RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FLRT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000185070

Ensembl transcript IDs: ENST00000330753.6, ENST00000553627.1, ENST00000554746.1, ENST00000555398.1, ENST00000556335.1, ENST00000557419.5, ENST00000682132.1, ENST00000683129.1, ENST00000684303.1, ENST00000684438.1

Found 1153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACTGAGGCAGGAGAATGGTGTGAACTCGGAAGGCGGAGCTTGCAGTaGGTCGAGATCACGCCGCTGCACTCTGGCCTGGGGGACAGAGCG +
Preference number: 1 (lower is better)
Translates to: TEAGEWCELGRRSLQ*VEITPLHSGLGDRA
Trigger: CGCTCTGTCCCCCAGGCCAGAGTGCAGCGGCGTGATCTCGACTCACTGCAAGCTCCGCCTTCCGAGTTCACACCATTCTCCTGCCTCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR GCA 90 bp GGGAGACTGAGGCAGGAGAATGGTGTGAACTCGGAAGGCGGAGCTTaGAGTGAGTCGAGATCACGCCGCTGCACTCTGGCCTGGGGGACA +
Preference number: 1 (lower is better)
Translates to: GRLRQENGVNSEGGA*SESRSRRCTLAWGT
Trigger: TGTCCCCCAGGCCAGAGTGCAGCGGCGTGATCTCGACTCACTGCAAGCTCCGCCTTCCGAGTTCACACCATTCTCCTGCCTCAGTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CCA 90 bp CCATCTGGCCATAAGCAACTGACAGAGTGGCTCTTCCCCTGTAGCTaGGCACCCACCAGGGCCTGGGCATGGCTCTTAACACTGGATGAG +
Preference number: 1 (lower is better)
Translates to: PSGHKQLTEWLFPCS*APTRAWAWLLTLDE
Trigger: CTCATCCAGTGTTAAGAGCCATGCCCAGGCCCTGGTGGGTGCCCAGCTACAGGGGAAGAGCCACTCTGTCAGTTGCTTATGGCCAGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR GCA 90 bp AATAGGCAGGGGATACATTCCTCGTATCTGCCTGCGATTGTCCCATaGAGTGGGCTGCTAATGCATCTGACGGTGTTTGAGGGTGGCCCA +
Preference number: 1 (lower is better)
Translates to: NRQGIHSSYLPAIVP*SGLLMHLTVFEGGP
Trigger: TGGGCCACCCTCAAACACCGTCAGATGCATTAGCAGCCCACTGCATGGGACAATCGCAGGCAGATACGAGGAATGTATCCCCTGCCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR GCA 90 bp AGAGCACTTCCAAGAATGCCAACCACACAGGTAAACCTTGCTCTCTaGGGTGGCGTCTGTCCATCGCAATGGCCCGTGCTCCAAACTCTT +
Preference number: 1 (lower is better)
Translates to: RALPRMPTTQVNLAL*GGVCPSQWPVLQTL
Trigger: AAGAGTTTGGAGCACGGGCCATTGCGATGGACAGACGCCACCGCAGAGAGCAAGGTTTACCTGTGTGGTTGGCATTCTTGGAAGTGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 90 bp CTACATCTCCAGTCTCCGTGTGGGCTCTCTCCAAGGTGGCTTTGGTaGAGGAGACAGTTCGCTTGGACCAGGGTTTCTTTCATGTGCTTC +
Preference number: 1 (lower is better)
Translates to: LHLQSPCGLSPRWLW*RRQFAWTRVSFMCF
Trigger: GAAGCACATGAAAGAAACCCTGGTCCAAGCGAACTGTCTCCTTCACCAAAGCCACCTTGGAGAGAGCCCACACGGAGACTGGAGATGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CCA 90 bp ACTTCCAAGAATGCCAACCACACAGGTAAACCTTGCTCTCTGCGGTaGCGTCTGTCCATCGCAATGGCCCGTGCTCCAAACTCTTCCATT +
Preference number: 1 (lower is better)
Translates to: TSKNANHTGKPCSLR*RLSIAMARAPNSSI
Trigger: AATGGAAGAGTTTGGAGCACGGGCCATTGCGATGGACAGACGCCACCGCAGAGAGCAAGGTTTACCTGTGTGGTTGGCATTCTTGGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 90 bp TTCAAAAGCTGCGATGGCCTCTGCAGCCAAGGTCCGGAGATCAAGTaGAGCATCCATTCCCTGTGGACTGCAATATTGCCTCGTGTTCTG +
Preference number: 1 (lower is better)
Translates to: FKSCDGLCSQGPEIK*SIHSLWTAILPRVL
Trigger: CAGAACACGAGGCAATATTGCAGTCCACAGGGAATGGATGCTTCACTTGATCTCCGGACCTTGGCTGCAGAGGCCATCGCAGCTTTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CCA 90 bp ACACAGGTAAACCTTGCTCTCTGCGGTGGCGTCTGTCCATCGCAATaGCCCGTGCTCCAAACTCTTCCATTTCTCCTTTCTCTATCCACA +
Preference number: 1 (lower is better)
Translates to: TQVNLALCGGVCPSQ*PVLQTLPFLLSLST
Trigger: TGTGGATAGAGAAAGGAGAAATGGAAGAGTTTGGAGCACGGGCCATTGCGATGGACAGACGCCACCGCAGAGAGCAAGGTTTACCTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CCA 90 bp CTGGAGAAAAAGACAGAACCATGGGAAAGCACTCTGTCTTCAGCCTaGGCGAAAGGCAAGAGGCTAACAGCAAGGATCTCTGCCAATAGA +
Preference number: 1 (lower is better)
Translates to: LEKKTEPWESTLSSA*AKGKRLTARISANR
Trigger: TCTATTGGCAGAGATCCTTGCTGTTAGCCTCTTGCCTTTCGCCCAGGCTGAAGACAGAGTGCTTTCCCATGGTTCTGTCTTTTTCTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 90 bp GGCTTACTTGGGAGGGTTTTTGCAGCTGACACCTGTGGAAGGCTATaGAGAACCAGGACTGGTAGAGGGAGAAGTAAAGCCATGATGAAA +
Preference number: 1 (lower is better)
Translates to: GLLGRVFAADTCGRL*RTRTGRGRSKAMMK
Trigger: TTTCATCATGGCTTTACTTCTCCCTCTACCAGTCCTGGTTCTTCATAGCCTTCCACAGGTGTCAGCTGCAAAAACCCTCCCAAGTAAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR GCA 90 bp ATCCATTCCCTGTGGACTGCAATATTGCCTCGTGTTCTGAATGGATaGTTCAATCACAGCATGAAGATGTTGTCCTCCCTGGTGGGGAAG +
Preference number: 1 (lower is better)
Translates to: IHSLWTAILPRVLNG*FNHSMKMLSSLVGK
Trigger: CTTCCCCACCAGGGAGGACAACATCTTCATGCTGTGATTGAAGCATCCATTCAGAACACGAGGCAATATTGCAGTCCACAGGGAATGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR GCA 90 bp CAGCCAAGGTCCGGAGATCAAGTGAAGCATCCATTCCCTGTGGACTaGAATATTGCCTCGTGTTCTGAATGGATGCTTCAATCACAGCAT +
Preference number: 1 (lower is better)
Translates to: QPRSGDQVKHPFPVD*NIASCSEWMLQSQH
Trigger: ATGCTGTGATTGAAGCATCCATTCAGAACACGAGGCAATATTGCAGTCCACAGGGAATGGATGCTTCACTTGATCTCCGGACCTTGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CCA 90 bp AAGCATCCATTCCCTGTGGACTGCAATATTGCCTCGTGTTCTGAATaGATGCTTCAATCACAGCATGAAGATGTTGTCCTCCCTGGTGGG +
Preference number: 1 (lower is better)
Translates to: KHPFPVDCNIASCSE*MLQSQHEDVVLPGG
Trigger: CCCACCAGGGAGGACAACATCTTCATGCTGTGATTGAAGCATCCATTCAGAACACGAGGCAATATTGCAGTCCACAGGGAATGGATGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CCA 90 bp AGACAAGTGATAGATGAGCCTACCCAAGGAATATGGCAGGAATGGTaGGTCCACCCTCAAAGCTACATCACTCCTGATCACATGAGAAGG +
Preference number: 1 (lower is better)
Translates to: RQVIDEPTQGIWQEW*VHPQSYITPDHMRR
Trigger: CCTTCTCATGTGATCAGGAGTGATGTAGCTTTGAGGGTGGACCCACCATTCCTGCCATATTCCTTGGGTAGGCTCATCTATCACTTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR GCA 90 bp GGACGTACTACTGTAGTCCTTATCCAGAAATCAGGTCTCTCCTGCTaGTATTCACATCACCTGACTCCACTGAAGATAGTGACCAGACAC +
Preference number: 1 (lower is better)
Translates to: GRTTVVLIQKSGLSC*YSHHLTPLKIVTRH
Trigger: GTGTCTGGTCACTATCTTCAGTGGAGTCAGGTGATGTGAATAGCAGCAGGAGAGACCTGATTTCTGGATAAGGACTACAGTAGTACGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR GCA 90 bp CCCATCAAGAACAGGCCCAGTTTCTTTGGAAAGGATTTCCAGACATaGCGGACTAAACTCCCAGAAATTTGCAAAAGGTGGCATGTCCCT +
Preference number: 1 (lower is better)
Translates to: PIKNRPSFFGKDFQT*RTKLPEICKRWHVP
Trigger: AGGGACATGCCACCTTTTGCAAATTTCTGGGAGTTTAGTCCGGCATGTCTGGAAATCCTTTCCAAAGAAACTGGGCCTGTTCTTGATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CCA 90 bp GCTATAGCTTTGGTCAGCTGTGCATGTATGTGTCACTGTGTCTCTTaGACAGAGTATGTTGGTCCCAGGCAACTTCCATATCTTAAGCCC +
Preference number: 1 (lower is better)
Translates to: AIALVSCACMCHCVS*TEYVGPRQLPYLKP
Trigger: GGGCTTAAGATATGGAAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGCACAGCTGACCAAAGCTATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR GCA 90 bp CTGAGATATTCATGGAAGAGCAGACTGGGGGAAATTTGCTGTCATTaGAGGAGCATGGAAAATCACTTAGTTCTACCGGGAGTGACAGAC +
Preference number: 1 (lower is better)
Translates to: LRYSWKSRLGEICCH*RSMENHLVLPGVTD
Trigger: GTCTGTCACTCCCGGTAGAACTAAGTGATTTTCCATGCTCCTGCAATGACAGCAAATTTCCCCCAGTCTGCTCTTCCATGAATATCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CCA 90 bp TTAAGACAAGTGATAGATGAGCCTACCCAAGGAATATGGCAGGAATaGTGGGTCCACCCTCAAAGCTACATCACTCCTGATCACATGAGA +
Preference number: 1 (lower is better)
Translates to: LRQVIDEPTQGIWQE*WVHPQSYITPDHMR
Trigger: TCTCATGTGATCAGGAGTGATGTAGCTTTGAGGGTGGACCCACCATTCCTGCCATATTCCTTGGGTAGGCTCATCTATCACTTGTCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR GCA 90 bp AGTTGTTTACAACTCAAAAAGAGGAGCATCACCAGACACCAGATCTaGAGGCAACTTGATCTTGGGCTTCACAGCCTCAAGAATTGGAAG +
Preference number: 1 (lower is better)
Translates to: SCLQLKKRSITRHQI*RQLDLGLHSLKNWK
Trigger: CTTCCAATTCTTGAGGCTGTGAAGCCCAAGATCAAGTTGCCTGCAGATCTGGTGTCTGGTGATGCTCCTCTTTTTGAGTTGTAAACAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CCA 90 bp AATCTTCCTTTAAGACAAGTGATAGATGAGCCTACCCAAGGAATATaGCAGGAATGGTGGGTCCACCCTCAAAGCTACATCACTCCTGAT +
Preference number: 1 (lower is better)
Translates to: NLPLRQVIDEPTQGI*QEWWVHPQSYITPD
Trigger: ATCAGGAGTGATGTAGCTTTGAGGGTGGACCCACCATTCCTGCCATATTCCTTGGGTAGGCTCATCTATCACTTGTCTTAAAGGAAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CCA 90 bp AAGACTTCCTACCCCAATATTGATCAGTCATCAGGAAGTGTTGCCTaGAGAAAAAGACAGAACCATGGGAAAGCACTCTGTCTTCAGCCT +
Preference number: 1 (lower is better)
Translates to: KTSYPNIDQSSGSVA*RKRQNHGKALCLQP
Trigger: AGGCTGAAGACAGAGTGCTTTCCCATGGTTCTGTCTTTTTCTCCAGGCAACACTTCCTGATGACTGATCAATATTGGGGTAGGAAGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 90 bp TTAGACATCACAGATTCCATCACGTGCTTTCTATCCTGGTGCAGGTaGGGCTGTAACAAATGGGAGACGGATTTTAATCTTAGCAGTCTT +
Preference number: 1 (lower is better)
Translates to: LDITDSITCFLSWCR*GCNKWETDFNLSSL
Trigger: AAGACTGCTAAGATTAAAATCCGTCTCCCATTTGTTACAGCCTCACCTGCACCAGGATAGAAAGCACGTGATGGAATCTGTGATGTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR GCA 90 bp GATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATACTACTTaGCAAATAACTGTCCTGAAACCAATTAAATCATGCAGTCAAGGA +
Preference number: 1 (lower is better)
Translates to: DWQQTTGMPVPIDTT*QITVLKPIKSCSQG
Trigger: TCCTTGACTGCATGATTTAATTGGTTTCAGGACAGTTATTTGGCAAGTAGTATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR GCA 90 bp ATAAAGTATTCAGGTTGGCCATTTCCAGATTTCCTTTGCTTTATCTaGAGAAGGAACCACCACAAGCTCACAGCAGAATCTACACTAGTC +
Preference number: 1 (lower is better)
Translates to: IKYSGWPFPDFLCFI*RRNHHKLTAESTLV
Trigger: GACTAGTGTAGATTCTGCTGTGAGCTTGTGGTGGTTCCTTCTGCAGATAAAGCAAAGGAAATCTGGAAATGGCCAACCTGAATACTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 90 bp ATTGGCAGGTCAGTGGTTGAAGCAGGATTCCAAAGTAAGTCAGCTTaGTTTCAAACTGATTTCTTAATAACTACCACTCTCCACTCCCTT +
Preference number: 1 (lower is better)
Translates to: IGRSVVEAGFQSKSA*FQTDFLITTTLHSL
Trigger: AAGGGAGTGGAGAGTGGTAGTTATTAAGAAATCAGTTTGAAATCAAGCTGACTTACTTTGGAATCCTGCTTCAACCACTGACCTGCCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR GCA 90 bp TACACTAGTCCTATGAGCGACACACACTTGGCAATGCCTTCACCTTaGCTTAAACATTATAAATCTTACATTCCAGGGACACCTTTACAA +
Preference number: 1 (lower is better)
Translates to: YTSPMSDTHLAMPSP*LKHYKSYIPGTPLQ
Trigger: TTGTAAAGGTGTCCCTGGAATGTAAGATTTATAATGTTTAAGGCAAGGTGAAGGCATTGCCAAGTGTGTGTCGCTCATAGGACTAGTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CCA 90 bp TGGTTGATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTaGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAA +
Preference number: 1 (lower is better)
Translates to: WLMCILRKNHSFFLP*HWVLIVQPCTVLQQ
Trigger: TTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACATCAACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
3UTR CCA 90 bp TGCTTCAGAACCACAGAGCTCTACGCTATTAATCTCCTACGAGATTaGCAAAGTTTTACAAACTGCATGACCATCTGCCTGAAACATTTT +
Preference number: 1 (lower is better)
Translates to: CFRTTELYAINLLRD*QSFTNCMTICLKHF
Trigger: AAAATGTTTCAGGCAGATGGTCATGCAGTTTGTAAAACTTTGCCAATCTCGTAGGAGATTAATAGCGTAGAGCTCTGTGGTTCTGAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 90 bp TTCTTATTCTGCACCAGAACTTACCAGGCCTCGGTAAATATTTGCTaGATGAAATCAAAACTAAACCAACAAAGGCCCATCCTATCCCAA +
Preference number: 1 (lower is better)
Translates to: FLFCTRTYQASVNIC*MKSKLNQQRPILSQ
Trigger: TTGGGATAGGATGGGCCTTTGTTGGTTTAGTTTTGATTTCATTCAGCAAATATTTACCGAGGCCTGGTAAGTTCTGGTGCAGAATAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 90 bp CTACAATATGCCAAGGAATTTCTTCCATCTCAACTTCAATTAGTGTaGCTCACCATTGAGTCCAGATTTCAGTCAACCAATCCAGAAAGC +
Preference number: 1 (lower is better)
Translates to: LQYAKEFLPSQLQLV*LTIESRFQSTNPES
Trigger: GCTTTCTGGATTGGTTGACTGAAATCTGGACTCAATGGTGAGTCACACTAATTGAAGTTGAGATGGAAGAAATTCCTTGGCATATTGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 90 bp TGTTCTCATGTGGTTAAAGGCAACTTCCACTCACAGAATGAACTATaGCATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTCTATA +
Preference number: 1 (lower is better)
Translates to: CSHVVKGNFHSQNEL*HSPSRTNRKVHSSI
Trigger: TATAGAACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTGAGTGGAAGTTGCCTTTAACCACATGAGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR GCA 90 bp TGCATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTaGACACACGAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGAT +
Preference number: 1 (lower is better)
Translates to: CICVTFIKCNLRVFM*THECVLKSLIVRLD
Trigger: ATCAAGGCGGACAATTAGACTCTTGAGAACACACTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
3UTR GCA 90 bp CATCTACACTTTCATCTCTATCTAAAAGAGGAGAGTCCTCATCAATaGATTAATAAATGCCTTAAAGAAACACCCTCTGGCCAGGTGCAA +
Preference number: 1 (lower is better)
Translates to: HLHFHLYLKEESPHQ*INKCLKETPSGQVQ
Trigger: TTGCACCTGGCCAGAGGGTGTTTCTTTAAGGCATTTATTAATGCATTGATGAGGACTCTCCTCTTTTAGATAGAGATGAAAGTGTAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR GCA 90 bp CTAACTGATTTTTCCACAGTCCATTATAGTATTTTAAAGGCTGGTTaGTTCAGGCAACTTGTGGTGAATGATAACAGTGACTCTTACCGG +
Preference number: 1 (lower is better)
Translates to: LTDFSTVHYSILKAG*FRQLVVNDNSDSYR
Trigger: CCGGTAAGAGTCACTGTTATCATTCACCACAAGTTGCCTGAAGCAACCAGCCTTTAAAATACTATAATGGACTGTGGAAAAATCAGTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 90 bp TTTGATCATGACTATGCCTCTTCCTTTTCAATGTCTTCTGTACAGTaGCATTTACCAAGCTCTGAATGGGATCAGATTCTATCTGAGTCA +
Preference number: 1 (lower is better)
Translates to: FDHDYASSFSMSSVQ*HLPSSEWDQILSES
Trigger: TGACTCAGATAGAATCTGATCCCATTCAGAGCTTGGTAAATGTCACTGTACAGAAGACATTGAAAAGGAAGAGGCATAGTCATGATCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 90 bp CTCTGGGAAATGCACATGTGGGCTTACAGCTTCTTTAGTACAAGATaGCTCCTAGAAGGATGTGAAAATAGATGTCAAATACTAAATCCA +
Preference number: 1 (lower is better)
Translates to: LWEMHMWAYSFFSTR*LLEGCENRCQILNP
Trigger: TGGATTTAGTATTTGACATCTATTTTCACATCCTTCTAGGAGTCATCTTGTACTAAAGAAGCTGTAAGCCCACATGTGCATTTCCCAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CCA 90 bp ATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTaGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTT +
Preference number: 1 (lower is better)
Translates to: MCILRKNHSFFLPWH*VLIVQPCTVLQQLF
Trigger: AAAAAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
3UTR TCA 90 bp TTTGCAAGCACTGCAGTATCGTACTCAGGCATTCCTTATAGATTATaGTTACCCTTTGTCCTTCAATGTGTTGGAAAGGCTAAATTAGAA +
Preference number: 1 (lower is better)
Translates to: FASTAVSYSGIPYRL*LPFVLQCVGKAKLE
Trigger: TTCTAATTTAGCCTTTCCAACACATTGAAGGACAAAGGGTAATCATAATCTATAAGGAATGCCTGAGTACGATACTGCAGTGCTTGCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 90 bp AGAACTGTCCCTCACAAGGAGATTAATAATCTAAGAAAGAAAGCATaGTTTTGCTTCAGAACCACAGAGCTCTACGCTATTAATCTCCTA +
Preference number: 1 (lower is better)
Translates to: RTVPHKEINNLRKKA*FCFRTTELYAINLL
Trigger: TAGGAGATTAATAGCGTAGAGCTCTGTGGTTCTGAAGCAAAATCATGCTTTCTTTCTTAGATTATTAATCTCCTTGTGAGGGACAGTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 90 bp AATGAATCATTGTTGTGTCCTCTTGGAAGAGAAACATTCTTCCATTaGCTAGTAAGACTTCTAAGCCATCATATCCCAACATCATGTGGA +
Preference number: 1 (lower is better)
Translates to: NESLLCPLGRETFFH*LVRLLSHHIPTSCG
Trigger: TCCACATGATGTTGGGATATGATGGCTTAGAAGTCTTACTAGTCAATGGAAGAATGTTTCTCTTCCAAGAGGACACAACAATGATTCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CCA 90 bp TGGTACTTCTCCAAGTTACATCTGTTCCCTAGCAAAGCTATTTTGTaGGCAGGGTTACAACTTTGCTCAAAACATTTCATTTACATATGT +
Preference number: 1 (lower is better)
Translates to: WYFSKLHLFPSKAIL*AGLQLCSKHFIYIC
Trigger: ACATATGTAAATGAAATGTTTTGAGCAAAGTTGTAACCCTGCCCACAAAATAGCTTTGCTAGGGAACAGATGTAACTTGGAGAAGTACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 90 bp ATTGAAGTTGAGCATATGAATAGATACATTTCCTTGAGTGCCTATTaGAAGGATGGACAGATGTGCTATAAATTCTGCGGCAGAAAAGTA +
Preference number: 1 (lower is better)
Translates to: IEVEHMNRYISLSAY*KDGQMCYKFCGRKV
Trigger: TACTTTTCTGCCGCAGAATTTATAGCACATCTGTCCATCCTTTCAATAGGCACTCAAGGAAATGTATCTATTCATATGCTCAACTTCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 90 bp TTGCAGAGATGCTCGACTCTAATAGCAAAGACTGAACCTGACCAGTaGGAACTTAGCAAATGTATGGAATATTCACAAAGCATATTTATT +
Preference number: 1 (lower is better)
Translates to: LQRCSTLIAKTEPDQ*ELSKCMEYSQSIFI
Trigger: AATAAATATGCTTTGTGAATATTCCATACATTTGCTAAGTTCTCACTGGTCAGGTTCAGTCTTTGCTATTAGAGTCGAGCATCTCTGCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 90 bp ACAATCCTTAACACGTATTTCTTCCCTAAGTCTCCTTATTACCAATaGTCCAAATTGTATCCATGCTTAGTGAAACCTTTGTTTCCAAGC +
Preference number: 1 (lower is better)
Translates to: TILNTYFFPKSPYYQ*SKLYPCLVKPLFPS
Trigger: GCTTGGAAACAAAGGTTTCACTAAGCATGGATACAATTTGGATCATTGGTAATAAGGAGACTTAGGGAAGAAATACGTGTTAAGGATTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 90 bp GTGCAATATGAGAGTATCAGAATTGGGCTCTTAGGTACTCAGTATTaGCTCTACCAAATGAACTATGTTGTTGAATGCATATGTTACCAA +
Preference number: 1 (lower is better)
Translates to: VQYESIRIGLLGTQY*LYQMNYVVECICYQ
Trigger: TTGGTAACATATGCATTCAACAACATAGTTCATTTGGTAGAGTCAATACTGAGTACCTAAGAGCCCAATTCTGATACTCTCATATTGCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 90 bp ATAACATGCTATATATACATGGGGTACCTCAGGCACCTTCATACATaGCATGTACACGAAGCATATGAGATACTAAAATTGTATGAGGTT +
Preference number: 1 (lower is better)
Translates to: ITCYIYMGYLRHLHT*HVHEAYEILKLYEV
Trigger: AACCTCATACAATTTTAGTATCTCATATGCTTCGTGTACATGTCATGTATGAAGGTGCCTGAGGTACCCCATGTATATATAGCATGTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR GCA 90 bp TTTGTGGAAGGGATTAGAATAATTGCCACCCACATTATGGAGAAATaGACTAGATGTAGTACATGCTTTCTATGCATTTTAACTCATACC +
Preference number: 1 (lower is better)
Translates to: FVEGIRIIATHIMEK*TRCSTCFLCILTHT
Trigger: GGTATGAGTTAAAATGCATAGAAAGCATGTACTACATCTAGTGCATTTCTCCATAATGTGGGTGGCAATTATTCTAATCCCTTCCACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 90 bp AGCCTACCTCACAATTATTATATTTACATTCTCATCATAAAATTCTaGAGCAATCACATTGGTCACCAAAGCCTTGGCTTTAATAGGCTC +
Preference number: 1 (lower is better)
Translates to: SLPHNYYIYILIIKF*SNHIGHQSLGFNRL
Trigger: GAGCCTATTAAAGCCAAGGCTTTGGTGACCAATGTGATTGCTTCAGAATTTTATGATGAGAATGTAAATATAATAATTGTGAGGTAGGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 90 bp TTATCTACTGAATCTCTGAAAGATTCCTCAACTAGGAAGATCTTCTaGAAAGAAATAACATGTGGCATGAATATTCTCATAGGTTCTGCC +
Preference number: 1 (lower is better)
Translates to: LSTESLKDSSTRKIF*KEITCGMNILIGSA
Trigger: GGCAGAACCTATGAGAATATTCATGCCACATGTTATTTCTTTTCAGAAGATCTTCCTAGTTGAGGAATCTTTCAGAGATTCAGTAGATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR TCA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTACTGGCCATAAGCAACTaGCAGAGTGGCTCTTCCCCT +
Preference number: 2 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLLAISN*QSGSSP
Trigger: AGGGGAAGAGCCACTCTGTCAGTTGCTTATGGCCAG...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CCA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTACTGCATTGCCCAGGCTaGTCTGGAAATCCTGACCTC +
Preference number: 2 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLLHCPG*SGNPDL
Trigger: GAGGTCAGGATTTCCAGACCAGCCTGGGCAATGCAG...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CCA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTCGCTGCACTCTGGCCTaGGGGACAGAGCGAGACACT +
Preference number: 2 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLRCTLA*GTERDT
Trigger: AGTGTCTCGCTCTGTCCCCCAGGCCAGAGTGCAGCG...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CCA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTATTTCAAAAGCTGCGATaGCCTCTGCAGCCAAGGTCC +
Preference number: 2 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLFQKLR*PLQPRS
Trigger: GGACCTTGGCTGCAGAGGCCATCGCAGCTTTTGAAA...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CCA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTGCACCCACCAGGGCCTaGGCATGGCTCTTAACACTG +
Preference number: 2 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLAPTRA*AWLLTL
Trigger: CAGTGTTAAGAGCCATGCCCAGGCCCTGGTGGGTGC...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 90 bp GTGTGGGCTCTCTCCAAGGTGGCTTTGGTGAAGGAGACAGTTCGCTaGGACCAGGGTTTCTTTCATGTGCTTCTAGGAAAAGGCAGCAAG +
Preference number: 2 (lower is better)
Translates to: VWALSKVALVKETVR*DQGFFHVLLGKGSK
Trigger: CTTGCTGCCTTTTCCTAGAAGCACATGAAAGAAACCCTGGTCCAAGCGAACTGTCTCCTTCACCAAAGCCACCTTGGAGAGAGCCCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CCA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTACCTGTCTTCCGGACCTaGAGGTATAGGAATAGTGTG +
Preference number: 2 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLPVFRT*RYRNSV
Trigger: CACACTATTCCTATACCTCCAGGTCCGGAAGACAGG...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR TCA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATTCTCCTGGGCTCAAGTaGCCCTCCTGCTTCAACCTC +
Preference number: 2 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDSPGLK*PSCFNL
Trigger: GAGGTTGAAGCAGGAGGGTCACTTGAGCCCAGGAGA...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR GCA 90 bp ACGAGCTCTAACTCTAGACTTGGAGGCAGTGAGGTGATCAGAACAAGCTATTTTAGCTGCGATGGCCTCTaGAGCCAAGGTCCGGAGATC +
Preference number: 2 (lower is better)
Translates to: TSSNSRLGGSEVIRTSYFSCDGL*SQGPEI
Trigger: GATCTCCGGACCTTGGCTGCAGAGGCCATCGCAGCT...AAAATAGCTTGTTCTGATCACCTCACTGCCTCCAAGTCTAGAGTTAGAGCTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 90 bp ACTCTGAGACAGAGTAGCATACAAGAGGCTTACTTGGGAGGGTTTTaGCAGCTGACACCTGTGGAAGGCTATGAAGAACCAGGACTGGTA +
Preference number: 2 (lower is better)
Translates to: TLRQSSIQEAYLGGF*QLTPVEGYEEPGLV
Trigger: TACCAGTCCTGGTTCTTCATAGCCTTCCACAGGTGTCAGCTGCAAAAACCCTCCCAAGTAAGCCTCTTGTATGCTACTCTGTCTCAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR TCA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTAGGAGAAAACACATTTaGGAGGCCACTCTGGTGCTG +
Preference number: 2 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLRRKHI*EATLVL
Trigger: CAGCACCAGAGTGGCCTCTCAAATGTGTTTTCTCCT...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR GCA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTAGTCATCAGGAAGTGTTaGCTGGAGAAAAAGACAGAA +
Preference number: 2 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLVIRKC*LEKKTE
Trigger: TTCTGTCTTTTTCTCCAGGCAACACTTCCTGATGAC...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CCA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATCTGAGTCACCTCATTTaGCCAGGCAGCATCAAGCTC +
Preference number: 2 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDLSHLI*PGSIKL
Trigger: GAGCTTGATGCTGCCTGGCCAAATGAGGTGACTCAG...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CCA 90 bp AAGTGCCAATTAAGTAGGATGAATTTATGTGGGAGGGTGAACACCTGCTCAAGCACCAGGGCCTGGGCATaGCTCTTAACACTGGATGAG +
Preference number: 2 (lower is better)
Translates to: KCQLSRMNLCGRVNTCSSTRAWA*LLTLDE
Trigger: CTCATCCAGTGTTAAGAGCCATGCCCAGGCCCTGGT...GCTTGAGCAGGTGTTCACCCTCCCACATAAATTCATCCTACTTAATTGGCACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CCA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTAAAATTGGCAGGTCAGTaGTTGAAGCAGGATTCCAAA +
Preference number: 2 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLKLAGQ*LKQDSK
Trigger: TTTGGAATCCTGCTTCAACCACTGACCTGCCAATTT...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CCA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTAAAACAGAATAGAGATTaGCAGCAGACCACAGGAATG +
Preference number: 2 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLKQNRD*QQTTGM
Trigger: CATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTT...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CCA 90 bp AAGTGCCAATTAAGTAGGATGAATTTATGTGGGAGGGTGAACACCTGCTCAAGCACTGAGGCAGGAGAATaGTGTGAACTCGGAAGGCGG +
Preference number: 2 (lower is better)
Translates to: KCQLSRMNLCGRVNTCSSTEAGE*CELGRR
Trigger: CCGCCTTCCGAGTTCACACCATTCTCCTGCCTCAGT...GCTTGAGCAGGTGTTCACCCTCCCACATAAATTCATCCTACTTAATTGGCACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 90 bp TTACCAAGCTCTGAATGGGATCAGATTCTATCTGAGTCACCTCATTaGGCCAGGCAGCATCAAGCTCTTTATTGGCCAGTGAGCATGGCT +
Preference number: 2 (lower is better)
Translates to: LPSSEWDQILSESPH*ARQHQALYWPVSMA
Trigger: AGCCATGCTCACTGGCCAATAAAGAGCTTGATGCTGCCTGGCCAAATGAGGTGACTCAGATAGAATCTGATCCCATTCAGAGCTTGGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 90 bp CCAAGGAAATGGACTCTGAGACAGAGTAGCATACAAGAGGCTTACTaGGGAGGGTTTTTGCAGCTGACACCTGTGGAAGGCTATGAAGAA +
Preference number: 2 (lower is better)
Translates to: PRKWTLRQSSIQEAY*GGFLQLTPVEGYEE
Trigger: TTCTTCATAGCCTTCCACAGGTGTCAGCTGCAAAAACCCTCCCAAGTAAGCCTCTTGTATGCTACTCTGTCTCAGAGTCCATTTCCTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 90 bp GCCACACTATGTGGCCTATGTTCTACTCAAGGGGCTCAAATCTCTTaGCAGAGATGCTCGACTCTAATAGCAAAGACTGAACCTGACCAG +
Preference number: 2 (lower is better)
Translates to: ATLCGLCSTQGAQIS*QRCSTLIAKTEPDQ
Trigger: CTGGTCAGGTTCAGTCTTTGCTATTAGAGTCGAGCATCTCTGCAAAGAGATTTGAGCCCCTTGAGTAGAACATAGGCCACATAGTGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 90 bp GCCTTCAAACATCCAGGGAGCCCATCAAGAACAGGCCCAGTTTCTTaGGAAAGGATTTCCAGACATGCCGGACTAAACTCCCAGAAATTT +
Preference number: 2 (lower is better)
Translates to: AFKHPGSPSRTGPVS*ERISRHAGLNSQKF
Trigger: AAATTTCTGGGAGTTTAGTCCGGCATGTCTGGAAATCCTTTCCAAAGAAACTGGGCCTGTTCTTGATGGGCTCCCTGGATGTTTGAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR GCA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATTGGGGCACTGTTTTCTaGTTTGCTTTCCCATGCAGC +
Preference number: 2 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDWGTVF*FAFPCS
Trigger: GCTGCATGGGAAAGCAAAGCAGAAAACAGTGCCCCA...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR TCA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATACTCTTTCTCCACAGTaGCAAGCATTCCCCATTGCT +
Preference number: 2 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDTLSPQ*QAFPIA
Trigger: AGCAATGGGGAATGCTTGTCACTGTGGAGAAAGAGT...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR TCA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTACAGGTTAACTTTCAGTaGATATACACTAGTCCTATG +
Preference number: 2 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLQVNFQ*IYTSPM
Trigger: CATAGGACTAGTGTATATTCACTGAAAGTTAACCTG...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR GCA 90 bp AAGTGCCAATTAAGTAGGATGAATTTATGTGGGAGGGTGAACACCTGCTCAAGCCTGTTGCAATGGCCTTaGTTTGTGCTCTTCTGGTGG +
