGACAGACGGCAGCTCGCGTTGCTGGGCTGAGATTCTCCAATGGACGTGAATTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR GCA 90 bp TTGTTGGCACTGTCATGTCAAAGGGCACGGACACACACCATGTGGTaGAAATGTCATACAGCAGGGTTTGTGGGCGAAGCACCAGCAGAG +
Preference number: 1 (lower is better)
Translates to: LLALSCQRARTHTMW*KCHTAGFVGEAPAE
Trigger: CTCTGCTGGTGCTTCGCCCACAAACCCTGCTGTATGACATTTGCACCACATGGTGTGTGTCCGTGCCCTTTGACATGACAGTGCCAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR TCA 90 bp CAAAGCAGGCGTGAGGCAGAGGAAGAGTGGGCCAGTCCCGGTCAATaGCGCAAATATCCAAAAGGGAAGAGAAGCCGATATTCTTCCTCT +
Preference number: 1 (lower is better)
Translates to: QSRREAEEEWASPGQ*RKYPKGKRSRYSSS
Trigger: AGAGGAAGAATATCGGCTTCTCTTCCCTTTTGGATATTTGCGTCATTGACCGGGACTGGCCCACTCTTCCTCTGCCTCACGCCTGCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CCA 90 bp ATGTTGTTGGCACTGTCATGTCAAAGGGCACGGACACACACCATGTaGTGCAAATGTCATACAGCAGGGTTTGTGGGCGAAGCACCAGCA +
Preference number: 1 (lower is better)
Translates to: MLLALSCQRARTHTM*CKCHTAGFVGEAPA
Trigger: TGCTGGTGCTTCGCCCACAAACCCTGCTGTATGACATTTGCACCACATGGTGTGTGTCCGTGCCCTTTGACATGACAGTGCCAACAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CCA 90 bp TTTCTGATGCCTTGGGGATTTATTTTAAATTTCATGAGATGTTGTTaGCACTGTCATGTCAAAGGGCACGGACACACACCATGTGGTGCA +
Preference number: 1 (lower is better)
Translates to: FLMPWGFILNFMRCC*HCHVKGHGHTPCGA
Trigger: TGCACCACATGGTGTGTGTCCGTGCCCTTTGACATGACAGTGCCAACAACATCTCATGAAATTTAAAATAAATCCCCAAGGCATCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253928.14
3UTR CAA 90 bp GGGGTGCTGTGGCCGTACAGCAGGGGCGTCCGTGTCCAGGCAGCTTaGTCATGTCTTCCAAAGGTCAGGAAGGCGCCACCGCCCTGCCCC +
Preference number: 2 (lower is better)
Translates to: GVLWPYSRGVRVQAA*SCLPKVRKAPPPCP
Trigger: GGGGCAGGGCGGTGGCGCCTTCCTGACCTTTGGAAGACATGACAAAGCTGCCTGGACACGGACGCCCCTGCTGTACGGCCACAGCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR-3UTR TCA 90 bp TGTGGAGTGCGGAGCGAGGCCTCTGGTTTGGCCAGCTCCGGTTGCTGGGGATGGTGCAAGCGCCAGCTCTaGGCACTGTTCTCCGCCGAC +
Preference number: 2 (lower is better)
Translates to: CGVRSEASGLASSGCWGWCKRQL*ALFSAD
Trigger: GTCGGCGGAGAACAGTGCTCAGAGCTGGCGCTTGCA...CCATCCCCAGCAACCGGAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR-3UTR TCA 90 bp GTCCAGCTGGGGGCAGTTAGGTCAGCCTCGGGGCAGGATGCTTCAGGGCCGAGAATTACAGGGTGGGAGTaGAGGACCTCGCGGCTGCGG +
Preference number: 2 (lower is better)
Translates to: VQLGAVRSASGQDASGPRITGWE*RTSRLR
Trigger: CCGCAGCCGCGAGGTCCTTCACTCCCACCCTGTAAT...TCTCGGCCCTGAAGCATCCTGCCCCGAGGCTGACCTAACTGCCCCCAGCTGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR GCA 90 bp AGGAGGCTCTGCAGTCCCGGTGGGGTCATCTTGCCTCTCCGGACTGCTCCCTCTCTGCCCCACGACAGCTaGGTCTGCAAGCGCCAGCTC +
Preference number: 2 (lower is better)
Translates to: RRLCSPGGVILPLRTAPSLPHDS*VCKRQL
Trigger: GAGCTGGCGCTTGCAGACGCAGCTGTCGTGGGGCAG...AGAGGGAGCAGTCCGGAGAGGCAAGATGACCCCACCGGGACTGCAGAGCCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR-3UTR CCA 90 bp CTGACAGAAGGGGACACGCCTTTGCTGCCCAGGATGGACCTGGGCCACCCAGGAAACCCAGGGGTGCTGTaGCCGTACAGCAGGGGCGTC +
Preference number: 2 (lower is better)
Translates to: LTEGDTPLLPRMDLGHPGNPGVL*PYSRGV
Trigger: GACGCCCCTGCTGTACGGCCACAGCACCCCTGGGTT...TCCTGGGTGGCCCAGGTCCATCCTGGGCAGCAAAGGCGTGTCCCCTTCTGTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR-3UTR CCA 90 bp TGGGGGCAGTTAGGTCAGCCTCGGGGCAGGATGCTTCAGGGCCGAGAACAGTGCCGGGGCCTCGCCAGGTaGAAAGCCCTAGGAAGGCTG +
Preference number: 2 (lower is better)
Translates to: WGQLGQPRGRMLQGREQCRGLAR*KALGRL
Trigger: CAGCCTTCCTAGGGCTTTCCACCTGGCGAGGCCCCG...GCACTGTTCTCGGCCCTGAAGCATCCTGCCCCGAGGCTGACCTAACTGCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR CCA 90 bp CTGACCCCTGGACTGGCTCCCATCTCGGGAATGACGCCTGCCGTGGGAATCGTGGCGGAGCGAGGCCTCTaGTTTGGCCAGCTCCGGTTG +
Preference number: 2 (lower is better)
Translates to: LTPGLAPISGMTPAVGIVAERGL*FGQLRL
Trigger: CAACCGGAGCTGGCCAAACCAGAGGCCTCGCTCCGC...CACGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAGCCAGTCCAGGGGTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
3UTR-3UTR CCA 90 bp AGGAGGCTCTGCAGTCCCGGTGGGGTCATCTTGCCTCTCCGGACTGCTCCCTCTGCGGAGCGAGGCCTCTaGTTTGGCCAGCTCCGGTTG +
Preference number: 2 (lower is better)
Translates to: RRLCSPGGVILPLRTAPSAERGL*FGQLRL
Trigger: CAACCGGAGCTGGCCAAACCAGAGGCCTCGCTCCGC...AGAGGGAGCAGTCCGGAGAGGCAAGATGACCCCACCGGGACTGCAGAGCCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR CAA 90 bp GGAGCACAGAAAGGAAAGTGTGGAGTGCGGAGCGAGGCCTCTGGTTaGGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTGGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: GAQKGKCGVRSEASG*ASSGCWGWPHPGSR
Trigger: CCTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTTTCTGTGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
3UTR-3UTR TCA 90 bp CCTGGACTGGCTCCCATCTCGGGAATGACGCCTGCCGTGGGAATCGTGGAGAGGTGCAAGCGCCAGCTCTaGGCACTGTTCTCCGCCGAC +
Preference number: 2 (lower is better)
Translates to: PGLAPISGMTPAVGIVERCKRQL*ALFSAD
Trigger: GTCGGCGGAGAACAGTGCTCAGAGCTGGCGCTTGCA...CCTCTCCACGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAGCCAGTCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR-3UTR GCA 90 bp CTGGCTCCTGCTGACCCCTGGACTGGCTCCCATCTCGGGAATGACGCCTGCCGTCCTAGGAAGGCTGCGTaGTCTGCAAACCCAGGGGTG +
Preference number: 2 (lower is better)
Translates to: LAPADPWTGSHLGNDACRPRKAA*SANPGV
Trigger: CACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGG...ACGGCAGGCGTCATTCCCGAGATGGGAGCCAGTCCAGGGGTCAGCAGGAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
3UTR CAA 90 bp CCGTACAAGCAGAGGAGAAGCAGGGGTGCCCAGGCTGTCACAGCCTaGCAGTGCATGGTGGGTTCCGTGGCCAACTTGCCAGGGGACAGG +
Preference number: 2 (lower is better)
Translates to: PYKQRRSRGAQAVTA*QCMVGSVANLPGDR
Trigger: CCTGTCCCCTGGCAAGTTGGCCACGGAACCCACCATGCACTGCAAGGCTGTGACAGCCTGGGCACCCCTGCTTCTCCTCTGCTTGTACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR CAA 90 bp AGCAGCCCTTCCAGAGGCCCCAACCCCAGGTGTCTCCGTCCACTCTaGGTCCAGGTTACGTCTGGGCCAGGTGACTGTAACAGCCCAGGC +
Preference number: 2 (lower is better)
Translates to: SSPSRGPNPRCLRPL*VQVTSGPGDCNSPG
Trigger: GCCTGGGCTGTTACAGTCACCTGGCCCAGACGTAACCTGGACCAAGAGTGGACGGAGACACCTGGGGTTGGGGCCTCTGGAAGGGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR GCA 90 bp CCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACCGTGCTGAGAAGGCGCCACCGCCCTaGCCCACGACAGCTGCGTCT +
Preference number: 2 (lower is better)
Translates to: PQTCPGSKTAAFTLHRAEKAPPP*PTTAAS
Trigger: AGACGCAGCTGTCGTGGGGCAGGGCGGTGGCGCCTT...CTCAGCACGGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR-3UTR GCA 90 bp AGGGCCGAGAACAGTGCCCAAAGCGCAGCCACTGTGTTGTGTGTCCTCTGCCATCAGCCAGGGCACGTGTaGCCAGCGCTGGCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: RAENSAQSAATVLCVLCHQPGHV*PALAPA
Trigger: AGCAGGAGCCAGCGCTGGGCACACGTGCCCTGGCTG...ATGGCAGAGGACACACAACACAGTGGCTGCGCTTTGGGCACTGTTCTCGGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR GCA 90 bp CCCCAACCCCAGGTGTCTCCGTCCACTCTTGGTCCAGGTTACGTCTGGGCCAGGGTCACAGCCTTGCAGTaGATGGTGGGTTCCGTGGCC +
Preference number: 2 (lower is better)
Translates to: PQPQVSPSTLGPGYVWARVTALQ*MVGSVA
Trigger: GGCCACGGAACCCACCATGCACTGCAAGGCTGTGAC...CCTGGCCCAGACGTAACCTGGACCAAGAGTGGACGGAGACACCTGGGGTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR CCA 90 bp CCTGGCCTATGCGGGGCAGCTCAGTTTGAAGCAGGAACTTCCCCAAACGTGCCCAACCCAGGGGTGCTGTaGCCGTACAGCAGGGGCGTC +
Preference number: 2 (lower is better)
Translates to: PGLCGAAQFEAGTSPNVPNPGVL*PYSRGV
Trigger: GACGCCCCTGCTGTACGGCCACAGCACCCCTGGGTT...GGGCACGTTTGGGGAAGTTCCTGCTTCAAACTGAGCTGCCCCGCATAGGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
3UTR-3UTR CCA 90 bp TGGGGGCAGTTAGGTCAGCCTCGGGGCAGGATGCTTCAGGGCCGAGAACAGTGCTGGTGTGGGTTGACCTaGCCTATGCGGGGCAGCTCA +
Preference number: 2 (lower is better)
Translates to: WGQLGQPRGRMLQGREQCWCGLT*PMRGSS
Trigger: TGAGCTGCCCCGCATAGGCCAGGTCAACCCACACCA...GCACTGTTCTCGGCCCTGAAGCATCCTGCCCCGAGGCTGACCTAACTGCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR CCA 90 bp CCCTGGACTGGCTCCCATCTCGGGAATGACGCCTGCCGTGGGAATCGTGGAGAGTGGTGTGGGTTGACCTaGCCTATGCGGGGCAGCTCA +
Preference number: 2 (lower is better)
Translates to: PWTGSHLGNDACRGNRGEWCGLT*PMRGSS
Trigger: TGAGCTGCCCCGCATAGGCCAGGTCAACCCACACCA...CTCTCCACGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAGCCAGTCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
3UTR-3UTR CCA 90 bp AGGGCCGAGAACAGTGCCCAAAGCGCAGCCACTGTGTTGTGTGTCCTCTGCCATCACCCAGGATGCCGCTaGCCTCAGCCAGGGCACGTG +
Preference number: 2 (lower is better)
Translates to: RAENSAQSAATVLCVLCHHPGCR*PQPGHV
Trigger: CACGTGCCCTGGCTGAGGCCAGCGGCATCCTGGGTG...ATGGCAGAGGACACACAACACAGTGGCTGCGCTTTGGGCACTGTTCTCGGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CAA 90 bp GAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTaGCACCGTGCTGAGCAGAGCGGGGCCTCGCCAGGTGGAAAGCCC +
Preference number: 2 (lower is better)
Translates to: ELPQTCPGSKTAAFT*HRAEQSGASPGGKP
Trigger: GGGCTTTCCACCTGGCGAGGCCCCGCTCTGCTCAGCACGGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
3UTR-3UTR TCA 90 bp GATTTATTGGGGGAACCGTACAAGCAGAGGAGAAGCAGGGGTGCCCAGGCTGTCCACTTTGCACCGTGCTaGGCAGAGCGGGGCCTCGCC +
Preference number: 2 (lower is better)
Translates to: DLLGEPYKQRRSRGAQAVHFAPC*AERGLA
Trigger: GGCGAGGCCCCGCTCTGCTCAGCACGGTGCAAAGTG...GACAGCCTGGGCACCCCTGCTTCTCCTCTGCTTGTACGGTTCCCCCAATAAATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR-3UTR GCA 90 bp GGACCATCTTTCAGCAAGTACCTTCCTCGGGCATGGCTGCCTCCTGTGGGCGTACTGCCCCACGACAGCTaGGTCTGCAAGCGCCAGCTC +
Preference number: 2 (lower is better)
Translates to: GPSFSKYLPRAWLPPVGVLPHDS*VCKRQL
Trigger: GAGCTGGCGCTTGCAGACGCAGCTGTCGTGGGGCAG...TACGCCCACAGGAGGCAGCCATGCCCGAGGAAGGTACTTGCTGAAAGATGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR GCA 90 bp CGTCCATTGGAGAATCTCAGCCCAGCAACGCGAGCTGCCGTCTGTCTTCTAAGGAAGGCGCCACCGCCCTaGCCCACGACAGCTGCGTCT +
Preference number: 2 (lower is better)
Translates to: RPLENLSPATRAAVCLLRKAPPP*PTTAAS
Trigger: AGACGCAGCTGTCGTGGGGCAGGGCGGTGGCGCCTT...CCTTAGAAGACAGACGGCAGCTCGCGTTGCTGGGCTGAGATTCTCCAATGGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR GCA 90 bp CCGGTGGGGTCATCTTGCCTCTCCGGACTGCTCCCTCTGACTGGTGAAGCCACACTCGGGAATGACGCCTaGCGTGGGAATCGTGGAGAG +
Preference number: 2 (lower is better)
Translates to: PVGSSCLSGLLPLTGEATLGNDA*RGNRGE
Trigger: CTCTCCACGATTCCCACGGCAGGCGTCATTCCCGAG...TGTGGCTTCACCAGTCAGAGGGAGCAGTCCGGAGAGGCAAGATGACCCCACCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR-3UTR GCA 90 bp AAGCCACACTCTGTGAAGCTGTCTGACAGAAGGGGACACGCCTTTGCTGCCCAGCAGCCAGGGCACGTGTaGCCAGCGCTGGCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: KPHSVKLSDRRGHAFAAQQPGHV*PALAPA
Trigger: AGCAGGAGCCAGCGCTGGGCACACGTGCCCTGGCTG...CTGGGCAGCAAAGGCGTGTCCCCTTCTGTCAGACAGCTTCACAGAGTGTGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR-3UTR CCA 90 bp AGCACAGAAAGGAAAGTGTGGAGTGCGGAGCGAGGCCTCTGGTTTGGCCAGCTCAACCCAGGGGTGCTGTaGCCGTACAGCAGGGGCGTC +
Preference number: 2 (lower is better)
Translates to: STERKVWSAERGLWFGQLNPGVL*PYSRGV
Trigger: GACGCCCCTGCTGTACGGCCACAGCACCCCTGGGTT...GAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTTTCTGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
3UTR-3UTR CCA 90 bp TCCCCCTGGGCACTGGCATGGAGATGTGACGGAGTGTGGTTTCACGGCGGCCAACTTTGCTGCCCAGGATaGACCTGGGCCACCCAGGAT +
Preference number: 2 (lower is better)
Translates to: SPWALAWRCDGVWFHGGQLCCPG*TWATQD
Trigger: ATCCTGGGTGGCCCAGGTCCATCCTGGGCAGCAAAG...TTGGCCGCCGTGAAACCACACTCCGTCACATCTCCATGCCAGTGCCCAGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR CCA 90 bp AGTGGCTGTCAGGCCCTTGTCATGGCTGAGTGGCCACCAGGGTGCGGGTTGGTGGCCATAGGCAAAGGATaGACGGGTGGGCAAGTCTGC +
Preference number: 2 (lower is better)
Translates to: SGCQALVMAEWPPGCGLVAIGKG*TGGQVC
Trigger: GCAGACTTGCCCACCCGTCCATCCTTTGCCTATGGC...CACCAACCCGCACCCTGGTGGCCACTCAGCCATGACAAGGGCCTGACAGCCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR GCA 90 bp GCACAGAAAGGAAAGTGTGGAGTGCGGAGCGAGGCCTCTGGTTTGGCCAGCTCCGAAGGCTGCGTGCTCTaGAAACCCAGGGGTGCTGTG +
Preference number: 2 (lower is better)
Translates to: AQKGKCGVRSEASGLASSEGCVL*KPRGAV
Trigger: CACAGCACCCCTGGGTTTGCAGAGCACGCAGCCTTC...GGAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTTTCTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
3UTR-3UTR GCA 90 bp CTGACCCCTGGACTGGCTCCCATCTCGGGAATGACGCCTGCCGTGGGAATCGTGCAGCAGCATTCACTTTaGACCGTGCTGAGCAGAGCG +
Preference number: 2 (lower is better)
Translates to: LTPGLAPISGMTPAVGIVQQHSL*TVLSRA
Trigger: CGCTCTGCTCAGCACGGTGCAAAGTGAATGCTGCTG...CACGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAGCCAGTCCAGGGGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
3UTR-3UTR GCA 90 bp AGTGGCTGTCAGGCCCTTGTCATGGCTGAGTGGCCACCAGGGTGCGGGTTGGTGAAGGAAAGTGTGGAGTaGGGAGCGAGGCCTCTGGTT +
Preference number: 2 (lower is better)
Translates to: SGCQALVMAEWPPGCGLVKESVE*GARPLV
Trigger: AACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTT...CACCAACCCGCACCCTGGTGGCCACTCAGCCATGACAAGGGCCTGACAGCCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR CCA 90 bp TGTGGAGTGCGGAGCGAGGCCTCTGGTTTGGCCAGCTCCGGTTGCTGGGGATGGCCAAACCTAGGTGGATaGGAAGTGCCTGTGTGGATG +
Preference number: 2 (lower is better)
Translates to: CGVRSEASGLASSGCWGWPNLGG*EVPVWM
Trigger: CATCCACACAGGCACTTCCCATCCACCTAGGTTTGG...CCATCCCCAGCAACCGGAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR-3UTR CCA 90 bp CACTCTGTGAAGCTGTCTGACAGAAGGGGACACGCCTTTGCTGCCCAGGATGGAACGTGTGCCCAGCGCTaGCTCCTGCTGACCCCTGGA +
Preference number: 2 (lower is better)
Translates to: HSVKLSDRRGHAFAAQDGTCAQR*LLLTPG
Trigger: TCCAGGGGTCAGCAGGAGCCAGCGCTGGGCACACGT...TCCATCCTGGGCAGCAAAGGCGTGTCCCCTTCTGTCAGACAGCTTCACAGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR-3UTR CCA 90 bp CCCCAACCCCAGGTGTCTCCGTCCACTCTTGGTCCAGGTTACGTCTGGGCCAGGAGATGTGACGGAGTGTaGTTTCACGGCGGCCAACTG +
Preference number: 2 (lower is better)
Translates to: PQPQVSPSTLGPGYVWARRCDGV*FHGGQL
Trigger: CAGTTGGCCGCCGTGAAACCACACTCCGTCACATCT...CCTGGCCCAGACGTAACCTGGACCAAGAGTGGACGGAGACACCTGGGGTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CAA 90 bp AGGATGGACGGGTGGGCAAGTCTGCCCTTGGCCCAGGGGTGCCACTaGCCCAGGCTTATGCAGATGAGTCTAGGCGTAACGCAGGCTAAT +
Preference number: 2 (lower is better)
Translates to: RMDGWASLPLAQGCH*PRLMQMSLGVTQAN
Trigger: ATTAGCCTGCGTTACGCCTAGACTCATCTGCATAAGCCTGGGCAAGTGGCACCCCTGGGCCAAGGGCAGACTTGCCCACCCGTCCATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CAA 90 bp GTCCTCTGCCATAGGCAAAGGATGGACGGGTGGGCAAGTCTGCCCTaGGCCCAGGGGTGCCACTTGCCCAGGCTTATGCAGATGAGTCTA +
Preference number: 2 (lower is better)
Translates to: VLCHRQRMDGWASLP*AQGCHLPRLMQMSL
Trigger: TAGACTCATCTGCATAAGCCTGGGCAAGTGGCACCCCTGGGCCAAGGGCAGACTTGCCCACCCGTCCATCCTTTGCCTATGGCAGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CAA 90 bp CCTCCTGTGGGCGTACACATTTGGACCACACAGTGGGAGTCGGGATaGGAGTACTGGGTCTGTAGCCTTGGCCATGAGTCCAGCTGGGGG +
Preference number: 2 (lower is better)
Translates to: PPVGVHIWTTQWESG*EYWVCSLGHESSWG
Trigger: CCCCCAGCTGGACTCATGGCCAAGGCTACAGACCCAGTACTCCAATCCCGACTCCCACTGTGTGGTCCAAATGTGTACGCCCACAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CAA 90 bp GGGCACGGACACACACCATGTGGTGCAAATGTCATACAGCAGGGTTaGTGGGCGAAGCACCAGCAGAGGCAGGGCTGGAAGCAGGAGCTG +
Preference number: 2 (lower is better)
Translates to: GHGHTPCGANVIQQG*WAKHQQRQGWKQEL
Trigger: CAGCTCCTGCTTCCAGCCCTGCCTCTGCTGGTGCTTCGCCCACAAACCCTGCTGTATGACATTTGCACCACATGGTGTGTGTCCGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR TCA 90 bp TGCGGACAGGTCCTTGTTAGTAAGGAGGAGGCTCTGCAGTCCCGGTGGGGTCATGAGATTGGTGTGGGTTaGCCTGGCCTATGCGGGGCA +
Preference number: 2 (lower is better)
Translates to: CGQVLVSKEEALQSRWGHEIGVG*PGLCGA
Trigger: TGCCCCGCATAGGCCAGGTCAACCCACACCAATCTC...ATGACCCCACCGGGACTGCAGAGCCTCCTCCTTACTAACAAGGACCTGTCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR-3UTR TCA 90 bp CACTCTGTGAAGCTGTCTGACAGAAGGGGACACGCCTTTGCTGCCCAGGATGGACTCCCATCTCGGGAATaGCGCCTGCCGTGGGAATCG +
Preference number: 2 (lower is better)
Translates to: HSVKLSDRRGHAFAAQDGLPSRE*RLPWES
Trigger: CGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAG...TCCATCCTGGGCAGCAAAGGCGTGTCCCCTTCTGTCAGACAGCTTCACAGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR-3UTR TCA 90 bp TGCCCAGGCTGTCACAGCCTTGCAGTGCATGGTGGGTTCCGTGGCCAACTTGCCCTCTGTGAAGCTGTCTaGCAGAAGGGGACACGCCTT +
Preference number: 2 (lower is better)
Translates to: CPGCHSLAVHGGFRGQLALCEAV*QKGTRL
Trigger: AAGGCGTGTCCCCTTCTGTCAGACAGCTTCACAGAG...GGCAAGTTGGCCACGGAACCCACCATGCACTGCAAGGCTGTGACAGCCTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR-3UTR GCA 90 bp TTAGTAAGGAGGAGGCTCTGCAGTCCCGGTGGGGTCATCTTGCCTCTCCGGACTCCTAGGAAGGCTGCGTaGTCTGCAAACCCAGGGGTG +
Preference number: 2 (lower is better)
Translates to: LVRRRLCSPGGVILPLRTPRKAA*SANPGV
Trigger: CACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGG...AGTCCGGAGAGGCAAGATGACCCCACCGGGACTGCAGAGCCTCCTCCTTACTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR-3UTR GCA 90 bp GGACCATCTTTCAGCAAGTACCTTCCTCGGGCATGGCTGCCTCCTGTGGGCGTAAGCCTCGGGGCAGGATaGTTCAGGGCCGAGAACAGT +
Preference number: 2 (lower is better)
Translates to: GPSFSKYLPRAWLPPVGVSLGAG*FRAENS
Trigger: ACTGTTCTCGGCCCTGAAGCATCCTGCCCCGAGGCT...TACGCCCACAGGAGGCAGCCATGCCCGAGGAAGGTACTTGCTGAAAGATGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR CCA 90 bp AAGCCACACTCTGTGAAGCTGTCTGACAGAAGGGGACACGCCTTTGCTGCCCAGGATGTGAAGCCACCTTaGGTGGGCGGCTCGGAGCTC +
Preference number: 2 (lower is better)
Translates to: KPHSVKLSDRRGHAFAAQDVKPP*VGGSEL
Trigger: GAGCTCCGAGCCGCCCACCCAAGGTGGCTTCACATC...CTGGGCAGCAAAGGCGTGTCCCCTTCTGTCAGACAGCTTCACAGAGTGTGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR-3UTR CCA 90 bp GTCCAGAAGAGATTGGTGTGGGTTGACCTGGCCTATGCGGGGCAGCTCAGTTTGGATGTGAAGCCACCTTaGGTGGGCGGCTCGGAGCTC +
Preference number: 2 (lower is better)
Translates to: VQKRLVWVDLAYAGQLSLDVKPP*VGGSEL
Trigger: GAGCTCCGAGCCGCCCACCCAAGGTGGCTTCACATC...CAAACTGAGCTGCCCCGCATAGGCCAGGTCAACCCACACCAATCTCTTCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR-3UTR CCA 90 bp AGTGGCTGTCAGGCCCTTGTCATGGCTGAGTGGCCACCAGGGTGCGGGTTGGTGTCGGGATTGGAGTACTaGGTCTGTAGCCTTGGCCAT +
Preference number: 2 (lower is better)
Translates to: SGCQALVMAEWPPGCGLVSGLEY*VCSLGH
Trigger: ATGGCCAAGGCTACAGACCCAGTACTCCAATCCCGA...CACCAACCCGCACCCTGGTGGCCACTCAGCCATGACAAGGGCCTGACAGCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CAA 90 bp AATTACAGGGTGGGAGTGAAGGACCTCGCGGCTGCGGACAGGTCCTaGTTAGTAAGGAGGAGGCTCTGCAGTCCCGGTGGGGTCATCTTG +
Preference number: 2 (lower is better)
Translates to: NYRVGVKDLAAADRS*LVRRRLCSPGGVIL
Trigger: CAAGATGACCCCACCGGGACTGCAGAGCCTCCTCCTTACTAACAAGGACCTGTCCGCAGCCGCGAGGTCCTTCACTCCCACCCTGTAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR CAA 90 bp GGATGCTTCAGGGCCGAGAACAGTGCCCAAAGCGCAGCCACTGTGTaGTGTGTCCTCTGCCATAGGCAAAGGATGGACGGGTGGGCAAGT +
Preference number: 2 (lower is better)
Translates to: GCFRAENSAQSAATV*CVLCHRQRMDGWAS
Trigger: ACTTGCCCACCCGTCCATCCTTTGCCTATGGCAGAGGACACACAACACAGTGGCTGCGCTTTGGGCACTGTTCTCGGCCCTGAAGCATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CAA 90 bp GGCTGTCAGGCCCTTGTCATGGCTGAGTGGCCACCAGGGTGCGGGTaGGTGGCCATGAAGCCACCCAAGGCAACAGCATCATCTAAATTC +
Preference number: 2 (lower is better)
Translates to: GCQALVMAEWPPGCG*VAMKPPKATASSKF
Trigger: GAATTTAGATGATGCTGTTGCCTTGGGTGGCTTCATGGCCACCAACCCGCACCCTGGTGGCCACTCAGCCATGACAAGGGCCTGACAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR TCA 90 bp CTGTCCAGAAGAGATTGGTGTGGGTTGACCTGGCCTATGCGGGGCAGCTCAGTTTCCTGGGAGACCTCCTaGGGAGACGCGAAGACCATC +
Preference number: 2 (lower is better)
Translates to: LSRRDWCGLTWPMRGSSVSWETS*GDAKTI
Trigger: GATGGTCTTCGCGTCTCCTCAGGAGGTCTCCCAGGA...AACTGAGCTGCCCCGCATAGGCCAGGTCAACCCACACCAATCTCTTCTGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR-3UTR GCA 90 bp ACCCAGCACCTGTCCAGAAGAGATTGGTGTGGGTTGACCTGGCCTATGCGGGGCCAGCAGCATTCACTTTaGACCGTGCTGAGCAGAGCG +
Preference number: 2 (lower is better)
Translates to: TQHLSRRDWCGLTWPMRGQQHSL*TVLSRA
Trigger: CGCTCTGCTCAGCACGGTGCAAAGTGAATGCTGCTG...GCCCCGCATAGGCCAGGTCAACCCACACCAATCTCTTCTGGACAGGTGCTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
3UTR-3UTR CCA 90 bp CACTCTGTGAAGCTGTCTGACAGAAGGGGACACGCCTTTGCTGCCCAGGATGGATGGTGTGGGTTGACCTaGCCTATGCGGGGCAGCTCA +
Preference number: 2 (lower is better)
Translates to: HSVKLSDRRGHAFAAQDGWCGLT*PMRGSS
Trigger: TGAGCTGCCCCGCATAGGCCAGGTCAACCCACACCA...TCCATCCTGGGCAGCAAAGGCGTGTCCCCTTCTGTCAGACAGCTTCACAGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR-3UTR CCA 90 bp ATGTGGTGCAAATGTCATACAGCAGGGTTTGTGGGCGAAGCACCAGCAGAGGCATGCCCAGGATGGACCTaGGCCACCCAGGATGCCGCT +
Preference number: 2 (lower is better)
Translates to: MWCKCHTAGFVGEAPAEACPGWT*ATQDAA
Trigger: AGCGGCATCCTGGGTGGCCCAGGTCCATCCTGGGCA...TGCCTCTGCTGGTGCTTCGCCCACAAACCCTGCTGTATGACATTTGCACCACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR CCA 90 bp TCTGATTCGCCTCATACCCGCTTAGGGGTGCCCAGAGCAGGGCATGGCATCATGGCCATAGGCAAAGGATaGACGGGTGGGCAAGTCTGC +
Preference number: 2 (lower is better)
Translates to: SDSPHTRLGVPRAGHGIMAIGKG*TGGQVC
Trigger: GCAGACTTGCCCACCCGTCCATCCTTTGCCTATGGC...CATGATGCCATGCCCTGCTCTGGGCACCCCTAAGCGGGTATGAGGCGAATCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR CCA 90 bp AGTGGCTGTCAGGCCCTTGTCATGGCTGAGTGGCCACCAGGGTGCGGGTTGGTGGGTGGCGGCATGAACTaGACCATCTTTCAGCAAGTA +
Preference number: 2 (lower is better)
Translates to: SGCQALVMAEWPPGCGLVGGGMN*TIFQQV
Trigger: TACTTGCTGAAAGATGGTCCAGTTCATGCCGCCACC...CACCAACCCGCACCCTGGTGGCCACTCAGCCATGACAAGGGCCTGACAGCCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR TCA 90 bp GAAGCAGGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGTGCCTGTGTGGATGTaGAGCCACCTTGGGTGGGCG +
Preference number: 2 (lower is better)
Translates to: EAGTSPNVPRLQDSSIHFVPVWM*SHLGWA
Trigger: CGCCCACCCAAGGTGGCTTCACATCCACACAGGCAC...AAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCCTGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR-3UTR TCA 90 bp TCGGGGCAGGATGCTTCAGGGCCGAGAACAGTGCCCAAAGCGCAGCCACTGTGTTGTTCTCCGCCGACATaGGGACACCATCCAAGAATT +
Preference number: 2 (lower is better)
Translates to: SGQDASGPRTVPKAQPLCCSPPT*GHHPRI
Trigger: AATTCTTGGATGGTGTCCTCATGTCGGCGGAGAACA...ACACAGTGGCTGCGCTTTGGGCACTGTTCTCGGCCCTGAAGCATCCTGCCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR TCA 90 bp AGCACAGAAAGGAAAGTGTGGAGTGCGGAGCGAGGCCTCTGGTTTGGCCAGCTCCGGGGCAGCTCAGTTTaGAGCAGGAACTTCCCCAAA +
Preference number: 2 (lower is better)
Translates to: STERKVWSAERGLWFGQLRGSSV*SRNFPK
Trigger: TTTGGGGAAGTTCCTGCTTCAAACTGAGCTGCCCCG...GAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTTTCTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
3UTR-3UTR GCA 90 bp ATGTGGTGCAAATGTCATACAGCAGGGTTTGTGGGCGAAGCACCAGCAGAGGCACTGCAAACCCAGGGGTaGTGTGGCCGTACAGCAGGG +
Preference number: 2 (lower is better)
Translates to: MWCKCHTAGFVGEAPAEALQTQG*CGRTAG
Trigger: CCCTGCTGTACGGCCACAGCACCCCTGGGTTTGCAG...TGCCTCTGCTGGTGCTTCGCCCACAAACCCTGCTGTATGACATTTGCACCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR GCA 90 bp CAGGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACCCTAGGAAGGCTGCGTaGTCTGCAAACCCAGGGGTG +
Preference number: 2 (lower is better)
Translates to: QELPQTCPGSKTAAFTLHPRKAA*SANPGV
Trigger: CACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGG...GTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
3UTR-3UTR GCA 90 bp AATTCACGTCCATTGGAGAATCTCAGCCCAGCAACGCGAGCTGCCGTCTGTCTTTTGGCCAGCTCCGGTTaGTGGGGATGGCCACACCCT +
Preference number: 2 (lower is better)
Translates to: NSRPLENLSPATRAAVCLLASSG*WGWPHP
Trigger: AGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAA...AAGACAGACGGCAGCTCGCGTTGCTGGGCTGAGATTCTCCAATGGACGTGAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR GCA 90 bp AAAGGGCACGGACACACACCATGTGGTGCAAATGTCATACAGCAGGGTTTGTGGGGGACACGCCTTTGCTaGCCAGGATGGACCTGGGCC +
Preference number: 2 (lower is better)
Translates to: KGHGHTPCGANVIQQGLWGTRLC*PGWTWA
Trigger: GGCCCAGGTCCATCCTGGGCAGCAAAGGCGTGTCCC...CCACAAACCCTGCTGTATGACATTTGCACCACATGGTGTGTGTCCGTGCCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR CCA 90 bp ATGTGGTGCAAATGTCATACAGCAGGGTTTGTGGGCGAAGCACCAGCAGAGGCAGGAAGATGCTGGCCGTaGAGGCCCCATCACAGAGGC +
Preference number: 2 (lower is better)
Translates to: MWCKCHTAGFVGEAPAEAGRCWP*RPHHRG
Trigger: GCCTCTGTGATGGGGCCTCCACGGCCAGCATCTTCC...TGCCTCTGCTGGTGCTTCGCCCACAAACCCTGCTGTATGACATTTGCACCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CAA 90 bp CTGGCATGGAGATGTGACGGAGTGTGGTTTCACGGCGGCCAACTGTaGCTGCAAGAGGGATGTGAACAAGTACCAGCTCCACACGGTGAG +
Preference number: 2 (lower is better)
Translates to: LAWRCDGVWFHGGQL*LQEGCEQVPAPHGE
Trigger: CTCACCGTGTGGAGCTGGTACTTGTTCACATCCCTCTTGCAGCAACAGTTGGCCGCCGTGAAACCACACTCCGTCACATCTCCATGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR TCA 90 bp GGGAGACCTCCTGAGGAGACGCGAAGACCATCGATGCTTTGGAAGAATGAAAAGGTGCCTGTGTGGATGTaGAGCCACCTTGGGTGGGCG +
Preference number: 2 (lower is better)
Translates to: GRPPEETRRPSMLWKNEKVPVWM*SHLGWA
Trigger: CGCCCACCCAAGGTGGCTTCACATCCACACAGGCAC...CTTTTCATTCTTCCAAAGCATCGATGGTCTTCGCGTCTCCTCAGGAGGTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR-3UTR TCA 90 bp AGGCTTATGCAGATGAGTCTAGGCGTAACGCAGGCTAATGGCGAGAACAGAGCAGTGCCTGTGTGGATGTaGAGCCACCTTGGGTGGGCG +
Preference number: 2 (lower is better)
Translates to: RLMQMSLGVTQANGENRAVPVWM*SHLGWA
Trigger: CGCCCACCCAAGGTGGCTTCACATCCACACAGGCAC...TGCTCTGTTCTCGCCATTAGCCTGCGTTACGCCTAGACTCATCTGCATAAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR TCA 90 bp GAAGCAGGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTTCCTGGGAGACCTCCTaGGGAGACGCGAAGACCATC +
Preference number: 2 (lower is better)
Translates to: EAGTSPNVPRLQDSSIHFSWETS*GDAKTI
Trigger: GATGGTCTTCGCGTCTCCTCAGGAGGTCTCCCAGGA...AAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCCTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR-3UTR TCA 90 bp ACCCAGCACCTGTCCAGAAGAGATTGGTGTGGGTTGACCTGGCCTATGCGGGGCTGTTCTCCGCCGACATaGGGACACCATCCAAGAATT +
Preference number: 2 (lower is better)
Translates to: TQHLSRRDWCGLTWPMRGCSPPT*GHHPRI
Trigger: AATTCTTGGATGGTGTCCTCATGTCGGCGGAGAACA...GCCCCGCATAGGCCAGGTCAACCCACACCAATCTCTTCTGGACAGGTGCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR-3UTR GCA 90 bp GAAGCAGGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGAAGGCTGCGTGCTCTaGAAACCCAGGGGTGCTGTG +
Preference number: 2 (lower is better)
Translates to: EAGTSPNVPRLQDSSIHFEGCVL*KPRGAV
Trigger: CACAGCACCCCTGGGTTTGCAGAGCACGCAGCCTTC...AAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCCTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
3UTR-3UTR GCA 90 bp AATTCACGTCCATTGGAGAATCTCAGCCCAGCAACGCGAGCTGCCGTCTGTCTTGTAAGGAGGAGGCTCTaGAGTCCCGGTGGGGTCATC +
Preference number: 2 (lower is better)
Translates to: NSRPLENLSPATRAAVCLVRRRL*SPGGVI
Trigger: GATGACCCCACCGGGACTGCAGAGCCTCCTCCTTAC...AAGACAGACGGCAGCTCGCGTTGCTGGGCTGAGATTCTCCAATGGACGTGAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR GCA 90 bp AATTCACGTCCATTGGAGAATCTCAGCCCAGCAACGCGAGCTGCCGTCTGTCTTGTTCCGTGGCCAACTTaGCAGGGGACAGGCCTGTTG +
Preference number: 2 (lower is better)
Translates to: NSRPLENLSPATRAAVCLVPWPT*QGTGLL
Trigger: CAACAGGCCTGTCCCCTGGCAAGTTGGCCACGGAAC...AAGACAGACGGCAGCTCGCGTTGCTGGGCTGAGATTCTCCAATGGACGTGAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR GCA 90 bp AATTCACGTCCATTGGAGAATCTCAGCCCAGCAACGCGAGCTGCCGTCTGTCTTCAGGGCCGAGAACAGTaGCCAAAGCGCAGCCACTGT +
Preference number: 2 (lower is better)
Translates to: NSRPLENLSPATRAAVCLQGREQ*PKRSHC
Trigger: ACAGTGGCTGCGCTTTGGGCACTGTTCTCGGCCCTG...AAGACAGACGGCAGCTCGCGTTGCTGGGCTGAGATTCTCCAATGGACGTGAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR CCA 90 bp CCTGTCCAGAAGAGATTGGTGTGGGTTGACCTGGCCTATGCGGGGCAGCTCAGTCCAAACCTAGGTGGATaGGAAGTGCCTGTGTGGATG +
Preference number: 2 (lower is better)
Translates to: PVQKRLVWVDLAYAGQLSPNLGG*EVPVWM
Trigger: CATCCACACAGGCACTTCCCATCCACCTAGGTTTGG...ACTGAGCTGCCCCGCATAGGCCAGGTCAACCCACACCAATCTCTTCTGGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR-3UTR CCA 90 bp GGATTTATTGGGGGAACCGTACAAGCAGAGGAGAAGCAGGGGTGCCCAGGCTGTACAGAAAGGAAAGTGTaGAGTGCGGAGCGAGGCCTC +
Preference number: 2 (lower is better)
Translates to: GFIGGTVQAEEKQGCPGCTERKV*SAERGL
Trigger: GAGGCCTCGCTCCGCACTCCACACTTTCCTTTCTGT...ACAGCCTGGGCACCCCTGCTTCTCCTCTGCTTGTACGGTTCCCCCAATAAATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR-3UTR CCA 90 bp AAAGGGCACGGACACACACCATGTGGTGCAAATGTCATACAGCAGGGTTTGTGGATGGCGGGAAGATGCTaGCCGTGGAGGCCCCATCAC +
Preference number: 2 (lower is better)
Translates to: KGHGHTPCGANVIQQGLWMAGRC*PWRPHH
Trigger: GTGATGGGGCCTCCACGGCCAGCATCTTCCCGCCAT...CCACAAACCCTGCTGTATGACATTTGCACCACATGGTGTGTGTCCGTGCCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR GCA 90 bp TGGGGGCAGTTAGGTCAGCCTCGGGGCAGGATGCTTCAGGGCCGAGAACAGTGCCGCGAAGACCATCGATaGTTTGGAAGAATGAAAAGA +
Preference number: 2 (lower is better)
Translates to: WGQLGQPRGRMLQGREQCREDHR*FGRMKR
Trigger: TCTTTTCATTCTTCCAAAGCATCGATGGTCTTCGCG...GCACTGTTCTCGGCCCTGAAGCATCCTGCCCCGAGGCTGACCTAACTGCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR CCA 90 bp GGATTTATTGGGGGAACCGTACAAGCAGAGGAGAAGCAGGGGTGCCCAGGCTGTCCAAACCTAGGTGGATaGGAAGTGCCTGTGTGGATG +
Preference number: 2 (lower is better)
Translates to: GFIGGTVQAEEKQGCPGCPNLGG*EVPVWM
Trigger: CATCCACACAGGCACTTCCCATCCACCTAGGTTTGG...ACAGCCTGGGCACCCCTGCTTCTCCTCTGCTTGTACGGTTCCCCCAATAAATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR-3UTR CCA 90 bp CAACAGCATCATCTAAATTCACGTCCATTGGAGAATCTCAGCCCAGCAACGCGAACGTGTGCCCAGCGCTaGCTCCTGCTGACCCCTGGA +
Preference number: 2 (lower is better)
Translates to: QQHHLNSRPLENLSPATRTCAQR*LLLTPG
Trigger: TCCAGGGGTCAGCAGGAGCCAGCGCTGGGCACACGT...TCGCGTTGCTGGGCTGAGATTCTCCAATGGACGTGAATTTAGATGATGCTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR CCA 90 bp AGGCTTATGCAGATGAGTCTAGGCGTAACGCAGGCTAATGGCGAGAACAGAGCAGCATGGTGGGTTCCGTaGCCAACTTGCCAGGGGACA +
Preference number: 2 (lower is better)
Translates to: RLMQMSLGVTQANGENRAAWWVP*PTCQGT
Trigger: TGTCCCCTGGCAAGTTGGCCACGGAACCCACCATGC...TGCTCTGTTCTCGCCATTAGCCTGCGTTACGCCTAGACTCATCTGCATAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR CCA 90 bp CCCCAACCCCAGGTGTCTCCGTCCACTCTTGGTCCAGGTTACGTCTGGGCCAGGCTCCACACGGTGAGATaGAAAATAGGATTTATTGGG +
Preference number: 2 (lower is better)
Translates to: PQPQVSPSTLGPGYVWARLHTVR*KIGFIG
