RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FLT3 (Homo sapiens)

Ensembl gene IDs: ENSG00000122025

Ensembl transcript IDs: ENST00000241453.12, ENST00000380987.2, ENST00000469894.1

Found 256 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGACCTGAGCCTGCGGAGAGAGTAGCCCCAAATCCATCTCTCTGCTaGAAGGTCGCCTGTTTTGGTAGGTGTGAGGACATTCCGAAACAC +
Preference number: 1 (lower is better)
Translates to: RPEPAERVAPNPSLC*KVACFGRCEDIPKH
Trigger: GTGTTTCGGAATGTCCTCACACCTACCAAAACAGGCGACCTTTCAGCAGAGAGATGGATTTGGGGCTACTCTCTCCGCAGGCTCAGGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380987.2
3UTR GCA 90 bp ACAATTCACTCAAGCCAGCCTGAGAAGGCCTTGGATGCAGATCAATaGTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGACAGG +
Preference number: 1 (lower is better)
Translates to: TIHSSQPEKALDADQ*SNKVHYQLLLPCDR
Trigger: CCTGTCACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCAAGGCCTTCTCAGGCTGGCTTGAGTGAATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
3UTR TCA 90 bp GATGAAGTCCTTAAAACTAAATTGTTCCTCTACGAATCTTCGACCTaGGCCTGCGGAGAGAGTAGCCCCAAATCCATCTCTCTGCTGAAA +
Preference number: 1 (lower is better)
Translates to: DEVLKTKLFLYESST*ACGESSPKSISLLK
Trigger: TTTCAGCAGAGAGATGGATTTGGGGCTACTCTCTCCGCAGGCTCAGGTCGAAGATTCGTAGAGGAACAATTTAGTTTTAAGGACTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380987.2
3UTR CCA 90 bp TGTACTTCAGGTACACAATTCACTCAAGCCAGCCTGAGAAGGCCTTaGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCC +
Preference number: 1 (lower is better)
Translates to: CTSGTQFTQASLRRP*MQINAPIKFIISSS
Trigger: GGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCAAGGCCTTCTCAGGCTGGCTTGAGTGAATTGTGTACCTGAAGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
3UTR TCA 90 bp GACAAGAGTAACTTTATTGAAAATACTAATCCTCCATGTTACTTCTaGCTGGCCCTGAGTCTGGGAAGGCCGCCAAAGTGTCTAGGTGAT +
Preference number: 1 (lower is better)
Translates to: DKSNFIENTNPPCYF*LALSLGRPPKCLGD
Trigger: ATCACCTAGACACTTTGGCGGCCTTCCCAGACTCAGGGCCAGTCAGAAGTAACATGGAGGATTAGTATTTTCAATAAAGTTACTCTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241453.12
3UTR-3UTR TCA 90 bp GTGGCTATGGGTGCACAATTTCAGGGGGTTCGTGAACTCCAGTTAAGACTTGCCTCACTCAAGCCAGCCTaGGAAGGCCTTGGATGCAGA +
Preference number: 2 (lower is better)
Translates to: VAMGAQFQGVRELQLRLASLKPA*EGLGCR
Trigger: TCTGCATCCAAGGCCTTCTCAGGCTGGCTTGAGTGA...GGCAAGTCTTAACTGGAGTTCACGAACCCCCTGAAATTGTGCACCCATAGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000241453.12
3UTR-3UTR TCA 90 bp AATCAGTTTGTAGAAGTTAGCATCAACCGGAATGCCAGGGTAAGGATTCACACCCCACTTTCCCGTGGGTaGCAAGCACGTTCCTGGCGG +
Preference number: 2 (lower is better)
Translates to: NQFVEVSINRNARVRIHTPLSRG*QARSWR
Trigger: CCGCCAGGAACGTGCTTGTCACCCACGGGAAAGTGG...GGTGTGAATCCTTACCCTGGCATTCCGGTTGATGCTAACTTCTACAAACTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380987.2
3UTR-3UTR TCA 90 bp TTTGGTAGGTGTGAGGACATTCCGAAACACGGCCATCCACATTCTGATACATCGGAGTCCGGGTGTATCTaGACTTCTCTTGAACCAGGC +
Preference number: 2 (lower is better)
Translates to: FGRCEDIPKHGHPHSDTSESGCI*TSLEPG
Trigger: GCCTGGTTCAAGAGAAGTTCAGATACACCCGGACTC...CGATGTATCAGAATGTGGATGGCCGTGTTTCGGAATGTCCTCACACCTACCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380987.2
3UTR-3UTR CCA 90 bp GCCCTGAGATTTGATCCGAGTCCGGGTGTATCTGAACTTCTCTTGAACCAGGCACCTGTTAGGGATAGGTaGAGGGATGAAGTCCTTAAA +
Preference number: 2 (lower is better)
Translates to: ALRFDPSPGVSELLLNQAPVRDR*RDEVLK
Trigger: TTTAAGGACTTCATCCCTCCACCTATCCCTAACAGG...TGCCTGGTTCAAGAGAAGTTCAGATACACCCGGACTCGGATCAAATCTCAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380987.2
3UTR-3UTR TCA 90 bp AGCCAGCCTGAGAAGGCCTTGGATGCAGATCAATGCTCCAATAAAGTTCATTATGACGGGCATTGCCCCTaGCAACATAGTTGGAATCAC +
Preference number: 2 (lower is better)
Translates to: SQPEKALDADQCSNKVHYDGHCP*QHSWNH
Trigger: GTGATTCCAACTATGTTGTCAGGGGCAATGCCCGTC...ATAATGAACTTTATTGGAGCATTGATCTGCATCCAAGGCCTTCTCAGGCTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380987.2
3UTR-3UTR TCA 90 bp GGGATGAAGTCCTTAAAACTAAATTGTTCCTCTACGAATCTTCGACCTGAGCCTGGATGGCCGTTTCCTTaGGTCAAAAGCCCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: GMKSLKLNCSSTNLRPEPGWPFP*VKSPAG
Trigger: TCCTGCTGGGCTTTTGACTCAAGGAAACGGCCATCC...AGGCTCAGGTCGAAGATTCGTAGAGGAACAATTTAGTTTTAAGGACTTCATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380987.2
3UTR-3UTR CCA 90 bp AGCCAGCCTGAGAAGGCCTTGGATGCAGATCAATGCTCCAATAAAGTTCATTATTTCACCACTTTCCCGTaGGTGACAAGCACGTTCCTG +
Preference number: 2 (lower is better)
Translates to: SQPEKALDADQCSNKVHYFTTFP*VTSTFL
Trigger: CAGGAACGTGCTTGTCACCCACGGGAAAGTGGTGAA...ATAATGAACTTTATTGGAGCATTGATCTGCATCCAAGGCCTTCTCAGGCTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380987.2
3UTR-3UTR TCA 90 bp ATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGACAATTCCCATGAAGCCCTaGGATTTGATCCGAGTCCGG +
Preference number: 2 (lower is better)
Translates to: MQINAPIKFIISSSCLVTIPMKP*DLIRVR
Trigger: CCGGACTCGGATCAAATCTCAGGGCTTCATGGGAAT...TGTCACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380987.2
3UTR-3UTR GCA 90 bp GGTAGAACACCTATTCATTATAAACTTCCCCCAATACAACCCCTGTTGTTGCAGGTAGGTGGCTATGGGTaGACAATTTCAGGGGGTTCG +
Preference number: 2 (lower is better)
Translates to: GRTPIHYKLPPIQPLLLQVGGYG*TISGGS
Trigger: CGAACCCCCTGAAATTGTGCACCCATAGCCACCTAC...CTGCAACAACAGGGGTTGTATTGGGGGAAGTTTATAATGAATAGGTGTTCTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000241453.12
3UTR-3UTR CCA 90 bp AATCAGTTTGTAGAAGTTAGCATCAACCGGAATGCCAGGGTAAGGATTCACACCAGCCTGAGAAGGCCTTaGATGCAGATCAATGCTCCA +
Preference number: 2 (lower is better)
Translates to: NQFVEVSINRNARVRIHTSLRRP*MQINAP
Trigger: TGGAGCATTGATCTGCATCCAAGGCCTTCTCAGGCT...GGTGTGAATCCTTACCCTGGCATTCCGGTTGATGCTAACTTCTACAAACTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380987.2
3UTR CAA 90 bp CTGTACTTCAGGTACACAATTCACTCAAGCCAGCCTGAGAAGGCCTaGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTC +
Preference number: 2 (lower is better)
Translates to: LYFRYTIHSSQPEKA*DADQCSNKVHYQLL
Trigger: GAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCAAGGCCTTCTCAGGCTGGCTTGAGTGAATTGTGTACCTGAAGTACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
3UTR-3UTR CCA 90 bp CAATTTCAGGGGGTTCGTGAACTCCAGTTAAGACTTGCCCTAATTATACCATGTAGCCTGAGAAGGCCTTaGATGCAGATCAATGCTCCA +
Preference number: 2 (lower is better)
Translates to: QFQGVRELQLRLALIIPCSLRRP*MQINAP
Trigger: TGGAGCATTGATCTGCATCCAAGGCCTTCTCAGGCT...ACATGGTATAATTAGGGCAAGTCTTAACTGGAGTTCACGAACCCCCTGAAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000241453.12
3UTR-3UTR TCA 90 bp AGCCAGCCTGAGAAGGCCTTGGATGCAGATCAATGCTCCAATAAAGTTCATTATGCTCCTCCTGCCTTGTaGCAGGATGATTTGATTTTA +
Preference number: 2 (lower is better)
Translates to: SQPEKALDADQCSNKVHYAPPAL*QDDLIL
Trigger: TAAAATCAAATCATCCTGTCACAAGGCAGGAGGAGC...ATAATGAACTTTATTGGAGCATTGATCTGCATCCAAGGCCTTCTCAGGCTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
3UTR-3UTR CCA 90 bp AATATACTGTACTTCAGGTACACAATTCACTCAAGCCAGCCTGAGAAGGCCTTGCCTGTTAGGGATAGGTaGAGGGATGAAGTCCTTAAA +
Preference number: 2 (lower is better)
Translates to: NILYFRYTIHSSQPEKALPVRDR*RDEVLK
Trigger: TTTAAGGACTTCATCCCTCCACCTATCCCTAACAGG...CAAGGCCTTCTCAGGCTGGCTTGAGTGAATTGTGTACCTGAAGTACAGTATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
3UTR-3UTR TCA 90 bp CAATTTCAGGGGGTTCGTGAACTCCAGTTAAGACTTGCCCTAATTATACCATGTGCTCCTCCTGCCTTGTaGCAGGATGATTTGATTTTA +
Preference number: 2 (lower is better)
Translates to: QFQGVRELQLRLALIIPCAPPAL*QDDLIL
Trigger: TAAAATCAAATCATCCTGTCACAAGGCAGGAGGAGC...ACATGGTATAATTAGGGCAAGTCTTAACTGGAGTTCACGAACCCCCTGAAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241453.12
3UTR-3UTR TCA 90 bp AGGTGGAGGGATGAAGTCCTTAAAACTAAATTGTTCCTCTACGAATCTTCGACCTCATTCTTTGGTTTCTaGACTCAGCCCACTTTCCCT +
Preference number: 2 (lower is better)
Translates to: RWRDEVLKTKLFLYESSTSFFGF*TQPTFP
Trigger: AGGGAAAGTGGGCTGAGTTCAGAAACCAAAGAATGA...GGTCGAAGATTCGTAGAGGAACAATTTAGTTTTAAGGACTTCATCCCTCCACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380987.2
3UTR-3UTR CCA 90 bp GGGATGAAGTCCTTAAAACTAAATTGTTCCTCTACGAATCTTCGACCTGAGCCTATCGATCTCATTCTTTaGTTTCTGAACTCAGCCCAC +
Preference number: 2 (lower is better)
Translates to: GMKSLKLNCSSTNLRPEPIDLIL*FLNSAH
Trigger: GTGGGCTGAGTTCAGAAACCAAAGAATGAGATCGAT...AGGCTCAGGTCGAAGATTCGTAGAGGAACAATTTAGTTTTAAGGACTTCATCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380987.2
3UTR-3UTR TCA 90 bp AGCCAGCCTGAGAAGGCCTTGGATGCAGATCAATGCTCCAATAAAGTTCATTATTGCCTTGTGACAGGATaGTTTGATTTTACAAAAGTC +
Preference number: 2 (lower is better)
Translates to: SQPEKALDADQCSNKVHYCLVTG*FDFTKV
Trigger: GACTTTTGTAAAATCAAATCATCCTGTCACAAGGCA...ATAATGAACTTTATTGGAGCATTGATCTGCATCCAAGGCCTTCTCAGGCTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
3UTR-3UTR TCA 90 bp AGGTGGAGGGATGAAGTCCTTAAAACTAAATTGTTCCTCTACGAATCTTCGACCTGCCTTGTGACAGGATaGTTTGATTTTACAAAAGTC +
Preference number: 2 (lower is better)
Translates to: RWRDEVLKTKLFLYESSTCLVTG*FDFTKV
Trigger: GACTTTTGTAAAATCAAATCATCCTGTCACAAGGCA...GGTCGAAGATTCGTAGAGGAACAATTTAGTTTTAAGGACTTCATCCCTCCACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380987.2
3UTR-3UTR TCA 90 bp TTGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTATTCCTTTGGCAACTTaGTATGCAAAGCAAAGAAGA +
Preference number: 2 (lower is better)
Translates to: LDADQCSNKVHYQLLLPCIPLAT*YAKQRR
Trigger: TCTTCTTTGCTTTGCATATCAAGTTGCCAAAGGAAT...ACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380987.2
3UTR CAA 90 bp TATTTCTTCTGTAGCATAAAATGGCTGATCCATTTTAAATCCATTTaGAATCAGTTTGTAGAAGTTAGCATCAACCGGAATGCCAGGGTA +
Preference number: 2 (lower is better)
Translates to: YFFCSIKWLIHFKSI*NQFVEVSINRNARV
Trigger: TACCCTGGCATTCCGGTTGATGCTAACTTCTACAAACTGATTCAAAATGGATTTAAAATGGATCAGCCATTTTATGCTACAGAAGAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380987.2
3UTR CCA 72 bp AGCACACGTGCTCTGGAAGGAATGTGTAGGTGGCTATaGGTGCACAATTTCAGGGGGTTCGTGAACTCCAGT +
Preference number: 3 (lower is better)
Translates to: STRALEGMCRWL*VHNFRGFVNSS
Trigger: ACTGGAGTTCACGAACCCCCTGAAATTGTGCACCCATAGCCACCTACACATTCCTTCCAGAGCACGTGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000241453.12
3UTR CCA 72 bp GGTAAAAGCACACGTGCTCTGGAAGGAATGTGTAGGTaGCTATGGGTGCACAATTTCAGGGGGTTCGTGAAC +
Preference number: 3 (lower is better)
Translates to: GKSTRALEGMCR*LWVHNFRGFVN
Trigger: GTTCACGAACCCCCTGAAATTGTGCACCCATAGCCACCTACACATTCCTTCCAGAGCACGTGTGCTTTTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241453.12
3UTR-3UTR CAA 90 bp GCCCTGAGATTTGATCCGAGTCCGGGTGTATCTGAACTTCTCTTGAACCAGGCAGATCGATCTCATTCTTaGGTTTCTGAACTCAGCCCA +
Preference number: 3 (lower is better)
Translates to: ALRFDPSPGVSELLLNQADRSHS*VSELSP
Trigger: TGGGCTGAGTTCAGAAACCAAAGAATGAGATCGATC...TGCCTGGTTCAAGAGAAGTTCAGATACACCCGGACTCGGATCAAATCTCAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380987.2
3UTR-3UTR CAA 90 bp CAATTTCAGGGGGTTCGTGAACTCCAGTTAAGACTTGCCCTAATTATACCATGTCAGCCTGAGAAGGCCTaGGATGCAGATCAATGCTCC +