Preference number: 2 (lower is better)
Translates to: KCQLSRMNLCGRVNTCSSLLQWP*FVLFWW
Trigger: CCACCAGAAGAGCACAAAGCAAGGCCATTGCAACAG...GCTTGAGCAGGTGTTCACCCTCCCACATAAATTCATCCTACTTAATTGGCACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR GCA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTATCTAATTATGACAGTTaGATCAACCTTACCAACAGG +
Preference number: 2 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLSNYDS*INLTNR
Trigger: CCTGTTGGTAAGGTTGATGCAACTGTCATAATTAGA...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR GCA 90 bp AAGTGCCAATTAAGTAGGATGAATTTATGTGGGAGGGTGAACACCTGCTCAAGCGGGACTATAGGCACATaGCACCACTCCTGGCTAATT +
Preference number: 2 (lower is better)
Translates to: KCQLSRMNLCGRVNTCSSGTIGT*HHSWLI
Trigger: AATTAGCCAGGAGTGGTGGCATGTGCCTATAGTCCC...GCTTGAGCAGGTGTTCACCCTCCCACATAAATTCATCCTACTTAATTGGCACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR GCA 90 bp ACGAGCTCTAACTCTAGACTTGGAGGCAGTGAGGTGATCAGAACAAGCTATTTTCATCGCAATGGCCCGTaGTCCAAACTCTTCCATTTC +
Preference number: 2 (lower is better)
Translates to: TSSNSRLGGSEVIRTSYFHRNGP*SKLFHF
Trigger: GAAATGGAAGAGTTTGGAGCACGGGCCATTGCGATG...AAAATAGCTTGTTCTGATCACCTCACTGCCTCCAAGTCTAGAGTTAGAGCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR GCA 90 bp ACGAGCTCTAACTCTAGACTTGGAGGCAGTGAGGTGATCAGAACAAGCTATTTTCTGTGTCTCCTAATTTaGTTCTGGCTCCCAGAAGGC +
Preference number: 2 (lower is better)
Translates to: TSSNSRLGGSEVIRTSYFLCLLI*FWLPEG
Trigger: GCCTTCTGGGAGCCAGAAGCAAATTAGGAGACACAG...AAAATAGCTTGTTCTGATCACCTCACTGCCTCCAAGTCTAGAGTTAGAGCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CCA 90 bp AAGTGCCAATTAAGTAGGATGAATTTATGTGGGAGGGTGAACACCTGCTCAAGCGTAATCTTGATCTCCTaGGCTCAAGTGACCCTCCTG +
Preference number: 2 (lower is better)
Translates to: KCQLSRMNLCGRVNTCSSVILIS*AQVTLL
Trigger: CAGGAGGGTCACTTGAGCCCAGGAGATCAAGATTAC...GCTTGAGCAGGTGTTCACCCTCCCACATAAATTCATCCTACTTAATTGGCACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CCA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTGTTTGCCACACTATGTaGCCTATGTTCTACTCAAGG +
Preference number: 2 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLVCHTM*PMFYSR
Trigger: CCTTGAGTAGAACATAGGCCACATAGTGTGGCAAAC...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 90 bp TCTGAGATATTCATGGAAGAGCAGACTGGGGGAAATTTGCTGTCATaGCAGGAGCATGGAAAATCACTTAGTTCTACCGGGAGTGACAGA +
Preference number: 2 (lower is better)
Translates to: SEIFMEEQTGGNLLS*QEHGKSLSSTGSDR
Trigger: TCTGTCACTCCCGGTAGAACTAAGTGATTTTCCATGCTCCTGCAATGACAGCAAATTTCCCCCAGTCTGCTCTTCCATGAATATCTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 90 bp TCAGCTGTGCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTaGGTCCCAGGCAACTTCCATATCTTAAGCCCCTTCCTTAAACTT +
Preference number: 2 (lower is better)
Translates to: SAVHVCVTVSLGQSM*VPGNFHILSPFLKL
Trigger: AAGTTTAAGGAAGGGGCTTAAGATATGGAAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGCACAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR GCA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTGTCACCAGGCTGGAGTaGAATGGCATGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVVTRLE*NGMILA
Trigger: AGCCAAGATCATGCCATTGCACTCCAGCCTGGTGAC...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR GCA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTAGTAGACTATTGCACCTaGATTGTAGAGACATTAAAA +
Preference number: 2 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLVDYCT*IVETLK
Trigger: TTTTAATGTCTCTACAATGCAGGTGCAATAGTCTAC...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR GCA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATCAGGTGGTAGACTATTaGACCTGCATTGTAGAGACA +
Preference number: 2 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDQVVDY*TCIVET
Trigger: TGTCTCTACAATGCAGGTGCAATAGTCTACCACCTG...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR GCA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTAAACCACAACCACTCTaGTGCAACTGGACTAAATGT +
Preference number: 2 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLKPQPL*CNWTKC
Trigger: ACATTTAGTCCAGTTGCAGCAGAGTGGTTGTGGTTT...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CCA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTATACTTCTTACCAGACTaGTCACGTACTTTTTGTTTT +
Preference number: 2 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLYFLPD*SRTFCF
Trigger: AAAACAAAAAGTACGTGACCAGTCTGGTAAGAAGTA...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CCA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTCCTACCCAAGGAATATaGCAGGAATGGTGGGTCCAC +
Preference number: 2 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVPTQGI*QEWWVH
Trigger: GTGGACCCACCATTCCTGCCATATTCCTTGGGTAGG...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CCA 90 bp AAAATATGCCTAACATTCATAACATGCTATATATACATGGGGTACCTCAGGCACCCTTGCTCTCTGCGGTaGCGTCTGTCCATCGCAATG +
Preference number: 2 (lower is better)
Translates to: KICLTFITCYIYMGYLRHPCSLR*RLSIAM
Trigger: CATTGCGATGGACAGACGCCACCGCAGAGAGCAAGG...GTGCCTGAGGTACCCCATGTATATATAGCATGTTATGAATGTTAGGCATATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CCA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTACTCTGTCTTCAGCCTaGGCGAAAGGCAAGAGGCTA +
Preference number: 2 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVTLSSA*AKGKRL
Trigger: TAGCCTCTTGCCTTTCGCCCAGGCTGAAGACAGAGT...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 90 bp ATTGGCAGGTGTGATTCCAGCGGCTTTGGAAGAGAGGTCTTTGACTaGTATCTTAAAGGACAAATATGTCATCAGGCAAAGGGGAATGTC +
Preference number: 2 (lower is better)
Translates to: IGRCDSSGFGREVFD*YLKGQICHQAKGNV
Trigger: GACATTCCCCTTTGCCTGATGACATATTTGTCCTTTAAGATACAAGTCAAAGACCTCTCTTCCAAAGCCGCTGGAATCACACCTGCCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 90 bp AAACTGCATGACCATCTGCCTGAAACATTTTATGCACCGTTGAATTaGCTGGATCATTGTAACCAAGTAGCAAAGACAGCAGCCTGGACC +
Preference number: 2 (lower is better)
Translates to: KLHDHLPETFYAPLN*LDHCNQVAKTAAWT
Trigger: GGTCCAGGCTGCTGTCTTTGCTACTTGGTTACAATGATCCAGCAAATTCAACGGTGCATAAAATGTTTCAGGCAGATGGTCATGCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 90 bp ACCATCTCCACCTCAACTTCCCTTGACACTCATGTCTTAGCAAACTaGCTAATCAAACCAGCAACACAAAGATGGCCTCTGCCTCATTTT +
Preference number: 2 (lower is better)
Translates to: TISTSTSLDTHVLAN*LIKPATQRWPLPHF
Trigger: AAAATGAGGCAGAGGCCATCTTTGTGTTGCTGGTTTGATTAGCAAGTTTGCTAAGACATGAGTGTCAAGGGAAGTTGAGGTGGAGATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR TCA 90 bp AAGTGCCAATTAAGTAGGATGAATTTATGTGGGAGGGTGAACACCTGCTCAAGCGTCTTACTGCTACACTaGTCACCTTCACAGACTCTT +
Preference number: 2 (lower is better)
Translates to: KCQLSRMNLCGRVNTCSSVLLLH*SPSQTL
Trigger: AAGAGTCTGTGAAGGTGATCAGTGTAGCAGTAAGAC...GCTTGAGCAGGTGTTCACCCTCCCACATAAATTCATCCTACTTAATTGGCACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR TCA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTACATTTACCAAGCTCTaGATGGGATCAGATTCTATC +
Preference number: 2 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLTFTKL*MGSDSI
Trigger: GATAGAATCTGATCCCATTCAGAGCTTGGTAAATGT...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR TCA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATTGCCCTAATAGATTGTaGCATACGTGCTTTTTCAGC +
Preference number: 2 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDCPNRL*HTCFFS
Trigger: GCTGAAAAAGCACGTATGTCACAATCTATTAGGGCA...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR TCA 90 bp AAGTGCCAATTAAGTAGGATGAATTTATGTGGGAGGGTGAACACCTGCTCAAGCGGATCATTACTCCACTaGTTGCCTTACTGTCCTGAT +
Preference number: 2 (lower is better)
Translates to: KCQLSRMNLCGRVNTCSSGSLLH*LPYCPD
Trigger: ATCAGGACAGTAAGGCAATCAGTGGAGTAATGATCC...GCTTGAGCAGGTGTTCACCCTCCCACATAAATTCATCCTACTTAATTGGCACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR GCA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTTTCAGCTCTACTGACTaGACAGTTTCAATTCTTGTG +
Preference number: 2 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLFSSTD*TVSILV
Trigger: CACAAGAATTGAAACTGTGCAGTCAGTAGAGCTGAA...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR GCA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAATTCCTCGTATCTGCCTaGGATTGTCCCATGCAGTGG +
Preference number: 2 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKFLVSA*DCPMQW
Trigger: CCACTGCATGGGACAATCGCAGGCAGATACGAGGAA...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR GCA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTTTCAAGCAATTCTGCTaGCTCAGCCTCCCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVFKQFC*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCAGCAGAATTGCTTGAA...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR GCA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTCTGGGAGAAGGAGGTTaGATTGAGCCAAGATTGTGC +
Preference number: 2 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVLGEGG*IEPRLC
Trigger: GCACAATCTTGGCTCAATGCAACCTCCTTCTCCCAG...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CCA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTCTGAATGCTCATTCCTaGGGCTCTTTTGACACCCAC +
Preference number: 2 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVLNAHS*GSFDTH
Trigger: GTGGGTGTCAAAAGAGCCCCAGGAATGAGCATTCAG...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 90 bp AACTCAAAAAGAGGAGCATCACCAGACACCAGATCTGCAGGCAACTaGATCTTGGGCTTCACAGCCTCAAGAATTGGAAGTAATAAATGT +
Preference number: 2 (lower is better)
Translates to: NSKRGASPDTRSAGN*ILGFTASRIGSNKC
Trigger: ACATTTATTACTTCCAATTCTTGAGGCTGTGAAGCCCAAGATCAAGTTGCCTGCAGATCTGGTGTCTGGTGATGCTCCTCTTTTTGAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR TCA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATACCAGGAATTTATTCTaGCAGCTTCAACAGCAAAGT +
Preference number: 2 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDTRNLF*QLQQQS
Trigger: ACTTTGCTGTTGAAGCTGTCAGAATAAATTCCTGGT...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR TCA 90 bp AAGTGCCAATTAAGTAGGATGAATTTATGTGGGAGGGTGAACACCTGCTCAAGCGGTATAGGAATAGTGTaGAACTATCGGGCCATTTCT +
Preference number: 2 (lower is better)
Translates to: KCQLSRMNLCGRVNTCSSGIGIV*NYRAIS
Trigger: AGAAATGGCCCGATAGTTTCACACTATTCCTATACC...GCTTGAGCAGGTGTTCACCCTCCCACATAAATTCATCCTACTTAATTGGCACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR TCA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATCCCAGGAAGATAAACTaGAAGCATTTTGTTTGCTCA +
Preference number: 2 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDPRKIN*KHFVCS
Trigger: TGAGCAAACAAAATGCTTTCAGTTTATCTTCCTGGG...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR TCA 90 bp ACGAGCTCTAACTCTAGACTTGGAGGCAGTGAGGTGATCAGAACAAGCTATTTTAATGATACCTTAATCTaGGTCCCAAGGACCACTTTC +
Preference number: 2 (lower is better)
Translates to: TSSNSRLGGSEVIRTSYFNDTLI*VPRTTF
Trigger: GAAAGTGGTCCTTGGGACTCAGATTAAGGTATCATT...AAAATAGCTTGTTCTGATCACCTCACTGCCTCCAAGTCTAGAGTTAGAGCTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR TCA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAAACCTGTGGAAGGCTATaGAGAACCAGGACTGGTAGA +
Preference number: 2 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKTCGRL*RTRTGR
Trigger: TCTACCAGTCCTGGTTCTTCATAGCCTTCCACAGGT...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR GCA 90 bp CAGGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGCTGCGTGTCTTTATGTaGACACACGAGTGTGTTCTC +
Preference number: 2 (lower is better)
Translates to: QEFILTASTAKWLMCILRLRVFM*THECVL
Trigger: GAGAACACACTCGTGTGTGCACATAAAGACACGCAG...CCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
3UTR-3UTR GCA 90 bp ATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCCTGCGTGTCTTTATGTaGACACACGAGTGTGTTCTC +
Preference number: 2 (lower is better)
Translates to: MCILRKNHSFFLPWHWVLLRVFM*THECVL
Trigger: GAGAACACACTCGTGTGTGCACATAAAGACACGCAG...GAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
3UTR-3UTR GCA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATAATCTTAGCAGTCTTTaGCATGTTGTACACAAGGTG +
Preference number: 2 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDNLSSL*HVVHKV
Trigger: CACCTTGTGTACAACATGGCAAAGACTGCTAAGATT...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR GCA 90 bp TTCGATTATCTTTTACTCCTGTCAAGATTTTGTCAACTTAACGAGAAGGCATGCCCTGCGATTGTCCCATaGAGTGGGCTGCTAATGCAT +
Preference number: 2 (lower is better)
Translates to: FDYLLLLSRFCQLNEKACPAIVP*SGLLMH
Trigger: ATGCATTAGCAGCCCACTGCATGGGACAATCGCAGG...GCATGCCTTCTCGTTAAGTTGACAAAATCTTGACAGGAGTAAAAGATAATCGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR GCA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATTGCTCTGTGTATGTGTaGATACCTAAAAGGTATTCG +
Preference number: 2 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDCSVYV*IPKRYS
Trigger: CGAATACCTTTTAGGTATGCACACATACACAGAGCA...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR GCA 90 bp ACGAGCTCTAACTCTAGACTTGGAGGCAGTGAGGTGATCAGAACAAGCTATTTTATGTTTTGCAAGCACTaGAGTATCGTACTCAGGCAT +
Preference number: 2 (lower is better)
Translates to: TSSNSRLGGSEVIRTSYFMFCKH*SIVLRH
Trigger: ATGCCTGAGTACGATACTGCAGTGCTTGCAAAACAT...AAAATAGCTTGTTCTGATCACCTCACTGCCTCCAAGTCTAGAGTTAGAGCTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CCA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTAAGGTCTGTAACTCTTaGCAAAAGTACCCAAGAATA +
Preference number: 2 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLKVCNS*QKYPRI
Trigger: TATTCTTGGGTACTTTTGCCAAGAGTTACAGACCTT...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CCA 90 bp AAGTGCCAATTAAGTAGGATGAATTTATGTGGGAGGGTGAACACCTGCTCAAGCCAGGCTCTGAGACACTaGAATGCATTAGAAAAAGTG +
Preference number: 2 (lower is better)
Translates to: KCQLSRMNLCGRVNTCSSQALRH*NALEKV
Trigger: CACTTTTTCTAATGCATTCCAGTGTCTCAGAGCCTG...GCTTGAGCAGGTGTTCACCCTCCCACATAAATTCATCCTACTTAATTGGCACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CCA 90 bp AAGTGCCAATTAAGTAGGATGAATTTATGTGGGAGGGTGAACACCTGCTCAAGCTTGTGTGTTATCCCATaGCACCTCATCTTCCCAATT +
Preference number: 2 (lower is better)
Translates to: KCQLSRMNLCGRVNTCSSLCVIP*HLIFPI
Trigger: AATTGGGAAGATGAGGTGCCATGGGATAACACACAA...GCTTGAGCAGGTGTTCACCCTCCCACATAAATTCATCCTACTTAATTGGCACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CCA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAACACAGTGGAGGATGGTaGAGCAGAGTAAGGACAAGA +
Preference number: 2 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKHSGGW*SRVRTR
Trigger: TCTTGTCCTTACTCTGCTCCACCATCCTCCACTGTG...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CCA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTAATCTCCTACGAGATTaGCAAAGTTTTACAAACTGC +
Preference number: 2 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLNLLRD*QSFTNC
Trigger: GCAGTTTGTAAAACTTTGCCAATCTCGTAGGAGATT...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CCA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTAACAAAACAGGCCAGTaGCTCAGGCCTATAATCCCA +
Preference number: 2 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVNKTGQ*LRPIIP
Trigger: TGGGATTATAGGCCTGAGCCACTGGCCTGTTTTGTT...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 90 bp GTGGTTGATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTaGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCA +
Preference number: 2 (lower is better)
Translates to: VVDVYPKEKSLVLFA*ALGSHCTTLYSTSA
Trigger: TGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACATCAACCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
3UTR CAA 90 bp CAGCATGAAGATGTTGTCCTCCCTGGTGGGGAAGGAAGTTCTGATTaGTGTGAAATGACTAAGACCATTATGATAGGTGCTAGTAGAAAA +
Preference number: 2 (lower is better)
Translates to: QHEDVVLPGGEGSSD*CEMTKTIMIGASRK
Trigger: TTTTCTACTAGCACCTATCATAATGGTCTTAGTCATTTCACACAAATCAGAACTTCCTTCCCCACCAGGGAGGACAACATCTTCATGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 90 bp TATCAGATGAAGAGATTTCTTCAGGGACATAGTGAGGGAGAAGATTaGCCTGATTTGGCTAAGAACGCATTTCACTATTCTGTGAGGCCT +
Preference number: 2 (lower is better)
Translates to: YQMKRFLQGHSEGED*PDLAKNAFHYSVRP
Trigger: AGGCCTCACAGAATAGTGAAATGCGTTCTTAGCCAAATCAGGCAAATCTTCTCCCTCACTATGTCCCTGAAGAAATCTCTTCATCTGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 90 bp CAAGCTATTAAGAGAGTGAATAGGAGGCAGTTTCTAATGATGTGTTaGCCACACTATGTGGCCTATGTTCTACTCAAGGGGCTCAAATCT +
Preference number: 2 (lower is better)
Translates to: QAIKRVNRRQFLMMC*PHYVAYVLLKGLKS
Trigger: AGATTTGAGCCCCTTGAGTAGAACATAGGCCACATAGTGTGGCAAACACATCATTAGAAACTGCCTCCTATTCACTCTCTTAATAGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 90 bp AACAACATTCATAGCTGTTCATCAAGTAATTGGGAAGCTATAGCTTaGGTCAGCTGTGCATGTATGTGTCACTGTGTCTCTTGGACAGAG +
Preference number: 2 (lower is better)
Translates to: NNIHSCSSSNWEAIA*VSCACMCHCVSWTE
Trigger: CTCTGTCCAAGAGACACAGTGACACATACATGCACAGCTGACCAAAGCTATAGCTTCCCAATTACTTGATGAACAGCTATGAATGTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR TCA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTGAACCCCATAAGAAATaGCAGGAACCTCTTCATCCT +
Preference number: 2 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVEPHKK*QEPLHP
Trigger: AGGATGAAGAGGTTCCTGTCATTTCTTATGGGGTTC...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR TCA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAAGGATCAGATTCTATCTaGGTCACCTCATTTGGCCAG +
Preference number: 2 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKGSDSI*VTSFGQ
Trigger: CTGGCCAAATGAGGTGACTCAGATAGAATCTGATCC...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR TCA 90 bp AAGTGCCAATTAAGTAGGATGAATTTATGTGGGAGGGTGAACACCTGCTCAAGCTGGAATGGTAAGTCATaGGCAAAACTGCTATTCTCA +
Preference number: 2 (lower is better)
Translates to: KCQLSRMNLCGRVNTCSSWNGKS*AKLLFS
Trigger: TGAGAATAGCAGTTTTGCTCATGACTTACCATTCCA...GCTTGAGCAGGTGTTCACCCTCCCACATAAATTCATCCTACTTAATTGGCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR TCA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATATTATTCCTTTAGATTaGGTTCCATCGTGGTGCTTA +
Preference number: 2 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDIIPLD*VPSWCL
Trigger: TAAGCACCACGATGGAACTCAATCTAAAGGAATAAT...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR TCA 90 bp ACGAGCTCTAACTCTAGACTTGGAGGCAGTGAGGTGATCAGAACAAGCTATTTTGCTCTTAACACTGGATaGGGTACAACAATTTACAGA +
Preference number: 2 (lower is better)
Translates to: TSSNSRLGGSEVIRTSYFALNTG*GTTIYR
Trigger: TCTGTAAATTGTTGTACCTCATCCAGTGTTAAGAGC...AAAATAGCTTGTTCTGATCACCTCACTGCCTCCAAGTCTAGAGTTAGAGCTCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR TCA 90 bp TTCGATTATCTTTTACTCCTGTCAAGATTTTGTCAACTTAACGAGAAGGCATGCAAGCTACATCACTCCTaGTCACATGAGAAGGCACCC +
Preference number: 2 (lower is better)
Translates to: FDYLLLLSRFCQLNEKACKLHHS*SHEKAP
Trigger: GGGTGCCTTCTCATGTGATCAGGAGTGATGTAGCTT...GCATGCCTTCTCGTTAAGTTGACAAAATCTTGACAGGAGTAAAAGATAATCGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR TCA 90 bp AAAATATGCCTAACATTCATAACATGCTATATATACATGGGGTACCTCAGGCACTCCACTGCTGCACCTTaGATCTGGGAATTGTGTGAG +
Preference number: 2 (lower is better)
Translates to: KICLTFITCYIYMGYLRHSTAAP*IWELCE
Trigger: CTCACACAATTCCCAGATTCAAGGTGCAGCAGTGGA...GTGCCTGAGGTACCCCATGTATATATAGCATGTTATGAATGTTAGGCATATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR GCA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTTGCTTTGCTTTCCCATaGAGCTGGAATGGTAAGTCA +
Preference number: 2 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVCFAFP*SWNGKS
Trigger: TGACTTACCATTCCAGCTGCATGGGAAAGCAAAGCA...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CCA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATAAGATTTGCCTGATTTaGCTAAGAACGCATTTCACT +
Preference number: 2 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDKICLI*LRTHFT
Trigger: AGTGAAATGCGTTCTTAGCCAAATCAGGCAAATCTT...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CCA 90 bp ACGAGCTCTAACTCTAGACTTGGAGGCAGTGAGGTGATCAGAACAAGCTATTTTTGCTTTTCTGCAAGCTaGTTCAGTTTTGAGTTTGTC +
Preference number: 2 (lower is better)
Translates to: TSSNSRLGGSEVIRTSYFCFSAS*FSFEFV
Trigger: GACAAACTCAAAACTGAACCAGCTTGCAGAAAAGCA...AAAATAGCTTGTTCTGATCACCTCACTGCCTCCAAGTCTAGAGTTAGAGCTCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CCA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTGCTCAACTTTATGGTTaGTTGATCAAAACTCATGAT +
Preference number: 2 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLAQLYG*LIKTHD
Trigger: ATCATGAGTTTTGATCAACCAACCATAAAGTTGAGC...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 90 bp GCAAAGTGGTTGATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTaGCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTT +
Preference number: 2 (lower is better)
Translates to: AKWLMCILRKNHSFF*PWHWVLIVQPCTVL
Trigger: AAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACATCAACCACTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
3UTR CAA 90 bp TTTTACAAACTGCATGACCATCTGCCTGAAACATTTTATGCACCGTaGAATTTGCTGGATCATTGTAACCAAGTAGCAAAGACAGCAGCC +
Preference number: 2 (lower is better)
Translates to: FYKLHDHLPETFYAP*NLLDHCNQVAKTAA
Trigger: GGCTGCTGTCTTTGCTACTTGGTTACAATGATCCAGCAAATTCAACGGTGCATAAAATGTTTCAGGCAGATGGTCATGCAGTTTGTAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 90 bp ATTACAGTTCAGTTGCATTACTACTCGGGATCCAATAGCCAACAGTaGAGCCTCTTTCGGCATCTATTTCTATTAGCAAGACAAGAACTG +
Preference number: 2 (lower is better)
Translates to: ITVQLHYYSGSNSQQ*SLFRHLFLLARQEL
Trigger: CAGTTCTTGTCTTGCTAATAGAAATAGATGCCGAAAGAGGCTCAACTGTTGGCTATTGGATCCCGAGTAGTAATGCAACTGAACTGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR TCA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTATCTGCCCTTTCATCTaGCCACCAGGAATTTATTCT +
Preference number: 2 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVICPFI*PPGIYS
Trigger: AGAATAAATTCCTGGTGGTCAGATGAAAGGGCAGAT...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR TCA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAAGCATACTGTGGTCTTTaGGCAAGGCTAATTTTGCAC +
Preference number: 2 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKAYCGL*ARLILH
Trigger: GTGCAAAATTAGCCTTGCTCAAAGACCACAGTATGC...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR TCA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTTGCCATCCGGTTAACTaGATTTGTCAAGGAAAAGGA +
Preference number: 2 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVCHPVN*ICQGKG
Trigger: TCCTTTTCCTTGACAAATTCAGTTAACCGGATGGCA...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR GCA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTAAGGATGGACAGATGTaGTATAAATTCTGCGGCAGA +
Preference number: 2 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVKDGQM*YKFCGR
Trigger: TCTGCCGCAGAATTTATAGCACATCTGTCCATCCTT...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR GCA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAAGTTCTTCCATTTGACTaGTACCATCCCCACTATCAG +
Preference number: 2 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKVLPFD*YHPHYQ
Trigger: CTGATAGTGGGGATGGTAGCAGTCAAATGGAAGAAC...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CCA 90 bp CAGGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGTTTTTGCCTTGGCATTaGGTTCTCATTGTACAACCC +
Preference number: 2 (lower is better)
Translates to: QEFILTASTAKWLMCILRFLPWH*VLIVQP
Trigger: GGGTTGTACAATGAGAACCCAATGCCAAGGCAAAAA...CCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
3UTR-3UTR CCA 90 bp AAAATATGCCTAACATTCATAACATGCTATATATACATGGGGTACCTCAGGCACAGCATCCATTCCCTGTaGACTGCAATATTGCCTCGT +
Preference number: 2 (lower is better)
Translates to: KICLTFITCYIYMGYLRHSIHSL*TAILPR
Trigger: ACGAGGCAATATTGCAGTCCACAGGGAATGGATGCT...GTGCCTGAGGTACCCCATGTATATATAGCATGTTATGAATGTTAGGCATATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR TCA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTACTAACAAAGTCAGCTaGCATAACAGAACCACTGAT +
Preference number: 2 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVTNKVS*HNRTTD
Trigger: ATCAGTGGTTCTGTTATGTCAGCTGACTTTGTTAGT...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR TCA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAACTTAAGCATTGCACATaGCTGTCTCCATTGTACCAT +
Preference number: 2 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKLKHCT*LSPLYH
Trigger: ATGGTACAATGGAGACAGTCATGTGCAATGCTTAAG...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR TCA 90 bp TTCGATTATCTTTTACTCCTGTCAAGATTTTGTCAACTTAACGAGAAGGCATGCCTCAGTGGTAATTCCTaGCTCTGCCATTTACAGGAT +
Preference number: 2 (lower is better)
Translates to: FDYLLLLSRFCQLNEKACLSGNS*LCHLQD
Trigger: ATCCTGTAAATGGCAGAGTCAGGAATTACCACTGAG...GCATGCCTTCTCGTTAAGTTGACAAAATCTTGACAGGAGTAAAAGATAATCGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR GCA 90 bp ACGAGCTCTAACTCTAGACTTGGAGGCAGTGAGGTGATCAGAACAAGCTATTTTTTTTCTTTCTATACATaGTTCAGCCTACCTCACAAT +
Preference number: 2 (lower is better)
Translates to: TSSNSRLGGSEVIRTSYFFSFYT*FSLPHN
Trigger: ATTGTGAGGTAGGCTGAAGCATGTATAGAAAGAAAA...AAAATAGCTTGTTCTGATCACCTCACTGCCTCCAAGTCTAGAGTTAGAGCTCGT
40% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR GCA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAAATTTTAAAGGCTGGTTaGTTCAGGCAACTTGTGGTG +
Preference number: 2 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKILKAG*FRQLVV
Trigger: CACCACAAGTTGCCTGAAGCAACCAGCCTTTAAAAT...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CCA 90 bp TTCGATTATCTTTTACTCCTGTCAAGATTTTGTCAACTTAACGAGAAGGCATGCGCTACAACATCAGACTaGTCCCTGAAGATGACTGAA +
Preference number: 2 (lower is better)
Translates to: FDYLLLLSRFCQLNEKACATTSD*SLKMTE
Trigger: TTCAGTCATCTTCAGGGACCAGTCTGATGTTGTAGC...GCATGCCTTCTCGTTAAGTTGACAAAATCTTGACAGGAGTAAAAGATAATCGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CCA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTTTTCAGCTCACCCTATaGGTACAGACATATCTTGAT +
Preference number: 2 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVFQLTL*VQTYLD
Trigger: ATCAAGATATGTCTGTACCCATAGGGTGAGCTGAAA...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CCA 90 bp AAAATATGCCTAACATTCATAACATGCTATATATACATGGGGTACCTCAGGCACCATGGAAGAGCAGACTaGGGGAAATTTGCTGTCATT +