Trigger: CCCAATAAATCCTATTTTCCATCTCACCGTGTGGAG...CCTGGCCCAGACGTAACCTGGACCAAGAGTGGACGGAGACACCTGGGGTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR CCA 90 bp AATTCACGTCCATTGGAGAATCTCAGCCCAGCAACGCGAGCTGCCGTCTGTCTTCAGAGGTCCAGCTGGTaGCGGCATGAACTGGACCAT +
Preference number: 2 (lower is better)
Translates to: NSRPLENLSPATRAAVCLQRSSW*RHELDH
Trigger: ATGGTCCAGTTCATGCCGCCACCAGCTGGACCTCTG...AAGACAGACGGCAGCTCGCGTTGCTGGGCTGAGATTCTCCAATGGACGTGAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR GCA 90 bp TGCCCAGGCTGTCACAGCCTTGCAGTGCATGGTGGGTTCCGTGGCCAACTTGCCCGCGAAGACCATCGATaGTTTGGAAGAATGAAAAGA +
Preference number: 2 (lower is better)
Translates to: CPGCHSLAVHGGFRGQLAREDHR*FGRMKR
Trigger: TCTTTTCATTCTTCCAAAGCATCGATGGTCTTCGCG...GGCAAGTTGGCCACGGAACCCACCATGCACTGCAAGGCTGTGACAGCCTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR-3UTR CCA 90 bp CCAGTCCCGGTCAATGACGCAAATATCCAAAAGGGAAGAGAAGCCGATATTCTTGCGGAGCGAGGCCTCTaGTTTGGCCAGCTCCGGTTG +
Preference number: 2 (lower is better)
Translates to: PVPVNDANIQKGREADILAERGL*FGQLRL
Trigger: CAACCGGAGCTGGCCAAACCAGAGGCCTCGCTCCGC...AAGAATATCGGCTTCTCTTCCCTTTTGGATATTTGCGTCATTGACCGGGACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR CCA 90 bp AGGCTTATGCAGATGAGTCTAGGCGTAACGCAGGCTAATGGCGAGAACAGAGCACCTTGCAGTGCATGGTaGGTTCCGTGGCCAACTTGC +
Preference number: 2 (lower is better)
Translates to: RLMQMSLGVTQANGENRAPCSAW*VPWPTC
Trigger: GCAAGTTGGCCACGGAACCCACCATGCACTGCAAGG...TGCTCTGTTCTCGCCATTAGCCTGCGTTACGCCTAGACTCATCTGCATAAGCCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR TCA 90 bp AGGCTTATGCAGATGAGTCTAGGCGTAACGCAGGCTAATGGCGAGAACAGAGCAACTGGCATGGAGATGTaGCGGAGTGTGGTTTCACGG +
Preference number: 2 (lower is better)
Translates to: RLMQMSLGVTQANGENRATGMEM*RSVVSR
Trigger: CCGTGAAACCACACTCCGTCACATCTCCATGCCAGT...TGCTCTGTTCTCGCCATTAGCCTGCGTTACGCCTAGACTCATCTGCATAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR CCA 90 bp ATGTGGTGCAAATGTCATACAGCAGGGTTTGTGGGCGAAGCACCAGCAGAGGCACAGAAGAGATTGGTGTaGGTTGACCTGGCCTATGCG +
Preference number: 2 (lower is better)
Translates to: MWCKCHTAGFVGEAPAEAQKRLV*VDLAYA
Trigger: CGCATAGGCCAGGTCAACCCACACCAATCTCTTCTG...TGCCTCTGCTGGTGCTTCGCCCACAAACCCTGCTGTATGACATTTGCACCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR GCA 90 bp GCGTCCGTGTCCAGGCAGCTTTGTCATGTCTTCCAAAGGTCAGGAAGGCGCCACCGCGAAGACCATCGATaGTTTGGAAGAATGAAAAGA +
Preference number: 2 (lower is better)
Translates to: ASVSRQLCHVFQRSGRRHREDHR*FGRMKR
Trigger: TCTTTTCATTCTTCCAAAGCATCGATGGTCTTCGCG...GTGGCGCCTTCCTGACCTTTGGAAGACATGACAAAGCTGCCTGGACACGGACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR-3UTR GCA 90 bp AATTCACGTCCATTGGAGAATCTCAGCCCAGCAACGCGAGCTGCCGTCTGTCTTGTGTTGTGTGTCCTCTaGCATAGGCAAAGGATGGAC +
Preference number: 2 (lower is better)
Translates to: NSRPLENLSPATRAAVCLVLCVL*HRQRMD
Trigger: GTCCATCCTTTGCCTATGGCAGAGGACACACAACAC...AAGACAGACGGCAGCTCGCGTTGCTGGGCTGAGATTCTCCAATGGACGTGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR CCA 90 bp TGGGGGCAGTTAGGTCAGCCTCGGGGCAGGATGCTTCAGGGCCGAGAACAGTGCAGACCATCGATGCTTTaGAAGAATGAAAAGAAGTTT +
Preference number: 2 (lower is better)
Translates to: WGQLGQPRGRMLQGREQCRPSML*KNEKKF
Trigger: AAACTTCTTTTCATTCTTCCAAAGCATCGATGGTCT...GCACTGTTCTCGGCCCTGAAGCATCCTGCCCCGAGGCTGACCTAACTGCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR TCA 90 bp AAAGGGCACGGACACACACCATGTGGTGCAAATGTCATACAGCAGGGTTTGTGGTGTTCTCCGCCGACATaGGGACACCATCCAAGAATT +
Preference number: 2 (lower is better)
Translates to: KGHGHTPCGANVIQQGLWCSPPT*GHHPRI
Trigger: AATTCTTGGATGGTGTCCTCATGTCGGCGGAGAACA...CCACAAACCCTGCTGTATGACATTTGCACCACATGGTGTGTGTCCGTGCCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CAA 90 bp GTTTCTGATGCCTTGGGGATTTATTTTAAATTTCATGAGATGTTGTaGGCACTGTCATGTCAAAGGGCACGGACACACACCATGTGGTGC +
Preference number: 2 (lower is better)
Translates to: VSDALGIYFKFHEML*ALSCQRARTHTMWC
Trigger: GCACCACATGGTGTGTGTCCGTGCCCTTTGACATGACAGTGCCAACAACATCTCATGAAATTTAAAATAAATCCCCAAGGCATCAGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253928.14
3UTR CAA 90 bp TACGTTTCTGATGCCTTGGGGATTTATTTTAAATTTCATGAGATGTaGTTGGCACTGTCATGTCAAAGGGCACGGACACACACCATGTGG +
Preference number: 2 (lower is better)
Translates to: YVSDALGIYFKFHEM*LALSCQRARTHTMW
Trigger: CCACATGGTGTGTGTCCGTGCCCTTTGACATGACAGTGCCAACAACATCTCATGAAATTTAAAATAAATCCCCAAGGCATCAGAAACGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253928.14
3UTR GCA 72 bp CACCCAGGATGCCGCTGGCCTCAGCCAGGGCACGTGTaGCCAGCGCTGGCTCCTGCTGACCCCTGGACTGGC +
Preference number: 3 (lower is better)
Translates to: HPGCRWPQPGHV*PALAPADPWTG
Trigger: GCCAGTCCAGGGGTCAGCAGGAGCCAGCGCTGGGCACACGTGCCCTGGCTGAGGCCAGCGGCATCCTGGGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR CCA 72 bp GGGCACGTGTGCCCAGCGCTGGCTCCTGCTGACCCCTaGACTGGCTCCCATCTCGGGAATGACGCCTGCCGT +
Preference number: 3 (lower is better)
Translates to: GHVCPALAPADP*TGSHLGNDACR
Trigger: ACGGCAGGCGTCATTCCCGAGATGGGAGCCAGTCCAGGGGTCAGCAGGAGCCAGCGCTGGGCACACGTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
3UTR CCA 72 bp CAGAAGGGGACACGCCTTTGCTGCCCAGGATGGACCTaGGCCACCCAGGATGCCGCTGGCCTCAGCCAGGGC +
Preference number: 3 (lower is better)
Translates to: QKGTRLCCPGWT*ATQDAAGLSQG
Trigger: GCCCTGGCTGAGGCCAGCGGCATCCTGGGTGGCCCAGGTCCATCCTGGGCAGCAAAGGCGTGTCCCCTTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR TCA 72 bp CGCTTAGGGGTGCCCAGAGCAGGGCATGGCATCATGTaGCCATGGCGGGAAGATGCTGGCCGTGGAGGCCCC +
Preference number: 3 (lower is better)
Translates to: RLGVPRAGHGIM*PWREDAGRGGP
Trigger: GGGGCCTCCACGGCCAGCATCTTCCCGCCATGGTCACATGATGCCATGCCCTGCTCTGGGCACCCCTAAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR GCA 72 bp GGGCCTCGCCAGGTGGAAAGCCCTAGGAAGGCTGCGTaGTCTGCAAACCCAGGGGTGCTGTGGCCGTACAGC +
Preference number: 3 (lower is better)
Translates to: GPRQVESPRKAA*SANPGVLWPYS
Trigger: GCTGTACGGCCACAGCACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGGGCTTTCCACCTGGCGAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
3UTR CCA 72 bp AGGAAGGCTGCGTGCTCTGCAAACCCAGGGGTGCTGTaGCCGTACAGCAGGGGCGTCCGTGTCCAGGCAGCT +
Preference number: 3 (lower is better)
Translates to: RKAACSANPGVL*PYSRGVRVQAA
Trigger: AGCTGCCTGGACACGGACGCCCCTGCTGTACGGCCACAGCACCCCTGGGTTTGCAGAGCACGCAGCCTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
3UTR-3UTR CAA 90 bp AGTGGCTGTCAGGCCCTTGTCATGGCTGAGTGGCCACCAGGGTGCGGGTTGGTGGGATGTGAAGCCACCTaGGGTGGGCGGCTCGGAGCT +
Preference number: 3 (lower is better)
Translates to: SGCQALVMAEWPPGCGLVGCEAT*GGRLGA
Trigger: AGCTCCGAGCCGCCCACCCAAGGTGGCTTCACATCC...CACCAACCCGCACCCTGGTGGCCACTCAGCCATGACAAGGGCCTGACAGCCACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR CAA 90 bp TGGGGGCAGTTAGGTCAGCCTCGGGGCAGGATGCTTCAGGGCCGAGAACAGTGCTTTGGCCAGCTCCGGTaGCTGGGGATGGCCACACCC +
Preference number: 3 (lower is better)
Translates to: WGQLGQPRGRMLQGREQCFGQLR*LGMATP
Trigger: GGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAA...GCACTGTTCTCGGCCCTGAAGCATCCTGCCCCGAGGCTGACCTAACTGCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR CAA 90 bp AGGAGGCTCTGCAGTCCCGGTGGGGTCATCTTGCCTCTCCGGACTGCTCCCTCTAGCGAGGCCTCTGGTTaGGCCAGCTCCGGTTGCTGG +
Preference number: 3 (lower is better)
Translates to: RRLCSPGGVILPLRTAPSSEASG*ASSGCW
Trigger: CCAGCAACCGGAGCTGGCCAAACCAGAGGCCTCGCT...AGAGGGAGCAGTCCGGAGAGGCAAGATGACCCCACCGGGACTGCAGAGCCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR-3UTR CAA 90 bp CTGACCCCTGGACTGGCTCCCATCTCGGGAATGACGCCTGCCGTGGGAATCGTGAGCGAGGCCTCTGGTTaGGCCAGCTCCGGTTGCTGG +
Preference number: 3 (lower is better)
Translates to: LTPGLAPISGMTPAVGIVSEASG*ASSGCW
Trigger: CCAGCAACCGGAGCTGGCCAAACCAGAGGCCTCGCT...CACGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAGCCAGTCCAGGGGTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
3UTR-3UTR CAA 90 bp TGCCCAGGCTGTCACAGCCTTGCAGTGCATGGTGGGTTCCGTGGCCAACTTGCCCCCGGTGGGGTCATCTaGCCTCTCCGGACTGCTCCC +
Preference number: 3 (lower is better)
Translates to: CPGCHSLAVHGGFRGQLAPGGVI*PLRTAP
Trigger: GGGAGCAGTCCGGAGAGGCAAGATGACCCCACCGGG...GGCAAGTTGGCCACGGAACCCACCATGCACTGCAAGGCTGTGACAGCCTGGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR-3UTR CAA 90 bp TGCCCAGGCTGTCACAGCCTTGCAGTGCATGGTGGGTTCCGTGGCCAACTTGCCAGCGAGGCCTCTGGTTaGGCCAGCTCCGGTTGCTGG +
Preference number: 3 (lower is better)
Translates to: CPGCHSLAVHGGFRGQLASEASG*ASSGCW
Trigger: CCAGCAACCGGAGCTGGCCAAACCAGAGGCCTCGCT...GGCAAGTTGGCCACGGAACCCACCATGCACTGCAAGGCTGTGACAGCCTGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR-3UTR CAA 90 bp GTCCAGCTGGGGGCAGTTAGGTCAGCCTCGGGGCAGGATGCTTCAGGGCCGAGACAGGCTGTCACAGCCTaGCAGTGCATGGTGGGTTCC +
Preference number: 3 (lower is better)
Translates to: VQLGAVRSASGQDASGPRQAVTA*QCMVGS
Trigger: GGAACCCACCATGCACTGCAAGGCTGTGACAGCCTG...TCTCGGCCCTGAAGCATCCTGCCCCGAGGCTGACCTAACTGCCCCCAGCTGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR TCA 72 bp CTGCCCCACGACAGCTGCGTCTGCAAGCGCCAGCTCTaGGCACTGTTCTCCGCCGACATGAGGACACCATCC +
Preference number: 3 (lower is better)
Translates to: LPHDSCVCKRQL*ALFSADMRTPS
Trigger: GGATGGTGTCCTCATGTCGGCGGAGAACAGTGCTCAGAGCTGGCGCTTGCAGACGCAGCTGTCGTGGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR TCA 72 bp GGGAGGGGTCTCCCCCTGGGCACTGGCATGGAGATGTaGCGGAGTGTGGTTTCACGGCGGCCAACTGTTGCT +
Preference number: 3 (lower is better)
Translates to: GRGLPLGTGMEM*RSVVSRRPTVA
Trigger: AGCAACAGTTGGCCGCCGTGAAACCACACTCCGTCACATCTCCATGCCAGTGCCCAGGGGGAGACCCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CCA 72 bp TGGATGGGAAGTGCCTGTGTGGATGTGAAGCCACCTTaGGTGGGCGGCTCGGAGCTCCTCTGCCCACATCGC +
Preference number: 3 (lower is better)
Translates to: WMGSACVDVKPP*VGGSELLCPHR
Trigger: GCGATGTGGGCAGAGGAGCTCCGAGCCGCCCACCCAAGGTGGCTTCACATCCACACAGGCACTTCCCATCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR CCA 72 bp AAGGAAAGTGTGGAGTGCGGAGCGAGGCCTCTGGTTTaGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTG +
Preference number: 3 (lower is better)
Translates to: KESVECGARPLV*PAPVAGDGHTL
Trigger: CAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
3UTR CCA 72 bp AGGGCATGGCATCATGTGACCATGGCGGGAAGATGCTaGCCGTGGAGGCCCCATCACAGAGGCAAGGAGCCC +
Preference number: 3 (lower is better)
Translates to: RAWHHVTMAGRC*PWRPHHRGKEP
Trigger: GGGCTCCTTGCCTCTGTGATGGGGCCTCCACGGCCAGCATCTTCCCGCCATGGTCACATGATGCCATGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR CAA 90 bp CCGGTGGGGTCATCTTGCCTCTCCGGACTGCTCCCTCTGACTGGTGAAGCCACAAGAGATTGGTGTGGGTaGACCTGGCCTATGCGGGGC +
Preference number: 3 (lower is better)
Translates to: PVGSSCLSGLLPLTGEATRDWCG*TWPMRG
Trigger: GCCCCGCATAGGCCAGGTCAACCCACACCAATCTCT...TGTGGCTTCACCAGTCAGAGGGAGCAGTCCGGAGAGGCAAGATGACCCCACCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR-3UTR CAA 90 bp TGCGGACAGGTCCTTGTTAGTAAGGAGGAGGCTCTGCAGTCCCGGTGGGGTCATTTTGGCCAGCTCCGGTaGCTGGGGATGGCCACACCC +
Preference number: 3 (lower is better)
Translates to: CGQVLVSKEEALQSRWGHFGQLR*LGMATP
Trigger: GGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAA...ATGACCCCACCGGGACTGCAGAGCCTCCTCCTTACTAACAAGGACCTGTCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR GCA 72 bp AAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTaGACCGTGCTGAGCAGAGCGGGGCCTCGCCAGGTG +
Preference number: 3 (lower is better)
Translates to: KRAQAPRQQHSL*TVLSRAGPRQV
Trigger: CACCTGGCGAGGCCCCGCTCTGCTCAGCACGGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
3UTR GCA 72 bp ATGGACGGGTGGGCAAGTCTGCCCTTGGCCCAGGGGTaGCACTTGCCCAGGCTTATGCAGATGAGTCTAGGC +
Preference number: 3 (lower is better)
Translates to: MDGWASLPLAQG*HLPRLMQMSLG
Trigger: GCCTAGACTCATCTGCATAAGCCTGGGCAAGTGGCACCCCTGGGCCAAGGGCAGACTTGCCCACCCGTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR GCA 72 bp CAGCCTCGGGGCAGGATGCTTCAGGGCCGAGAACAGTaGCCAAAGCGCAGCCACTGTGTTGTGTGTCCTCTG +
Preference number: 3 (lower is better)
Translates to: QPRGRMLQGREQ*PKRSHCVVCPL
Trigger: CAGAGGACACACAACACAGTGGCTGCGCTTTGGGCACTGTTCTCGGCCCTGAAGCATCCTGCCCCGAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR GCA 72 bp AGCAGGGCATGGCATCATGTGACCATGGCGGGAAGATaGTGGCCGTGGAGGCCCCATCACAGAGGCAAGGAG +
Preference number: 3 (lower is better)
Translates to: SRAWHHVTMAGR*WPWRPHHRGKE
Trigger: CTCCTTGCCTCTGTGATGGGGCCTCCACGGCCAGCATCTTCCCGCCATGGTCACATGATGCCATGCCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR GCA 72 bp TGTCAGGCCCTTGTCATGGCTGAGTGGCCACCAGGGTaGGGGTTGGTGGCCATGAAGCCACCCAAGGCAACA +
Preference number: 3 (lower is better)
Translates to: CQALVMAEWPPG*GLVAMKPPKAT
Trigger: TGTTGCCTTGGGTGGCTTCATGGCCACCAACCCGCACCCTGGTGGCCACTCAGCCATGACAAGGGCCTGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CCA 72 bp AGGCTGTCACAGCCTTGCAGTGCATGGTGGGTTCCGTaGCCAACTTGCCAGGGGACAGGCCTGTTGCTGGCA +
Preference number: 3 (lower is better)
Translates to: RLSQPCSAWWVP*PTCQGTGLLLA
Trigger: TGCCAGCAACAGGCCTGTCCCCTGGCAAGTTGGCCACGGAACCCACCATGCACTGCAAGGCTGTGACAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR CCA 72 bp TCAGGCTGCTGTGACCCGGGCGTTTCTCTCGTATCTTaGGCATGTGGAGAGCTTCCCCTTCTGCAGGGGGCC +
Preference number: 3 (lower is better)
Translates to: SGCCDPGVSLVS*ACGELPLLQGA
Trigger: GGCCCCCTGCAGAAGGGGAAGCTCTCCACATGCCCAAGATACGAGAGAAACGCCCGGGTCACAGCAGCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR CAA 90 bp CACTCTGTGAAGCTGTCTGACAGAAGGGGACACGCCTTTGCTGCCCAGGATGGAGGATGTGAAGCCACCTaGGGTGGGCGGCTCGGAGCT +
Preference number: 3 (lower is better)
Translates to: HSVKLSDRRGHAFAAQDGGCEAT*GGRLGA
Trigger: AGCTCCGAGCCGCCCACCCAAGGTGGCTTCACATCC...TCCATCCTGGGCAGCAAAGGCGTGTCCCCTTCTGTCAGACAGCTTCACAGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR-3UTR CAA 90 bp TGGGGGCAGTTAGGTCAGCCTCGGGGCAGGATGCTTCAGGGCCGAGAACAGTGCACAGCAGCATTCACTTaGCACCGTGCTGAGCAGAGC +
Preference number: 3 (lower is better)
Translates to: WGQLGQPRGRMLQGREQCTAAFT*HRAEQS
Trigger: GCTCTGCTCAGCACGGTGCAAAGTGAATGCTGCTGT...GCACTGTTCTCGGCCCTGAAGCATCCTGCCCCGAGGCTGACCTAACTGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR CAA 90 bp GGATTTATTGGGGGAACCGTACAAGCAGAGGAGAAGCAGGGGTGCCCAGGCTGTAGCGAGGCCTCTGGTTaGGCCAGCTCCGGTTGCTGG +
Preference number: 3 (lower is better)
Translates to: GFIGGTVQAEEKQGCPGCSEASG*ASSGCW
Trigger: CCAGCAACCGGAGCTGGCCAAACCAGAGGCCTCGCT...ACAGCCTGGGCACCCCTGCTTCTCCTCTGCTTGTACGGTTCCCCCAATAAATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR TCA 72 bp AGGCTCCAAGACAGCAGCATTCACTTTGCACCGTGCTaGGCAGAGCGGGGCCTCGCCAGGTGGAAAGCCCTA +
Preference number: 3 (lower is better)
Translates to: RLQDSSIHFAPC*AERGLARWKAL
Trigger: TAGGGCTTTCCACCTGGCGAGGCCCCGCTCTGCTCAGCACGGTGCAAAGTGAATGCTGCTGTCTTGGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
3UTR GCA 72 bp GCTGCGGACAGGTCCTTGTTAGTAAGGAGGAGGCTCTaGAGTCCCGGTGGGGTCATCTTGCCTCTCCGGACT +
Preference number: 3 (lower is better)
Translates to: AADRSLLVRRRL*SPGGVILPLRT
Trigger: AGTCCGGAGAGGCAAGATGACCCCACCGGGACTGCAGAGCCTCCTCCTTACTAACAAGGACCTGTCCGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR GCA 72 bp CATCCTGCCTCTTCCAGCAACACGACGCAAATGTCCTaGCATATCCGGGCCTGGGAGAGGCCACAGGCTGCA +
Preference number: 3 (lower is better)
Translates to: HPASSSNTTQMS*HIRAWERPQAA
Trigger: TGCAGCCTGTGGCCTCTCCCAGGCCCGGATATGGCAGGACATTTGCGTCGTGTTGCTGGAAGAGGCAGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CCA 72 bp ACAGAAAGGAAAGTGTGGAGTGCGGAGCGAGGCCTCTaGTTTGGCCAGCTCCGGTTGCTGGGGATGGCCACA +
Preference number: 3 (lower is better)
Translates to: TERKVWSAERGL*FGQLRLLGMAT
Trigger: TGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTTTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
3UTR CCA 72 bp TCCCCCTGGGCACTGGCATGGAGATGTGACGGAGTGTaGTTTCACGGCGGCCAACTGTTGCTGCAAGAGGGA +
Preference number: 3 (lower is better)
Translates to: SPWALAWRCDGV*FHGGQLLLQEG
Trigger: TCCCTCTTGCAGCAACAGTTGGCCGCCGTGAAACCACACTCCGTCACATCTCCATGCCAGTGCCCAGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CCA 72 bp CCAGAGGCCCCAACCCCAGGTGTCTCCGTCCACTCTTaGTCCAGGTTACGTCTGGGCCAGGTGACTGTAACA +
Preference number: 3 (lower is better)
Translates to: PEAPTPGVSVHS*SRLRLGQVTVT
Trigger: TGTTACAGTCACCTGGCCCAGACGTAACCTGGACCAAGAGTGGACGGAGACACCTGGGGTTGGGGCCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CCA 72 bp TTGTGTGTCCTCTGCCATAGGCAAAGGATGGACGGGTaGGCAAGTCTGCCCTTGGCCCAGGGGTGCCACTTG +
Preference number: 3 (lower is better)
Translates to: LCVLCHRQRMDG*ASLPLAQGCHL
Trigger: CAAGTGGCACCCCTGGGCCAAGGGCAGACTTGCCCACCCGTCCATCCTTTGCCTATGGCAGAGGACACACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CCA 72 bp CCACTGTGTTGTGTGTCCTCTGCCATAGGCAAAGGATaGACGGGTGGGCAAGTCTGCCCTTGGCCCAGGGGT +
Preference number: 3 (lower is better)
Translates to: PLCCVSSAIGKG*TGGQVCPWPRG
Trigger: ACCCCTGGGCCAAGGGCAGACTTGCCCACCCGTCCATCCTTTGCCTATGGCAGAGGACACACAACACAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CCA 72 bp GAGTACTGGGTCTGTAGCCTTGGCCATGAGTCCAGCTaGGGGCAGTTAGGTCAGCCTCGGGGCAGGATGCTT +
Preference number: 3 (lower is better)
Translates to: EYWVCSLGHESS*GQLGQPRGRML
Trigger: AAGCATCCTGCCCCGAGGCTGACCTAACTGCCCCCAGCTGGACTCATGGCCAAGGCTACAGACCCAGTACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CCA 72 bp CCTCGGGCATGGCTGCCTCCTGTGGGCGTACACATTTaGACCACACAGTGGGAGTCGGGATTGGAGTACTGG +
Preference number: 3 (lower is better)
Translates to: PRAWLPPVGVHI*TTQWESGLEYW
Trigger: CCAGTACTCCAATCCCGACTCCCACTGTGTGGTCCAAATGTGTACGCCCACAGGAGGCAGCCATGCCCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CCA 72 bp TCACTTAGTGGCTGTCAGGCCCTTGTCATGGCTGAGTaGCCACCAGGGTGCGGGTTGGTGGCCATGAAGCCA +
Preference number: 3 (lower is better)
Translates to: SLSGCQALVMAE*PPGCGLVAMKP
Trigger: TGGCTTCATGGCCACCAACCCGCACCCTGGTGGCCACTCAGCCATGACAAGGGCCTGACAGCCACTAAGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CCA 72 bp TCTGAAGCTCACTTAGTGGCTGTCAGGCCCTTGTCATaGCTGAGTGGCCACCAGGGTGCGGGTTGGTGGCCA +
Preference number: 3 (lower is better)
Translates to: SEAHLVAVRPLS*LSGHQGAGWWP
Trigger: TGGCCACCAACCCGCACCCTGGTGGCCACTCAGCCATGACAAGGGCCTGACAGCCACTAAGTGAGCTTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR CAA 90 bp ACAGAAAGGAAAGTGTGGAGTGCGGAGCGAGGCCTCTGGTTTGGCCAGCTCCGGGCGGGGCAGCTCAGTTaGAAGCAGGAACTTCCCCAA +
Preference number: 3 (lower is better)
Translates to: TERKVWSAERGLWFGQLRAGQLS*KQELPQ
Trigger: TTGGGGAAGTTCCTGCTTCAAACTGAGCTGCCCCGC...CCGGAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
3UTR-3UTR CAA 90 bp GATTTATTGGGGGAACCGTACAAGCAGAGGAGAAGCAGGGGTGCCCAGGCTGTCGAAGGGGACACGCCTTaGCTGCCCAGGATGGACCTG +
Preference number: 3 (lower is better)
Translates to: DLLGEPYKQRRSRGAQAVEGDTP*LPRMDL
Trigger: CAGGTCCATCCTGGGCAGCAAAGGCGTGTCCCCTTC...GACAGCCTGGGCACCCCTGCTTCTCCTCTGCTTGTACGGTTCCCCCAATAAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR-3UTR CAA 90 bp CTTCAGGGCCGAGAACAGTGCCCAAAGCGCAGCCACTGTGTTGTGTGTCCTCTGCAGGCTGTCACAGCCTaGCAGTGCATGGTGGGTTCC +
Preference number: 3 (lower is better)
Translates to: LQGREQCPKRSHCVVCPLQAVTA*QCMVGS
Trigger: GGAACCCACCATGCACTGCAAGGCTGTGACAGCCTG...CAGAGGACACACAACACAGTGGCTGCGCTTTGGGCACTGTTCTCGGCCCTGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR TCA 72 bp TGTGGGTTGACCTGGCCTATGCGGGGCAGCTCAGTTTaGAGCAGGAACTTCCCCAAACGTGCCCAGGCTCCA +
Preference number: 3 (lower is better)
Translates to: CGLTWPMRGSSV*SRNFPKRAQAP
Trigger: TGGAGCCTGGGCACGTTTGGGGAAGTTCCTGCTTCAAACTGAGCTGCCCCGCATAGGCCAGGTCAACCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
3UTR TCA 72 bp CGGTGGGGTCATCTTGCCTCTCCGGACTGCTCCCTCTaGCTGGTGAAGCCACACTCTGTGAAGCTGTCTGAC +
Preference number: 3 (lower is better)
Translates to: RWGHLASPDCSL*LVKPHSVKLSD
Trigger: GTCAGACAGCTTCACAGAGTGTGGCTTCACCAGTCAGAGGGAGCAGTCCGGAGAGGCAAGATGACCCCACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR CCA 72 bp TCAGCAAGTACCTTCCTCGGGCATGGCTGCCTCCTGTaGGCGTACACATTTGGACCACACAGTGGGAGTCGG +
Preference number: 3 (lower is better)
Translates to: SASTFLGHGCLL*AYTFGPHSGSR
Trigger: CCGACTCCCACTGTGTGGTCCAAATGTGTACGCCCACAGGAGGCAGCCATGCCCGAGGAAGGTACTTGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR CAA 90 bp ATGTGGTGCAAATGTCATACAGCAGGGTTTGTGGGCGAAGCACCAGCAGAGGCAGGATGTGAAGCCACCTaGGGTGGGCGGCTCGGAGCT +
Preference number: 3 (lower is better)
Translates to: MWCKCHTAGFVGEAPAEAGCEAT*GGRLGA
Trigger: AGCTCCGAGCCGCCCACCCAAGGTGGCTTCACATCC...TGCCTCTGCTGGTGCTTCGCCCACAAACCCTGCTGTATGACATTTGCACCACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR CAA 90 bp GCACAGAAAGGAAAGTGTGGAGTGCGGAGCGAGGCCTCTGGTTTGGCCAGCTCCACAGCAGCATTCACTTaGCACCGTGCTGAGCAGAGC +
Preference number: 3 (lower is better)
Translates to: AQKGKCGVRSEASGLASSTAAFT*HRAEQS
Trigger: GCTCTGCTCAGCACGGTGCAAAGTGAATGCTGCTGT...GGAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTTTCTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
3UTR-3UTR CAA 90 bp CGTCCATTGGAGAATCTCAGCCCAGCAACGCGAGCTGCCGTCTGTCTTCTAAGGACTGGGTCTGTAGCCTaGGCCATGAGTCCAGCTGGG +
Preference number: 3 (lower is better)
Translates to: RPLENLSPATRAAVCLLRTGSVA*AMSPAG
Trigger: CCCAGCTGGACTCATGGCCAAGGCTACAGACCCAGT...CCTTAGAAGACAGACGGCAGCTCGCGTTGCTGGGCTGAGATTCTCCAATGGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR CAA 90 bp ATGTGGTGCAAATGTCATACAGCAGGGTTTGTGGGCGAAGCACCAGCAGAGGCAGCCCAGGGGTGCCACTaGCCCAGGCTTATGCAGATG +
Preference number: 3 (lower is better)
Translates to: MWCKCHTAGFVGEAPAEAAQGCH*PRLMQM
Trigger: CATCTGCATAAGCCTGGGCAAGTGGCACCCCTGGGC...TGCCTCTGCTGGTGCTTCGCCCACAAACCCTGCTGTATGACATTTGCACCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR TCA 72 bp GCAAGCGCCAGCTCTGAGCACTGTTCTCCGCCGACATaGGGACACCATCCAAGAATTCCTCCTGGGAGACCT +
Preference number: 3 (lower is better)
Translates to: ASASSEHCSPPT*GHHPRIPPGRP
Trigger: AGGTCTCCCAGGAGGAATTCTTGGATGGTGTCCTCATGTCGGCGGAGAACAGTGCTCAGAGCTGGCGCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR TCA 72 bp CCTCTGACTGGTGAAGCCACACTCTGTGAAGCTGTCTaGCAGAAGGGGACACGCCTTTGCTGCCCAGGATGG +
Preference number: 3 (lower is better)
Translates to: PLTGEATLCEAV*QKGTRLCCPGW
Trigger: CCATCCTGGGCAGCAAAGGCGTGTCCCCTTCTGTCAGACAGCTTCACAGAGTGTGGCTTCACCAGTCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR GCA 72 bp AGTGCCCAAAGCGCAGCCACTGTGTTGTGTGTCCTCTaGCATAGGCAAAGGATGGACGGGTGGGCAAGTCTG +
Preference number: 3 (lower is better)
Translates to: SAQSAATVLCVL*HRQRMDGWASL
Trigger: CAGACTTGCCCACCCGTCCATCCTTTGCCTATGGCAGAGGACACACAACACAGTGGCTGCGCTTTGGGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CCA 72 bp ATTTGGACCACACAGTGGGAGTCGGGATTGGAGTACTaGGTCTGTAGCCTTGGCCATGAGTCCAGCTGGGGG +
Preference number: 3 (lower is better)
Translates to: IWTTQWESGLEY*VCSLGHESSWG
Trigger: CCCCCAGCTGGACTCATGGCCAAGGCTACAGACCCAGTACTCCAATCCCGACTCCCACTGTGTGGTCCAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CCA 72 bp TTCCCCTTCTGCAGGGGGCCTGATCAGAGGTCCAGCTaGTGGCGGCATGAACTGGACCATCTTTCAGCAAGT +
Preference number: 3 (lower is better)
Translates to: FPFCRGPDQRSS*WRHELDHLSAS
Trigger: ACTTGCTGAAAGATGGTCCAGTTCATGCCGCCACCAGCTGGACCTCTGATCAGGCCCCCTGCAGAAGGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR GCA 72 bp GTGACGGAGTGTGGTTTCACGGCGGCCAACTGTTGCTaGAAGAGGGATGTGAACAAGTACCAGCTCCACACG +
Preference number: 3 (lower is better)
Translates to: VTECGFTAANCC*KRDVNKYQLHT
Trigger: CGTGTGGAGCTGGTACTTGTTCACATCCCTCTTGCAGCAACAGTTGGCCGCCGTGAAACCACACTCCGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR GCA 72 bp GGCGTAACGCAGGCTAATGGCGAGAACAGAGCATCCTaGCTCTTCCAGCAACACGACGCAAATGTCCTGCCA +
Preference number: 3 (lower is better)
Translates to: GVTQANGENRAS*LFQQHDANVLP
Trigger: TGGCAGGACATTTGCGTCGTGTTGCTGGAAGAGGCAGGATGCTCTGTTCTCGCCATTAGCCTGCGTTACGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CCA 72 bp CTGCCTCCTGTGGGCGTACACATTTGGACCACACAGTaGGAGTCGGGATTGGAGTACTGGGTCTGTAGCCTT +
Preference number: 3 (lower is better)
Translates to: LPPVGVHIWTTQ*ESGLEYWVCSL
Trigger: AAGGCTACAGACCCAGTACTCCAATCCCGACTCCCACTGTGTGGTCCAAATGTGTACGCCCACAGGAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR CAA 90 bp ATGTGGTGCAAATGTCATACAGCAGGGTTTGTGGGCGAAGCACCAGCAGAGGCAAGCGCAGCCACTGTGTaGTGTGTCCTCTGCCATAGG +
Preference number: 3 (lower is better)
Translates to: MWCKCHTAGFVGEAPAEASAATV*CVLCHR
Trigger: CCTATGGCAGAGGACACACAACACAGTGGCTGCGCT...TGCCTCTGCTGGTGCTTCGCCCACAAACCCTGCTGTATGACATTTGCACCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR GCA 72 bp GGGCAGCTCAGTTTGAAGCAGGAACTTCCCCAAACGTaGCCAGGCTCCAAGACAGCAGCATTCACTTTGCAC +
Preference number: 3 (lower is better)
Translates to: GQLSLKQELPQT*PGSKTAAFTLH
Trigger: GTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCCTGCTTCAAACTGAGCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
3UTR GCA 72 bp GATGTGACGGAGTGTGGTTTCACGGCGGCCAACTGTTaGTGCAAGAGGGATGTGAACAAGTACCAGCTCCAC +
Preference number: 3 (lower is better)
Translates to: DVTECGFTAANC*CKRDVNKYQLH
Trigger: GTGGAGCTGGTACTTGTTCACATCCCTCTTGCAGCAACAGTTGGCCGCCGTGAAACCACACTCCGTCACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR GCA 72 bp GACCATCTTTCAGCAAGTACCTTCCTCGGGCATGGCTaGCTCCTGTGGGCGTACACATTTGGACCACACAGT +
Preference number: 3 (lower is better)
Translates to: DHLSASTFLGHG*LLWAYTFGPHS
Trigger: ACTGTGTGGTCCAAATGTGTACGCCCACAGGAGGCAGCCATGCCCGAGGAAGGTACTTGCTGAAAGATGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CCA 72 bp GCGTACACATTTGGACCACACAGTGGGAGTCGGGATTaGAGTACTGGGTCTGTAGCCTTGGCCATGAGTCCA +
Preference number: 3 (lower is better)
Translates to: AYTFGPHSGSRD*STGSVALAMSP
Trigger: TGGACTCATGGCCAAGGCTACAGACCCAGTACTCCAATCCCGACTCCCACTGTGTGGTCCAAATGTGTACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR TCA 72 bp AGGACACCATCCAAGAATTCCTCCTGGGAGACCTCCTaGGGAGACGCGAAGACCATCGATGCTTTGGAAGAA +
Preference number: 3 (lower is better)
Translates to: RTPSKNSSWETS*GDAKTIDALEE
Trigger: TTCTTCCAAAGCATCGATGGTCTTCGCGTCTCCTCAGGAGGTCTCCCAGGAGGAATTCTTGGATGGTGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR TCA 72 bp CGTGAGGCAGAGGAAGAGTGGGCCAGTCCCGGTCAATaGCGCAAATATCCAAAAGGGAAGAGAAGCCGATAT +
Preference number: 3 (lower is better)
Translates to: REAEEEWASPGQ*RKYPKGKRSRY
Trigger: ATATCGGCTTCTCTTCCCTTTTGGATATTTGCGTCATTGACCGGGACTGGCCCACTCTTCCTCTGCCTCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR-3UTR CAA 90 bp CCAGTCCCGGTCAATGACGCAAATATCCAAAAGGGAAGAGAAGCCGATATTCTTTGTGGGCGTACACATTaGGACCACACAGTGGGAGTC +
Preference number: 3 (lower is better)
Translates to: PVPVNDANIQKGREADILCGRTH*DHTVGV
Trigger: GACTCCCACTGTGTGGTCCAAATGTGTACGCCCACA...AAGAATATCGGCTTCTCTTCCCTTTTGGATATTTGCGTCATTGACCGGGACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR TCA 90 bp GGCCTCTGGTTTGGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTGGCAGCAGCAGGAGCTGCCCCGCTaGGCTGCTGCCGGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: GLWFGQLRLLGMATPWQQQELPR*AAAGLH
Trigger: GTGCAGCCCGGCAGCAGCTCAGCGGGGCAGCTCCTG...CTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCAGAGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CAA 72 bp AGTGCGGAGCGAGGCCTCTGGTTTGGCCAGCTCCGGTaGCTGGGGATGGCCACACCCTGGCAGCAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: SAERGLWFGQLR*LGMATPWQQAA
Trigger: GGCCGCCTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCAGAGGCCTCGCTCCGCACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR GCA 90 bp GGCCTCTGGTTTGGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTGGCAGCAGCCTGGGCTCCCCCGCTaGGCCGTGTTGGGGCGTTTC +
Preference number: 4 (lower is better)
Translates to: GLWFGQLRLLGMATPWQQPGLPR*AVLGRF
Trigger: GAAACGCCCCAACACGGCGCAGCGGGGGAGCCCAGG...CTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCAGAGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp TGGTTTGGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTGGCAGCAGGCGGCCAAGGCGCCACCGCCCTaGCCCACGACAGCTGCGTCT +
Preference number: 4 (lower is better)
Translates to: WFGQLRLLGMATPWQQAAKAPPP*PTTAAS
Trigger: AGACGCAGCTGTCGTGGGGCAGGGCGGTGGCGCCTT...GGCCGCCTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR GCA 90 bp GGCCTCTGGTTTGGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTGGCAGCAGCTGGGCCACCCAGGATaGCGCTGGCCTCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GLWFGQLRLLGMATPWQQLGHPG*RWPQPG
Trigger: CCCTGGCTGAGGCCAGCGGCATCCTGGGTGGCCCAG...CTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCAGAGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR TCA 90 bp GGGAAGTGCCTGTGTGGATGTGAAGCCACCTTGGGTGGGCGGCTCGGAGCTCCTCAGGAGCTGCCCCGCTaGGCTGCTGCCGGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: GKCLCGCEATLGGRLGAPQELPR*AAAGLH
Trigger: GTGCAGCCCGGCAGCAGCTCAGCGGGGCAGCTCCTG...AGGAGCTCCGAGCCGCCCACCCAAGGTGGCTTCACATCCACACAGGCACTTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp GGCCTCTGGTTTGGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTGGCAGCAGCCGTCCTGCCCAGCCTaGAGCGTCTCCACGGCCTTC +
Preference number: 4 (lower is better)
Translates to: GLWFGQLRLLGMATPWQQPSCPA*SVSTAF
Trigger: GAAGGCCGTGGAGACGCTGCAGGCTGGGCAGGACGG...CTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCAGAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp GGCCTCTGGTTTGGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTGGCAGCAGAAGGCGCCACCGCCCTaGCCCACGACAGCTGCGTCT +
Preference number: 4 (lower is better)
Translates to: GLWFGQLRLLGMATPWQQKAPPP*PTTAAS
Trigger: AGACGCAGCTGTCGTGGGGCAGGGCGGTGGCGCCTT...CTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCAGAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CCA 90 bp CTCTGGTTTGGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTGGCAGCAGGCGGCCAGCTCCGGTTGCTaGGGATGGCCACACCCTGGC +
Preference number: 4 (lower is better)
Translates to: LWFGQLRLLGMATPWQQAASSGC*GWPHPG
Trigger: GCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGC...CGCCTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR TCA 90 bp CCTCGCCAGGTGGAAAGCCCTAGGAAGGCTGCGTGCTCTGCAAACCCAGGGGTGCGGCAGGCTCAGCAGTaGCAGGGCTCGGGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: PRQVESPRKAACSANPGVRQAQQ*QGSGCL
Trigger: GAGGCACCCCGAGCCCTGTCACTGCTGAGCCTGCCG...CACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGGGCTTTCCACCTGGCGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR TCA 90 bp TGGTTTGGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTGGCAGCAGGCGGCCCTCCCATCTCGGGAATaGCGCCTGCCGTGGGAATCG +
Preference number: 4 (lower is better)
Translates to: WFGQLRLLGMATPWQQAALPSRE*RLPWES