Preference number: 3 (lower is better)
Translates to: QFQGVRELQLRLALIIPCQPEKA*DADQCS
Trigger: GGAGCATTGATCTGCATCCAAGGCCTTCTCAGGCTG...ACATGGTATAATTAGGGCAAGTCTTAACTGGAGTTCACGAACCCCCTGAAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000241453.12
3UTR TCA 72 bp GTAGGTGGCTATGGGTGCACAATTTCAGGGGGTTCGTaGACTCCAGTTAAGACTTGCCCTAATTATACCATG +
Preference number: 3 (lower is better)
Translates to: VGGYGCTISGGS*TPVKTCPNYTM
Trigger: CATGGTATAATTAGGGCAAGTCTTAACTGGAGTTCACGAACCCCCTGAAATTGTGCACCCATAGCCACCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000241453.12
3UTR CCA 72 bp CATTCCTTGTATCTTGGGGTAAAAGCACACGTGCTCTaGAAGGAATGTGTAGGTGGCTATGGGTGCACAATT +
Preference number: 3 (lower is better)
Translates to: HSLYLGVKAHVL*KECVGGYGCTI
Trigger: AATTGTGCACCCATAGCCACCTACACATTCCTTCCAGAGCACGTGTGCTTTTACCCCAAGATACAAGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241453.12
3UTR-3UTR CAA 90 bp GCCTGTTTTGGTAGGTGTGAGGACATTCCGAAACACGGCCATCCACATTCTGATCATTCCTTTGGCAACTaGATATGCAAAGCAAAGAAG +
Preference number: 3 (lower is better)
Translates to: ACFGRCEDIPKHGHPHSDHSFGN*ICKAKK
Trigger: CTTCTTTGCTTTGCATATCAAGTTGCCAAAGGAATG...ATCAGAATGTGGATGGCCGTGTTTCGGAATGTCCTCACACCTACCAAAACAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380987.2
3UTR TCA 72 bp GATTTGATCCGAGTCCGGGTGTATCTGAACTTCTCTTaGACCAGGCATGATCGATCTCATTCTTTGGTTTCT +
Preference number: 3 (lower is better)
Translates to: DLIRVRVYLNFS*TRHDRSHSLVS
Trigger: AGAAACCAAAGAATGAGATCGATCATGCCTGGTTCAAGAGAAGTTCAGATACACCCGGACTCGGATCAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380987.2
3UTR CCA 72 bp GGTACACAATTCACTCAAGCCAGCCTGAGAAGGCCTTaGATGCAGATCAATGCTCCAATAAAGTTCATTATC +
Preference number: 3 (lower is better)
Translates to: GTQFTQASLRRP*MQINAPIKFII
Trigger: GATAATGAACTTTATTGGAGCATTGATCTGCATCCAAGGCCTTCTCAGGCTGGCTTGAGTGAATTGTGTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
3UTR TCA 72 bp AAACGAAGTCAAATTAGGGAAGGATGGCCGTTTCCTTaGGTCAAAAGCCCAGCAGGATTGCATTATAATGTA +
Preference number: 3 (lower is better)
Translates to: KRSQIREGWPFP*VKSPAGLHYNV
Trigger: TACATTATAATGCAATCCTGCTGGGCTTTTGACTCAAGGAAACGGCCATCCTTCCCTAATTTGACTTCGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380987.2
3UTR CCA 72 bp TCTTGTTTTGGTAATCTACAGCCTGTTAGGGATAGGTaGAGGGATGAAGTCCTTAAAACTAAATTGTTCCTC +
Preference number: 3 (lower is better)
Translates to: SCFGNLQPVRDR*RDEVLKTKLFL
Trigger: GAGGAACAATTTAGTTTTAAGGACTTCATCCCTCCACCTATCCCTAACAGGCTGTAGATTACCAAAACAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS-3UTR CCA 90 bp CTGGAAGGAATGTGTAGGTGGCTATGGGTGCACAATTTCAGGGGGTTCGTGAACACGAGCAGCGGCAGCTaGCCGCCGTCGCGCGCCAAC +
Preference number: 4 (lower is better)
Translates to: LEGMCRWLWVHNFRGFVNTSSGS*PPSRAN
Trigger: GTTGGCGCGCGACGGCGGCCAGCTGCCGCTGCTCGT...GTTCACGAACCCCCTGAAATTGTGCACCCATAGCCACCTACACATTCCTTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR CCA 90 bp AGGTGTGAGGACATTCCGAAACACGGCCATCCACATTCTGATACATCGCTTCTTACGAGCAGCGGCAGCTaGCCGCCGTCGCGCGCCAAC +
Preference number: 4 (lower is better)
Translates to: RCEDIPKHGHPHSDTSLLTSSGS*PPSRAN
Trigger: GTTGGCGCGCGACGGCGGCCAGCTGCCGCTGCTCGT...AAGAAGCGATGTATCAGAATGTGGATGGCCGTGTTTCGGAATGTCCTCACACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS-3UTR TCA 90 bp GCCTGTTTTGGTAGGTGTGAGGACATTCCGAAACACGGCCATCCACATTCTGATGAGAAACAGGACGCCTaGCTTGCCGATGCTTCTGCG +
Preference number: 4 (lower is better)
Translates to: ACFGRCEDIPKHGHPHSDEKQDA*LADASA
Trigger: CGCAGAAGCATCGGCAAGTCAGGCGTCCTGTTTCTC...ATCAGAATGTGGATGGCCGTGTTTCGGAATGTCCTCACACCTACCAAAACAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS-3UTR TCA 90 bp CTGGAAGGAATGTGTAGGTGGCTATGGGTGCACAATTTCAGGGGGTTCGTGAACTACGAATCTTCGACCTaGGCCTGCGGAGAGAGTAGC +
Preference number: 4 (lower is better)
Translates to: LEGMCRWLWVHNFRGFVNYESST*ACGESS
Trigger: GCTACTCTCTCCGCAGGCTCAGGTCGAAGATTCGTA...GTTCACGAACCCCCTGAAATTGTGCACCCATAGCCACCTACACATTCCTTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR GCA 90 bp CTGGAAGGAATGTGTAGGTGGCTATGGGTGCACAATTTCAGGGGGTTCGTGAACGAACGCTCTCAGATATaGAGACCAGGGCGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: LEGMCRWLWVHNFRGFVNERSQI*RPGRPG
Trigger: ACCAGGACGCCCTGGTCTGCATATCTGAGAGCGTTC...GTTCACGAACCCCCTGAAATTGTGCACCCATAGCCACCTACACATTCCTTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR GCA 90 bp GCCCTGAGATTTGATCCGAGTCCGGGTGTATCTGAACTTCTCTTGAACCAGGCAGCCTGGTGCATTCCCTaGCCAGTTCATTTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: ALRFDPSPGVSELLLNQAAWCIP*PVHFWH
Trigger: GTGCCAGAAATGAACTGGGCAGGGAATGCACCAGGC...TGCCTGGTTCAAGAGAAGTTCAGATACACCCGGACTCGGATCAAATCTCAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380987.2
3UTR CAA 72 bp CCCCAAATCCATCTCTCTGCTGAAAGGTCGCCTGTTTaGGTAGGTGTGAGGACATTCCGAAACACGGCCATC +
Preference number: 4 (lower is better)
Translates to: PQIHLSAERSPV*VGVRTFRNTAI
Trigger: GATGGCCGTGTTTCGGAATGTCCTCACACCTACCAAAACAGGCGACCTTTCAGCAGAGAGATGGATTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS-3UTR TCA 90 bp AGCCAGCCTGAGAAGGCCTTGGATGCAGATCAATGCTCCAATAAAGTTCATTATCCACTTTCCCGTGGGTaGCAAGCACGTTCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: SQPEKALDADQCSNKVHYPLSRG*QARSWR
Trigger: CCGCCAGGAACGTGCTTGTCACCCACGGGAAAGTGG...ATAATGAACTTTATTGGAGCATTGATCTGCATCCAAGGCCTTCTCAGGCTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp TGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGCCACTTTCCCGTGGGTaGCAAGCACGTTCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: WMQINAPIKFIISSSCLVPLSRG*QARSWR
Trigger: CCGCCAGGAACGTGCTTGTCACCCACGGGAAAGTGG...CACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp AAACTAAATTGTTCCTCTACGAATCTTCGACCTGAGCCTGCGGAGAGAGTAGCCGGATGGCCGTTTCCTTaGGTCAAAAGCCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: KLNCSSTNLRPEPAERVAGWPFP*VKSPAG
Trigger: TCCTGCTGGGCTTTTGACTCAAGGAAACGGCCATCC...GGCTACTCTCTCCGCAGGCTCAGGTCGAAGATTCGTAGAGGAACAATTTAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS-3UTR CCA 90 bp GTGGCTATGGGTGCACAATTTCAGGGGGTTCGTGAACTCCAGTTAAGACTTGCCAAAGCACACGTGCTCTaGAAGGAATGTGTAGGTGGC +
Preference number: 4 (lower is better)
Translates to: VAMGAQFQGVRELQLRLAKAHVL*KECVGG
Trigger: GCCACCTACACATTCCTTCCAGAGCACGTGTGCTTT...GGCAAGTCTTAACTGGAGTTCACGAACCCCCTGAAATTGTGCACCCATAGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR TCA 90 bp GATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGACTTCGTACACTGTCCCTaGGCTCTGGGGTCTCAACGC +
Preference number: 4 (lower is better)
Translates to: DADQCSNKVHYQLLLPCDFVHCP*ALGSQR
Trigger: GCGTTGAGACCCCAGAGCTCAGGGACAGTGTACGAA...GTCACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp AATATACTGTACTTCAGGTACACAATTCACTCAAGCCAGCCTGAGAAGGCCTTGTTCGTACACTGTCCCTaGGCTCTGGGGTCTCAACGC +
Preference number: 4 (lower is better)
Translates to: NILYFRYTIHSSQPEKALFVHCP*ALGSQR
Trigger: GCGTTGAGACCCCAGAGCTCAGGGACAGTGTACGAA...CAAGGCCTTCTCAGGCTGGCTTGAGTGAATTGTGTACCTGAAGTACAGTATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp GAGAAGGCCTTGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCGAGAAACAGGACGCCTaGCTTGCCGATGCTTCTGCG +
Preference number: 4 (lower is better)
Translates to: EKALDADQCSNKVHYQLLEKQDA*LADASA
Trigger: CGCAGAAGCATCGGCAAGTCAGGCGTCCTGTTTCTC...GAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCAAGGCCTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp GCCTGTTTTGGTAGGTGTGAGGACATTCCGAAACACGGCCATCCACATTCTGATGAAGTACTCATTATCTaGGGAGCCGGTCACCTGTAC +
Preference number: 4 (lower is better)
Translates to: ACFGRCEDIPKHGHPHSDEVLII*GAGHLY
Trigger: GTACAGGTGACCGGCTCCTCAGATAATGAGTACTTC...ATCAGAATGTGGATGGCCGTGTTTCGGAATGTCCTCACACCTACCAAAACAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS-3UTR TCA 90 bp GTGGCTATGGGTGCACAATTTCAGGGGGTTCGTGAACTCCAGTTAAGACTTGCCATTTCAGGGGGTTCGTaGACTCCAGTTAAGACTTGC +
Preference number: 4 (lower is better)
Translates to: VAMGAQFQGVRELQLRLAISGGS*TPVKTC
Trigger: GCAAGTCTTAACTGGAGTTCACGAACCCCCTGAAAT...GGCAAGTCTTAACTGGAGTTCACGAACCCCCTGAAATTGTGCACCCATAGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR GCA 90 bp AATATACTGTACTTCAGGTACACAATTCACTCAAGCCAGCCTGAGAAGGCCTTGCGCCTGACTTGCCGATaGTTCTGCGAGCACTTGAGG +
Preference number: 4 (lower is better)
Translates to: NILYFRYTIHSSQPEKALRLTCR*FCEHLR
Trigger: CCTCAAGTGCTCGCAGAAGCATCGGCAAGTCAGGCG...CAAGGCCTTCTCAGGCTGGCTTGAGTGAATTGTGTACCTGAAGTACAGTATATT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR GCA 90 bp TGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGCGCCTGACTTGCCGATaGTTCTGCGAGCACTTGAGG +
Preference number: 4 (lower is better)
Translates to: WMQINAPIKFIISSSCLVRLTCR*FCEHLR
Trigger: CCTCAAGTGCTCGCAGAAGCATCGGCAAGTCAGGCG...CACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR GCA 90 bp AATATACTGTACTTCAGGTACACAATTCACTCAAGCCAGCCTGAGAAGGCCTTGACAGGACGCCTGACTTaGCGATGCTTCTGCGAGCAC +
Preference number: 4 (lower is better)
Translates to: NILYFRYTIHSSQPEKALTGRLT*RCFCEH
Trigger: GTGCTCGCAGAAGCATCGGCAAGTCAGGCGTCCTGT...CAAGGCCTTCTCAGGCTGGCTTGAGTGAATTGTGTACCTGAAGTACAGTATATT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR GCA 90 bp GAGAAGGCCTTGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCACAGGACGCCTGACTTaGCGATGCTTCTGCGAGCAC +
Preference number: 4 (lower is better)
Translates to: EKALDADQCSNKVHYQLLTGRLT*RCFCEH
Trigger: GTGCTCGCAGAAGCATCGGCAAGTCAGGCGTCCTGT...GAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCAAGGCCTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR GCA 90 bp TGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGTTGGTCCTGACAGTGTaGACGCCCCCAGCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: WMQINAPIKFIISSSCLVLVLTV*TPPAGS
Trigger: TGAACCTGCTGGGGGCGTGCACACTGTCAGGACCAA...CACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CCA 90 bp GGTAGAACACCTATTCATTATAAACTTCCCCCAATACAACCCCTGTTGTTGCAGACTGTCCCTGAGCTCTaGGGTCTCAACGCACACCCG +
Preference number: 4 (lower is better)
Translates to: GRTPIHYKLPPIQPLLLQTVPEL*GLNAHP
Trigger: CGGGTGTGCGTTGAGACCCCAGAGCTCAGGGACAGT...CTGCAACAACAGGGGTTGTATTGGGGGAAGTTTATAATGAATAGGTGTTCTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR TCA 90 bp GTGGCTATGGGTGCACAATTTCAGGGGGTTCGTGAACTCCAGTTAAGACTTGCCCCTGGCTGGTGCTTATaGTTGCAAAACTTGGATATG +
Preference number: 4 (lower is better)
Translates to: VAMGAQFQGVRELQLRLAPGWCL*LQNLDM
Trigger: CATATCCAAGTTTTGCAATCATAAGCACCAGCCAGG...GGCAAGTCTTAACTGGAGTTCACGAACCCCCTGAAATTGTGCACCCATAGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR TCA 90 bp GTGGCTATGGGTGCACAATTTCAGGGGGTTCGTGAACTCCAGTTAAGACTTGCCGCTTCTGCGAGCACTTaGGGTTTCCTTCTTATATTC +
Preference number: 4 (lower is better)
Translates to: VAMGAQFQGVRELQLRLAASAST*GFLLIF
Trigger: GAATATAAGAAGGAAACCTCAAGTGCTCGCAGAAGC...GGCAAGTCTTAACTGGAGTTCACGAACCCCCTGAAATTGTGCACCCATAGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR TCA 90 bp TGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGGGATGGCCGTTTCCTTaGGTCAAAAGCCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: WMQINAPIKFIISSSCLVGWPFP*VKSPAG