Preference number: 2 (lower is better)
Translates to: KICLTFITCYIYMGYLRHHGRAD*GKFAVI
Trigger: AATGACAGCAAATTTCCCCCAGTCTGCTCTTCCATG...GTGCCTGAGGTACCCCATGTATATATAGCATGTTATGAATGTTAGGCATATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CCA 90 bp AAAATATGCCTAACATTCATAACATGCTATATATACATGGGGTACCTCAGGCACCCAGAAGGCTCCCAGTaGCTTTCCTATGAATTAAAC +
Preference number: 2 (lower is better)
Translates to: KICLTFITCYIYMGYLRHPEGSQ*LSYELN
Trigger: GTTTAATTCATAGGAAAGCCACTGGGAGCCTTCTGG...GTGCCTGAGGTACCCCATGTATATATAGCATGTTATGAATGTTAGGCATATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CCA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTCACAACCATAGCAACTaGAATTACCACCTGAGTAAA +
Preference number: 2 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVHNHSN*NYHLSK
Trigger: TTTACTCAGGTGGTAATTCCAGTTGCTATGGTTGTG...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 90 bp CAGGAGCATGGAAAATCACTTAGTTCTACCGGGAGTGACAGACGATaGTGGAAAGAAAGAATATTGAATGGAGTTAATGTAACAAAGCAA +
Preference number: 2 (lower is better)
Translates to: QEHGKSLSSTGSDRR*WKERILNGVNVTKQ
Trigger: TTGCTTTGTTACATTAACTCCATTCAATATTCTTTCTTTCCACAATCGTCTGTCACTCCCGGTAGAACTAAGTGATTTTCCATGCTCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR TCA 90 bp AAAATATGCCTAACATTCATAACATGCTATATATACATGGGGTACCTCAGGCACTATTGCCTCGTGTTCTaGATGGATGCTTCAATCACA +
Preference number: 2 (lower is better)
Translates to: KICLTFITCYIYMGYLRHYCLVF*MDASIT
Trigger: TGTGATTGAAGCATCCATTCAGAACACGAGGCAATA...GTGCCTGAGGTACCCCATGTATATATAGCATGTTATGAATGTTAGGCATATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR TCA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAAGGTACAGACATATCTTaGTTCCATCTGAAACCTTCA +
Preference number: 2 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKGTDIS*FHLKPS
Trigger: TGAAGGTTTCAGATGGAATCAAGATATGTCTGTACC...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR TCA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAAGCAAAGAATTCATTTTaGCTAGCCGACTGTCGAAAT +
Preference number: 2 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKAKNSF*LADCRN
Trigger: ATTTCGACAGTCGGCTAGTCAAAATGAATTCTTTGC...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR TCA 90 bp TTCGATTATCTTTTACTCCTGTCAAGATTTTGTCAACTTAACGAGAAGGCATGCAAATGTTCTTCCATTTaGCTGCTACCATCCCCACTA +
Preference number: 2 (lower is better)
Translates to: FDYLLLLSRFCQLNEKACKCSSI*LLPSPL
Trigger: TAGTGGGGATGGTAGCAGTCAAATGGAAGAACATTT...GCATGCCTTCTCGTTAAGTTGACAAAATCTTGACAGGAGTAAAAGATAATCGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR TCA 90 bp TTCGATTATCTTTTACTCCTGTCAAGATTTTGTCAACTTAACGAGAAGGCATGCTTCCTACCCCAATATTaGTCAGTCATCAGGAAGTGT +
Preference number: 2 (lower is better)
Translates to: FDYLLLLSRFCQLNEKACFLPQY*SVIRKC
Trigger: ACACTTCCTGATGACTGATCAATATTGGGGTAGGAA...GCATGCCTTCTCGTTAAGTTGACAAAATCTTGACAGGAGTAAAAGATAATCGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR TCA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTTCTCCTTATTACCAATaGTCCAAATTGTATCCATGC +
Preference number: 2 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVSPYYQ*SKLYPC
Trigger: GCATGGATACAATTTGGATCATTGGTAATAAGGAGA...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR GCA 90 bp AAAATATGCCTAACATTCATAACATGCTATATATACATGGGGTACCTCAGGCACATCACTCGTTCTTTTTaGCTTGGCATTGGGTTCTCA +
Preference number: 2 (lower is better)
Translates to: KICLTFITCYIYMGYLRHITRSF*LGIGFS
Trigger: TGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGAT...GTGCCTGAGGTACCCCATGTATATATAGCATGTTATGAATGTTAGGCATATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR GCA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAATTTTTAAATGCCTGTTaGAATGGCCTTGCTTTGTGC +
Preference number: 2 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKFLNAC*NGLALC
Trigger: GCACAAAGCAAGGCCATTGCAACAGGCATTTAAAAA...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CCA 90 bp TTCGATTATCTTTTACTCCTGTCAAGATTTTGTCAACTTAACGAGAAGGCATGCTCAGGAAGTGTTGCCTaGAGAAAAAGACAGAACCAT +
Preference number: 2 (lower is better)
Translates to: FDYLLLLSRFCQLNEKACSGSVA*RKRQNH
Trigger: ATGGTTCTGTCTTTTTCTCCAGGCAACACTTCCTGA...GCATGCCTTCTCGTTAAGTTGACAAAATCTTGACAGGAGTAAAAGATAATCGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 90 bp GTCAGGGAGCAACATGTAGTAGGATACATAAGTCACACAAAGAGTTaGAATTCTATCTTGCAAGCAATAAAAACGCATGTTTTGCAAGCA +
Preference number: 2 (lower is better)
Translates to: VREQHVVGYISHTKS*NSILQAIKTHVLQA
Trigger: TGCTTGCAAAACATGCGTTTTTATTGCTTGCAAGATAGAATTCAAACTCTTTGTGTGACTTATGTATCCTACTACATGTTGCTCCCTGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 90 bp CCCTGTAGCCAAAATATTTTGCATGGGTGCTATGATGCAAAGGAATaGGTAAATTATAATAGATCAGTGAATTCTGTGACTGCTCACACA +
Preference number: 2 (lower is better)
Translates to: PCSQNILHGCYDAKE*VNYNRSVNSVTAHT
Trigger: TGTGTGAGCAGTCACAGAATTCACTGATCTATTATAATTTACCAATTCCTTTGCATCATAGCACCCATGCAAAATATTTTGGCTACAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 90 bp CAGGGAGAGTATCAAAATTGGAGCACTCCCTGTAGCCAAAATATTTaGCATGGGTGCTATGATGCAAAGGAATTGGTAAATTATAATAGA +
Preference number: 2 (lower is better)
Translates to: QGEYQNWSTPCSQNI*HGCYDAKELVNYNR
Trigger: TCTATTATAATTTACCAATTCCTTTGCATCATAGCACCCATGCAAAATATTTTGGCTACAGGGAGTGCTCCAATTTTGATACTCTCCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR TCA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAACTCATCATAAAATTCTaGAGCAATCACATTGGTCAC +
Preference number: 2 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKLIIKF*SNHIGH
Trigger: GTGACCAATGTGATTGCTTCAGAATTTTATGATGAG...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR TCA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAAGAAACATTCTTCCATTaGCTAGTAAGACTTCTAAGC +
Preference number: 2 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKETFFH*LVRLLS
Trigger: GCTTAGAAGTCTTACTAGTCAATGGAAGAATGTTTC...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR GCA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTTTATCAAATGTAATCTaGGTGTCTTTATGTGCACAC +
Preference number: 2 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVLSNVI*VSLCAH
Trigger: GTGTGCACATAAAGACACGCAGATTACATTTGATAA...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR GCA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAATTCCTACCATGTCTATaGCATGGTGATTCTTATATG +
Preference number: 2 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKFLPCL*HGDSYM
Trigger: CATATAAGAATCACCATGGCATAGACATGGTAGGAA...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR GCA 90 bp AAAATATGCCTAACATTCATAACATGCTATATATACATGGGGTACCTCAGGCACATCTCTTTGCAGAGATaGTCGACTCTAATAGCAAAG +
Preference number: 2 (lower is better)
Translates to: KICLTFITCYIYMGYLRHISLQR*STLIAK
Trigger: CTTTGCTATTAGAGTCGAGCATCTCTGCAAAGAGAT...GTGCCTGAGGTACCCCATGTATATATAGCATGTTATGAATGTTAGGCATATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 90 bp CATGTAGTAGGATACATAAGTCACACAAAGAGTTTGAATTCTATCTaGCAAGCAATAAAAACGCATGTTTTGCAAGCACTGCAGTATCGT +
Preference number: 2 (lower is better)
Translates to: HVVGYISHTKSLNSI*QAIKTHVLQALQYR
Trigger: ACGATACTGCAGTGCTTGCAAAACATGCGTTTTTATTGCTTGCAAGATAGAATTCAAACTCTTTGTGTGACTTATGTATCCTACTACATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 90 bp TGCAAAGAATTCATTTTGACTAGCCGACTGTCGAAATGTTTAACTTaGTGTCTACTTGTGCTTTGTGGACTTTTCATGATGGCGATATTT +
Preference number: 2 (lower is better)
Translates to: CKEFILTSRLSKCLT*CLLVLCGLFMMAIF
Trigger: AAATATCGCCATCATGAAAAGTCCACAAAGCACAAGTAGACACAAAGTTAAACATTTCGACAGTCGGCTAGTCAAAATGAATTCTTTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 90 bp ATGATATCGATTGCAAAAAGTAACCACATGACAGGTGGTAGACTATaGCACCTGCATTGTAGAGACATTAAAATGTTCTTCCATTTGACT +
Preference number: 2 (lower is better)
Translates to: MISIAKSNHMTGGRL*HLHCRDIKMFFHLT
Trigger: AGTCAAATGGAAGAACATTTTAATGTCTCTACAATGCAGGTGCAATAGTCTACCACCTGTCATGTGGTTACTTTTTGCAATCGATATCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 90 bp AATTGGTACTTCTCCAAGTTACATCTGTTCCCTAGCAAAGCTATTTaGTGGGCAGGGTTACAACTTTGCTCAAAACATTTCATTTACATA +
Preference number: 2 (lower is better)
Translates to: NWYFSKLHLFPSKAI*WAGLQLCSKHFIYI
Trigger: TATGTAAATGAAATGTTTTGAGCAAAGTTGTAACCCTGCCCACAAAATAGCTTTGCTAGGGAACAGATGTAACTTGGAGAAGTACCAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR GCA 90 bp TGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTTTATCAAATGTAATCTaGGTGTCTTTATGTGCACAC +
Preference number: 2 (lower is better)
Translates to: CILRKNHSFFLPWHWVLILSNVI*VSLCAH
Trigger: GTGTGCACATAAAGACACGCAGATTACATTTGATAA...AATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
3UTR-3UTR CCA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAAGTGACTGCTCACACATaGTTTAAAATCTATTCATTC +
Preference number: 2 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKVTAHT*FKIYSF
Trigger: GAATGAATAGATTTTAAACCATGTGTGAGCAGTCAC...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 90 bp AATTGTATGAGGTTGTGGATCAGTTGCACATTAGTGACATCCATCTaGAGCAGATATGCACTTTGTCTAAGAAAAAGAAACAACATTCAT +
Preference number: 2 (lower is better)
Translates to: NCMRLWISCTLVTSI*SRYALCLRKRNNIH
Trigger: ATGAATGTTGTTTCTTTTTCTTAGACAAAGTGCATATCTGCTCAAGATGGATGTCACTAATGTGCAACTGATCCACAACCTCATACAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR GCA 90 bp TTCGATTATCTTTTACTCCTGTCAAGATTTTGTCAACTTAACGAGAAGGCATGCTCTACGACATACAGCTaGAGTTATATTTTCTGCTTA +
Preference number: 2 (lower is better)
Translates to: FDYLLLLSRFCQLNEKACSTTYS*SYIFCL
Trigger: TAAGCAGAAAATATAACTGCAGCTGTATGTCGTAGA...GCATGCCTTCTCGTTAAGTTGACAAAATCTTGACAGGAGTAAAAGATAATCGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR GCA 90 bp TTCGATTATCTTTTACTCCTGTCAAGATTTTGTCAACTTAACGAGAAGGCATGCGAAGGATGTAGGTTATaGCTTCTTAGCATTCATATT +
Preference number: 2 (lower is better)
Translates to: FDYLLLLSRFCQLNEKACEGCRL*LLSIHI
Trigger: AATATGAATGCTAAGAAGGCATAACCTACATCCTTC...GCATGCCTTCTCGTTAAGTTGACAAAATCTTGACAGGAGTAAAAGATAATCGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR GCA 72 bp AGGCAGGAGAATGGTGTGAACTCGGAAGGCGGAGCTTaGAGTGAGTCGAGATCACGCCGCTGCACTCTGGCC +
Preference number: 3 (lower is better)
Translates to: RQENGVNSEGGA*SESRSRRCTLA
Trigger: GGCCAGAGTGCAGCGGCGTGATCTCGACTCACTGCAAGCTCCGCCTTCCGAGTTCACACCATTCTCCTGCCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR GCA 72 bp CCAAGAATGCCAACCACACAGGTAAACCTTGCTCTCTaGGGTGGCGTCTGTCCATCGCAATGGCCCGTGCTC +
Preference number: 3 (lower is better)
Translates to: PRMPTTQVNLAL*GGVCPSQWPVL
Trigger: GAGCACGGGCCATTGCGATGGACAGACGCCACCGCAGAGAGCAAGGTTTACCTGTGTGGTTGGCATTCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CCA 72 bp AATGCCAACCACACAGGTAAACCTTGCTCTCTGCGGTaGCGTCTGTCCATCGCAATGGCCCGTGCTCCAAAC +
Preference number: 3 (lower is better)
Translates to: NANHTGKPCSLR*RLSIAMARAPN
Trigger: GTTTGGAGCACGGGCCATTGCGATGGACAGACGCCACCGCAGAGAGCAAGGTTTACCTGTGTGGTTGGCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 72 bp CAGTCTCCGTGTGGGCTCTCTCCAAGGTGGCTTTGGTaGAGGAGACAGTTCGCTTGGACCAGGGTTTCTTTC +
Preference number: 3 (lower is better)
Translates to: QSPCGLSPRWLW*RRQFAWTRVSF
Trigger: GAAAGAAACCCTGGTCCAAGCGAACTGTCTCCTTCACCAAAGCCACCTTGGAGAGAGCCCACACGGAGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR GCA 72 bp AGCACTTCCAAGAATGCCAACCACACAGGTAAACCTTaGTCTCTGCGGTGGCGTCTGTCCATCGCAATGGCC +
Preference number: 3 (lower is better)
Translates to: STSKNANHTGKP*SLRWRLSIAMA
Trigger: GGCCATTGCGATGGACAGACGCCACCGCAGAGAGCAAGGTTTACCTGTGTGGTTGGCATTCTTGGAAGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 72 bp TGCGATGGCCTCTGCAGCCAAGGTCCGGAGATCAAGTaGAGCATCCATTCCCTGTGGACTGCAATATTGCCT +
Preference number: 3 (lower is better)
Translates to: CDGLCSQGPEIK*SIHSLWTAILP
Trigger: AGGCAATATTGCAGTCCACAGGGAATGGATGCTTCACTTGATCTCCGGACCTTGGCTGCAGAGGCCATCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 72 bp CCTGTACTCCCAGCACTTTGGGTGATCGAGGTGGGATaGTTGCTTGCATCTAGGAGTTTGAGACCAGCCTGG +
Preference number: 3 (lower is better)
Translates to: PVLPALWVIEVG*LLASRSLRPAW
Trigger: CCAGGCTGGTCTCAAACTCCTAGATGCAAGCAATCATCCCACCTCGATCACCCAAAGTGCTGGGAGTACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR GCA 72 bp CTCTCTGCGGTGGCGTCTGTCCATCGCAATGGCCCGTaGTCCAAACTCTTCCATTTCTCCTTTCTCTATCCA +
Preference number: 3 (lower is better)
Translates to: LSAVASVHRNGP*SKLFHFSFLYP
Trigger: TGGATAGAGAAAGGAGAAATGGAAGAGTTTGGAGCACGGGCCATTGCGATGGACAGACGCCACCGCAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR GCA 72 bp GGGATACATTCCTCGTATCTGCCTGCGATTGTCCCATaGAGTGGGCTGCTAATGCATCTGACGGTGTTTGAG +
Preference number: 3 (lower is better)
Translates to: GIHSSYLPAIVP*SGLLMHLTVFE
Trigger: CTCAAACACCGTCAGATGCATTAGCAGCCCACTGCATGGGACAATCGCAGGCAGATACGAGGAATGTATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CAA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTAGCACTGTTTTCTGCTTaGCTTTCCCATGCAGCTGGA +
Preference number: 3 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLALFSA*LSHAAG
Trigger: TCCAGCTGCATGGGAAAGCAAAGCAGAAAACAGTGC...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 72 bp GCATACAAGAGGCTTACTTGGGAGGGTTTTTGCAGCTaGCACCTGTGGAAGGCTATGAAGAACCAGGACTGG +
Preference number: 3 (lower is better)
Translates to: AYKRLTWEGFCS*HLWKAMKNQDW
Trigger: CCAGTCCTGGTTCTTCATAGCCTTCCACAGGTGTCAGCTGCAAAAACCCTCCCAAGTAAGCCTCTTGTATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 72 bp GGCTGTAGCAGGTTGGGTTCCCAAGGAAATGGACTCTaGGACAGAGTAGCATACAAGAGGCTTACTTGGGAG +
Preference number: 3 (lower is better)
Translates to: GCSRLGSQGNGL*DRVAYKRLTWE
Trigger: CTCCCAAGTAAGCCTCTTGTATGCTACTCTGTCTCAGAGTCCATTTCCTTGGGAACCCAACCTGCTACAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CCA 72 bp AAGACAGAACCATGGGAAAGCACTCTGTCTTCAGCCTaGGCGAAAGGCAAGAGGCTAACAGCAAGGATCTCT +
Preference number: 3 (lower is better)
Translates to: KTEPWESTLSSA*AKGKRLTARIS
Trigger: AGAGATCCTTGCTGTTAGCCTCTTGCCTTTCGCCCAGGCTGAAGACAGAGTGCTTTCCCATGGTTCTGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CAA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTATACGTAATGGATATCTaGTGCAGCCAAGACTGGCAT +
Preference number: 3 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLYVMDI*CSQDWH
Trigger: ATGCCAGTCTTGGCTGCACAAGATATCCATTACGTA...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 72 bp GGCCACTCTGGTGCTGGAACTAGCAGAATCCTAGGCTaGTTATTTAAATGCAGTGGTGTGGCTCATGCCTGT +
Preference number: 3 (lower is better)
Translates to: GHSGAGTSRILG*LFKCSGVAHAC
Trigger: ACAGGCATGAGCCACACCACTGCATTTAAATAATCAGCCTAGGATTCTGCTAGTTCCAGCACCAGAGTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 72 bp AGTCAGAGTCAGGGAACCAAGAGGAGAAAACACATTTaGGAGGCCACTCTGGTGCTGGAACTAGCAGAATCC +
Preference number: 3 (lower is better)
Translates to: SQSQGTKRRKHI*EATLVLELAES
Trigger: GGATTCTGCTAGTTCCAGCACCAGAGTGGCCTCTCAAATGTGTTTTCTCCTCTTGGTTCCCTGACTCTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR GCA 72 bp CAACTCAAAAAGAGGAGCATCACCAGACACCAGATCTaGAGGCAACTTGATCTTGGGCTTCACAGCCTCAAG +
Preference number: 3 (lower is better)
Translates to: QLKKRSITRHQI*RQLDLGLHSLK
Trigger: CTTGAGGCTGTGAAGCCCAAGATCAAGTTGCCTGCAGATCTGGTGTCTGGTGATGCTCCTCTTTTTGAGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CCA 72 bp GTGATAGATGAGCCTACCCAAGGAATATGGCAGGAATaGTGGGTCCACCCTCAAAGCTACATCACTCCTGAT +
Preference number: 3 (lower is better)
Translates to: VIDEPTQGIWQE*WVHPQSYITPD
Trigger: ATCAGGAGTGATGTAGCTTTGAGGGTGGACCCACCATTCCTGCCATATTCCTTGGGTAGGCTCATCTATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CAA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTAGGGTACAGACATATCTaGATTCCATCTGAAACCTTC +
Preference number: 3 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLGYRHI*IPSETF
Trigger: GAAGGTTTCAGATGGAATCAAGATATGTCTGTACCC...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CAA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTCAGACTGGGGGAAATTaGCTGTCATTGCAGGAGCAT +
Preference number: 3 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLQTGGN*LSLQEH
Trigger: ATGCTCCTGCAATGACAGCAAATTTCCCCCAGTCTG...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CAA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTTACAGTTTAAGCAACTaGCCCAAGGTCACGGGGAAG +
Preference number: 3 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLYSLSN*PKVTGK
Trigger: CTTCCCCGTGACCTTGGGCAAGTTGCTTAAACTGTA...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR GCA 72 bp GCATTCAGCCCCCTAGCAACAAGGGACTCTGGGAAATaGACATGTGGGCTTACAGCTTCTTTAGTACAAGAT +
Preference number: 3 (lower is better)
Translates to: AFSPLATRDSGK*TCGLTASLVQD
Trigger: ATCTTGTACTAAAGAAGCTGTAAGCCCACATGTGCATTTCCCAGAGTCCCTTGTTGCTAGGGGGCTGAATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CAA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTATCTGACAGACCCATCTaGATAATAGCTGTGCAAATT +
Preference number: 3 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLSDRPI*IIAVQI
Trigger: AATTTGCACAGCTATTATCAAGATGGGTCTGTCAGA...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CAA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTTCTGAAGCAATCACATaGGTCACCAAAGCCTTGGCT +
Preference number: 3 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLSEAIT*VTKALA
Trigger: AGCCAAGGCTTTGGTGACCAATGTGATTGCTTCAGA...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CAA 90 bp AAGTGCCAATTAAGTAGGATGAATTTATGTGGGAGGGTGAACACCTGCTCAAGCAGATCTGCAGGCAACTaGATCTTGGGCTTCACAGCC +
Preference number: 3 (lower is better)
Translates to: KCQLSRMNLCGRVNTCSSRSAGN*ILGFTA
Trigger: GGCTGTGAAGCCCAAGATCAAGTTGCCTGCAGATCT...GCTTGAGCAGGTGTTCACCCTCCCACATAAATTCATCCTACTTAATTGGCACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CAA 90 bp CTGGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTTTTTGCCTTGGCATaGGGTTCTCATTGTACAACC +
Preference number: 3 (lower is better)
Translates to: LVLSAFPTQGQIRVTTSILFALA*GSHCTT
Trigger: GGTTGTACAATGAGAACCCAATGCCAAGGCAAAAAG...AATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
3UTR-3UTR CAA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTAAGACCAAGAACTGTTTaGTTCTGTGTGAGTATCTTT +
Preference number: 3 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLRPRTV*FCVSIF
Trigger: AAAGATACTCACACAGAACAAAACAGTTCTTGGTCT...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CAA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATTATTGCCAAGGCAAATaGGCAGGTCAGTGGTTGAAG +
Preference number: 3 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDYCQGK*AGQWLK
Trigger: CTTCAACCACTGACCTGCCAATTTGCCTTGGCAATA...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 72 bp GCCAGTGGAAGTATTAAGTACAAGAGCACATCTGAGTaGTTGCTCTCTGGGAATCAGGAAAACAGCTGCACC +
Preference number: 3 (lower is better)
Translates to: ASGSIKYKSTSE*LLSGNQENSCT
Trigger: GGTGCAGCTGTTTTCCTGATTCCCAGAGAGCAATCACTCAGATGTGCTCTTGTACTTAATACTTCCACTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR GCA 72 bp TCATGGAAGAGCAGACTGGGGGAAATTTGCTGTCATTaGAGGAGCATGGAAAATCACTTAGTTCTACCGGGA +
Preference number: 3 (lower is better)
Translates to: SWKSRLGEICCH*RSMENHLVLPG
Trigger: TCCCGGTAGAACTAAGTGATTTTCCATGCTCCTGCAATGACAGCAAATTTCCCCCAGTCTGCTCTTCCATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR GCA 72 bp GGAGTCACACACATCAACATATCCTCAAAACATCCCTaGAACACAAGCCAGGAATGGAGCTTAGAAGAGCAC +
Preference number: 3 (lower is better)
Translates to: GVTHINISSKHP*NTSQEWSLEEH
Trigger: GTGCTCTTCTAAGCTCCATTCCTGGCTTGTGTTGCAGGGATGTTTTGAGGATATGTTGATGTGTGTGACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CCA 72 bp TTAAGACAAGTGATAGATGAGCCTACCCAAGGAATATaGCAGGAATGGTGGGTCCACCCTCAAAGCTACATC +
Preference number: 3 (lower is better)
Translates to: LRQVIDEPTQGI*QEWWVHPQSYI
Trigger: GATGTAGCTTTGAGGGTGGACCCACCATTCCTGCCATATTCCTTGGGTAGGCTCATCTATCACTTGTCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CCA 72 bp AAACTGAGCCTGCAGCCCATCAGAGCTGATCTGAGCTaGAGTAAGATGTCTAAGACTTCCTACCCCAATATT +
Preference number: 3 (lower is better)
Translates to: KLSLQPIRADLS*SKMSKTSYPNI
Trigger: AATATTGGGGTAGGAAGTCTTAGACATCTTACTCCAGCTCAGATCAGCTCTGATGGGCTGCAGGCTCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CAA 90 bp AAGTGCCAATTAAGTAGGATGAATTTATGTGGGAGGGTGAACACCTGCTCAAGCGGCATTGGGTTCTCATaGTACAACCCTGTACAGTAC +
Preference number: 3 (lower is better)
Translates to: KCQLSRMNLCGRVNTCSSGIGFS*YNPVQY
Trigger: GTACTGTACAGGGTTGTACAATGAGAACCCAATGCC...GCTTGAGCAGGTGTTCACCCTCCCACATAAATTCATCCTACTTAATTGGCACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CAA 90 bp ACGAGCTCTAACTCTAGACTTGGAGGCAGTGAGGTGATCAGAACAAGCTATTTTACAGGTGGTAGACTATaGCACCTGCATTGTAGAGAC +
Preference number: 3 (lower is better)
Translates to: TSSNSRLGGSEVIRTSYFTGGRL*HLHCRD
Trigger: GTCTCTACAATGCAGGTGCAATAGTCTACCACCTGT...AAAATAGCTTGTTCTGATCACCTCACTGCCTCCAAGTCTAGAGTTAGAGCTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CAA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTGCAGGCAACTTGATCTaGGGCTTCACAGCCTCAAGA +
Preference number: 3 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVAGNLI*GFTASR
Trigger: TCTTGAGGCTGTGAAGCCCAAGATCAAGTTGCCTGC...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 72 bp CTCTGTTATCACATAGGACCAGGGAAGCATGAAGAGTaGTTTTTAAGTTCCCAGTCAGAAAGCCAACCCCTG +
Preference number: 3 (lower is better)
Translates to: LCYHIGPGKHEE*FLSSQSESQPL
Trigger: CAGGGGTTGGCTTTCTGACTGGGAACTTAAAAATCACTCTTCATGCTTCCCTGGTCCTATGTGATAACAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 72 bp GCACCATATAGCCACCATCTCCACCTCAACTTCCCTTaGCACTCATGTCTTAGCAAACTTGCTAATCAAACC +
Preference number: 3 (lower is better)
Translates to: APYSHHLHLNFP*HSCLSKLANQT
Trigger: GGTTTGATTAGCAAGTTTGCTAAGACATGAGTGTCAAGGGAAGTTGAGGTGGAGATGGTGGCTATATGGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR GCA 72 bp TGTTCTACTCAAGGGGCTCAAATCTCTTTGCAGAGATaGTCGACTCTAATAGCAAAGACTGAACCTGACCAG +
Preference number: 3 (lower is better)
Translates to: CSTQGAQISLQR*STLIAKTEPDQ
Trigger: CTGGTCAGGTTCAGTCTTTGCTATTAGAGTCGAGCATCTCTGCAAAGAGATTTGAGCCCCTTGAGTAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR GCA 72 bp ACTGTAGTCCTTATCCAGAAATCAGGTCTCTCCTGCTaGTATTCACATCACCTGACTCCACTGAAGATAGTG +
Preference number: 3 (lower is better)
Translates to: TVVLIQKSGLSC*YSHHLTPLKIV
Trigger: CACTATCTTCAGTGGAGTCAGGTGATGTGAATAGCAGCAGGAGAGACCTGATTTCTGGATAAGGACTACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CCA 72 bp TTCCCTGTGGACTGCAATATTGCCTCGTGTTCTGAATaGATGCTTCAATCACAGCATGAAGATGTTGTCCTC +
Preference number: 3 (lower is better)
Translates to: FPVDCNIASCSE*MLQSQHEDVVL
Trigger: GAGGACAACATCTTCATGCTGTGATTGAAGCATCCATTCAGAACACGAGGCAATATTGCAGTCCACAGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CAA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTGAGGAGAAAACACATTaGAGAGGCCACTCTGGTGCT +
Preference number: 3 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVEEKTH*RGHSGA
Trigger: AGCACCAGAGTGGCCTCTCAAATGTGTTTTCTCCTC...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CAA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTTTGGAAGAGAGGTCTTaGACTTGTATCTTAAAGGAC +
Preference number: 3 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLLEERS*TCILKD
Trigger: GTCCTTTAAGATACAAGTCAAAGACCTCTCTTCCAA...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CAA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTTTGATCAAAATAGGTTaGCGGACATGCAGCAAAATC +
Preference number: 3 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLLIKIG*RTCSKI
Trigger: GATTTTGCTGCATGTCCGCAAACCTATTTTGATCAA...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CAA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTGGGGCTCAAATCTCTTaGCAGAGATGCTCGACTCTA +
Preference number: 3 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVGAQIS*QRCSTL
Trigger: TAGAGTCGAGCATCTCTGCAAAGAGATTTGAGCCCC...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 72 bp ACAGATTCCATCACGTGCTTTCTATCCTGGTGCAGGTaGGGCTGTAACAAATGGGAGACGGATTTTAATCTT +
Preference number: 3 (lower is better)
Translates to: TDSITCFLSWCR*GCNKWETDFNL
Trigger: AAGATTAAAATCCGTCTCCCATTTGTTACAGCCTCACCTGCACCAGGATAGAAAGCACGTGATGGAATCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 72 bp ATCAGGTTAACTTTCAGTGAATATACACTAGTCCTATaGGCGACACACACTTGGCAATGCCTTCACCTTGCC +
Preference number: 3 (lower is better)
Translates to: IRLTFSEYTLVL*ATHTWQCLHLA
Trigger: GGCAAGGTGAAGGCATTGCCAAGTGTGTGTCGCTCATAGGACTAGTGTATATTCACTGAAAGTTAACCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 72 bp ACCCACCAGGGCCTGGGCATGGCTCTTAACACTGGATaGGGTACAACAATTTACAGAATATGTTTTCTGTTT +
Preference number: 3 (lower is better)
Translates to: THQGLGMALNTG*GTTIYRICFLF
Trigger: AAACAGAAAACATATTCTGTAAATTGTTGTACCTCATCCAGTGTTAAGAGCCATGCCCAGGCCCTGGTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 72 bp AGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTaGTACTACTTGCCAAATAACTGTCCTGAAACCAAT +
Preference number: 3 (lower is better)
Translates to: RLAADHRNASTH*YYLPNNCPETN
Trigger: ATTGGTTTCAGGACAGTTATTTGGCAAGTAGTATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CCA 72 bp ACCACAGAGCTCTACGCTATTAATCTCCTACGAGATTaGCAAAGTTTTACAAACTGCATGACCATCTGCCTG +
Preference number: 3 (lower is better)
Translates to: TTELYAINLLRD*QSFTNCMTICL
Trigger: CAGGCAGATGGTCATGCAGTTTGTAAAACTTTGCCAATCTCGTAGGAGATTAATAGCGTAGAGCTCTGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CAA 90 bp CAGGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGGGCATTGGGTTCTCATaGTACAACCCTGTACAGTAC +
Preference number: 3 (lower is better)
Translates to: QEFILTASTAKWLMCILRGIGFS*YNPVQY
Trigger: GTACTGTACAGGGTTGTACAATGAGAACCCAATGCC...CCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
3UTR-3UTR CAA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATCCCCATGTCATTGTCTaGATTTTAGATGTCTTACTG +
Preference number: 3 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDPHVIV*ILDVLL
Trigger: CAGTAAGACATCTAAAATCAAGACAATGACATGGGG...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CAA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTGGCCTCGGTAAATATTaGCTGAATGAAATCAAAACT +