Trigger: CGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAG...GGCCGCCTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR TCA 90 bp TGGTTTGGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTGGCAGCAGGCGGCCATTACAGGGTGGGAGTaGAGGACCTCGCGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: WFGQLRLLGMATPWQQAAITGWE*RTSRLR
Trigger: CCGCAGCCGCGAGGTCCTTCACTCCCACCCTGTAAT...GGCCGCCTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp GCTCCAAGACAGCAGCATTCACTTTGCACCGTGCTGAGCAGAGCGGGGCCTCGCCCGGGGAGCCGGCCTTaGGGAACGCTCAGGCGCGCT +
Preference number: 4 (lower is better)
Translates to: APRQQHSLCTVLSRAGPRPGSRP*GTLRRA
Trigger: AGCGCGCCTGAGCGTTCCGCAAGGCCGGCTCCCCGG...GCGAGGCCCCGCTCTGCTCAGCACGGTGCAAAGTGAATGCTGCTGTCTTGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253928.14
CDS-3UTR GCA 90 bp CCAGGGGTGCTGTGGCCGTACAGCAGGGGCGTCCGTGTCCAGGCAGCTTTGTCAGCGTCCATGTCCTGGTaGTCGTCTGGGGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: PGVLWPYSRGVRVQAALSASMSW*SSGASG
Trigger: GCCCGAGGCCCCAGACGAGCACCAGGACATGGACGC...TGACAAAGCTGCCTGGACACGGACGCCCCTGCTGTACGGCCACAGCACCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp CGCCCTGCCCCACGACAGCTGCGTCTGCAAGCGCCAGCTCTGAGCACTGTTCTCCAGCCAGGGCACGTGTaGCCAGCGCTGGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: RPAPRQLRLQAPALSTVLQPGHV*PALAPA
Trigger: AGCAGGAGCCAGCGCTGGGCACACGTGCCCTGGCTG...GAGAACAGTGCTCAGAGCTGGCGCTTGCAGACGCAGCTGTCGTGGGGCAGGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp TCGGGGCAGGATGCTTCAGGGCCGAGAACAGTGCCCAAAGCGCAGCCACTGTGTGAGCTGCTGCCGGGCTaGACGCTCCGCGGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: SGQDASGPRTVPKAQPLCELLPG*TLRGQR
Trigger: ACGCTGGCCGCGGAGCGTGCAGCCCGGCAGCAGCTC...ACACAGTGGCTGCGCTTTGGGCACTGTTCTCGGCCCTGAAGCATCCTGCCCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp TGGGGGCAGTTAGGTCAGCCTCGGGGCAGGATGCTTCAGGGCCGAGAACAGTGCGCACCAGCCCAGGAGTaGGCTCGGGCTCCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: WGQLGQPRGRMLQGREQCAPAQE*ARAPQG
Trigger: GCCCTGAGGAGCCCGAGCCCACTCCTGGGCTGGTGC...GCACTGTTCTCGGCCCTGAAGCATCCTGCCCCGAGGCTGACCTAACTGCCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp AGCCCTAGGAAGGCTGCGTGCTCTGCAAACCCAGGGGTGCTGTGGCCGTACAGCCCCGCTGCGCCGTGTTaGGGCGTTTCTCCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: SPRKAACSANPGVLWPYSPAAPC*GVSPAA
Trigger: GGCAGCGGGAGAAACGCCCCAACACGGCGCAGCGGG...GCTGTACGGCCACAGCACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp TGGAAAGCCCTAGGAAGGCTGCGTGCTCTGCAAACCCAGGGGTGCTGTGGCCGTAGAGAGGCCAGCGCCTaGGCTCCCCCGCTGCGCCGT +
Preference number: 4 (lower is better)
Translates to: WKALGRLRALQTQGCCGRREASA*APPLRR
Trigger: ACGGCGCAGCGGGGGAGCCCAGGCGCTGGCCTCTCT...ACGGCCACAGCACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGGGCTTTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344592.9
CDS-3UTR TCA 90 bp CAGCCTCGGGGCAGGATGCTTCAGGGCCGAGAACAGTGCCCAAAGCGCAGCCACGGCAGTGACCACGCATaGCAGTCACCCGTCGGCCCT +
Preference number: 4 (lower is better)
Translates to: QPRGRMLQGREQCPKRSHGSDHA*QSPVGP
Trigger: AGGGCCGACGGGTGACTGTCATGCGTGGTCACTGCC...GTGGCTGCGCTTTGGGCACTGTTCTCGGCCCTGAAGCATCCTGCCCCGAGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR TCA 90 bp GGCCTCTGGTTTGGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTGGCAGCAGGTGCCTGTGTGGATGTaGAGCCACCTTGGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: GLWFGQLRLLGMATPWQQVPVWM*SHLGWA
Trigger: CGCCCACCCAAGGTGGCTTCACATCCACACAGGCAC...CTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCAGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR TCA 90 bp AGTGGCTGTCAGGCCCTTGTCATGGCTGAGTGGCCACCAGGGTGCGGGTTGGTGCACTTTGCACCGTGCTaGGCAGAGCGGGGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: SGCQALVMAEWPPGCGLVHFAPC*AERGLA
Trigger: GGCGAGGCCCCGCTCTGCTCAGCACGGTGCAAAGTG...CACCAACCCGCACCCTGGTGGCCACTCAGCCATGACAAGGGCCTGACAGCCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR TCA 90 bp TGGTTTGGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTGGCAGCAGGCGGCCGAGATTGGTGTGGGTTaGCCTGGCCTATGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: WFGQLRLLGMATPWQQAAEIGVG*PGLCGA
Trigger: TGCCCCGCATAGGCCAGGTCAACCCACACCAATCTC...GGCCGCCTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR TCA 90 bp CTCTGGTTTGGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTGGCAGCAGGCGCTCCCATCTCGGGAATaGCGCCTGCCGTGGGAATCG +
Preference number: 4 (lower is better)
Translates to: LWFGQLRLLGMATPWQQALPSRE*RLPWES
Trigger: CGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAG...CGCCTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR TCA 90 bp GGCCTCTGGTTTGGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTGGCAGCAGATTACAGGGTGGGAGTaGAGGACCTCGCGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: GLWFGQLRLLGMATPWQQITGWE*RTSRLR
Trigger: CCGCAGCCGCGAGGTCCTTCACTCCCACCCTGTAAT...CTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCAGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp TGGTTTGGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTGGCAGCAGGCGGCCGGGGACCCGGACCCCTaGGGTAGAGCAAACTATCCA +
Preference number: 4 (lower is better)
Translates to: WFGQLRLLGMATPWQQAAGDPDP*GRANYP
Trigger: TGGATAGTTTGCTCTACCGCAGGGGTCCGGGTCCCC...GGCCGCCTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp GCTCCAAGACAGCAGCATTCACTTTGCACCGTGCTGAGCAGAGCGGGGCCTCGCCCTGGGCTCCCCCGCTaGGCCGTGTTGGGGCGTTTC +
Preference number: 4 (lower is better)
Translates to: APRQQHSLCTVLSRAGPRPGLPR*AVLGRF
Trigger: GAAACGCCCCAACACGGCGCAGCGGGGGAGCCCAGG...GCGAGGCCCCGCTCTGCTCAGCACGGTGCAAAGTGAATGCTGCTGTCTTGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp GGAAGTGCCTGTGTGGATGTGAAGCCACCTTGGGTGGGCGGCTCGGAGCTCCTCAAGGCGCCACCGCCCTaGCCCACGACAGCTGCGTCT +
Preference number: 4 (lower is better)
Translates to: GSACVDVKPPWVGGSELLKAPPP*PTTAAS
Trigger: AGACGCAGCTGTCGTGGGGCAGGGCGGTGGCGCCTT...GAGGAGCTCCGAGCCGCCCACCCAAGGTGGCTTCACATCCACACAGGCACTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp GTCCAGCTGGGGGCAGTTAGGTCAGCCTCGGGGCAGGATGCTTCAGGGCCGAGAGGGACACGCCTTTGCTaGCCAGGATGGACCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VQLGAVRSASGQDASGPRGTRLC*PGWTWA
Trigger: GGCCCAGGTCCATCCTGGGCAGCAAAGGCGTGTCCC...TCTCGGCCCTGAAGCATCCTGCCCCGAGGCTGACCTAACTGCCCCCAGCTGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp ACAGAAAGGAAAGTGTGGAGTGCGGAGCGAGGCCTCTGGTTTGGCCAGCTCCGGGCTGCCCCGCTGAGCTaGTGCCGGGCTGCACGCTCC +
Preference number: 4 (lower is better)
Translates to: TERKVWSAERGLWFGQLRAAPLS*CRAARS
Trigger: GGAGCGTGCAGCCCGGCAGCAGCTCAGCGGGGCAGC...CCGGAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTTTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp CTCTGGTTTGGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTGGCAGCAGGCGTCTGCGTCCATGTCCTaGTGCTCGTCTGGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: LWFGQLRLLGMATPWQQASASMS*CSSGAS
Trigger: CGAGGCCCCAGACGAGCACCAGGACATGGACGCAGA...CGCCTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp TGTGGAGTGCGGAGCGAGGCCTCTGGTTTGGCCAGCTCCGGTTGCTGGGGATGGTCCGGTTGCTGGGGATaGCCACACCCTGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: CGVRSEASGLASSGCWGWSGCWG*PHPGSR
Trigger: CCTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGA...CCATCCCCAGCAACCGGAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CCA 90 bp CCTGGACTGGCTCCCATCTCGGGAATGACGCCTGCCGTGGGAATCGTGGAGAGGGCCAGCTCCGGTTGCTaGGGATGGCCACACCCTGGC +
Preference number: 4 (lower is better)
Translates to: PGLAPISGMTPAVGIVERASSGC*GWPHPG
Trigger: GCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGC...CCTCTCCACGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAGCCAGTCCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CCA 90 bp CCCCAACCCCAGGTGTCTCCGTCCACTCTTGGTCCAGGTTACGTCTGGGCCAGGGCCAGCTCCGGTTGCTaGGGATGGCCACACCCTGGC +
Preference number: 4 (lower is better)
Translates to: PQPQVSPSTLGPGYVWARASSGC*GWPHPG
Trigger: GCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGC...CCTGGCCCAGACGTAACCTGGACCAAGAGTGGACGGAGACACCTGGGGTTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp CAGCCTCGGGGCAGGATGCTTCAGGGCCGAGAACAGTGCCCAAAGCGCAGCCACGCGAGGCCTCTGGTTTaGCCAGCTCCGGTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: QPRGRMLQGREQCPKRSHARPLV*PAPVAG
Trigger: CCCAGCAACCGGAGCTGGCCAAACCAGAGGCCTCGC...GTGGCTGCGCTTTGGGCACTGTTCTCGGCCCTGAAGCATCCTGCCCCGAGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp GACCCCTGGACTGGCTCCCATCTCGGGAATGACGCCTGCCGTGGGAATCGTGGACACCCAGGATGCCGCTaGCCTCAGCCAGGGCACGTG +
Preference number: 4 (lower is better)
Translates to: DPWTGSHLGNDACRGNRGHPGCR*PQPGHV
Trigger: CACGTGCCCTGGCTGAGGCCAGCGGCATCCTGGGTG...TCCACGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAGCCAGTCCAGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp CTCTGGTTTGGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTGGCAGCAGGCGTGCCATATCCGGGCCTaGGAGAGGCCACAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LWFGQLRLLGMATPWQQACHIRA*ERPQAA
Trigger: TGCAGCCTGTGGCCTCTCCCAGGCCCGGATATGGCA...CGCCTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR TCA 90 bp GCACAGAAAGGAAAGTGTGGAGTGCGGAGCGAGGCCTCTGGTTTGGCCAGCTCCCGGCAGGCTCAGCAGTaGCAGGGCTCGGGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: AQKGKCGVRSEASGLASSRQAQQ*QGSGCL
Trigger: GAGGCACCCCGAGCCCTGTCACTGCTGAGCCTGCCG...GGAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTTTCTGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR TCA 90 bp AGGAGGCTCTGCAGTCCCGGTGGGGTCATCTTGCCTCTCCGGACTGCTCCCTCTGGCAGTGACCACGCATaGCAGTCACCCGTCGGCCCT +
Preference number: 4 (lower is better)
Translates to: RRLCSPGGVILPLRTAPSGSDHA*QSPVGP
Trigger: AGGGCCGACGGGTGACTGTCATGCGTGGTCACTGCC...AGAGGGAGCAGTCCGGAGAGGCAAGATGACCCCACCGGGACTGCAGAGCCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR TCA 90 bp CTCTGGTTTGGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTGGCAGCAGGCGTCCTGGGAGACCTCCTaGGGAGACGCGAAGACCATC +
Preference number: 4 (lower is better)
Translates to: LWFGQLRLLGMATPWQQASWETS*GDAKTI
Trigger: GATGGTCTTCGCGTCTCCTCAGGAGGTCTCCCAGGA...CGCCTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR TCA 90 bp CTCTGGTTTGGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTGGCAGCAGGCGGAGATTGGTGTGGGTTaGCCTGGCCTATGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: LWFGQLRLLGMATPWQQAEIGVG*PGLCGA
Trigger: TGCCCCGCATAGGCCAGGTCAACCCACACCAATCTC...CGCCTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR GCA 90 bp CAGCCTCGGGGCAGGATGCTTCAGGGCCGAGAACAGTGCCCAAAGCGCAGCCACGGATCCTTCAGCCTCTaGCGCTGCAGCAGCGAGCGT +
Preference number: 4 (lower is better)
Translates to: QPRGRMLQGREQCPKRSHGSFSL*RCSSER
Trigger: ACGCTCGCTGCTGCAGCGGCAGAGGCTGAAGGATCC...GTGGCTGCGCTTTGGGCACTGTTCTCGGCCCTGAAGCATCCTGCCCCGAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp TGCCCAGGCTGTCACAGCCTTGCAGTGCATGGTGGGTTCCGTGGCCAACTTGCCGCGTCCATGTCCTGGTaGTCGTCTGGGGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: CPGCHSLAVHGGFRGQLAASMSW*SSGASG
Trigger: GCCCGAGGCCCCAGACGAGCACCAGGACATGGACGC...GGCAAGTTGGCCACGGAACCCACCATGCACTGCAAGGCTGTGACAGCCTGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp CTGACCCCTGGACTGGCTCCCATCTCGGGAATGACGCCTGCCGTGGGAATCGTGAGGGCCTCCCGGGTCTaGGTCCATGTCCTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: LTPGLAPISGMTPAVGIVRASRV*VHVLVL
Trigger: GAGCACCAGGACATGGACGCAGACCCGGGAGGCCCT...CACGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAGCCAGTCCAGGGGTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp AGGAGGCTCTGCAGTCCCGGTGGGGTCATCTTGCCTCTCCGGACTGCTCCCTCTGGCTCGGAGCTCCTCTaGCCACATCGCCTCACTGGG +
Preference number: 4 (lower is better)
Translates to: RRLCSPGGVILPLRTAPSGSELL*PHRLTG
Trigger: CCCAGTGAGGCGATGTGGGCAGAGGAGCTCCGAGCC...AGAGGGAGCAGTCCGGAGAGGCAAGATGACCCCACCGGGACTGCAGAGCCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp CCCTGGACTGGCTCCCATCTCGGGAATGACGCCTGCCGTGGGAATCGTGGAGAGCTGCCCCACGACAGCTaGGTCTGCAAGCGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: PWTGSHLGNDACRGNRGELPHDS*VCKRQL
Trigger: GAGCTGGCGCTTGCAGACGCAGCTGTCGTGGGGCAG...CTCTCCACGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAGCCAGTCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR GCA 90 bp GGCCTCTGGTTTGGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTGGCAGCAGGTTCCGTGGCCAACTTaGCAGGGGACAGGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: GLWFGQLRLLGMATPWQQVPWPT*QGTGLL
Trigger: CAACAGGCCTGTCCCCTGGCAAGTTGGCCACGGAAC...CTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp TGGTTTGGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTGGCAGCAGGCGGCCAGGCTGTCACAGCCTTaGAGTGCATGGTGGGTTCCG +
Preference number: 4 (lower is better)
Translates to: WFGQLRLLGMATPWQQAARLSQP*SAWWVP
Trigger: CGGAACCCACCATGCACTGCAAGGCTGTGACAGCCT...GGCCGCCTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp GGCCTCTGGTTTGGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTGGCAGCAGGAGAGCTTCCCCTTCTaGAGGGGGCCTGATCAGAGG +
Preference number: 4 (lower is better)
Translates to: GLWFGQLRLLGMATPWQQESFPF*RGPDQR
Trigger: CCTCTGATCAGGCCCCCTGCAGAAGGGGAAGCTCTC...CTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCAGAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp TGGTTTGGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTGGCAGCAGGCGGCCCCCAGCAACGCGAGCTaGCGTCTGTCTTCTAAGGTC +
Preference number: 4 (lower is better)
Translates to: WFGQLRLLGMATPWQQAAPSNAS*RLSSKV
Trigger: GACCTTAGAAGACAGACGGCAGCTCGCGTTGCTGGG...GGCCGCCTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp CCTGTCCAGAAGAGATTGGTGTGGGTTGACCTGGCCTATGCGGGGCAGCTCAGTGAGCTGCTGCCGGGCTaGACGCTCCGCGGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: PVQKRLVWVDLAYAGQLSELLPG*TLRGQR
Trigger: ACGCTGGCCGCGGAGCGTGCAGCCCGGCAGCAGCTC...ACTGAGCTGCCCCGCATAGGCCAGGTCAACCCACACCAATCTCTTCTGGACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp CCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACCGTGCTGAGGCTGCCCCGCTGAGCTaGTGCCGGGCTGCACGCTCC +
Preference number: 4 (lower is better)
Translates to: PQTCPGSKTAAFTLHRAEAAPLS*CRAARS
Trigger: GGAGCGTGCAGCCCGGCAGCAGCTCAGCGGGGCAGC...CTCAGCACGGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp TGGAAAGCCCTAGGAAGGCTGCGTGCTCTGCAAACCCAGGGGTGCTGTGGCCGTGTCCTGGTGCTCGTCTaGGGCCTCGGGCTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: WKALGRLRALQTQGCCGRVLVLV*GLGLGW
Trigger: CCAACCCAGCCCGAGGCCCCAGACGAGCACCAGGAC...ACGGCCACAGCACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGGGCTTTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp TCTGATTCGCCTCATACCCGCTTAGGGGTGCCCAGAGCAGGGCATGGCATCATGGAACTCGGGGCCTCCTaGGCTCCCCCGCTGCGCCGT +
Preference number: 4 (lower is better)
Translates to: SDSPHTRLGVPRAGHGIMELGAS*APPLRR
Trigger: ACGGCGCAGCGGGGGAGCCCAGGAGGCCCCGAGTTC...CATGATGCCATGCCCTGCTCTGGGCACCCCTAAGCGGGTATGAGGCGAATCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp TGCCCAGGCTGTCACAGCCTTGCAGTGCATGGTGGGTTCCGTGGCCAACTTGCCGGGCCGGAGAGGATCTaGGCTGTCCCACTGCGCCAG +
Preference number: 4 (lower is better)
Translates to: CPGCHSLAVHGGFRGQLAGPERI*AVPLRQ
Trigger: CTGGCGCAGTGGGACAGCCCAGATCCTCTCCGGCCC...GGCAAGTTGGCCACGGAACCCACCATGCACTGCAAGGCTGTGACAGCCTGGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp CCTGGACTGGCTCCCATCTCGGGAATGACGCCTGCCGTGGGAATCGTGGAGAGGATGATGCGGTGGCCCTaGGTTATGGCGCGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: PGLAPISGMTPAVGIVERMMRWP*VMARLR
Trigger: CCGCAGCCGCGCCATAACCCAGGGCCACCGCATCAT...CCTCTCCACGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAGCCAGTCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp GGAAGTGCCTGTGTGGATGTGAAGCCACCTTGGGTGGGCGGCTCGGAGCTCCTCAACCCAGGGGTGCTGTaGCCGTACAGCAGGGGCGTC +
Preference number: 4 (lower is better)
Translates to: GSACVDVKPPWVGGSELLNPGVL*PYSRGV
Trigger: GACGCCCCTGCTGTACGGCCACAGCACCCCTGGGTT...GAGGAGCTCCGAGCCGCCCACCCAAGGTGGCTTCACATCCACACAGGCACTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp AGCCCTAGGAAGGCTGCGTGCTCTGCAAACCCAGGGGTGCTGTGGCCGTACAGCTCCGGTTGCTGGGGATaGCCACACCCTGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SPRKAACSANPGVLWPYSSGCWG*PHPGSR
Trigger: CCTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGA...GCTGTACGGCCACAGCACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CCA 90 bp CCTCGCCAGGTGGAAAGCCCTAGGAAGGCTGCGTGCTCTGCAAACCCAGGGGTGGCGAGGCCTCTGGTTTaGCCAGCTCCGGTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: PRQVESPRKAACSANPGVARPLV*PAPVAG
Trigger: CCCAGCAACCGGAGCTGGCCAAACCAGAGGCCTCGC...CACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGGGCTTTCCACCTGGCGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CCA 90 bp CCTGGACTGGCTCCCATCTCGGGAATGACGCCTGCCGTGGGAATCGTGGAGAGGGCGGAGCGAGGCCTCTaGTTTGGCCAGCTCCGGTTG +
Preference number: 4 (lower is better)
Translates to: PGLAPISGMTPAVGIVERAERGL*FGQLRL
Trigger: CAACCGGAGCTGGCCAAACCAGAGGCCTCGCTCCGC...CCTCTCCACGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAGCCAGTCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CCA 90 bp CCCTGGACTGGCTCCCATCTCGGGAATGACGCCTGCCGTGGGAATCGTGGAGAGACGTGTGCCCAGCGCTaGCTCCTGCTGACCCCTGGA +
Preference number: 4 (lower is better)
Translates to: PWTGSHLGNDACRGNRGETCAQR*LLLTPG
Trigger: TCCAGGGGTCAGCAGGAGCCAGCGCTGGGCACACGT...CTCTCCACGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAGCCAGTCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CCA 90 bp GCCAGGTGGAAAGCCCTAGGAAGGCTGCGTGCTCTGCAAACCCAGGGGTGCTGTCACCCAGGATGCCGCTaGCCTCAGCCAGGGCACGTG +
Preference number: 4 (lower is better)
Translates to: ARWKALGRLRALQTQGCCHPGCR*PQPGHV
Trigger: CACGTGCCCTGGCTGAGGCCAGCGGCATCCTGGGTG...ACAGCACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGGGCTTTCCACCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp GGAAGTGCCTGTGTGGATGTGAAGCCACCTTGGGTGGGCGGCTCGGAGCTCCTCGGGCAAGTCTGCCCTTaGCCCAGGGGTGCCACTTGC +
Preference number: 4 (lower is better)
Translates to: GSACVDVKPPWVGGSELLGQVCP*PRGATC
Trigger: GCAAGTGGCACCCCTGGGCCAAGGGCAGACTTGCCC...GAGGAGCTCCGAGCCGCCCACCCAAGGTGGCTTCACATCCACACAGGCACTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp CCCTGGACTGGCTCCCATCTCGGGAATGACGCCTGCCGTGGGAATCGTGGAGAGGGGCAAGTCTGCCCTTaGCCCAGGGGTGCCACTTGC +
Preference number: 4 (lower is better)
Translates to: PWTGSHLGNDACRGNRGEGQVCP*PRGATC
Trigger: GCAAGTGGCACCCCTGGGCCAAGGGCAGACTTGCCC...CTCTCCACGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAGCCAGTCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp CCCCAACCCCAGGTGTCTCCGTCCACTCTTGGTCCAGGTTACGTCTGGGCCAGGCAAGGAGCCCACAGGTaGAGGGCGCAGGCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: PQPQVSPSTLGPGYVWARQGAHR*RAQAWQ
Trigger: CTGCCAAGCCTGCGCCCTCCACCTGTGGGCTCCTTG...CCTGGCCCAGACGTAACCTGGACCAAGAGTGGACGGAGACACCTGGGGTTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp TGGTTTGGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTGGCAGCAGGCGGCCTGGGCAGGCGACATCTaGTGGCCCTGGAACTTTGCA +
Preference number: 4 (lower is better)
Translates to: WFGQLRLLGMATPWQQAAWAGDI*WPWNFA
Trigger: TGCAAAGTTCCAGGGCCACCAGATGTCGCCTGCCCA...GGCCGCCTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp TGGAAAGCCCTAGGAAGGCTGCGTGCTCTGCAAACCCAGGGGTGCTGTGGCCGTCAGCAGAGGCAGGGCTaGAAGCAGGAGCTGCCCCGC +
Preference number: 4 (lower is better)
Translates to: WKALGRLRALQTQGCCGRQQRQG*KQELPR
Trigger: GCGGGGCAGCTCCTGCTTCCAGCCCTGCCTCTGCTG...ACGGCCACAGCACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGGGCTTTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR TCA 90 bp GGAAGTGCCTGTGTGGATGTGAAGCCACCTTGGGTGGGCGGCTCGGAGCTCCTCAGGAACTCCAGGGACTaGGGGGCTGCTGCATCCAGC +
Preference number: 4 (lower is better)
Translates to: GSACVDVKPPWVGGSELLRNSRD*GAAASS
Trigger: GCTGGATGCAGCAGCCCCTCAGTCCCTGGAGTTCCT...GAGGAGCTCCGAGCCGCCCACCCAAGGTGGCTTCACATCCACACAGGCACTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253928.14
CDS-3UTR TCA 90 bp CAGGTGGAAAGCCCTAGGAAGGCTGCGTGCTCTGCAAACCCAGGGGTGCTGTGGGGCAGTGACCACGCATaGCAGTCACCCGTCGGCCCT +
Preference number: 4 (lower is better)
Translates to: QVESPRKAACSANPGVLWGSDHA*QSPVGP
Trigger: AGGGCCGACGGGTGACTGTCATGCGTGGTCACTGCC...CCACAGCACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGGGCTTTCCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR TCA 90 bp ACAGAAAGGAAAGTGTGGAGTGCGGAGCGAGGCCTCTGGTTTGGCCAGCTCCGGCACTTTGCACCGTGCTaGGCAGAGCGGGGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: TERKVWSAERGLWFGQLRHFAPC*AERGLA
Trigger: GGCGAGGCCCCGCTCTGCTCAGCACGGTGCAAAGTG...CCGGAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTTTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR GCA 90 bp CAGCCTCGGGGCAGGATGCTTCAGGGCCGAGAACAGTGCCCAAAGCGCAGCCACGGGGACCCGGACCCCTaGGGTAGAGCAAACTATCCA +
Preference number: 4 (lower is better)
Translates to: QPRGRMLQGREQCPKRSHGDPDP*GRANYP
Trigger: TGGATAGTTTGCTCTACCGCAGGGGTCCGGGTCCCC...GTGGCTGCGCTTTGGGCACTGTTCTCGGCCCTGAAGCATCCTGCCCCGAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp GCGTCCGTGTCCAGGCAGCTTTGTCATGTCTTCCAAAGGTCAGGAAGGCGCCACCCTGGGCTCCCCCGCTaGGCCGTGTTGGGGCGTTTC +
Preference number: 4 (lower is better)
Translates to: ASVSRQLCHVFQRSGRRHPGLPR*AVLGRF
Trigger: GAAACGCCCCAACACGGCGCAGCGGGGGAGCCCAGG...GTGGCGCCTTCCTGACCTTTGGAAGACATGACAAAGCTGCCTGGACACGGACGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp CTCTGGTTTGGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTGGCAGCAGGCGGAAGGACCTCGCGGCTaGGGACAGGTCCTTGTTAGT +
Preference number: 4 (lower is better)
Translates to: LWFGQLRLLGMATPWQQAEGPRG*GQVLVS
Trigger: ACTAACAAGGACCTGTCCGCAGCCGCGAGGTCCTTC...CGCCTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp GTCCAGCTGGGGGCAGTTAGGTCAGCCTCGGGGCAGGATGCTTCAGGGCCGAGAGAGAGCTTCCCCTTCTaGAGGGGGCCTGATCAGAGG +
Preference number: 4 (lower is better)
Translates to: VQLGAVRSASGQDASGPRESFPF*RGPDQR
Trigger: CCTCTGATCAGGCCCCCTGCAGAAGGGGAAGCTCTC...TCTCGGCCCTGAAGCATCCTGCCCCGAGGCTGACCTAACTGCCCCCAGCTGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp CCCTGGACTGGCTCCCATCTCGGGAATGACGCCTGCCGTGGGAATCGTGGAGAGACCATGGCGGGAAGATaGTGGCCGTGGAGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: PWTGSHLGNDACRGNRGETMAGR*WPWRPH
Trigger: ATGGGGCCTCCACGGCCAGCATCTTCCCGCCATGGT...CTCTCCACGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAGCCAGTCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp TGGGGGCAGTTAGGTCAGCCTCGGGGCAGGATGCTTCAGGGCCGAGAACAGTGCACCATGGCGGGAAGATaGTGGCCGTGGAGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: WGQLGQPRGRMLQGREQCTMAGR*WPWRPH
Trigger: ATGGGGCCTCCACGGCCAGCATCTTCCCGCCATGGT...GCACTGTTCTCGGCCCTGAAGCATCCTGCCCCGAGGCTGACCTAACTGCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp CTCTGGTTTGGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTGGCAGCAGGCGCCCAGCAACGCGAGCTaGCGTCTGTCTTCTAAGGTC +
Preference number: 4 (lower is better)
Translates to: LWFGQLRLLGMATPWQQAPSNAS*RLSSKV
Trigger: GACCTTAGAAGACAGACGGCAGCTCGCGTTGCTGGG...CGCCTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp TTAGTAAGGAGGAGGCTCTGCAGTCCCGGTGGGGTCATCTTGCCTCTCCGGACTGCACCAGCCCAGGAGTaGGCTCGGGCTCCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: LVRRRLCSPGGVILPLRTAPAQE*ARAPQG
Trigger: GCCCTGAGGAGCCCGAGCCCACTCCTGGGCTGGTGC...AGTCCGGAGAGGCAAGATGACCCCACCGGGACTGCAGAGCCTCCTCCTTACTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp AGCCCTAGGAAGGCTGCGTGCTCTGCAAACCCAGGGGTGCTGTGGCCGTACAGCCCCTCCATATCGGGCTaGTGGCAGTGCCCACGCATC +
Preference number: 4 (lower is better)
Translates to: SPRKAACSANPGVLWPYSPSISG*WQCPRI
Trigger: GATGCGTGGGCACTGCCACCAGCCCGATATGGAGGG...GCTGTACGGCCACAGCACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp ACCCAGCACCTGTCCAGAAGAGATTGGTGTGGGTTGACCTGGCCTATGCGGGGCGTCCTGGTGCTCGTCTaGGGCCTCGGGCTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: TQHLSRRDWCGLTWPMRGVLVLV*GLGLGW
Trigger: CCAACCCAGCCCGAGGCCCCAGACGAGCACCAGGAC...GCCCCGCATAGGCCAGGTCAACCCACACCAATCTCTTCTGGACAGGTGCTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp GCGTCCGTGTCCAGGCAGCTTTGTCATGTCTTCCAAAGGTCAGGAAGGCGCCACCCCGCTGCGCCGTGTTaGGGCGTTTCTCCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: ASVSRQLCHVFQRSGRRHPAAPC*GVSPAA
Trigger: GGCAGCGGGAGAAACGCCCCAACACGGCGCAGCGGG...GTGGCGCCTTCCTGACCTTTGGAAGACATGACAAAGCTGCCTGGACACGGACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp CCTGGACTGGCTCCCATCTCGGGAATGACGCCTGCCGTGGGAATCGTGGAGAGGGATGTGAAGCCACCTTaGGTGGGCGGCTCGGAGCTC +
Preference number: 4 (lower is better)
Translates to: PGLAPISGMTPAVGIVERDVKPP*VGGSEL
Trigger: GAGCTCCGAGCCGCCCACCCAAGGTGGCTTCACATC...CCTCTCCACGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAGCCAGTCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp TGGAAAGCCCTAGGAAGGCTGCGTGCTCTGCAAACCCAGGGGTGCTGTGGCCGTAACCCAGGGGTGCTGTaGCCGTACAGCAGGGGCGTC +
Preference number: 4 (lower is better)
Translates to: WKALGRLRALQTQGCCGRNPGVL*PYSRGV
Trigger: GACGCCCCTGCTGTACGGCCACAGCACCCCTGGGTT...ACGGCCACAGCACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGGGCTTTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CCA 90 bp TGCCCAGGCTGTCACAGCCTTGCAGTGCATGGTGGGTTCCGTGGCCAACTTGCCCGGGGCCTCGCCAGGTaGAAAGCCCTAGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: CPGCHSLAVHGGFRGQLARGLAR*KALGRL
Trigger: CAGCCTTCCTAGGGCTTTCCACCTGGCGAGGCCCCG...GGCAAGTTGGCCACGGAACCCACCATGCACTGCAAGGCTGTGACAGCCTGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp GCACAGAAAGGAAAGTGTGGAGTGCGGAGCGAGGCCTCTGGTTTGGCCAGCTCCGCCAGCTCCGGTTGCTaGGGATGGCCACACCCTGGC +
Preference number: 4 (lower is better)
Translates to: AQKGKCGVRSEASGLASSASSGC*GWPHPG
Trigger: GCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGC...GGAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTTTCTGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CCA 90 bp CAGGTGGAAAGCCCTAGGAAGGCTGCGTGCTCTGCAAACCCAGGGGTGCTGTGGGCGGAGCGAGGCCTCTaGTTTGGCCAGCTCCGGTTG +
Preference number: 4 (lower is better)
Translates to: QVESPRKAACSANPGVLWAERGL*FGQLRL
Trigger: CAACCGGAGCTGGCCAAACCAGAGGCCTCGCTCCGC...CCACAGCACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGGGCTTTCCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CCA 90 bp CAGGTGGAAAGCCCTAGGAAGGCTGCGTGCTCTGCAAACCCAGGGGTGCTGTGGACGTGTGCCCAGCGCTaGCTCCTGCTGACCCCTGGA +
Preference number: 4 (lower is better)
Translates to: QVESPRKAACSANPGVLWTCAQR*LLLTPG
Trigger: TCCAGGGGTCAGCAGGAGCCAGCGCTGGGCACACGT...CCACAGCACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGGGCTTTCCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CCA 90 bp GCACAGAAAGGAAAGTGTGGAGTGCGGAGCGAGGCCTCTGGTTTGGCCAGCTCCCACCCAGGATGCCGCTaGCCTCAGCCAGGGCACGTG +
Preference number: 4 (lower is better)
Translates to: AQKGKCGVRSEASGLASSHPGCR*PQPGHV
Trigger: CACGTGCCCTGGCTGAGGCCAGCGGCATCCTGGGTG...GGAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTTTCTGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp CAGGCAGCTTTGTCATGTCTTCCAAAGGTCAGGAAGGCGCCACCGCCCTGCCCCTGCCCAGGATGGACCTaGGCCACCCAGGATGCCGCT +
Preference number: 4 (lower is better)
Translates to: QAALSCLPKVRKAPPPCPCPGWT*ATQDAA
Trigger: AGCGGCATCCTGGGTGGCCCAGGTCCATCCTGGGCA...GGGGCAGGGCGGTGGCGCCTTCCTGACCTTTGGAAGACATGACAAAGCTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp AGTGGCTGTCAGGCCCTTGTCATGGCTGAGTGGCCACCAGGGTGCGGGTTGGTGGCTCTGCAGTCCCGGTaGGGTCATCTTGCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: SGCQALVMAEWPPGCGLVALQSR*GHLASP
Trigger: CGGAGAGGCAAGATGACCCCACCGGGACTGCAGAGC...CACCAACCCGCACCCTGGTGGCCACTCAGCCATGACAAGGGCCTGACAGCCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp AGCCCTAGGAAGGCTGCGTGCTCTGCAAACCCAGGGGTGCTGTGGCCGTACAGCGCTCTGCAGTCCCGGTaGGGTCATCTTGCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: SPRKAACSANPGVLWPYSALQSR*GHLASP
Trigger: CGGAGAGGCAAGATGACCCCACCGGGACTGCAGAGC...GCTGTACGGCCACAGCACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp CGCCCTGCCCCACGACAGCTGCGTCTGCAAGCGCCAGCTCTGAGCACTGTTCTCTCTCCCCCTGGGCACTaGCATGGAGATGTGACGGAG +
Preference number: 4 (lower is better)
Translates to: RPAPRQLRLQAPALSTVLSPPGH*HGDVTE
Trigger: CTCCGTCACATCTCCATGCCAGTGCCCAGGGGGAGA...GAGAACAGTGCTCAGAGCTGGCGCTTGCAGACGCAGCTGTCGTGGGGCAGGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp CCAGGGGTGCTGTGGCCGTACAGCAGGGGCGTCCGTGTCCAGGCAGCTTTGTCACAAAGGATGGACGGGTaGGCAAGTCTGCCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: PGVLWPYSRGVRVQAALSQRMDG*ASLPLA
Trigger: GGCCAAGGGCAGACTTGCCCACCCGTCCATCCTTTG...TGACAAAGCTGCCTGGACACGGACGCCCCTGCTGTACGGCCACAGCACCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp CTGACAGAAGGGGACACGCCTTTGCTGCCCAGGATGGACCTGGGCCACCCAGGAGGAAGATGCTGGCCGTaGAGGCCCCATCACAGAGGC +
Preference number: 4 (lower is better)
Translates to: LTEGDTPLLPRMDLGHPGGRCWP*RPHHRG
Trigger: GCCTCTGTGATGGGGCCTCCACGGCCAGCATCTTCC...TCCTGGGTGGCCCAGGTCCATCCTGGGCAGCAAAGGCGTGTCCCCTTCTGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp GACCCCTGGACTGGCTCCCATCTCGGGAATGACGCCTGCCGTGGGAATCGTGGAATGGCGGGAAGATGCTaGCCGTGGAGGCCCCATCAC +
Preference number: 4 (lower is better)
Translates to: DPWTGSHLGNDACRGNRGMAGRC*PWRPHH
Trigger: GTGATGGGGCCTCCACGGCCAGCATCTTCCCGCCAT...TCCACGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAGCCAGTCCAGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CAA 72 bp GTGGATGGGAAGTGCCTGTGTGGATGTGAAGCCACCTaGGGTGGGCGGCTCGGAGCTCCTCTGCCCACATCG +
Preference number: 4 (lower is better)
Translates to: VDGKCLCGCEAT*GGRLGAPLPTS
Trigger: CGATGTGGGCAGAGGAGCTCCGAGCCGCCCACCCAAGGTGGCTTCACATCCACACAGGCACTTCCCATCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR CAA 72 bp GTGGGAGTGAAGGACCTCGCGGCTGCGGACAGGTCCTaGTTAGTAAGGAGGAGGCTCTGCAGTCCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: VGVKDLAAADRS*LVRRRLCSPGG
Trigger: CCCACCGGGACTGCAGAGCCTCCTCCTTACTAACAAGGACCTGTCCGCAGCCGCGAGGTCCTTCACTCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR TCA 90 bp GACCCCTGGACTGGCTCCCATCTCGGGAATGACGCCTGCCGTGGGAATCGTGGATCCTGGGAGACCTCCTaGGGAGACGCGAAGACCATC +
Preference number: 4 (lower is better)
Translates to: DPWTGSHLGNDACRGNRGSWETS*GDAKTI
Trigger: GATGGTCTTCGCGTCTCCTCAGGAGGTCTCCCAGGA...TCCACGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAGCCAGTCCAGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR TCA 90 bp GGACCATCTTTCAGCAAGTACCTTCCTCGGGCATGGCTGCCTCCTGTGGGCGTACACTTTGCACCGTGCTaGGCAGAGCGGGGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: GPSFSKYLPRAWLPPVGVHFAPC*AERGLA