Trigger: TCCTGCTGGGCTTTTGACTCAAGGAAACGGCCATCC...CACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp AATCAGTTTGTAGAAGTTAGCATCAACCGGAATGCCAGGGTAAGGATTCACACCTCACTCAAGCCAGCCTaGGAAGGCCTTGGATGCAGA +
Preference number: 4 (lower is better)
Translates to: NQFVEVSINRNARVRIHTSLKPA*EGLGCR
Trigger: TCTGCATCCAAGGCCTTCTCAGGCTGGCTTGAGTGA...GGTGTGAATCCTTACCCTGGCATTCCGGTTGATGCTAACTTCTACAAACTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS-3UTR GCA 90 bp TCCCATGAAGCCCTGAGATTTGATCCGAGTCCGGGTGTATCTGAACTTCTCTTGGCCAAGGGAATTGTATaGACAGCACTTGACCAGGAA +
Preference number: 4 (lower is better)
Translates to: SHEALRFDPSPGVSELLLAKGIV*TALDQE
Trigger: TTCCTGGTCAAGTGCTGTGCATACAATTCCCTTGGC...CAAGAGAAGTTCAGATACACCCGGACTCGGATCAAATCTCAGGGCTTCATGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS-3UTR GCA 90 bp ATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGACATTGGTCCTGACAGTGTaGACGCCCCCAGCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: MQINAPIKFIISSSCLVTLVLTV*TPPAGS
Trigger: TGAACCTGCTGGGGGCGTGCACACTGTCAGGACCAA...TGTCACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR GCA 90 bp TCCCATGAAGCCCTGAGATTTGATCCGAGTCCGGGTGTATCTGAACTTCTCTTGATACATCGCTTCTTCTaGATCTGCCAGCTGACATCC +
Preference number: 4 (lower is better)
Translates to: SHEALRFDPSPGVSELLLIHRFF*ICQLTS
Trigger: GGATGTCAGCTGGCAGATGCAGAAGAAGCGATGTAT...CAAGAGAAGTTCAGATACACCCGGACTCGGATCAAATCTCAGGGCTTCATGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS-3UTR CCA 90 bp TGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGACAGGAAATGTTCCCTaGGGCGTCGACCAGCACTTG +
Preference number: 4 (lower is better)
Translates to: WMQINAPIKFIISSSCLVTGNVP*GVDQHL
Trigger: CAAGTGCTGGTCGACGCCCCAGGGAACATTTCCTGT...CACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CCA 90 bp CTGGAAGGAATGTGTAGGTGGCTATGGGTGCACAATTTCAGGGGGTTCGTGAACCAGACCAGGGCGTCCTaGTTTTCCATTTTTCTAAAG +
Preference number: 4 (lower is better)
Translates to: LEGMCRWLWVHNFRGFVNQTRAS*FSIFLK
Trigger: CTTTAGAAAAATGGAAAACCAGGACGCCCTGGTCTG...GTTCACGAACCCCCTGAAATTGTGCACCCATAGCCACCTACACATTCCTTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR CCA 90 bp AAACTAAATTGTTCCTCTACGAATCTTCGACCTGAGCCTGCGGAGAGAGTAGCCTTCCACGATCGGCTCTaGAACGCTCTCAGATATGCA +
Preference number: 4 (lower is better)
Translates to: KLNCSSTNLRPEPAERVAFHDRL*NALRYA
Trigger: TGCATATCTGAGAGCGTTCCAGAGCCGATCGTGGAA...GGCTACTCTCTCCGCAGGCTCAGGTCGAAGATTCGTAGAGGAACAATTTAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS-3UTR CCA 90 bp AGGTGTGAGGACATTCCGAAACACGGCCATCCACATTCTGATACATCGCTTCTTTGCCCAGTTCATTTCTaGCACAGCACCTTATGTCCG +
Preference number: 4 (lower is better)
Translates to: RCEDIPKHGHPHSDTSLLCPVHF*HSTLCP
Trigger: CGGACATAAGGTGCTGTGCCAGAAATGAACTGGGCA...AAGAAGCGATGTATCAGAATGTGGATGGCCGTGTTTCGGAATGTCCTCACACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS-3UTR CCA 90 bp AGGTGTGAGGACATTCCGAAACACGGCCATCCACATTCTGATACATCGCTTCTTAGCCTGAGAAGGCCTTaGATGCAGATCAATGCTCCA +
Preference number: 4 (lower is better)
Translates to: RCEDIPKHGHPHSDTSLLSLRRP*MQINAP
Trigger: TGGAGCATTGATCTGCATCCAAGGCCTTCTCAGGCT...AAGAAGCGATGTATCAGAATGTGGATGGCCGTGTTTCGGAATGTCCTCACACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS-3UTR TCA 90 bp GTGGCTATGGGTGCACAATTTCAGGGGGTTCGTGAACTCCAGTTAAGACTTGCCTTGCTCACAAGGAAATaGTTTTCGAGAGAAGGTCCA +
Preference number: 4 (lower is better)
Translates to: VAMGAQFQGVRELQLRLALLTRK*FSREGP
Trigger: TGGACCTTCTCTCGAAAATCATTTCCTTGTGAGCAA...GGCAAGTCTTAACTGGAGTTCACGAACCCCCTGAAATTGTGCACCCATAGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR TCA 90 bp TCCCATGAAGCCCTGAGATTTGATCCGAGTCCGGGTGTATCTGAACTTCTCTTGGCTTCTGCGAGCACTTaGGGTTTCCTTCTTATATTC +
Preference number: 4 (lower is better)
Translates to: SHEALRFDPSPGVSELLLASAST*GFLLIF
Trigger: GAATATAAGAAGGAAACCTCAAGTGCTCGCAGAAGC...CAAGAGAAGTTCAGATACACCCGGACTCGGATCAAATCTCAGGGCTTCATGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS-3UTR TCA 90 bp TGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGGAGTCCGGGTGTATCTaGACTTCTCTTGAACCAGGC +
Preference number: 4 (lower is better)
Translates to: WMQINAPIKFIISSSCLVESGCI*TSLEPG
Trigger: GCCTGGTTCAAGAGAAGTTCAGATACACCCGGACTC...CACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp TGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGGCGGCCAGGTCTCTGTaGACACACGACTTAAATTCC +
Preference number: 4 (lower is better)
Translates to: WMQINAPIKFIISSSCLVAARSL*THDLNS
Trigger: GGAATTTAAGTCGTGTGTTCACAGAGACCTGGCCGC...CACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp TGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGGACGGGCATTGCCCCTaGCAACATAGTTGGAATCAC +
Preference number: 4 (lower is better)
Translates to: WMQINAPIKFIISSSCLVDGHCP*QHSWNH
Trigger: GTGATTCCAACTATGTTGTCAGGGGCAATGCCCGTC...CACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp ATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGACATACGAATCTTCGACCTaGGCCTGCGGAGAGAGTAGC +
Preference number: 4 (lower is better)
Translates to: MQINAPIKFIISSSCLVTYESST*ACGESS
Trigger: GCTACTCTCTCCGCAGGCTCAGGTCGAAGATTCGTA...TGTCACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp TTGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTTCACTCAAGCCAGCCTaGGAAGGCCTTGGATGCAGA +
Preference number: 4 (lower is better)
Translates to: LDADQCSNKVHYQLLLPCSLKPA*EGLGCR
Trigger: TCTGCATCCAAGGCCTTCTCAGGCTGGCTTGAGTGA...ACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp ATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGACACCTCCATGTTACTTCTaGCTGGCCCTGAGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: MQINAPIKFIISSSCLVTPPCYF*LALSLG
Trigger: TCCCAGACTCAGGGCCAGTCAGAAGTAACATGGAGG...TGTCACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR GCA 90 bp TACAGCCTGTTAGGGATAGGTGGAGGGATGAAGTCCTTAAAACTAAATTGTTCCGAACGCTCTCAGATATaGAGACCAGGGCGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: YSLLGIGGGMKSLKLNCSERSQI*RPGRPG
Trigger: ACCAGGACGCCCTGGTCTGCATATCTGAGAGCGTTC...GGAACAATTTAGTTTTAAGGACTTCATCCCTCCACCTATCCCTAACAGGCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR GCA 90 bp GGTAGAACACCTATTCATTATAAACTTCCCCCAATACAACCCCTGTTGTTGCAGGCCTGGTGCATTCCCTaGCCAGTTCATTTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: GRTPIHYKLPPIQPLLLQAWCIP*PVHFWH
Trigger: GTGCCAGAAATGAACTGGGCAGGGAATGCACCAGGC...CTGCAACAACAGGGGTTGTATTGGGGGAAGTTTATAATGAATAGGTGTTCTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR GCA 90 bp GTGGCTATGGGTGCACAATTTCAGGGGGTTCGTGAACTCCAGTTAAGACTTGCCCTCTTGAACCAGGCATaGTGGAATTTGGATGTGATT +
Preference number: 4 (lower is better)
Translates to: VAMGAQFQGVRELQLRLALLNQA*WNLDVI
Trigger: AATCACATCCAAATTCCAGCATGCCTGGTTCAAGAG...GGCAAGTCTTAACTGGAGTTCACGAACCCCCTGAAATTGTGCACCCATAGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR GCA 90 bp GAGAAGGCCTTGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCGTAGGTGGCTATGGGTaGACAATTTCAGGGGGTTCG +
Preference number: 4 (lower is better)
Translates to: EKALDADQCSNKVHYQLLVGGYG*TISGGS
Trigger: CGAACCCCCTGAAATTGTGCACCCATAGCCACCTAC...GAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCAAGGCCTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR CCA 90 bp GGTAGAACACCTATTCATTATAAACTTCCCCCAATACAACCCCTGTTGTTGCAGACAGGAAATGTTCCCTaGGGCGTCGACCAGCACTTG +
Preference number: 4 (lower is better)
Translates to: GRTPIHYKLPPIQPLLLQTGNVP*GVDQHL
Trigger: CAAGTGCTGGTCGACGCCCCAGGGAACATTTCCTGT...CTGCAACAACAGGGGTTGTATTGGGGGAAGTTTATAATGAATAGGTGTTCTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR CCA 90 bp TCCCATGAAGCCCTGAGATTTGATCCGAGTCCGGGTGTATCTGAACTTCTCTTGCAGACCAGGGCGTCCTaGTTTTCCATTTTTCTAAAG +
Preference number: 4 (lower is better)
Translates to: SHEALRFDPSPGVSELLLQTRAS*FSIFLK
Trigger: CTTTAGAAAAATGGAAAACCAGGACGCCCTGGTCTG...CAAGAGAAGTTCAGATACACCCGGACTCGGATCAAATCTCAGGGCTTCATGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS-3UTR CCA 90 bp GAGAAGGCCTTGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCTTCACCACTTTCCCGTaGGTGACAAGCACGTTCCTG +
Preference number: 4 (lower is better)
Translates to: EKALDADQCSNKVHYQLLFTTFP*VTSTFL
Trigger: CAGGAACGTGCTTGTCACCCACGGGAAAGTGGTGAA...GAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCAAGGCCTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CCA 90 bp TGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGTTCACCACTTTCCCGTaGGTGACAAGCACGTTCCTG +
Preference number: 4 (lower is better)
Translates to: WMQINAPIKFIISSSCLVFTTFP*VTSTFL
Trigger: CAGGAACGTGCTTGTCACCCACGGGAAAGTGGTGAA...CACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp TTGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTAGATGTTGTCTTGGATaGAAGGGAAGGGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: LDADQCSNKVHYQLLLPCRCCLG*KGRGLE
Trigger: CTCCAGGCCCCTTCCCTTTCATCCAAGACAACATCT...ACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp GGGATGAAGTCCTTAAAACTAAATTGTTCCTCTACGAATCTTCGACCTGAGCCTGCGGCCAGGTCTCTGTaGACACACGACTTAAATTCC +
Preference number: 4 (lower is better)
Translates to: GMKSLKLNCSSTNLRPEPAARSL*THDLNS
Trigger: GGAATTTAAGTCGTGTGTTCACAGAGACCTGGCCGC...AGGCTCAGGTCGAAGATTCGTAGAGGAACAATTTAGTTTTAAGGACTTCATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS-3UTR TCA 90 bp GGTAGAACACCTATTCATTATAAACTTCCCCCAATACAACCCCTGTTGTTGCAGGACGGGCATTGCCCCTaGCAACATAGTTGGAATCAC +
Preference number: 4 (lower is better)
Translates to: GRTPIHYKLPPIQPLLLQDGHCP*QHSWNH
Trigger: GTGATTCCAACTATGTTGTCAGGGGCAATGCCCGTC...CTGCAACAACAGGGGTTGTATTGGGGGAAGTTTATAATGAATAGGTGTTCTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR TCA 90 bp TGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGCGGCCATCCACATTCTaGTACATCGCTTCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: WMQINAPIKFIISSSCLVRPSTF*YIASSA
Trigger: TGCAGAAGAAGCGATGTATCAGAATGTGGATGGCCG...CACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR GCA 90 bp TGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGACTTGCCGATGCTTCTaGGAGCACTTGAGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: WMQINAPIKFIISSSCLVTCRCF*EHLRFP
Trigger: AGGAAACCTCAAGTGCTCGCAGAAGCATCGGCAAGT...CACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CCA 90 bp GAGAAGGCCTTGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCTGCCCAGTTCATTTCTaGCACAGCACCTTATGTCCG +
Preference number: 4 (lower is better)
Translates to: EKALDADQCSNKVHYQLLCPVHF*HSTLCP
Trigger: CGGACATAAGGTGCTGTGCCAGAAATGAACTGGGCA...GAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCAAGGCCTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CCA 90 bp TGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGATGTGTAGGTGGCTATaGGTGCACAATTTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: WMQINAPIKFIISSSCLVMCRWL*VHNFRG