Preference number: 3 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLGLGKY*LNEIKT
Trigger: AGTTTTGATTTCATTCAGCAAATATTTACCGAGGCC...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CAA 90 bp ACGAGCTCTAACTCTAGACTTGGAGGCAGTGAGGTGATCAGAACAAGCTATTTTGGGAGTGACAGACGATaGTGGAAAGAAAGAATATTG +
Preference number: 3 (lower is better)
Translates to: TSSNSRLGGSEVIRTSYFGSDRR*WKERIL
Trigger: CAATATTCTTTCTTTCCACAATCGTCTGTCACTCCC...AAAATAGCTTGTTCTGATCACCTCACTGCCTCCAAGTCTAGAGTTAGAGCTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CAA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTCCTCCTAAGGAGACTTaGTTGTTCCTTGCTCATTGC +
Preference number: 3 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVPPKET*LFLAHC
Trigger: GCAATGAGCAAGGAACAACAAAGTCTCCTTAGGAGG...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 72 bp TACCTGTCTTCCGGACCTGGAGGTATAGGAATAGTGTaGAACTATCGGGCCATTTCTTGTTTTACCCATATT +
Preference number: 3 (lower is better)
Translates to: YLSSGPGGIGIV*NYRAISCFTHI
Trigger: AATATGGGTAAAACAAGAAATGGCCCGATAGTTTCACACTATTCCTATACCTCCAGGTCCGGAAGACAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
3UTR TCA 72 bp CCCATGGTCTTGGCCTGTACTCGCAACCTTGACTCTTaGCTAATCATCTCAAAATACATCATAATGACAGCA +
Preference number: 3 (lower is better)
Translates to: PMVLACTRNLDS*LIISKYIIMTA
Trigger: TGCTGTCATTATGATGTATTTTGAGATGATTAGTCAAGAGTCAAGGTTGCGAGTACAGGCCAAGACCATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR GCA 72 bp CCTATGAGCGACACACACTTGGCAATGCCTTCACCTTaGCTTAAACATTATAAATCTTACATTCCAGGGACA +
Preference number: 3 (lower is better)
Translates to: PMSDTHLAMPSP*LKHYKSYIPGT
Trigger: TGTCCCTGGAATGTAAGATTTATAATGTTTAAGGCAAGGTGAAGGCATTGCCAAGTGTGTGTCGCTCATAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR GCA 72 bp GTGGAAGTATTAAGTACAAGAGCACATCTGAGTGATTaGTCTCTGGGAATCAGGAAAACAGCTGCACCATAT +
Preference number: 3 (lower is better)
Translates to: VEVLSTRAHLSD*SLGIRKTAAPY
Trigger: ATATGGTGCAGCTGTTTTCCTGATTCCCAGAGAGCAATCACTCAGATGTGCTCTTGTACTTAATACTTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CCA 72 bp AATCAACCTTATATAACAGAGATGAAGGAGTTCTACTaGCAAAGAAGGCTCATCGGACTTGGGGGTTCAGTA +
Preference number: 3 (lower is better)
Translates to: NQPYITEMKEFY*QRRLIGLGGSV
Trigger: TACTGAACCCCCAAGTCCGATGAGCCTTCTTTGCCAGTAGAACTCCTTCATCTCTGTTATATAAGGTTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CAA 90 bp CAGGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAATCACTCGTTCTTTTaGCCTTGGCATTGGGTTCTC +
Preference number: 3 (lower is better)
Translates to: QEFILTASTAKWLMCILRNHSFF*PWHWVL
Trigger: GAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATT...CCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
3UTR-3UTR CAA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAAAACAGGGAGCACATTTaGTGGGCAGCATCTACACTT +
Preference number: 3 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKNREHI*WAASTL
Trigger: AAGTGTAGATGCTGCCCACAAAATGTGCTCCCTGTT...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 72 bp TGTGTCAGGCACTGTGCAGTATGGTTACTGTTGAGGTaGGTGTTGTTATTAACCCATGTACAGATGAGAAAA +
Preference number: 3 (lower is better)
Translates to: CVRHCAVWLLLR*VLLLTHVQMRK
Trigger: TTTTCTCATCTGTACATGGGTTAATAACAACACTCACCTCAACAGTAACCATACTGCACAGTGCCTGACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 72 bp AGTGTCGGAGATAATCATAGATGCTCCTTGGACCTCTaGCTTGCCTTGAGCCAGTTATTTAAAACTCTGAAT +
Preference number: 3 (lower is better)
Translates to: SVGDNHRCSLDL*LALSQLFKTLN
Trigger: ATTCAGAGTTTTAAATAACTGGCTCAAGGCAAGTCAGAGGTCCAAGGAGCATCTATGATTATCTCCGACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 72 bp GGAGTTCTGCTGCCCAAGCTCAACTTTATGGTTGGTTaGTCAAAACTCATGATTACAGTTCAGTTGCATTAC +
Preference number: 3 (lower is better)
Translates to: GVLLPKLNFMVG*SKLMITVQLHY
Trigger: GTAATGCAACTGAACTGTAATCATGAGTTTTGATCAACCAACCATAAAGTTGAGCTTGGGCAGCAGAACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR GCA 72 bp AGAGATTTCTTCAGGGACATAGTGAGGGAGAAGATTTaGCTGATTTGGCTAAGAACGCATTTCACTATTCTG +
Preference number: 3 (lower is better)
Translates to: RDFFRDIVREKI*LIWLRTHFTIL
Trigger: CAGAATAGTGAAATGCGTTCTTAGCCAAATCAGGCAAATCTTCTCCCTCACTATGTCCCTGAAGAAATCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CCA 72 bp CTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTaGGTTCTCATTGTACAACCCTGTACAGTACTTCAG +
Preference number: 3 (lower is better)
Translates to: LRKNHSFFLPWH*VLIVQPCTVLQ
Trigger: CTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
3UTR CCA 72 bp TGTAGGAGTTCTGCTGCCCAAGCTCAACTTTATGGTTaGTTGATCAAAACTCATGATTACAGTTCAGTTGCA +
Preference number: 3 (lower is better)
Translates to: CRSSAAQAQLYG*LIKTHDYSSVA
Trigger: TGCAACTGAACTGTAATCATGAGTTTTGATCAACCAACCATAAAGTTGAGCTTGGGCAGCAGAACTCCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CAA 90 bp TCAGCTGACATAACAGAACCACTGATCAGTTGTTTTTGTCTAAATAGCAGGAAGCTCATCTCAATTTTCTaGATTCTGTCAGGCCGGGTT +
Preference number: 3 (lower is better)
Translates to: SADITEPLISCFCLNSRKLISIF*ILSGRV
Trigger: AACCCGGCCTGACAGAATCAAGAAAATTGAGATGAG...CTTCCTGCTATTTAGACAAAAACAACTGATCAGTGGTTCTGTTATGTCAGCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CAA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTCTGGTCACGTACTTTTaGTTTTTAACCTCAGGGAGA +
Preference number: 3 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVLVTYF*FLTSGR
Trigger: TCTCCCTGAGGTTAAAAACAAAAAGTACGTGACCAG...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CAA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTCATTGCTACCATCATTaGGGCTCACTAAAAAGTAGC +
Preference number: 3 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVHCYHH*GSLKSS
Trigger: GCTACTTTTTAGTGAGCCCAAATGATGGTAGCAATG...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CAA 90 bp AAAATATGCCTAACATTCATAACATGCTATATATACATGGGGTACCTCAGGCACCTAAAGTGCAAGTTATaGCCAAGGCAAATTGGCAGG +
Preference number: 3 (lower is better)
Translates to: KICLTFITCYIYMGYLRHLKCKL*PRQIGR
Trigger: CCTGCCAATTTGCCTTGGCAATAACTTGCACTTTAG...GTGCCTGAGGTACCCCATGTATATATAGCATGTTATGAATGTTAGGCATATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CAA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTAAAGTTCAGTACTGGTaGATCAAAATAGGTTTGCGG +
Preference number: 3 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVKVQYW*IKIGLR
Trigger: CCGCAAACCTATTTTGATCAACCAGTACTGAACTTT...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 72 bp GACTATGCCTCTTCCTTTTCAATGTCTTCTGTACAGTaGCATTTACCAAGCTCTGAATGGGATCAGATTCTA +
Preference number: 3 (lower is better)
Translates to: DYASSFSMSSVQ*HLPSSEWDQIL
Trigger: TAGAATCTGATCCCATTCAGAGCTTGGTAAATGTCACTGTACAGAAGACATTGAAAAGGAAGAGGCATAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 72 bp GAGCATATGAATAGATACATTTCCTTGAGTGCCTATTaGAAGGATGGACAGATGTGCTATAAATTCTGCGGC +
Preference number: 3 (lower is better)
Translates to: EHMNRYISLSAY*KDGQMCYKFCG
Trigger: GCCGCAGAATTTATAGCACATCTGTCCATCCTTTCAATAGGCACTCAAGGAAATGTATCTATTCATATGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 72 bp ACTGCAGTATCGTACTCAGGCATTCCTTATAGATTATaGTTACCCTTTGTCCTTCAATGTGTTGGAAAGGCT +
Preference number: 3 (lower is better)
Translates to: TAVSYSGIPYRL*LPFVLQCVGKA
Trigger: AGCCTTTCCAACACATTGAAGGACAAAGGGTAATCATAATCTATAAGGAATGCCTGAGTACGATACTGCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 72 bp TGCTCGACTCTAATAGCAAAGACTGAACCTGACCAGTaGGAACTTAGCAAATGTATGGAATATTCACAAAGC +
Preference number: 3 (lower is better)
Translates to: CSTLIAKTEPDQ*ELSKCMEYSQS
Trigger: GCTTTGTGAATATTCCATACATTTGCTAAGTTCTCACTGGTCAGGTTCAGTCTTTGCTATTAGAGTCGAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR GCA 72 bp ATTATAAATCTTACATTCCAGGGACACCTTTACAAATaGCCCTGTTTGTGTGTGTGTGTGTGTGTGTGTACA +
Preference number: 3 (lower is better)
Translates to: IINLTFQGHLYK*PCLCVCVCVCT
Trigger: TGTACACACACACACACACACACACAAACAGGGGCATTTGTAAAGGTGTCCCTGGAATGTAAGATTTATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CCA 72 bp CACCAGGAATTTATTCTGACAGCTTCAACAGCAAAGTaGTTGATGTGTATCCTAAGGAAAAATCACTCGTTC +
Preference number: 3 (lower is better)
Translates to: HQEFILTASTAK*LMCILRKNHSF
Trigger: GAACGAGTGATTTTTCCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCCTGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
3UTR CCA 72 bp TGCATTTTAACTCATACCAAATCTATGAGGAAATTATaGCTACAGTTTAAGCAACTTGCCCAAGGTCACGGG +
Preference number: 3 (lower is better)
Translates to: CILTHTKSMRKL*LQFKQLAQGHG
Trigger: CCCGTGACCTTGGGCAAGTTGCTTAAACTGTAGCCATAATTTCCTCATAGATTTGGTATGAGTTAAAATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CAA 90 bp TTCGATTATCTTTTACTCCTGTCAAGATTTTGTCAACTTAACGAGAAGGCATGCCCTGCTAACATAAGATaGATTAGCCCTCCACAATTG +
Preference number: 3 (lower is better)
Translates to: FDYLLLLSRFCQLNEKACPANIR*ISPPQL
Trigger: CAATTGTGGAGGGCTAATCAATCTTATGTTAGCAGG...GCATGCCTTCTCGTTAAGTTGACAAAATCTTGACAGGAGTAAAAGATAATCGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 72 bp TGCTTTGCTTTCCCATGCAGCTGGAATGGTAAGTCATaGGCAAAACTGCTATTCTCATGTTCTAAAGTAAAA +
Preference number: 3 (lower is better)
Translates to: CFAFPCSWNGKS*AKLLFSCSKVK
Trigger: TTTTACTTTAGAACATGAGAATAGCAGTTTTGCTCATGACTTACCATTCCAGCTGCATGGGAAAGCAAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 72 bp TTGTTGTGTCCTCTTGGAAGAGAAACATTCTTCCATTaGCTAGTAAGACTTCTAAGCCATCATATCCCAACA +
Preference number: 3 (lower is better)
Translates to: LLCPLGRETFFH*LVRLLSHHIPT
Trigger: TGTTGGGATATGATGGCTTAGAAGTCTTACTAGTCAATGGAAGAATGTTTCTCTTCCAAGAGGACACAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 72 bp TACTGTACATCAATACATATGAACGTAGTAAGTATTTaGCAAAGCAAAGAGGATAGTGTGACAGGTGAGGGG +
Preference number: 3 (lower is better)
Translates to: YCTSIHMNVVSI*QSKEDSVTGEG
Trigger: CCCCTCACCTGTCACACTATCCTCTTTGCTTTGTCAAATACTTACTACGTTCATATGTATTGATGTACAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 72 bp CTAGATACACTGTGTGTGTTTAGGAACTCTCATACCTaGCACCAGATGACATTAAAAGAGTGTTCATTGAAG +
Preference number: 3 (lower is better)
Translates to: LDTLCVFRNSHT*HQMTLKECSLK
Trigger: CTTCAATGAACACTCTTTTAATGTCATCTGGTGTCAGGTATGAGAGTTCCTAAACACACACAGTGTATCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 72 bp ATGGCCATTATCCCAGCCATTGCATATCAGCTGCCTTaGGTTAAAACCTTAATATTCCCTTATTTGTTCTCA +
Preference number: 3 (lower is better)
Translates to: MAIIPAIAYQLP*VKTLIFPYLFS
Trigger: TGAGAACAAATAAGGGAATATTAAGGTTTTAACTCAAGGCAGCTGATATGCAATGGCTGGGATAATGGCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR GCA 72 bp ATTAATCTCCTACGAGATTGGCAAAGTTTTACAAACTaGATGACCATCTGCCTGAAACATTTTATGCACCGT +
Preference number: 3 (lower is better)
Translates to: INLLRDWQSFTN*MTICLKHFMHR
Trigger: ACGGTGCATAAAATGTTTCAGGCAGATGGTCATGCAGTTTGTAAAACTTTGCCAATCTCGTAGGAGATTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR GCA 72 bp TTTTCCACAGTCCATTATAGTATTTTAAAGGCTGGTTaGTTCAGGCAACTTGTGGTGAATGATAACAGTGAC +
Preference number: 3 (lower is better)
Translates to: FSTVHYSILKAG*FRQLVVNDNSD
Trigger: GTCACTGTTATCATTCACCACAAGTTGCCTGAAGCAACCAGCCTTTAAAATACTATAATGGACTGTGGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CCA 72 bp TCCAAGTTACATCTGTTCCCTAGCAAAGCTATTTTGTaGGCAGGGTTACAACTTTGCTCAAAACATTTCATT +
Preference number: 3 (lower is better)
Translates to: SKLHLFPSKAIL*AGLQLCSKHFI
Trigger: AATGAAATGTTTTGAGCAAAGTTGTAACCCTGCCCACAAAATAGCTTTGCTAGGGAACAGATGTAACTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CAA 90 bp AAAATATGCCTAACATTCATAACATGCTATATATACATGGGGTACCTCAGGCACCTATCGGGCCATTTCTaGTTTTACCCATATTATTCC +
Preference number: 3 (lower is better)
Translates to: KICLTFITCYIYMGYLRHLSGHF*FYPYYS
Trigger: GGAATAATATGGGTAAAACAAGAAATGGCCCGATAG...GTGCCTGAGGTACCCCATGTATATATAGCATGTTATGAATGTTAGGCATATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CAA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAATCCCCTAAGGATATATaGAGGTTTTCGTCTAGTTTA +
Preference number: 3 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKSPKDI*RFSSSL
Trigger: TAAACTAGACGAAAACCTCAATATATCCTTAGGGGA...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 72 bp CATATTTTGACTTTAGAAAGAGCATCAGGCAAGGTTTaGCAAGACCAAGAACAAGACCAAGAACTGTTTTGT +
Preference number: 3 (lower is better)
Translates to: HILTLERASGKV*QDQEQDQELFC
Trigger: ACAAAACAGTTCTTGGTCTTGTTCTTGGTCTTGTCAAACCTTGCCTGATGCTCTTTCTAAAGTCAAAATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 72 bp TCAGTGGTTGAAGCAGGATTCCAAAGTAAGTCAGCTTaGTTTCAAACTGATTTCTTAATAACTACCACTCTC +
Preference number: 3 (lower is better)
Translates to: SVVEAGFQSKSA*FQTDFLITTTL
Trigger: GAGAGTGGTAGTTATTAAGAAATCAGTTTGAAATCAAGCTGACTTACTTTGGAATCCTGCTTCAACCACTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 72 bp ACAGCTTATGAAAGAACAGGTAATGATACCTTAATCTaGGTCCCAAGGACCACTTTCCAATTACACAATTAC +
Preference number: 3 (lower is better)
Translates to: TAYERTGNDTLI*VPRTTFQLHNY
Trigger: GTAATTGTGTAATTGGAAAGTGGTCCTTGGGACTCAGATTAAGGTATCATTACCTGTTCTTTCATAAGCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 72 bp ATGTGGCATGAATATTCTCATAGGTTCTGCCACTTATaGACAATCCTTAACACGTATTTCTTCCCTAAGTCT +
Preference number: 3 (lower is better)
Translates to: MWHEYSHRFCHL*TILNTYFFPKS
Trigger: AGACTTAGGGAAGAAATACGTGTTAAGGATTGTTCATAAGTGGCAGAACCTATGAGAATATTCATGCCACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 72 bp ATGCACATGTGGGCTTACAGCTTCTTTAGTACAAGATaGCTCCTAGAAGGATGTGAAAATAGATGTCAAATA +
Preference number: 3 (lower is better)
Translates to: MHMWAYSFFSTR*LLEGCENRCQI
Trigger: TATTTGACATCTATTTTCACATCCTTCTAGGAGTCATCTTGTACTAAAGAAGCTGTAAGCCCACATGTGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CCA 72 bp GTCGAAATGTTTAACTTTGTGTCTACTTGTGCTTTGTaGACTTTTCATGATGGCGATATTTTGTTGCAAGGT +
Preference number: 3 (lower is better)
Translates to: VEMFNFVSTCAL*TFHDGDILLQG
Trigger: ACCTTGCAACAAAATATCGCCATCATGAAAAGTCCACAAAGCACAAGTAGACACAAAGTTAAACATTTCGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR-3UTR CAA 90 bp AAAATATGCCTAACATTCATAACATGCTATATATACATGGGGTACCTCAGGCACGTACAGATGAGAAAATaGAAGCATATACATGCCCAA +
Preference number: 3 (lower is better)
Translates to: KICLTFITCYIYMGYLRHVQMRK*KHIHAQ
Trigger: TTGGGCATGTATATGCTTCAATTTTCTCATCTGTAC...GTGCCTGAGGTACCCCATGTATATATAGCATGTTATGAATGTTAGGCATATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 72 bp AACTCCAAATTCACAGCTTTAGGGATTACTAAGTATTaGATCCAAAGTATCGAAGCAGCGCATCTAAAACTA +
Preference number: 3 (lower is better)
Translates to: NSKFTALGITKY*IQSIEAAHLKL
Trigger: TAGTTTTAGATGCGCTGCTTCGATACTTTGGATTCAATACTTAGTAATCCCTAAAGCTGTGAATTTGGAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 72 bp AACACGTATTTCTTCCCTAAGTCTCCTTATTACCAATaGTCCAAATTGTATCCATGCTTAGTGAAACCTTTG +
Preference number: 3 (lower is better)
Translates to: NTYFFPKSPYYQ*SKLYPCLVKPL
Trigger: CAAAGGTTTCACTAAGCATGGATACAATTTGGATCATTGGTAATAAGGAGACTTAGGGAAGAAATACGTGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 72 bp TTCAAGCTATTTCAACATGATACTAACAAAGTCAGCTaGCATAACAGAACCACTGATCAGTTGTTTTTGTCT +
Preference number: 3 (lower is better)
Translates to: FKLFQHDTNKVS*HNRTTDQLFLS
Trigger: AGACAAAAACAACTGATCAGTGGTTCTGTTATGTCAGCTGACTTTGTTAGTATCATGTTGAAATAGCTTGAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 72 bp AGAAAGGAAAATAATGCTAATACAGACCGTAGTGAGTaGATTGCTTTGAGACTATTAACTACCACAAAGTGT +
Preference number: 3 (lower is better)
Translates to: RKENNANTDRSE*IALRLLTTTKC
Trigger: ACACTTTGTGGTAGTTAATAGTCTCAAAGCAATTCACTCACTACGGTCTGTATTAGCATTATTTTCCTTTCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR TCA 72 bp CATCCATATAATAGATCACCTTATCTACTGAATCTCTaGAAGATTCCTCAACTAGGAAGATCTTCTGAAAAG +
Preference number: 3 (lower is better)
Translates to: HPYNRSPYLLNL*KIPQLGRSSEK
Trigger: CTTTTCAGAAGATCTTCCTAGTTGAGGAATCTTTCAGAGATTCAGTAGATAAGGTGATCTATTATATGGATG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR GCA 72 bp ATCATGAGAAAACCTTGTTACAGAATAGAGACTGCCTaGTCTGGAAATTCTTTTGGTTTCAGTTTAGTTTTT +
Preference number: 3 (lower is better)
Translates to: IMRKPCYRIETA*SGNSFGFSLVF
Trigger: AAAAACTAAACTGAAACCAAAAGAATTTCCAGAGCAGGCAGTCTCTATTCTGTAACAAGGTTTTCTCATGAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR GCA 72 bp AGGTATATTTTTACATATATGCTTCTGCAATCAGACTaGAGAATACTGATGCTCTCCCTGTCAATCTTAAAT +
Preference number: 3 (lower is better)
Translates to: RYIFTYMLLQSD*RILMLSLSILN
Trigger: ATTTAAGATTGACAGGGAGAGCATCAGTATTCTGCAGTCTGATTGCAGAAGCATATATGTAAAAATATACCT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CCA 72 bp TTAAGTAGAGACCATATCTTCCACAACCATAGCAACTaGAATTACCACCTGAGTAAACTTACATTAATTGTA +
Preference number: 3 (lower is better)
Translates to: LSRDHIFHNHSN*NYHLSKLTLIV
Trigger: TACAATTAATGTAAGTTTACTCAGGTGGTAATTCCAGTTGCTATGGTTGTGGAAGATATGGTCTCTACTTAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp GAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGGGCCTCTGGCTCCGCCTCGCCGCTGCTaGGCACCAGGGACGGAGGAC +
Preference number: 4 (lower is better)
Translates to: ECVLKSLIVRLDNAGPLAPPRRC*APGTED
Trigger: GTCCTCCGTCCCTGGTGCCCAGCAGCGGCGAGGCGG...AGCCAGAGGCCCAGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp GAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGGGCCTCTGGCTGGAAAGGGAAGACGCTaGCGCGGCAGCAGCGGGGAT +
Preference number: 4 (lower is better)
Translates to: ECVLKSLIVRLDNAGPLAGKGRR*RGSSGD
Trigger: ATCCCCGCTGCTGCCGCGCCAGCGTCTTCCCTTTCC...AGCCAGAGGCCCAGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTAGGGGAGCCCATGCTGTaGGACGTCGTCTGCTCATGG +
Preference number: 4 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLGEPML*DVVCSW
Trigger: CCATGAGCAGACGACGTCCCACAGCATGGGCTCCCC...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTAGAGAGGGTGGGAGGCTaGGTGGTCGGAGAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLERVGG*VVGEAV
Trigger: TACAGCTTCTCCGACCACTCAGCCTCCCACCCTCTC...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp ACGAGCTCTAACTCTAGACTTGGAGGCAGTGAGGTGATCAGAACAAGCTATTTTGATCCCAGGGCTCGGTaGACACGGCGGCGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: TSSNSRLGGSEVIRTSYFDPRAR*TRRRER
Trigger: CCGCTCCCGCCGCCGTGTCCACCGAGCCCTGGGATC...AAAATAGCTTGTTCTGATCACCTCACTGCCTCCAAGTCTAGAGTTAGAGCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTAGGTCCGGAGATCAAGTaGAGCATCCATTCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLGPEIK*SIHSLW
Trigger: CCACAGGGAATGGATGCTTCACTTGATCTCCGGACC...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp CCTGTCTTCCGGACCTGGAGGTATAGGAATAGTGTGAAACTATCGGGCCATTTCGAAAGGGGGAGCCCATaGTGTGGGACGTCGTCTGCT +
Preference number: 4 (lower is better)
Translates to: PVFRTWRYRNSVKLSGHFERGSP*CGTSSA
Trigger: AGCAGACGACGTCCCACAGCATGGGCTCCCCCTTTC...GAAATGGCCCGATAGTTTCACACTATTCCTATACCTCCAGGTCCGGAAGACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATGGAAAGGGAAGACGCTaGCGCGGCAGCAGCGGGGAT +
Preference number: 4 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDGKGRR*RGSSGD
Trigger: ATCCCCGCTGCTGCCGCGCCAGCGTCTTCCCTTTCC...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTAGGCTGGGCCACTTTGTaGTCTGTAGGCCCATTTCTG +
Preference number: 4 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLGWATL*SVGPFL
Trigger: CAGAAATGGGCCTACAGACCACAAAGTGGCCCAGCC...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp GAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGGGCCTCTGGCTGGCCGGGGGTCGTGGTaGGACAGGACAAAAGATTCA +
Preference number: 4 (lower is better)
Translates to: ECVLKSLIVRLDNAGPLAGRGSW*DRTKDS
Trigger: TGAATCTTTTGTCCTGTCCCACCACGACCCCCGGCC...AGCCAGAGGCCCAGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp CCTGTCTTCCGGACCTGGAGGTATAGGAATAGTGTGAAACTATCGGGCCATTTCAGCTGTACTTGGGGCTaGGGTGAAGAGAGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: PVFRTWRYRNSVKLSGHFSCTWG*GEERQA
Trigger: GGCCTGCCTCTCTTCACCCCAGCCCCAAGTACAGCT...GAAATGGCCCGATAGTTTCACACTATTCCTATACCTCCAGGTCCGGAAGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp ATGTGCACACACGAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTTATGGGCACCGTGCCTaGTGGCCTCTTGGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: MCTHECVLKSLIVRLDNAYGHRA*WPLGPK
Trigger: CTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATA...AGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTCGTGTGTGCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp GCAAAGTGGTTGATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGATGCCGCCTCGCCGCTaGTGGGCACCAGGGACGGAG +
Preference number: 4 (lower is better)
Translates to: AKWLMCILRKNHSFFLPWMPPRR*WAPGTE
Trigger: CTCCGTCCCTGGTGCCCAGCAGCGGCGAGGCGGCAT...CCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACATCAACCACTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR GCA 90 bp ATGTGCACACACGAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTCGCCGAGGTCCCTCCTaGCCATCGTTGAGAACTGCC +
Preference number: 4 (lower is better)
Translates to: MCTHECVLKSLIVRLDNARRGPS*PSLRTA
Trigger: GGCAGTTCTCAACGATGGGCAGGAGGGACCTCGGCG...AGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTCGTGTGTGCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR GCA 90 bp GAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGGGCCTCTGGCTGGCTGGACGCTGTGTTaGTGCCGTTGTTCAGATAGG +
Preference number: 4 (lower is better)
Translates to: ECVLKSLIVRLDNAGPLAGWTLC*CRCSDR
Trigger: CCTATCTGAACAACGGCAGCAACACAGCGTCCAGCC...AGCCAGAGGCCCAGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR GCA 90 bp GAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGGGCCTCTGGCTCACACAGGTAAACCTTaGTCTCTGCGGTGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: ECVLKSLIVRLDNAGPLAHTGKP*SLRWRL
Trigger: CAGACGCCACCGCAGAGAGCAAGGTTTACCTGTGTG...AGCCAGAGGCCCAGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp CCTGTCTTCCGGACCTGGAGGTATAGGAATAGTGTGAAACTATCGGGCCATTTCGACGCTCCAAGCTCGTaGGATTCTGGAAGGCCATGT +
Preference number: 4 (lower is better)
Translates to: PVFRTWRYRNSVKLSGHFDAPSS*DSGRPC
Trigger: ACATGGCCTTCCAGAATCTCACGAGCTTGGAGCGTC...GAAATGGCCCGATAGTTTCACACTATTCCTATACCTCCAGGTCCGGAAGACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGCCGCCTCGCCGCTGCTaGGCACCAGGGACGGAGGAC +
Preference number: 4 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHEPPRRC*APGTED
Trigger: GTCCTCCGTCCCTGGTGCCCAGCAGCGGCGAGGCGG...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp GAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGGGCCTCTGGCTCAACACAAGCCCAAGTaGGCAGGCAGAACTCTCTTC +
Preference number: 4 (lower is better)
Translates to: ECVLKSLIVRLDNAGPLAQHKPK*AGRTLF
Trigger: GAAGAGAGTTCTGCCTGCCCACTTGGGCTTGTGTTG...AGCCAGAGGCCCAGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp CTGGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTGGCAGGCCAGGAGTTTaGACACCTGTGAGTAGAGCC +
Preference number: 4 (lower is better)
Translates to: LVLSAFPTQGQIRVTTSIGRPGV*TPVSRA
Trigger: GGCTCTACTCACAGGTGTCCAAACTCCTGGCCTGCC...AATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp CTGGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCGGCGATACCCTTGTTaGTCAGGAGGTTCCCGTCCA +
Preference number: 4 (lower is better)
Translates to: LVLSAFPTQGQIRVTTSIRRYPC*SGGSRP
Trigger: TGGACGGGAACCTCCTGACCAACAAGGGTATCGCCG...AATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp GGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTCGGCGATACCCTTGTTaGTCAGGAGGTTCCCGTCCA +
Preference number: 4 (lower is better)
Translates to: GAFSISHTGSNQGNYLHSRRYPC*SGGSRP
Trigger: TGGACGGGAACCTCCTGACCAACAAGGGTATCGCCG...AGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp GGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTGGCCGGGGGTCGTGGTaGGACAGGACAAAAGATTCA +
Preference number: 4 (lower is better)
Translates to: GAFSISHTGSNQGNYLHSGRGSW*DRTKDS
Trigger: TGAATCTTTTGTCCTGTCCCACCACGACCCCCGGCC...AGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp ATGTGCACACACGAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGCAGGCCGGGGGTCGTaGTGGGACAGGACAAAAGAT +
Preference number: 4 (lower is better)
Translates to: MCTHECVLKSLIVRLDNAAGRGS*WDRTKD
Trigger: ATCTTTTGTCCTGTCCCACCACGACCCCCGGCCTGC...AGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTCGTGTGTGCACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp CCTGTCTTCCGGACCTGGAGGTATAGGAATAGTGTGAAACTATCGGGCCATTTCACCAGGGCCTGGGCATaGCTCTTAACACTGGATGAG +
Preference number: 4 (lower is better)
Translates to: PVFRTWRYRNSVKLSGHFTRAWA*LLTLDE
Trigger: CTCATCCAGTGTTAAGAGCCATGCCCAGGCCCTGGT...GAAATGGCCCGATAGTTTCACACTATTCCTATACCTCCAGGTCCGGAAGACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp CCTGTCTTCCGGACCTGGAGGTATAGGAATAGTGTGAAACTATCGGGCCATTTCGATCCCAAGAGGCACTaGGGTCAAGCTTCGCTCATT +
Preference number: 4 (lower is better)
Translates to: PVFRTWRYRNSVKLSGHFDPKRH*GQASLI
Trigger: AATGAGCGAAGCTTGACCTCAGTGCCTCTTGGGATC...GAAATGGCCCGATAGTTTCACACTATTCCTATACCTCCAGGTCCGGAAGACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTACCATTTTCACCCATGTaGGTTTGTATGCCATCACGG +
Preference number: 4 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLPFSPM*VCMPSR
Trigger: CCGTGATGGCATACAAACTCACATGGGTGAAAATGG...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATGCATCTGACGGTGTTTaGGGGTGGCCCAGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDASDGV*GWPRVS
Trigger: AGAGACTCTGGGCCACCCTCAAACACCGTCAGATGC...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTACCATGTTCAATGACTTaGCGTAGAGCCTCCGGATAT +
Preference number: 4 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLPCSMT*RRASGY
Trigger: ATATCCGGAGGCTCTACGTCAAGTCATTGAACATGG...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp TTCGATTATCTTTTACTCCTGTCAAGATTTTGTCAACTTAACGAGAAGGCATGCATGCCGCCTCGCCGCTaGTGGGCACCAGGGACGGAG +
Preference number: 4 (lower is better)
Translates to: FDYLLLLSRFCQLNEKACMPPRR*WAPGTE
Trigger: CTCCGTCCCTGGTGCCCAGCAGCGGCGAGGCGGCAT...GCATGCCTTCTCGTTAAGTTGACAAAATCTTGACAGGAGTAAAAGATAATCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp GGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTCCAGGTCTGGCACGCTaGTGTTGCAGTATCGCATGT +