Trigger: GGCGAGGCCCCGCTCTGCTCAGCACGGTGCAAAGTG...TACGCCCACAGGAGGCAGCCATGCCCGAGGAAGGTACTTGCTGAAAGATGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR TCA 90 bp CTCTGGTTTGGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTGGCAGCAGGCGCGGGGCAGCTCAGTTTaGAGCAGGAACTTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: LWFGQLRLLGMATPWQQARGSSV*SRNFPK
Trigger: TTTGGGGAAGTTCCTGCTTCAAACTGAGCTGCCCCG...CGCCTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR TCA 90 bp GGCCTCTGGTTTGGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTGGCAGCAGCTCTGTGAAGCTGTCTaGCAGAAGGGGACACGCCTT +
Preference number: 4 (lower is better)
Translates to: GLWFGQLRLLGMATPWQQLCEAV*QKGTRL
Trigger: AAGGCGTGTCCCCTTCTGTCAGACAGCTTCACAGAG...CTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR TCA 90 bp GGCCTCTGGTTTGGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTGGCAGCAGAGCAGCACAGGAGCATaGCCCAAAAGCTGCAGGATC +
Preference number: 4 (lower is better)
Translates to: GLWFGQLRLLGMATPWQQSSTGA*PKSCRI
Trigger: GATCCTGCAGCTTTTGGGTCATGCTCCTGTGCTGCT...CTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344592.9
CDS-3UTR GCA 90 bp CCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACCGTGCTGAGCCGTCCTGCCCAGCCTaGAGCGTCTCCACGGCCTTC +
Preference number: 4 (lower is better)
Translates to: PQTCPGSKTAAFTLHRAEPSCPA*SVSTAF
Trigger: GAAGGCCGTGGAGACGCTGCAGGCTGGGCAGGACGG...CTCAGCACGGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp CCTGGCCTATGCGGGGCAGCTCAGTTTGAAGCAGGAACTTCCCCAAACGTGCCCAGGGCCTCCCGGGTCTaGGTCCATGTCCTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: PGLCGAAQFEAGTSPNVPRASRV*VHVLVL
Trigger: GAGCACCAGGACATGGACGCAGACCCGGGAGGCCCT...GGGCACGTTTGGGGAAGTTCCTGCTTCAAACTGAGCTGCCCCGCATAGGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp GTGGAAAGCCCTAGGAAGGCTGCGTGCTCTGCAAACCCAGGGGTGCTGTGGCCGGAAGGCTGCGTGCTCTaGAAACCCAGGGGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: VESPRKAACSANPGVLWPEGCVL*KPRGAV
Trigger: CACAGCACCCCTGGGTTTGCAGAGCACGCAGCCTTC...CGGCCACAGCACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGGGCTTTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR GCA 90 bp CCCCAACCCCAGGTGTCTCCGTCCACTCTTGGTCCAGGTTACGTCTGGGCCAGGGAAGGCTGCGTGCTCTaGAAACCCAGGGGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: PQPQVSPSTLGPGYVWAREGCVL*KPRGAV
Trigger: CACAGCACCCCTGGGTTTGCAGAGCACGCAGCCTTC...CCTGGCCCAGACGTAACCTGGACCAAGAGTGGACGGAGACACCTGGGGTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp GCTCCAAGACAGCAGCATTCACTTTGCACCGTGCTGAGCAGAGCGGGGCCTCGCTTGGCCAGCTCCGGTTaGTGGGGATGGCCACACCCT +
Preference number: 4 (lower is better)
Translates to: APRQQHSLCTVLSRAGPRLASSG*WGWPHP
Trigger: AGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAA...GCGAGGCCCCGCTCTGCTCAGCACGGTGCAAAGTGAATGCTGCTGTCTTGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR GCA 90 bp CTCTGGTTTGGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTGGCAGCAGGCGAAGGAAAGTGTGGAGTaGGGAGCGAGGCCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: LWFGQLRLLGMATPWQQAKESVE*GARPLV
Trigger: AACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTT...CGCCTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR GCA 90 bp GACCCCTGGACTGGCTCCCATCTCGGGAATGACGCCTGCCGTGGGAATCGTGGACTCGGGAATGACGCCTaGCGTGGGAATCGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: DPWTGSHLGNDACRGNRGLGNDA*RGNRGE
Trigger: CTCTCCACGATTCCCACGGCAGGCGTCATTCCCGAG...TCCACGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAGCCAGTCCAGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR GCA 90 bp GGATTTATTGGGGGAACCGTACAAGCAGAGGAGAAGCAGGGGTGCCCAGGCTGTCTGGGCCACCCAGGATaGCGCTGGCCTCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GFIGGTVQAEEKQGCPGCLGHPG*RWPQPG
Trigger: CCCTGGCTGAGGCCAGCGGCATCCTGGGTGGCCCAG...ACAGCCTGGGCACCCCTGCTTCTCCTCTGCTTGTACGGTTCCCCCAATAAATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp GGAAGTGCCTGTGTGGATGTGAAGCCACCTTGGGTGGGCGGCTCGGAGCTCCTCAAGGGGACACGCCTTTaGTGCCCAGGATGGACCTGG +
Preference number: 4 (lower is better)
Translates to: GSACVDVKPPWVGGSELLKGTRL*CPGWTW
Trigger: CCAGGTCCATCCTGGGCAGCAAAGGCGTGTCCCCTT...GAGGAGCTCCGAGCCGCCCACCCAAGGTGGCTTCACATCCACACAGGCACTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp GTGGAAAGCCCTAGGAAGGCTGCGTGCTCTGCAAACCCAGGGGTGCTGTGGCCGGTAAGGAGGAGGCTCTaGAGTCCCGGTGGGGTCATC +
Preference number: 4 (lower is better)
Translates to: VESPRKAACSANPGVLWPVRRRL*SPGGVI
Trigger: GATGACCCCACCGGGACTGCAGAGCCTCCTCCTTAC...CGGCCACAGCACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGGGCTTTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp GGAAGTGCCTGTGTGGATGTGAAGCCACCTTGGGTGGGCGGCTCGGAGCTCCTCGTTCCGTGGCCAACTTaGCAGGGGACAGGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: GSACVDVKPPWVGGSELLVPWPT*QGTGLL
Trigger: CAACAGGCCTGTCCCCTGGCAAGTTGGCCACGGAAC...GAGGAGCTCCGAGCCGCCCACCCAAGGTGGCTTCACATCCACACAGGCACTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp GTGGATGGGAAGTGCCTGTGTGGATGTGAAGCCACCTTGGGTGGGCGGCTCGGACCCTTGGCCCAGGGGTaGCACTTGCCCAGGCTTATG +
Preference number: 4 (lower is better)
Translates to: VDGKCLCGCEATLGGRLGPLAQG*HLPRLM
Trigger: CATAAGCCTGGGCAAGTGGCACCCCTGGGCCAAGGG...TCCGAGCCGCCCACCCAAGGTGGCTTCACATCCACACAGGCACTTCCCATCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp CCTCGCCAGGTGGAAAGCCCTAGGAAGGCTGCGTGCTCTGCAAACCCAGGGGTGCAGGGCCGAGAACAGTaGCCAAAGCGCAGCCACTGT +
Preference number: 4 (lower is better)
Translates to: PRQVESPRKAACSANPGVQGREQ*PKRSHC
Trigger: ACAGTGGCTGCGCTTTGGGCACTGTTCTCGGCCCTG...CACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGGGCTTTCCACCTGGCGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp AGGAGGCTCTGCAGTCCCGGTGGGGTCATCTTGCCTCTCCGGACTGCTCCCTCTTTCCTCGGGCATGGCTaGCTCCTGTGGGCGTACACA +
Preference number: 4 (lower is better)
Translates to: RRLCSPGGVILPLRTAPSFLGHG*LLWAYT
Trigger: TGTGTACGCCCACAGGAGGCAGCCATGCCCGAGGAA...AGAGGGAGCAGTCCGGAGAGGCAAGATGACCCCACCGGGACTGCAGAGCCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp AGGGCCGAGAACAGTGCCCAAAGCGCAGCCACTGTGTTGTGTGTCCTCTGCCATGTCCTGGTGCTCGTCTaGGGCCTCGGGCTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: RAENSAQSAATVLCVLCHVLVLV*GLGLGW
Trigger: CCAACCCAGCCCGAGGCCCCAGACGAGCACCAGGAC...ATGGCAGAGGACACACAACACAGTGGCTGCGCTTTGGGCACTGTTCTCGGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp CTGACCCCTGGACTGGCTCCCATCTCGGGAATGACGCCTGCCGTGGGAATCGTGATGACCATGATGCGGTaGCCCTGGGTTATGGCGCGG +
Preference number: 4 (lower is better)
Translates to: LTPGLAPISGMTPAVGIVMTMMR*PWVMAR
Trigger: CCGCGCCATAACCCAGGGCCACCGCATCATGGTCAT...CACGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAGCCAGTCCAGGGGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp TGGAAAGCCCTAGGAAGGCTGCGTGCTCTGCAAACCCAGGGGTGCTGTGGCCGTGATGTGAAGCCACCTTaGGTGGGCGGCTCGGAGCTC +
Preference number: 4 (lower is better)
Translates to: WKALGRLRALQTQGCCGRDVKPP*VGGSEL
Trigger: GAGCTCCGAGCCGCCCACCCAAGGTGGCTTCACATC...ACGGCCACAGCACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGGGCTTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp CCTGGACTGGCTCCCATCTCGGGAATGACGCCTGCCGTGGGAATCGTGGAGAGGTGGTGTGGGTTGACCTaGCCTATGCGGGGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: PGLAPISGMTPAVGIVERWCGLT*PMRGSS
Trigger: TGAGCTGCCCCGCATAGGCCAGGTCAACCCACACCA...CCTCTCCACGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAGCCAGTCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CCA 90 bp ACCCAGCACCTGTCCAGAAGAGATTGGTGTGGGTTGACCTGGCCTATGCGGGGCGCGGAGCGAGGCCTCTaGTTTGGCCAGCTCCGGTTG +
Preference number: 4 (lower is better)
Translates to: TQHLSRRDWCGLTWPMRGAERGL*FGQLRL
Trigger: CAACCGGAGCTGGCCAAACCAGAGGCCTCGCTCCGC...GCCCCGCATAGGCCAGGTCAACCCACACCAATCTCTTCTGGACAGGTGCTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CCA 90 bp CCTCGCCAGGTGGAAAGCCCTAGGAAGGCTGCGTGCTCTGCAAACCCAGGGGTGGCATGGTGGGTTCCGTaGCCAACTTGCCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: PRQVESPRKAACSANPGVAWWVP*PTCQGT
Trigger: TGTCCCCTGGCAAGTTGGCCACGGAACCCACCATGC...CACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGGGCTTTCCACCTGGCGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp CTGACAGAAGGGGACACGCCTTTGCTGCCCAGGATGGACCTGGGCCACCCAGGAGCATGGTGGGTTCCGTaGCCAACTTGCCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: LTEGDTPLLPRMDLGHPGAWWVP*PTCQGT
Trigger: TGTCCCCTGGCAAGTTGGCCACGGAACCCACCATGC...TCCTGGGTGGCCCAGGTCCATCCTGGGCAGCAAAGGCGTGTCCCCTTCTGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp GTCCAGCTGGGGGCAGTTAGGTCAGCCTCGGGGCAGGATGCTTCAGGGCCGAGACCTTGCAGTGCATGGTaGGTTCCGTGGCCAACTTGC +
Preference number: 4 (lower is better)
Translates to: VQLGAVRSASGQDASGPRPCSAW*VPWPTC
Trigger: GCAAGTTGGCCACGGAACCCACCATGCACTGCAAGG...TCTCGGCCCTGAAGCATCCTGCCCCGAGGCTGACCTAACTGCCCCCAGCTGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp GTGGATGGGAAGTGCCTGTGTGGATGTGAAGCCACCTTGGGTGGGCGGCTCGGAGGAGGGGTCTCCCCCTaGGCACTGGCATGGAGATGT +
Preference number: 4 (lower is better)
Translates to: VDGKCLCGCEATLGGRLGGGVSP*ALAWRC
Trigger: ACATCTCCATGCCAGTGCCCAGGGGGAGACCCCTCC...TCCGAGCCGCCCACCCAAGGTGGCTTCACATCCACACAGGCACTTCCCATCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp TGGAAAGCCCTAGGAAGGCTGCGTGCTCTGCAAACCCAGGGGTGCTGTGGCCGTGGAGGGGTCTCCCCCTaGGCACTGGCATGGAGATGT +
Preference number: 4 (lower is better)
Translates to: WKALGRLRALQTQGCCGRGGVSP*ALAWRC
Trigger: ACATCTCCATGCCAGTGCCCAGGGGGAGACCCCTCC...ACGGCCACAGCACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGGGCTTTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp CTGACAGAAGGGGACACGCCTTTGCTGCCCAGGATGGACCTGGGCCACCCAGGACAAAGGATGGACGGGTaGGCAAGTCTGCCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: LTEGDTPLLPRMDLGHPGQRMDG*ASLPLA
Trigger: GGCCAAGGGCAGACTTGCCCACCCGTCCATCCTTTG...TCCTGGGTGGCCCAGGTCCATCCTGGGCAGCAAAGGCGTGTCCCCTTCTGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp CCTCGCCAGGTGGAAAGCCCTAGGAAGGCTGCGTGCTCTGCAAACCCAGGGGTGGCCCAGAGCAGGGCATaGCATCATGTGACCATGGCG +
Preference number: 4 (lower is better)
Translates to: PRQVESPRKAACSANPGVAQSRA*HHVTMA
Trigger: CGCCATGGTCACATGATGCCATGCCCTGCTCTGGGC...CACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGGGCTTTCCACCTGGCGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR TCA 90 bp AGGGCCGAGAACAGTGCCCAAAGCGCAGCCACTGTGTTGTGTGTCCTCTGCCATTCGGGCGGGTGGCAGTaGCCACGCATGACAGTCACC +
Preference number: 4 (lower is better)
Translates to: RAENSAQSAATVLCVLCHSGGWQ*PRMTVT
Trigger: GGTGACTGTCATGCGTGGTCACTGCCACCCGCCCGA...ATGGCAGAGGACACACAACACAGTGGCTGCGCTTTGGGCACTGTTCTCGGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR TCA 90 bp CCGGTGGGGTCATCTTGCCTCTCCGGACTGCTCCCTCTGACTGGTGAAGCCACATCCTGGGAGACCTCCTaGGGAGACGCGAAGACCATC +
Preference number: 4 (lower is better)
Translates to: PVGSSCLSGLLPLTGEATSWETS*GDAKTI
Trigger: GATGGTCTTCGCGTCTCCTCAGGAGGTCTCCCAGGA...TGTGGCTTCACCAGTCAGAGGGAGCAGTCCGGAGAGGCAAGATGACCCCACCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR TCA 90 bp GCACAGAAAGGAAAGTGTGGAGTGCGGAGCGAGGCCTCTGGTTTGGCCAGCTCCTGCAAGCGCCAGCTCTaGGCACTGTTCTCCGCCGAC +
Preference number: 4 (lower is better)
Translates to: AQKGKCGVRSEASGLASSCKRQL*ALFSAD
Trigger: GTCGGCGGAGAACAGTGCTCAGAGCTGGCGCTTGCA...GGAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTTTCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR TCA 90 bp GCTCCAAGACAGCAGCATTCACTTTGCACCGTGCTGAGCAGAGCGGGGCCTCGCGAGATTGGTGTGGGTTaGCCTGGCCTATGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: APRQQHSLCTVLSRAGPREIGVG*PGLCGA
Trigger: TGCCCCGCATAGGCCAGGTCAACCCACACCAATCTC...GCGAGGCCCCGCTCTGCTCAGCACGGTGCAAAGTGAATGCTGCTGTCTTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR TCA 90 bp CAGCCTCGGGGCAGGATGCTTCAGGGCCGAGAACAGTGCCCAAAGCGCAGCCACGCAAGGGGAAGGCTCTaGAGCTCACTTAGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: QPRGRMLQGREQCPKRSHARGRL*SSLSGC
Trigger: ACAGCCACTAAGTGAGCTTCAGAGCCTTCCCCTTGC...GTGGCTGCGCTTTGGGCACTGTTCTCGGCCCTGAAGCATCCTGCCCCGAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp ACAGAAAGGAAAGTGTGGAGTGCGGAGCGAGGCCTCTGGTTTGGCCAGCTCCGGGGATCCTTCAGCCTCTaGCGCTGCAGCAGCGAGCGT +
Preference number: 4 (lower is better)
Translates to: TERKVWSAERGLWFGQLRGSFSL*RCSSER
Trigger: ACGCTCGCTGCTGCAGCGGCAGAGGCTGAAGGATCC...CCGGAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTTTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp ATGTGGTGCAAATGTCATACAGCAGGGTTTGTGGGCGAAGCACCAGCAGAGGCAGGCTCCTCAGGGCACTaGCACGGGCCCACCCCCTCC +
Preference number: 4 (lower is better)
Translates to: MWCKCHTAGFVGEAPAEAGSSGH*HGPTPS
Trigger: GGAGGGGGTGGGCCCGTGGCAGTGCCCTGAGGAGCC...TGCCTCTGCTGGTGCTTCGCCCACAAACCCTGCTGTATGACATTTGCACCACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp GTCCAGAAGAGATTGGTGTGGGTTGACCTGGCCTATGCGGGGCAGCTCAGTTTGCCTCCAGGGCCGGCTTaGTCAGCACCAGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: VQKRLVWVDLAYAGQLSLPPGPA*SAPAQE
Trigger: CTCCTGGGCTGGTGCTGAGCAAGCCGGCCCTGGAGG...CAAACTGAGCTGCCCCGCATAGGCCAGGTCAACCCACACCAATCTCTTCTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp GTACAGCAGGGGCGTCCGTGTCCAGGCAGCTTTGTCATGTCTTCCAAAGGTCAGCCTCCAGGGCCGGCTTaGTCAGCACCAGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: VQQGRPCPGSFVMSSKGQPPGPA*SAPAQE
Trigger: CTCCTGGGCTGGTGCTGAGCAAGCCGGCCCTGGAGG...CTGACCTTTGGAAGACATGACAAAGCTGCCTGGACACGGACGCCCCTGCTGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp CTGTCCAGAAGAGATTGGTGTGGGTTGACCTGGCCTATGCGGGGCAGCTCAGTTGCGTCCATGTCCTGGTaGTCGTCTGGGGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: LSRRDWCGLTWPMRGSSVASMSW*SSGASG
Trigger: GCCCGAGGCCCCAGACGAGCACCAGGACATGGACGC...AACTGAGCTGCCCCGCATAGGCCAGGTCAACCCACACCAATCTCTTCTGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp AGCACAGAAAGGAAAGTGTGGAGTGCGGAGCGAGGCCTCTGGTTTGGCCAGCTCAGGGCCTCCCGGGTCTaGGTCCATGTCCTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: STERKVWSAERGLWFGQLRASRV*VHVLVL
Trigger: GAGCACCAGGACATGGACGCAGACCCGGGAGGCCCT...GAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTTTCTGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp TTAGTAAGGAGGAGGCTCTGCAGTCCCGGTGGGGTCATCTTGCCTCTCCGGACTGGCTCGGAGCTCCTCTaGCCACATCGCCTCACTGGG +
Preference number: 4 (lower is better)
Translates to: LVRRRLCSPGGVILPLRTGSELL*PHRLTG
Trigger: CCCAGTGAGGCGATGTGGGCAGAGGAGCTCCGAGCC...AGTCCGGAGAGGCAAGATGACCCCACCGGGACTGCAGAGCCTCCTCCTTACTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp CCTGGCCTATGCGGGGCAGCTCAGTTTGAAGCAGGAACTTCCCCAAACGTGCCCCTGCAAACCCAGGGGTaGTGTGGCCGTACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: PGLCGAAQFEAGTSPNVPLQTQG*CGRTAG
Trigger: CCCTGCTGTACGGCCACAGCACCCCTGGGTTTGCAG...GGGCACGTTTGGGGAAGTTCCTGCTTCAAACTGAGCTGCCCCGCATAGGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR GCA 90 bp GCCAGGTGGAAAGCCCTAGGAAGGCTGCGTGCTCTGCAAACCCAGGGGTGCTGTGAAGGCTGCGTGCTCTaGAAACCCAGGGGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: ARWKALGRLRALQTQGCCEGCVL*KPRGAV
Trigger: CACAGCACCCCTGGGTTTGCAGAGCACGCAGCCTTC...ACAGCACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGGGCTTTCCACCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR GCA 90 bp GTGGATGGGAAGTGCCTGTGTGGATGTGAAGCCACCTTGGGTGGGCGGCTCGGACCTAGGAAGGCTGCGTaGTCTGCAAACCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: VDGKCLCGCEATLGGRLGPRKAA*SANPGV
Trigger: CACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGG...TCCGAGCCGCCCACCCAAGGTGGCTTCACATCCACACAGGCACTTCCCATCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp GCCAGGTGGAAAGCCCTAGGAAGGCTGCGTGCTCTGCAAACCCAGGGGTGCTGTCCTAGGAAGGCTGCGTaGTCTGCAAACCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: ARWKALGRLRALQTQGCCPRKAA*SANPGV
Trigger: CACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGG...ACAGCACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGGGCTTTCCACCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR GCA 90 bp ACAGAAAGGAAAGTGTGGAGTGCGGAGCGAGGCCTCTGGTTTGGCCAGCTCCGGTTGGCCAGCTCCGGTTaGTGGGGATGGCCACACCCT +
Preference number: 4 (lower is better)
Translates to: TERKVWSAERGLWFGQLRLASSG*WGWPHP
Trigger: AGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAA...CCGGAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTTTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR GCA 90 bp CCTGGCCTATGCGGGGCAGCTCAGTTTGAAGCAGGAACTTCCCCAAACGTGCCCTTGGCCAGCTCCGGTTaGTGGGGATGGCCACACCCT +
Preference number: 4 (lower is better)
Translates to: PGLCGAAQFEAGTSPNVPLASSG*WGWPHP
Trigger: AGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAA...GGGCACGTTTGGGGAAGTTCCTGCTTCAAACTGAGCTGCCCCGCATAGGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR GCA 90 bp GTCCAGAAGAGATTGGTGTGGGTTGACCTGGCCTATGCGGGGCAGCTCAGTTTGCAGCCAGGGCACGTGTaGCCAGCGCTGGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: VQKRLVWVDLAYAGQLSLQPGHV*PALAPA
Trigger: AGCAGGAGCCAGCGCTGGGCACACGTGCCCTGGCTG...CAAACTGAGCTGCCCCGCATAGGCCAGGTCAACCCACACCAATCTCTTCTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp GGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACCGCAGCCAGGGCACGTGTaGCCAGCGCTGGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: GTSPNVPRLQDSSIHFAPQPGHV*PALAPA
Trigger: AGCAGGAGCCAGCGCTGGGCACACGTGCCCTGGCTG...CGGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp CCTGGCCTATGCGGGGCAGCTCAGTTTGAAGCAGGAACTTCCCCAAACGTGCCCCCGGTGGGGTCATCTTaGCTCTCCGGACTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: PGLCGAAQFEAGTSPNVPPVGSS*LSGLLP
Trigger: AGGGAGCAGTCCGGAGAGGCAAGATGACCCCACCGG...GGGCACGTTTGGGGAAGTTCCTGCTTCAAACTGAGCTGCCCCGCATAGGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp CCGGTGGGGTCATCTTGCCTCTCCGGACTGCTCCCTCTGACTGGTGAAGCCACAGTCACAGCCTTGCAGTaGATGGTGGGTTCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: PVGSSCLSGLLPLTGEATVTALQ*MVGSVA
Trigger: GGCCACGGAACCCACCATGCACTGCAAGGCTGTGAC...TGTGGCTTCACCAGTCAGAGGGAGCAGTCCGGAGAGGCAAGATGACCCCACCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp CGCCCTGCCCCACGACAGCTGCGTCTGCAAGCGCCAGCTCTGAGCACTGTTCTCACGGCGGCCAACTGTTaGTGCAAGAGGGATGTGAAC +
Preference number: 4 (lower is better)
Translates to: RPAPRQLRLQAPALSTVLTAANC*CKRDVN
Trigger: GTTCACATCCCTCTTGCAGCAACAGTTGGCCGCCGT...GAGAACAGTGCTCAGAGCTGGCGCTTGCAGACGCAGCTGTCGTGGGGCAGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp GGGAAGTGCCTGTGTGGATGTGAAGCCACCTTGGGTGGGCGGCTCGGAGCTCCTGTAACTTCTCTGGGCTaGTTTCACCGACGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: GKCLCGCEATLGGRLGAPVTSLG*FHRRQR
Trigger: CCGCTGCCGTCGGTGAAACCAGCCCAGAGAAGTTAC...AGGAGCTCCGAGCCGCCCACCCAAGGTGGCTTCACATCCACACAGGCACTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp CAGCCTCGGGGCAGGATGCTTCAGGGCCGAGAACAGTGCCCAAAGCGCAGCCACGAACCTGGAGTGCAGTaGTTCCGTCCTTCACACGTG +
Preference number: 4 (lower is better)
Translates to: QPRGRMLQGREQCPKRSHEPGVQ*FRPSHV
Trigger: CACGTGTGAAGGACGGAACCACTGCACTCCAGGTTC...GTGGCTGCGCTTTGGGCACTGTTCTCGGCCCTGAAGCATCCTGCCCCGAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp GCACAGAAAGGAAAGTGTGGAGTGCGGAGCGAGGCCTCTGGTTTGGCCAGCTCCTCTGCGTCCATGTCCTaGTGCTCGTCTGGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: AQKGKCGVRSEASGLASSSASMS*CSSGAS
Trigger: CGAGGCCCCAGACGAGCACCAGGACATGGACGCAGA...GGAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTTTCTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp GGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACCGGGGCCGGAGAGGATCTaGGCTGTCCCACTGCGCCAG +
Preference number: 4 (lower is better)
Translates to: GTSPNVPRLQDSSIHFAPGPERI*AVPLRQ
Trigger: CTGGCGCAGTGGGACAGCCCAGATCCTCTCCGGCCC...CGGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp GGATTTATTGGGGGAACCGTACAAGCAGAGGAGAAGCAGGGGTGCCCAGGCTGTGGGCCGGAGAGGATCTaGGCTGTCCCACTGCGCCAG +
Preference number: 4 (lower is better)
Translates to: GFIGGTVQAEEKQGCPGCGPERI*AVPLRQ
Trigger: CTGGCGCAGTGGGACAGCCCAGATCCTCTCCGGCCC...ACAGCCTGGGCACCCCTGCTTCTCCTCTGCTTGTACGGTTCCCCCAATAAATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp CCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACCGTGCTGAGCATGATGCGGTGGCCCTaGGTTATGGCGCGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: PKRAQAPRQQHSLCTVLSMMRWP*VMARLR
Trigger: CCGCAGCCGCGCCATAACCCAGGGCCACCGCATCAT...GCTCAGCACGGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp GCTCCAAGACAGCAGCATTCACTTTGCACCGTGCTGAGCAGAGCGGGGCCTCGCCCCACATCGCCTCACTaGGACTCGCCATCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: APRQQHSLCTVLSRAGPRPTSPH*DSPSSL
Trigger: CAGACTGGATGGCGAGTCCCAGTGAGGCGATGTGGG...GCGAGGCCCCGCTCTGCTCAGCACGGTGCAAAGTGAATGCTGCTGTCTTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp CCTGGCCTATGCGGGGCAGCTCAGTTTGAAGCAGGAACTTCCCCAAACGTGCCCGATGTGAAGCCACCTTaGGTGGGCGGCTCGGAGCTC +
Preference number: 4 (lower is better)
Translates to: PGLCGAAQFEAGTSPNVPDVKPP*VGGSEL
Trigger: GAGCTCCGAGCCGCCCACCCAAGGTGGCTTCACATC...GGGCACGTTTGGGGAAGTTCCTGCTTCAAACTGAGCTGCCCCGCATAGGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp TGCGGACAGGTCCTTGTTAGTAAGGAGGAGGCTCTGCAGTCCCGGTGGGGTCATAACCCAGGGGTGCTGTaGCCGTACAGCAGGGGCGTC +
Preference number: 4 (lower is better)
Translates to: CGQVLVSKEEALQSRWGHNPGVL*PYSRGV
Trigger: GACGCCCCTGCTGTACGGCCACAGCACCCCTGGGTT...ATGACCCCACCGGGACTGCAGAGCCTCCTCCTTACTAACAAGGACCTGTCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp CCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACCGTGCTGAGGCGAGGCCTCTGGTTTaGCCAGCTCCGGTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: PQTCPGSKTAAFTLHRAEARPLV*PAPVAG
Trigger: CCCAGCAACCGGAGCTGGCCAAACCAGAGGCCTCGC...CTCAGCACGGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CCA 90 bp TGGCCGTACAGCAGGGGCGTCCGTGTCCAGGCAGCTTTGTCATGTCTTCCAAAGGCGAGGCCTCTGGTTTaGCCAGCTCCGGTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: WPYSRGVRVQAALSCLPKARPLV*PAPVAG
Trigger: CCCAGCAACCGGAGCTGGCCAAACCAGAGGCCTCGC...CTTTGGAAGACATGACAAAGCTGCCTGGACACGGACGCCCCTGCTGTACGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CCA 90 bp AGCACAGAAAGGAAAGTGTGGAGTGCGGAGCGAGGCCTCTGGTTTGGCCAGCTCGCGGAGCGAGGCCTCTaGTTTGGCCAGCTCCGGTTG +
Preference number: 4 (lower is better)
Translates to: STERKVWSAERGLWFGQLAERGL*FGQLRL
Trigger: CAACCGGAGCTGGCCAAACCAGAGGCCTCGCTCCGC...GAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTTTCTGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CCA 90 bp TGGCCGTACAGCAGGGGCGTCCGTGTCCAGGCAGCTTTGTCATGTCTTCCAAAGACGTGTGCCCAGCGCTaGCTCCTGCTGACCCCTGGA +
Preference number: 4 (lower is better)
Translates to: WPYSRGVRVQAALSCLPKTCAQR*LLLTPG
Trigger: TCCAGGGGTCAGCAGGAGCCAGCGCTGGGCACACGT...CTTTGGAAGACATGACAAAGCTGCCTGGACACGGACGCCCCTGCTGTACGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CCA 90 bp ACCCAGCACCTGTCCAGAAGAGATTGGTGTGGGTTGACCTGGCCTATGCGGGGCGCTCTGCAGTCCCGGTaGGGTCATCTTGCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: TQHLSRRDWCGLTWPMRGALQSR*GHLASP
Trigger: CGGAGAGGCAAGATGACCCCACCGGGACTGCAGAGC...GCCCCGCATAGGCCAGGTCAACCCACACCAATCTCTTCTGGACAGGTGCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp CTGACCCCTGGACTGGCTCCCATCTCGGGAATGACGCCTGCCGTGGGAATCGTGCAGCCTTGCAGTGCATaGTGGGTTCCGTGGCCAACT +
Preference number: 4 (lower is better)
Translates to: LTPGLAPISGMTPAVGIVQPCSA*WVPWPT
Trigger: AGTTGGCCACGGAACCCACCATGCACTGCAAGGCTG...CACGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAGCCAGTCCAGGGGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp CCCTGGACTGGCTCCCATCTCGGGAATGACGCCTGCCGTGGGAATCGTGGAGAGCAGCCTTGCAGTGCATaGTGGGTTCCGTGGCCAACT +
Preference number: 4 (lower is better)
Translates to: PWTGSHLGNDACRGNRGEQPCSA*WVPWPT
Trigger: AGTTGGCCACGGAACCCACCATGCACTGCAAGGCTG...CTCTCCACGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAGCCAGTCCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp CCGGTGGGGTCATCTTGCCTCTCCGGACTGCTCCCTCTGACTGGTGAAGCCACACCCTGGGCACTGGCATaGAGATGTGACGGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: PVGSSCLSGLLPLTGEATPWALA*RCDGVW
Trigger: CCACACTCCGTCACATCTCCATGCCAGTGCCCAGGG...TGTGGCTTCACCAGTCAGAGGGAGCAGTCCGGAGAGGCAAGATGACCCCACCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp GGAAGTGCCTGTGTGGATGTGAAGCCACCTTGGGTGGGCGGCTCGGAGCTCCTCGCCATAGGCAAAGGATaGACGGGTGGGCAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: GSACVDVKPPWVGGSELLAIGKG*TGGQVC
Trigger: GCAGACTTGCCCACCCGTCCATCCTTTGCCTATGGC...GAGGAGCTCCGAGCCGCCCACCCAAGGTGGCTTCACATCCACACAGGCACTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp GTGGAAAGCCCTAGGAAGGCTGCGTGCTCTGCAAACCCAGGGGTGCTGTGGCCGGCCATAGGCAAAGGATaGACGGGTGGGCAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: VESPRKAACSANPGVLWPAIGKG*TGGQVC
Trigger: GCAGACTTGCCCACCCGTCCATCCTTTGCCTATGGC...CGGCCACAGCACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGGGCTTTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp GTCCAGCTGGGGGCAGTTAGGTCAGCCTCGGGGCAGGATGCTTCAGGGCCGAGACATGGCTGCCTCCTGTaGGCGTACACATTTGGACCA +
Preference number: 4 (lower is better)
Translates to: VQLGAVRSASGQDASGPRHGCLL*AYTFGP
Trigger: TGGTCCAAATGTGTACGCCCACAGGAGGCAGCCATG...TCTCGGCCCTGAAGCATCCTGCCCCGAGGCTGACCTAACTGCCCCCAGCTGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp TGTGGAGTGCGGAGCGAGGCCTCTGGTTTGGCCAGCTCCGGTTGCTGGGGATGGCATGGCTGCCTCCTGTaGGCGTACACATTTGGACCA +
Preference number: 4 (lower is better)
Translates to: CGVRSEASGLASSGCWGWHGCLL*AYTFGP
Trigger: TGGTCCAAATGTGTACGCCCACAGGAGGCAGCCATG...CCATCCCCAGCAACCGGAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp GCACAGAAAGGAAAGTGTGGAGTGCGGAGCGAGGCCTCTGGTTTGGCCAGCTCCATGGCGGGAAGATGCTaGCCGTGGAGGCCCCATCAC +
Preference number: 4 (lower is better)
Translates to: AQKGKCGVRSEASGLASSMAGRC*PWRPHH
Trigger: GTGATGGGGCCTCCACGGCCAGCATCTTCCCGCCAT...GGAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTTTCTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp GCTCCAAGACAGCAGCATTCACTTTGCACCGTGCTGAGCAGAGCGGGGCCTCGCGCCCAGAGCAGGGCATaGCATCATGTGACCATGGCG +
Preference number: 4 (lower is better)
Translates to: APRQQHSLCTVLSRAGPRAQSRA*HHVTMA
Trigger: CGCCATGGTCACATGATGCCATGCCCTGCTCTGGGC...GCGAGGCCCCGCTCTGCTCAGCACGGTGCAAAGTGAATGCTGCTGTCTTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp GCTCCAAGACAGCAGCATTCACTTTGCACCGTGCTGAGCAGAGCGGGGCCTCGCCTTGTCATGGCTGAGTaGCCACCAGGGTGCGGGTTG +
Preference number: 4 (lower is better)
Translates to: APRQQHSLCTVLSRAGPRLVMAE*PPGCGL
Trigger: CAACCCGCACCCTGGTGGCCACTCAGCCATGACAAG...GCGAGGCCCCGCTCTGCTCAGCACGGTGCAAAGTGAATGCTGCTGTCTTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp AGTGGCTGTCAGGCCCTTGTCATGGCTGAGTGGCCACCAGGGTGCGGGTTGGTGGCAGGCGACATCTGGTaGCCCTGGAACTTTGCAAGG +
Preference number: 4 (lower is better)
Translates to: SGCQALVMAEWPPGCGLVAGDIW*PWNFAR
Trigger: CCTTGCAAAGTTCCAGGGCCACCAGATGTCGCCTGC...CACCAACCCGCACCCTGGTGGCCACTCAGCCATGACAAGGGCCTGACAGCCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp GACCCCTGGACTGGCTCCCATCTCGGGAATGACGCCTGCCGTGGGAATCGTGGATGGGCAGGCGACATCTaGTGGCCCTGGAACTTTGCA +
Preference number: 4 (lower is better)
Translates to: DPWTGSHLGNDACRGNRGWAGDI*WPWNFA
Trigger: TGCAAAGTTCCAGGGCCACCAGATGTCGCCTGCCCA...TCCACGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAGCCAGTCCAGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CAA 72 bp TGGCCGTACAGCAGGGGCGTCCGTGTCCAGGCAGCTTaGTCATGTCTTCCAAAGGTCAGGAAGGCGCCACCG +
Preference number: 4 (lower is better)
Translates to: WPYSRGVRVQAA*SCLPKVRKAPP
Trigger: CGGTGGCGCCTTCCTGACCTTTGGAAGACATGACAAAGCTGCCTGGACACGGACGCCCCTGCTGTACGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
3UTR CAA 72 bp CAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTaGCACCGTGCTGAGCAGAGCGGGGCCTCGCCAGGT +
Preference number: 4 (lower is better)
Translates to: QTCPGSKTAAFT*HRAEQSGASPG
Trigger: ACCTGGCGAGGCCCCGCTCTGCTCAGCACGGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
3UTR CAA 72 bp AAAGGAAAGTGTGGAGTGCGGAGCGAGGCCTCTGGTTaGGCCAGCTCCGGTTGCTGGGGATGGCCACACCCT +
Preference number: 4 (lower is better)
Translates to: KGKCGVRSEASG*ASSGCWGWPHP
Trigger: AGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
3UTR CAA 72 bp CATAGGCAAAGGATGGACGGGTGGGCAAGTCTGCCCTaGGCCCAGGGGTGCCACTTGCCCAGGCTTATGCAG +
Preference number: 4 (lower is better)
Translates to: HRQRMDGWASLP*AQGCHLPRLMQ
Trigger: CTGCATAAGCCTGGGCAAGTGGCACCCCTGGGCCAAGGGCAGACTTGCCCACCCGTCCATCCTTTGCCTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR TCA 90 bp AAGCCACACTCTGTGAAGCTGTCTGACAGAAGGGGACACGCCTTTGCTGCCCAGTCGGGCGGGTGGCAGTaGCCACGCATGACAGTCACC +
Preference number: 4 (lower is better)
Translates to: KPHSVKLSDRRGHAFAAQSGGWQ*PRMTVT
Trigger: GGTGACTGTCATGCGTGGTCACTGCCACCCGCCCGA...CTGGGCAGCAAAGGCGTGTCCCCTTCTGTCAGACAGCTTCACAGAGTGTGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR TCA 90 bp CCTGTCCAGAAGAGATTGGTGTGGGTTGACCTGGCCTATGCGGGGCAGCTCAGTGTGCCTGTGTGGATGTaGAGCCACCTTGGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: PVQKRLVWVDLAYAGQLSVPVWM*SHLGWA
Trigger: CGCCCACCCAAGGTGGCTTCACATCCACACAGGCAC...ACTGAGCTGCCCCGCATAGGCCAGGTCAACCCACACCAATCTCTTCTGGACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR TCA 90 bp GCGTCCGTGTCCAGGCAGCTTTGTCATGTCTTCCAAAGGTCAGGAAGGCGCCACTGCAAGCGCCAGCTCTaGGCACTGTTCTCCGCCGAC +
Preference number: 4 (lower is better)
Translates to: ASVSRQLCHVFQRSGRRHCKRQL*ALFSAD
Trigger: GTCGGCGGAGAACAGTGCTCAGAGCTGGCGCTTGCA...GTGGCGCCTTCCTGACCTTTGGAAGACATGACAAAGCTGCCTGGACACGGACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR TCA 90 bp CCCTGGACTGGCTCCCATCTCGGGAATGACGCCTGCCGTGGGAATCGTGGAGAGCGGGGCAGCTCAGTTTaGAGCAGGAACTTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: PWTGSHLGNDACRGNRGERGSSV*SRNFPK
Trigger: TTTGGGGAAGTTCCTGCTTCAAACTGAGCTGCCCCG...CTCTCCACGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAGCCAGTCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR TCA 90 bp AGGAGGCTCTGCAGTCCCGGTGGGGTCATCTTGCCTCTCCGGACTGCTCCCTCTCTCTGTGAAGCTGTCTaGCAGAAGGGGACACGCCTT +
Preference number: 4 (lower is better)
Translates to: RRLCSPGGVILPLRTAPSLCEAV*QKGTRL
Trigger: AAGGCGTGTCCCCTTCTGTCAGACAGCTTCACAGAG...AGAGGGAGCAGTCCGGAGAGGCAAGATGACCCCACCGGGACTGCAGAGCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR TCA 90 bp CCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACCGTGCTGAGATTACAGGGTGGGAGTaGAGGACCTCGCGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: PQTCPGSKTAAFTLHRAEITGWE*RTSRLR
Trigger: CCGCAGCCGCGAGGTCCTTCACTCCCACCCTGTAAT...CTCAGCACGGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR TCA 90 bp TGGGGGCAGTTAGGTCAGCCTCGGGGCAGGATGCTTCAGGGCCGAGAACAGTGCACTGGCATGGAGATGTaGCGGAGTGTGGTTTCACGG +