Trigger: CCCCCTGAAATTGTGCACCCATAGCCACCTACACAT...CACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR TCA 90 bp GGTAGAACACCTATTCATTATAAACTTCCCCCAATACAACCCCTGTTGTTGCAGCCAGCACTTGCAGTGTaGTGGAAGCAGATACATCCA +
Preference number: 4 (lower is better)
Translates to: GRTPIHYKLPPIQPLLLQPALAV*WKQIHP
Trigger: TGGATGTATCTGCTTCCATCACACTGCAAGTGCTGG...CTGCAACAACAGGGGTTGTATTGGGGGAAGTTTATAATGAATAGGTGTTCTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR TCA 90 bp GATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGACTTTCTAATTCCCAGGTaGGCCCGAATCCATGGTTCA +
Preference number: 4 (lower is better)
Translates to: DADQCSNKVHYQLLLPCDFLIPR*ARIHGS
Trigger: TGAACCATGGATTCGGGCTCACCTGGGAATTAGAAA...GTCACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp AATATACTGTACTTCAGGTACACAATTCACTCAAGCCAGCCTGAGAAGGCCTTGTTTCTAATTCCCAGGTaGGCCCGAATCCATGGTTCA +
Preference number: 4 (lower is better)
Translates to: NILYFRYTIHSSQPEKALFLIPR*ARIHGS
Trigger: TGAACCATGGATTCGGGCTCACCTGGGAATTAGAAA...CAAGGCCTTCTCAGGCTGGCTTGAGTGAATTGTGTACCTGAAGTACAGTATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp TACAGCCTGTTAGGGATAGGTGGAGGGATGAAGTCCTTAAAACTAAATTGTTCCGAAGTACTCATTATCTaGGGAGCCGGTCACCTGTAC +
Preference number: 4 (lower is better)
Translates to: YSLLGIGGGMKSLKLNCSEVLII*GAGHLY
Trigger: GTACAGGTGACCGGCTCCTCAGATAATGAGTACTTC...GGAACAATTTAGTTTTAAGGACTTCATCCCTCCACCTATCCCTAACAGGCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp GGGATGAAGTCCTTAAAACTAAATTGTTCCTCTACGAATCTTCGACCTGAGCCTCGGCCATCCACATTCTaGTACATCGCTTCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: GMKSLKLNCSSTNLRPEPRPSTF*YIASSA
Trigger: TGCAGAAGAAGCGATGTATCAGAATGTGGATGGCCG...AGGCTCAGGTCGAAGATTCGTAGAGGAACAATTTAGTTTTAAGGACTTCATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS-3UTR TCA 90 bp GATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGACAATCCATCTCTCTGCTaGAAGGTCGCCTGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: DADQCSNKVHYQLLLPCDNPSLC*KVACFG
Trigger: ACCAAAACAGGCGACCTTTCAGCAGAGAGATGGATT...GTCACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp GAGAAGGCCTTGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCAATCCATCTCTCTGCTaGAAGGTCGCCTGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: EKALDADQCSNKVHYQLLNPSLC*KVACFG
Trigger: ACCAAAACAGGCGACCTTTCAGCAGAGAGATGGATT...GAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCAAGGCCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR GCA 90 bp ATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGACAACTTGCCGATGCTTCTaGGAGCACTTGAGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: MQINAPIKFIISSSCLVTTCRCF*EHLRFP
Trigger: AGGAAACCTCAAGTGCTCGCAGAAGCATCGGCAAGT...TGTCACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR GCA 90 bp GAGAAGGCCTTGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCATACATCGCTTCTTCTaGATCTGCCAGCTGACATCC +
Preference number: 4 (lower is better)
Translates to: EKALDADQCSNKVHYQLLIHRFF*ICQLTS
Trigger: GGATGTCAGCTGGCAGATGCAGAAGAAGCGATGTAT...GAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCAAGGCCTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CCA 90 bp GGTAGAACACCTATTCATTATAAACTTCCCCCAATACAACCCCTGTTGTTGCAGTTCCACGATCGGCTCTaGAACGCTCTCAGATATGCA +
Preference number: 4 (lower is better)
Translates to: GRTPIHYKLPPIQPLLLQFHDRL*NALRYA
Trigger: TGCATATCTGAGAGCGTTCCAGAGCCGATCGTGGAA...CTGCAACAACAGGGGTTGTATTGGGGGAAGTTTATAATGAATAGGTGTTCTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR CCA 90 bp TACAGCCTGTTAGGGATAGGTGGAGGGATGAAGTCCTTAAAACTAAATTGTTCCTCGTGGCTTCCCAGCTaGGTCATCATCTTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: YSLLGIGGGMKSLKLNCSSWLPS*VIILSS
Trigger: AGAACTCAAGATGATGACCCAGCTGGGAAGCCACGA...GGAACAATTTAGTTTTAAGGACTTCATCCCTCCACCTATCCCTAACAGGCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp TTTACAAGAATATACTGTACTTCAGGTACACAATTCACTCAAGCCAGCCTGAGAACAGCTTTCCCCCTGTaGATCGCAAAGCACCCATTC +
Preference number: 4 (lower is better)
Translates to: FTRIYCTSGTQFTQASLRTAFPL*IAKHPF
Trigger: GAATGGGTGCTTTGCGATTCACAGGGGGAAAGCTGT...TCTCAGGCTGGCTTGAGTGAATTGTGTACCTGAAGTACAGTATATTCTTGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp ATTTACAAGAATATACTGTACTTCAGGTACACAATTCACTCAAGCCAGCCTGAGACAGCTTTCCCCCTGTaGATCGCAAAGCACCCATTC +
Preference number: 4 (lower is better)
Translates to: IYKNILYFRYTIHSSQPETAFPL*IAKHPF
Trigger: GAATGGGTGCTTTGCGATTCACAGGGGGAAAGCTGT...CTCAGGCTGGCTTGAGTGAATTGTGTACCTGAAGTACAGTATATTCTTGTAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp TGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGCCTGGCTGGTGCTTATaGTTGCAAAACTTGGATATG +
Preference number: 4 (lower is better)
Translates to: WMQINAPIKFIISSSCLVPGWCL*LQNLDM
Trigger: CATATCCAAGTTTTGCAATCATAAGCACCAGCCAGG...CACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp GGGATGAAGTCCTTAAAACTAAATTGTTCCTCTACGAATCTTCGACCTGAGCCTTGTATGCACAGCACTTaGCCAGGAACCCTTTTATGG +
Preference number: 4 (lower is better)
Translates to: GMKSLKLNCSSTNLRPEPCMHST*PGTLLW
Trigger: CCATAAAAGGGTTCCTGGTCAAGTGCTGTGCATACA...AGGCTCAGGTCGAAGATTCGTAGAGGAACAATTTAGTTTTAAGGACTTCATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS-3UTR TCA 90 bp TTTACAAGAATATACTGTACTTCAGGTACACAATTCACTCAAGCCAGCCTGAGAAGATGTTGTCTTGGATaGAAGGGAAGGGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: FTRIYCTSGTQFTQASLRRCCLG*KGRGLE
Trigger: CTCCAGGCCCCTTCCCTTTCATCCAAGACAACATCT...TCTCAGGCTGGCTTGAGTGAATTGTGTACCTGAAGTACAGTATATTCTTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp AATCAGTTTGTAGAAGTTAGCATCAACCGGAATGCCAGGGTAAGGATTCACACCCATCATCTTGAGTTCTaGCATGAGTGCCTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: NQFVEVSINRNARVRIHTHHLEF*HECLSF
Trigger: GAAAGAGAGGCACTCATGTCAGAACTCAAGATGATG...GGTGTGAATCCTTACCCTGGCATTCCGGTTGATGCTAACTTCTACAAACTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS-3UTR TCA 90 bp ATTTACAAGAATATACTGTACTTCAGGTACACAATTCACTCAAGCCAGCCTGAGATTCCCATGAAGCCCTaGGATTTGATCCGAGTCCGG +
Preference number: 4 (lower is better)
Translates to: IYKNILYFRYTIHSSQPEIPMKP*DLIRVR
Trigger: CCGGACTCGGATCAAATCTCAGGGCTTCATGGGAAT...CTCAGGCTGGCTTGAGTGAATTGTGTACCTGAAGTACAGTATATTCTTGTAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp TTGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTTCTGCATCTGCCAGCTaGCATCCTAAAAACGAAGTC +
Preference number: 4 (lower is better)
Translates to: LDADQCSNKVHYQLLLPCSASAS*HPKNEV
Trigger: GACTTCGTTTTTAGGATGTCAGCTGGCAGATGCAGA...ACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp AGGTGGAGGGATGAAGTCCTTAAAACTAAATTGTTCCTCTACGAATCTTCGACCTCTGCATCTGCCAGCTaGCATCCTAAAAACGAAGTC +
Preference number: 4 (lower is better)
Translates to: RWRDEVLKTKLFLYESSTSASAS*HPKNEV
Trigger: GACTTCGTTTTTAGGATGTCAGCTGGCAGATGCAGA...GGTCGAAGATTCGTAGAGGAACAATTTAGTTTTAAGGACTTCATCCCTCCACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS-3UTR GCA 90 bp ATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGACACAATTCAGGGAGCTGTaGTTAAAGACCCAGAGACAG +
Preference number: 4 (lower is better)
Translates to: MQINAPIKFIISSSCLVTQFREL*LKTQRQ
Trigger: CTGTCTCTGGGTCTTTAAGCACAGCTCCCTGAATTG...TGTCACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR GCA 90 bp GAGAAGGCCTTGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCTCATGTTTAGAGTACTaGTCGACACCCACTGTCCAA +
Preference number: 4 (lower is better)
Translates to: EKALDADQCSNKVHYQLLSCLEY*STPTVQ
Trigger: TTGGACAGTGGGTGTCGAGCAGTACTCTAAACATGA...GAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCAAGGCCTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR GCA 90 bp ATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGACAGCCAAGGGAATTGTATaGACAGCACTTGACCAGGAA +
Preference number: 4 (lower is better)
Translates to: MQINAPIKFIISSSCLVTAKGIV*TALDQE
Trigger: TTCCTGGTCAAGTGCTGTGCATACAATTCCCTTGGC...TGTCACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR GCA 90 bp GAGAAGGCCTTGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCTCGTCTCACAAGATGTaGCAAGGGAATTGTATGCAC +
Preference number: 4 (lower is better)
Translates to: EKALDADQCSNKVHYQLLSSHKM*QGNCMH
Trigger: GTGCATACAATTCCCTTGGCACATCTTGTGAGACGA...GAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCAAGGCCTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CCA 90 bp AGCCAGCCTGAGAAGGCCTTGGATGCAGATCAATGCTCCAATAAAGTTCATTATCCAAAGCTGATTGACTaGGATGCTTTGAAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: SQPEKALDADQCSNKVHYPKLID*DALKRN
Trigger: GTTCCTCTTCAAAGCATCCCAGTCAATCAGCTTTGG...ATAATGAACTTTATTGGAGCATTGATCTGCATCCAAGGCCTTCTCAGGCTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CCA 90 bp GATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGACTCTCTTCTGTGCAGTTaGGAGACTTGTCTGAACACT +
Preference number: 4 (lower is better)
Translates to: DADQCSNKVHYQLLLPCDSLLCS*ETCLNT
Trigger: AGTGTTCAGACAAGTCTCCCAACTGCACAGAAGAGA...GTCACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CCA 90 bp AGCCAGCCTGAGAAGGCCTTGGATGCAGATCAATGCTCCAATAAAGTTCATTATTCTCTTCTGTGCAGTTaGGAGACTTGTCTGAACACT +
Preference number: 4 (lower is better)
Translates to: SQPEKALDADQCSNKVHYSLLCS*ETCLNT
Trigger: AGTGTTCAGACAAGTCTCCCAACTGCACAGAAGAGA...ATAATGAACTTTATTGGAGCATTGATCTGCATCCAAGGCCTTCTCAGGCTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp TACAGCCTGTTAGGGATAGGTGGAGGGATGAAGTCCTTAAAACTAAATTGTTCCGATTTAGATCTATTGTaGACAGCCTGGTGCATTCCC +
Preference number: 4 (lower is better)
Translates to: YSLLGIGGGMKSLKLNCSDLDLL*TAWCIP
Trigger: GGGAATGCACCAGGCTGTTCACAATAGATCTAAATC...GGAACAATTTAGTTTTAAGGACTTCATCCCTCCACCTATCCCTAACAGGCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp ATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGACAGATTTAGATCTATTGTaGACAGCCTGGTGCATTCCC +
Preference number: 4 (lower is better)
Translates to: MQINAPIKFIISSSCLVTDLDLL*TAWCIP
Trigger: GGGAATGCACCAGGCTGTTCACAATAGATCTAAATC...TGTCACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp AATATACTGTACTTCAGGTACACAATTCACTCAAGCCAGCCTGAGAAGGCCTTGTTGACTGGGATGCTTTaGAGAGGAACAAGTGTAGTA +
Preference number: 4 (lower is better)
Translates to: NILYFRYTIHSSQPEKALLTGML*RGTSVV
Trigger: TACTACACTTGTTCCTCTTCAAAGCATCCCAGTCAA...CAAGGCCTTCTCAGGCTGGCTTGAGTGAATTGTGTACCTGAAGTACAGTATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp TGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGTTGCTCACAAGGAAATaGTTTTCGAGAGAAGGTCCA +
Preference number: 4 (lower is better)
Translates to: WMQINAPIKFIISSSCLVLLTRK*FSREGP
Trigger: TGGACCTTCTCTCGAAAATCATTTCCTTGTGAGCAA...CACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp AATCAGTTTGTAGAAGTTAGCATCAACCGGAATGCCAGGGTAAGGATTCACACCGGGTTAAAACGACAATaGAGAGGAGACAAACACCAA +
Preference number: 4 (lower is better)
Translates to: NQFVEVSINRNARVRIHTGLKRQ*RGDKHQ
Trigger: TTGGTGTTTGTCTCCTCTTCATTGTCGTTTTAACCC...GGTGTGAATCCTTACCCTGGCATTCCGGTTGATGCTAACTTCTACAAACTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS-3UTR TCA 90 bp GGTAGAACACCTATTCATTATAAACTTCCCCCAATACAACCCCTGTTGTTGCAGCATCATCTTGAGTTCTaGCATGAGTGCCTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: GRTPIHYKLPPIQPLLLQHHLEF*HECLSF