Preference number: 4 (lower is better)
Translates to: GAFSISHTGSNQGNYLHSPGLAR*CCSIAC
Trigger: ACATGCGATACTGCAACAGCAGCGTGCCAGACCTGG...AGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR GCA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTACAAGAGTGTGTGCCCTaGCAGCTTTTTCAGAGACAT +
Preference number: 4 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLQECVP*QLFQRH
Trigger: ATGTCTCTGAAAAAGCTGGCAGGGCACACACTCTTG...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp ATGTGCACACACGAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGGCAGGCCAGGAGTTTaGACACCTGTGAGTAGAGCC +
Preference number: 4 (lower is better)
Translates to: MCTHECVLKSLIVRLDNAGRPGV*TPVSRA
Trigger: GGCTCTACTCACAGGTGTCCAAACTCCTGGCCTGCC...AGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTCGTGTGTGCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp CCTGTCTTCCGGACCTGGAGGTATAGGAATAGTGTGAAACTATCGGGCCATTTCACTTGTTCAGGACCTTaGCACATGAAACCCCGCACG +
Preference number: 4 (lower is better)
Translates to: PVFRTWRYRNSVKLSGHFTCSGP*HMKPRT
Trigger: CGTGCGGGGTTTCATGTGCCAAGGTCCTGAACAAGT...GAAATGGCCCGATAGTTTCACACTATTCCTATACCTCCAGGTCCGGAAGACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp GGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTATAACGCTGGGCCTCTaGCTGTCACGTATGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GAFSISHTGSNQGNYLHSITLGL*LSRMAV
Trigger: CACTGCCATACGTGACAGCCAGAGGCCCAGCGTTAT...AGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp CCTGTCTTCCGGACCTGGAGGTATAGGAATAGTGTGAAACTATCGGGCCATTTCGAACCGGCTTCCTCCTaGTGCTTTCAGCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: PVFRTWRYRNSVKLSGHFEPASS*CFQHFP
Trigger: TGGGAAATGCTGAAAGCACCAGGAGGAAGCCGGTTC...GAAATGGCCCGATAGTTTCACACTATTCCTATACCTCCAGGTCCGGAAGACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp GAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGGGCCTCTGGCTGATTGTCCCATGCAGTaGGCTGCTAATGCATCTGAC +
Preference number: 4 (lower is better)
Translates to: ECVLKSLIVRLDNAGPLADCPMQ*AANASD
Trigger: GTCAGATGCATTAGCAGCCCACTGCATGGGACAATC...AGCCAGAGGCCCAGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp GGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTCTGCATTGCCCAGGCTaGTCTGGAAATCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: GAFSISHTGSNQGNYLHSLHCPG*SGNPDL
Trigger: GAGGTCAGGATTTCCAGACCAGCCTGGGCAATGCAG...AGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTACTGAGGCAGGAGAATaGTGTGAACTCGGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLTEAGE*CELGRR
Trigger: CCGCCTTCCGAGTTCACACCATTCTCCTGCCTCAGT...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp TTGCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTATTTCTGCTAGTGGGTaGGGGGCAGTGGCTCACGCC +
Preference number: 4 (lower is better)
Translates to: LPWHWVLIVQPCTVLQQLISASG*GAVAHA
Trigger: GGCGTGAGCCACTGCCCCCCACCCACTAGCAGAAAT...AAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTCTTGGTGGAGTCCTATaGGCAGTTAGGGTGGCAGAC +
Preference number: 4 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLLGGVL*AVRVAD
Trigger: GTCTGCCACCCTAACTGCCCATAGGACTCCACCAAG...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp AAGTGCCAATTAAGTAGGATGAATTTATGTGGGAGGGTGAACACCTGCTCAAGCTGCCAAACGCGCAAGTaGCGGCGACAGGTTTCGAAC +
Preference number: 4 (lower is better)
Translates to: KCQLSRMNLCGRVNTCSSCQTRK*RRQVSN
Trigger: GTTCGAAACCTGTCGCCGTCACTTGCGCGTTTGGCA...GCTTGAGCAGGTGTTCACCCTCCCACATAAATTCATCCTACTTAATTGGCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp GGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTCACACTGGCAACAGGTaGTGGCAAGTTATCAGCCGT +
Preference number: 4 (lower is better)
Translates to: GAFSISHTGSNQGNYLHSHTGNR*WQVISR
Trigger: ACGGCTGATAACTTGCCATCACCTGTTGCCAGTGTG...AGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp CCTGTCTTCCGGACCTGGAGGTATAGGAATAGTGTGAAACTATCGGGCCATTTCTGGATGGGGTTCTGTTaGAGTCCAGAACTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: PVFRTWRYRNSVKLSGHFWMGFC*SPELQL
Trigger: TAGCTGGAGTTCTGGACTTCAACAGAACCCCATCCA...GAAATGGCCCGATAGTTTCACACTATTCCTATACCTCCAGGTCCGGAAGACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp CTGGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCCTGCAAATAGAGCCTaGTCAGATGCGTACCTGGGA +
Preference number: 4 (lower is better)
Translates to: LVLSAFPTQGQIRVTTSIPANRA*SDAYLG
Trigger: TCCCAGGTACGCATCTGATCAGGCTCTATTTGCAGG...AATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp GAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGGGCCTCTGGCTCCGCACGTTGAGAGATaGAGGGATATATTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: ECVLKSLIVRLDNAGPLAPHVER*RDIFEP
Trigger: TGGCTCAAATATATCCCTTCATCTCTCAACGTGCGG...AGCCAGAGGCCCAGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp GGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTCTGACTATGCGCTCCTaGACGATGCCCCCTACTAAA +
Preference number: 4 (lower is better)
Translates to: GAFSISHTGSNQGNYLHSLTMRS*TMPPTK
Trigger: TTTAGTAGGGGGCATCGTTCAGGAGCGCATAGTCAG...AGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp ATGTGCACACACGAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGTTGCTTCTCACCGCTaGCTATGCGCTCCTGAACGA +
Preference number: 4 (lower is better)
Translates to: MCTHECVLKSLIVRLDNAVASHR*LCAPER
Trigger: TCGTTCAGGAGCGCATAGTCAGCGGTGAGAAGCAAC...AGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTCGTGTGTGCACAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp ACGAGCTCTAACTCTAGACTTGGAGGCAGTGAGGTGATCAGAACAAGCTATTTTTCTCCTGGGCTCAAGTaGCCCTCCTGCTTCAACCTC +
Preference number: 4 (lower is better)
Translates to: TSSNSRLGGSEVIRTSYFSPGLK*PSCFNL
Trigger: GAGGTTGAAGCAGGAGGGTCACTTGAGCCCAGGAGA...AAAATAGCTTGTTCTGATCACCTCACTGCCTCCAAGTCTAGAGTTAGAGCTCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp CCTGTCTTCCGGACCTGGAGGTATAGGAATAGTGTGAAACTATCGGGCCATTTCAAGCTACATCACTCCTaGTCACATGAGAAGGCACCC +
Preference number: 4 (lower is better)
Translates to: PVFRTWRYRNSVKLSGHFKLHHS*SHEKAP
Trigger: GGGTGCCTTCTCATGTGATCAGGAGTGATGTAGCTT...GAAATGGCCCGATAGTTTCACACTATTCCTATACCTCCAGGTCCGGAAGACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp TTGCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTGCAGCCCCTTTTACCTaGCGGCTGCGTCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: LPWHWVLIVQPCTVLQQLAAPFT*RLRLLL
Trigger: AAGGAGAAGACGCAGCCGTCAGGTAAAAGGGGCTGC...AAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554746.1
CDS-3UTR GCA 90 bp CCTGTCTTCCGGACCTGGAGGTATAGGAATAGTGTGAAACTATCGGGCCATTTCCTTATCAGCCTGTGTTaGCCTCTTTGCTGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: PVFRTWRYRNSVKLSGHFLISLC*PLCCCP
Trigger: AGGACAGCAGCAAAGAGGGCAACACAGGCTGATAAG...GAAATGGCCCGATAGTTTCACACTATTCCTATACCTCCAGGTCCGGAAGACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR GCA 90 bp GAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGGGCCTCTGGCTATTCGTCCAGTTGGTTaGCATACAGGTAGACCGTGT +
Preference number: 4 (lower is better)
Translates to: ECVLKSLIVRLDNAGPLAIRPVG*HTGRPC
Trigger: ACACGGTCTACCTGTATGGCAACCAACTGGACGAAT...AGCCAGAGGCCCAGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR GCA 90 bp GGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTACCAGGCTCAGGTGTTaGTTCTCACCGCTGACTATG +
Preference number: 4 (lower is better)
Translates to: GAFSISHTGSNQGNYLHSTRLRC*FSPLTM
Trigger: CATAGTCAGCGGTGAGAAGCAACACCTGAGCCTGGT...AGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp CCTGTCTTCCGGACCTGGAGGTATAGGAATAGTGTGAAACTATCGGGCCATTTCCTTCCACCCCCACTGTaGATATGGAGTTGTCATCCA +
Preference number: 4 (lower is better)
Translates to: PVFRTWRYRNSVKLSGHFLPPPL*IWSCHP
Trigger: TGGATGACAACTCCATATCCACAGTGGGGGTGGAAG...GAAATGGCCCGATAGTTTCACACTATTCCTATACCTCCAGGTCCGGAAGACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp GCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTGATCAGATGCGTACCTaGGAGATCGGGAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: ALALGSHCTTLYSTSATFDQMRT*EIGRRV
Trigger: CACCCTCCTCCCGATCTCCCAGGTACGCATCTGATC...AAAAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp ACGAGCTCTAACTCTAGACTTGGAGGCAGTGAGGTGATCAGAACAAGCTATTTTCGGAGAAGCTGTACTTaGGGCTGGGGTGAAGAGAGG +
Preference number: 4 (lower is better)
Translates to: TSSNSRLGGSEVIRTSYFRRSCT*GWGEER
Trigger: CCTCTCTTCACCCCAGCCCCAAGTACAGCTTCTCCG...AAAATAGCTTGTTCTGATCACCTCACTGCCTCCAAGTCTAGAGTTAGAGCTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp GCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTGGGTGGGAGGCTGAGTaGTCGGAGAAGCTGTACTTG +
Preference number: 4 (lower is better)
Translates to: ALALGSHCTTLYSTSATFGWEAE*SEKLYL
Trigger: CAAGTACAGCTTCTCCGACCACTCAGCCTCCCACCC...AAAAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp GGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTCGATGTGGTAGGAGTTaGAGGCGTGTAGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: GAFSISHTGSNQGNYLHSRCGRS*RRVASA
Trigger: AGCAGAAGCTACACGCCTCCAACTCCTACCACATCG...AGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTAGGAGGCATGGGTGGTaGCCTCTGAACAAATGGTGT +
Preference number: 4 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLRRHGW*PLNKWC
Trigger: ACACCATTTGTTCAGAGGCCACCACCCATGCCTCCT...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp AAGTGCCAATTAAGTAGGATGAATTTATGTGGGAGGGTGAACACCTGCTCAAGCGCAGTGCTCCAGGTCTaGCACGCTGCTGTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: KCQLSRMNLCGRVNTCSSAVLQV*HAAVAV
Trigger: TACTGCAACAGCAGCGTGCCAGACCTGGAGCACTGC...GCTTGAGCAGGTGTTCACCCTCCCACATAAATTCATCCTACTTAATTGGCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp CTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTTACAGCAGTGCTCCAGGTCTaGCACGCTGCTGTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: LSAFPTQGQIRVTTSILTAVLQV*HAAVAV
Trigger: TACTGCAACAGCAGCGTGCCAGACCTGGAGCACTGC...TGTAAGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTATGTCTGAGATATTCATaGAAGAGCAGACTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLCLRYS*KSRLGE
Trigger: TTCCCCCAGTCTGCTCTTCCATGAATATCTCAGACA...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp AAGTGCCAATTAAGTAGGATGAATTTATGTGGGAGGGTGAACACCTGCTCAAGCCCTTGCTCTCTGCGGTaGCGTCTGTCCATCGCAATG +
Preference number: 4 (lower is better)
Translates to: KCQLSRMNLCGRVNTCSSPCSLR*RLSIAM
Trigger: CATTGCGATGGACAGACGCCACCGCAGAGAGCAAGG...GCTTGAGCAGGTGTTCACCCTCCCACATAAATTCATCCTACTTAATTGGCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp GAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGGGCCTCTGGCTAGTAAAGAAATCCCTTaGGCCCAGCCTCACACTTTC +
Preference number: 4 (lower is better)
Translates to: ECVLKSLIVRLDNAGPLASKEIP*AQPHTF
Trigger: GAAAGTGTGAGGCTGGGCCCAAGGGATTTCTTTACT...AGCCAGAGGCCCAGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp GCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTTCTCCAGTCTCCGTGTaGGCTCTCTCCAAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: ALALGSHCTTLYSTSATFSPVSV*ALSKVA
Trigger: AGCCACCTTGGAGAGAGCCCACACGGAGACTGGAGA...AAAAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp CCTGTCTTCCGGACCTGGAGGTATAGGAATAGTGTGAAACTATCGGGCCATTTCGCTCAATCTGCAATCTaGCAACGCAGCCCCTTTTAC +
Preference number: 4 (lower is better)
Translates to: PVFRTWRYRNSVKLSGHFAQSAI*QRSPFY
Trigger: GTAAAAGGGGCTGCGTTGCCAGATTGCAGATTGAGC...GAAATGGCCCGATAGTTTCACACTATTCCTATACCTCCAGGTCCGGAAGACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554746.1
3UTR CAA 72 bp AGAGGAGCATCACCAGACACCAGATCTGCAGGCAACTaGATCTTGGGCTTCACAGCCTCAAGAATTGGAAGT +
Preference number: 4 (lower is better)
Translates to: RGASPDTRSAGN*ILGFTASRIGS
Trigger: ACTTCCAATTCTTGAGGCTGTGAAGCCCAAGATCAAGTTGCCTGCAGATCTGGTGTCTGGTGATGCTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 72 bp ATCACAGAGGTAAATGACCACTTAGAGTTGGCATCCTaGGTGGAGTCCTATGGGCAGTTAGGGTGGCAGACA +
Preference number: 4 (lower is better)
Translates to: ITEVNDHLELAS*VESYGQLGWQT
Trigger: TGTCTGCCACCCTAACTGCCCATAGGACTCCACCAAGGATGCCAACTCTAAGTGGTCATTTACCTCTGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp ATGTGCACACACGAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTCACACTGGCAACAGGTaGTGGCAAGTTATCAGCCGT +
Preference number: 4 (lower is better)
Translates to: MCTHECVLKSLIVRLDNAHTGNR*WQVISR
Trigger: ACGGCTGATAACTTGCCATCACCTGTTGCCAGTGTG...AGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTCGTGTGTGCACAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp ATGTGCACACACGAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGAGTTTGGACACCTGTaGGTAGAGCCCCAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: MCTHECVLKSLIVRLDNAEFGHL*VEPQGN
Trigger: ATTTCCCTGGGGCTCTACTCACAGGTGTCCAAACTC...AGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTCGTGTGTGCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTTCATATTTAATTCCCTaGCGGCCATCCCCCGGACTT +
Preference number: 4 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLSYLIP*RPSPGL
Trigger: AAGTCCGGGGGATGGCCGTCAGGGAATTAAATATGA...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp GAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGGGCCTCTGGCTAGAGAGAGAGCCAGCTaGCTTGAATGGAAGTATCAT +
Preference number: 4 (lower is better)
Translates to: ECVLKSLIVRLDNAGPLARERAS*LEWKYH
Trigger: ATGATACTTCCATTCAAGTCAGCTGGCTCTCTCTCT...AGCCAGAGGCCCAGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp GCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTGTTGCTTCTCACCGCTaGCTATGCGCTCCTGAACGA +
Preference number: 4 (lower is better)
Translates to: ALALGSHCTTLYSTSATFVASHR*LCAPER
Trigger: TCGTTCAGGAGCGCATAGTCAGCGGTGAGAAGCAAC...AAAAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp GGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTATGGGTGGTGGCCTCTaGACAAATGGTGTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: GAFSISHTGSNQGNYLHSMGGGL*TNGVFY
Trigger: GTAGAAGACACCATTTGTTCAGAGGCCACCACCCAT...AGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp GAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGGGCCTCTGGCTCTCAGTGGTAATTCCTaGCTCTGCCATTTACAGGAT +
Preference number: 4 (lower is better)
Translates to: ECVLKSLIVRLDNAGPLALSGNS*LCHLQD
Trigger: ATCCTGTAAATGGCAGAGTCAGGAATTACCACTGAG...AGCCAGAGGCCCAGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp ATGTGCACACACGAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTAGAAAGAGCCCAGGCTaGCGGTTAAAAACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: MCTHECVLKSLIVRLDNARKSPG*RLKTSS
Trigger: GCTGCTGGTTTTTAACCGTCAGCCTGGGCTCTTTCT...AGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTCGTGTGTGCACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp GCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTCTGGCCATAAGCAACTaGCAGAGTGGCTCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: ALALGSHCTTLYSTSATFLAISN*QSGSSP
Trigger: AGGGGAAGAGCCACTCTGTCAGTTGCTTATGGCCAG...AAAAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp GGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTTGGCCAGGATGGTCTTaGTTTCTTGACCTCGTGATC +
Preference number: 4 (lower is better)
Translates to: GAFSISHTGSNQGNYLHSWPGWS*FLDLVI
Trigger: GATCACGAGGTCAAGAAATCAAGACCATCCTGGCCA...AGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp TTGCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTAAGGGAAGCCTAAACTaGGCCTGCAGCCCATCAGAG +
Preference number: 4 (lower is better)
Translates to: LPWHWVLIVQPCTVLQQLKGSLN*ACSPSE
Trigger: CTCTGATGGGCTGCAGGCTCAGTTTAGGCTTCCCTT...AAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATTTGGTCACCCAGGTGTaGCTAGCCAAATTGCATCCC +
Preference number: 4 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDLVTQV*LAKLHP
Trigger: GGGATGCAATTTGGCTAGTCACACCTGGGTGACCAA...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAACGCCGAGGTCCCTCCTaGCCATCGTTGAGAACTGCC +
Preference number: 4 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKRRGPS*PSLRTA
Trigger: GGCAGTTCTCAACGATGGGCAGGAGGGACCTCGGCG...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp TTGCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTGCGCTCCTGAACGATaGCCCCTACTAAACTGTGGC +
Preference number: 4 (lower is better)
Translates to: LPWHWVLIVQPCTVLQQLCAPER*PLLNCG
Trigger: GCCACAGTTTAGTAGGGGGCATCGTTCAGGAGCGCA...AAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR GCA 90 bp CTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTTACAGGCTGGACGCTGTGTTaGTGCCGTTGTTCAGATAGG +
Preference number: 4 (lower is better)
Translates to: LSAFPTQGQIRVTTSILTGWTLC*CRCSDR
Trigger: CCTATCTGAACAACGGCAGCAACACAGCGTCCAGCC...TGTAAGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR GCA 90 bp GAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGGGCCTCTGGCTAGTTGTCCTTCTTGGTaGCTGCCTCGCAATAATCAT +
Preference number: 4 (lower is better)
Translates to: ECVLKSLIVRLDNAGPLASCPSW*LPRNNH
Trigger: ATGATTATTGCGAGGCAGGCACCAAGAAGGACAACT...AGCCAGAGGCCCAGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR GCA 90 bp CCTGTCTTCCGGACCTGGAGGTATAGGAATAGTGTGAAACTATCGGGCCATTTCTCACTTTTCAAAAGCTaGGATGGCCTCTGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: PVFRTWRYRNSVKLSGHFSLFKS*DGLCSQ
Trigger: TTGGCTGCAGAGGCCATCGCAGCTTTTGAAAAGTGA...GAAATGGCCCGATAGTTTCACACTATTCCTATACCTCCAGGTCCGGAAGACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp GAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGGGCCTCTGGCTGCTGAAGAGGATGCATaGCTGTTAATAACAACCAGC +
Preference number: 4 (lower is better)
Translates to: ECVLKSLIVRLDNAGPLAAEEDA*LLITTS
Trigger: GCTGGTTGTTATTAACAGGCATGCATCCTCTTCAGC...AGCCAGAGGCCCAGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTTTCAAGCAATTCTGCTaGCTCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLFKQFC*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCAGCAGAATTGCTTGAA...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp TCAGCTGACATAACAGAACCACTGATCAGTTGTTTTTGTCTAAATAGCAGGAAGTCGAGATCACGCCGCTaGACTCTGGCCTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: SADITEPLISCFCLNSRKSRSRR*TLAWGT
Trigger: TGTCCCCCAGGCCAGAGTGCAGCGGCGTGATCTCGA...CTTCCTGCTATTTAGACAAAAACAACTGATCAGTGGTTCTGTTATGTCAGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp GGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTCTTTTACCTGACGGCTaGGTCTTCTCCTTGCAATGG +
Preference number: 4 (lower is better)
Translates to: GAFSISHTGSNQGNYLHSLLPDG*VFSLQW
Trigger: CCATTGCAAGGAGAAGACGCAGCCGTCAGGTAAAAG...AGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554746.1
CDS-3UTR CCA 90 bp ATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCAGTAGCTCAGCGCCTTaGCGCGGAGATTTGCGGGCA +
Preference number: 4 (lower is better)
Translates to: MCILRKNHSFFLPWHWVLSSSAP*RGDLRA
Trigger: TGCCCGCAAATCTCCGCGCCAAGGCGCTGAGCTACT...GAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp CTGGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTAAAAAGCCCCATGGCTaGGCCACTTTGTGGTCTGTA +
Preference number: 4 (lower is better)
Translates to: LVLSAFPTQGQIRVTTSIKKPHG*ATLWSV
Trigger: TACAGACCACAAAGTGGCCCAGCCATGGGGCTTTTT...AATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp CCTGTCTTCCGGACCTGGAGGTATAGGAATAGTGTGAAACTATCGGGCCATTTCTCTTGGGAAGGTTCATaGGGAATTCGTCCAGTTGGT +
Preference number: 4 (lower is better)
Translates to: PVFRTWRYRNSVKLSGHFSWEGS*GIRPVG
Trigger: ACCAACTGGACGAATTCCCCATGAACCTTCCCAAGA...GAAATGGCCCGATAGTTTCACACTATTCCTATACCTCCAGGTCCGGAAGACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp ATGTGCACACACGAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTAGATCGGGAGGAGGGTaGGACAGCGAATTACGTACA +
Preference number: 4 (lower is better)
Translates to: MCTHECVLKSLIVRLDNARSGGG*DSELRT
Trigger: TGTACGTAATTCGCTGTCCCACCCTCCTCCCGATCT...AGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTCGTGTGTGCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp GAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGGGCCTCTGGCTGCTGTCAAAGGAATGTaGTTTATCTGGTTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: ECVLKSLIVRLDNAGPLAAVKGM*FIWLSC
Trigger: GCAGGACAACCAGATAAACCACATTCCTTTGACAGC...AGCCAGAGGCCCAGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp ATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCGCAGGCCGGGGGTCGTaGTGGGACAGGACAAAAGAT +
Preference number: 4 (lower is better)
Translates to: MCILRKNHSFFLPWHWVLAGRGS*WDRTKD
Trigger: ATCTTTTGTCCTGTCCCACCACGACCCCCGGCCTGC...GAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp GCAAAGTGGTTGATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGAGCTGTACTTGGGGCTaGGGTGAAGAGAGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: AKWLMCILRKNHSFFLPWSCTWG*GEERQA
Trigger: GGCCTGCCTCTCTTCACCCCAGCCCCAAGTACAGCT...CCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACATCAACCACTTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp ATGTGCACACACGAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGCTTCTGCTAGGGTTTaGAATAGAGAGGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: MCTHECVLKSLIVRLDNAASARV*NREGGR
Trigger: CCTCCCACCCTCTCTATTCCAAACCCTAGCAGAAGC...AGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTCGTGTGTGCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp GGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTCCCCCTACTAAACTGTaGCCCATTTTCACCCATGTG +
Preference number: 4 (lower is better)
Translates to: GAFSISHTGSNQGNYLHSPPTKL*PIFTHV
Trigger: CACATGGGTGAAAATGGGCCACAGTTTAGTAGGGGG...AGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp GGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAAGGGGAGCCCATGCTGTaGGACGTCGTCTGCTCATGG +
Preference number: 4 (lower is better)
Translates to: GIYSDSFNSKVVDVYPKEGEPML*DVVCSW
Trigger: CCATGAGCAGACGACGTCCCACAGCATGGGCTCCCC...TTCCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp GAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGGGCCTCTGGCTAGTATCGCATGTTGTTaGGGATATGGCAGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: ECVLKSLIVRLDNAGPLASIACC*GYGSLC
Trigger: ACACAGACTGCCATATCCCCAACAACATGCGATACT...AGCCAGAGGCCCAGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTATTTTTGCCTTGGCATTaGGTTCTCATTGTACAACCC +
Preference number: 4 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLFLPWH*VLIVQP
Trigger: GGGTTGTACAATGAGAACCCAATGCCAAGGCAAAAA...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp ATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCGCACCCACCAGGGCCTaGGCATGGCTCTTAACACTG +
Preference number: 4 (lower is better)
Translates to: MCILRKNHSFFLPWHWVLAPTRA*AWLLTL
Trigger: CAGTGTTAAGAGCCATGCCCAGGCCCTGGTGGGTGC...GAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTAAGCCCGAGAGAGAAGTaGTCTTATCCAAGATACAAA +
Preference number: 4 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLSPREK*SYPRYK
Trigger: TTTGTATCTTGGATAAGACCACTTCTCTCTCGGGCT...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTCACAGTGGAGGATGGTaGAGCAGAGTAAGGACAAGA +
Preference number: 4 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLHSGGW*SRVRTR
Trigger: TCTTGTCCTTACTCTGCTCCACCATCCTCCACTGTG...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp GGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTGCATTTCAAGCACAGTaGAGGATGGTGGAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: GAFSISHTGSNQGNYLHSAFQAQ*RMVEQS
Trigger: ACTCTGCTCCACCATCCTCCACTGTGCTTGAAATGC...AGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp ATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTGTACGCTGCACTCTGGCCTaGGGGACAGAGCGAGACACT +
Preference number: 4 (lower is better)
Translates to: ILRKNHSFFLPWHWVLIVRCTLA*GTERDT
Trigger: AGTGTCTCGCTCTGTCCCCCAGGCCAGAGTGCAGCG...TACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 72 bp CAGAGTAGCATACAAGAGGCTTACTTGGGAGGGTTTTaGCAGCTGACACCTGTGGAAGGCTATGAAGAACCA +
Preference number: 4 (lower is better)
Translates to: QSSIQEAYLGGF*QLTPVEGYEEP
Trigger: TGGTTCTTCATAGCCTTCCACAGGTGTCAGCTGCAAAAACCCTCCCAAGTAAGCCTCTTGTATGCTACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 72 bp CTCTCCAAGGTGGCTTTGGTGAAGGAGACAGTTCGCTaGGACCAGGGTTTCTTTCATGTGCTTCTAGGAAAA +
Preference number: 4 (lower is better)
Translates to: LSKVALVKETVR*DQGFFHVLLGK
Trigger: TTTTCCTAGAAGCACATGAAAGAAACCCTGGTCCAAGCGAACTGTCTCCTTCACCAAAGCCACCTTGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp GCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTCTCGTTCCTCCGCGGTaGCAATGGATAATGCCAAAC +
Preference number: 4 (lower is better)
Translates to: ALALGSHCTTLYSTSATFLVPPR*QWIMPN
Trigger: GTTTGGCATTATCCATTGTCACCGCGGAGGAACGAG...AAAAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTAGGTCAAGCCAGCCTTaGTTAGCCTACGAACTTCTT +
Preference number: 4 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLRSSQP*LAYELL
Trigger: AAGAAGTTCGTAGGCTAATCAAGGCTGGCTTGACCT...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp CCTGTCTTCCGGACCTGGAGGTATAGGAATAGTGTGAAACTATCGGGCCATTTCGGCACACTGCTCAGGTaGTTCTTAGACAAAAACAAC +
Preference number: 4 (lower is better)
Translates to: PVFRTWRYRNSVKLSGHFGTLLR*FLDKNN
Trigger: GTTGTTTTTGTCTAAGAATCACCTGAGCAGTGTGCC...GAAATGGCCCGATAGTTTCACACTATTCCTATACCTCCAGGTCCGGAAGACAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp GCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTCCTGCAAATAGAGCCTaGTCAGATGCGTACCTGGGA +
Preference number: 4 (lower is better)
Translates to: ALALGSHCTTLYSTSATFPANRA*SDAYLG
Trigger: TCCCAGGTACGCATCTGATCAGGCTCTATTTGCAGG...AAAAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp GGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTTTATCAAAAACCCCTTaGGTCAGCATCCGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: GAFSISHTGSNQGNYLHSLSKTP*VSIRSW
Trigger: CCAACTGCGGATGCTGACTCAAGGGGTTTTTGATAA...AGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp TGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTGAGAGGGTGGGAGGCTaGGTGGTCGGAGAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: CILRKNHSFFLPWHWVLIERVGG*VVGEAV