Preference number: 4 (lower is better)
Translates to: WGQLGQPRGRMLQGREQCTGMEM*RSVVSR
Trigger: CCGTGAAACCACACTCCGTCACATCTCCATGCCAGT...GCACTGTTCTCGGCCCTGAAGCATCCTGCCCCGAGGCTGACCTAACTGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR TCA 90 bp GCCAGGTGGAAAGCCCTAGGAAGGCTGCGTGCTCTGCAAACCCAGGGGTGCTGTCAGCTGGTGGCGGCATaGACTGGACCATCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: ARWKALGRLRALQTQGCCQLVAA*TGPSFS
Trigger: GCTGAAAGATGGTCCAGTTCATGCCGCCACCAGCTG...ACAGCACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGGGCTTTCCACCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR TCA 90 bp CAGGTGGAAAGCCCTAGGAAGGCTGCGTGCTCTGCAAACCCAGGGGTGCTGTGGGGGCATGGCATCATGTaGCCATGGCGGGAAGATGCT +
Preference number: 4 (lower is better)
Translates to: QVESPRKAACSANPGVLWGHGIM*PWREDA
Trigger: AGCATCTTCCCGCCATGGTCACATGATGCCATGCCC...CCACAGCACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGGGCTTTCCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp CGACATGAGGACACCATCCAAGAATTCCTCCTGGGAGACCTCCTGAGGAGACGCCTGCCCCACGACAGCTaGGTCTGCAAGCGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: RHEDTIQEFLLGDLLRRRLPHDS*VCKRQL
Trigger: GAGCTGGCGCTTGCAGACGCAGCTGTCGTGGGGCAG...GCGTCTCCTCAGGAGGTCTCCCAGGAGGAATTCTTGGATGGTGTCCTCATGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp CACTCTGTGAAGCTGTCTGACAGAAGGGGACACGCCTTTGCTGCCCAGGATGGACTGCCCCACGACAGCTaGGTCTGCAAGCGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: HSVKLSDRRGHAFAAQDGLPHDS*VCKRQL
Trigger: GAGCTGGCGCTTGCAGACGCAGCTGTCGTGGGGCAG...TCCATCCTGGGCAGCAAAGGCGTGTCCCCTTCTGTCAGACAGCTTCACAGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp ACAGAAAGGAAAGTGTGGAGTGCGGAGCGAGGCCTCTGGTTTGGCCAGCTCCGGGAAGGCTGCGTGCTCTaGAAACCCAGGGGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: TERKVWSAERGLWFGQLREGCVL*KPRGAV
Trigger: CACAGCACCCCTGGGTTTGCAGAGCACGCAGCCTTC...CCGGAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTTTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR GCA 90 bp GCACAGAAAGGAAAGTGTGGAGTGCGGAGCGAGGCCTCTGGTTTGGCCAGCTCCCCTAGGAAGGCTGCGTaGTCTGCAAACCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: AQKGKCGVRSEASGLASSPRKAA*SANPGV
Trigger: CACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGG...GGAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTTTCTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR GCA 90 bp AGCACAGAAAGGAAAGTGTGGAGTGCGGAGCGAGGCCTCTGGTTTGGCCAGCTCTTGGCCAGCTCCGGTTaGTGGGGATGGCCACACCCT +
Preference number: 4 (lower is better)
Translates to: STERKVWSAERGLWFGQLLASSG*WGWPHP
Trigger: AGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAA...GAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTTTCTGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR GCA 90 bp CCTGGCCTATGCGGGGCAGCTCAGTTTGAAGCAGGAACTTCCCCAAACGTGCCCCTCGGGAATGACGCCTaGCGTGGGAATCGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: PGLCGAAQFEAGTSPNVPLGNDA*RGNRGE
Trigger: CTCTCCACGATTCCCACGGCAGGCGTCATTCCCGAG...GGGCACGTTTGGGGAAGTTCCTGCTTCAAACTGAGCTGCCCCGCATAGGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR GCA 90 bp TTAGTAAGGAGGAGGCTCTGCAGTCCCGGTGGGGTCATCTTGCCTCTCCGGACTCCGGTGGGGTCATCTTaGCTCTCCGGACTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: LVRRRLCSPGGVILPLRTPVGSS*LSGLLP
Trigger: AGGGAGCAGTCCGGAGAGGCAAGATGACCCCACCGG...AGTCCGGAGAGGCAAGATGACCCCACCGGGACTGCAGAGCCTCCTCCTTACTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp TCCCCCTGGGCACTGGCATGGAGATGTGACGGAGTGTGGTTTCACGGCGGCCAAGAAGGACCTCGCGGCTaGGGACAGGTCCTTGTTAGT +
Preference number: 4 (lower is better)
Translates to: SPWALAWRCDGVWFHGGQEGPRG*GQVLVS
Trigger: ACTAACAAGGACCTGTCCGCAGCCGCGAGGTCCTTC...TTGGCCGCCGTGAAACCACACTCCGTCACATCTCCATGCCAGTGCCCAGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp GCTCCAAGACAGCAGCATTCACTTTGCACCGTGCTGAGCAGAGCGGGGCCTCGCACGACGCAAATGTCCTaGCATATCCGGGCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: APRQQHSLCTVLSRAGPRTTQMS*HIRAWE
Trigger: CTCCCAGGCCCGGATATGGCAGGACATTTGCGTCGT...GCGAGGCCCCGCTCTGCTCAGCACGGTGCAAAGTGAATGCTGCTGTCTTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp GTGGATGGGAAGTGCCTGTGTGGATGTGAAGCCACCTTGGGTGGGCGGCTCGGAACGACGCAAATGTCCTaGCATATCCGGGCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: VDGKCLCGCEATLGGRLGTTQMS*HIRAWE
Trigger: CTCCCAGGCCCGGATATGGCAGGACATTTGCGTCGT...TCCGAGCCGCCCACCCAAGGTGGCTTCACATCCACACAGGCACTTCCCATCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp CCAGGGGTGCTGTGGCCGTACAGCAGGGGCGTCCGTGTCCAGGCAGCTTTGTCAGAGAACAGAGCATCCTaGCTCTTCCAGCAACACGAC +
Preference number: 4 (lower is better)
Translates to: PGVLWPYSRGVRVQAALSENRAS*LFQQHD
Trigger: GTCGTGTTGCTGGAAGAGGCAGGATGCTCTGTTCTC...TGACAAAGCTGCCTGGACACGGACGCCCCTGCTGTACGGCCACAGCACCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp TGCGGACAGGTCCTTGTTAGTAAGGAGGAGGCTCTGCAGTCCCGGTGGGGTCATCCCTTGGCCCAGGGGTaGCACTTGCCCAGGCTTATG +
Preference number: 4 (lower is better)
Translates to: CGQVLVSKEEALQSRWGHPLAQG*HLPRLM
Trigger: CATAAGCCTGGGCAAGTGGCACCCCTGGGCCAAGGG...ATGACCCCACCGGGACTGCAGAGCCTCCTCCTTACTAACAAGGACCTGTCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp ACCCAGCACCTGTCCAGAAGAGATTGGTGTGGGTTGACCTGGCCTATGCGGGGCAGCCTCGGGGCAGGATaGTTCAGGGCCGAGAACAGT +
Preference number: 4 (lower is better)
Translates to: TQHLSRRDWCGLTWPMRGSLGAG*FRAENS
Trigger: ACTGTTCTCGGCCCTGAAGCATCCTGCCCCGAGGCT...GCCCCGCATAGGCCAGGTCAACCCACACCAATCTCTTCTGGACAGGTGCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp TCGGGGCAGGATGCTTCAGGGCCGAGAACAGTGCCCAAAGCGCAGCCACTGTGTTGCAGTGACTCAGGCTaGTGTGACCCGGGCGTTTCT +
Preference number: 4 (lower is better)
Translates to: SGQDASGPRTVPKAQPLCCSDSG*CDPGVS
Trigger: AGAAACGCCCGGGTCACAGCAGCCTGAGTCACTGCA...ACACAGTGGCTGCGCTTTGGGCACTGTTCTCGGCCCTGAAGCATCCTGCCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp AGCACAGAAAGGAAAGTGTGGAGTGCGGAGCGAGGCCTCTGGTTTGGCCAGCTCGAGTGGCCACCAGGGTaGGGGTTGGTGGCCATGAAG +
Preference number: 4 (lower is better)
Translates to: STERKVWSAERGLWFGQLEWPPG*GLVAMK
Trigger: CTTCATGGCCACCAACCCGCACCCTGGTGGCCACTC...GAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTTTCTGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp AGGGCCGAGAACAGTGCCCAAAGCGCAGCCACTGTGTTGTGTGTCCTCTGCCATGAGTGGCCACCAGGGTaGGGGTTGGTGGCCATGAAG +
Preference number: 4 (lower is better)
Translates to: RAENSAQSAATVLCVLCHEWPPG*GLVAMK
Trigger: CTTCATGGCCACCAACCCGCACCCTGGTGGCCACTC...ATGGCAGAGGACACACAACACAGTGGCTGCGCTTTGGGCACTGTTCTCGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp TGGGGGCAGTTAGGTCAGCCTCGGGGCAGGATGCTTCAGGGCCGAGAACAGTGCGTGGCCCTGGAACTTTaGAAGGGGAAGGCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: WGQLGQPRGRMLQGREQCVALEL*KGKALK
Trigger: CTTCAGAGCCTTCCCCTTGCAAAGTTCCAGGGCCAC...GCACTGTTCTCGGCCCTGAAGCATCCTGCCCCGAGGCTGACCTAACTGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp TGGAAAGCCCTAGGAAGGCTGCGTGCTCTGCAAACCCAGGGGTGCTGTGGCCGTGTAACTTCTCTGGGCTaGTTTCACCGACGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: WKALGRLRALQTQGCCGRVTSLG*FHRRQR
Trigger: CCGCTGCCGTCGGTGAAACCAGCCCAGAGAAGTTAC...ACGGCCACAGCACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGGGCTTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp AAAGGGCACGGACACACACCATGTGGTGCAAATGTCATACAGCAGGGTTTGTGGGAACTCGGGGCCTCCTaGGCTCCCCCGCTGCGCCGT +
Preference number: 4 (lower is better)
Translates to: KGHGHTPCGANVIQQGLWELGAS*APPLRR
Trigger: ACGGCGCAGCGGGGGAGCCCAGGAGGCCCCGAGTTC...CCACAAACCCTGCTGTATGACATTTGCACCACATGGTGTGTGTCCGTGCCCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp CTGTCCAGAAGAGATTGGTGTGGGTTGACCTGGCCTATGCGGGGCAGCTCAGTTAACCCAGGGGTGCTGTaGCCGTACAGCAGGGGCGTC +
Preference number: 4 (lower is better)
Translates to: LSRRDWCGLTWPMRGSSVNPGVL*PYSRGV
Trigger: GACGCCCCTGCTGTACGGCCACAGCACCCCTGGGTT...AACTGAGCTGCCCCGCATAGGCCAGGTCAACCCACACCAATCTCTTCTGGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CCA 90 bp CGACATGAGGACACCATCCAAGAATTCCTCCTGGGAGACCTCCTGAGGAGACGCTCCGGTTGCTGGGGATaGCCACACCCTGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RHEDTIQEFLLGDLLRRRSGCWG*PHPGSR
Trigger: CCTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGA...GCGTCTCCTCAGGAGGTCTCCCAGGAGGAATTCTTGGATGGTGTCCTCATGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp GGATTTATTGGGGGAACCGTACAAGCAGAGGAGAAGCAGGGGTGCCCAGGCTGTTCCGGTTGCTGGGGATaGCCACACCCTGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GFIGGTVQAEEKQGCPGCSGCWG*PHPGSR
Trigger: CCTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGA...ACAGCCTGGGCACCCCTGCTTCTCCTCTGCTTGTACGGTTCCCCCAATAAATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp GGATTTATTGGGGGAACCGTACAAGCAGAGGAGAAGCAGGGGTGCCCAGGCTGTTGCCCAGGATGGACCTaGGCCACCCAGGATGCCGCT +
Preference number: 4 (lower is better)
Translates to: GFIGGTVQAEEKQGCPGCCPGWT*ATQDAA
Trigger: AGCGGCATCCTGGGTGGCCCAGGTCCATCCTGGGCA...ACAGCCTGGGCACCCCTGCTTCTCCTCTGCTTGTACGGTTCCCCCAATAAATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp CCTGGCCTATGCGGGGCAGCTCAGTTTGAAGCAGGAACTTCCCCAAACGTGCCCCTTTGCTGCCCAGGATaGACCTGGGCCACCCAGGAT +
Preference number: 4 (lower is better)
Translates to: PGLCGAAQFEAGTSPNVPLCCPG*TWATQD
Trigger: ATCCTGGGTGGCCCAGGTCCATCCTGGGCAGCAAAG...GGGCACGTTTGGGGAAGTTCCTGCTTCAAACTGAGCTGCCCCGCATAGGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp AGGAGGCTCTGCAGTCCCGGTGGGGTCATCTTGCCTCTCCGGACTGCTCCCTCTAGATGTGACGGAGTGTaGTTTCACGGCGGCCAACTG +
Preference number: 4 (lower is better)
Translates to: RRLCSPGGVILPLRTAPSRCDGV*FHGGQL
Trigger: CAGTTGGCCGCCGTGAAACCACACTCCGTCACATCT...AGAGGGAGCAGTCCGGAGAGGCAAGATGACCCCACCGGGACTGCAGAGCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp TCGGGGCAGGATGCTTCAGGGCCGAGAACAGTGCCCAAAGCGCAGCCACTGTGTGTCTCCGTCCACTCTTaGTCCAGGTTACGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: SGQDASGPRTVPKAQPLCVSVHS*SRLRLG
Trigger: GCCCAGACGTAACCTGGACCAAGAGTGGACGGAGAC...ACACAGTGGCTGCGCTTTGGGCACTGTTCTCGGCCCTGAAGCATCCTGCCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp CTGACAGAAGGGGACACGCCTTTGCTGCCCAGGATGGACCTGGGCCACCCAGGAAGTGGGAGTCGGGATTaGAGTACTGGGTCTGTAGCC +
Preference number: 4 (lower is better)
Translates to: LTEGDTPLLPRMDLGHPGSGSRD*STGSVA
Trigger: GGCTACAGACCCAGTACTCCAATCCCGACTCCCACT...TCCTGGGTGGCCCAGGTCCATCCTGGGCAGCAAAGGCGTGTCCCCTTCTGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp GCTCCAAGACAGCAGCATTCACTTTGCACCGTGCTGAGCAGAGCGGGGCCTCGCCAGAGGTCCAGCTGGTaGCGGCATGAACTGGACCAT +
Preference number: 4 (lower is better)
Translates to: APRQQHSLCTVLSRAGPRQRSSW*RHELDH
Trigger: ATGGTCCAGTTCATGCCGCCACCAGCTGGACCTCTG...GCGAGGCCCCGCTCTGCTCAGCACGGTGCAAAGTGAATGCTGCTGTCTTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp CAGGCAGCTTTGTCATGTCTTCCAAAGGTCAGGAAGGCGCCACCGCCCTGCCCCGATCAGAGGTCCAGCTaGTGGCGGCATGAACTGGAC +
Preference number: 4 (lower is better)
Translates to: QAALSCLPKVRKAPPPCPDQRSS*WRHELD
Trigger: GTCCAGTTCATGCCGCCACCAGCTGGACCTCTGATC...GGGGCAGGGCGGTGGCGCCTTCCTGACCTTTGGAAGACATGACAAAGCTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp GTGGATGGGAAGTGCCTGTGTGGATGTGAAGCCACCTTGGGTGGGCGGCTCGGAGATCAGAGGTCCAGCTaGTGGCGGCATGAACTGGAC +
Preference number: 4 (lower is better)
Translates to: VDGKCLCGCEATLGGRLGDQRSS*WRHELD
Trigger: GTCCAGTTCATGCCGCCACCAGCTGGACCTCTGATC...TCCGAGCCGCCCACCCAAGGTGGCTTCACATCCACACAGGCACTTCCCATCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp ACAGAAAGGAAAGTGTGGAGTGCGGAGCGAGGCCTCTGGTTTGGCCAGCTCCGGCTTGTCATGGCTGAGTaGCCACCAGGGTGCGGGTTG +
Preference number: 4 (lower is better)
Translates to: TERKVWSAERGLWFGQLRLVMAE*PPGCGL
Trigger: CAACCCGCACCCTGGTGGCCACTCAGCCATGACAAG...CCGGAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTTTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp CCCTGGACTGGCTCCCATCTCGGGAATGACGCCTGCCGTGGGAATCGTGGAGAGGACATCTGGTGGCCCTaGAACTTTGCAAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PWTGSHLGNDACRGNRGEDIWWP*NFARGR
Trigger: CCTTCCCCTTGCAAAGTTCCAGGGCCACCAGATGTC...CTCTCCACGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAGCCAGTCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp GACACCATCCAAGAATTCCTCCTGGGAGACCTCCTGAGGAGACGCGAAGACCATCAGCAGAGGCAGGGCTaGAAGCAGGAGCTGCCCCGC +
Preference number: 4 (lower is better)
Translates to: DTIQEFLLGDLLRRREDHQQRQG*KQELPR
Trigger: GCGGGGCAGCTCCTGCTTCCAGCCCTGCCTCTGCTG...ATGGTCTTCGCGTCTCCTCAGGAGGTCTCCCAGGAGGAATTCTTGGATGGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp CAGGCAGCTTTGTCATGTCTTCCAAAGGTCAGGAAGGCGCCACCGCCCTGCCCCATCCGGAAGAGCCACTaGAAAGAGAGGCCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: QAALSCLPKVRKAPPPCPIRKSH*KERPAP
Trigger: AGGCGCTGGCCTCTCTTTCCAGTGGCTCTTCCGGAT...GGGGCAGGGCGGTGGCGCCTTCCTGACCTTTGGAAGACATGACAAAGCTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344592.9
CDS-3UTR CCA 90 bp GTACAGCAGGGGCGTCCGTGTCCAGGCAGCTTTGTCATGTCTTCCAAAGGTCAGAGGGATGGAGAGGGCTaGGCAGGGGCCATGTGGAGC +
Preference number: 4 (lower is better)
Translates to: VQQGRPCPGSFVMSSKGQRDGEG*AGAMWS
Trigger: GCTCCACATGGCCCCTGCCCAGCCCTCTCCATCCCT...CTGACCTTTGGAAGACATGACAAAGCTGCCTGGACACGGACGCCCCTGCTGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344592.9
3UTR CAA 72 bp TCCAGAGGCCCCAACCCCAGGTGTCTCCGTCCACTCTaGGTCCAGGTTACGTCTGGGCCAGGTGACTGTAAC +
Preference number: 4 (lower is better)
Translates to: SRGPNPRCLRPL*VQVTSGPGDCN
Trigger: GTTACAGTCACCTGGCCCAGACGTAACCTGGACCAAGAGTGGACGGAGACACCTGGGGTTGGGGCCTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR TCA 90 bp TCCCCCTGGGCACTGGCATGGAGATGTGACGGAGTGTGGTTTCACGGCGGCCAATCCGTCCTTCACACGTaGGTGAGAAGCGTCACCATC +
Preference number: 4 (lower is better)
Translates to: SPWALAWRCDGVWFHGGQSVLHT*VRSVTI
Trigger: GATGGTGACGCTTCTCACTCACGTGTGAAGGACGGA...TTGGCCGCCGTGAAACCACACTCCGTCACATCTCCATGCCAGTGCCCAGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR TCA 90 bp CTGGTGAAGCCACACTCTGTGAAGCTGTCTGACAGAAGGGGACACGCCTTTGCTTCGGGCGGGTGGCAGTaGCCACGCATGACAGTCACC +
Preference number: 4 (lower is better)
Translates to: LVKPHSVKLSDRRGHAFASGGWQ*PRMTVT
Trigger: GGTGACTGTCATGCGTGGTCACTGCCACCCGCCCGA...AGCAAAGGCGTGTCCCCTTCTGTCAGACAGCTTCACAGAGTGTGGCTTCACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR TCA 90 bp CAGCCTCGGGGCAGGATGCTTCAGGGCCGAGAACAGTGCCCAAAGCGCAGCCACTGTTCTCCGCCGACATaGGGACACCATCCAAGAATT +
Preference number: 4 (lower is better)
Translates to: QPRGRMLQGREQCPKRSHCSPPT*GHHPRI
Trigger: AATTCTTGGATGGTGTCCTCATGTCGGCGGAGAACA...GTGGCTGCGCTTTGGGCACTGTTCTCGGCCCTGAAGCATCCTGCCCCGAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR TCA 90 bp CCAGGGGTGCTGTGGCCGTACAGCAGGGGCGTCCGTGTCCAGGCAGCTTTGTCATGTTCTCCGCCGACATaGGGACACCATCCAAGAATT +
Preference number: 4 (lower is better)
Translates to: PGVLWPYSRGVRVQAALSCSPPT*GHHPRI
Trigger: AATTCTTGGATGGTGTCCTCATGTCGGCGGAGAACA...TGACAAAGCTGCCTGGACACGGACGCCCCTGCTGTACGGCCACAGCACCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR TCA 90 bp CTGTCCAGAAGAGATTGGTGTGGGTTGACCTGGCCTATGCGGGGCAGCTCAGTTTGCAAGCGCCAGCTCTaGGCACTGTTCTCCGCCGAC +
Preference number: 4 (lower is better)
Translates to: LSRRDWCGLTWPMRGSSVCKRQL*ALFSAD
Trigger: GTCGGCGGAGAACAGTGCTCAGAGCTGGCGCTTGCA...AACTGAGCTGCCCCGCATAGGCCAGGTCAACCCACACCAATCTCTTCTGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR TCA 90 bp AAGCAGGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACTTTGCACCGTGCTaGGCAGAGCGGGGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: KQELPQTCPGSKTAAFTLHFAPC*AERGLA
Trigger: GGCGAGGCCCCGCTCTGCTCAGCACGGTGCAAAGTG...CAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCCTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR TCA 90 bp AAGCCACACTCTGTGAAGCTGTCTGACAGAAGGGGACACGCCTTTGCTGCCCAGCTCCCATCTCGGGAATaGCGCCTGCCGTGGGAATCG +
Preference number: 4 (lower is better)
Translates to: KPHSVKLSDRRGHAFAAQLPSRE*RLPWES
Trigger: CGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAG...CTGGGCAGCAAAGGCGTGTCCCCTTCTGTCAGACAGCTTCACAGAGTGTGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR TCA 90 bp GGGAAGTGCCTGTGTGGATGTGAAGCCACCTTGGGTGGGCGGCTCGGAGCTCCTGCCAGTCCCGGTCAATaGCGCAAATATCCAAAAGGG +
Preference number: 4 (lower is better)
Translates to: GKCLCGCEATLGGRLGAPASPGQ*RKYPKG
Trigger: CCCTTTTGGATATTTGCGTCATTGACCGGGACTGGC...AGGAGCTCCGAGCCGCCCACCCAAGGTGGCTTCACATCCACACAGGCACTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp AACACGACGCAAATGTCCTGCCATATCCGGGCCTGGGAGAGGCCACAGGCTGCAGGACTGAGGGGCTGCTaGATCCAGCTTGCTGCACTT +
Preference number: 4 (lower is better)
Translates to: NTTQMSCHIRAWERPQAAGLRGC*IQLAAL
Trigger: AAGTGCAGCAAGCTGGATGCAGCAGCCCCTCAGTCC...TGCAGCCTGTGGCCTCTCCCAGGCCCGGATATGGCAGGACATTTGCGTCGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253928.14
CDS-3UTR GCA 90 bp AAGCAGGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCCGTCCTGCCCAGCCTaGAGCGTCTCCACGGCCTTC +
Preference number: 4 (lower is better)
Translates to: KQELPQTCPGSKTAAFTLPSCPA*SVSTAF
Trigger: GAAGGCCGTGGAGACGCTGCAGGCTGGGCAGGACGG...CAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCCTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp CGTCCATTGGAGAATCTCAGCCCAGCAACGCGAGCTGCCGTCTGTCTTCTAAGGCTGCAAACCCAGGGGTaGTGTGGCCGTACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: RPLENLSPATRAAVCLLRLQTQG*CGRTAG
Trigger: CCCTGCTGTACGGCCACAGCACCCCTGGGTTTGCAG...CCTTAGAAGACAGACGGCAGCTCGCGTTGCTGGGCTGAGATTCTCCAATGGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp TGGAAAGCCCTAGGAAGGCTGCGTGCTCTGCAAACCCAGGGGTGCTGTGGCCGTCAGCAGCATTCACTTTaGACCGTGCTGAGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: WKALGRLRALQTQGCCGRQQHSL*TVLSRA
Trigger: CGCTCTGCTCAGCACGGTGCAAAGTGAATGCTGCTG...ACGGCCACAGCACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGGGCTTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR GCA 90 bp CCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACCGTGCTGAGCCTCGGGAATGACGCCTaGCGTGGGAATCGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: PKRAQAPRQQHSLCTVLSLGNDA*RGNRGE
Trigger: CTCTCCACGATTCCCACGGCAGGCGTCATTCCCGAG...GCTCAGCACGGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR GCA 90 bp AGGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACCGGGACACGCCTTTGCTaGCCAGGATGGACCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RNFPKRAQAPRQQHSLCTGTRLC*PGWTWA
Trigger: GGCCCAGGTCCATCCTGGGCAGCAAAGGCGTGTCCC...GGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp GGACCATCTTTCAGCAAGTACCTTCCTCGGGCATGGCTGCCTCCTGTGGGCGTACAGGGCCGAGAACAGTaGCCAAAGCGCAGCCACTGT +
Preference number: 4 (lower is better)
Translates to: GPSFSKYLPRAWLPPVGVQGREQ*PKRSHC
Trigger: ACAGTGGCTGCGCTTTGGGCACTGTTCTCGGCCCTG...TACGCCCACAGGAGGCAGCCATGCCCGAGGAAGGTACTTGCTGAAAGATGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp GCGTCCGTGTCCAGGCAGCTTTGTCATGTCTTCCAAAGGTCAGGAAGGCGCCACTTCCTCGGGCATGGCTaGCTCCTGTGGGCGTACACA +
Preference number: 4 (lower is better)
Translates to: ASVSRQLCHVFQRSGRRHFLGHG*LLWAYT
Trigger: TGTGTACGCCCACAGGAGGCAGCCATGCCCGAGGAA...GTGGCGCCTTCCTGACCTTTGGAAGACATGACAAAGCTGCCTGGACACGGACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp AACACGACGCAAATGTCCTGCCATATCCGGGCCTGGGAGAGGCCACAGGCTGCAGCAGGTAGCAGAGGCTaGAGTGACTCAGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: NTTQMSCHIRAWERPQAAAGSRG*SDSGCC
Trigger: ACAGCAGCCTGAGTCACTGCAGCCTCTGCTACCTGC...TGCAGCCTGTGGCCTCTCCCAGGCCCGGATATGGCAGGACATTTGCGTCGTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp GGACCATCTTTCAGCAAGTACCTTCCTCGGGCATGGCTGCCTCCTGTGGGCGTAATGACCATGATGCGGTaGCCCTGGGTTATGGCGCGG +
Preference number: 4 (lower is better)
Translates to: GPSFSKYLPRAWLPPVGVMTMMR*PWVMAR
Trigger: CCGCGCCATAACCCAGGGCCACCGCATCATGGTCAT...TACGCCCACAGGAGGCAGCCATGCCCGAGGAAGGTACTTGCTGAAAGATGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp TTAGTAAGGAGGAGGCTCTGCAGTCCCGGTGGGGTCATCTTGCCTCTCCGGACTATGACCATGATGCGGTaGCCCTGGGTTATGGCGCGG +
Preference number: 4 (lower is better)
Translates to: LVRRRLCSPGGVILPLRTMTMMR*PWVMAR
Trigger: CCGCGCCATAACCCAGGGCCACCGCATCATGGTCAT...AGTCCGGAGAGGCAAGATGACCCCACCGGGACTGCAGAGCCTCCTCCTTACTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp TGTGGAGTGCGGAGCGAGGCCTCTGGTTTGGCCAGCTCCGGTTGCTGGGGATGGAACTTGAATCTTTTCTaGGTCCTCCTGCTGGGCCGT +
Preference number: 4 (lower is better)
Translates to: CGVRSEASGLASSGCWGWNLNLF*VLLLGR
Trigger: ACGGCCCAGCAGGAGGACCCAGAAAAGATTCAAGTT...CCATCCCCAGCAACCGGAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CCA 90 bp CTGGTGAAGCCACACTCTGTGAAGCTGTCTGACAGAAGGGGACACGCCTTTGCTCGGGGCCTCGCCAGGTaGAAAGCCCTAGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: LVKPHSVKLSDRRGHAFARGLAR*KALGRL
Trigger: CAGCCTTCCTAGGGCTTTCCACCTGGCGAGGCCCCG...AGCAAAGGCGTGTCCCCTTCTGTCAGACAGCTTCACAGAGTGTGGCTTCACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp AGGAGGCTCTGCAGTCCCGGTGGGGTCATCTTGCCTCTCCGGACTGCTCCCTCTCAGAAGAGATTGGTGTaGGTTGACCTGGCCTATGCG +
Preference number: 4 (lower is better)
Translates to: RRLCSPGGVILPLRTAPSQKRLV*VDLAYA
Trigger: CGCATAGGCCAGGTCAACCCACACCAATCTCTTCTG...AGAGGGAGCAGTCCGGAGAGGCAAGATGACCCCACCGGGACTGCAGAGCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp CAGGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACTGCCCAGGATGGACCTaGGCCACCCAGGATGCCGCT +
Preference number: 4 (lower is better)
Translates to: QELPQTCPGSKTAAFTLHCPGWT*ATQDAA
Trigger: AGCGGCATCCTGGGTGGCCCAGGTCCATCCTGGGCA...GTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp CTTCAGGGCCGAGAACAGTGCCCAAAGCGCAGCCACTGTGTTGTGTGTCCTCTGCTTTGCTGCCCAGGATaGACCTGGGCCACCCAGGAT +
Preference number: 4 (lower is better)
Translates to: LQGREQCPKRSHCVVCPLLCCPG*TWATQD
Trigger: ATCCTGGGTGGCCCAGGTCCATCCTGGGCAGCAAAG...CAGAGGACACACAACACAGTGGCTGCGCTTTGGGCACTGTTCTCGGCCCTGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp TGCGGACAGGTCCTTGTTAGTAAGGAGGAGGCTCTGCAGTCCCGGTGGGGTCATGCATGGTGGGTTCCGTaGCCAACTTGCCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: CGQVLVSKEEALQSRWGHAWWVP*PTCQGT
Trigger: TGTCCCCTGGCAAGTTGGCCACGGAACCCACCATGC...ATGACCCCACCGGGACTGCAGAGCCTCCTCCTTACTAACAAGGACCTGTCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp TCCCCCTGGGCACTGGCATGGAGATGTGACGGAGTGTGGTTTCACGGCGGCCAAGTGGGCGTACACATTTaGACCACACAGTGGGAGTCG +
Preference number: 4 (lower is better)
Translates to: SPWALAWRCDGVWFHGGQVGVHI*TTQWES
Trigger: CGACTCCCACTGTGTGGTCCAAATGTGTACGCCCAC...TTGGCCGCCGTGAAACCACACTCCGTCACATCTCCATGCCAGTGCCCAGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp GACCCCTGGACTGGCTCCCATCTCGGGAATGACGCCTGCCGTGGGAATCGTGGACGTATCTTGGGCATGTaGAGAGCTTCCCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: DPWTGSHLGNDACRGNRGRILGM*RASPSA
Trigger: TGCAGAAGGGGAAGCTCTCCACATGCCCAAGATACG...TCCACGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAGCCAGTCCAGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp AGGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACCCAAGGAGCCCACAGGTaGAGGGCGCAGGCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: RNFPKRAQAPRQQHSLCTQGAHR*RAQAWQ
Trigger: CTGCCAAGCCTGCGCCCTCCACCTGTGGGCTCCTTG...GGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp CACTCTGTGAAGCTGTCTGACAGAAGGGGACACGCCTTTGCTGCCCAGGATGGAGGAAGATGCTGGCCGTaGAGGCCCCATCACAGAGGC +
Preference number: 4 (lower is better)
Translates to: HSVKLSDRRGHAFAAQDGGRCWP*RPHHRG
Trigger: GCCTCTGTGATGGGGCCTCCACGGCCAGCATCTTCC...TCCATCCTGGGCAGCAAAGGCGTGTCCCCTTCTGTCAGACAGCTTCACAGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp TGCCCAGGCTGTCACAGCCTTGCAGTGCATGGTGGGTTCCGTGGCCAACTTGCCGACATCTGGTGGCCCTaGAACTTTGCAAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: CPGCHSLAVHGGFRGQLADIWWP*NFARGR
Trigger: CCTTCCCCTTGCAAAGTTCCAGGGCCACCAGATGTC...GGCAAGTTGGCCACGGAACCCACCATGCACTGCAAGGCTGTGACAGCCTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CAA 72 bp TCCTCGGGCATGGCTGCCTCCTGTGGGCGTACACATTaGGACCACACAGTGGGAGTCGGGATTGGAGTACTG +
Preference number: 4 (lower is better)
Translates to: SSGMAASCGRTH*DHTVGVGIGVL
Trigger: CAGTACTCCAATCCCGACTCCCACTGTGTGGTCCAAATGTGTACGCCCACAGGAGGCAGCCATGCCCGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR TCA 90 bp CTGGTGAAGCCACACTCTGTGAAGCTGTCTGACAGAAGGGGACACGCCTTTGCTGTGCCTGTGTGGATGTaGAGCCACCTTGGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: LVKPHSVKLSDRRGHAFAVPVWM*SHLGWA
Trigger: CGCCCACCCAAGGTGGCTTCACATCCACACAGGCAC...AGCAAAGGCGTGTCCCCTTCTGTCAGACAGCTTCACAGAGTGTGGCTTCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR TCA 90 bp CTGACCCCTGGACTGGCTCCCATCTCGGGAATGACGCCTGCCGTGGGAATCGTGTGTTCTCCGCCGACATaGGGACACCATCCAAGAATT +
Preference number: 4 (lower is better)
Translates to: LTPGLAPISGMTPAVGIVCSPPT*GHHPRI
Trigger: AATTCTTGGATGGTGTCCTCATGTCGGCGGAGAACA...CACGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAGCCAGTCCAGGGGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR TCA 90 bp AGGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACCTGCAAGCGCCAGCTCTaGGCACTGTTCTCCGCCGAC +
Preference number: 4 (lower is better)
Translates to: RNFPKRAQAPRQQHSLCTCKRQL*ALFSAD
Trigger: GTCGGCGGAGAACAGTGCTCAGAGCTGGCGCTTGCA...GGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR TCA 90 bp GGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACCGGAGATTGGTGTGGGTTaGCCTGGCCTATGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: GTSPNVPRLQDSSIHFAPEIGVG*PGLCGA
Trigger: TGCCCCGCATAGGCCAGGTCAACCCACACCAATCTC...CGGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR TCA 90 bp GTGGATGGGAAGTGCCTGTGTGGATGTGAAGCCACCTTGGGTGGGCGGCTCGGAGCTGCAAGAGGGATGTaGACAAGTACCAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: VDGKCLCGCEATLGGRLGAARGM*TSTSST
Trigger: TGTGGAGCTGGTACTTGTTCACATCCCTCTTGCAGC...TCCGAGCCGCCCACCCAAGGTGGCTTCACATCCACACAGGCACTTCCCATCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp GATTTATTGGGGGAACCGTACAAGCAGAGGAGAAGCAGGGGTGCCCAGGCTGTCGGGGACCCGGACCCCTaGGGTAGAGCAAACTATCCA +
Preference number: 4 (lower is better)
Translates to: DLLGEPYKQRRSRGAQAVGDPDP*GRANYP
Trigger: TGGATAGTTTGCTCTACCGCAGGGGTCCGGGTCCCC...GACAGCCTGGGCACCCCTGCTTCTCCTCTGCTTGTACGGTTCCCCCAATAAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp TGTGGTTTCACGGCGGCCAACTGTTGCTGCAAGAGGGATGTGAACAAGTACCAGGGCTCGGAGCTCCTCTaGCCACATCGCCTCACTGGG +
Preference number: 4 (lower is better)
Translates to: CGFTAANCCCKRDVNKYQGSELL*PHRLTG
Trigger: CCCAGTGAGGCGATGTGGGCAGAGGAGCTCCGAGCC...CTGGTACTTGTTCACATCCCTCTTGCAGCAACAGTTGGCCGCCGTGAAACCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp AGGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACCCTGCAAACCCAGGGGTaGTGTGGCCGTACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: RNFPKRAQAPRQQHSLCTLQTQG*CGRTAG
Trigger: CCCTGCTGTACGGCCACAGCACCCCTGGGTTTGCAG...GGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR GCA 90 bp GTCCAGAAGAGATTGGTGTGGGTTGACCTGGCCTATGCGGGGCAGCTCAGTTTGCCTAGGAAGGCTGCGTaGTCTGCAAACCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: VQKRLVWVDLAYAGQLSLPRKAA*SANPGV
Trigger: CACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGG...CAAACTGAGCTGCCCCGCATAGGCCAGGTCAACCCACACCAATCTCTTCTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR GCA 90 bp CCTGGCCTATGCGGGGCAGCTCAGTTTGAAGCAGGAACTTCCCCAAACGTGCCCAAGGAAAGTGTGGAGTaGGGAGCGAGGCCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: PGLCGAAQFEAGTSPNVPKESVE*GARPLV
Trigger: AACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTT...GGGCACGTTTGGGGAAGTTCCTGCTTCAAACTGAGCTGCCCCGCATAGGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR GCA 90 bp AAGCAGGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGGGGACACGCCTTTGCTaGCCAGGATGGACCTGGGCC +
Preference number: 4 (lower is better)
Translates to: KQELPQTCPGSKTAAFTLGTRLC*PGWTWA
Trigger: GGCCCAGGTCCATCCTGGGCAGCAAAGGCGTGTCCC...CAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCCTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp GTCCAGAAGAGATTGGTGTGGGTTGACCTGGCCTATGCGGGGCAGCTCAGTTTGAAGGGGACACGCCTTTaGTGCCCAGGATGGACCTGG +
Preference number: 4 (lower is better)
Translates to: VQKRLVWVDLAYAGQLSLKGTRL*CPGWTW
Trigger: CCAGGTCCATCCTGGGCAGCAAAGGCGTGTCCCCTT...CAAACTGAGCTGCCCCGCATAGGCCAGGTCAACCCACACCAATCTCTTCTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp CCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACCGTGCTGAGCGAAGGACCTCGCGGCTaGGGACAGGTCCTTGTTAGT +
Preference number: 4 (lower is better)
Translates to: PKRAQAPRQQHSLCTVLSEGPRG*GQVLVS
Trigger: ACTAACAAGGACCTGTCCGCAGCCGCGAGGTCCTTC...GCTCAGCACGGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp GGATTTATTGGGGGAACCGTACAAGCAGAGGAGAAGCAGGGGTGCCCAGGCTGTGTTCCGTGGCCAACTTaGCAGGGGACAGGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: GFIGGTVQAEEKQGCPGCVPWPT*QGTGLL
Trigger: CAACAGGCCTGTCCCCTGGCAAGTTGGCCACGGAAC...ACAGCCTGGGCACCCCTGCTTCTCCTCTGCTTGTACGGTTCCCCCAATAAATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp CGACATGAGGACACCATCCAAGAATTCCTCCTGGGAGACCTCCTGAGGAGACGCGTCACAGCCTTGCAGTaGATGGTGGGTTCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: RHEDTIQEFLLGDLLRRRVTALQ*MVGSVA
Trigger: GGCCACGGAACCCACCATGCACTGCAAGGCTGTGAC...GCGTCTCCTCAGGAGGTCTCCCAGGAGGAATTCTTGGATGGTGTCCTCATGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp GTCCAGAAGAGATTGGTGTGGGTTGACCTGGCCTATGCGGGGCAGCTCAGTTTGGTCACAGCCTTGCAGTaGATGGTGGGTTCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: VQKRLVWVDLAYAGQLSLVTALQ*MVGSVA
Trigger: GGCCACGGAACCCACCATGCACTGCAAGGCTGTGAC...CAAACTGAGCTGCCCCGCATAGGCCAGGTCAACCCACACCAATCTCTTCTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp CCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACCGTGCTGAGCAGGCTGTCACAGCCTTaGAGTGCATGGTGGGTTCCG +
Preference number: 4 (lower is better)
Translates to: PKRAQAPRQQHSLCTVLSRLSQP*SAWWVP
Trigger: CGGAACCCACCATGCACTGCAAGGCTGTGACAGCCT...GCTCAGCACGGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp TTAGTAAGGAGGAGGCTCTGCAGTCCCGGTGGGGTCATCTTGCCTCTCCGGACTTGCAGTGACTCAGGCTaGTGTGACCCGGGCGTTTCT +
Preference number: 4 (lower is better)
Translates to: LVRRRLCSPGGVILPLRTCSDSG*CDPGVS
Trigger: AGAAACGCCCGGGTCACAGCAGCCTGAGTCACTGCA...AGTCCGGAGAGGCAAGATGACCCCACCGGGACTGCAGAGCCTCCTCCTTACTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp ACCCAGCACCTGTCCAGAAGAGATTGGTGTGGGTTGACCTGGCCTATGCGGGGCGTGGCCCTGGAACTTTaGAAGGGGAAGGCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: TQHLSRRDWCGLTWPMRGVALEL*KGKALK