Trigger: GAAAGAGAGGCACTCATGTCAGAACTCAAGATGATG...CTGCAACAACAGGGGTTGTATTGGGGGAAGTTTATAATGAATAGGTGTTCTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR TCA 90 bp GATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGACGCTGGAATTTGGATGTaGTTGGAAAGTGGGGTAAAA +
Preference number: 4 (lower is better)
Translates to: DADQCSNKVHYQLLLPCDAGIWM*LESGVK
Trigger: TTTTACCCCACTTTCCAATCACATCCAAATTCCAGC...GTCACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR TCA 90 bp TACAGCCTGTTAGGGATAGGTGGAGGGATGAAGTCCTTAAAACTAAATTGTTCCGCTCCTCCTGCCTTGTaGCAGGATGATTTGATTTTA +
Preference number: 4 (lower is better)
Translates to: YSLLGIGGGMKSLKLNCSAPPAL*QDDLIL
Trigger: TAAAATCAAATCATCCTGTCACAAGGCAGGAGGAGC...GGAACAATTTAGTTTTAAGGACTTCATCCCTCCACCTATCCCTAACAGGCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp TACAGCCTGTTAGGGATAGGTGGAGGGATGAAGTCCTTAAAACTAAATTGTTCCTCATTCTTTGGTTTCTaGACTCAGCCCACTTTCCCT +
Preference number: 4 (lower is better)
Translates to: YSLLGIGGGMKSLKLNCSSFFGF*TQPTFP
Trigger: AGGGAAAGTGGGCTGAGTTCAGAAACCAAAGAATGA...GGAACAATTTAGTTTTAAGGACTTCATCCCTCCACCTATCCCTAACAGGCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS-3UTR TCA 90 bp AATCAGTTTGTAGAAGTTAGCATCAACCGGAATGCCAGGGTAAGGATTCACACCTATCTGAACTTCTCTTaGACCAGGCATGATCGATCT +
Preference number: 4 (lower is better)
Translates to: NQFVEVSINRNARVRIHTYLNFS*TRHDRS
Trigger: AGATCGATCATGCCTGGTTCAAGAGAAGTTCAGATA...GGTGTGAATCCTTACCCTGGCATTCCGGTTGATGCTAACTTCTACAAACTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS-3UTR GCA 90 bp ATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGACATCATCTCAAAGTAGTTaGCCTCCTCGAGTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: MQINAPIKFIISSSCLVTSSQSS*PPRVLC
Trigger: ACAAAGCACTCGAGGAGGGCAACTACTTTGAGATGA...TGTCACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR GCA 90 bp GGGATGAAGTCCTTAAAACTAAATTGTTCCTCTACGAATCTTCGACCTGAGCCTTCATCTCAAAGTAGTTaGCCTCCTCGAGTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: GMKSLKLNCSSTNLRPEPSSQSS*PPRVLC
Trigger: ACAAAGCACTCGAGGAGGGCAACTACTTTGAGATGA...AGGCTCAGGTCGAAGATTCGTAGAGGAACAATTTAGTTTTAAGGACTTCATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS-3UTR GCA 90 bp TACAGCCTGTTAGGGATAGGTGGAGGGATGAAGTCCTTAAAACTAAATTGTTCCTCGTCTCACAAGATGTaGCAAGGGAATTGTATGCAC +
Preference number: 4 (lower is better)
Translates to: YSLLGIGGGMKSLKLNCSSSHKM*QGNCMH
Trigger: GTGCATACAATTCCCTTGGCACATCTTGTGAGACGA...GGAACAATTTAGTTTTAAGGACTTCATCCCTCCACCTATCCCTAACAGGCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CCA 90 bp TGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGGGGATTCTGATACCATaGGATATGATGATGACTTCC +
Preference number: 4 (lower is better)
Translates to: WMQINAPIKFIISSSCLVGILIP*DMMMTS
Trigger: GGAAGTCATCATCATATCCCATGGTATCAGAATCCC...CACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CCA 90 bp TTGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTCCAAAGCTGATTGACTaGGATGCTTTGAAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: LDADQCSNKVHYQLLLPCPKLID*DALKRN
Trigger: GTTCCTCTTCAAAGCATCCCAGTCAATCAGCTTTGG...ACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CCA 90 bp GAGAAGGCCTTGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCCAGGAACCCTTTTATaGCTTCACTCATGTTTAGAG +
Preference number: 4 (lower is better)
Translates to: EKALDADQCSNKVHYQLLPGTLL*LHSCLE
Trigger: CTCTAAACATGAGTGAAGCCATAAAAGGGTTCCTGG...GAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCAAGGCCTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CCA 90 bp AGCCAGCCTGAGAAGGCCTTGGATGCAGATCAATGCTCCAATAAAGTTCATTATCCAGGAACCCTTTTATaGCTTCACTCATGTTTAGAG +
Preference number: 4 (lower is better)
Translates to: SQPEKALDADQCSNKVHYPGTLL*LHSCLE
Trigger: CTCTAAACATGAGTGAAGCCATAAAAGGGTTCCTGG...ATAATGAACTTTATTGGAGCATTGATCTGCATCCAAGGCCTTCTCAGGCTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CCA 90 bp AGCCAGCCTGAGAAGGCCTTGGATGCAGATCAATGCTCCAATAAAGTTCATTATTTGAACCAGGCATGCTaGAATTTGGATGTGATTGGA +
Preference number: 4 (lower is better)
Translates to: SQPEKALDADQCSNKVHYLNQAC*NLDVIG
Trigger: TCCAATCACATCCAAATTCCAGCATGCCTGGTTCAA...ATAATGAACTTTATTGGAGCATTGATCTGCATCCAAGGCCTTCTCAGGCTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR CCA 90 bp ATTTACAAGAATATACTGTACTTCAGGTACACAATTCACTCAAGCCAGCCTGAGAGCCTGAGAAGGCCTTaGATGCAGATCAATGCTCCA +
Preference number: 4 (lower is better)
Translates to: IYKNILYFRYTIHSSQPESLRRP*MQINAP
Trigger: TGGAGCATTGATCTGCATCCAAGGCCTTCTCAGGCT...CTCAGGCTGGCTTGAGTGAATTGTGTACCTGAAGTACAGTATATTCTTGTAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CCA 90 bp TTGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGAAGGAATGTGTAGGTaGCTATGGGTGCACAATTTC +
Preference number: 4 (lower is better)
Translates to: LDADQCSNKVHYQLLLPCEGMCR*LWVHNF
Trigger: GAAATTGTGCACCCATAGCCACCTACACATTCCTTC...ACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR CCA 90 bp AATATACTGTACTTCAGGTACACAATTCACTCAAGCCAGCCTGAGAAGGCCTTGATCGATCTCATTCTTTaGTTTCTGAACTCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: NILYFRYTIHSSQPEKALIDLIL*FLNSAH
Trigger: GTGGGCTGAGTTCAGAAACCAAAGAATGAGATCGAT...CAAGGCCTTCTCAGGCTGGCTTGAGTGAATTGTGTACCTGAAGTACAGTATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380987.2
3UTR CAA 72 bp AGGTACACAATTCACTCAAGCCAGCCTGAGAAGGCCTaGGATGCAGATCAATGCTCCAATAAAGTTCATTAT +
Preference number: 4 (lower is better)
Translates to: RYTIHSSQPEKA*DADQCSNKVHY
Trigger: ATAATGAACTTTATTGGAGCATTGATCTGCATCCAAGGCCTTCTCAGGCTGGCTTGAGTGAATTGTGTACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp TACAGCCTGTTAGGGATAGGTGGAGGGATGAAGTCCTTAAAACTAAATTGTTCCAATCCATGGTTCACATaGACAGCTTTGCACCTTATC +
Preference number: 4 (lower is better)
Translates to: YSLLGIGGGMKSLKLNCSNPWFT*TALHLI
Trigger: GATAAGGTGCAAAGCTGTTCATGTGAACCATGGATT...GGAACAATTTAGTTTTAAGGACTTCATCCCTCCACCTATCCCTAACAGGCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp AGGTGGAGGGATGAAGTCCTTAAAACTAAATTGTTCCTCTACGAATCTTCGACCAATCCATGGTTCACATaGACAGCTTTGCACCTTATC +
Preference number: 4 (lower is better)
Translates to: RWRDEVLKTKLFLYESSTNPWFT*TALHLI
Trigger: GATAAGGTGCAAAGCTGTTCATGTGAACCATGGATT...GGTCGAAGATTCGTAGAGGAACAATTTAGTTTTAAGGACTTCATCCCTCCACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS-3UTR TCA 90 bp TACAGCCTGTTAGGGATAGGTGGAGGGATGAAGTCCTTAAAACTAAATTGTTCCTTGACTGGGATGCTTTaGAGAGGAACAAGTGTAGTA +
Preference number: 4 (lower is better)
Translates to: YSLLGIGGGMKSLKLNCSLTGML*RGTSVV
Trigger: TACTACACTTGTTCCTCTTCAAAGCATCCCAGTCAA...GGAACAATTTAGTTTTAAGGACTTCATCCCTCCACCTATCCCTAACAGGCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp ATTTACAAGAATATACTGTACTTCAGGTACACAATTCACTCAAGCCAGCCTGAGTGTATGCACAGCACTTaGCCAGGAACCCTTTTATGG +
Preference number: 4 (lower is better)
Translates to: IYKNILYFRYTIHSSQPECMHST*PGTLLW
Trigger: CCATAAAAGGGTTCCTGGTCAAGTGCTGTGCATACA...CTCAGGCTGGCTTGAGTGAATTGTGTACCTGAAGTACAGTATATTCTTGTAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp GGTAGAACACCTATTCATTATAAACTTCCCCCAATACAACCCCTGTTGTTGCAGTATCTGAACTTCTCTTaGACCAGGCATGCTGGAATT +
Preference number: 4 (lower is better)
Translates to: GRTPIHYKLPPIQPLLLQYLNFS*TRHAGI
Trigger: AATTCCAGCATGCCTGGTTCAAGAGAAGTTCAGATA...CTGCAACAACAGGGGTTGTATTGGGGGAAGTTTATAATGAATAGGTGTTCTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR TCA 90 bp ATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGACAAGTTGGAATCACTCATaGTATCTCGAGCCAATCCAA +
Preference number: 4 (lower is better)
Translates to: MQINAPIKFIISSSCLVTSWNHS*YLEPIQ
Trigger: TTGGATTGGCTCGAGATATCATGAGTGATTCCAACT...TGTCACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp GATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGACACTGGAATTTGGATGTaGTTGGAAAGTGGGGTAAAA +
Preference number: 4 (lower is better)
Translates to: DADQCSNKVHYQLLLPCDTGIWM*LESGVK
Trigger: TTTTACCCCACTTTCCAATCACATCCAAATTCCAGT...GTCACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS-3UTR CCA 90 bp TACAGCCTGTTAGGGATAGGTGGAGGGATGAAGTCCTTAAAACTAAATTGTTCCGGGATTCTGATACCATaGGATATGATGATGACTTCC +
Preference number: 4 (lower is better)
Translates to: YSLLGIGGGMKSLKLNCSGILIP*DMMMTS
Trigger: GGAAGTCATCATCATATCCCATGGTATCAGAATCCC...GGAACAATTTAGTTTTAAGGACTTCATCCCTCCACCTATCCCTAACAGGCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CCA 90 bp GGTAGAACACCTATTCATTATAAACTTCCCCCAATACAACCCCTGTTGTTGCAGCGTACATCTGATTTGTaGGTAGGCTTTAAACCTGAC +
Preference number: 4 (lower is better)
Translates to: GRTPIHYKLPPIQPLLLQRTSDL*VGFKPD
Trigger: GTCAGGTTTAAAGCCTACCCACAAATCAGATGTACG...CTGCAACAACAGGGGTTGTATTGGGGGAAGTTTATAATGAATAGGTGTTCTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR CCA 90 bp GGGATGAAGTCCTTAAAACTAAATTGTTCCTCTACGAATCTTCGACCTGAGCCTCGTACATCTGATTTGTaGGTAGGCTTTAAACCTGAC +
Preference number: 4 (lower is better)
Translates to: GMKSLKLNCSSTNLRPEPRTSDL*VGFKPD
Trigger: GTCAGGTTTAAAGCCTACCCACAAATCAGATGTACG...AGGCTCAGGTCGAAGATTCGTAGAGGAACAATTTAGTTTTAAGGACTTCATCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS-3UTR CCA 90 bp TACAGCCTGTTAGGGATAGGTGGAGGGATGAAGTCCTTAAAACTAAATTGTTCCATTTTGACGGCAACCTaGATTGAGACTCCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: YSLLGIGGGMKSLKLNCSILTAT*IETPVL
Trigger: CAAAACAGGAGTCTCAATCCAGGTTGCCGTCAAAAT...GGAACAATTTAGTTTTAAGGACTTCATCCCTCCACCTATCCCTAACAGGCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp GATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGACATCACAGGCAGATCTTaGTTTGTAATAGTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: DADQCSNKVHYQLLLPCDITGRS*FVIVPN
Trigger: ATTTGGGACTATTACAAATCAAGATCTGCCTGTGAT...GTCACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp TGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGTACTTCTTAGATAGTTaGGAAGATCACCATAGCAAC +
Preference number: 4 (lower is better)
Translates to: WMQINAPIKFIISSSCLVYFLDS*EDHHSN
Trigger: GTTGCTATGGTGATCTTCTCAACTATCTAAGAAGTA...CACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp ATTTACAAGAATATACTGTACTTCAGGTACACAATTCACTCAAGCCAGCCTGAGGCTCCTCCTGCCTTGTaGCAGGATGATTTGATTTTA +
Preference number: 4 (lower is better)
Translates to: IYKNILYFRYTIHSSQPEAPPAL*QDDLIL
Trigger: TAAAATCAAATCATCCTGTCACAAGGCAGGAGGAGC...CTCAGGCTGGCTTGAGTGAATTGTGTACCTGAAGTACAGTATATTCTTGTAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR GCA 90 bp TTGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTTCACATGAACAGCTTTaGACCTTATCCATAAGGGTT +
Preference number: 4 (lower is better)
Translates to: LDADQCSNKVHYQLLLPCSHEQL*TLSIRV
Trigger: AACCCTTATGGATAAGGTGCAAAGCTGTTCATGTGA...ACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CCA 90 bp TTGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTTGTACCATCTGTAGCTaGCTTTCATACCTAAATTGC +
Preference number: 4 (lower is better)
Translates to: LDADQCSNKVHYQLLLPCCTICS*LSYLNC