Trigger: TACAGCTTCTCCGACCACTCAGCCTCCCACCCTCTC...AATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp ATGTGCACACACGAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTATGGGTGGTGGCCTCTaGACAAATGGTGTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: MCTHECVLKSLIVRLDNAMGGGL*TNGVFY
Trigger: GTAGAAGACACCATTTGTTCAGAGGCCACCACCCAT...AGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTCGTGTGTGCACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp GAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGGGCCTCTGGCTTGGTTTGAAGGAACTTaGGATCCCAGGAAGATAAAC +
Preference number: 4 (lower is better)
Translates to: ECVLKSLIVRLDNAGPLAWFEGT*DPRKIN
Trigger: GTTTATCTTCCTGGGATCTCAAGTTCCTTCAAACCA...AGCCAGAGGCCCAGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp TTCGATTATCTTTTACTCCTGTCAAGATTTTGTCAACTTAACGAGAAGGCATGCAGGCGGAGCTTGCAGTaGGTCGAGATCACGCCGCTG +
Preference number: 4 (lower is better)
Translates to: FDYLLLLSRFCQLNEKACRRSLQ*VEITPL
Trigger: CAGCGGCGTGATCTCGACTCACTGCAAGCTCCGCCT...GCATGCCTTCTCGTTAAGTTGACAAAATCTTGACAGGAGTAAAAGATAATCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp ACGAGCTCTAACTCTAGACTTGGAGGCAGTGAGGTGATCAGAACAAGCTATTTTGATCTGCAGGCAACTTaGTCTTGGGCTTCACAGCCT +
Preference number: 4 (lower is better)
Translates to: TSSNSRLGGSEVIRTSYFDLQAT*SWASQP
Trigger: AGGCTGTGAAGCCCAAGATCAAGTTGCCTGCAGATC...AAAATAGCTTGTTCTGATCACCTCACTGCCTCCAAGTCTAGAGTTAGAGCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp TTGCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTGGGTCACTCTTTCTCTaGCATCCCAGTCAGGAATCG +
Preference number: 4 (lower is better)
Translates to: LPWHWVLIVQPCTVLQQLGSLFL*HPSQES
Trigger: CGATTCCTGACTGGGATGGCAGAGAAAGAGTGACCC...AAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR GCA 90 bp CTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTTACAACCAGGCTCAGGTGTTaGTTCTCACCGCTGACTATG +
Preference number: 4 (lower is better)
Translates to: LSAFPTQGQIRVTTSILTTRLRC*FSPLTM
Trigger: CATAGTCAGCGGTGAGAAGCAACACCTGAGCCTGGT...TGTAAGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR GCA 90 bp TCAGCTGACATAACAGAACCACTGATCAGTTGTTTTTGTCTAAATAGCAGGAAGCTGTGGGACGTCGTCTaGTCATGGCTGGACGCTGTG +
Preference number: 4 (lower is better)
Translates to: SADITEPLISCFCLNSRKLWDVV*SWLDAV
Trigger: CACAGCGTCCAGCCATGAGCAGACGACGTCCCACAG...CTTCCTGCTATTTAGACAAAAACAACTGATCAGTGGTTCTGTTATGTCAGCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAAGAAAGGGGGAGCCCATaGTGTGGGACGTCGTCTGCT +
Preference number: 4 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKERGSP*CGTSSA
Trigger: AGCAGACGACGTCCCACAGCATGGGCTCCCCCTTTC...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp CTGGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCCCTTTTTGTGCATATaGCAGCAAAAGACGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LVLSAFPTQGQIRVTTSIPFLCI*QQKTLS
Trigger: GCTCAGCGTCTTTTGCTGGCATATGCACAAAAAGGG...AATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR GCA 90 bp ATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCTGTCACGTATGGCAGTaGTCCAGGTCTGGCACGCTG +
Preference number: 4 (lower is better)
Translates to: MCILRKNHSFFLPWHWVLCHVWQ*SRSGTL
Trigger: CAGCGTGCCAGACCTGGAGCACTGCCATACGTGACA...GAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR GCA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTCTGCGTGTCTTTATGTaGACACACGAGTGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLLRVFM*THECVL
Trigger: GAGAACACACTCGTGTGTGCACATAAAGACACGCAG...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp ACGAGCTCTAACTCTAGACTTGGAGGCAGTGAGGTGATCAGAACAAGCTATTTTCTCTTTTCTACGCCCTaGTCTGCCAGGATTAGGGGA +
Preference number: 4 (lower is better)
Translates to: TSSNSRLGGSEVIRTSYFLFSTP*SARIRG
Trigger: TCCCCTAATCCTGGCAGAGCAGGGCGTAGAAAAGAG...AAAATAGCTTGTTCTGATCACCTCACTGCCTCCAAGTCTAGAGTTAGAGCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTATTCAGCTCTACTGACTaGACAGTTTCAATTCTTGTG +
Preference number: 4 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLFSSTD*TVSILV
Trigger: CACAAGAATTGAAACTGTGCAGTCAGTAGAGCTGAA...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp ACGAGCTCTAACTCTAGACTTGGAGGCAGTGAGGTGATCAGAACAAGCTATTTTCCTGCGATTGTCCCATaGAGTGGGCTGCTAATGCAT +
Preference number: 4 (lower is better)
Translates to: TSSNSRLGGSEVIRTSYFPAIVP*SGLLMH
Trigger: ATGCATTAGCAGCCCACTGCATGGGACAATCGCAGG...AAAATAGCTTGTTCTGATCACCTCACTGCCTCCAAGTCTAGAGTTAGAGCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp CTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTTACATTCCTCGTATCTGCCTaGGATTGTCCCATGCAGTGG +
Preference number: 4 (lower is better)
Translates to: LSAFPTQGQIRVTTSILTFLVSA*DCPMQW
Trigger: CCACTGCATGGGACAATCGCAGGCAGATACGAGGAA...TGTAAGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp GGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAAAGCTGCGATGGCCTCTaGAGCCAAGGTCCGGAGATC +
Preference number: 4 (lower is better)
Translates to: GIYSDSFNSKVVDVYPKESCDGL*SQGPEI
Trigger: GATCTCCGGACCTTGGCTGCAGAGGCCATCGCAGCT...TTCCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATTTGCCTAAGCTGGAGTaGAGTGGCACAATCAGAGCT +
Preference number: 4 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDLPKLE*SGTIRA
Trigger: AGCTCTGATTGTGCCACTGCACTCCAGCTTAGGCAA...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp GGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAAAGTAGCTCAGCGCCTTaGCGCGGAGATTTGCGGGCA +
Preference number: 4 (lower is better)
Translates to: GIYSDSFNSKVVDVYPKESSSAP*RGDLRA
Trigger: TGCCCGCAAATCTCCGCGCCAAGGCGCTGAGCTACT...TTCCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp GAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGGGCCTCTGGCTATCAAAATGACTGGATaGGGTTCTGTTGAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: ECVLKSLIVRLDNAGPLAIKMTG*GSVEVQ
Trigger: CTGGACTTCAACAGAACCCCATCCAGTCATTTTGAT...AGCCAGAGGCCCAGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp AAGTGCCAATTAAGTAGGATGAATTTATGTGGGAGGGTGAACACCTGCTCAAGCTCAAGCTTCAAGAGCTaGGCAAGAGCAGCCCGTGAA +
Preference number: 4 (lower is better)
Translates to: KCQLSRMNLCGRVNTCSSSSFKS*ARAARE
Trigger: TTCACGGGCTGCTCTTGCCCAGCTCTTGAAGCTTGA...GCTTGAGCAGGTGTTCACCCTCCCACATAAATTCATCCTACTTAATTGGCACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp ATGTGCACACACGAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTCTTCCACCCCCACTGTaGATATGGAGTTGTCATCCA +
Preference number: 4 (lower is better)
Translates to: MCTHECVLKSLIVRLDNALPPPL*IWSCHP
Trigger: TGGATGACAACTCCATATCCACAGTGGGGGTGGAAG...AGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTCGTGTGTGCACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTAAGCTCGTGAGATTCTaGAAGGCCATGTCGGATATG +
Preference number: 4 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLKLVRF*KAMSDM
Trigger: CATATCCGACATGGCCTTCCAGAATCTCACGAGCTT...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp CAGGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGTTGAGCTTGGTGAGATaGCTGAAGGTGCCCTCGGCG +
Preference number: 4 (lower is better)
Translates to: QEFILTASTAKWLMCILRLSLVR*LKVPSA
Trigger: CGCCGAGGGCACCTTCAGCCATCTCACCAAGCTCAA...CCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp GGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTGTCAGCATCCGCAGTTaGTTGTTGGATATATCCAGC +
Preference number: 4 (lower is better)
Translates to: GAFSISHTGSNQGNYLHSVSIRS*LLDISS
Trigger: GCTGGATATATCCAACAACCAACTGCGGATGCTGAC...AGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp GCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTTGGCCTCTGAACAAATaGTGTCTTCTACCGCGCGGT +
Preference number: 4 (lower is better)
Translates to: ALALGSHCTTLYSTSATFWPLNK*CLLPRG
Trigger: ACCGCGCGGTAGAAGACACCATTTGTTCAGAGGCCA...AAAAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp TTGCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTAGGAGGCATGGGTGGTaGCCTCTGAACAAATGGTGT +
Preference number: 4 (lower is better)
Translates to: LPWHWVLIVQPCTVLQQLRRHGW*PLNKWC
Trigger: ACACCATTTGTTCAGAGGCCACCACCCATGCCTCCT...AAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTTGGAGTTGTCCTTCTTaGTGCCTGCCTCGCAATAAT +
Preference number: 4 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLWSCPS*CLPRNN
Trigger: ATTATTGCGAGGCAGGCACCAAGAAGGACAACTCCA...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp CTGGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTATTAATGCCCCCATTTaGGGTGTAAATGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LVLSAFPTQGQIRVTTSIINAPI*GVNGLQ
Trigger: CTGCAGCCCATTTACACCCCAAATGGGGGCATTAAT...AATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp GCAAAGTGGTTGATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGTCTGGCTGTCACGTATaGCAGTGCTCCAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: AKWLMCILRKNHSFFLPWSGCHV*QCSRSG
Trigger: GCCAGACCTGGAGCACTGCCATACGTGACAGCCAGA...CCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACATCAACCACTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp CTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTTACATTTCAAAAGCTGCGATaGCCTCTGCAGCCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: LSAFPTQGQIRVTTSILTFQKLR*PLQPRS
Trigger: GGACCTTGGCTGCAGAGGCCATCGCAGCTTTTGAAA...TGTAAGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp GAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGGGCCTCTGGCTCAGGCTCTGAGACACTaGAATGCATTAGAAAAAGTG +
Preference number: 4 (lower is better)
Translates to: ECVLKSLIVRLDNAGPLAQALRH*NALEKV
Trigger: CACTTTTTCTAATGCATTCCAGTGTCTCAGAGCCTG...AGCCAGAGGCCCAGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp TTGCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTACTCTGTCTTCAGCCTaGGCGAAAGGCAAGAGGCTA +
Preference number: 4 (lower is better)
Translates to: LPWHWVLIVQPCTVLQQLTLSSA*AKGKRL
Trigger: TAGCCTCTTGCCTTTCGCCCAGGCTGAAGACAGAGT...AAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATTCTCAGAATGACTGGTaGGGCCCCTTCTTCTACTTG +
Preference number: 4 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDSQNDW*GPFFYL
Trigger: CAAGTAGAAGAAGGGGCCCCACCAGTCATTCTGAGA...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTATTCTGTAAAATTCCCTaGGTCCCATACATACATCTC +
Preference number: 4 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLFCKIP*VPYIHL
Trigger: GAGATGTATGTATGGGACCCAGGGAATTTTACAGAA...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp GAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGGGCCTCTGGCTTGGGAAATGCACATGTaGGCTTACAGCTTCTTTAGT +
Preference number: 4 (lower is better)
Translates to: ECVLKSLIVRLDNAGPLAWEMHM*AYSFFS
Trigger: ACTAAAGAAGCTGTAAGCCCACATGTGCATTTCCCA...AGCCAGAGGCCCAGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp GGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTGCAAATGGAGAACTCTaGCATTCTTGGGAAGGTTCA +
Preference number: 4 (lower is better)
Translates to: GAFSISHTGSNQGNYLHSANGEL*HSWEGS
Trigger: TGAACCTTCCCAAGAATGTCAGAGTTCTCCATTTGC...AGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp CCTGTCTTCCGGACCTGGAGGTATAGGAATAGTGTGAAACTATCGGGCCATTTCGCCCGTGAAATGGTCTaGATATTGTTTTCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: PVFRTWRYRNSVKLSGHFAREMV*ILFSCK
Trigger: TTTGCAGGAAAACAATATTCAGACCATTTCACGGGC...GAAATGGCCCGATAGTTTCACACTATTCCTATACCTCCAGGTCCGGAAGACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTGACGCTCCAAGCTCGTaGGATTCTGGAAGGCCATGT +
Preference number: 4 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVDAPSS*DSGRPC
Trigger: ACATGGCCTTCCAGAATCTCACGAGCTTGGAGCGTC...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp ATGTGCACACACGAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTCCATTTTCACCCATGTaGGTTTGTATGCCATCACGG +
Preference number: 4 (lower is better)
Translates to: MCTHECVLKSLIVRLDNAPFSPM*VCMPSR
Trigger: CCGTGATGGCATACAAACTCACATGGGTGAAAATGG...AGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTCGTGTGTGCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp GCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTGCTTCAATCACAGCATaGAGATGTTGTCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: ALALGSHCTTLYSTSATFASITA*RCCPPW
Trigger: CCAGGGAGGACAACATCTTCATGCTGTGATTGAAGC...AAAAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp ATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCTCCCAGCACTTTGGGTaGTCGAGGTGGGATGATTGC +
Preference number: 4 (lower is better)
Translates to: MCILRKNHSFFLPWHWVLSQHFG*SRWDDC
Trigger: GCAATCATCCCACCTCGATCACCCAAAGTGCTGGGA...GAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp ACGAGCTCTAACTCTAGACTTGGAGGCAGTGAGGTGATCAGAACAAGCTATTTTAGGAGAAAACACATTTaGGAGGCCACTCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: TSSNSRLGGSEVIRTSYFRRKHI*EATLVL
Trigger: CAGCACCAGAGTGGCCTCTCAAATGTGTTTTCTCCT...AAAATAGCTTGTTCTGATCACCTCACTGCCTCCAAGTCTAGAGTTAGAGCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp CCTGTCTTCCGGACCTGGAGGTATAGGAATAGTGTGAAACTATCGGGCCATTTCAAATGTTCTTCCATTTaGCTGCTACCATCCCCACTA +
Preference number: 4 (lower is better)
Translates to: PVFRTWRYRNSVKLSGHFKCSSI*LLPSPL
Trigger: TAGTGGGGATGGTAGCAGTCAAATGGAAGAACATTT...GAAATGGCCCGATAGTTTCACACTATTCCTATACCTCCAGGTCCGGAAGACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp GCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTACCTGTGGAAGGCTATaGAGAACCAGGACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: ALALGSHCTTLYSTSATFTCGRL*RTRTGR
Trigger: TCTACCAGTCCTGGTTCTTCATAGCCTTCCACAGGT...AAAAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTACTCATACCAAATCTATaGGGAAATTATGGCTACAGT +
Preference number: 4 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLLIPNL*GNYGYS
Trigger: ACTGTAGCCATAATTTCCTCATAGATTTGGTATGAG...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp AAGTGCCAATTAAGTAGGATGAATTTATGTGGGAGGGTGAACACCTGCTCAAGCATCCAGGGAAAAAGCTaGCTGTCACAGCTTTCCACC +
Preference number: 4 (lower is better)
Translates to: KCQLSRMNLCGRVNTCSSIQGKS*LSQLST
Trigger: GGTGGAAAGCTGTGACAGTCAGCTTTTTCCCTGGAT...GCTTGAGCAGGTGTTCACCCTCCCACATAAATTCATCCTACTTAATTGGCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp ATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCGAGGTTGCAGTGAGCTaGGATCACGCCACTGCATTC +
Preference number: 4 (lower is better)
Translates to: MCILRKNHSFFLPWHWVLEVAVS*DHATAF
Trigger: GAATGCAGTGGCGTGATCTCAGCTCACTGCAACCTC...GAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATCCTGAGAGTAATTCATaGTATCTCCATGGGGCGTGT +
Preference number: 4 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDPESNS*YLHGAC
Trigger: ACACGCCCCATGGAGATATCATGAATTACTCTCAGG...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp CAGGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGTCATTGAGCAAGACGTaGGGAGGGTGGCTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: QEFILTASTAKWLMCILRSLSKT*GGWLGK
Trigger: TTTCCCCAGCCACCCTCCTCACGTCTTGCTCAATGA...CCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp ATGTGCACACACGAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGAGTTGTCATCCAGGTaGAGCTCTTCAAGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: MCTHECVLKSLIVRLDNAELSSR*SSSSFK
Trigger: CTTGAAGCTTGAAGAGCTGCACCTGGATGACAACTC...AGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTCGTGTGTGCACAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR GCA 90 bp ATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCTGCGCTCCTGAACGATaGCCCCTACTAAACTGTGGC +
Preference number: 4 (lower is better)
Translates to: MCILRKNHSFFLPWHWVLCAPER*PLLNCG
Trigger: GCCACAGTTTAGTAGGGGGCATCGTTCAGGAGCGCA...GAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR GCA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGCTGTGGGACGTCGTCTaGTCATGGCTGGACGCTGTG +
Preference number: 4 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHELWDVV*SWLDAV
Trigger: CACAGCGTCCAGCCATGAGCAGACGACGTCCCACAG...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR GCA 90 bp ATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTGTATGTCACGTATGGCAGTaGTCCAGGTCTGGCACGCTG +
Preference number: 4 (lower is better)
Translates to: ILRKNHSFFLPWHWVLIVCHVWQ*SRSGTL
Trigger: CAGCGTGCCAGACCTGGAGCACTGCCATACGTGACA...TACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR GCA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTCACTGTTTTCTGCTTTaGTTTCCCATGCAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLHCFLL*FPMQLE
Trigger: TTCCAGCTGCATGGGAAAGCAAAGCAGAAAACAGTG...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTGTGAGGGAGAAGATTTaGCTGATTTGGCTAAGAACG +
Preference number: 4 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLVREKI*LIWLRT
Trigger: CGTTCTTAGCCAAATCAGGCAAATCTTCTCCCTCAC...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp ATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCAGTGAGCCGAGCTTGTaGCACTGCACTCCAATCTGG +
Preference number: 4 (lower is better)
Translates to: MCILRKNHSFFLPWHWVLSEPSL*HCTPIW
Trigger: CCAGATTGGAGTGCAGTGGCACAAGCTCGGCTCACT...GAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp TTGCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTGGGACTATAGGCACATaGCACCACTCCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: LPWHWVLIVQPCTVLQQLGTIGT*HHSWLI
Trigger: AATTAGCCAGGAGTGGTGGCATGTGCCTATAGTCCC...AAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp GGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTCAGGTGGTAGACTATTaGACCTGCATTGTAGAGACA +
Preference number: 4 (lower is better)
Translates to: GAFSISHTGSNQGNYLHSQVVDY*TCIVET
Trigger: TGTCTCTACAATGCAGGTGCAATAGTCTACCACCTG...AGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp ACGAGCTCTAACTCTAGACTTGGAGGCAGTGAGGTGATCAGAACAAGCTATTTTCTGGGAGAAGGAGGTTaGATTGAGCCAAGATTGTGC +
Preference number: 4 (lower is better)
Translates to: TSSNSRLGGSEVIRTSYFLGEGG*IEPRLC
Trigger: GCACAATCTTGGCTCAATGCAACCTCCTTCTCCCAG...AAAATAGCTTGTTCTGATCACCTCACTGCCTCCAAGTCTAGAGTTAGAGCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp ACGAGCTCTAACTCTAGACTTGGAGGCAGTGAGGTGATCAGAACAAGCTATTTTGTAGTGGTGGGCACCTaGAATCTCATCTACTCGAGA +
Preference number: 4 (lower is better)
Translates to: TSSNSRLGGSEVIRTSYFVVVGT*NLIYSR
Trigger: TCTCGAGTAGATGAGATTGCAGGTGCCCACCACTAC...AAAATAGCTTGTTCTGATCACCTCACTGCCTCCAAGTCTAGAGTTAGAGCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp TTGCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTGGTTAAGCTCAATCTaGAATCTGGCAACGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LPWHWVLIVQPCTVLQQLWLSSI*NLATQP
Trigger: GGGCTGCGTTGCCAGATTGCAGATTGAGCTTAACCA...AAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554746.1
CDS-3UTR CCA 90 bp CCTGTCTTCCGGACCTGGAGGTATAGGAATAGTGTGAAACTATCGGGCCATTTCATCAAAATGACTGGATaGGGTTCTGTTGAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: PVFRTWRYRNSVKLSGHFIKMTG*GSVEVQ
Trigger: CTGGACTTCAACAGAACCCCATCCAGTCATTTTGAT...GAAATGGCCCGATAGTTTCACACTATTCCTATACCTCCAGGTCCGGAAGACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp GCAAAGTGGTTGATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGGGCTGGGCCACTTTGTaGTCTGTAGGCCCATTTCTG +
Preference number: 4 (lower is better)
Translates to: AKWLMCILRKNHSFFLPWGWATL*SVGPFL
Trigger: CAGAAATGGGCCTACAGACCACAAAGTGGCCCAGCC...CCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACATCAACCACTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTGCTGTCAAAGGAATGTaGTTTATCTGGTTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLAVKGM*FIWLSC
Trigger: GCAGGACAACCAGATAAACCACATTCCTTTGACAGC...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp GGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAACGGAGAAGCTGTACTTaGGGCTGGGGTGAAGAGAGG +
Preference number: 4 (lower is better)
Translates to: GIYSDSFNSKVVDVYPKERRSCT*GWGEER
Trigger: CCTCTCTTCACCCCAGCCCCAAGTACAGCTTCTCCG...TTCCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp ATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTGTAGGGTGGGAGGCTGAGTaGTCGGAGAAGCTGTACTTG +
Preference number: 4 (lower is better)
Translates to: ILRKNHSFFLPWHWVLIVGWEAE*SEKLYL
Trigger: CAAGTACAGCTTCTCCGACCACTCAGCCTCCCACCC...TACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp ATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTGTATCGTCTGCTCATGGCTaGACGCTGTGTTGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: ILRKNHSFFLPWHWVLIVSSAHG*TLCCCR
Trigger: ACGGCAGCAACACAGCGTCCAGCCATGAGCAGACGA...TACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAAGACGTCGTCTGCTCATaGCTGGACGCTGTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKDVVCS*LDAVLL
Trigger: CAGCAACACAGCGTCCAGCCATGAGCAGACGACGTC...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp GGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAAGACGTCGTCTGCTCATaGCTGGACGCTGTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: GIYSDSFNSKVVDVYPKEDVVCS*LDAVLL
Trigger: CAGCAACACAGCGTCCAGCCATGAGCAGACGACGTC...TTCCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp CCTGTCTTCCGGACCTGGAGGTATAGGAATAGTGTGAAACTATCGGGCCATTTCAGACGATCTGAAAACTaGTTTCTGTCATCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PVFRTWRYRNSVKLSGHFRRSEN*FLSSPG
Trigger: TCCTGGAGATGACAGAAACCAGTTTTCAGATCGTCT...GAAATGGCCCGATAGTTTCACACTATTCCTATACCTCCAGGTCCGGAAGACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp TGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTTCTGGCTGTCACGTATaGCAGTGCTCCAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: CILRKNHSFFLPWHWVLISGCHV*QCSRSG
Trigger: GCCAGACCTGGAGCACTGCCATACGTGACAGCCAGA...AATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp GCAAAGTGGTTGATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGATAACGCTGGGCCTCTaGCTGTCACGTATGGCAGTG +
Preference number: 4 (lower is better)
Translates to: AKWLMCILRKNHSFFLPWITLGL*LSRMAV
Trigger: CACTGCCATACGTGACAGCCAGAGGCCCAGCGTTAT...CCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACATCAACCACTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTAGTGACATTTACTTCATaGGTCCCTATAATAATGGTC +
Preference number: 4 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLVTFTS*VPIIMV
Trigger: GACCATTATTATAGGGACCCATGAAGTAAATGTCAC...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp ACGAGCTCTAACTCTAGACTTGGAGGCAGTGAGGTGATCAGAACAAGCTATTTTCTTCCTGGCCCAAAGTaGTTTCAGCAGCCAGAAATC +
Preference number: 4 (lower is better)
Translates to: TSSNSRLGGSEVIRTSYFLPGPK*FQQPEI
Trigger: GATTTCTGGCTGCTGAAACCACTTTGGGCCAGGAAG...AAAATAGCTTGTTCTGATCACCTCACTGCCTCCAAGTCTAGAGTTAGAGCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTAAAGATTTGCCTGATTTaGCTAAGAACGCATTTCACT +
Preference number: 4 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLKICLI*LRTHFT
Trigger: AGTGAAATGCGTTCTTAGCCAAATCAGGCAAATCTT...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp ACGAGCTCTAACTCTAGACTTGGAGGCAGTGAGGTGATCAGAACAAGCTATTTTGTAATCTTGATCTCCTaGGCTCAAGTGACCCTCCTG +
Preference number: 4 (lower is better)
Translates to: TSSNSRLGGSEVIRTSYFVILIS*AQVTLL
Trigger: CAGGAGGGTCACTTGAGCCCAGGAGATCAAGATTAC...AAAATAGCTTGTTCTGATCACCTCACTGCCTCCAAGTCTAGAGTTAGAGCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTACCAAGCTCAACTTTATaGTTGGTTGATCAAAACTCA +
Preference number: 4 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLPSSTL*LVDQNS
Trigger: TGAGTTTTGATCAACCAACCATAAAGTTGAGCTTGG...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATAACAAAACAGGCCAGTaGCTCAGGCCTATAATCCCA +
Preference number: 4 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDNKTGQ*LRPIIP
Trigger: TGGGATTATAGGCCTGAGCCACTGGCCTGTTTTGTT...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 72 bp TCTGAATGGGATCAGATTCTATCTGAGTCACCTCATTaGGCCAGGCAGCATCAAGCTCTTTATTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: SEWDQILSESPH*ARQHQALYWPV
Trigger: CACTGGCCAATAAAGAGCTTGATGCTGCCTGGCCAAATGAGGTGACTCAGATAGAATCTGATCCCATTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 72 bp CATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTaGGTCCCAGGCAACTTCCATATCTTAAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: HVCVTVSLGQSM*VPGNFHILSPF
Trigger: GAAGGGGCTTAAGATATGGAAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp GGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTGCCCGTGAAATGGTCTaGATATTGTTTTCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: GAFSISHTGSNQGNYLHSAREMV*ILFSCK
Trigger: TTTGCAGGAAAACAATATTCAGACCATTTCACGGGC...AGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp GGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTAGGCCATGTCGGATATaGCAGCAATTCGATTTTCAT +
Preference number: 4 (lower is better)
Translates to: GAFSISHTGSNQGNYLHSRPCRI*QQFDFH
Trigger: ATGAAAATCGAATTGCTGTCATATCCGACATGGCCT...AGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp GCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTTTATCAAAAACCCCTTaGGTCAGCATCCGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: ALALGSHCTTLYSTSATFLSKTP*VSIRSW
Trigger: CCAACTGCGGATGCTGACTCAAGGGGTTTTTGATAA...AAAAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp GCAAAGTGGTTGATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCTGACTATGCGCTCCTaGACGATGCCCCCTACTAAA +
Preference number: 4 (lower is better)
Translates to: AKWLMCILRKNHSFFLPWLTMRS*TMPPTK
Trigger: TTTAGTAGGGGGCATCGTTCAGGAGCGCATAGTCAG...CCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACATCAACCACTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp CTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTTACAGCACCCTTCTCTGTCTaGGATATTCATGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: LSAFPTQGQIRVTTSILTAPFSV*DIHGRA
Trigger: TGCTCTTCCATGAATATCTCAGACAGAGAAGGGTGC...TGTAAGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATGAAACAGGGCAACAGTaGATGAGAGTCATCACTTTC +
Preference number: 4 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDETGQQ*MRVITF
Trigger: GAAAGTGATGACTCTCATTCACTGTTGCCCTGTTTC...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp TTGCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTACTTCACTTCTACCTTaGAAATCCTGCACACGTGCC +