Trigger: CTTCAGAGCCTTCCCCTTGCAAAGTTCCAGGGCCAC...GCCCCGCATAGGCCAGGTCAACCCACACCAATCTCTTCTGGACAGGTGCTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp CCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACCGTGCTGAGCACCCCATCCTCATCTTaGTCGGAGGCTGTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PKRAQAPRQQHSLCTVLSTPSSS*SEAVSS
Trigger: GCTGCTCACAGCCTCCGACCAAGATGAGGATGGGGT...GCTCAGCACGGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp GACACCATCCAAGAATTCCTCCTGGGAGACCTCCTGAGGAGACGCGAAGACCATCCCTCCATATCGGGCTaGTGGCAGTGCCCACGCATC +
Preference number: 4 (lower is better)
Translates to: DTIQEFLLGDLLRRREDHPSISG*WQCPRI
Trigger: GATGCGTGGGCACTGCCACCAGCCCGATATGGAGGG...ATGGTCTTCGCGTCTCCTCAGGAGGTCTCCCAGGAGGAATTCTTGGATGGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp AGGAGGCTCTGCAGTCCCGGTGGGGTCATCTTGCCTCTCCGGACTGCTCCCTCTAACTTGAATCTTTTCTaGGTCCTCCTGCTGGGCCGT +
Preference number: 4 (lower is better)
Translates to: RRLCSPGGVILPLRTAPSNLNLF*VLLLGR
Trigger: ACGGCCCAGCAGGAGGACCCAGAAAAGATTCAAGTT...AGAGGGAGCAGTCCGGAGAGGCAAGATGACCCCACCGGGACTGCAGAGCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp AAGCAGGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCGGGGCCTCGCCAGGTaGAAAGCCCTAGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: KQELPQTCPGSKTAAFTLRGLAR*KALGRL
Trigger: CAGCCTTCCTAGGGCTTTCCACCTGGCGAGGCCCCG...CAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCCTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CCA 90 bp GGATTTATTGGGGGAACCGTACAAGCAGAGGAGAAGCAGGGGTGCCCAGGCTGTTGGTGTGGGTTGACCTaGCCTATGCGGGGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: GFIGGTVQAEEKQGCPGCWCGLT*PMRGSS
Trigger: TGAGCTGCCCCGCATAGGCCAGGTCAACCCACACCA...ACAGCCTGGGCACCCCTGCTTCTCCTCTGCTTGTACGGTTCCCCCAATAAATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp GGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACCGTGGTGTGGGTTGACCTaGCCTATGCGGGGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: GTSPNVPRLQDSSIHFAPWCGLT*PMRGSS
Trigger: TGAGCTGCCCCGCATAGGCCAGGTCAACCCACACCA...CGGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CCA 90 bp CCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACCGTGCTGAGCAGCCTTGCAGTGCATaGTGGGTTCCGTGGCCAACT +
Preference number: 4 (lower is better)
Translates to: PQTCPGSKTAAFTLHRAEQPCSA*WVPWPT
Trigger: AGTTGGCCACGGAACCCACCATGCACTGCAAGGCTG...CTCAGCACGGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp GAAGCAGGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGTAACAGCCCAGGCATaGGGAGGGGTCTCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: EAGTSPNVPRLQDSSIHFVTAQA*GGVSPW
Trigger: CCAGGGGGAGACCCCTCCCCATGCCTGGGCTGTTAC...AAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCCTGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp GACCCCTGGACTGGCTCCCATCTCGGGAATGACGCCTGCCGTGGGAATCGTGGAGGTGGCGGCATGAACTaGACCATCTTTCAGCAAGTA +
Preference number: 4 (lower is better)
Translates to: DPWTGSHLGNDACRGNRGGGGMN*TIFQQV
Trigger: TACTTGCTGAAAGATGGTCCAGTTCATGCCGCCACC...TCCACGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAGCCAGTCCAGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp GGACCATCTTTCAGCAAGTACCTTCCTCGGGCATGGCTGCCTCCTGTGGGCGTACAGAGGTCCAGCTGGTaGCGGCATGAACTGGACCAT +
Preference number: 4 (lower is better)
Translates to: GPSFSKYLPRAWLPPVGVQRSSW*RHELDH
Trigger: ATGGTCCAGTTCATGCCGCCACCAGCTGGACCTCTG...TACGCCCACAGGAGGCAGCCATGCCCGAGGAAGGTACTTGCTGAAAGATGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp CCCCAACCCCAGGTGTCTCCGTCCACTCTTGGTCCAGGTTACGTCTGGGCCAGGGTTTCTCTCGTATCTTaGGCATGTGGAGAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: PQPQVSPSTLGPGYVWARVSLVS*ACGELP
Trigger: GGGAAGCTCTCCACATGCCCAAGATACGAGAGAAAC...CCTGGCCCAGACGTAACCTGGACCAAGAGTGGACGGAGACACCTGGGGTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR TCA 90 bp GGAAGTGCCTGTGTGGATGTGAAGCCACCTTGGGTGGGCGGCTCGGAGCTCCTCCAGGAGAACACGTCTTaGAGCACAGCTGAACTTGAA +
Preference number: 4 (lower is better)
Translates to: GSACVDVKPPWVGGSELLQENTS*STAELE
Trigger: TTCAAGTTCAGCTGTGCTTCAAGACGTGTTCTCCTG...GAGGAGCTCCGAGCCGCCCACCCAAGGTGGCTTCACATCCACACAGGCACTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR TCA 90 bp GGGAAGTGCCTGTGTGGATGTGAAGCCACCTTGGGTGGGCGGCTCGGAGCTCCTCAGGAGAACACGTCTTaGAGCACAGCTGAACTTGAA +
Preference number: 4 (lower is better)
Translates to: GKCLCGCEATLGGRLGAPQENTS*STAELE
Trigger: TTCAAGTTCAGCTGTGCTTCAAGACGTGTTCTCCTG...AGGAGCTCCGAGCCGCCCACCCAAGGTGGCTTCACATCCACACAGGCACTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR TCA 90 bp CCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACCGTGCTGAGCGGGGCAGCTCAGTTTaGAGCAGGAACTTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: PQTCPGSKTAAFTLHRAERGSSV*SRNFPK
Trigger: TTTGGGGAAGTTCCTGCTTCAAACTGAGCTGCCCCG...CTCAGCACGGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR TCA 90 bp CAGGTGGAAAGCCCTAGGAAGGCTGCGTGCTCTGCAAACCCAGGGGTGCTGTGGCCGATATTCTTCCTCTaGTTCGCCTCATACCCGCTT +
Preference number: 4 (lower is better)
Translates to: QVESPRKAACSANPGVLWPIFFL*FASYPL
Trigger: AAGCGGGTATGAGGCGAATCAGAGGAAGAATATCGG...CCACAGCACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGGGCTTTCCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp CCTGTCCAGAAGAGATTGGTGTGGGTTGACCTGGCCTATGCGGGGCAGCTCAGTCAGCAGCATTCACTTTaGACCGTGCTGAGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: PVQKRLVWVDLAYAGQLSQQHSL*TVLSRA
Trigger: CGCTCTGCTCAGCACGGTGCAAAGTGAATGCTGCTG...ACTGAGCTGCCCCGCATAGGCCAGGTCAACCCACACCAATCTCTTCTGGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR GCA 90 bp AGCACAGAAAGGAAAGTGTGGAGTGCGGAGCGAGGCCTCTGGTTTGGCCAGCTCCAGCAGCATTCACTTTaGACCGTGCTGAGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: STERKVWSAERGLWFGQLQQHSL*TVLSRA
Trigger: CGCTCTGCTCAGCACGGTGCAAAGTGAATGCTGCTG...GAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTTTCTGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR GCA 90 bp GATTTATTGGGGGAACCGTACAAGCAGAGGAGAAGCAGGGGTGCCCAGGCTGTCAGGCTGTCACAGCCTTaGAGTGCATGGTGGGTTCCG +
Preference number: 4 (lower is better)
Translates to: DLLGEPYKQRRSRGAQAVRLSQP*SAWWVP
Trigger: CGGAACCCACCATGCACTGCAAGGCTGTGACAGCCT...GACAGCCTGGGCACCCCTGCTTCTCCTCTGCTTGTACGGTTCCCCCAATAAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp AACACGACGCAAATGTCCTGCCATATCCGGGCCTGGGAGAGGCCACAGGCTGCAGAGAACAGAGCATCCTaGCTCTTCCAGCAACACGAC +
Preference number: 4 (lower is better)
Translates to: NTTQMSCHIRAWERPQAAENRAS*LFQQHD
Trigger: GTCGTGTTGCTGGAAGAGGCAGGATGCTCTGTTCTC...TGCAGCCTGTGGCCTCTCCCAGGCCCGGATATGGCAGGACATTTGCGTCGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp CAACAGCATCATCTAAATTCACGTCCATTGGAGAATCTCAGCCCAGCAACGCGACCCGCTGCGCCGTGTTaGGGCGTTTCTCCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: QQHHLNSRPLENLSPATRPAAPC*GVSPAA
Trigger: GGCAGCGGGAGAAACGCCCCAACACGGCGCAGCGGG...TCGCGTTGCTGGGCTGAGATTCTCCAATGGACGTGAATTTAGATGATGCTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp GGGAGACCTCCTGAGGAGACGCGAAGACCATCGATGCTTTGGAAGAATGAAAAGATGATGCGGTGGCCCTaGGTTATGGCGCGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: GRPPEETRRPSMLWKNEKMMRWP*VMARLR
Trigger: CCGCAGCCGCGCCATAACCCAGGGCCACCGCATCAT...CTTTTCATTCTTCCAAAGCATCGATGGTCTTCGCGTCTCCTCAGGAGGTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp AAAGGGCACGGACACACACCATGTGGTGCAAATGTCATACAGCAGGGTTTGTGGACGTGTGCCCAGCGCTaGCTCCTGCTGACCCCTGGA +
Preference number: 4 (lower is better)
Translates to: KGHGHTPCGANVIQQGLWTCAQR*LLLTPG
Trigger: TCCAGGGGTCAGCAGGAGCCAGCGCTGGGCACACGT...CCACAAACCCTGCTGTATGACATTTGCACCACATGGTGTGTGTCCGTGCCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp CGACATGAGGACACCATCCAAGAATTCCTCCTGGGAGACCTCCTGAGGAGACGCCCTTGCAGTGCATGGTaGGTTCCGTGGCCAACTTGC +
Preference number: 4 (lower is better)
Translates to: RHEDTIQEFLLGDLLRRRPCSAW*VPWPTC
Trigger: GCAAGTTGGCCACGGAACCCACCATGCACTGCAAGG...GCGTCTCCTCAGGAGGTCTCCCAGGAGGAATTCTTGGATGGTGTCCTCATGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp CTGGTGAAGCCACACTCTGTGAAGCTGTCTGACAGAAGGGGACACGCCTTTGCTCCCTGGGCACTGGCATaGAGATGTGACGGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: LVKPHSVKLSDRRGHAFAPWALA*RCDGVW
Trigger: CCACACTCCGTCACATCTCCATGCCAGTGCCCAGGG...AGCAAAGGCGTGTCCCCTTCTGTCAGACAGCTTCACAGAGTGTGGCTTCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp CAGGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACGGCCATGAGTCCAGCTaGGGGCAGTTAGGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: QELPQTCPGSKTAAFTLHGHESS*GQLGQP
Trigger: AGGCTGACCTAACTGCCCCCAGCTGGACTCATGGCC...GTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp GCACAGAAAGGAAAGTGTGGAGTGCGGAGCGAGGCCTCTGGTTTGGCCAGCTCCTCGGGATTGGAGTACTaGGTCTGTAGCCTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: AQKGKCGVRSEASGLASSSGLEY*VCSLGH
Trigger: ATGGCCAAGGCTACAGACCCAGTACTCCAATCCCGA...GGAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTTTCTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp TGCCCAGGCTGTCACAGCCTTGCAGTGCATGGTGGGTTCCGTGGCCAACTTGCCATTTGGACCACACAGTaGGAGTCGGGATTGGAGTAC +
Preference number: 4 (lower is better)
Translates to: CPGCHSLAVHGGFRGQLAIWTTQ*ESGLEY
Trigger: GTACTCCAATCCCGACTCCCACTGTGTGGTCCAAAT...GGCAAGTTGGCCACGGAACCCACCATGCACTGCAAGGCTGTGACAGCCTGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp AAGCCACACTCTGTGAAGCTGTCTGACAGAAGGGGACACGCCTTTGCTGCCCAGCTCTGTGACAGTGACTaGGCAGGCGACATCTGGTGG +
Preference number: 4 (lower is better)
Translates to: KPHSVKLSDRRGHAFAAQLCDSD*AGDIWW
Trigger: CCACCAGATGTCGCCTGCCCAGTCACTGTCACAGAG...CTGGGCAGCAAAGGCGTGTCCCCTTCTGTCAGACAGCTTCACAGAGTGTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp AGGAGGCTCTGCAGTCCCGGTGGGGTCATCTTGCCTCTCCGGACTGCTCCCTCTCGGACACACACCATGTaGTGCAAATGTCATACAGCA +
Preference number: 4 (lower is better)
Translates to: RRLCSPGGVILPLRTAPSRTHTM*CKCHTA
Trigger: TGCTGTATGACATTTGCACCACATGGTGTGTGTCCG...AGAGGGAGCAGTCCGGAGAGGCAAGATGACCCCACCGGGACTGCAGAGCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CAA 72 bp GTGACTGGGCAGGCGACATCTGGTGGCCCTGGAACTTaGCAAGGGGAAGGCTCTGAAGCTCACTTAGTGGCT +
Preference number: 4 (lower is better)
Translates to: VTGQATSGGPGT*QGEGSEAHLVA
Trigger: AGCCACTAAGTGAGCTTCAGAGCCTTCCCCTTGCAAAGTTCCAGGGCCACCAGATGTCGCCTGCCCAGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR TCA 90 bp GATTTATTGGGGGAACCGTACAAGCAGAGGAGAAGCAGGGGTGCCCAGGCTGTCTCCGTCCTTCACACGTaGGTGAGAAGCGTCACCATC +
Preference number: 4 (lower is better)
Translates to: DLLGEPYKQRRSRGAQAVSVLHT*VRSVTI
Trigger: GATGGTGACGCTTCTCACTCACGTGTGAAGGACGGA...GACAGCCTGGGCACCCCTGCTTCTCCTCTGCTTGTACGGTTCCCCCAATAAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR TCA 90 bp AAGCCACACTCTGTGAAGCTGTCTGACAGAAGGGGACACGCCTTTGCTGCCCAGCTCTGTGAAGCTGTCTaGCAGAAGGGGACACGCCTT +
Preference number: 4 (lower is better)
Translates to: KPHSVKLSDRRGHAFAAQLCEAV*QKGTRL
Trigger: AAGGCGTGTCCCCTTCTGTCAGACAGCTTCACAGAG...CTGGGCAGCAAAGGCGTGTCCCCTTCTGTCAGACAGCTTCACAGAGTGTGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR TCA 90 bp CCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACCGTGCTGAGGCCAGTCCCGGTCAATaGCGCAAATATCCAAAAGGG +
Preference number: 4 (lower is better)
Translates to: PQTCPGSKTAAFTLHRAEASPGQ*RKYPKG
Trigger: CCCTTTTGGATATTTGCGTCATTGACCGGGACTGGC...CTCAGCACGGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp AGGCTTATGCAGATGAGTCTAGGCGTAACGCAGGCTAATGGCGAGAACAGAGCACTGCAAACCCAGGGGTaGTGTGGCCGTACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: RLMQMSLGVTQANGENRALQTQG*CGRTAG
Trigger: CCCTGCTGTACGGCCACAGCACCCCTGGGTTTGCAG...TGCTCTGTTCTCGCCATTAGCCTGCGTTACGCCTAGACTCATCTGCATAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp AAGGAGCACAGAAAGGAAAGTGTGGAGTGCGGAGCGAGGCCTCTGGTTTGGCCAAAGGAAAGTGTGGAGTaGGGAGCGAGGCCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: KEHRKESVECGARPLVWPKESVE*GARPLV
Trigger: AACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTT...TGGCCAAACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTTTCTGTGCTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR GCA 90 bp CACTCTGTGAAGCTGTCTGACAGAAGGGGACACGCCTTTGCTGCCCAGGATGGAACGGCGGCCAACTGTTaGTGCAAGAGGGATGTGAAC +
Preference number: 4 (lower is better)
Translates to: HSVKLSDRRGHAFAAQDGTAANC*CKRDVN
Trigger: GTTCACATCCCTCTTGCAGCAACAGTTGGCCGCCGT...TCCATCCTGGGCAGCAAAGGCGTGTCCCCTTCTGTCAGACAGCTTCACAGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp CTGGTGAAGCCACACTCTGTGAAGCTGTCTGACAGAAGGGGACACGCCTTTGCTGCAGGTAGCAGAGGCTaGAGTGACTCAGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LVKPHSVKLSDRRGHAFAAGSRG*SDSGCC
Trigger: ACAGCAGCCTGAGTCACTGCAGCCTCTGCTACCTGC...AGCAAAGGCGTGTCCCCTTCTGTCAGACAGCTTCACAGAGTGTGGCTTCACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp GGGAGACCTCCTGAGGAGACGCGAAGACCATCGATGCTTTGGAAGAATGAAAAGCCCTCCATATCGGGCTaGTGGCAGTGCCCACGCATC +
Preference number: 4 (lower is better)
Translates to: GRPPEETRRPSMLWKNEKPSISG*WQCPRI
Trigger: GATGCGTGGGCACTGCCACCAGCCCGATATGGAGGG...CTTTTCATTCTTCCAAAGCATCGATGGTCTTCGCGTCTCCTCAGGAGGTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp ACCCAGCACCTGTCCAGAAGAGATTGGTGTGGGTTGACCTGGCCTATGCGGGGCAACTTGAATCTTTTCTaGGTCCTCCTGCTGGGCCGT +
Preference number: 4 (lower is better)
Translates to: TQHLSRRDWCGLTWPMRGNLNLF*VLLLGR
Trigger: ACGGCCCAGCAGGAGGACCCAGAAAAGATTCAAGTT...GCCCCGCATAGGCCAGGTCAACCCACACCAATCTCTTCTGGACAGGTGCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CCA 90 bp GAAGCAGGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTCCCACATCGCCTCACTaGGACTCGCCATCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: EAGTSPNVPRLQDSSIHFPTSPH*DSPSSL
Trigger: CAGACTGGATGGCGAGTCCCAGTGAGGCGATGTGGG...AAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCCTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp CCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACCGTGCTGAGCCAAACCTAGGTGGATaGGAAGTGCCTGTGTGGATG +
Preference number: 4 (lower is better)
Translates to: PQTCPGSKTAAFTLHRAEPNLGG*EVPVWM
Trigger: CATCCACACAGGCACTTCCCATCCACCTAGGTTTGG...CTCAGCACGGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp TCTGATTCGCCTCATACCCGCTTAGGGGTGCCCAGAGCAGGGCATGGCATCATGCCAAACCTAGGTGGATaGGAAGTGCCTGTGTGGATG +
Preference number: 4 (lower is better)
Translates to: SDSPHTRLGVPRAGHGIMPNLGG*EVPVWM
Trigger: CATCCACACAGGCACTTCCCATCCACCTAGGTTTGG...CATGATGCCATGCCCTGCTCTGGGCACCCCTAAGCGGGTATGAGGCGAATCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp AATTCACGTCCATTGGAGAATCTCAGCCCAGCAACGCGAGCTGCCGTCTGTCTTTGGTGTGGGTTGACCTaGCCTATGCGGGGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: NSRPLENLSPATRAAVCLWCGLT*PMRGSS
Trigger: TGAGCTGCCCCGCATAGGCCAGGTCAACCCACACCA...AAGACAGACGGCAGCTCGCGTTGCTGGGCTGAGATTCTCCAATGGACGTGAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp CCTGTCCAGAAGAGATTGGTGTGGGTTGACCTGGCCTATGCGGGGCAGCTCAGTCAGAAGAGATTGGTGTaGGTTGACCTGGCCTATGCG +
Preference number: 4 (lower is better)
Translates to: PVQKRLVWVDLAYAGQLSQKRLV*VDLAYA
Trigger: CGCATAGGCCAGGTCAACCCACACCAATCTCTTCTG...ACTGAGCTGCCCCGCATAGGCCAGGTCAACCCACACCAATCTCTTCTGGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CCA 90 bp AAGGAGCACAGAAAGGAAAGTGTGGAGTGCGGAGCGAGGCCTCTGGTTTGGCCAACAGAAAGGAAAGTGTaGAGTGCGGAGCGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: KEHRKESVECGARPLVWPTERKV*SAERGL
Trigger: GAGGCCTCGCTCCGCACTCCACACTTTCCTTTCTGT...TGGCCAAACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTTTCTGTGCTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CCA 90 bp GAAGCAGGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTCTTTGCTGCCCAGGATaGACCTGGGCCACCCAGGAT +
Preference number: 4 (lower is better)
Translates to: EAGTSPNVPRLQDSSIHFLCCPG*TWATQD
Trigger: ATCCTGGGTGGCCCAGGTCCATCCTGGGCAGCAAAG...AAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCCTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp CTGTCCAGAAGAGATTGGTGTGGGTTGACCTGGCCTATGCGGGGCAGCTCAGTTAGATGTGACGGAGTGTaGTTTCACGGCGGCCAACTG +
Preference number: 4 (lower is better)
Translates to: LSRRDWCGLTWPMRGSSVRCDGV*FHGGQL
Trigger: CAGTTGGCCGCCGTGAAACCACACTCCGTCACATCT...AACTGAGCTGCCCCGCATAGGCCAGGTCAACCCACACCAATCTCTTCTGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp AGGCTTATGCAGATGAGTCTAGGCGTAACGCAGGCTAATGGCGAGAACAGAGCATGCCATATCCGGGCCTaGGAGAGGCCACAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: RLMQMSLGVTQANGENRACHIRA*ERPQAA
Trigger: TGCAGCCTGTGGCCTCTCCCAGGCCCGGATATGGCA...TGCTCTGTTCTCGCCATTAGCCTGCGTTACGCCTAGACTCATCTGCATAAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp ATGTGGTGCAAATGTCATACAGCAGGGTTTGTGGGCGAAGCACCAGCAGAGGCAGGCCATGAGTCCAGCTaGGGGCAGTTAGGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: MWCKCHTAGFVGEAPAEAGHESS*GQLGQP
Trigger: AGGCTGACCTAACTGCCCCCAGCTGGACTCATGGCC...TGCCTCTGCTGGTGCTTCGCCCACAAACCCTGCTGTATGACATTTGCACCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp TGGCCGTACAGCAGGGGCGTCCGTGTCCAGGCAGCTTTGTCATGTCTTCCAAAGTCGGGATTGGAGTACTaGGTCTGTAGCCTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: WPYSRGVRVQAALSCLPKSGLEY*VCSLGH
Trigger: ATGGCCAAGGCTACAGACCCAGTACTCCAATCCCGA...CTTTGGAAGACATGACAAAGCTGCCTGGACACGGACGCCCCTGCTGTACGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp CGACATGAGGACACCATCCAAGAATTCCTCCTGGGAGACCTCCTGAGGAGACGCGTGGGCGTACACATTTaGACCACACAGTGGGAGTCG +
Preference number: 4 (lower is better)
Translates to: RHEDTIQEFLLGDLLRRRVGVHI*TTQWES
Trigger: CGACTCCCACTGTGTGGTCCAAATGTGTACGCCCAC...GCGTCTCCTCAGGAGGTCTCCCAGGAGGAATTCTTGGATGGTGTCCTCATGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp CTTCAGGGCCGAGAACAGTGCCCAAAGCGCAGCCACTGTGTTGTGTGTCCTCTGCGTATCTTGGGCATGTaGAGAGCTTCCCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: LQGREQCPKRSHCVVCPLRILGM*RASPSA
Trigger: TGCAGAAGGGGAAGCTCTCCACATGCCCAAGATACG...CAGAGGACACACAACACAGTGGCTGCGCTTTGGGCACTGTTCTCGGCCCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp CAGGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACGCAGGCGACATCTGGTaGCCCTGGAACTTTGCAAGG +
Preference number: 4 (lower is better)
Translates to: QELPQTCPGSKTAAFTLHAGDIW*PWNFAR
Trigger: CCTTGCAAAGTTCCAGGGCCACCAGATGTCGCCTGC...GTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp CTGTCCAGAAGAGATTGGTGTGGGTTGACCTGGCCTATGCGGGGCAGCTCAGTTATACAGCAGGGTTTGTaGGCGAAGCACCAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LSRRDWCGLTWPMRGSSVIQQGL*AKHQQR
Trigger: CCTCTGCTGGTGCTTCGCCCACAAACCCTGCTGTAT...AACTGAGCTGCCCCGCATAGGCCAGGTCAACCCACACCAATCTCTTCTGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CAA 72 bp GGCGTACACATTTGGACCACACAGTGGGAGTCGGGATaGGAGTACTGGGTCTGTAGCCTTGGCCATGAGTCC +
Preference number: 4 (lower is better)
Translates to: GVHIWTTQWESG*EYWVCSLGHES
Trigger: GGACTCATGGCCAAGGCTACAGACCCAGTACTCCAATCCCGACTCCCACTGTGTGGTCCAAATGTGTACGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR TCA 90 bp ACCCAGCACCTGTCCAGAAGAGATTGGTGTGGGTTGACCTGGCCTATGCGGGGCCAGGAGAACACGTCTTaGAGCACAGCTGAACTTGAA +
Preference number: 4 (lower is better)
Translates to: TQHLSRRDWCGLTWPMRGQENTS*STAELE
Trigger: TTCAAGTTCAGCTGTGCTTCAAGACGTGTTCTCCTG...GCCCCGCATAGGCCAGGTCAACCCACACCAATCTCTTCTGGACAGGTGCTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR TCA 90 bp AAAGGGCACGGACACACACCATGTGGTGCAAATGTCATACAGCAGGGTTTGTGGTCCTGGGAGACCTCCTaGGGAGACGCGAAGACCATC +
Preference number: 4 (lower is better)
Translates to: KGHGHTPCGANVIQQGLWSWETS*GDAKTI
Trigger: GATGGTCTTCGCGTCTCCTCAGGAGGTCTCCCAGGA...CCACAAACCCTGCTGTATGACATTTGCACCACATGGTGTGTGTCCGTGCCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR TCA 90 bp GGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACCGGCTGCAAGAGGGATGTaGACAAGTACCAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: GTSPNVPRLQDSSIHFAPAARGM*TSTSST
Trigger: TGTGGAGCTGGTACTTGTTCACATCCCTCTTGCAGC...CGGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR TCA 90 bp ATGTGGTGCAAATGTCATACAGCAGGGTTTGTGGGCGAAGCACCAGCAGAGGCACAGCTGGTGGCGGCATaGACTGGACCATCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: MWCKCHTAGFVGEAPAEAQLVAA*TGPSFS
Trigger: GCTGAAAGATGGTCCAGTTCATGCCGCCACCAGCTG...TGCCTCTGCTGGTGCTTCGCCCACAAACCCTGCTGTATGACATTTGCACCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR TCA 90 bp GAAGCAGGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGGGCATGGCATCATGTaGCCATGGCGGGAAGATGCT +
Preference number: 4 (lower is better)
Translates to: EAGTSPNVPRLQDSSIHFGHGIM*PWREDA
Trigger: AGCATCTTCCCGCCATGGTCACATGATGCCATGCCC...AAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCCTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR TCA 90 bp TGCGGACAGGTCCTTGTTAGTAAGGAGGAGGCTCTGCAGTCCCGGTGGGGTCATCCGATATTCTTCCTCTaGTTCGCCTCATACCCGCTT +
Preference number: 4 (lower is better)
Translates to: CGQVLVSKEEALQSRWGHPIFFL*FASYPL
Trigger: AAGCGGGTATGAGGCGAATCAGAGGAAGAATATCGG...ATGACCCCACCGGGACTGCAGAGCCTCCTCCTTACTAACAAGGACCTGTCCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp CTGGTGAAGCCACACTCTGTGAAGCTGTCTGACAGAAGGGGACACGCCTTTGCTCAGCAGCATTCACTTTaGACCGTGCTGAGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: LVKPHSVKLSDRRGHAFAQQHSL*TVLSRA
Trigger: CGCTCTGCTCAGCACGGTGCAAAGTGAATGCTGCTG...AGCAAAGGCGTGTCCCCTTCTGTCAGACAGCTTCACAGAGTGTGGCTTCACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp GGGAGACCTCCTGAGGAGACGCGAAGACCATCGATGCTTTGGAAGAATGAAAAGAAGGGGACACGCCTTTaGTGCCCAGGATGGACCTGG +
Preference number: 4 (lower is better)
Translates to: GRPPEETRRPSMLWKNEKKGTRL*CPGWTW
Trigger: CCAGGTCCATCCTGGGCAGCAAAGGCGTGTCCCCTT...CTTTTCATTCTTCCAAAGCATCGATGGTCTTCGCGTCTCCTCAGGAGGTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp GGGAGACCTCCTGAGGAGACGCGAAGACCATCGATGCTTTGGAAGAATGAAAAGGTAAGGAGGAGGCTCTaGAGTCCCGGTGGGGTCATC +
Preference number: 4 (lower is better)
Translates to: GRPPEETRRPSMLWKNEKVRRRL*SPGGVI
Trigger: GATGACCCCACCGGGACTGCAGAGCCTCCTCCTTAC...CTTTTCATTCTTCCAAAGCATCGATGGTCTTCGCGTCTCCTCAGGAGGTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp AGGCTTATGCAGATGAGTCTAGGCGTAACGCAGGCTAATGGCGAGAACAGAGCAGTAAGGAGGAGGCTCTaGAGTCCCGGTGGGGTCATC +
Preference number: 4 (lower is better)
Translates to: RLMQMSLGVTQANGENRAVRRRL*SPGGVI
Trigger: GATGACCCCACCGGGACTGCAGAGCCTCCTCCTTAC...TGCTCTGTTCTCGCCATTAGCCTGCGTTACGCCTAGACTCATCTGCATAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp CCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACCGTGCTGAGGTGTTGTGTGTCCTCTaGCATAGGCAAAGGATGGAC +
Preference number: 4 (lower is better)
Translates to: PQTCPGSKTAAFTLHRAEVLCVL*HRQRMD
Trigger: GTCCATCCTTTGCCTATGGCAGAGGACACACAACAC...CTCAGCACGGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp CATCACACACTAGGCTTGGTGACTGCACTTGAGGGACTCACAGGACTTAGCCTAATGACCATGATGCGGTaGCCCTGGGTTATGGCGCGG +
Preference number: 4 (lower is better)
Translates to: HHTLGLVTALEGLTGLSLMTMMR*PWVMAR
Trigger: CCGCGCCATAACCCAGGGCCACCGCATCATGGTCAT...TAGGCTAAGTCCTGTGAGTCCCTCAAGTGCAGTCACCAAGCCTAGTGTGTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571983.5
CDS-3UTR CCA 90 bp AAAGGGCACGGACACACACCATGTGGTGCAAATGTCATACAGCAGGGTTTGTGGCCCACATCGCCTCACTaGGACTCGCCATCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: KGHGHTPCGANVIQQGLWPTSPH*DSPSSL
Trigger: CAGACTGGATGGCGAGTCCCAGTGAGGCGATGTGGG...CCACAAACCCTGCTGTATGACATTTGCACCACATGGTGTGTGTCCGTGCCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp AAGCCACACTCTGTGAAGCTGTCTGACAGAAGGGGACACGCCTTTGCTGCCCAGCCAAACCTAGGTGGATaGGAAGTGCCTGTGTGGATG +
Preference number: 4 (lower is better)
Translates to: KPHSVKLSDRRGHAFAAQPNLGG*EVPVWM
Trigger: CATCCACACAGGCACTTCCCATCCACCTAGGTTTGG...CTGGGCAGCAAAGGCGTGTCCCCTTCTGTCAGACAGCTTCACAGAGTGTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp TGGTTTGGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTGGCAGCAGGCGGCCAGACCATCGATGCTTTaGAAGAATGAAAAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: WFGQLRLLGMATPWQQAARPSML*KNEKKF
Trigger: AAACTTCTTTTCATTCTTCCAAAGCATCGATGGTCT...GGCCGCCTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp AAGCAGGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCCTTGCAGTGCATGGTaGGTTCCGTGGCCAACTTGC +
Preference number: 4 (lower is better)
Translates to: KQELPQTCPGSKTAAFTLPCSAW*VPWPTC
Trigger: GCAAGTTGGCCACGGAACCCACCATGCACTGCAAGG...CAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCCTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp CCAAGGCAACAGCATCATCTAAATTCACGTCCATTGGAGAATCTCAGCCCAGCAGTAACAGCCCAGGCATaGGGAGGGGTCTCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: PRQQHHLNSRPLENLSPAVTAQA*GGVSPW
Trigger: CCAGGGGGAGACCCCTCCCCATGCCTGGGCTGTTAC...TGCTGGGCTGAGATTCTCCAATGGACGTGAATTTAGATGATGCTGTTGCCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp TTAGTAAGGAGGAGGCTCTGCAGTCCCGGTGGGGTCATCTTGCCTCTCCGGACTGGTGGCGGCATGAACTaGACCATCTTTCAGCAAGTA +
Preference number: 4 (lower is better)
Translates to: LVRRRLCSPGGVILPLRTGGGMN*TIFQQV
Trigger: TACTTGCTGAAAGATGGTCCAGTTCATGCCGCCACC...AGTCCGGAGAGGCAAGATGACCCCACCGGGACTGCAGAGCCTCCTCCTTACTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp AGGAGGCTCTGCAGTCCCGGTGGGGTCATCTTGCCTCTCCGGACTGCTCCCTCTTTCATGAGATGTTGTTaGCACTGTCATGTCAAAGGG +
Preference number: 4 (lower is better)
Translates to: RRLCSPGGVILPLRTAPSFMRCC*HCHVKG
Trigger: CCCTTTGACATGACAGTGCCAACAACATCTCATGAA...AGAGGGAGCAGTCCGGAGAGGCAAGATGACCCCACCGGGACTGCAGAGCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR TCA 90 bp ATGTGGTGCAAATGTCATACAGCAGGGTTTGTGGGCGAAGCACCAGCAGAGGCAGCAAGGGGAAGGCTCTaGAGCTCACTTAGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: MWCKCHTAGFVGEAPAEAARGRL*SSLSGC
Trigger: ACAGCCACTAAGTGAGCTTCAGAGCCTTCCCCTTGC...TGCCTCTGCTGGTGCTTCGCCCACAAACCCTGCTGTATGACATTTGCACCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp ATGTGGTGCAAATGTCATACAGCAGGGTTTGTGGGCGAAGCACCAGCAGAGGCAAAGGAAAGTGTGGAGTaGGGAGCGAGGCCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: MWCKCHTAGFVGEAPAEAKESVE*GARPLV
Trigger: AACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTT...TGCCTCTGCTGGTGCTTCGCCCACAAACCCTGCTGTATGACATTTGCACCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp CCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACCGTGCTGAGACACACACCATGTGGTaGAAATGTCATACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: PQTCPGSKTAAFTLHRAETHTMW*KCHTAG
Trigger: CCCTGCTGTATGACATTTGCACCACATGGTGTGTGT...CTCAGCACGGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp CCAAGGCAACAGCATCATCTAAATTCACGTCCATTGGAGAATCTCAGCCCAGCATCTGCGTCCATGTCCTaGTGCTCGTCTGGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: PRQQHHLNSRPLENLSPASASMS*CSSGAS
Trigger: CGAGGCCCCAGACGAGCACCAGGACATGGACGCAGA...TGCTGGGCTGAGATTCTCCAATGGACGTGAATTTAGATGATGCTGTTGCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp GGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACCGAACTTGAATCTTTTCTaGGTCCTCCTGCTGGGCCGT +
Preference number: 4 (lower is better)
Translates to: GTSPNVPRLQDSSIHFAPNLNLF*VLLLGR
Trigger: ACGGCCCAGCAGGAGGACCCAGAAAAGATTCAAGTT...CGGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CCA 90 bp CCAGTCCCGGTCAATGACGCAAATATCCAAAAGGGAAGAGAAGCCGATATTCTTCGGGGCCTCGCCAGGTaGAAAGCCCTAGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: PVPVNDANIQKGREADILRGLAR*KALGRL
Trigger: CAGCCTTCCTAGGGCTTTCCACCTGGCGAGGCCCCG...AAGAATATCGGCTTCTCTTCCCTTTTGGATATTTGCGTCATTGACCGGGACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp CTGGTGAAGCCACACTCTGTGAAGCTGTCTGACAGAAGGGGACACGCCTTTGCTCAGAAGAGATTGGTGTaGGTTGACCTGGCCTATGCG +
Preference number: 4 (lower is better)
Translates to: LVKPHSVKLSDRRGHAFAQKRLV*VDLAYA
Trigger: CGCATAGGCCAGGTCAACCCACACCAATCTCTTCTG...AGCAAAGGCGTGTCCCCTTCTGTCAGACAGCTTCACAGAGTGTGGCTTCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp CAGGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACCAGAAGAGATTGGTGTaGGTTGACCTGGCCTATGCG +
Preference number: 4 (lower is better)
Translates to: QELPQTCPGSKTAAFTLHQKRLV*VDLAYA
Trigger: CGCATAGGCCAGGTCAACCCACACCAATCTCTTCTG...GTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CCA 90 bp AAGCAGGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGACAGAAAGGAAAGTGTaGAGTGCGGAGCGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: KQELPQTCPGSKTAAFTLTERKV*SAERGL
Trigger: GAGGCCTCGCTCCGCACTCCACACTTTCCTTTCTGT...CAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CCA 90 bp GGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACCGATTTGGACCACACAGTaGGAGTCGGGATTGGAGTAC +
Preference number: 4 (lower is better)
Translates to: GTSPNVPRLQDSSIHFAPIWTTQ*ESGLEY
Trigger: GTACTCCAATCCCGACTCCCACTGTGTGGTCCAAAT...CGGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp AGGCTTATGCAGATGAGTCTAGGCGTAACGCAGGCTAATGGCGAGAACAGAGCACTCTGTGACAGTGACTaGGCAGGCGACATCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RLMQMSLGVTQANGENRALCDSD*AGDIWW
Trigger: CCACCAGATGTCGCCTGCCCAGTCACTGTCACAGAG...TGCTCTGTTCTCGCCATTAGCCTGCGTTACGCCTAGACTCATCTGCATAAGCCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp TTAGTAAGGAGGAGGCTCTGCAGTCCCGGTGGGGTCATCTTGCCTCTCCGGACTCGGACACACACCATGTaGTGCAAATGTCATACAGCA +
Preference number: 4 (lower is better)
Translates to: LVRRRLCSPGGVILPLRTRTHTM*CKCHTA
Trigger: TGCTGTATGACATTTGCACCACATGGTGTGTGTCCG...AGTCCGGAGAGGCAAGATGACCCCACCGGGACTGCAGAGCCTCCTCCTTACTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CAA 72 bp AGATGTGACGGAGTGTGGTTTCACGGCGGCCAACTGTaGCTGCAAGAGGGATGTGAACAAGTACCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: RCDGVWFHGGQL*LQEGCEQVPAP
Trigger: TGGAGCTGGTACTTGTTCACATCCCTCTTGCAGCAACAGTTGGCCGCCGTGAAACCACACTCCGTCACATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
3UTR CAA 72 bp CACCCAAGGCAACAGCATCATCTAAATTCACGTCCATaGGAGAATCTCAGCCCAGCAACGCGAGCTGCCGTC +
Preference number: 4 (lower is better)
Translates to: HPRQQHHLNSRP*ENLSPATRAAV
Trigger: GACGGCAGCTCGCGTTGCTGGGCTGAGATTCTCCAATGGACGTGAATTTAGATGATGCTGTTGCCTTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp CAACAGCATCATCTAAATTCACGTCCATTGGAGAATCTCAGCCCAGCAACGCGACTCGGGAATGACGCCTaGCGTGGGAATCGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: QQHHLNSRPLENLSPATRLGNDA*RGNRGE
Trigger: CTCTCCACGATTCCCACGGCAGGCGTCATTCCCGAG...TCGCGTTGCTGGGCTGAGATTCTCCAATGGACGTGAATTTAGATGATGCTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp CTCCTGAGGAGACGCGAAGACCATCGATGCTTTGGAAGAATGAAAAGAAGTTTCCCGGTGGGGTCATCTTaGCTCTCCGGACTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: LLRRREDHRCFGRMKRSFPVGSS*LSGLLP