Trigger: GCAATTTAGGTATGAAAGCCAGCTACAGATGGTACA...ACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CCA 90 bp GGGATGAAGTCCTTAAAACTAAATTGTTCCTCTACGAATCTTCGACCTGAGCCTTGTACCATCTGTAGCTaGCTTTCATACCTAAATTGC +
Preference number: 4 (lower is better)
Translates to: GMKSLKLNCSSTNLRPEPCTICS*LSYLNC
Trigger: GCAATTTAGGTATGAAAGCCAGCTACAGATGGTACA...AGGCTCAGGTCGAAGATTCGTAGAGGAACAATTTAGTTTTAAGGACTTCATCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS-3UTR CCA 90 bp ATTTACAAGAATATACTGTACTTCAGGTACACAATTCACTCAAGCCAGCCTGAGCCTGTTAGGGATAGGTaGAGGGATGAAGTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: IYKNILYFRYTIHSSQPEPVRDR*RDEVLK
Trigger: TTTAAGGACTTCATCCCTCCACCTATCCCTAACAGG...CTCAGGCTGGCTTGAGTGAATTGTGTACCTGAAGTACAGTATATTCTTGTAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp CAATTTCAGGGGGTTCGTGAACTCCAGTTAAGACTTGCCCTAATTATACCATGTATCACAGGCAGATCTTaGTTTGTAATAGTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: QFQGVRELQLRLALIIPCITGRS*FVIVPN
Trigger: ATTTGGGACTATTACAAATCAAGATCTGCCTGTGAT...ACATGGTATAATTAGGGCAAGTCTTAACTGGAGTTCACGAACCCCCTGAAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR TCA 90 bp TTTACAAGAATATACTGTACTTCAGGTACACAATTCACTCAAGCCAGCCTGAGAGGGTTAAAACGACAATaGAGAGGAGACAAACACCAA +
Preference number: 4 (lower is better)
Translates to: FTRIYCTSGTQFTQASLRGLKRQ*RGDKHQ
Trigger: TTGGTGTTTGTCTCCTCTTCATTGTCGTTTTAACCC...TCTCAGGCTGGCTTGAGTGAATTGTGTACCTGAAGTACAGTATATTCTTGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp GGTAGAACACCTATTCATTATAAACTTCCCCCAATACAACCCCTGTTGTTGCAGATTCCTTTGGCAACTTaGTATGCAAAGCAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: GRTPIHYKLPPIQPLLLQIPLAT*YAKQRR
Trigger: TCTTCTTTGCTTTGCATATCAAGTTGCCAAAGGAAT...CTGCAACAACAGGGGTTGTATTGGGGGAAGTTTATAATGAATAGGTGTTCTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR TCA 90 bp TTTACAAGAATATACTGTACTTCAGGTACACAATTCACTCAAGCCAGCCTGAGAAGTTGGAATCACTCATaGTATCTCGAGCCAATCCAA +
Preference number: 4 (lower is better)
Translates to: FTRIYCTSGTQFTQASLRSWNHS*YLEPIQ
Trigger: TTGGATTGGCTCGAGATATCATGAGTGATTCCAACT...TCTCAGGCTGGCTTGAGTGAATTGTGTACCTGAAGTACAGTATATTCTTGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR TCA 90 bp ATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGACATGCCTTGTGACAGGATaGTTTGATTTTACAAAAGTC +
Preference number: 4 (lower is better)
Translates to: MQINAPIKFIISSSCLVTCLVTG*FDFTKV
Trigger: GACTTTTGTAAAATCAAATCATCCTGTCACAAGGCA...TGTCACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR GCA 90 bp GAGAAGGCCTTGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCAATTCCATAAGCTGTTaGGTTCATCACTTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: EKALDADQCSNKVHYQLLNSISC*VHHFSK
Trigger: TTTGGAAAAGTGATGAACGCAACAGCTTATGGAATT...GAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCAAGGCCTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CCA 90 bp GATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGACATAATTGTGGCAATGTaGTCTGAGGAGTTTGATTTA +
Preference number: 4 (lower is better)
Translates to: DADQCSNKVHYQLLLPCDIIVAM*SEEFDL
Trigger: TAAATCAAACTCCTCAGACCACATTGCCACAATTAT...GTCACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR GCA 90 bp ATTTACAAGAATATACTGTACTTCAGGTACACAATTCACTCAAGCCAGCCTGAGTCACATGAACAGCTTTaGACCTTATCCATAAGGGTT +
Preference number: 4 (lower is better)
Translates to: IYKNILYFRYTIHSSQPESHEQL*TLSIRV
Trigger: AACCCTTATGGATAAGGTGCAAAGCTGTTCATGTGA...CTCAGGCTGGCTTGAGTGAATTGTGTACCTGAAGTACAGTATATTCTTGTAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR GCA 90 bp CAATTTCAGGGGGTTCGTGAACTCCAGTTAAGACTTGCCCTAATTATACCATGTAATTCCATAAGCTGTTaGGTTCATCACTTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: QFQGVRELQLRLALIIPCNSISC*VHHFSK
Trigger: TTTGGAAAAGTGATGAACGCAACAGCTTATGGAATT...ACATGGTATAATTAGGGCAAGTCTTAACTGGAGTTCACGAACCCCCTGAAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR CCA 90 bp CAATTTCAGGGGGTTCGTGAACTCCAGTTAAGACTTGCCCTAATTATACCATGTATAATTGTGGCAATGTaGTCTGAGGAGTTTGATTTA +
Preference number: 4 (lower is better)
Translates to: QFQGVRELQLRLALIIPCIIVAM*SEEFDL
Trigger: TAAATCAAACTCCTCAGACCACATTGCCACAATTAT...ACATGGTATAATTAGGGCAAGTCTTAACTGGAGTTCACGAACCCCCTGAAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR TCA 90 bp ATTTACAAGAATATACTGTACTTCAGGTACACAATTCACTCAAGCCAGCCTGAGTGCCTTGTGACAGGATaGTTTGATTTTACAAAAGTC +
Preference number: 4 (lower is better)
Translates to: IYKNILYFRYTIHSSQPECLVTG*FDFTKV
Trigger: GACTTTTGTAAAATCAAATCATCCTGTCACAAGGCA...CTCAGGCTGGCTTGAGTGAATTGTGTACCTGAAGTACAGTATATTCTTGTAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS TCA 90 bp AGCAGATACATCCACTTCCACAGCGGCAGCTTCGTACACTGTCCCTaGGCTCTGGGGTCTCAACGCACACCCGAGGTCTTCCGGGGATTC +
Preference number: 5 (lower is better)
Translates to: SRYIHFHSGSFVHCP*ALGSQRTPEVFRGF
Trigger: GAATCCCCGGAAGACCTCGGGTGTGCGTTGAGACCCCAGAGCTCAGGGACAGTGTACGAAGCTGCCGCTGTGGAAGTGGATGTATCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS CCA 90 bp ACATCCACTTCCACAGCGGCAGCTTCGTACACTGTCCCTGAGCTCTaGGGTCTCAACGCACACCCGAGGTCTTCCGGGGATTCTGATACC +
Preference number: 5 (lower is better)
Translates to: TSTSTAAASYTVPEL*GLNAHPRSSGDSDT
Trigger: GGTATCAGAATCCCCGGAAGACCTCGGGTGTGCGTTGAGACCCCAGAGCTCAGGGACAGTGTACGAAGCTGCCGCTGTGGAAGTGGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS TCA 90 bp AGAGACAGGAAATGTTCCCTGGGGCGTCGACCAGCACTTGCAGTGTaGTGGAAGCAGATACATCCACTTCCACAGCGGCAGCTTCGTACA +
Preference number: 5 (lower is better)
Translates to: RDRKCSLGRRPALAV*WKQIHPLPQRQLRT
Trigger: TGTACGAAGCTGCCGCTGTGGAAGTGGATGTATCTGCTTCCATCACACTGCAAGTGCTGGTCGACGCCCCAGGGAACATTTCCTGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CAA 90 bp TCCCATGAAGCCCTGAGATTTGATCCGAGTCCGGGTGTATCTGAACTTCTCTTGGGCGTCGACCAGCACTaGCAGTGTGATGGAAGCAGA +
Preference number: 5 (lower is better)
Translates to: SHEALRFDPSPGVSELLLGVDQH*QCDGSR
Trigger: TCTGCTTCCATCACACTGCAAGTGCTGGTCGACGCC...CAAGAGAAGTTCAGATACACCCGGACTCGGATCAAATCTCAGGGCTTCATGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS-3UTR CAA 90 bp TTTGGTAGGTGTGAGGACATTCCGAAACACGGCCATCCACATTCTGATACATCGAACAGGACGCCTGACTaGCCGATGCTTCTGCGAGCA +
Preference number: 5 (lower is better)
Translates to: FGRCEDIPKHGHPHSDTSNRTPD*PMLLRA
Trigger: TGCTCGCAGAAGCATCGGCAAGTCAGGCGTCCTGTT...CGATGTATCAGAATGTGGATGGCCGTGTTTCGGAATGTCCTCACACCTACCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS-3UTR CAA 90 bp GAGAAGGCCTTGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCGGCGTCGACCAGCACTaGCAGTGTGATGGAAGCAGA +
Preference number: 5 (lower is better)
Translates to: EKALDADQCSNKVHYQLLGVDQH*QCDGSR
Trigger: TCTGCTTCCATCACACTGCAAGTGCTGGTCGACGCC...GAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCAAGGCCTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CAA 90 bp GTGGCTATGGGTGCACAATTTCAGGGGGTTCGTGAACTCCAGTTAAGACTTGCCATCTCTTCTGTGCAGTaGGGAGACTTGTCTGAACAC +
Preference number: 5 (lower is better)
Translates to: VAMGAQFQGVRELQLRLAISSVQ*GDLSEH
Trigger: GTGTTCAGACAAGTCTCCCAACTGCACAGAAGAGAT...GGCAAGTCTTAACTGGAGTTCACGAACCCCCTGAAATTGTGCACCCATAGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR CAA 90 bp GCCTGTTTTGGTAGGTGTGAGGACATTCCGAAACACGGCCATCCACATTCTGATAGCTGGGTCATCATCTaGAGTTCTGACATGAGTGCC +
Preference number: 5 (lower is better)
Translates to: ACFGRCEDIPKHGHPHSDSWVII*SSDMSA
Trigger: GGCACTCATGTCAGAACTCAAGATGATGACCCAGCT...ATCAGAATGTGGATGGCCGTGTTTCGGAATGTCCTCACACCTACCAAAACAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS GCA 90 bp TCTTATGTTGATTTCACCATGTGGCTGCTCCTGCTTCAGAACTTCTaGAGTGTCCCAGGACTTCTTGCTGCCTTTGTGTTACCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: SYVDFTMWLLLLQNF*SVPGLLAAFVLPLS
Trigger: GGACAAGGGTAACACAAAGGCAGCAAGAAGTCCTGGGACACTGCAGAAGTTCTGAAGCAGGAGCAGCCACATGGTGAAATCAACATAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469894.1
CDS-3UTR CAA 90 bp CTGGAAGGAATGTGTAGGTGGCTATGGGTGCACAATTTCAGGGGGTTCGTGAACCCACGTACATCTGATTaGTGGGTAGGCTTTAAACCT +
Preference number: 5 (lower is better)
Translates to: LEGMCRWLWVHNFRGFVNPRTSD*WVGFKP
Trigger: AGGTTTAAAGCCTACCCACAAATCAGATGTACGTGG...GTTCACGAACCCCCTGAAATTGTGCACCCATAGCCACCTACACATTCCTTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR CAA 90 bp CAATTTCAGGGGGTTCGTGAACTCCAGTTAAGACTTGCCCTAATTATACCATGTAACAGGACGCCTGACTaGCCGATGCTTCTGCGAGCA +
Preference number: 5 (lower is better)
Translates to: QFQGVRELQLRLALIIPCNRTPD*PMLLRA
Trigger: TGCTCGCAGAAGCATCGGCAAGTCAGGCGTCCTGTT...ACATGGTATAATTAGGGCAAGTCTTAACTGGAGTTCACGAACCCCCTGAAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR CAA 90 bp AGCCAGCCTGAGAAGGCCTTGGATGCAGATCAATGCTCCAATAAAGTTCATTATAGGATGGCCGTTTCCTaGAGTCAAAAGCCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: SQPEKALDADQCSNKVHYRMAVS*SQKPSR
Trigger: CCTGCTGGGCTTTTGACTCAAGGAAACGGCCATCCT...ATAATGAACTTTATTGGAGCATTGATCTGCATCCAAGGCCTTCTCAGGCTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CAA 90 bp GAGAAGGCCTTGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCAGCCTGAGAAGGCCTaGGATGCAGATCAATGCTCC +
Preference number: 5 (lower is better)
Translates to: EKALDADQCSNKVHYQLLQPEKA*DADQCS
Trigger: GGAGCATTGATCTGCATCCAAGGCCTTCTCAGGCTG...GAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCAAGGCCTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS TCA 90 bp CAAAGTAGTTGCCCTCCTCGAGTGCTTTGTTTTCTAATTCCCAGGTaGGCCCGAATCCATGGTTCACATGAACAGCTTTGCACCTTATCC +
Preference number: 5 (lower is better)
Translates to: QSSCPPRVLCFLIPR*ARIHGSHEQLCTLS
Trigger: GGATAAGGTGCAAAGCTGTTCATGTGAACCATGGATTCGGGCTCACCTGGGAATTAGAAAACAAAGCACTCGAGGAGGGCAACTACTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CAA 90 bp GGGATGAAGTCCTTAAAACTAAATTGTTCCTCTACGAATCTTCGACCTGAGCCTCAGCCTGAGAAGGCCTaGGATGCAGATCAATGCTCC +
Preference number: 5 (lower is better)
Translates to: GMKSLKLNCSSTNLRPEPQPEKA*DADQCS
Trigger: GGAGCATTGATCTGCATCCAAGGCCTTCTCAGGCTG...AGGCTCAGGTCGAAGATTCGTAGAGGAACAATTTAGTTTTAAGGACTTCATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS TCA 90 bp GGATCGTCTCACAAGATGTGCCAAGGGAATTGTATGCACAGCACTTaGCCAGGAACCCTTTTATGGCTTCACTCATGTTTAGAGTACTGC +
Preference number: 5 (lower is better)
Translates to: GSSHKMCQGNCMHST*PGTLLWLHSCLEYC
Trigger: GCAGTACTCTAAACATGAGTGAAGCCATAAAAGGGTTCCTGGTCAAGTGCTGTGCATACAATTCCCTTGGCACATCTTGTGAGACGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CAA 90 bp GTGGCTATGGGTGCACAATTTCAGGGGGTTCGTGAACTCCAGTTAAGACTTGCCGATCACAGGCAGATCTaGATTTGTAATAGTCCCAAA +
Preference number: 5 (lower is better)
Translates to: VAMGAQFQGVRELQLRLADHRQI*ICNSPK
Trigger: TTTGGGACTATTACAAATCAAGATCTGCCTGTGATC...GGCAAGTCTTAACTGGAGTTCACGAACCCCCTGAAATTGTGCACCCATAGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR CAA 90 bp AGCCAGCCTGAGAAGGCCTTGGATGCAGATCAATGCTCCAATAAAGTTCATTATGTGCAGTTGGGAGACTaGTCTGAACACTTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: SQPEKALDADQCSNKVHYVQLGD*SEHFFQ
Trigger: CTGGAAGAAGTGTTCAGACAAGTCTCCCAACTGCAC...ATAATGAACTTTATTGGAGCATTGATCTGCATCCAAGGCCTTCTCAGGCTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CAA 90 bp AGCCAGCCTGAGAAGGCCTTGGATGCAGATCAATGCTCCAATAAAGTTCATTATGATGTGCCAAGGGAATaGTATGCACAGCACTTGACC +