Preference number: 4 (lower is better)
Translates to: LPWHWVLIVQPCTVLQQLTSLLP*KSCTRA
Trigger: GGCACGTGTGCAGGATTTTCAAGGTAGAAGTGAAGT...AAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp CTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTTACAATTTATGTGGGAGGGTaGACACCTGCTCAAGCAACA +
Preference number: 4 (lower is better)
Translates to: LSAFPTQGQIRVTTSILTIYVGG*TPAQAT
Trigger: TGTTGCTTGAGCAGGTGTTCACCCTCCCACATAAAT...TGTAAGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp GGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTCTTATGCAATTAGAATaGGGCTTACACTGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: GAFSISHTGSNQGNYLHSLMQLE*GLHCPQ
Trigger: TTGGGGACAGTGTAAGCCTCATTCTAATTGCATAAG...AGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATCACCTCAACTTCCCTTaGCACTCATGTCTTAGCAAA +
Preference number: 4 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDHLNFP*HSCLSK
Trigger: TTTGCTAAGACATGAGTGTCAAGGGAAGTTGAGGTG...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp GAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGGGCCTCTGGCTTGGTTGATGTGTACATaGGTGTTCCTTGTATTACTT +
Preference number: 4 (lower is better)
Translates to: ECVLKSLIVRLDNAGPLAWLMCT*VFLVLL
Trigger: AAGTAATACAAGGAACACTCATGTACACATCAACCA...AGCCAGAGGCCCAGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp TTGCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTGGTTAAGCTCAATCTaGAATCTGACGGCTGCGTCT +
Preference number: 4 (lower is better)
Translates to: LPWHWVLIVQPCTVLQQLWLSSI*NLTAAS
Trigger: AGACGCAGCCGTCAGATTGCAGATTGAGCTTAACCA...AAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp TTGCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTGAGTTGTCATCCAGGTaGAGCTCTTCAAGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: LPWHWVLIVQPCTVLQQLELSSR*SSSSFK
Trigger: CTTGAAGCTTGAAGAGCTGCACCTGGATGACAACTC...AAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR GCA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTGGGTCACTCTTTCTCTaGCATCCCAGTCAGGAATCG +
Preference number: 4 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVGSLFL*HPSQES
Trigger: CGATTCCTGACTGGGATGGCAGAGAAAGAGTGACCC...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp CAGGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGCTGGCACGCTGCTGTTaGAGTATCGCATGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: QEFILTASTAKWLMCILRLARCC*SIACCW
Trigger: CCAACAACATGCGATACTGCAACAGCAGCGTGCCAG...CCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR GCA 90 bp TTGCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTCTGCGTGTCTTTATGTaGACACACGAGTGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: LPWHWVLIVQPCTVLQQLLRVFM*THECVL
Trigger: GAGAACACACTCGTGTGTGCACATAAAGACACGCAG...AAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR GCA 90 bp GGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTATCACTCGTTCTTTTTaGCTTGGCATTGGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: GAFSISHTGSNQGNYLHSITRSF*LGIGFS
Trigger: TGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGAT...AGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR GCA 90 bp CCTGTCTTCCGGACCTGGAGGTATAGGAATAGTGTGAAACTATCGGGCCATTTCTTTTTAAATGCCTGTTaGAATGGCCTTGCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: PVFRTWRYRNSVKLSGHFFLNAC*NGLALC
Trigger: GCACAAAGCAAGGCCATTGCAACAGGCATTTAAAAA...GAAATGGCCCGATAGTTTCACACTATTCCTATACCTCCAGGTCCGGAAGACAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp GCAAAGTGGTTGATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGGTCACCAGGCTGGAGTaGAATGGCATGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: AKWLMCILRKNHSFFLPWVTRLE*NGMILA
Trigger: AGCCAAGATCATGCCATTGCACTCCAGCCTGGTGAC...CCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACATCAACCACTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp AAGTGCCAATTAAGTAGGATGAATTTATGTGGGAGGGTGAACACCTGCTCAAGCTCAGGTCTCTCCTGCTaGTATTCACATCACCTGACT +
Preference number: 4 (lower is better)
Translates to: KCQLSRMNLCGRVNTCSSSGLSC*YSHHLT
Trigger: AGTCAGGTGATGTGAATAGCAGCAGGAGAGACCTGA...GCTTGAGCAGGTGTTCACCCTCCCACATAAATTCATCCTACTTAATTGGCACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp GAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGGGCCTCTGGCTCCTCTGCCTCATTTTTaGCTTTCCAAATGTATAAGT +
Preference number: 4 (lower is better)
Translates to: ECVLKSLIVRLDNAGPLAPLPHF*LSKCIS
Trigger: ACTTATACATTTGGAAAGGCAAAAATGAGGCAGAGG...AGCCAGAGGCCCAGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGTTGAGCTTGGTGAGATaGCTGAAGGTGCCCTCGGCG +
Preference number: 4 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHELSLVR*LKVPSA
Trigger: CGCCGAGGGCACCTTCAGCCATCTCACCAAGCTCAA...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp ATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCAGATCGGGAGGAGGGTaGGACAGCGAATTACGTACA +
Preference number: 4 (lower is better)
Translates to: MCILRKNHSFFLPWHWVLRSGGG*DSELRT
Trigger: TGTACGTAATTCGCTGTCCCACCCTCCTCCCGATCT...GAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGGATCAGATGCGTACCTaGGAGATCGGGAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHEDQMRT*EIGRRV
Trigger: CACCCTCCTCCCGATCTCCCAGGTACGCATCTGATC...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp ATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCTGGCCTCTGAACAAATaGTGTCTTCTACCGCGCGGT +
Preference number: 4 (lower is better)
Translates to: MCILRKNHSFFLPWHWVLWPLNK*CLLPRG
Trigger: ACCGCGCGGTAGAAGACACCATTTGTTCAGAGGCCA...GAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp GCAAAGTGGTTGATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGGATAGGAGGCATGGGTaGTGGCCTCTGAACAAATGG +
Preference number: 4 (lower is better)
Translates to: AKWLMCILRKNHSFFLPWDRRHG*WPLNKW
Trigger: CCATTTGTTCAGAGGCCACCACCCATGCCTCCTATC...CCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACATCAACCACTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp AAAATATGCCTAACATTCATAACATGCTATATATACATGGGGTACCTCAGGCACTCGTCTGCTCATGGCTaGACGCTGTGTTGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: KICLTFITCYIYMGYLRHSSAHG*TLCCCR
Trigger: ACGGCAGCAACACAGCGTCCAGCCATGAGCAGACGA...GTGCCTGAGGTACCCCATGTATATATAGCATGTTATGAATGTTAGGCATATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp CTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTTACATGGAGTTGTCCTTCTTaGTGCCTGCCTCGCAATAAT +
Preference number: 4 (lower is better)
Translates to: LSAFPTQGQIRVTTSILTWSCPS*CLPRNN
Trigger: ATTATTGCGAGGCAGGCACCAAGAAGGACAACTCCA...TGTAAGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTAGACGATCTGAAAACTaGTTTCTGTCATCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLRRSEN*FLSSPG
Trigger: TCCTGGAGATGACAGAAACCAGTTTTCAGATCGTCT...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTGAACCGGCTTCCTCCTaGTGCTTTCAGCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVEPASS*CFQHFP
Trigger: TGGGAAATGCTGAAAGCACCAGGAGGAAGCCGGTTC...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp GCAAAGTGGTTGATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCTGAGTCACCTCATTTaGCCAGGCAGCATCAAGCTC +
Preference number: 4 (lower is better)
Translates to: AKWLMCILRKNHSFFLPWLSHLI*PGSIKL
Trigger: GAGCTTGATGCTGCCTGGCCAAATGAGGTGACTCAG...CCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACATCAACCACTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp ATGTGCACACACGAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGCCTCGTGTTCTGAATaGATGCTTCAATCACAGCAT +
Preference number: 4 (lower is better)
Translates to: MCTHECVLKSLIVRLDNAASCSE*MLQSQH
Trigger: ATGCTGTGATTGAAGCATCCATTCAGAACACGAGGC...AGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTCGTGTGTGCACAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTAACATTATTAATGAAATaGCCAAGAGGGGTTAGCAAA +
Preference number: 4 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLTLLMK*PRGVSK
Trigger: TTTGCTAACCCCTCTTGGCCATTTCATTAATAATGT...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATACTCAGCCTAGTGTTTaGAACAGAGTAGGAGGACAT +
Preference number: 4 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDTQPSV*NRVGGH
Trigger: ATGTCCTCCTACTCTGTTCCAAACACTAGGCTGAGT...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp ATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCAAGCAACTGACAGAGTaGCTCTTCCCCTGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: MCILRKNHSFFLPWHWVLKQLTE*LFPCSW
Trigger: CCAGCTACAGGGGAAGAGCCACTCTGTCAGTTGCTT...GAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp CTGGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTAAATTGGCAGGTCAGTaGTTGAAGCAGGATTCCAAA +
Preference number: 4 (lower is better)
Translates to: LVLSAFPTQGQIRVTTSIKLAGQ*LKQDSK
Trigger: TTTGGAATCCTGCTTCAACCACTGACCTGCCAATTT...AATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp GGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTTTGTGTGTTATCCCATaGCACCTCATCTTCCCAATT +
Preference number: 4 (lower is better)
Translates to: GAFSISHTGSNQGNYLHSLCVIP*HLIFPI
Trigger: AATTGGGAAGATGAGGTGCCATGGGATAACACACAA...AGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp ATGTGCACACACGAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTCCAGAAGGCTCCCAGTaGCTTTCCTATGAATTAAAC +
Preference number: 4 (lower is better)
Translates to: MCTHECVLKSLIVRLDNAPEGSQ*LSYELN
Trigger: GTTTAATTCATAGGAAAGCCACTGGGAGCCTTCTGG...AGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTCGTGTGTGCACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp TTCGATTATCTTTTACTCCTGTCAAGATTTTGTCAACTTAACGAGAAGGCATGCCGTGAGGAGGGTGGCTaGGGAAAAGGACAGCTTGAC +
Preference number: 4 (lower is better)
Translates to: FDYLLLLSRFCQLNEKACREEGG*GKGQLD
Trigger: GTCAAGCTGTCCTTTTCCCCAGCCACCCTCCTCACG...GCATGCCTTCTCGTTAAGTTGACAAAATCTTGACAGGAGTAAAAGATAATCGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTAAAAAGTGATGTTGTATaGGTCACCATAATAATGTCC +
Preference number: 4 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLKSDVV*VTIIMS
Trigger: GGACATTATTATGGTGACCCATACAACATCACTTTT...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp ATGTGCACACACGAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTCATGCTATATATACATaGGGTACCTCAGGCACCTTC +
Preference number: 4 (lower is better)
Translates to: MCTHECVLKSLIVRLDNAHAIYT*GTSGTF
Trigger: GAAGGTGCCTGAGGTACCCCATGTATATATAGCATG...AGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTCGTGTGTGCACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTATTATTTGTTCTCATGTaGTTAAAGGCAACTTCCACT +
Preference number: 4 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLLFVLM*LKATST
Trigger: AGTGGAAGTTGCCTTTAACCACATGAGAACAAATAA...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp GGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTACCAAAGTGACTCTGTaGCTGAGTGCTCTTAATAGT +
Preference number: 4 (lower is better)
Translates to: GAFSISHTGSNQGNYLHSTKVTL*LSALNS
Trigger: ACTATTAAGAGCACTCAGCCACAGAGTCACTTTGGT...AGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 72 bp GGGAGGGGAATAAATCAGGAACTACCTCTTAAACTGTaGCGTCCAAGGACGTACTACTGTAGTCCTTATCCA +
Preference number: 4 (lower is better)
Translates to: GRGINQELPLKL*RPRTYYCSPYP
Trigger: TGGATAAGGACTACAGTAGTACGTCCTTGGACGCAACAGTTTAAGAGGTAGTTCCTGATTTATTCCCCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp ATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTGTAGCTCAATCTGCAATCTaGCGGCTGCGTCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: ILRKNHSFFLPWHWVLIVAQSAI*RLRLLL
Trigger: AAGGAGAAGACGCAGCCGTCAGATTGCAGATTGAGC...TACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp TCAGCTGACATAACAGAACCACTGATCAGTTGTTTTTGTCTAAATAGCAGGAAGGGTTATTCCGAGCAGTaGGCTGCTTCAGGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: SADITEPLISCFCLNSRKGYSEQ*AASGWR
Trigger: TCTCCAACCTGAAGCAGCTCACTGCTCGGAATAACC...CTTCCTGCTATTTAGACAAAAACAACTGATCAGTGGTTCTGTTATGTCAGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp ATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTGTAGGTTATTCCGAGCAGTaGGCTGCTTCAGGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: ILRKNHSFFLPWHWVLIVGYSEQ*AASGWR
Trigger: TCTCCAACCTGAAGCAGCTCACTGCTCGGAATAACC...TACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp TTGCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTGTCTTACTGCTACACTaGTCACCTTCACAGACTCTT +
Preference number: 4 (lower is better)
Translates to: LPWHWVLIVQPCTVLQQLVLLLH*SPSQTL
Trigger: AAGAGTCTGTGAAGGTGATCAGTGTAGCAGTAAGAC...AAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp CAGGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGATGGTCTTGATTTCTTaGCCTCGTGATCTGCCCACC +
Preference number: 4 (lower is better)
Translates to: QEFILTASTAKWLMCILRMVLIS*PRDLPT
Trigger: GGTGGGCAGATCACGAGGTCAAGAAATCAAGACCAT...CCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp ATGTGCACACACGAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTAATGATACCTTAATCTaGGTCCCAAGGACCACTTTC +
Preference number: 4 (lower is better)
Translates to: MCTHECVLKSLIVRLDNANDTLI*VPRTTF
Trigger: GAAAGTGGTCCTTGGGACTCAGATTAAGGTATCATT...AGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTCGTGTGTGCACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp CTGGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTGCTAGTAACTTTAAATaGGTCTTCACACCAACACTG +
Preference number: 4 (lower is better)
Translates to: LVLSAFPTQGQIRVTTSIASNFK*VFTPTL
Trigger: CAGTGTTGGTGTGAAGACTCATTTAAAGTTACTAGC...AATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTCTTCCAGCAAATCCCTaGGAAAACCTGTGGGATCCT +
Preference number: 4 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVLPANP*ENLWDP
Trigger: AGGATCCCACAGGTTTTCTCAGGGATTTGCTGGAAG...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp GCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTGGATCATTACTCCACTaGTTGCCTTACTGTCCTGAT +
Preference number: 4 (lower is better)
Translates to: ALALGSHCTTLYSTSATFGSLLH*LPYCPD
Trigger: ATCAGGACAGTAAGGCAATCAGTGGAGTAATGATCC...AAAAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp CCTGTCTTCCGGACCTGGAGGTATAGGAATAGTGTGAAACTATCGGGCCATTTCCTCATCATAAAATTCTaGAGCAATCACATTGGTCAC +
Preference number: 4 (lower is better)
Translates to: PVFRTWRYRNSVKLSGHFLIIKF*SNHIGH
Trigger: GTGACCAATGTGATTGCTTCAGAATTTTATGATGAG...GAAATGGCCCGATAGTTTCACACTATTCCTATACCTCCAGGTCCGGAAGACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTGAAATGGCAAGCATGTaGAAGTGGAAACTCACATTT +
Preference number: 4 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLEMASM*KWKLTF
Trigger: AAATGTGAGTTTCCACTTTCACATGCTTGCCATTTC...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp TTCGATTATCTTTTACTCCTGTCAAGATTTTGTCAACTTAACGAGAAGGCATGCCCAAGGTGGCTTTGGTaGAGGAGACAGTTCGCTTGG +
Preference number: 4 (lower is better)
Translates to: FDYLLLLSRFCQLNEKACPRWLW*RRQFAW
Trigger: CCAAGCGAACTGTCTCCTTCACCAAAGCCACCTTGG...GCATGCCTTCTCGTTAAGTTGACAAAATCTTGACAGGAGTAAAAGATAATCGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp GCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTAGCACAGAGGTTAAGTaGCACAACCAAAGTGACTCT +
Preference number: 4 (lower is better)
Translates to: ALALGSHCTTLYSTSATFSTEVK*HNQSDS
Trigger: AGAGTCACTTTGGTTGTGTCACTTAACCTCTGTGCT...AAAAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp GGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAACTGCAATCTGACGGCTaGGTCTTCTCCTTGCAATGG +
Preference number: 4 (lower is better)
Translates to: GIYSDSFNSKVVDVYPKELQSDG*VFSLQW
Trigger: CCATTGCAAGGAGAAGACGCAGCCGTCAGATTGCAG...TTCCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp TCAGCTGACATAACAGAACCACTGATCAGTTGTTTTTGTCTAAATAGCAGGAAGTGGACGCTGTGTTGCTaGCGTTGTTCAGATAGGAGG +
Preference number: 4 (lower is better)
Translates to: SADITEPLISCFCLNSRKWTLCC*RCSDRR
Trigger: CCTCCTATCTGAACAACGGCAGCAACACAGCGTCCA...CTTCCTGCTATTTAGACAAAAACAACTGATCAGTGGTTCTGTTATGTCAGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp TCAGCTGACATAACAGAACCACTGATCAGTTGTTTTTGTCTAAATAGCAGGAAGCTGGCACGCTGCTGTTaGAGTATCGCATGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: SADITEPLISCFCLNSRKLARCC*SIACCW
Trigger: CCAACAACATGCGATACTGCAACAGCAGCGTGCCAG...CTTCCTGCTATTTAGACAAAAACAACTGATCAGTGGTTCTGTTATGTCAGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGCCAGGTCTGGCACGCTaGTGTTGCAGTATCGCATGT +
Preference number: 4 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHEPGLAR*CCSIAC
Trigger: ACATGCGATACTGCAACAGCAGCGTGCCAGACCTGG...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR GCA 90 bp ACGAGCTCTAACTCTAGACTTGGAGGCAGTGAGGTGATCAGAACAAGCTATTTTTTAGCCCTCCACAATTaGCAAAGTAGAGGAACATCC +
Preference number: 4 (lower is better)
Translates to: TSSNSRLGGSEVIRTSYFLALHN*QSRGTS
Trigger: GGATGTTCCTCTACTTTGGCAATTGTGGAGGGCTAA...AAAATAGCTTGTTCTGATCACCTCACTGCCTCCAAGTCTAGAGTTAGAGCTCGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp GAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGGGCCTCTGGCTTCTACGACATACAGCTaGAGTTATATTTTCTGCTTA +
Preference number: 4 (lower is better)
Translates to: ECVLKSLIVRLDNAGPLASTTYS*SYIFCL
Trigger: TAAGCAGAAAATATAACTGCAGCTGTATGTCGTAGA...AGCCAGAGGCCCAGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp CTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTTACAACACACACTTGGCAATaGCTTCACCTTGCCTTAAAC +
Preference number: 4 (lower is better)
Translates to: LSAFPTQGQIRVTTSILTTHTWQ*LHLALN
Trigger: GTTTAAGGCAAGGTGAAGGCATTGCCAAGTGTGTGT...TGTAAGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGGGGCATGGTGTCCTCTaGCTGTACTCCCAGCACTTT +
Preference number: 4 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHEGHGVL*LYSQHF
Trigger: AAAGTGCTGGGAGTACAGGCAGAGGACACCATGCCC...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp CAGGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGCTGTGTCTCCTAATTTaGTTCTGGCTCCCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: QEFILTASTAKWLMCILRLCLLI*FWLPEG
Trigger: GCCTTCTGGGAGCCAGAAGCAAATTAGGAGACACAG...CCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATAGTCTGGCTTCAATTTaGCAAACCTGCATCTTTCCT +
Preference number: 4 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDSLASI*QTCIFP
Trigger: AGGAAAGATGCAGGTTTGGCAAATTGAAGCCAGACT...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp GGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTCAGTTGCATTGGAGATaGCATAGCTCAGTTGAATTT +
Preference number: 4 (lower is better)
Translates to: GAFSISHTGSNQGNYLHSQLHWR*HSSVEF
Trigger: AAATTCAACTGAGCTATGGCATCTCCAATGCAACTG...AGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTAGGGACTCTGGGAAATaGACATGTGGGCTTACAGCT +
Preference number: 4 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVRDSGK*TCGLTA
Trigger: AGCTGTAAGCCCACATGTGCATTTCCCAGAGTCCCT...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp AAGTGCCAATTAAGTAGGATGAATTTATGTGGGAGGGTGAACACCTGCTCAAGCCACAAAGATGGCCTCTaGCTCATTTTTGCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: KCQLSRMNLCGRVNTCSSHKDGL*LIFAFP
Trigger: TGGAAAGGCAAAAATGAGGCAGAGGCCATCTTTGTG...GCTTGAGCAGGTGTTCACCCTCCCACATAAATTCATCCTACTTAATTGGCACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp GCAAAGTGGTTGATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGGTCTTCTCCTTGCAATaGGCTCATCCGAATCCGACA +
Preference number: 4 (lower is better)
Translates to: AKWLMCILRKNHSFFLPWVFSLQ*AHPNPT
Trigger: TGTCGGATTCGGATGAGCCCATTGCAAGGAGAAGAC...CCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACATCAACCACTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp GGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTAGCCTACGAACTTCTTaGTTAAGCTCAATCTGCAAT +
Preference number: 4 (lower is better)
Translates to: GAFSISHTGSNQGNYLHSSLRTS*LSSICN
Trigger: ATTGCAGATTGAGCTTAACCAAGAAGTTCGTAGGCT...AGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAACAACACAAGCCCAAGTaGGCAGGCAGAACTCTCTTC +
Preference number: 4 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKQHKPK*AGRTLF
Trigger: GAAGAGAGTTCTGCCTGCCCACTTGGGCTTGTGTTG...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp ATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTGTATCAAGCTTCAAGAGCTaGGCAAGAGCAGCCCGTGAA +
Preference number: 4 (lower is better)
Translates to: ILRKNHSFFLPWHWVLIVSSFKS*ARAARE
Trigger: TTCACGGGCTGCTCTTGCCCAGCTCTTGAAGCTTGA...TACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp TCAGCTGACATAACAGAACCACTGATCAGTTGTTTTTGTCTAAATAGCAGGAAGACTTGTTCAGGACCTTaGCACATGAAACCCCGCACG +
Preference number: 4 (lower is better)
Translates to: SADITEPLISCFCLNSRKTCSGP*HMKPRT
Trigger: CGTGCGGGGTTTCATGTGCCAAGGTCCTGAACAAGT...CTTCCTGCTATTTAGACAAAAACAACTGATCAGTGGTTCTGTTATGTCAGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp TGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTGCTTCTGCTAGGGTTTaGAATAGAGAGGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: CILRKNHSFFLPWHWVLIASARV*NREGGR
Trigger: CCTCCCACCCTCTCTATTCCAAACCCTAGCAGAAGC...AATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAACGATGTGGTAGGAGTTaGAGGCGTGTAGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKRCGRS*RRVASA
Trigger: AGCAGAAGCTACACGCCTCCAACTCCTACCACATCG...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp CTGGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTTCGTTCTTTTTGCCTTaGCATTGGGTTCTCATTGTA +
Preference number: 4 (lower is better)
Translates to: LVLSAFPTQGQIRVTTSISFFLP*HWVLIV
Trigger: TACAATGAGAACCCAATGCCAAGGCAAAAAGAACGA...AATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp ATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCCCTGTCTTCCGGACCTaGAGGTATAGGAATAGTGTG +
Preference number: 4 (lower is better)
Translates to: MCILRKNHSFFLPWHWVLPVFRT*RYRNSV
Trigger: CACACTATTCCTATACCTCCAGGTCCGGAAGACAGG...GAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp TTGCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTCATGGAAGAGCAGACTaGGGGAAATTTGCTGTCATT +
Preference number: 4 (lower is better)
Translates to: LPWHWVLIVQPCTVLQQLHGRAD*GKFAVI
Trigger: AATGACAGCAAATTTCCCCCAGTCTGCTCTTCCATG...AAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp GCAAAGTGGTTGATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGATATGGCAGGAATGGTaGGTCCACCCTCAAAGCTAC +
Preference number: 4 (lower is better)
Translates to: AKWLMCILRKNHSFFLPWIWQEW*VHPQSY
Trigger: GTAGCTTTGAGGGTGGACCCACCATTCCTGCCATAT...CCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACATCAACCACTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp ATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTGTACCTACCCAAGGAATATaGCAGGAATGGTGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: ILRKNHSFFLPWHWVLIVPTQGI*QEWWVH
Trigger: GTGGACCCACCATTCCTGCCATATTCCTTGGGTAGG...TACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp TGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTAATATTAGCCAGGCGTaGTGGCAGGAGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: CILRKNHSFFLPWHWVLINISQA*WQEPVV
Trigger: GACTACAGGCTCCTGCCACCACGCCTGGCTAATATT...AATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp ACGAGCTCTAACTCTAGACTTGGAGGCAGTGAGGTGATCAGAACAAGCTATTTTGTTTGCCACACTATGTaGCCTATGTTCTACTCAAGG +
Preference number: 4 (lower is better)
Translates to: TSSNSRLGGSEVIRTSYFVCHTM*PMFYSR
Trigger: CCTTGAGTAGAACATAGGCCACATAGTGTGGCAAAC...AAAATAGCTTGTTCTGATCACCTCACTGCCTCCAAGTCTAGAGTTAGAGCTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATATAATCACTCTGAGCTaGTTGGGTAAGCTCATTGCA +
Preference number: 4 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDIITLS*LGKLIA
Trigger: TGCAATGAGCTTACCCAACCAGCTCAGAGTGATTAT...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp CCTGTCTTCCGGACCTGGAGGTATAGGAATAGTGTGAAACTATCGGGCCATTTCAAGCCACTCAGTCTATaGTATTTTTGTTACAGCAGT +
Preference number: 4 (lower is better)
Translates to: PVFRTWRYRNSVKLSGHFKPLSL*YFCYSS
Trigger: ACTGCTGTAACAAAAATACCATAGACTGAGTGGCTT...GAAATGGCCCGATAGTTTCACACTATTCCTATACCTCCAGGTCCGGAAGACAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp TTGCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTAGGGAGCACATTTTGTaGGCAGCATCTACACTTTCA +
Preference number: 4 (lower is better)
Translates to: LPWHWVLIVQPCTVLQQLREHIL*AASTLS
Trigger: TGAAAGTGTAGATGCTGCCCACAAAATGTGCTCCCT...AAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp GAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGGGCCTCTGGCTGTGACTGCTCACACATaGTTTAAAATCTATTCATTC +
Preference number: 4 (lower is better)
Translates to: ECVLKSLIVRLDNAGPLAVTAHT*FKIYSF
Trigger: GAATGAATAGATTTTAAACCATGTGTGAGCAGTCAC...AGCCAGAGGCCCAGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 72 bp GATGTTGTCCTCCCTGGTGGGGAAGGAAGTTCTGATTaGTGTGAAATGACTAAGACCATTATGATAGGTGCT +
Preference number: 4 (lower is better)
Translates to: DVVLPGGEGSSD*CEMTKTIMIGA
Trigger: AGCACCTATCATAATGGTCTTAGTCATTTCACACAAATCAGAACTTCCTTCCCCACCAGGGAGGACAACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 72 bp GCAGGTGTGATTCCAGCGGCTTTGGAAGAGAGGTCTTaGACTTGTATCTTAAAGGACAAATATGTCATCAGG +
Preference number: 4 (lower is better)
Translates to: AGVIPAALEERS*TCILKDKYVIR
Trigger: CCTGATGACATATTTGTCCTTTAAGATACAAGTCAAAGACCTCTCTTCCAAAGCCGCTGGAATCACACCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 72 bp CCAGCCTCACACTTTCACATAATAACGGGTCTATTGTaGGAGGAATTCAAGACAGCCTTGAGAAGAAGTGTG +
Preference number: 4 (lower is better)
Translates to: PASHFHIITGLL*EEFKTALRRSV
Trigger: CACACTTCTTCTCAAGGCTGTCTTGAATTCCTCCAACAATAGACCCGTTATTATGTGAAAGTGTGAGGCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 72 bp TGTGGCCTATGTTCTACTCAAGGGGCTCAAATCTCTTaGCAGAGATGCTCGACTCTAATAGCAAAGACTGAA +
Preference number: 4 (lower is better)
Translates to: CGLCSTQGAQIS*QRCSTLIAKTE
Trigger: TTCAGTCTTTGCTATTAGAGTCGAGCATCTCTGCAAAGAGATTTGAGCCCCTTGAGTAGAACATAGGCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 72 bp GGATTCCACCAACCCCACTTAAACAGGGAGCACATTTaGTGGGCAGCATCTACACTTTCATCTCTATCTAAA +
Preference number: 4 (lower is better)
Translates to: GFHQPHLNREHI*WAASTLSSLSK