Trigger: AGGGAGCAGTCCGGAGAGGCAAGATGACCCCACCGG...GAAACTTCTTTTCATTCTTCCAAAGCATCGATGGTCTTCGCGTCTCCTCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp GGGAGACCTCCTGAGGAGACGCGAAGACCATCGATGCTTTGGAAGAATGAAAAGGAACCTGGAGTGCAGTaGTTCCGTCCTTCACACGTG +
Preference number: 4 (lower is better)
Translates to: GRPPEETRRPSMLWKNEKEPGVQ*FRPSHV
Trigger: CACGTGTGAAGGACGGAACCACTGCACTCCAGGTTC...CTTTTCATTCTTCCAAAGCATCGATGGTCTTCGCGTCTCCTCAGGAGGTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp AAAGGGCACGGACACACACCATGTGGTGCAAATGTCATACAGCAGGGTTTGTGGACAGAAAGGAAAGTGTaGAGTGCGGAGCGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: KGHGHTPCGANVIQQGLWTERKV*SAERGL
Trigger: GAGGCCTCGCTCCGCACTCCACACTTTCCTTTCTGT...CCACAAACCCTGCTGTATGACATTTGCACCACATGGTGTGTGTCCGTGCCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp GGGAGACCTCCTGAGGAGACGCGAAGACCATCGATGCTTTGGAAGAATGAAAAGATACAGCAGGGTTTGTaGGCGAAGCACCAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GRPPEETRRPSMLWKNEKIQQGL*AKHQQR
Trigger: CCTCTGCTGGTGCTTCGCCCACAAACCCTGCTGTAT...CTTTTCATTCTTCCAAAGCATCGATGGTCTTCGCGTCTCCTCAGGAGGTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp CCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACCGTGCTGAGCGCGAAGACCATCGATaGTTTGGAAGAATGAAAAGA +
Preference number: 4 (lower is better)
Translates to: PQTCPGSKTAAFTLHRAEREDHR*FGRMKR
Trigger: TCTTTTCATTCTTCCAAAGCATCGATGGTCTTCGCG...CTCAGCACGGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp TGTGGTTTCACGGCGGCCAACTGTTGCTGCAAGAGGGATGTGAACAAGTACCAGGTGTTGTGTGTCCTCTaGCATAGGCAAAGGATGGAC +
Preference number: 4 (lower is better)
Translates to: CGFTAANCCCKRDVNKYQVLCVL*HRQRMD
Trigger: GTCCATCCTTTGCCTATGGCAGAGGACACACAACAC...CTGGTACTTGTTCACATCCCTCTTGCAGCAACAGTTGGCCGCCGTGAAACCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR GCA 90 bp CCAGTCCCGGTCAATGACGCAAATATCCAAAAGGGAAGAGAAGCCGATATTCTTAGCCTCGGGGCAGGATaGTTCAGGGCCGAGAACAGT +
Preference number: 4 (lower is better)
Translates to: PVPVNDANIQKGREADILSLGAG*FRAENS
Trigger: ACTGTTCTCGGCCCTGAAGCATCCTGCCCCGAGGCT...AAGAATATCGGCTTCTCTTCCCTTTTGGATATTTGCGTCATTGACCGGGACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp GGGAAGTGCCTGTGTGGATGTGAAGCCACCTTGGGTGGGCGGCTCGGAGCTCCTAGACCATCGATGCTTTaGAAGAATGAAAAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: GKCLCGCEATLGGRLGAPRPSML*KNEKKF
Trigger: AAACTTCTTTTCATTCTTCCAAAGCATCGATGGTCT...AGGAGCTCCGAGCCGCCCACCCAAGGTGGCTTCACATCCACACAGGCACTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CCA 90 bp AGTGGCTGTCAGGCCCTTGTCATGGCTGAGTGGCCACCAGGGTGCGGGTTGGTGAGACCATCGATGCTTTaGAAGAATGAAAAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: SGCQALVMAEWPPGCGLVRPSML*KNEKKF
Trigger: AAACTTCTTTTCATTCTTCCAAAGCATCGATGGTCT...CACCAACCCGCACCCTGGTGGCCACTCAGCCATGACAAGGGCCTGACAGCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp TCTCAGCCCAGCAACGCGAGCTGCCGTCTGTCTTCTAAGGTCAAAGCAGGCGTGCTCCACACGGTGAGATaGAAAATAGGATTTATTGGG +
Preference number: 4 (lower is better)
Translates to: SQPSNASCRLSSKVKAGVLHTVR*KIGFIG
Trigger: CCCAATAAATCCTATTTTCCATCTCACCGTGTGGAG...CACGCCTGCTTTGACCTTAGAAGACAGACGGCAGCTCGCGTTGCTGGGCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp CCAGTCCCGGTCAATGACGCAAATATCCAAAAGGGAAGAGAAGCCGATATTCTTTCTCCCCCTGGGCACTaGCATGGAGATGTGACGGAG +
Preference number: 4 (lower is better)
Translates to: PVPVNDANIQKGREADILSPPGH*HGDVTE
Trigger: CTCCGTCACATCTCCATGCCAGTGCCCAGGGGGAGA...AAGAATATCGGCTTCTCTTCCCTTTTGGATATTTGCGTCATTGACCGGGACTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp CAACAGCATCATCTAAATTCACGTCCATTGGAGAATCTCAGCCCAGCAACGCGAGTCTCCGTCCACTCTTaGTCCAGGTTACGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: QQHHLNSRPLENLSPATRVSVHS*SRLRLG
Trigger: GCCCAGACGTAACCTGGACCAAGAGTGGACGGAGAC...TCGCGTTGCTGGGCTGAGATTCTCCAATGGACGTGAATTTAGATGATGCTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp CTTCAGGGCCGAGAACAGTGCCCAAAGCGCAGCCACTGTGTTGTGTGTCCTCTGTTCATGAGATGTTGTTaGCACTGTCATGTCAAAGGG +
Preference number: 4 (lower is better)
Translates to: LQGREQCPKRSHCVVCPLFMRCC*HCHVKG
Trigger: CCCTTTGACATGACAGTGCCAACAACATCTCATGAA...CAGAGGACACACAACACAGTGGCTGCGCTTTGGGCACTGTTCTCGGCCCTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR TCA 90 bp GAAGCAGGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTCAGGAGAACACGTCTTaGAGCACAGCTGAACTTGAA +
Preference number: 4 (lower is better)
Translates to: EAGTSPNVPRLQDSSIHFQENTS*STAELE
Trigger: TTCAAGTTCAGCTGTGCTTCAAGACGTGTTCTCCTG...AAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCCTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR GCA 90 bp GATTTATTGGGGGAACCGTACAAGCAGAGGAGAAGCAGGGGTGCCCAGGCTGTCCGCGAAGACCATCGATaGTTTGGAAGAATGAAAAGA +
Preference number: 4 (lower is better)
Translates to: DLLGEPYKQRRSRGAQAVREDHR*FGRMKR
Trigger: TCTTTTCATTCTTCCAAAGCATCGATGGTCTTCGCG...GACAGCCTGGGCACCCCTGCTTCTCCTCTGCTTGTACGGTTCCCCCAATAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp GTACAGCAGGGGCGTCCGTGTCCAGGCAGCTTTGTCATGTCTTCCAAAGGTCAGCGCGAAGACCATCGATaGTTTGGAAGAATGAAAAGA +
Preference number: 4 (lower is better)
Translates to: VQQGRPCPGSFVMSSKGQREDHR*FGRMKR
Trigger: TCTTTTCATTCTTCCAAAGCATCGATGGTCTTCGCG...CTGACCTTTGGAAGACATGACAAAGCTGCCTGGACACGGACGCCCCTGCTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR GCA 90 bp ATGTGGTGCAAATGTCATACAGCAGGGTTTGTGGGCGAAGCACCAGCAGAGGCAACACACACCATGTGGTaGAAATGTCATACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: MWCKCHTAGFVGEAPAEATHTMW*KCHTAG
Trigger: CCCTGCTGTATGACATTTGCACCACATGGTGTGTGT...TGCCTCTGCTGGTGCTTCGCCCACAAACCCTGCTGTATGACATTTGCACCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp GTTGTTTTAAGCCCACTACGTTTTGTTGTAATTGGTCATGCACCATTAGATAACCCCGCTGCGCCGTGTTaGGGCGTTTCTCCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: VVLSPLRFVVIGHAPLDNPAAPC*GVSPAA
Trigger: GGCAGCGGGAGAAACGCCCCAACACGGCGCAGCGGG...GTTATCTAATGGTGCATGACCAATTACAACAAAACGTAGTGGGCTTAAAACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000573564.5
CDS-3UTR CCA 90 bp GTTTTAAGCCCACTACGTTTTGTTGTAATTGGTCATGCACCATTAGATAACAAAGAACTCGGGGCCTCCTaGGCTCCCCCGCTGCGCCGT +
Preference number: 4 (lower is better)
Translates to: VLSPLRFVVIGHAPLDNKELGAS*APPLRR
Trigger: ACGGCGCAGCGGGGGAGCCCAGGAGGCCCCGAGTTC...TTTGTTATCTAATGGTGCATGACCAATTACAACAAAACGTAGTGGGCTTAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000573564.5
CDS-3UTR CCA 90 bp GGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACCGCTCCACACGGTGAGATaGAAAATAGGATTTATTGGG +
Preference number: 4 (lower is better)
Translates to: GTSPNVPRLQDSSIHFAPLHTVR*KIGFIG
Trigger: CCCAATAAATCCTATTTTCCATCTCACCGTGTGGAG...CGGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp CCAAGGCAACAGCATCATCTAAATTCACGTCCATTGGAGAATCTCAGCCCAGCAAGTGGGAGTCGGGATTaGAGTACTGGGTCTGTAGCC +
Preference number: 4 (lower is better)
Translates to: PRQQHHLNSRPLENLSPASGSRD*STGSVA
Trigger: GGCTACAGACCCAGTACTCCAATCCCGACTCCCACT...TGCTGGGCTGAGATTCTCCAATGGACGTGAATTTAGATGATGCTGTTGCCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR TCA 90 bp CATCACACACTAGGCTTGGTGACTGCACTTGAGGGACTCACAGGACTTAGCCTACAGGAGAACACGTCTTaGAGCACAGCTGAACTTGAA +
Preference number: 4 (lower is better)
Translates to: HHTLGLVTALEGLTGLSLQENTS*STAELE
Trigger: TTCAAGTTCAGCTGTGCTTCAAGACGTGTTCTCCTG...TAGGCTAAGTCCTGTGAGTCCCTCAAGTGCAGTCACCAAGCCTAGTGTGTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571983.5
CDS-3UTR GCA 90 bp TTAAGCCCACTACGTTTTGTTGTAATTGGTCATGCACCATTAGATAACAAATACCCTGGGCTCCCCCGCTaGGCCGTGTTGGGGCGTTTC +
Preference number: 4 (lower is better)
Translates to: LSPLRFVVIGHAPLDNKYPGLPR*AVLGRF
Trigger: GAAACGCCCCAACACGGCGCAGCGGGGGAGCCCAGG...GTATTTGTTATCTAATGGTGCATGACCAATTACAACAAAACGTAGTGGGCTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000573564.5
CDS-3UTR CCA 90 bp TGGAGGTTGTCAAATGTTTTGTGTCTATTCAGTGATCACACGGTTTTTGTCCTTATGATGCGGTGGCCCTaGGTTATGGCGCGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: WRLSNVLCLFSDHTVFVLMMRWP*VMARLR
Trigger: CCGCAGCCGCGCCATAACCCAGGGCCACCGCATCAT...AAGGACAAAAACCGTGTGATCACTGAATAGACACAAAACATTTGACAACCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571983.5
CDS-3UTR TCA 90 bp GTTGTTTTAAGCCCACTACGTTTTGTTGTAATTGGTCATGCACCATTAGATAACTCGGGCGGGTGGCAGTaGCCACGCATGACAGTCACC +
Preference number: 4 (lower is better)
Translates to: VVLSPLRFVVIGHAPLDNSGGWQ*PRMTVT
Trigger: GGTGACTGTCATGCGTGGTCACTGCCACCCGCCCGA...GTTATCTAATGGTGCATGACCAATTACAACAAAACGTAGTGGGCTTAAAACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573564.5
CDS-3UTR GCA 90 bp TTTGTTGTTTTAAGCCCACTACGTTTTGTTGTAATTGGTCATGCACCATTAGATCCGTCCTGCCCAGCCTaGAGCGTCTCCACGGCCTTC +
Preference number: 4 (lower is better)
Translates to: FVVLSPLRFVVIGHAPLDPSCPA*SVSTAF
Trigger: GAAGGCCGTGGAGACGCTGCAGGCTGGGCAGGACGG...ATCTAATGGTGCATGACCAATTACAACAAAACGTAGTGGGCTTAAAACAACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573564.5
CDS-3UTR GCA 90 bp TTAAGCCCACTACGTTTTGTTGTAATTGGTCATGCACCATTAGATAACAAATACGCGTCCATGTCCTGGTaGTCGTCTGGGGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: LSPLRFVVIGHAPLDNKYASMSW*SSGASG
Trigger: GCCCGAGGCCCCAGACGAGCACCAGGACATGGACGC...GTATTTGTTATCTAATGGTGCATGACCAATTACAACAAAACGTAGTGGGCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573564.5
CDS-3UTR GCA 90 bp GTTGTTTTAAGCCCACTACGTTTTGTTGTAATTGGTCATGCACCATTAGATAACAGGGCCTCCCGGGTCTaGGTCCATGTCCTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: VVLSPLRFVVIGHAPLDNRASRV*VHVLVL
Trigger: GAGCACCAGGACATGGACGCAGACCCGGGAGGCCCT...GTTATCTAATGGTGCATGACCAATTACAACAAAACGTAGTGGGCTTAAAACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573564.5
CDS-3UTR CCA 90 bp GTTTTAAGCCCACTACGTTTTGTTGTAATTGGTCATGCACCATTAGATAACAAAGTCCTGGTGCTCGTCTaGGGCCTCGGGCTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: VLSPLRFVVIGHAPLDNKVLVLV*GLGLGW
Trigger: CCAACCCAGCCCGAGGCCCCAGACGAGCACCAGGAC...TTTGTTATCTAATGGTGCATGACCAATTACAACAAAACGTAGTGGGCTTAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573564.5
CDS-3UTR CCA 90 bp ATTTGTTGTTTTAAGCCCACTACGTTTTGTTGTAATTGGTCATGCACCATTAGAGGGCCGGAGAGGATCTaGGCTGTCCCACTGCGCCAG +
Preference number: 4 (lower is better)
Translates to: ICCFKPTTFCCNWSCTIRGPERI*AVPLRQ
Trigger: CTGGCGCAGTGGGACAGCCCAGATCCTCTCCGGCCC...TCTAATGGTGCATGACCAATTACAACAAAACGTAGTGGGCTTAAAACAACAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573564.5
CDS-3UTR CCA 90 bp CAACAGCATCATCTAAATTCACGTCCATTGGAGAATCTCAGCCCAGCAACGCGAGTTTCTCTCGTATCTTaGGCATGTGGAGAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: QQHHLNSRPLENLSPATRVSLVS*ACGELP
Trigger: GGGAAGCTCTCCACATGCCCAAGATACGAGAGAAAC...TCGCGTTGCTGGGCTGAGATTCTCCAATGGACGTGAATTTAGATGATGCTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR TCA 90 bp TTTGTTGTTTTAAGCCCACTACGTTTTGTTGTAATTGGTCATGCACCATTAGATGGCAGTGACCACGCATaGCAGTCACCCGTCGGCCCT +
Preference number: 4 (lower is better)
Translates to: FVVLSPLRFVVIGHAPLDGSDHA*QSPVGP
Trigger: AGGGCCGACGGGTGACTGTCATGCGTGGTCACTGCC...ATCTAATGGTGCATGACCAATTACAACAAAACGTAGTGGGCTTAAAACAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573564.5
CDS-3UTR CCA 90 bp ATTTGTTGTTTTAAGCCCACTACGTTTTGTTGTAATTGGTCATGCACCATTAGAATGATGCGGTGGCCCTaGGTTATGGCGCGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: ICCFKPTTFCCNWSCTIRMMRWP*VMARLR
Trigger: CCGCAGCCGCGCCATAACCCAGGGCCACCGCATCAT...TCTAATGGTGCATGACCAATTACAACAAAACGTAGTGGGCTTAAAACAACAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573564.5
CDS-3UTR CCA 90 bp ATTTGTTGTTTTAAGCCCACTACGTTTTGTTGTAATTGGTCATGCACCATTAGACCCTCCATATCGGGCTaGTGGCAGTGCCCACGCATC +
Preference number: 4 (lower is better)
Translates to: ICCFKPTTFCCNWSCTIRPSISG*WQCPRI
Trigger: GATGCGTGGGCACTGCCACCAGCCCGATATGGAGGG...TCTAATGGTGCATGACCAATTACAACAAAACGTAGTGGGCTTAAAACAACAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573564.5
CDS-3UTR CCA 90 bp GTTTTAAGCCCACTACGTTTTGTTGTAATTGGTCATGCACCATTAGATAACAAATCTGCGTCCATGTCCTaGTGCTCGTCTGGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: VLSPLRFVVIGHAPLDNKSASMS*CSSGAS
Trigger: CGAGGCCCCAGACGAGCACCAGGACATGGACGCAGA...TTTGTTATCTAATGGTGCATGACCAATTACAACAAAACGTAGTGGGCTTAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000573564.5
CDS-3UTR GCA 90 bp TTAAGCCCACTACGTTTTGTTGTAATTGGTCATGCACCATTAGATAACAAATACGGGGACCCGGACCCCTaGGGTAGAGCAAACTATCCA +
Preference number: 4 (lower is better)
Translates to: LSPLRFVVIGHAPLDNKYGDPDP*GRANYP
Trigger: TGGATAGTTTGCTCTACCGCAGGGGTCCGGGTCCCC...GTATTTGTTATCTAATGGTGCATGACCAATTACAACAAAACGTAGTGGGCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000573564.5
CDS-3UTR CCA 90 bp GTTTTAAGCCCACTACGTTTTGTTGTAATTGGTCATGCACCATTAGATAACAAAATGACCATGATGCGGTaGCCCTGGGTTATGGCGCGG +
Preference number: 4 (lower is better)
Translates to: VLSPLRFVVIGHAPLDNKMTMMR*PWVMAR
Trigger: CCGCGCCATAACCCAGGGCCACCGCATCATGGTCAT...TTTGTTATCTAATGGTGCATGACCAATTACAACAAAACGTAGTGGGCTTAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000573564.5
CDS-3UTR CCA 90 bp CATCACACACTAGGCTTGGTGACTGCACTTGAGGGACTCACAGGACTTAGCCTAATCATGAAAGCGTGTTaGAGGTTGTCAAATGTTTTG +
Preference number: 4 (lower is better)
Translates to: HHTLGLVTALEGLTGLSLIMKAC*RLSNVL
Trigger: CAAAACATTTGACAACCTCCAACACGCTTTCATGAT...TAGGCTAAGTCCTGTGAGTCCCTCAAGTGCAGTCACCAAGCCTAGTGTGTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571983.5
3UTR CAA 72 bp GCCTTGGGGATTTATTTTAAATTTCATGAGATGTTGTaGGCACTGTCATGTCAAAGGGCACGGACACACACC +
Preference number: 4 (lower is better)
Translates to: ALGIYFKFHEML*ALSCQRARTHT
Trigger: GGTGTGTGTCCGTGCCCTTTGACATGACAGTGCCAACAACATCTCATGAAATTTAAAATAAATCCCCAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CCA 90 bp TGGAGGTTGTCAAATGTTTTGTGTCTATTCAGTGATCACACGGTTTTTGTCCTTAACTTGAATCTTTTCTaGGTCCTCCTGCTGGGCCGT +
Preference number: 4 (lower is better)
Translates to: WRLSNVLCLFSDHTVFVLNLNLF*VLLLGR
Trigger: ACGGCCCAGCAGGAGGACCCAGAAAAGATTCAAGTT...AAGGACAAAAACCGTGTGATCACTGAATAGACACAAAACATTTGACAACCTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000571983.5
CDS-3UTR CCA 90 bp TTTGTTGTTTTAAGCCCACTACGTTTTGTTGTAATTGGTCATGCACCATTAGATAACTTGAATCTTTTCTaGGTCCTCCTGCTGGGCCGT +
Preference number: 4 (lower is better)
Translates to: FVVLSPLRFVVIGHAPLDNLNLF*VLLLGR
Trigger: ACGGCCCAGCAGGAGGACCCAGAAAAGATTCAAGTT...ATCTAATGGTGCATGACCAATTACAACAAAACGTAGTGGGCTTAAAACAACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000573564.5
CDS-3UTR CCA 90 bp TGGAGGTTGTCAAATGTTTTGTGTCTATTCAGTGATCACACGGTTTTTGTCCTTTTTTCTCTACTGATCTaGTATGCAGGCATCCCCATC +
Preference number: 4 (lower is better)
Translates to: WRLSNVLCLFSDHTVFVLFSLLI*YAGIPI
Trigger: GATGGGGATGCCTGCATACCAGATCAGTAGAGAAAA...AAGGACAAAAACCGTGTGATCACTGAATAGACACAAAACATTTGACAACCTCCA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000571983.5
CDS-3UTR TCA 90 bp ATTTGTTGTTTTAAGCCCACTACGTTTTGTTGTAATTGGTCATGCACCATTAGACAGGAGAACACGTCTTaGAGCACAGCTGAACTTGAA +
Preference number: 4 (lower is better)
Translates to: ICCFKPTTFCCNWSCTIRQENTS*STAELE
Trigger: TTCAAGTTCAGCTGTGCTTCAAGACGTGTTCTCCTG...TCTAATGGTGCATGACCAATTACAACAAAACGTAGTGGGCTTAAAACAACAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573564.5
CDS-3UTR TCA 90 bp TGGAGGTTGTCAAATGTTTTGTGTCTATTCAGTGATCACACGGTTTTTGTCCTTTTTGTGTCTATTCAGTaGTCACACGGTTTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: WRLSNVLCLFSDHTVFVLFVSIQ*SHGFCP
Trigger: AGGACAAAAACCGTGTGATCACTGAATAGACACAAA...AAGGACAAAAACCGTGTGATCACTGAATAGACACAAAACATTTGACAACCTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000571983.5
CDS GCA 90 bp TCTGCTGCGTCACTCGTCCGTCCCCAGCACCCGCCCAGGCTTGCATaGAGGGTGCGCCGTGCCTGGTTGGTCAGAGGAATGACCCGGGGC +
Preference number: 5 (lower is better)
Translates to: SAASLVRPQHPPRLA*RVRRAWLVRGMTRG
Trigger: GCCCCGGGTCATTCCTCTGACCAACCAGGCACGGCGCACCCTGCATGCAAGCCTGGGCGGGTGCTGGGGACGGACGAGTGACGCAGCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000570752.5
ENST00000571580.1
ENST00000574985.1
CDS-3UTR CAA 90 bp CTGACAGAAGGGGACACGCCTTTGCTGCCCAGGATGGACCTGGGCCACCCAGGACCCCGCTGCGCCGTGTaGGGGCGTTTCTCCCGCTGC +
Preference number: 5 (lower is better)
Translates to: LTEGDTPLLPRMDLGHPGPRCAV*GRFSRC
Trigger: GCAGCGGGAGAAACGCCCCAACACGGCGCAGCGGGG...TCCTGGGTGGCCCAGGTCCATCCTGGGCAGCAAAGGCGTGTCCCCTTCTGTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CAA 90 bp TGGTTTGGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTGGCAGCAGGCGGCCTTTGGCCAGCTCCGGTaGCTGGGGATGGCCACACCC +
Preference number: 5 (lower is better)
Translates to: WFGQLRLLGMATPWQQAAFGQLR*LGMATP
Trigger: GGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAA...GGCCGCCTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS TCA 90 bp TCACGCAAAAGCGGCAGGGACGTTCAAGGGCAGGCTCTGCACCTGTaGCACCACGGAGGCCAGGCTGCCCCTCCGGCGGAGGGAAGCGAC +
Preference number: 5 (lower is better)
Translates to: SRKSGRDVQGQALHL*HHGGQAAPPAEGSD
Trigger: GTCGCTTCCCTCCGCCGGAGGGGCAGCCTGGCCTCCGTGGTGTCACAGGTGCAGAGCCTGCCCTTGAACGTCCCTGCCGCTTTTGCGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570752.5
CDS GCA 90 bp GCGGCCAAGCGTCCCACCTTGCCATGCCTTCAGGGAGGCAGTGTCTaGTGCGTCACTCGTCCGTCCCCAGCACCCGCCCAGGCTTGCATG +
Preference number: 5 (lower is better)
Translates to: AAKRPTLPCLQGGSV*CVTRPSPAPAQACM
Trigger: CATGCAAGCCTGGGCGGGTGCTGGGGACGGACGAGTGACGCAGCAGACACTGCCTCCCTGAAGGCATGGCAAGGTGGGACGCTTGGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574985.1
CDS GCA 90 bp CAGGTGAGGCCCCTGCAGGTGGCGGCCAAGCGTCCCACCTTGCCATaGCTTCAGGGAGGCAGTGTCTGCTGCGTCACTCGTCCGTCCCCA +
Preference number: 5 (lower is better)
Translates to: QVRPLQVAAKRPTLP*LQGGSVCCVTRPSP
Trigger: TGGGGACGGACGAGTGACGCAGCAGACACTGCCTCCCTGAAGGCATGGCAAGGTGGGACGCTTGGCCGCCACCTGCAGGGGCCTCACCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574985.1
CDS CCA 90 bp CTCGGGAGGCAGGAGGACCCTGAGGGGCACAGCAGCACAGGAGCCTaGGGACCACGAGACAGAAGAGGTCAGGACGAAGGTGGGGACGCC +
Preference number: 5 (lower is better)
Translates to: LGRQEDPEGHSSTGA*GPRDRRGQDEGGDA
Trigger: GGCGTCCCCACCTTCGTCCTGACCTCTTCTGTCTCGTGGTCCCCAGGCTCCTGTGCTGCTGTGCCCCTCAGGGTCCTCCTGCCTCCCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570752.5
CDS-3UTR CAA 90 bp CCGGTGGGGTCATCTTGCCTCTCCGGACTGCTCCCTCTGACTGGTGAAGCCACACCCCGCTGCGCCGTGTaGGGGCGTTTCTCCCGCTGC +
Preference number: 5 (lower is better)
Translates to: PVGSSCLSGLLPLTGEATPRCAV*GRFSRC
Trigger: GCAGCGGGAGAAACGCCCCAACACGGCGCAGCGGGG...TGTGGCTTCACCAGTCAGAGGGAGCAGTCCGGAGAGGCAAGATGACCCCACCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS TCA 90 bp CCAGGCTTGCATGCAGGGTGCGCCGTGCCTGGTTGGTCAGAGGAATaGCCCGGGGCCCTCTGGGGACAAAGCTGCTCAGGAGCCGGATGG +
Preference number: 5 (lower is better)
Translates to: PGLHAGCAVPGWSEE*PGALWGQSCSGAGW
Trigger: CCATCCGGCTCCTGAGCAGCTTTGTCCCCAGAGGGCCCCGGGTCATTCCTCTGACCAACCAGGCACGGCGCACCCTGCATGCAAGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000570752.5
ENST00000571580.1
ENST00000574985.1
CDS GCA 90 bp GCCAAGCGTCCCACCTTGCCATGCCTTCAGGGAGGCAGTGTCTGCTaGGTCACTCGTCCGTCCCCAGCACCCGCCCAGGCTTGCATGCAG +
Preference number: 5 (lower is better)
Translates to: AKRPTLPCLQGGSVC*VTRPSPAPAQACMQ
Trigger: CTGCATGCAAGCCTGGGCGGGTGCTGGGGACGGACGAGTGACGCAGCAGACACTGCCTCCCTGAAGGCATGGCAAGGTGGGACGCTTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574985.1
CDS GCA 90 bp GAACTCGGGGCCTCCTTGCCATGCCTTCAGGGAGGCAGTGTCTGCTaGGTCACTCGTCCGTCCCCAGCACCCGCCCAGGCTTGCATGCAG +
Preference number: 5 (lower is better)
Translates to: ELGASLPCLQGGSVC*VTRPSPAPAQACMQ
Trigger: CTGCATGCAAGCCTGGGCGGGTGCTGGGGACGGACGAGTGACGCAGCAGACACTGCCTCCCTGAAGGCATGGCAAGGAGGCCCCGAGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570752.5
ENST00000571580.1
CDS GCA 90 bp CAGGAACTCGGGGCCTCCTTGCCATGCCTTCAGGGAGGCAGTGTCTaGTGCGTCACTCGTCCGTCCCCAGCACCCGCCCAGGCTTGCATG +
Preference number: 5 (lower is better)
Translates to: QELGASLPCLQGGSV*CVTRPSPAPAQACM
Trigger: CATGCAAGCCTGGGCGGGTGCTGGGGACGGACGAGTGACGCAGCAGACACTGCCTCCCTGAAGGCATGGCAAGGAGGCCCCGAGTTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570752.5
ENST00000571580.1
CDS CCA 90 bp CCAGAGGATACCCTTTCCTCCGTGCAGGCTCAGGGGCCACAGAGGTaGGGAGGTGGCCTGGGGCATCGTGGACACATCGGGTGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: PEDTLSSVQAQGPQR*GGGLGHRGHIGWQW
Trigger: CCACTGCCACCCGATGTGTCCACGATGCCCCAGGCCACCTCCCCACCTCTGTGGCCCCTGAGCCTGCACGGAGGAAAGGGTATCCTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570752.5
CDS-3UTR CAA 90 bp AGTGGCTGTCAGGCCCTTGTCATGGCTGAGTGGCCACCAGGGTGCGGGTTGGTGGTGGAGGGCGCAGGCTaGGCAGGTAGCAGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: SGCQALVMAEWPPGCGLVVEGAG*AGSRGC
Trigger: GCAGCCTCTGCTACCTGCCAAGCCTGCGCCCTCCAC...CACCAACCCGCACCCTGGTGGCCACTCAGCCATGACAAGGGCCTGACAGCCACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS GCA 90 bp GTCCTGGATGTGGTGAGAGGGAGGACCTGGCGGGTGGCTGTGCCTTaGCCAGAGGATACCCTTTCCTCCGTGCAGGCTCAGGGGCCACAG +
Preference number: 5 (lower is better)
Translates to: VLDVVRGRTWRVAVP*PEDTLSSVQAQGPQ
Trigger: CTGTGGCCCCTGAGCCTGCACGGAGGAAAGGGTATCCTCTGGGCAAGGCACAGCCACCCGCCAGGTCCTCCCTCTCACCACATCCAGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570752.5
ENST00000574985.1
CDS-3UTR CAA 90 bp GGGAAGTGCCTGTGTGGATGTGAAGCCACCTTGGGTGGGCGGCTCGGAGCTCCTGGATGTGAAGCCACCTaGGGTGGGCGGCTCGGAGCT +
Preference number: 5 (lower is better)
Translates to: GKCLCGCEATLGGRLGAPGCEAT*GGRLGA
Trigger: AGCTCCGAGCCGCCCACCCAAGGTGGCTTCACATCC...AGGAGCTCCGAGCCGCCCACCCAAGGTGGCTTCACATCCACACAGGCACTTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CAA 90 bp CCTCGCCAGGTGGAAAGCCCTAGGAAGGCTGCGTGCTCTGCAAACCCAGGGGTGTTTGGCCAGCTCCGGTaGCTGGGGATGGCCACACCC +
Preference number: 5 (lower is better)
Translates to: PRQVESPRKAACSANPGVFGQLR*LGMATP
Trigger: GGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAA...CACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGGGCTTTCCACCTGGCGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CAA 90 bp AGTGGCTGTCAGGCCCTTGTCATGGCTGAGTGGCCACCAGGGTGCGGGTTGGTGAGCGAGGCCTCTGGTTaGGCCAGCTCCGGTTGCTGG +
Preference number: 5 (lower is better)
Translates to: SGCQALVMAEWPPGCGLVSEASG*ASSGCW
Trigger: CCAGCAACCGGAGCTGGCCAAACCAGAGGCCTCGCT...CACCAACCCGCACCCTGGTGGCCACTCAGCCATGACAAGGGCCTGACAGCCACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp CCCCAACCCCAGGTGTCTCCGTCCACTCTTGGTCCAGGTTACGTCTGGGCCAGGTGGGCAAGTCTGCCCTaGGCCCAGGGGTGCCACTTG +
Preference number: 5 (lower is better)
Translates to: PQPQVSPSTLGPGYVWARWASLP*AQGCHL
Trigger: CAAGTGGCACCCCTGGGCCAAGGGCAGACTTGCCCA...CCTGGCCCAGACGTAACCTGGACCAAGAGTGGACGGAGACACCTGGGGTTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS TCA 90 bp CCAGGCTGCCCCTCCGGCGGAGGGAAGCGACAGACATTTCAGACATaGAAGGCCTCAACGTGCTACCTCCCGGGACCGGCCCAGGAAACG +
Preference number: 5 (lower is better)
Translates to: PGCPSGGGKRQTFQT*KASTCYLPGPAQET
Trigger: CGTTTCCTGGGCCGGTCCCGGGAGGTAGCACGTTGAGGCCTTTCATGTCTGAAATGTCTGTCGCTTCCCTCCGCCGGAGGGGCAGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570752.5
CDS CCA 90 bp CAGGGAGCAGCGTCCACTGTCCTGGATGTGGTGAGAGGGAGGACCTaGCGGGTGGCTGTGCCTTGCCCAGAGGATACCCTTTCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: QGAASTVLDVVRGRT*RVAVPCPEDTLSSV
Trigger: CACGGAGGAAAGGGTATCCTCTGGGCAAGGCACAGCCACCCGCCAGGTCCTCCCTCTCACCACATCCAGGACAGTGGACGCTGCTCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570752.5
ENST00000574985.1
CDS CCA 90 bp GAGGGGAGGAGCAGCGGACACCAGCTCTCAGAGCCCAGATCAGCATaGCCCCGAGATGAGACCTCCCACAACGCCCACACCTCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: EGRSSGHQLSEPRSA*PRDETSHNAHTSSS
Trigger: TGAGGAGGAGGTGTGGGCGTTGTGGGAGGTCTCATCTCGGGGCCATGCTGATCTGGGCTCTGAGAGCTGGTGTCCGCTGCTCCTCCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574985.1
CDS-3UTR CAA 90 bp TGTGGAGTGCGGAGCGAGGCCTCTGGTTTGGCCAGCTCCGGTTGCTGGGGATGGCACCCCATCCTCATCTaGGTCGGAGGCTGTGAGCAG +
Preference number: 5 (lower is better)
Translates to: CGVRSEASGLASSGCWGWHPILI*VGGCEQ
Trigger: CTGCTCACAGCCTCCGACCAAGATGAGGATGGGGTG...CCATCCCCAGCAACCGGAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp TGTGGAGTGCGGAGCGAGGCCTCTGGTTTGGCCAGCTCCGGTTGCTGGGGATGGAGAGATTGGTGTGGGTaGACCTGGCCTATGCGGGGC +
Preference number: 5 (lower is better)
Translates to: CGVRSEASGLASSGCWGWRDWCG*TWPMRG
Trigger: GCCCCGCATAGGCCAGGTCAACCCACACCAATCTCT...CCATCCCCAGCAACCGGAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CAA 90 bp TGGAAAGCCCTAGGAAGGCTGCGTGCTCTGCAAACCCAGGGGTGCTGTGGCCGTAGCGAGGCCTCTGGTTaGGCCAGCTCCGGTTGCTGG +
Preference number: 5 (lower is better)
Translates to: WKALGRLRALQTQGCCGRSEASG*ASSGCW
Trigger: CCAGCAACCGGAGCTGGCCAAACCAGAGGCCTCGCT...ACGGCCACAGCACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGGGCTTTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CAA 90 bp GTGGAAAGCCCTAGGAAGGCTGCGTGCTCTGCAAACCCAGGGGTGCTGTGGCCGGCCCAGGGGTGCCACTaGCCCAGGCTTATGCAGATG +
Preference number: 5 (lower is better)
Translates to: VESPRKAACSANPGVLWPAQGCH*PRLMQM
Trigger: CATCTGCATAAGCCTGGGCAAGTGGCACCCCTGGGC...CGGCCACAGCACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGGGCTTTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp CGCCCTGCCCCACGACAGCTGCGTCTGCAAGCGCCAGCTCTGAGCACTGTTCTCACTGGGTCTGTAGCCTaGGCCATGAGTCCAGCTGGG +
Preference number: 5 (lower is better)
Translates to: RPAPRQLRLQAPALSTVLTGSVA*AMSPAG
Trigger: CCCAGCTGGACTCATGGCCAAGGCTACAGACCCAGT...GAGAACAGTGCTCAGAGCTGGCGCTTGCAGACGCAGCTGTCGTGGGGCAGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp CCAGGGGTGCTGTGGCCGTACAGCAGGGGCGTCCGTGTCCAGGCAGCTTTGTCAGCGGGGCAGCTCAGTTaGAAGCAGGAACTTCCCCAA +
Preference number: 5 (lower is better)
Translates to: PGVLWPYSRGVRVQAALSAGQLS*KQELPQ
Trigger: TTGGGGAAGTTCCTGCTTCAAACTGAGCTGCCCCGC...TGACAAAGCTGCCTGGACACGGACGCCCCTGCTGTACGGCCACAGCACCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CAA 90 bp TGTGGAGTGCGGAGCGAGGCCTCTGGTTTGGCCAGCTCCGGTTGCTGGGGATGGGCGGGGCAGCTCAGTTaGAAGCAGGAACTTCCCCAA +
Preference number: 5 (lower is better)
Translates to: CGVRSEASGLASSGCWGWAGQLS*KQELPQ
Trigger: TTGGGGAAGTTCCTGCTTCAAACTGAGCTGCCCCGC...CCATCCCCAGCAACCGGAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CAA 90 bp AGTGGCTGTCAGGCCCTTGTCATGGCTGAGTGGCCACCAGGGTGCGGGTTGGTGAGAGATTGGTGTGGGTaGACCTGGCCTATGCGGGGC +
Preference number: 5 (lower is better)
Translates to: SGCQALVMAEWPPGCGLVRDWCG*TWPMRG
Trigger: GCCCCGCATAGGCCAGGTCAACCCACACCAATCTCT...CACCAACCCGCACCCTGGTGGCCACTCAGCCATGACAAGGGCCTGACAGCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp GGACCATCTTTCAGCAAGTACCTTCCTCGGGCATGGCTGCCTCCTGTGGGCGTACCCGGTGGGGTCATCTaGCCTCTCCGGACTGCTCCC +
Preference number: 5 (lower is better)
Translates to: GPSFSKYLPRAWLPPVGVPGGVI*PLRTAP
Trigger: GGGAGCAGTCCGGAGAGGCAAGATGACCCCACCGGG...TACGCCCACAGGAGGCAGCCATGCCCGAGGAAGGTACTTGCTGAAAGATGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp CCTGTCCAGAAGAGATTGGTGTGGGTTGACCTGGCCTATGCGGGGCAGCTCAGTCCCGGTGGGGTCATCTaGCCTCTCCGGACTGCTCCC +
Preference number: 5 (lower is better)
Translates to: PVQKRLVWVDLAYAGQLSPGGVI*PLRTAP
Trigger: GGGAGCAGTCCGGAGAGGCAAGATGACCCCACCGGG...ACTGAGCTGCCCCGCATAGGCCAGGTCAACCCACACCAATCTCTTCTGGACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CAA 90 bp CGCCCTGCCCCACGACAGCTGCGTCTGCAAGCGCCAGCTCTGAGCACTGTTCTCGCTGCGGACAGGTCCTaGTTAGTAAGGAGGAGGCTC +
Preference number: 5 (lower is better)
Translates to: RPAPRQLRLQAPALSTVLAADRS*LVRRRL
Trigger: GAGCCTCCTCCTTACTAACAAGGACCTGTCCGCAGC...GAGAACAGTGCTCAGAGCTGGCGCTTGCAGACGCAGCTGTCGTGGGGCAGGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CAA 90 bp CCTGGACTGGCTCCCATCTCGGGAATGACGCCTGCCGTGGGAATCGTGGAGAGGCAGGCTGTCACAGCCTaGCAGTGCATGGTGGGTTCC +
Preference number: 5 (lower is better)
Translates to: PGLAPISGMTPAVGIVERQAVTA*QCMVGS
Trigger: GGAACCCACCATGCACTGCAAGGCTGTGACAGCCTG...CCTCTCCACGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAGCCAGTCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CAA 90 bp CCTCGCCAGGTGGAAAGCCCTAGGAAGGCTGCGTGCTCTGCAAACCCAGGGGTGCAGGCTGTCACAGCCTaGCAGTGCATGGTGGGTTCC +
Preference number: 5 (lower is better)
Translates to: PRQVESPRKAACSANPGVQAVTA*QCMVGS
Trigger: GGAACCCACCATGCACTGCAAGGCTGTGACAGCCTG...CACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGGGCTTTCCACCTGGCGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CAA 90 bp CAGCCTCGGGGCAGGATGCTTCAGGGCCGAGAACAGTGCCCAAAGCGCAGCCACCACGGCGGCCAACTGTaGCTGCAAGAGGGATGTGAA +
Preference number: 5 (lower is better)
Translates to: QPRGRMLQGREQCPKRSHHGGQL*LQEGCE
Trigger: TTCACATCCCTCTTGCAGCAACAGTTGGCCGCCGTG...GTGGCTGCGCTTTGGGCACTGTTCTCGGCCCTGAAGCATCCTGCCCCGAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp CTGACAGAAGGGGACACGCCTTTGCTGCCCAGGATGGACCTGGGCCACCCAGGAACTGGGTCTGTAGCCTaGGCCATGAGTCCAGCTGGG +
Preference number: 5 (lower is better)
Translates to: LTEGDTPLLPRMDLGHPGTGSVA*AMSPAG
Trigger: CCCAGCTGGACTCATGGCCAAGGCTACAGACCCAGT...TCCTGGGTGGCCCAGGTCCATCCTGGGCAGCAAAGGCGTGTCCCCTTCTGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp CCAGGGGTGCTGTGGCCGTACAGCAGGGGCGTCCGTGTCCAGGCAGCTTTGTCACAGTGGGAGTCGGGATaGGAGTACTGGGTCTGTAGC +
Preference number: 5 (lower is better)
Translates to: PGVLWPYSRGVRVQAALSQWESG*EYWVCS
Trigger: GCTACAGACCCAGTACTCCAATCCCGACTCCCACTG...TGACAAAGCTGCCTGGACACGGACGCCCCTGCTGTACGGCCACAGCACCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp TCTCAGCCCAGCAACGCGAGCTGCCGTCTGTCTTCTAAGGTCAAAGCAGGCGTGCCACCAGGGTGCGGGTaGGTGGCCATGAAGCCACCC +
Preference number: 5 (lower is better)
Translates to: SQPSNASCRLSSKVKAGVPPGCG*VAMKPP
Trigger: GGGTGGCTTCATGGCCACCAACCCGCACCCTGGTGG...CACGCCTGCTTTGACCTTAGAAGACAGACGGCAGCTCGCGTTGCTGGGCTGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp TCTGATTCGCCTCATACCCGCTTAGGGGTGCCCAGAGCAGGGCATGGCATCATGCCACCAGGGTGCGGGTaGGTGGCCATGAAGCCACCC +
Preference number: 5 (lower is better)
Translates to: SDSPHTRLGVPRAGHGIMPPGCG*VAMKPP
Trigger: GGGTGGCTTCATGGCCACCAACCCGCACCCTGGTGG...CATGATGCCATGCCCTGCTCTGGGCACCCCTAAGCGGGTATGAGGCGAATCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS CCA 90 bp AAACCTAGGTGGATGGGAAGTGCCTGTGTGGATGTGAAGCCACCTTaGGTGGGCGGCTCGGAGCTCCTCTGCCCACATCGCCTCACTGGG +
Preference number: 5 (lower is better)
Translates to: KPRWMGSACVDVKPP*VGGSELLCPHRLTG
Trigger: CCCAGTGAGGCGATGTGGGCAGAGGAGCTCCGAGCCGCCCACCCAAGGTGGCTTCACATCCACACAGGCACTTCCCATCCACCTAGGTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000570752.5
ENST00000574985.1
CDS-3UTR CAA 90 bp TGCCCAGGCTGTCACAGCCTTGCAGTGCATGGTGGGTTCCGTGGCCAACTTGCCCACCCCATCCTCATCTaGGTCGGAGGCTGTGAGCAG +
Preference number: 5 (lower is better)
Translates to: CPGCHSLAVHGGFRGQLAHPILI*VGGCEQ