Preference number: 5 (lower is better)
Translates to: SQPEKALDADQCSNKVHYDVPRE*YAQHLT
Trigger: GGTCAAGTGCTGTGCATACAATTCCCTTGGCACATC...ATAATGAACTTTATTGGAGCATTGATCTGCATCCAAGGCCTTCTCAGGCTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CAA 90 bp TGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGAGCTGGGTCATCATCTaGAGTTCTGACATGAGTGCC +
Preference number: 5 (lower is better)
Translates to: WMQINAPIKFIISSSCLVSWVII*SSDMSA
Trigger: GGCACTCATGTCAGAACTCAAGATGATGACCCAGCT...CACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CAA 90 bp TTTGGTAGGTGTGAGGACATTCCGAAACACGGCCATCCACATTCTGATACATCGGATCGATCTCATTCTTaGGTTTCTGAACTCAGCCCA +
Preference number: 5 (lower is better)
Translates to: FGRCEDIPKHGHPHSDTSDRSHS*VSELSP
Trigger: TGGGCTGAGTTCAGAAACCAAAGAATGAGATCGATC...CGATGTATCAGAATGTGGATGGCCGTGTTTCGGAATGTCCTCACACCTACCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS-3UTR CAA 90 bp AGGTGGAGGGATGAAGTCCTTAAAACTAAATTGTTCCTCTACGAATCTTCGACCGTGCAGTTGGGAGACTaGTCTGAACACTTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: RWRDEVLKTKLFLYESSTVQLGD*SEHFFQ
Trigger: CTGGAAGAAGTGTTCAGACAAGTCTCCCAACTGCAC...GGTCGAAGATTCGTAGAGGAACAATTTAGTTTTAAGGACTTCATCCCTCCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS-3UTR CAA 90 bp TGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGATCTCTTCTGTGCAGTaGGGAGACTTGTCTGAACAC +
Preference number: 5 (lower is better)
Translates to: WMQINAPIKFIISSSCLVISSVQ*GDLSEH
Trigger: GTGTTCAGACAAGTCTCCCAACTGCACAGAAGAGAT...CACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CAA 90 bp TTTACAAGAATATACTGTACTTCAGGTACACAATTCACTCAAGCCAGCCTGAGAAGGATGGCCGTTTCCTaGAGTCAAAAGCCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: FTRIYCTSGTQFTQASLRRMAVS*SQKPSR
Trigger: CCTGCTGGGCTTTTGACTCAAGGAAACGGCCATCCT...TCTCAGGCTGGCTTGAGTGAATTGTGTACCTGAAGTACAGTATATTCTTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CAA 90 bp CAATTTCAGGGGGTTCGTGAACTCCAGTTAAGACTTGCCCTAATTATACCATGTGAAAGGTCGCCTGTTTaGGTAGGTGTGAGGACATTC +
Preference number: 5 (lower is better)
Translates to: QFQGVRELQLRLALIIPCERSPV*VGVRTF
Trigger: GAATGTCCTCACACCTACCAAAACAGGCGACCTTTC...ACATGGTATAATTAGGGCAAGTCTTAACTGGAGTTCACGAACCCCCTGAAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR CAA 90 bp ATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGACAGAAAGGTCGCCTGTTTaGGTAGGTGTGAGGACATTC +
Preference number: 5 (lower is better)
Translates to: MQINAPIKFIISSSCLVTERSPV*VGVRTF
Trigger: GAATGTCCTCACACCTACCAAAACAGGCGACCTTTC...TGTCACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS TCA 90 bp GGATATGCTGTATCCGTTATCAAGACCCTTTTGCTCACAAGGAAATaGTTTTCGAGAGAAGGTCCACGTACATCTGATTTGTGGGTAGGC +
Preference number: 5 (lower is better)
Translates to: GYAVSVIKTLLLTRK*FSREGPRTSDLWVG
Trigger: GCCTACCCACAAATCAGATGTACGTGGACCTTCTCTCGAAAATCATTTCCTTGTGAGCAAAAGGGTCTTGATAACGGATACAGCATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CAA 90 bp TGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGATCCGGTGTCGTTTCTaGCCACTGATGATACAAAAG +
Preference number: 5 (lower is better)
Translates to: WMQINAPIKFIISSSCLVIRCRF*PLMIQK
Trigger: CTTTTGTATCATCAGTGGCAAGAAACGACACCGGAT...CACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CAA 90 bp AATCAGTTTGTAGAAGTTAGCATCAACCGGAATGCCAGGGTAAGGATTCACACCATCCGGTGTCGTTTCTaGCCACTGATGATACAAAAG +
Preference number: 5 (lower is better)
Translates to: NQFVEVSINRNARVRIHTIRCRF*PLMIQK
Trigger: CTTTTGTATCATCAGTGGCAAGAAACGACACCGGAT...GGTGTGAATCCTTACCCTGGCATTCCGGTTGATGCTAACTTCTACAAACTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS-3UTR CAA 90 bp AGCCAGCCTGAGAAGGCCTTGGATGCAGATCAATGCTCCAATAAAGTTCATTATTTGTATGCACAGCACTaGACCAGGAACCCTTTTATG +
Preference number: 5 (lower is better)
Translates to: SQPEKALDADQCSNKVHYLYAQH*TRNPFM
Trigger: CATAAAAGGGTTCCTGGTCAAGTGCTGTGCATACAA...ATAATGAACTTTATTGGAGCATTGATCTGCATCCAAGGCCTTCTCAGGCTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CAA 90 bp CAATTTCAGGGGGTTCGTGAACTCCAGTTAAGACTTGCCCTAATTATACCATGTCAGGCATGCTGGAATTaGGATGTGATTGGAAAGTGG +
Preference number: 5 (lower is better)
Translates to: QFQGVRELQLRLALIIPCQACWN*DVIGKW
Trigger: CCACTTTCCAATCACATCCAAATTCCAGCATGCCTG...ACATGGTATAATTAGGGCAAGTCTTAACTGGAGTTCACGAACCCCCTGAAATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR CAA 90 bp AATATACTGTACTTCAGGTACACAATTCACTCAAGCCAGCCTGAGAAGGCCTTGGTATCTGAACTTCTCTaGAACCAGGCATGCTGGAAT +
Preference number: 5 (lower is better)
Translates to: NILYFRYTIHSSQPEKALVSELL*NQACWN
Trigger: ATTCCAGCATGCCTGGTTCAAGAGAAGTTCAGATAC...CAAGGCCTTCTCAGGCTGGCTTGAGTGAATTGTGTACCTGAAGTACAGTATATT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR CAA 90 bp ATTTACAAGAATATACTGTACTTCAGGTACACAATTCACTCAAGCCAGCCTGAGCCCTCCTCGAGTGCTTaGTTTTCTAATTCCCAGGTG +
Preference number: 5 (lower is better)
Translates to: IYKNILYFRYTIHSSQPEPSSSA*FSNSQV
Trigger: CACCTGGGAATTAGAAAACAAAGCACTCGAGGAGGG...CTCAGGCTGGCTTGAGTGAATTGTGTACCTGAAGTACAGTATATTCTTGTAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CAA 90 bp AATCAGTTTGTAGAAGTTAGCATCAACCGGAATGCCAGGGTAAGGATTCACACCATTGACTGGGATGCTTaGAAGAGGAACAAGTGTAGT +
Preference number: 5 (lower is better)
Translates to: NQFVEVSINRNARVRIHTIDWDA*KRNKCS
Trigger: ACTACACTTGTTCCTCTTCAAAGCATCCCAGTCAAT...GGTGTGAATCCTTACCCTGGCATTCCGGTTGATGCTAACTTCTACAAACTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS-3UTR CAA 90 bp GGGATGAAGTCCTTAAAACTAAATTGTTCCTCTACGAATCTTCGACCTGAGCCTCCACGTACATCTGATTaGTGGGTAGGCTTTAAACCT +
Preference number: 5 (lower is better)
Translates to: GMKSLKLNCSSTNLRPEPPRTSD*WVGFKP
Trigger: AGGTTTAAAGCCTACCCACAAATCAGATGTACGTGG...AGGCTCAGGTCGAAGATTCGTAGAGGAACAATTTAGTTTTAAGGACTTCATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS-3UTR CAA 90 bp AGCCAGCCTGAGAAGGCCTTGGATGCAGATCAATGCTCCAATAAAGTTCATTATTGCTTCTGCGAGCACTaGAGGTTTCCTTCTTATATT +
Preference number: 5 (lower is better)
Translates to: SQPEKALDADQCSNKVHYCFCEH*RFPSYI
Trigger: AATATAAGAAGGAAACCTCAAGTGCTCGCAGAAGCA...ATAATGAACTTTATTGGAGCATTGATCTGCATCCAAGGCCTTCTCAGGCTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CAA 90 bp ATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGACATTGTATGCACAGCACTaGACCAGGAACCCTTTTATG +
Preference number: 5 (lower is better)
Translates to: MQINAPIKFIISSSCLVTLYAQH*TRNPFM
Trigger: CATAAAAGGGTTCCTGGTCAAGTGCTGTGCATACAA...TGTCACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CAA 90 bp TGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGTTTTCTTTCAGCATTTaGACGGCAACCTGGATTGAG +
Preference number: 5 (lower is better)
Translates to: WMQINAPIKFIISSSCLVFSFSI*TATWIE
Trigger: CTCAATCCAGGTTGCCGTCAAAATGCTGAAAGAAAA...CACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CAA 90 bp AATCAGTTTGTAGAAGTTAGCATCAACCGGAATGCCAGGGTAAGGATTCACACCTTTTCTTTCAGCATTTaGACGGCAACCTGGATTGAG +
Preference number: 5 (lower is better)
Translates to: NQFVEVSINRNARVRIHTFSFSI*TATWIE
Trigger: CTCAATCCAGGTTGCCGTCAAAATGCTGAAAGAAAA...GGTGTGAATCCTTACCCTGGCATTCCGGTTGATGCTAACTTCTACAAACTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS-3UTR CAA 90 bp TGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGGATCACAGGCAGATCTaGATTTGTAATAGTCCCAAA +
Preference number: 5 (lower is better)
Translates to: WMQINAPIKFIISSSCLVDHRQI*ICNSPK
Trigger: TTTGGGACTATTACAAATCAAGATCTGCCTGTGATC...CACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CAA 90 bp GGTAGAACACCTATTCATTATAAACTTCCCCCAATACAACCCCTGTTGTTGCAGATTGACTGGGATGCTTaGAAGAGGAACAAGTGTAGT +
Preference number: 5 (lower is better)
Translates to: GRTPIHYKLPPIQPLLLQIDWDA*KRNKCS
Trigger: ACTACACTTGTTCCTCTTCAAAGCATCCCAGTCAAT...CTGCAACAACAGGGGTTGTATTGGGGGAAGTTTATAATGAATAGGTGTTCTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR CAA 90 bp TTGGATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTTGCTTCTGCGAGCACTaGAGGTTTCCTTCTTATATT +
Preference number: 5 (lower is better)
Translates to: LDADQCSNKVHYQLLLPCCFCEH*RFPSYI
Trigger: AATATAAGAAGGAAACCTCAAGTGCTCGCAGAAGCA...ACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CAA 90 bp AGCCAGCCTGAGAAGGCCTTGGATGCAGATCAATGCTCCAATAAAGTTCATTATGGAGACAAACACCAATaGTTGCATAGAATGAGATGT +
Preference number: 5 (lower is better)
Translates to: SQPEKALDADQCSNKVHYGDKHQ*LHRMRC
Trigger: ACATCTCATTCTATGCAACAATTGGTGTTTGTCTCC...ATAATGAACTTTATTGGAGCATTGATCTGCATCCAAGGCCTTCTCAGGCTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CAA 90 bp CAATTTCAGGGGGTTCGTGAACTCCAGTTAAGACTTGCCCTAATTATACCATGTCAAAAATCAAGTAAATaGGTCCTGACAGTGTGCACG +
Preference number: 5 (lower is better)
Translates to: QFQGVRELQLRLALIIPCQKSSK*VLTVCT
Trigger: CGTGCACACTGTCAGGACCAATTTACTTGATTTTTG...ACATGGTATAATTAGGGCAAGTCTTAACTGGAGTTCACGAACCCCCTGAAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR CAA 90 bp ATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGACACAAAAATCAAGTAAATaGGTCCTGACAGTGTGCACG +
Preference number: 5 (lower is better)
Translates to: MQINAPIKFIISSSCLVTQKSSK*VLTVCT
Trigger: CGTGCACACTGTCAGGACCAATTTACTTGATTTTTG...TGTCACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CAA 90 bp AGCCAGCCTGAGAAGGCCTTGGATGCAGATCAATGCTCCAATAAAGTTCATTATGAACATTTTGGTAAATaGGGCATCATCATTTTCTGC +
Preference number: 5 (lower is better)
Translates to: SQPEKALDADQCSNKVHYEHFGK*GIIIFC
Trigger: GCAGAAAATGATGATGCCCAATTTACCAAAATGTTC...ATAATGAACTTTATTGGAGCATTGATCTGCATCCAAGGCCTTCTCAGGCTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CAA 90 bp AATCAGTTTGTAGAAGTTAGCATCAACCGGAATGCCAGGGTAAGGATTCACACCGAACATTTTGGTAAATaGGGCATCATCATTTTCTGC +
Preference number: 5 (lower is better)
Translates to: NQFVEVSINRNARVRIHTEHFGK*GIIIFC
Trigger: GCAGAAAATGATGATGCCCAATTTACCAAAATGTTC...GGTGTGAATCCTTACCCTGGCATTCCGGTTGATGCTAACTTCTACAAACTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS-3UTR CAA 90 bp ATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGACAGGAGACAAACACCAATaGTTGCATAGAATGAGATGT +
Preference number: 5 (lower is better)
Translates to: MQINAPIKFIISSSCLVTGDKHQ*LHRMRC
Trigger: ACATCTCATTCTATGCAACAATTGGTGTTTGTCTCC...TGTCACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CAA 90 bp GGTAGAACACCTATTCATTATAAACTTCCCCCAATACAACCCCTGTTGTTGCAGCATTCCTTTGGCAACTaGATATGCAAAGCAAAGAAG +
Preference number: 5 (lower is better)
Translates to: GRTPIHYKLPPIQPLLLQHSFGN*ICKAKK
Trigger: CTTCTTTGCTTTGCATATCAAGTTGCCAAAGGAATG...CTGCAACAACAGGGGTTGTATTGGGGGAAGTTTATAATGAATAGGTGTTCTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS-3UTR CAA 90 bp ATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGACACATTCCTTTGGCAACTaGATATGCAAAGCAAAGAAG +
Preference number: 5 (lower is better)
Translates to: MQINAPIKFIISSSCLVTHSFGN*ICKAKK
Trigger: CTTCTTTGCTTTGCATATCAAGTTGCCAAAGGAATG...TGTCACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CAA 90 bp GATGCAGATCAATGCTCCAATAAAGTTCATTATCAGCTCCTCCTGCCTTGTGACGTCCTTAAAACTAAATaGTTCCTCTACGAATCTTCG +
Preference number: 5 (lower is better)
Translates to: DADQCSNKVHYQLLLPCDVLKTK*FLYESS
Trigger: CGAAGATTCGTAGAGGAACAATTTAGTTTTAAGGAC...GTCACAAGGCAGGAGGAGCTGATAATGAACTTTATTGGAGCATTGATCTGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CAA 90 bp AGCCAGCCTGAGAAGGCCTTGGATGCAGATCAATGCTCCAATAAAGTTCATTATGTCCTTAAAACTAAATaGTTCCTCTACGAATCTTCG +
Preference number: 5 (lower is better)
Translates to: SQPEKALDADQCSNKVHYVLKTK*FLYESS
Trigger: CGAAGATTCGTAGAGGAACAATTTAGTTTTAAGGAC...ATAATGAACTTTATTGGAGCATTGATCTGCATCCAAGGCCTTCTCAGGCTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CAA 90 bp AGGTGGAGGGATGAAGTCCTTAAAACTAAATTGTTCCTCTACGAATCTTCGACCGACAAACACCAATTGTaGCATAGAATGAGATGTTGT +
Preference number: 5 (lower is better)
Translates to: RWRDEVLKTKLFLYESSTDKHQL*HRMRCC
Trigger: ACAACATCTCATTCTATGCAACAATTGGTGTTTGTC...GGTCGAAGATTCGTAGAGGAACAATTTAGTTTTAAGGACTTCATCCCTCCACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380987.2
CDS TCA 90 bp TCATCATTTTCTGCATGGAATATATATTCTCCTGGCTGGTGCTTATaGTTGCAAAACTTGGATATGCTGTATCCGTTATCAAGACCCTTT +
Preference number: 5 (lower is better)
Translates to: SSFSAWNIYSPGWCL*LQNLDMLYPLSRPF
Trigger: AAAGGGTCTTGATAACGGATACAGCATATCCAAGTTTTGCAATCATAAGCACCAGCCAGGAGAATATATATTCCATGCAGAAAATGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS-3UTR CAA 90 bp TTTACAAGAATATACTGTACTTCAGGTACACAATTCACTCAAGCCAGCCTGAGAGACAAACACCAATTGTaGCATAGAATGAGATGTTGT +
Preference number: 5 (lower is better)
Translates to: FTRIYCTSGTQFTQASLRDKHQL*HRMRCC
Trigger: ACAACATCTCATTCTATGCAACAATTGGTGTTTGTC...TCTCAGGCTGGCTTGAGTGAATTGTGTACCTGAAGTACAGTATATTCTTGTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS TCA 90 bp ATTGCTTTTTGTACTTGTGACAAATTAGCAGGGTTAAAACGACAATaGAGAGGAGACAAACACCAATTGTTGCATAGAATGAGATGTTGT +
Preference number: 5 (lower is better)
Translates to: IAFCTCDKLAGLKRQ*RGDKHQLLHRMRCC
Trigger: ACAACATCTCATTCTATGCAACAATTGGTGTTTGTCTCCTCTTCATTGTCGTTTTAACCCTGCTAATTTGTCACAAGTACAAAAAGCAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS GCA 90 bp TATATTCAGCGTGAACATTTTGGTAAATTGGGCATCATCATTTTCTaGATGGAATATATATTCTCCTGGCTGGTGCTTATGATTGCAAAA +
Preference number: 5 (lower is better)
Translates to: YIQREHFGKLGIIIF*MEYIFSWLVLMIAK
Trigger: TTTTGCAATCATAAGCACCAGCCAGGAGAATATATATTCCATGCAGAAAATGATGATGCCCAATTTACCAAAATGTTCACGCTGAATATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS CCA 72 bp TCCACAGCGGCAGCTTCGTACACTGTCCCTGAGCTCTaGGGTCTCAACGCACACCCGAGGTCTTCCGGGGAT +
Preference number: 6 (lower is better)
Translates to: STAAASYTVPEL*GLNAHPRSSGD
Trigger: ATCCCCGGAAGACCTCGGGTGTGCGTTGAGACCCCAGAGCTCAGGGACAGTGTACGAAGCTGCCGCTGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS TCA 72 bp ATCCACTTCCACAGCGGCAGCTTCGTACACTGTCCCTaGGCTCTGGGGTCTCAACGCACACCCGAGGTCTTC +
Preference number: 6 (lower is better)
Translates to: IHFHSGSFVHCP*ALGSQRTPEVF
Trigger: GAAGACCTCGGGTGTGCGTTGAGACCCCAGAGCTCAGGGACAGTGTACGAAGCTGCCGCTGTGGAAGTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS CAA 90 bp AAAGACCCAGAGACAGGAAATGTTCCCTGGGGCGTCGACCAGCACTaGCAGTGTGATGGAAGCAGATACATCCACTTCCACAGCGGCAGC +
Preference number: 6 (lower is better)
Translates to: KDPETGNVPWGVDQH*QCDGSRYIHFHSGS
Trigger: GCTGCCGCTGTGGAAGTGGATGTATCTGCTTCCATCACACTGCAAGTGCTGGTCGACGCCCCAGGGAACATTTCCTGTCTCTGGGTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS TCA 72 bp AAATGTTCCCTGGGGCGTCGACCAGCACTTGCAGTGTaGTGGAAGCAGATACATCCACTTCCACAGCGGCAG +
Preference number: 6 (lower is better)
Translates to: KCSLGRRPALAV*WKQIHPLPQRQ
Trigger: CTGCCGCTGTGGAAGTGGATGTATCTGCTTCCATCACACTGCAAGTGCTGGTCGACGCCCCAGGGAACATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS CCA 72 bp GCTGTGCTTAAAGACCCAGAGACAGGAAATGTTCCCTaGGGCGTCGACCAGCACTTGCAGTGTGATGGAAGC +
Preference number: 6 (lower is better)
Translates to: AVLKDPETGNVP*GVDQHLQCDGS
Trigger: GCTTCCATCACACTGCAAGTGCTGGTCGACGCCCCAGGGAACATTTCCTGTCTCTGGGTCTTTAAGCACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS CAA 72 bp GAGACAGGAAATGTTCCCTGGGGCGTCGACCAGCACTaGCAGTGTGATGGAAGCAGATACATCCACTTCCAC +
Preference number: 6 (lower is better)
Translates to: ETGNVPWGVDQH*QCDGSRYIHFH
Trigger: GTGGAAGTGGATGTATCTGCTTCCATCACACTGCAAGTGCTGGTCGACGCCCCAGGGAACATTTCCTGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS CAA 72 bp GTAATGGGTATCCATCCGAGAAACAGGACGCCTGACTaGCCGATGCTTCTGCGAGCACTTGAGGTTTCCTTC +
Preference number: 6 (lower is better)
Translates to: VMGIHPRNRTPD*PMLLRALEVSF
Trigger: GAAGGAAACCTCAAGTGCTCGCAGAAGCATCGGCAAGTCAGGCGTCCTGTTTCTCGGATGGATACCCATTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS CAA 72 bp AGTGTCCCAGGACTTCTTGCTGCCTTTGTGTTACCCTaGTCCTTGTTTTTCCCAGGCATCCTCTGTGGTGGG +
Preference number: 6 (lower is better)
Translates to: SVPGLLAAFVLP*SLFFPGILCGG
Trigger: CCCACCACAGAGGATGCCTGGGAAAAACAAGGACAAGGGTAACACAAAGGCAGCAAGAAGTCCTGGGACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469894.1
CDS TCA 72 bp TGCCCTCCTCGAGTGCTTTGTTTTCTAATTCCCAGGTaGGCCCGAATCCATGGTTCACATGAACAGCTTTGC +
Preference number: 6 (lower is better)
Translates to: CPPRVLCFLIPR*ARIHGSHEQLC
Trigger: GCAAAGCTGTTCATGTGAACCATGGATTCGGGCTCACCTGGGAATTAGAAAACAAAGCACTCGAGGAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS GCA 72 bp ATCCGAGAAACAGGACGCCTGACTTGCCGATGCTTCTaGGAGCACTTGAGGTTTCCTTCTTATATTCAGCGT +
Preference number: 6 (lower is better)
Translates to: IRETGRLTCRCF*EHLRFPSYIQR
Trigger: ACGCTGAATATAAGAAGGAAACCTCAAGTGCTCGCAGAAGCATCGGCAAGTCAGGCGTCCTGTTTCTCGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS GCA 72 bp GATTTCACCATGTGGCTGCTCCTGCTTCAGAACTTCTaGAGTGTCCCAGGACTTCTTGCTGCCTTTGTGTTA +
Preference number: 6 (lower is better)
Translates to: DFTMWLLLLQNF*SVPGLLAAFVL
Trigger: TAACACAAAGGCAGCAAGAAGTCCTGGGACACTGCAGAAGTTCTGAAGCAGGAGCAGCCACATGGTGAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469894.1
CDS GCA 72 bp GTATCCATCCGAGAAACAGGACGCCTGACTTGCCGATaGTTCTGCGAGCACTTGAGGTTTCCTTCTTATATT +
Preference number: 6 (lower is better)
Translates to: VSIRETGRLTCR*FCEHLRFPSYI
Trigger: AATATAAGAAGGAAACCTCAAGTGCTCGCAGAAGCATCGGCAAGTCAGGCGTCCTGTTTCTCGGATGGATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS CAA 90 bp CCTGGAGAGTTTAAAAGGATCGTCTCACAAGATGTGCCAAGGGAATaGTATGCACAGCACTTGACCAGGAACCCTTTTATGGCTTCACTC +
Preference number: 6 (lower is better)
Translates to: PGEFKRIVSQDVPRE*YAQHLTRNPFMASL
Trigger: GAGTGAAGCCATAAAAGGGTTCCTGGTCAAGTGCTGTGCATACAATTCCCTTGGCACATCTTGTGAGACGATCCTTTTAAACTCTCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS GCA 72 bp AAGGATCGTCTCACAAGATGTGCCAAGGGAATTGTATaGACAGCACTTGACCAGGAACCCTTTTATGGCTTC +
Preference number: 6 (lower is better)
Translates to: KDRLTRCAKGIV*TALDQEPFYGF
Trigger: GAAGCCATAAAAGGGTTCCTGGTCAAGTGCTGTGCATACAATTCCCTTGGCACATCTTGTGAGACGATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS CAA 90 bp AGGATCGTCTCACAAGATGTGCCAAGGGAATTGTATGCACAGCACTaGACCAGGAACCCTTTTATGGCTTCACTCATGTTTAGAGTACTG +
Preference number: 6 (lower is better)
Translates to: RIVSQDVPRELYAQH*TRNPFMASLMFRVL
Trigger: CAGTACTCTAAACATGAGTGAAGCCATAAAAGGGTTCCTGGTCAAGTGCTGTGCATACAATTCCCTTGGCACATCTTGTGAGACGATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS CAA 72 bp AGATTTGATCCGAGTCCGGGTGTATCTGAACTTCTCTaGAACCAGGCATGCTGGAATTTGGATGTGATTGGA +
Preference number: 6 (lower is better)
Translates to: RFDPSPGVSELL*NQACWNLDVIG
Trigger: TCCAATCACATCCAAATTCCAGCATGCCTGGTTCAAGAGAAGTTCAGATACACCCGGACTCGGATCAAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241453.12
CDS TCA 72 bp CACAAGATGTGCCAAGGGAATTGTATGCACAGCACTTaGCCAGGAACCCTTTTATGGCTTCACTCATGTTTA +
Preference number: 6 (lower is better)
Translates to: HKMCQGNCMHST*PGTLLWLHSCL
Trigger: TAAACATGAGTGAAGCCATAAAAGGGTTCCTGGTCAAGTGCTGTGCATACAATTCCCTTGGCACATCTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS TCA 72 bp CACCAATTGTTGCATAGAATGAGATGTTGTCTTGGATaGAAGGGAAGGGGCCTGGAGAGTTTAAAAGGATCG +
Preference number: 6 (lower is better)
Translates to: HQLLHRMRCCLG*KGRGLESLKGS
Trigger: CGATCCTTTTAAACTCTCCAGGCCCCTTCCCTTTCATCCAAGACAACATCTCATTCTATGCAACAATTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS CAA 72 bp TCACAAGATGTGCCAAGGGAATTGTATGCACAGCACTaGACCAGGAACCCTTTTATGGCTTCACTCATGTTT +
Preference number: 6 (lower is better)
Translates to: SQDVPRELYAQH*TRNPFMASLMF
Trigger: AAACATGAGTGAAGCCATAAAAGGGTTCCTGGTCAAGTGCTGTGCATACAATTCCCTTGGCACATCTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS GCA 72 bp TACATATTTAATCTTATGTTGATTTCACCATGTGGCTaGTCCTGCTTCAGAACTTCTGCAGTGTCCCAGGAC +
Preference number: 6 (lower is better)
Translates to: YIFNLMLISPCG*SCFRTSAVSQD
Trigger: GTCCTGGGACACTGCAGAAGTTCTGAAGCAGGAGCAGCCACATGGTGAAATCAACATAAGATTAAATATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469894.1
CDS CAA 72 bp TTTAAAAGGATCGTCTCACAAGATGTGCCAAGGGAATaGTATGCACAGCACTTGACCAGGAACCCTTTTATG +
Preference number: 6 (lower is better)
Translates to: FKRIVSQDVPRE*YAQHLTRNPFM
Trigger: CATAAAAGGGTTCCTGGTCAAGTGCTGTGCATACAATTCCCTTGGCACATCTTGTGAGACGATCCTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS TCA 72 bp GTATCCGTTATCAAGACCCTTTTGCTCACAAGGAAATaGTTTTCGAGAGAAGGTCCACGTACATCTGATTTG +
Preference number: 6 (lower is better)
Translates to: VSVIKTLLLTRK*FSREGPRTSDL
Trigger: CAAATCAGATGTACGTGGACCTTCTCTCGAAAATCATTTCCTTGTGAGCAAAAGGGTCTTGATAACGGATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS CAA 72 bp TTGAAGAGGAACAAGTGTAGTATCCGGTGTCGTTTCTaGCCACTGATGATACAAAAGCAAACAGAATCCGTA +
Preference number: 6 (lower is better)
Translates to: LKRNKCSIRCRF*PLMIQKQTESV
Trigger: TACGGATTCTGTTTGCTTTTGTATCATCAGTGGCAAGAAACGACACCGGATACTACACTTGTTCCTCTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS TCA 72 bp AAAAGCAAACAGAATCCGTATCATAGTTCTGTTTGTTaGATAGGTACTCATCTCAAAGTAGTTGCCCTCCTC +
Preference number: 6 (lower is better)
Translates to: KSKQNPYHSSVC*IGTHLKVVALL
Trigger: GAGGAGGGCAACTACTTTGAGATGAGTACCTATTCAACAAACAGAACTATGATACGGATTCTGTTTGCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS TCA 72 bp TCTGCATGGAATATATATTCTCCTGGCTGGTGCTTATaGTTGCAAAACTTGGATATGCTGTATCCGTTATCA +
Preference number: 6 (lower is better)
Translates to: SAWNIYSPGWCL*LQNLDMLYPLS
Trigger: TGATAACGGATACAGCATATCCAAGTTTTGCAATCATAAGCACCAGCCAGGAGAATATATATTCCATGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS GCA 72 bp CATGGAATATATATTCTCCTGGCTGGTGCTTATGATTaGAAAACTTGGATATGCTGTATCCGTTATCAAGAC +
Preference number: 6 (lower is better)
Translates to: HGIYILLAGAYD*KTWICCIRYQD
Trigger: GTCTTGATAACGGATACAGCATATCCAAGTTTTGCAATCATAAGCACCAGCCAGGAGAATATATATTCCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2
CDS TCA 72 bp TGTACTTGTGACAAATTAGCAGGGTTAAAACGACAATaGAGAGGAGACAAACACCAATTGTTGCATAGAATG +
Preference number: 6 (lower is better)
Translates to: CTCDKLAGLKRQ*RGDKHQLLHRM
Trigger: CATTCTATGCAACAATTGGTGTTTGTCTCCTCTTCATTGTCGTTTTAACCCTGCTAATTTGTCACAAGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241453.12
ENST00000380987.2