Trigger: CTGCTCACAGCCTCCGACCAAGATGAGGATGGGGTG...GGCAAGTTGGCCACGGAACCCACCATGCACTGCAAGGCTGTGACAGCCTGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp TGTGGTTTCACGGCGGCCAACTGTTGCTGCAAGAGGGATGTGAACAAGTACCAGCCCCGCTGCGCCGTGTaGGGGCGTTTCTCCCGCTGC +
Preference number: 5 (lower is better)
Translates to: CGFTAANCCCKRDVNKYQPRCAV*GRFSRC
Trigger: GCAGCGGGAGAAACGCCCCAACACGGCGCAGCGGGG...CTGGTACTTGTTCACATCCCTCTTGCAGCAACAGTTGGCCGCCGTGAAACCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp GTCCAGCTGGGGGCAGTTAGGTCAGCCTCGGGGCAGGATGCTTCAGGGCCGAGAACAGCAGCATTCACTTaGCACCGTGCTGAGCAGAGC +
Preference number: 5 (lower is better)
Translates to: VQLGAVRSASGQDASGPRTAAFT*HRAEQS
Trigger: GCTCTGCTCAGCACGGTGCAAAGTGAATGCTGCTGT...TCTCGGCCCTGAAGCATCCTGCCCCGAGGCTGACCTAACTGCCCCCAGCTGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp GGGAAGTGCCTGTGTGGATGTGAAGCCACCTTGGGTGGGCGGCTCGGAGCTCCTGCGGGGCAGCTCAGTTaGAAGCAGGAACTTCCCCAA +
Preference number: 5 (lower is better)
Translates to: GKCLCGCEATLGGRLGAPAGQLS*KQELPQ
Trigger: TTGGGGAAGTTCCTGCTTCAAACTGAGCTGCCCCGC...AGGAGCTCCGAGCCGCCCACCCAAGGTGGCTTCACATCCACACAGGCACTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CAA 90 bp GGAAGTGCCTGTGTGGATGTGAAGCCACCTTGGGTGGGCGGCTCGGAGCTCCTCCCTGTCCAGAAGAGATaGGTGTGGGTTGACCTGGCC +
Preference number: 5 (lower is better)
Translates to: GSACVDVKPPWVGGSELLPVQKR*VWVDLA
Trigger: GGCCAGGTCAACCCACACCAATCTCTTCTGGACAGG...GAGGAGCTCCGAGCCGCCCACCCAAGGTGGCTTCACATCCACACAGGCACTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CAA 90 bp CCCTGGACTGGCTCCCATCTCGGGAATGACGCCTGCCGTGGGAATCGTGGAGAGCCTGTCCAGAAGAGATaGGTGTGGGTTGACCTGGCC +
Preference number: 5 (lower is better)
Translates to: PWTGSHLGNDACRGNRGEPVQKR*VWVDLA
Trigger: GGCCAGGTCAACCCACACCAATCTCTTCTGGACAGG...CTCTCCACGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAGCCAGTCCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CAA 90 bp CCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACCGTGCTGAGCAGCGAGGCCTCTGGTTaGGCCAGCTCCGGTTGCTGG +
Preference number: 5 (lower is better)
Translates to: PKRAQAPRQQHSLCTVLSSEASG*ASSGCW
Trigger: CCAGCAACCGGAGCTGGCCAAACCAGAGGCCTCGCT...GCTCAGCACGGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CAA 90 bp ACCCAGCACCTGTCCAGAAGAGATTGGTGTGGGTTGACCTGGCCTATGCGGGGCGAAGGGGACACGCCTTaGCTGCCCAGGATGGACCTG +
Preference number: 5 (lower is better)
Translates to: TQHLSRRDWCGLTWPMRGEGDTP*LPRMDL
Trigger: CAGGTCCATCCTGGGCAGCAAAGGCGTGTCCCCTTC...GCCCCGCATAGGCCAGGTCAACCCACACCAATCTCTTCTGGACAGGTGCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CAA 90 bp TGCCCAGGCTGTCACAGCCTTGCAGTGCATGGTGGGTTCCGTGGCCAACTTGCCCAGGCTGTCACAGCCTaGCAGTGCATGGTGGGTTCC +
Preference number: 5 (lower is better)
Translates to: CPGCHSLAVHGGFRGQLAQAVTA*QCMVGS
Trigger: GGAACCCACCATGCACTGCAAGGCTGTGACAGCCTG...GGCAAGTTGGCCACGGAACCCACCATGCACTGCAAGGCTGTGACAGCCTGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CAA 90 bp CTCTGGTTTGGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTGGCAGCAGGCGCGTTTCTCTCGTATCTaGGGCATGTGGAGAGCTTCC +
Preference number: 5 (lower is better)
Translates to: LWFGQLRLLGMATPWQQARFSRI*GMWRAS
Trigger: GGAAGCTCTCCACATGCCCAAGATACGAGAGAAACG...CGCCTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp GGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACCGGTGGAGGGCGCAGGCTaGGCAGGTAGCAGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: GTSPNVPRLQDSSIHFAPVEGAG*AGSRGC
Trigger: GCAGCCTCTGCTACCTGCCAAGCCTGCGCCCTCCAC...CGGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp GGGAAGTGCCTGTGTGGATGTGAAGCCACCTTGGGTGGGCGGCTCGGAGCTCCTGGTGGCCCTGGAACTTaGCAAGGGGAAGGCTCTGAA +
Preference number: 5 (lower is better)
Translates to: GKCLCGCEATLGGRLGAPGGPGT*QGEGSE
Trigger: TTCAGAGCCTTCCCCTTGCAAAGTTCCAGGGCCACC...AGGAGCTCCGAGCCGCCCACCCAAGGTGGCTTCACATCCACACAGGCACTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp CCTGGACTGGCTCCCATCTCGGGAATGACGCCTGCCGTGGGAATCGTGGAGAGGGGTGGCCCTGGAACTTaGCAAGGGGAAGGCTCTGAA +
Preference number: 5 (lower is better)
Translates to: PGLAPISGMTPAVGIVERGGPGT*QGEGSE
Trigger: TTCAGAGCCTTCCCCTTGCAAAGTTCCAGGGCCACC...CCTCTCCACGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAGCCAGTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp CCCTGGACTGGCTCCCATCTCGGGAATGACGCCTGCCGTGGGAATCGTGGAGAGACAGCAGCATTCACTTaGCACCGTGCTGAGCAGAGC +
Preference number: 5 (lower is better)
Translates to: PWTGSHLGNDACRGNRGETAAFT*HRAEQS
Trigger: GCTCTGCTCAGCACGGTGCAAAGTGAATGCTGCTGT...CTCTCCACGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAGCCAGTCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CAA 90 bp ACAGAAAGGAAAGTGTGGAGTGCGGAGCGAGGCCTCTGGTTTGGCCAGCTCCGGAGAGATTGGTGTGGGTaGACCTGGCCTATGCGGGGC +
Preference number: 5 (lower is better)
Translates to: TERKVWSAERGLWFGQLRRDWCG*TWPMRG
Trigger: GCCCCGCATAGGCCAGGTCAACCCACACCAATCTCT...CCGGAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTTTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CAA 90 bp GGATTTATTGGGGGAACCGTACAAGCAGAGGAGAAGCAGGGGTGCCCAGGCTGTTTTGGCCAGCTCCGGTaGCTGGGGATGGCCACACCC +
Preference number: 5 (lower is better)
Translates to: GFIGGTVQAEEKQGCPGCFGQLR*LGMATP
Trigger: GGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAA...ACAGCCTGGGCACCCCTGCTTCTCCTCTGCTTGTACGGTTCCCCCAATAAATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CAA 90 bp CGTCCATTGGAGAATCTCAGCCCAGCAACGCGAGCTGCCGTCTGTCTTCTAAGGAGCGAGGCCTCTGGTTaGGCCAGCTCCGGTTGCTGG +
Preference number: 5 (lower is better)
Translates to: RPLENLSPATRAAVCLLRSEASG*ASSGCW
Trigger: CCAGCAACCGGAGCTGGCCAAACCAGAGGCCTCGCT...CCTTAGAAGACAGACGGCAGCTCGCGTTGCTGGGCTGAGATTCTCCAATGGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp AAGCCACACTCTGTGAAGCTGTCTGACAGAAGGGGACACGCCTTTGCTGCCCAGTGGGCAAGTCTGCCCTaGGCCCAGGGGTGCCACTTG +
Preference number: 5 (lower is better)
Translates to: KPHSVKLSDRRGHAFAAQWASLP*AQGCHL
Trigger: CAAGTGGCACCCCTGGGCCAAGGGCAGACTTGCCCA...CTGGGCAGCAAAGGCGTGTCCCCTTCTGTCAGACAGCTTCACAGAGTGTGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp CCAGGGGTGCTGTGGCCGTACAGCAGGGGCGTCCGTGTCCAGGCAGCTTTGTCACGTTTCTCTCGTATCTaGGGCATGTGGAGAGCTTCC +
Preference number: 5 (lower is better)
Translates to: PGVLWPYSRGVRVQAALSRFSRI*GMWRAS
Trigger: GGAAGCTCTCCACATGCCCAAGATACGAGAGAAACG...TGACAAAGCTGCCTGGACACGGACGCCCCTGCTGTACGGCCACAGCACCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp AAGCAGGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGTCCTCCAGGGCCGGCTaGCTCAGCACCAGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: KQELPQTCPGSKTAAFTLSSRAG*LSTSPG
Trigger: TCCTGGGCTGGTGCTGAGCAAGCCGGCCCTGGAGGA...CAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCCTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp CTCTGGTTTGGCCAGCTCCGGTTGCTGGGGATGGCCACACCCTGGCAGCAGGCGGAAGCACAGCTGAACTaGAATCTTTTCTGGGTCCTC +
Preference number: 5 (lower is better)
Translates to: LWFGQLRLLGMATPWQQAEAQLN*NLFWVL
Trigger: GAGGACCCAGAAAAGATTCAAGTTCAGCTGTGCTTC...CGCCTGCTGCCAGGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAACCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CAA 90 bp CAGGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACTTTGGCCAGCTCCGGTaGCTGGGGATGGCCACACCC +
Preference number: 5 (lower is better)
Translates to: QELPQTCPGSKTAAFTLHFGQLR*LGMATP
Trigger: GGGTGTGGCCATCCCCAGCAACCGGAGCTGGCCAAA...GTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CAA 90 bp AAGGAGCACAGAAAGGAAAGTGTGGAGTGCGGAGCGAGGCCTCTGGTTTGGCCAGAAGGGGACACGCCTTaGCTGCCCAGGATGGACCTG +
Preference number: 5 (lower is better)
Translates to: KEHRKESVECGARPLVWPEGDTP*LPRMDL
Trigger: CAGGTCCATCCTGGGCAGCAAAGGCGTGTCCCCTTC...TGGCCAAACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTTTCTGTGCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CAA 90 bp TGTGGTTTCACGGCGGCCAACTGTTGCTGCAAGAGGGATGTGAACAAGTACCAGCCCGGTGGGGTCATCTaGCCTCTCCGGACTGCTCCC +
Preference number: 5 (lower is better)
Translates to: CGFTAANCCCKRDVNKYQPGGVI*PLRTAP
Trigger: GGGAGCAGTCCGGAGAGGCAAGATGACCCCACCGGG...CTGGTACTTGTTCACATCCCTCTTGCAGCAACAGTTGGCCGCCGTGAAACCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp ACAGAAAGGAAAGTGTGGAGTGCGGAGCGAGGCCTCTGGTTTGGCCAGCTCCGGTGTCTCCGTCCACTCTaGGTCCAGGTTACGTCTGGG +
Preference number: 5 (lower is better)
Translates to: TERKVWSAERGLWFGQLRCLRPL*VQVTSG
Trigger: CCCAGACGTAACCTGGACCAAGAGTGGACGGAGACA...CCGGAGCTGGCCAAACCAGAGGCCTCGCTCCGCACTCCACACTTTCCTTTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp CCTGGCCTATGCGGGGCAGCTCAGTTTGAAGCAGGAACTTCCCCAAACGTGCCCCAGTGGGAGTCGGGATaGGAGTACTGGGTCTGTAGC +
Preference number: 5 (lower is better)
Translates to: PGLCGAAQFEAGTSPNVPQWESG*EYWVCS
Trigger: GCTACAGACCCAGTACTCCAATCCCGACTCCCACTG...GGGCACGTTTGGGGAAGTTCCTGCTTCAAACTGAGCTGCCCCGCATAGGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp TCTGATTCGCCTCATACCCGCTTAGGGGTGCCCAGAGCAGGGCATGGCATCATGGTGAGCAGCACCAGTTaGGAGAACTCCCTGGGCTTC +
Preference number: 5 (lower is better)
Translates to: SDSPHTRLGVPRAGHGIMVSSTS*ENSLGF
Trigger: GAAGCCCAGGGAGTTCTCCAAACTGGTGCTGCTCAC...CATGATGCCATGCCCTGCTCTGGGCACCCCTAAGCGGGTATGAGGCGAATCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp TGGCCGTACAGCAGGGGCGTCCGTGTCCAGGCAGCTTTGTCATGTCTTCCAAAGGTGAGCAGCACCAGTTaGGAGAACTCCCTGGGCTTC +
Preference number: 5 (lower is better)
Translates to: WPYSRGVRVQAALSCLPKVSSTS*ENSLGF
Trigger: GAAGCCCAGGGAGTTCTCCAAACTGGTGCTGCTCAC...CTTTGGAAGACATGACAAAGCTGCCTGGACACGGACGCCCCTGCTGTACGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp AATTCACGTCCATTGGAGAATCTCAGCCCAGCAACGCGAGCTGCCGTCTGTCTTGGATGTGAAGCCACCTaGGGTGGGCGGCTCGGAGCT +
Preference number: 5 (lower is better)
Translates to: NSRPLENLSPATRAAVCLGCEAT*GGRLGA
Trigger: AGCTCCGAGCCGCCCACCCAAGGTGGCTTCACATCC...AAGACAGACGGCAGCTCGCGTTGCTGGGCTGAGATTCTCCAATGGACGTGAATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp AAGCAGGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGGGATGTGAAGCCACCTaGGGTGGGCGGCTCGGAGCT +
Preference number: 5 (lower is better)
Translates to: KQELPQTCPGSKTAAFTLGCEAT*GGRLGA
Trigger: AGCTCCGAGCCGCCCACCCAAGGTGGCTTCACATCC...CAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCCTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CAA 90 bp ACCCAGCACCTGTCCAGAAGAGATTGGTGTGGGTTGACCTGGCCTATGCGGGGCACAGCAGCATTCACTTaGCACCGTGCTGAGCAGAGC +
Preference number: 5 (lower is better)
Translates to: TQHLSRRDWCGLTWPMRGTAAFT*HRAEQS
Trigger: GCTCTGCTCAGCACGGTGCAAAGTGAATGCTGCTGT...GCCCCGCATAGGCCAGGTCAACCCACACCAATCTCTTCTGGACAGGTGCTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CAA 90 bp CTGTCCAGAAGAGATTGGTGTGGGTTGACCTGGCCTATGCGGGGCAGCTCAGTTAGAGATTGGTGTGGGTaGACCTGGCCTATGCGGGGC +
Preference number: 5 (lower is better)
Translates to: LSRRDWCGLTWPMRGSSVRDWCG*TWPMRG
Trigger: GCCCCGCATAGGCCAGGTCAACCCACACCAATCTCT...AACTGAGCTGCCCCGCATAGGCCAGGTCAACCCACACCAATCTCTTCTGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CAA 90 bp TGGCCGTACAGCAGGGGCGTCCGTGTCCAGGCAGCTTTGTCATGTCTTCCAAAGCCTGTCCAGAAGAGATaGGTGTGGGTTGACCTGGCC +
Preference number: 5 (lower is better)
Translates to: WPYSRGVRVQAALSCLPKPVQKR*VWVDLA
Trigger: GGCCAGGTCAACCCACACCAATCTCTTCTGGACAGG...CTTTGGAAGACATGACAAAGCTGCCTGGACACGGACGCCCCTGCTGTACGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CAA 90 bp TTAGTAAGGAGGAGGCTCTGCAGTCCCGGTGGGGTCATCTTGCCTCTCCGGACTTGTCTCCGTCCACTCTaGGTCCAGGTTACGTCTGGG +
Preference number: 5 (lower is better)
Translates to: LVRRRLCSPGGVILPLRTCLRPL*VQVTSG
Trigger: CCCAGACGTAACCTGGACCAAGAGTGGACGGAGACA...AGTCCGGAGAGGCAAGATGACCCCACCGGGACTGCAGAGCCTCCTCCTTACTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp CCTGTCCAGAAGAGATTGGTGTGGGTTGACCTGGCCTATGCGGGGCAGCTCAGTAGCGCAGCCACTGTGTaGTGTGTCCTCTGCCATAGG +
Preference number: 5 (lower is better)
Translates to: PVQKRLVWVDLAYAGQLSSAATV*CVLCHR
Trigger: CCTATGGCAGAGGACACACAACACAGTGGCTGCGCT...ACTGAGCTGCCCCGCATAGGCCAGGTCAACCCACACCAATCTCTTCTGGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS CCA 90 bp CTGGGAGGTTCCAGCAACCTGCGGTTGTGGATGATCGGATCCAGGTaGGGTCGACCTGGACACACAAAAGCAGGCAAACAAACGCAGCAG +
Preference number: 5 (lower is better)
Translates to: LGGSSNLRLWMIGSR*GRPGHTKAGKQTQQ
Trigger: CTGCTGCGTTTGTTTGCCTGCTTTTGTGTGTCCAGGTCGACCCCACCTGGATCCGATCATCCACAACCGCAGGTTGCTGGAACCTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570752.5
CDS-3UTR CAA 90 bp CCCCAACCCCAGGTGTCTCCGTCCACTCTTGGTCCAGGTTACGTCTGGGCCAGGGAAGCACAGCTGAACTaGAATCTTTTCTGGGTCCTC +
Preference number: 5 (lower is better)
Translates to: PQPQVSPSTLGPGYVWAREAQLN*NLFWVL
Trigger: GAGGACCCAGAAAAGATTCAAGTTCAGCTGTGCTTC...CCTGGCCCAGACGTAACCTGGACCAAGAGTGGACGGAGACACCTGGGGTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp CCCTGGACTGGCTCCCATCTCGGGAATGACGCCTGCCGTGGGAATCGTGGAGAGGAAGCACAGCTGAACTaGAATCTTTTCTGGGTCCTC +
Preference number: 5 (lower is better)
Translates to: PWTGSHLGNDACRGNRGEEAQLN*NLFWVL
Trigger: GAGGACCCAGAAAAGATTCAAGTTCAGCTGTGCTTC...CTCTCCACGATTCCCACGGCAGGCGTCATTCCCGAGATGGGAGCCAGTCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CAA 90 bp GGATTTATTGGGGGAACCGTACAAGCAGAGGAGAAGCAGGGGTGCCCAGGCTGTGCGGGGCAGCTCAGTTaGAAGCAGGAACTTCCCCAA +
Preference number: 5 (lower is better)
Translates to: GFIGGTVQAEEKQGCPGCAGQLS*KQELPQ
Trigger: TTGGGGAAGTTCCTGCTTCAAACTGAGCTGCCCCGC...ACAGCCTGGGCACCCCTGCTTCTCCTCTGCTTGTACGGTTCCCCCAATAAATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CAA 90 bp GGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACCGAGCGCAGCCACTGTGTaGTGTGTCCTCTGCCATAGG +
Preference number: 5 (lower is better)
Translates to: GTSPNVPRLQDSSIHFAPSAATV*CVLCHR
Trigger: CCTATGGCAGAGGACACACAACACAGTGGCTGCGCT...CGGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp CGTCCATTGGAGAATCTCAGCCCAGCAACGCGAGCTGCCGTCTGTCTTCTAAGGGTCATACAGCAGGGTTaGTGGGCGAAGCACCAGCAG +
Preference number: 5 (lower is better)
Translates to: RPLENLSPATRAAVCLLRVIQQG*WAKHQQ
Trigger: CTGCTGGTGCTTCGCCCACAAACCCTGCTGTATGAC...CCTTAGAAGACAGACGGCAGCTCGCGTTGCTGGGCTGAGATTCTCCAATGGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp CACTCTGTGAAGCTGTCTGACAGAAGGGGACACGCCTTTGCTGCCCAGGATGGAGTCATACAGCAGGGTTaGTGGGCGAAGCACCAGCAG +
Preference number: 5 (lower is better)
Translates to: HSVKLSDRRGHAFAAQDGVIQQG*WAKHQQ
Trigger: CTGCTGGTGCTTCGCCCACAAACCCTGCTGTATGAC...TCCATCCTGGGCAGCAAAGGCGTGTCCCCTTCTGTCAGACAGCTTCACAGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp GGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGCACCGACAGCAGCATTCACTTaGCACCGTGCTGAGCAGAGC +
Preference number: 5 (lower is better)
Translates to: GTSPNVPRLQDSSIHFAPTAAFT*HRAEQS
Trigger: GCTCTGCTCAGCACGGTGCAAAGTGAATGCTGCTGT...CGGTGCAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000575679.1
CDS-3UTR CAA 90 bp GACACCATCCAAGAATTCCTCCTGGGAGACCTCCTGAGGAGACGCGAAGACCATCCTGTCCAGAAGAGATaGGTGTGGGTTGACCTGGCC +
Preference number: 5 (lower is better)
Translates to: DTIQEFLLGDLLRRREDHPVQKR*VWVDLA
Trigger: GGCCAGGTCAACCCACACCAATCTCTTCTGGACAGG...ATGGTCTTCGCGTCTCCTCAGGAGGTCTCCCAGGAGGAATTCTTGGATGGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CAA 90 bp CGACATGAGGACACCATCCAAGAATTCCTCCTGGGAGACCTCCTGAGGAGACGCTGTGGGCGTACACATTaGGACCACACAGTGGGAGTC +
Preference number: 5 (lower is better)
Translates to: RHEDTIQEFLLGDLLRRRCGRTH*DHTVGV
Trigger: GACTCCCACTGTGTGGTCCAAATGTGTACGCCCACA...GCGTCTCCTCAGGAGGTCTCCCAGGAGGAATTCTTGGATGGTGTCCTCATGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp CAGGTGGAAAGCCCTAGGAAGGCTGCGTGCTCTGCAAACCCAGGGGTGCTGTGGCTAAATTCACGTCCATaGGAGAATCTCAGCCCAGCA +
Preference number: 5 (lower is better)
Translates to: QVESPRKAACSANPGVLWLNSRP*ENLSPA
Trigger: TGCTGGGCTGAGATTCTCCAATGGACGTGAATTTAG...CCACAGCACCCCTGGGTTTGCAGAGCACGCAGCCTTCCTAGGGCTTTCCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS TCA 90 bp GCCGACATGAGGACACCATCCAAGAATTCCTCCTGGGAGACCTCCTaGGGAGACGCGAAGACCATCGATGCATCCAGTCTGACGTCTTTG +
Preference number: 5 (lower is better)
Translates to: ADMRTPSKNSSWETS*GDAKTIDASSLTSL
Trigger: CAAAGACGTCAGACTGGATGCATCGATGGTCTTCGCGTCTCCTCAGGAGGTCTCCCAGGAGGAATTCTTGGATGGTGTCCTCATGTCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575679.1
CDS-3UTR CAA 90 bp AATTCACGTCCATTGGAGAATCTCAGCCCAGCAACGCGAGCTGCCGTCTGTCTTGCTGCGGACAGGTCCTaGTTAGTAAGGAGGAGGCTC +
Preference number: 5 (lower is better)
Translates to: NSRPLENLSPATRAAVCLAADRS*LVRRRL
Trigger: GAGCCTCCTCCTTACTAACAAGGACCTGTCCGCAGC...AAGACAGACGGCAGCTCGCGTTGCTGGGCTGAGATTCTCCAATGGACGTGAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp AAGCAGGAACTTCCCCAAACGTGCCCAGGCTCCAAGACAGCAGCATTCACTTTGGCTGCGGACAGGTCCTaGTTAGTAAGGAGGAGGCTC +
Preference number: 5 (lower is better)
Translates to: KQELPQTCPGSKTAAFTLAADRS*LVRRRL
Trigger: GAGCCTCCTCCTTACTAACAAGGACCTGTCCGCAGC...CAAAGTGAATGCTGCTGTCTTGGAGCCTGGGCACGTTTGGGGAAGTTCCTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS TCA 90 bp CTGGGCTGGTTTCACCACGACCTCTTTAGCCCAAGCCAAAGCCTCTaGACGATCTTGCCAGCTTTGGCAAGCAGCCACTCCAATTCTCCA +
Preference number: 5 (lower is better)
Translates to: LGWFHHDLFSPSQSL*TILPALASSHSNSP
Trigger: TGGAGAATTGGAGTGGCTGCTTGCCAAAGCTGGCAAGATCGTTCAGAGGCTTTGGCTTGGGCTAAAGAGGTCGTGGTGAAACCAGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570425.5
CDS-3UTR CAA 90 bp CCAAGGCAACAGCATCATCTAAATTCACGTCCATTGGAGAATCTCAGCCCAGCAGAAGGGGACACGCCTTaGCTGCCCAGGATGGACCTG +
Preference number: 5 (lower is better)
Translates to: PRQQHHLNSRPLENLSPAEGDTP*LPRMDL
Trigger: CAGGTCCATCCTGGGCAGCAAAGGCGTGTCCCCTTC...TGCTGGGCTGAGATTCTCCAATGGACGTGAATTTAGATGATGCTGTTGCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp ATGTGGTGCAAATGTCATACAGCAGGGTTTGTGGGCGAAGCACCAGCAGAGGCATGTGGGCGTACACATTaGGACCACACAGTGGGAGTC +
Preference number: 5 (lower is better)
Translates to: MWCKCHTAGFVGEAPAEACGRTH*DHTVGV
Trigger: GACTCCCACTGTGTGGTCCAAATGTGTACGCCCACA...TGCCTCTGCTGGTGCTTCGCCCACAAACCCTGCTGTATGACATTTGCACCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp AGGGCCGAGAACAGTGCCCAAAGCGCAGCCACTGTGTTGTGTGTCCTCTGCCATCTAAATTCACGTCCATaGGAGAATCTCAGCCCAGCA +
Preference number: 5 (lower is better)
Translates to: RAENSAQSAATVLCVLCHLNSRP*ENLSPA
Trigger: TGCTGGGCTGAGATTCTCCAATGGACGTGAATTTAG...ATGGCAGAGGACACACAACACAGTGGCTGCGCTTTGGGCACTGTTCTCGGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp CTGGTATGCAGGCATCCCCATCACACACTAGGCTTGGTGACTGCACTTGAGGGACATCACACACTAGGCTaGGTGACTGCACTTGAGGGA +
Preference number: 5 (lower is better)
Translates to: LVCRHPHHTLGLVTALEGHHTLG*VTALEG
Trigger: TCCCTCAAGTGCAGTCACCAAGCCTAGTGTGTGATG...TCCCTCAAGTGCAGTCACCAAGCCTAGTGTGTGATGGGGATGCCTGCATACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571983.5
CDS GCA 90 bp TTCACCACGACCTCTTTAGCCCAAGCCAAAGCCTCTGAACGATCTTaGCAGCTTTGGCAAGCAGCCACTCCAATTCTCCACATAGGGTGC +
Preference number: 5 (lower is better)
Translates to: FTTTSLAQAKASERS*QLWQAATPILHIGC
Trigger: GCACCCTATGTGGAGAATTGGAGTGGCTGCTTGCCAAAGCTGGCAAGATCGTTCAGAGGCTTTGGCTTGGGCTAAAGAGGTCGTGGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570425.5
CDS-3UTR CAA 90 bp GATTTATTGGGGGAACCGTACAAGCAGAGGAGAAGCAGGGGTGCCCAGGCTGTCGAAGCACAGCTGAACTaGAATCTTTTCTGGGTCCTC +
Preference number: 5 (lower is better)
Translates to: DLLGEPYKQRRSRGAQAVEAQLN*NLFWVL
Trigger: GAGGACCCAGAAAAGATTCAAGTTCAGCTGTGCTTC...GACAGCCTGGGCACCCCTGCTTCTCCTCTGCTTGTACGGTTCCCCCAATAAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
CDS-3UTR CAA 90 bp CCAGTCCCGGTCAATGACGCAAATATCCAAAAGGGAAGAGAAGCCGATATTCTTGCCCAGGGGTGCCACTaGCCCAGGCTTATGCAGATG +
Preference number: 5 (lower is better)
Translates to: PVPVNDANIQKGREADILAQGCH*PRLMQM
Trigger: CATCTGCATAAGCCTGGGCAAGTGGCACCCCTGGGC...AAGAATATCGGCTTCTCTTCCCTTTTGGATATTTGCGTCATTGACCGGGACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp CTGGTATGCAGGCATCCCCATCACACACTAGGCTTGGTGACTGCACTTGAGGGAGAAGCACAGCTGAACTaGAATCTTTTCTGGGTCCTC +
Preference number: 5 (lower is better)
Translates to: LVCRHPHHTLGLVTALEGEAQLN*NLFWVL
Trigger: GAGGACCCAGAAAAGATTCAAGTTCAGCTGTGCTTC...TCCCTCAAGTGCAGTCACCAAGCCTAGTGTGTGATGGGGATGCCTGCATACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571983.5
CDS-3UTR CAA 90 bp CAACAGCATCATCTAAATTCACGTCCATTGGAGAATCTCAGCCCAGCAACGCGACACGGCGGCCAACTGTaGCTGCAAGAGGGATGTGAA +
Preference number: 5 (lower is better)
Translates to: QQHHLNSRPLENLSPATRHGGQL*LQEGCE
Trigger: TTCACATCCCTCTTGCAGCAACAGTTGGCCGCCGTG...TCGCGTTGCTGGGCTGAGATTCTCCAATGGACGTGAATTTAGATGATGCTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp GCGTCCGTGTCCAGGCAGCTTTGTCATGTCTTCCAAAGGTCAGGAAGGCGCCACTTTCATGAGATGTTGTaGGCACTGTCATGTCAAAGG +
Preference number: 5 (lower is better)
Translates to: ASVSRQLCHVFQRSGRRHFHEML*ALSCQR
Trigger: CCTTTGACATGACAGTGCCAACAACATCTCATGAAA...GTGGCGCCTTCCTGACCTTTGGAAGACATGACAAAGCTGCCTGGACACGGACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS-3UTR CAA 90 bp GTTTTAAGCCCACTACGTTTTGTTGTAATTGGTCATGCACCATTAGATAACAAACCCCGCTGCGCCGTGTaGGGGCGTTTCTCCCGCTGC +
Preference number: 5 (lower is better)
Translates to: VLSPLRFVVIGHAPLDNKPRCAV*GRFSRC
Trigger: GCAGCGGGAGAAACGCCCCAACACGGCGCAGCGGGG...TTTGTTATCTAATGGTGCATGACCAATTACAACAAAACGTAGTGGGCTTAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000573564.5
CDS-3UTR CAA 90 bp GTACAGCAGGGGCGTCCGTGTCCAGGCAGCTTTGTCATGTCTTCCAAAGGTCAGTTTCATGAGATGTTGTaGGCACTGTCATGTCAAAGG +
Preference number: 5 (lower is better)
Translates to: VQQGRPCPGSFVMSSKGQFHEML*ALSCQR
Trigger: CCTTTGACATGACAGTGCCAACAACATCTCATGAAA...CTGACCTTTGGAAGACATGACAAAGCTGCCTGGACACGGACGCCCCTGCTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253928.14
ENST00000416288.6
CDS TCA 90 bp GCTGGGATTTACCATAAATCTGCTGGCTTTCAGGAGAACACGTCTTaGAGCACAGCTGAACTTGAATCTTTTCTGGGTCCTCCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: AGIYHKSAGFQENTS*STAELESFLGPPAG
Trigger: CCCAGCAGGAGGACCCAGAAAAGATTCAAGTTCAGCTGTGCTTCAAGACGTGTTCTCCTGAAAGCCAGCAGATTTATGGTAAATCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571983.5
CDS-3UTR CAA 90 bp CATCACACACTAGGCTTGGTGACTGCACTTGAGGGACTCACAGGACTTAGCCTAGTGATCACACGGTTTTaGTCCTTTTCTCTACTGATC +
Preference number: 5 (lower is better)
Translates to: HHTLGLVTALEGLTGLSLVITRF*SFSLLI
Trigger: GATCAGTAGAGAAAAGGACAAAAACCGTGTGATCAC...TAGGCTAAGTCCTGTGAGTCCCTCAAGTGCAGTCACCAAGCCTAGTGTGTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571983.5
CDS TCA 90 bp AATACAATTACCCATAAATCTGCTGGCTTTCAGGAGAACACGTCTTaGAGCACAGCTGAACTTGAATCTTTTCTGGGTCCTCCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: NTITHKSAGFQENTS*STAELESFLGPPAG
Trigger: CCCAGCAGGAGGACCCAGAAAAGATTCAAGTTCAGCTGTGCTTCAAGACGTGTTCTCCTGAAAGCCAGCAGATTTATGGGTAATTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573564.5
CDS-3UTR CAA 90 bp TTTGTTGTTTTAAGCCCACTACGTTTTGTTGTAATTGGTCATGCACCATTAGATGAAGCACAGCTGAACTaGAATCTTTTCTGGGTCCTC +
Preference number: 5 (lower is better)
Translates to: FVVLSPLRFVVIGHAPLDEAQLN*NLFWVL
Trigger: GAGGACCCAGAAAAGATTCAAGTTCAGCTGTGCTTC...ATCTAATGGTGCATGACCAATTACAACAAAACGTAGTGGGCTTAAAACAACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000573564.5
CDS TCA 72 bp AGCGGCAGGGACGTTCAAGGGCAGGCTCTGCACCTGTaGCACCACGGAGGCCAGGCTGCCCCTCCGGCGGAG +
Preference number: 6 (lower is better)
Translates to: SGRDVQGQALHL*HHGGQAAPPAE
Trigger: CTCCGCCGGAGGGGCAGCCTGGCCTCCGTGGTGTCACAGGTGCAGAGCCTGCCCTTGAACGTCCCTGCCGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570752.5
CDS CCA 72 bp CACCCGCCCAGGCTTGCATGCAGGGTGCGCCGTGCCTaGTTGGTCAGAGGAATGACCCGGGGCCCTCTGGGG +
Preference number: 6 (lower is better)
Translates to: HPPRLACRVRRA*LVRGMTRGPLG
Trigger: CCCCAGAGGGCCCCGGGTCATTCCTCTGACCAACCAGGCACGGCGCACCCTGCATGCAAGCCTGGGCGGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000570752.5
ENST00000571580.1
ENST00000574985.1
CDS GCA 72 bp CCAGCACCCGCCCAGGCTTGCATGCAGGGTGCGCCGTaGCTGGTTGGTCAGAGGAATGACCCGGGGCCCTCT +
Preference number: 6 (lower is better)
Translates to: PAPAQACMQGAP*LVGQRNDPGPS
Trigger: AGAGGGCCCCGGGTCATTCCTCTGACCAACCAGGCACGGCGCACCCTGCATGCAAGCCTGGGCGGGTGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000570752.5
ENST00000571580.1
ENST00000574985.1
CDS GCA 72 bp GGGGCCTCCTTGCCATGCCTTCAGGGAGGCAGTGTCTaGTGCGTCACTCGTCCGTCCCCAGCACCCGCCCAG +
Preference number: 6 (lower is better)
Translates to: GASLPCLQGGSV*CVTRPSPAPAQ
Trigger: CTGGGCGGGTGCTGGGGACGGACGAGTGACGCAGCAGACACTGCCTCCCTGAAGGCATGGCAAGGAGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570752.5
ENST00000571580.1
CDS CAA 72 bp CCGCCCAGGCTTGCATGCAGGGTGCGCCGTGCCTGGTaGGTCAGAGGAATGACCCGGGGCCCTCTGGGGACA +
Preference number: 6 (lower is better)
Translates to: PPRLACRVRRAW*VRGMTRGPLGT
Trigger: TGTCCCCAGAGGGCCCCGGGTCATTCCTCTGACCAACCAGGCACGGCGCACCCTGCATGCAAGCCTGGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000570752.5
ENST00000571580.1
ENST00000574985.1
CDS GCA 72 bp CCCACCTTGCCATGCCTTCAGGGAGGCAGTGTCTGCTaGGTCACTCGTCCGTCCCCAGCACCCGCCCAGGCT +
Preference number: 6 (lower is better)
Translates to: PTLPCLQGGSVC*VTRPSPAPAQA
Trigger: AGCCTGGGCGGGTGCTGGGGACGGACGAGTGACGCAGCAGACACTGCCTCCCTGAAGGCATGGCAAGGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574985.1
CDS GCA 72 bp CGTCCCACCTTGCCATGCCTTCAGGGAGGCAGTGTCTaGTGCGTCACTCGTCCGTCCCCAGCACCCGCCCAG +
Preference number: 6 (lower is better)
Translates to: RPTLPCLQGGSV*CVTRPSPAPAQ
Trigger: CTGGGCGGGTGCTGGGGACGGACGAGTGACGCAGCAGACACTGCCTCCCTGAAGGCATGGCAAGGTGGGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574985.1
CDS GCA 72 bp GCCTCCTTGCCATGCCTTCAGGGAGGCAGTGTCTGCTaGGTCACTCGTCCGTCCCCAGCACCCGCCCAGGCT +
Preference number: 6 (lower is better)
Translates to: ASLPCLQGGSVC*VTRPSPAPAQA
Trigger: AGCCTGGGCGGGTGCTGGGGACGGACGAGTGACGCAGCAGACACTGCCTCCCTGAAGGCATGGCAAGGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570752.5
ENST00000571580.1
CDS CAA 72 bp GTGAGGCCCCTGCAGGTGGCGGCCAAGCGTCCCACCTaGCCATGCCTTCAGGGAGGCAGTGTCTGCTGCGTC +
Preference number: 6 (lower is better)
Translates to: VRPLQVAAKRPT*PCLQGGSVCCV
Trigger: GACGCAGCAGACACTGCCTCCCTGAAGGCATGGCAAGGTGGGACGCTTGGCCGCCACCTGCAGGGGCCTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574985.1
CDS GCA 72 bp GTGAAGCCACCTTGGGTGGGCGGCTCGGAGCTCCTCTaGCCACATCGCCTCACTGGGACTCGCCATCCAGTC +
Preference number: 6 (lower is better)
Translates to: VKPPWVGGSELL*PHRLTGTRHPV
Trigger: GACTGGATGGCGAGTCCCAGTGAGGCGATGTGGGCAGAGGAGCTCCGAGCCGCCCACCCAAGGTGGCTTCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253928.14
ENST00000344592.9
ENST00000416288.6
ENST00000570752.5
ENST00000574985.1
CDS GCA 72 bp TCACTCGTCCGTCCCCAGCACCCGCCCAGGCTTGCATaGAGGGTGCGCCGTGCCTGGTTGGTCAGAGGAATG +
Preference number: 6 (lower is better)
Translates to: SLVRPQHPPRLA*RVRRAWLVRGM
Trigger: CATTCCTCTGACCAACCAGGCACGGCGCACCCTGCATGCAAGCCTGGGCGGGTGCTGGGGACGGACGAGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000570752.5
ENST00000571580.1
ENST00000574985.1
CDS GCA 72 bp CCCCTGCAGGTGGCGGCCAAGCGTCCCACCTTGCCATaGCTTCAGGGAGGCAGTGTCTGCTGCGTCACTCGT +
Preference number: 6 (lower is better)
Translates to: PLQVAAKRPTLP*LQGGSVCCVTR
Trigger: ACGAGTGACGCAGCAGACACTGCCTCCCTGAAGGCATGGCAAGGTGGGACGCTTGGCCGCCACCTGCAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574985.1
CDS TCA 72 bp CATGCAGGGTGCGCCGTGCCTGGTTGGTCAGAGGAATaGCCCGGGGCCCTCTGGGGACAAAGCTGCTCAGGA +
Preference number: 6 (lower is better)
Translates to: HAGCAVPGWSEE*PGALWGQSCSG
Trigger: TCCTGAGCAGCTTTGTCCCCAGAGGGCCCCGGGTCATTCCTCTGACCAACCAGGCACGGCGCACCCTGCATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000570752.5
ENST00000571580.1
ENST00000574985.1
CDS TCA 72 bp CCCTCCGGCGGAGGGAAGCGACAGACATTTCAGACATaGAAGGCCTCAACGTGCTACCTCCCGGGACCGGCC +
Preference number: 6 (lower is better)
Translates to: PSGGGKRQTFQT*KASTCYLPGPA
Trigger: GGCCGGTCCCGGGAGGTAGCACGTTGAGGCCTTTCATGTCTGAAATGTCTGTCGCTTCCCTCCGCCGGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570752.5
CDS CCA 72 bp CAGGCTGCACTGGGAGGTTCCAGCAACCTGCGGTTGTaGATGATCGGATCCAGGTGGGGTCGACCTGGACAC +
Preference number: 6 (lower is better)
Translates to: QAALGGSSNLRL*MIGSRWGRPGH
Trigger: GTGTCCAGGTCGACCCCACCTGGATCCGATCATCCACAACCGCAGGTTGCTGGAACCTCCCAGTGCAGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570752.5
CDS TCA 72 bp CCCCCAGTCAGCCGCGAGCAGGTTTCTAGGCTAAAGTaGAACCAAACGTGGCCGGGTATGGTGGCTCACGCC +
Preference number: 6 (lower is better)
Translates to: PPVSREQVSRLK*NQTWPGMVAHA
Trigger: GGCGTGAGCCACCATACCCGGCCACGTTTGGTTTCACTTTAGCCTAGAAACCTGCTCGCGGCTGACTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570752.5
CDS TCA 72 bp CTGCACTGGGAGGTTCCAGCAACCTGCGGTTGTGGATaGTCGGATCCAGGTGGGGTCGACCTGGACACACAA +
Preference number: 6 (lower is better)
Translates to: LHWEVPATCGCG*SDPGGVDLDTQ
Trigger: TTGTGTGTCCAGGTCGACCCCACCTGGATCCGATCATCCACAACCGCAGGTTGCTGGAACCTCCCAGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570752.5
CDS CAA 90 bp GGCAGGAGGATGAGGAGGGAGTGTTTCATGGGCACAGAGCAGCCGTaGGGGAAGATGAAAAGGTTCTGGAGATGGACGGTGGTGACGGAT +
Preference number: 6 (lower is better)
Translates to: GRRMRRECFMGTEQP*GKMKRFWRWTVVTD
Trigger: ATCCGTCACCACCGTCCATCTCCAGAACCTTTTCATCTTCCCCAACGGCTGCTCTGTGCCCATGAAACACTCCCTCCTCATCCTCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570759.1
CDS CCA 72 bp GCGGTTGTGGATGATCGGATCCAGGTGGGGTCGACCTaGACACACAAAAGCAGGCAAACAAACGCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: AVVDDRIQVGST*THKSRQTNAAA
Trigger: AGCTGCTGCGTTTGTTTGCCTGCTTTTGTGTGTCCAGGTCGACCCCACCTGGATCCGATCATCCACAACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570752.5
CDS TCA 72 bp AGGACACCATCCAAGAATTCCTCCTGGGAGACCTCCTaGGGAGACGCGAAGACCATCGATGCATCCAGTCTG +
Preference number: 6 (lower is better)
Translates to: RTPSKNSSWETS*GDAKTIDASSL
Trigger: CAGACTGGATGCATCGATGGTCTTCGCGTCTCCTCAGGAGGTCTCCCAGGAGGAATTCTTGGATGGTGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575679.1
CDS CCA 72 bp TCCAGCAACCTGCGGTTGTGGATGATCGGATCCAGGTaGGGTCGACCTGGACACACAAAAGCAGGCAAACAA +
Preference number: 6 (lower is better)
Translates to: SSNLRLWMIGSR*GRPGHTKAGKQ
Trigger: TTGTTTGCCTGCTTTTGTGTGTCCAGGTCGACCCCACCTGGATCCGATCATCCACAACCGCAGGTTGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570752.5
CDS TCA 72 bp TTTCACCACGACCTCTTTAGCCCAAGCCAAAGCCTCTaGACGATCTTGCCAGCTTTGGCAAGCAGCCACTCC +
Preference number: 6 (lower is better)
Translates to: FHHDLFSPSQSL*TILPALASSHS
Trigger: GGAGTGGCTGCTTGCCAAAGCTGGCAAGATCGTTCAGAGGCTTTGGCTTGGGCTAAAGAGGTCGTGGTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570425.5