Trigger: TTTAGATAGAGATGAAAGTGTAGATGCTGCCCACAAAATGTGCTCCCTGTTTAAGTGGGGTTGGTGGAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 72 bp ACCTCAACTTCCCTTGACACTCATGTCTTAGCAAACTaGCTAATCAAACCAGCAACACAAAGATGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: TSTSLDTHVLAN*LIKPATQRWPL
Trigger: CAGAGGCCATCTTTGTGTTGCTGGTTTGATTAGCAAGTTTGCTAAGACATGAGTGTCAAGGGAAGTTGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGGAGTTTGGACACCTGTaGGTAGAGCCCCAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHEEFGHL*VEPQGN
Trigger: ATTTCCCTGGGGCTCTACTCACAGGTGTCCAAACTC...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTGGCAAGAGCAGCCCGTaGAATGGTCTGAATATTGTT +
Preference number: 4 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVGKSSP*NGLNIV
Trigger: AACAATATTCAGACCATTTCACGGGCTGCTCTTGCC...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp TGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTTCATATTTAATTCCCTaGCGGCCATCCCCCGGACTT +
Preference number: 4 (lower is better)
Translates to: CILRKNHSFFLPWHWVLISYLIP*RPSPGL
Trigger: AAGTCCGGGGGATGGCCGTCAGGGAATTAAATATGA...AATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp TTGCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTGGTATAGGAATAGTGTaGAACTATCGGGCCATTTCT +
Preference number: 4 (lower is better)
Translates to: LPWHWVLIVQPCTVLQQLGIGIV*NYRAIS
Trigger: AGAAATGGCCCGATAGTTTCACACTATTCCTATACC...AAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAAGTCTCAGAGGATGTGTaGTGCAGAATCTTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKVSEDV*CRIFQP
Trigger: GGGCTGAAAGATTCTGCATCACACATCCTCTGAGAC...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp GGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTATTATTCCTTTAGATTaGGTTCCATCGTGGTGCTTA +
Preference number: 4 (lower is better)
Translates to: GAFSISHTGSNQGNYLHSIIPLD*VPSWCL
Trigger: TAAGCACCACGATGGAACTCAATCTAAAGGAATAAT...AGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp AAGTGCCAATTAAGTAGGATGAATTTATGTGGGAGGGTGAACACCTGCTCAAGCTGCCCTAATAGATTGTaGCATACGTGCTTTTTCAGC +
Preference number: 4 (lower is better)
Translates to: KCQLSRMNLCGRVNTCSSCPNRL*HTCFFS
Trigger: GCTGAAAAAGCACGTATGTCACAATCTATTAGGGCA...GCTTGAGCAGGTGTTCACCCTCCCACATAAATTCATCCTACTTAATTGGCACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp ATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCCTAAGATCAGGAGTTTaGGACCAGCCTGGCCATATT +
Preference number: 4 (lower is better)
Translates to: MCILRKNHSFFLPWHWVLLRSGV*DQPGHI
Trigger: AATATGGCCAGGCTGGTCTCAAACTCCTGATCTTAG...GAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp ATGTGCACACACGAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTACATATATAGTGGTTTaGAGGAACTTGAGATCCCAG +
Preference number: 4 (lower is better)
Translates to: MCTHECVLKSLIVRLDNATYIVV*RNLRSQ
Trigger: CTGGGATCTCAAGTTCCTTCAAACCACTATATATGT...AGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTCGTGTGTGCACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp TCAGCTGACATAACAGAACCACTGATCAGTTGTTTTTGTCTAAATAGCAGGAAGTGCACTCCAATCTGGTaGCAGAGTGAGACTCCAACT +
Preference number: 4 (lower is better)
Translates to: SADITEPLISCFCLNSRKCTPIW*QSETPT
Trigger: AGTTGGAGTCTCACTCTGTCACCAGATTGGAGTGCA...CTTCCTGCTATTTAGACAAAAACAACTGATCAGTGGTTCTGTTATGTCAGCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp GCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTCAAAAAGTAACCACATaGCAGGTGGTAGACTATTGC +
Preference number: 4 (lower is better)
Translates to: ALALGSHCTTLYSTSATFQKVTT*QVVDYC
Trigger: GCAATAGTCTACCACCTGTCATGTGGTTACTTTTTG...AAAAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp ATGTGCACACACGAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTAATGCCAGTACCCATTaGTACTACTTGCCAAATAAC +
Preference number: 4 (lower is better)
Translates to: MCTHECVLKSLIVRLDNANASTH*YYLPNN
Trigger: GTTATTTGGCAAGTAGTATCAATGGGTACTGGCATT...AGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTCGTGTGTGCACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp ATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTGTACAGGGCAACAGTGAATaGGAGTCATCACTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: ILRKNHSFFLPWHWVLIVQGNSE*ESSLSQ
Trigger: CTGGGAAAGTGATGACTCTCATTCACTGTTGCCCTG...TACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp AAGTGCCAATTAAGTAGGATGAATTTATGTGGGAGGGTGAACACCTGCTCAAGCGAAAACAGCCTGATTTaGAATCCTAAGCCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: KCQLSRMNLCGRVNTCSSENSLI*NPKPCV
Trigger: AACACAGGGCTTAGGATTTCAAATCAGGCTGTTTTC...GCTTGAGCAGGTGTTCACCCTCCCACATAAATTCATCCTACTTAATTGGCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp GCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTAATGCTCTGGGTTTCTaGTATTTCTCACTCAATGCC +
Preference number: 4 (lower is better)
Translates to: ALALGSHCTTLYSTSATFNALGF*YFSLNA
Trigger: GGCATTGAGTGAGAAATATCAGAAACCCAGAGCATT...AAAAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp TTGCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTGGAGGCAGTGAGGTaGTCAGAACAAGCTATTTTA +
Preference number: 4 (lower is better)
Translates to: LPWHWVLIVQPCTVLQQLLEAVR*SEQAIL
Trigger: TAAAATAGCTTGTTCTGATCACCTCACTGCCTCCAA...AAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp TGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTTCCACTGCTGCACCTTaGATCTGGGAATTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: CILRKNHSFFLPWHWVLISTAAP*IWELCE
Trigger: CTCACACAATTCCCAGATTCAAGGTGCAGCAGTGGA...AATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTTCTCCTTATTACCAATaGTCCAAATTGTATCCATGC +
Preference number: 4 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLSPYYQ*SKLYPC
Trigger: GCATGGATACAATTTGGATCATTGGTAATAAGGAGA...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp AAGTGCCAATTAAGTAGGATGAATTTATGTGGGAGGGTGAACACCTGCTCAAGCTCAGGCAACTTGTGGTaGATGATAACAGTGACTCTT +
Preference number: 4 (lower is better)
Translates to: KCQLSRMNLCGRVNTCSSSGNLW*MITVTL
Trigger: AAGAGTCACTGTTATCATTCACCACAAGTTGCCTGA...GCTTGAGCAGGTGTTCACCCTCCCACATAAATTCATCCTACTTAATTGGCACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp TCAGCTGACATAACAGAACCACTGATCAGTTGTTTTTGTCTAAATAGCAGGAAGAGAAGGAGGTTGCATTaGGCCAAGATTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: SADITEPLISCFCLNSRKRRRLH*AKIVPL
Trigger: CAGTGGCACAATCTTGGCTCAATGCAACCTCCTTCT...CTTCCTGCTATTTAGACAAAAACAACTGATCAGTGGTTCTGTTATGTCAGCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp AAAATATGCCTAACATTCATAACATGCTATATATACATGGGGTACCTCAGGCACGGCAGGAGAATTCCTTaGACCTGGGAGAAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: KICLTFITCYIYMGYLRHGRRIP*TWEKEV
Trigger: AACCTCCTTCTCCCAGGTTCAAGGAATTCTCCTGCC...GTGCCTGAGGTACCCCATGTATATATAGCATGTTATGAATGTTAGGCATATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTCCCAGTTCCATCCCTTaGGTTTTAAACACATATAAT +
Preference number: 4 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLPSSIP*VLNTYN
Trigger: ATTATATGTGTTTAAAACTCAAGGGATGGAACTGGG...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp GCAAAGTGGTTGATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGGTACAAGAGCACATCTaGGTGATTGCTCTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: AKWLMCILRKNHSFFLPWVQEHI*VIALWE
Trigger: TTCCCAGAGAGCAATCACTCAGATGTGCTCTTGTAC...CCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACATCAACCACTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp ATGTGCACACACGAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTTTCCTAGTGTTGTTTTaGGTCCCATGTTTTACACAG +
Preference number: 4 (lower is better)
Translates to: MCTHECVLKSLIVRLDNAFLVLF*VPCFTQ
Trigger: CTGTGTAAAACATGGGACTCAAAACAACACTAGGAA...AGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTCGTGTGTGCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp TGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTTCCATCCATGTTCAATaGCTTGACGTAGAGCCTCCG +
Preference number: 4 (lower is better)
Translates to: CILRKNHSFFLPWHWVLISIHVQ*LDVEPP
Trigger: CGGAGGCTCTACGTCAAGTCATTGAACATGGATGGA...AATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp TTCGATTATCTTTTACTCCTGTCAAGATTTTGTCAACTTAACGAGAAGGCATGCGCTGCGTCTTCTCCTTaGAATGGGCTCATCCGAATC +
Preference number: 4 (lower is better)
Translates to: FDYLLLLSRFCQLNEKACAASSP*NGLIRI
Trigger: GATTCGGATGAGCCCATTGCAAGGAGAAGACGCAGC...GCATGCCTTCTCGTTAAGTTGACAAAATCTTGACAGGAGTAAAAGATAATCGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp ATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTCGTCCAGTTGGTTaGCATACAGGTAGACCGTGT +
Preference number: 4 (lower is better)
Translates to: MCILRKNHSFFLPWHWVLIRPVG*HTGRPC
Trigger: ACACGGTCTACCTGTATGGCAACCAACTGGACGAAT...GAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR GCA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGTGGACGCTGTGTTGCTaGCGTTGTTCAGATAGGAGG +
Preference number: 4 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHEWTLCC*RCSDRR
Trigger: CCTCCTATCTGAACAACGGCAGCAACACAGCGTCCA...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR GCA 90 bp AAGTGCCAATTAAGTAGGATGAATTTATGTGGGAGGGTGAACACCTGCTCAAGCATCACTCGTTCTTTTTaGCTTGGCATTGGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: KCQLSRMNLCGRVNTCSSITRSF*LGIGFS
Trigger: TGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGAT...GCTTGAGCAGGTGTTCACCCTCCCACATAAATTCATCCTACTTAATTGGCACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp GCAAAGTGGTTGATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCCATTCCCTGTGGACTaGAATATTGCCTCGTGTTCT +
Preference number: 4 (lower is better)
Translates to: AKWLMCILRKNHSFFLPWPFPVD*NIASCS
Trigger: AGAACACGAGGCAATATTGCAGTCCACAGGGAATGG...CCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACATCAACCACTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp CCTGTCTTCCGGACCTGGAGGTATAGGAATAGTGTGAAACTATCGGGCCATTTCAGTCATGAGCAAAACTaGTATTCTCATGTTCTAAAG +
Preference number: 4 (lower is better)
Translates to: PVFRTWRYRNSVKLSGHFSHEQN*YSHVLK
Trigger: CTTTAGAACATGAGAATAGCAGTTTTGCTCATGACT...GAAATGGCCCGATAGTTTCACACTATTCCTATACCTCCAGGTCCGGAAGACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp GGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAATGGGGCACTGTTTTCTaGTTTGCTTTCCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: GIYSDSFNSKVVDVYPKEWGTVF*FAFPCS
Trigger: GCTGCATGGGAAAGCAAAGCAGAAAACAGTGCCCCA...TTCCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp GCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTTACCTCTTTTATTCCTaGCCTCCTGCGTCATTTCTT +
Preference number: 4 (lower is better)
Translates to: ALALGSHCTTLYSTSATFYLFYS*PPASFL
Trigger: AAGAAATGACGCAGGAGGGCAGGAATAAAAGAGGTA...AAAAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp AAGTGCCAATTAAGTAGGATGAATTTATGTGGGAGGGTGAACACCTGCTCAAGCAAGGATGGACAGATGTaGTATAAATTCTGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: KCQLSRMNLCGRVNTCSSKDGQM*YKFCGR
Trigger: TCTGCCGCAGAATTTATAGCACATCTGTCCATCCTT...GCTTGAGCAGGTGTTCACCCTCCCACATAAATTCATCCTACTTAATTGGCACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp ACGAGCTCTAACTCTAGACTTGGAGGCAGTGAGGTGATCAGAACAAGCTATTTTAGGCATGAGCCACTGTaGTCAGCTTATCTTGATTTT +
Preference number: 4 (lower is better)
Translates to: TSSNSRLGGSEVIRTSYFRHEPL*SAYLDF
Trigger: AAAATCAAGATAAGCTGAGCACAGTGGCTCATGCCT...AAAATAGCTTGTTCTGATCACCTCACTGCCTCCAAGTCTAGAGTTAGAGCTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp CTGGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTTTCCTACCATGTCTATaGCATGGTGATTCTTATATG +
Preference number: 4 (lower is better)
Translates to: LVLSAFPTQGQIRVTTSIFLPCL*HGDSYM
Trigger: CATATAAGAATCACCATGGCATAGACATGGTAGGAA...AATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp CAGGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAGACTGGGGGAAATTTaGTGTCATTGCAGGAGCATG +
Preference number: 4 (lower is better)
Translates to: QEFILTASTAKWLMCILRRLGEI*CHCRSM
Trigger: CATGCTCCTGCAATGACAGCAAATTTCCCCCAGTCT...CCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp GGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAACATCGCAATGGCCCGTaGTCCAAACTCTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: GIYSDSFNSKVVDVYPKEHRNGP*SKLFHF
Trigger: GAAATGGAAGAGTTTGGAGCACGGGCCATTGCGATG...TTCCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp GCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTGTCATCAGGAAGTGTTaGCTGGAGAAAAAGACAGAA +
Preference number: 4 (lower is better)
Translates to: ALALGSHCTTLYSTSATFVIRKC*LEKKTE
Trigger: TTCTGTCTTTTTCTCCAGGCAACACTTCCTGATGAC...AAAAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp GGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTCATTACTCCACTGATTaGCTTACTGTCCTGATAAAA +
Preference number: 4 (lower is better)
Translates to: GAFSISHTGSNQGNYLHSHYSTD*LTVLIK
Trigger: TTTTATCAGGACAGTAAGGCAATCAGTGGAGTAATG...AGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp AAGTGCCAATTAAGTAGGATGAATTTATGTGGGAGGGTGAACACCTGCTCAAGCAAACCACAACCACTCTaGTGCAACTGGACTAAATGT +
Preference number: 4 (lower is better)
Translates to: KCQLSRMNLCGRVNTCSSKPQPL*CNWTKC
Trigger: ACATTTAGTCCAGTTGCAGCAGAGTGGTTGTGGTTT...GCTTGAGCAGGTGTTCACCCTCCCACATAAATTCATCCTACTTAATTGGCACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp TCAGCTGACATAACAGAACCACTGATCAGTTGTTTTTGTCTAAATAGCAGGAAGGTCTTCTCCTTGCAATaGGCTCATCCGAATCCGACA +
Preference number: 4 (lower is better)
Translates to: SADITEPLISCFCLNSRKVFSLQ*AHPNPT
Trigger: TGTCGGATTCGGATGAGCCCATTGCAAGGAGAAGAC...CTTCCTGCTATTTAGACAAAAACAACTGATCAGTGGTTCTGTTATGTCAGCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp CAGGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAAGCTCGTGAGATTCTaGAAGGCCATGTCGGATATG +
Preference number: 4 (lower is better)
Translates to: QEFILTASTAKWLMCILRKLVRF*KAMSDM
Trigger: CATATCCGACATGGCCTTCCAGAATCTCACGAGCTT...CCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp ATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCTCCGCAGTTGGTTGTTaGATATATCCAGCCGTTCCA +
Preference number: 4 (lower is better)
Translates to: MCILRKNHSFFLPWHWVLSAVGC*IYPAVP
Trigger: TGGAACGGCTGGATATATCCAACAACCAACTGCGGA...GAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp TGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTCCCCCTACTAAACTGTaGCCCATTTTCACCCATGTG +
Preference number: 4 (lower is better)
Translates to: CILRKNHSFFLPWHWVLIPPTKL*PIFTHV
Trigger: CACATGGGTGAAAATGGGCCACAGTTTAGTAGGGGG...AATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp AAAATATGCCTAACATTCATAACATGCTATATATACATGGGGTACCTCAGGCACGATAGGAGGCATGGGTaGTGGCCTCTGAACAAATGG +
Preference number: 4 (lower is better)
Translates to: KICLTFITCYIYMGYLRHDRRHG*WPLNKW
Trigger: CCATTTGTTCAGAGGCCACCACCCATGCCTCCTATC...GTGCCTGAGGTACCCCATGTATATATAGCATGTTATGAATGTTAGGCATATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAACCTGTCTTCCGGACCTaGAGGTATAGGAATAGTGTG +
Preference number: 4 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKPVFRT*RYRNSV
Trigger: CACACTATTCCTATACCTCCAGGTCCGGAAGACAGG...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATAAGCAAAGACACCAATaGGAATTAACCCCTTCACTT +
Preference number: 4 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDKQRHQ*ELTPSL
Trigger: AAGTGAAGGGGTTAATTCCCATTGGTGTCTTTGCTT...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp GGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAACTGAATGCTCATTCCTaGGGCTCTTTTGACACCCAC +
Preference number: 4 (lower is better)
Translates to: GIYSDSFNSKVVDVYPKELNAHS*GSFDTH
Trigger: GTGGGTGTCAAAAGAGCCCCAGGAATGAGCATTCAG...TTCCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGGGAATATGGCAGGAATaGTGGGTCCACCCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHEGIWQE*WVHPQS
Trigger: GCTTTGAGGGTGGACCCACCATTCCTGCCATATTCC...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp AAAATATGCCTAACATTCATAACATGCTATATATACATGGGGTACCTCAGGCACGTCTGTCCATCGCAATaGCCCGTGCTCCAAACTCTT +
Preference number: 4 (lower is better)
Translates to: KICLTFITCYIYMGYLRHVCPSQ*PVLQTL
Trigger: AAGAGTTTGGAGCACGGGCCATTGCGATGGACAGAC...GTGCCTGAGGTACCCCATGTATATATAGCATGTTATGAATGTTAGGCATATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGCTCCTAATTTGCTTCTaGCTCCCAGAAGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHELLICF*LPEGSQ
Trigger: CTGGGAGCCTTCTGGGAGCCAGAAGCAAATTAGGAG...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATCACAACCATAGCAACTaGAATTACCACCTGAGTAAA +
Preference number: 4 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDHNHSN*NYHLSK
Trigger: TTTACTCAGGTGGTAATTCCAGTTGCTATGGTTGTG...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATAAAGACCTGCTCACTTaGAAGTTTCCTCTTCTCTAT +
Preference number: 4 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDKDLLT*KFPLLY
Trigger: ATAGAGAAGAGGAAACTTCCAAGTGAGCAGGTCTTT...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp GCAAAGTGGTTGATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCCAGCAACACAAAGATaGCCTCTGCCTCATTTTTGC +
Preference number: 4 (lower is better)
Translates to: AKWLMCILRKNHSFFLPWPATQR*PLPHFC
Trigger: GCAAAAATGAGGCAGAGGCCATCTTTGTGTTGCTGG...CCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACATCAACCACTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp ATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCAGGAGACAGTTCGCTTaGACCAGGGTTTCTTTCATG +
Preference number: 4 (lower is better)
Translates to: MCILRKNHSFFLPWHWVLRRQFA*TRVSFM
Trigger: CATGAAAGAAACCCTGGTCCAAGCGAACTGTCTCCT...GAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 72 bp AGGAAAAGTACACTGATAACCCTAAAGTGCAAGTTATaGCCAAGGCAAATTGGCAGGTCAGTGGTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: RKSTLITLKCKL*PRQIGRSVVEA
Trigger: TGCTTCAACCACTGACCTGCCAATTTGCCTTGGCAATAACTTGCACTTTAGGGTTATCAGTGTACTTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 72 bp CATAGCTGTTCATCAAGTAATTGGGAAGCTATAGCTTaGGTCAGCTGTGCATGTATGTGTCACTGTGTCTCT +
Preference number: 4 (lower is better)
Translates to: HSCSSSNWEAIA*VSCACMCHCVS
Trigger: AGAGACACAGTGACACATACATGCACAGCTGACCAAAGCTATAGCTTCCCAATTACTTGATGAACAGCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGTGGATGGGGTTCTGTTaGAGTCCAGAACTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHEWMGFC*SPELQL
Trigger: TAGCTGGAGTTCTGGACTTCAACAGAACCCCATCCA...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp GGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAAGGCAAGAGCAGCCCGTaGAATGGTCTGAATATTGTT +
Preference number: 4 (lower is better)
Translates to: GIYSDSFNSKVVDVYPKEGKSSP*NGLNIV
Trigger: AACAATATTCAGACCATTTCACGGGCTGCTCTTGCC...TTCCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp TGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTCCGCACGTTGAGAGATaGAGGGATATATTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: CILRKNHSFFLPWHWVLIPHVER*RDIFEP
Trigger: TGGCTCAAATATATCCCTTCATCTCTCAACGTGCGG...AATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp ATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCGAGAGCCAGCTGACTTaGATGGAAGTATCATTCACA +
Preference number: 4 (lower is better)
Translates to: MCILRKNHSFFLPWHWVLESQLT*MEVSFT
Trigger: TGTGAATGATACTTCCATTCAAGTCAGCTGGCTCTC...GAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp GCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTACCAGGAATTTATTCTaGCAGCTTCAACAGCAAAGT +
Preference number: 4 (lower is better)
Translates to: ALALGSHCTTLYSTSATFTRNLF*QLQQQS
Trigger: ACTTTGCTGTTGAAGCTGTCAGAATAAATTCCTGGT...AAAAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAAACTCTTTCTCCACAGTaGCAAGCATTCCCCATTGCT +
Preference number: 4 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKTLSPQ*QAFPIA
Trigger: AGCAATGGGGAATGCTTGTCACTGTGGAGAAAGAGT...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAATCCTTGAGTGCCTATTaGAAGGATGGACAGATGTGC +
Preference number: 4 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKSLSAY*KDGQMC
Trigger: GCACATCTGTCCATCCTTTCAATAGGCACTCAAGGA...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGCAGGAGAGAGCCTTCTaGGGGCAGTTGTTTACAACT +
Preference number: 4 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHEQERAF*GQLFTT
Trigger: AGTTGTAAACAACTGCCCTCAGAAGGCTCTCTCCTG...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp CTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTTACAGTCAAATATGCATGCTaGGATTTTCAGGAAACCAAC +
Preference number: 4 (lower is better)
Translates to: LSAFPTQGQIRVTTSILTVKYAC*DFQETN
Trigger: GTTGGTTTCCTGAAAATCTCAGCATGCATATTTGAC...TGTAAGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp ATGTGCACACACGAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGCATATCAGCTGCCTTaGGTTAAAACCTTAATATTC +
Preference number: 4 (lower is better)
Translates to: MCTHECVLKSLIVRLDNAAYQLP*VKTLIF
Trigger: GAATATTAAGGTTTTAACTCAAGGCAGCTGATATGC...AGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTCGTGTGTGCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGCTTATCAGCCTGTGTTaGCCTCTTTGCTGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHELISLC*PLCCCP
Trigger: AGGACAGCAGCAAAGAGGGCAACACAGGCTGATAAG...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR GCA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAATTCCGAGCAGTGAGCTaGTTCAGGTTGGAGAGATTA +
Preference number: 4 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKFRAVS*FRLERL
Trigger: TAATCTCTCCAACCTGAAGCAGCTCACTGCTCGGAA...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp GGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAATTCCGAGCAGTGAGCTaGTTCAGGTTGGAGAGATTA +
Preference number: 4 (lower is better)
Translates to: GIYSDSFNSKVVDVYPKEFRAVS*FRLERL
Trigger: TAATCTCTCCAACCTGAAGCAGCTCACTGCTCGGAA...TTCCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR GCA 90 bp GGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAACCCTTTTTGTGCATATaGCAGCAAAAGACGCTGAGC +
Preference number: 4 (lower is better)
Translates to: GIYSDSFNSKVVDVYPKEPFLCI*QQKTLS
Trigger: GCTCAGCGTCTTTTGCTGGCATATGCACAAAAAGGG...TTCCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR GCA 90 bp CTGGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTGAAGGATGTAGGTTATaGCTTCTTAGCATTCATATT +
Preference number: 4 (lower is better)
Translates to: LVLSAFPTQGQIRVTTSIEGCRL*LLSIHI
Trigger: AATATGAATGCTAAGAAGGCATAACCTACATCCTTC...AATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGCTGTTGCAATGGCCTTaGTTTGTGCTCTTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHELLQWP*FVLFWW
Trigger: CCACCAGAAGAGCACAAAGCAAGGCCATTGCAACAG...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATTCTAATTATGACAGTTaGATCAACCTTACCAACAGG +
Preference number: 4 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDSNYDS*INLTNR
Trigger: CCTGTTGGTAAGGTTGATGCAACTGTCATAATTAGA...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTCTTGTGAATTACATCTaGATGAAAAATACATGGTGC +
Preference number: 4 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLLVNYI*MKNTWC
Trigger: GCACCATGTATTTTTCATGCAGATGTAATTCACAAG...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp TGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTCCAATGCCTTCTGAATaGTCATTCCTGGGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: CILRKNHSFFLPWHWVLIPMPSE*SFLGLF
Trigger: AAAGAGCCCCAGGAATGAGCATTCAGAAGGCATTGG...AATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp TTGCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTCAGTGTGGATTTAAATaGCGTAATTGGTGGTGTACT +
Preference number: 4 (lower is better)
Translates to: LPWHWVLIVQPCTVLQQLQCGFK*RNWWCT
Trigger: AGTACACCACCAATTACGGCATTTAAATCCACACTG...AAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTAGCAGACCACAGGAATaGCAGTACCCATTGATACTA +
Preference number: 4 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVSRPQE*QYPLIL
Trigger: TAGTATCAATGGGTACTGGCATTCCTGTGGTCTGCT...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp CTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTTACAAGAATAGAGACTGCCTaGTCTGGAAATTCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: LSAFPTQGQIRVTTSILTRIETA*SGNSFG
Trigger: ACCAAAAGAATTTCCAGAGCAGGCAGTCTCTATTCT...TGTAAGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATCACATTATGGAGAAATaGACTAGATGTAGTACATGC +
Preference number: 4 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDHIMEK*TRCSTC
Trigger: GCATGTACTACATCTAGTGCATTTCTCCATAATGTG...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTAGCTTTGGTCAGCTGTaGATGTATGTGTCACTGTGT +
Preference number: 4 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVSFGQL*MYVSLC
Trigger: ACACAGTGACACATACATGCACAGCTGACCAAAGCT...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp GGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTATAACAACATGCACCTaGCTAACATACAGTAACTAT +
Preference number: 4 (lower is better)
Translates to: GAFSISHTGSNQGNYLHSITTCT*LTYSNY
Trigger: ATAGTTACTGTATGTTAGGCAGGTGCATGTTGTTAT...AGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp ATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCCATTATCCCAGCCATTaGATATCAGCTGCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: MCILRKNHSFFLPWHWVLHYPSH*ISAALS
Trigger: ACTCAAGGCAGCTGATATGCAATGGCTGGGATAATG...GAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp ATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTGTATCCTCAAAACATCCCTaGAACACAAGCCAGGAATGG +
Preference number: 4 (lower is better)
Translates to: ILRKNHSFFLPWHWVLIVSSKHP*NTSQEW
Trigger: CCATTCCTGGCTTGTGTTGCAGGGATGTTTTGAGGA...TACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp GCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTAGCCTACGAACTTCTTaGTTAAGCTCAATCTGCAAT +
Preference number: 4 (lower is better)
Translates to: ALALGSHCTTLYSTSATFSLRTS*LSSICN
Trigger: ATTGCAGATTGAGCTTAACCAAGAAGTTCGTAGGCT...AAAAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp AAAATATGCCTAACATTCATAACATGCTATATATACATGGGGTACCTCAGGCACAAAAAGCCCCATGGCTaGGCCACTTTGTGGTCTGTA +
Preference number: 4 (lower is better)
Translates to: KICLTFITCYIYMGYLRHKKPHG*ATLWSV
Trigger: TACAGACCACAAAGTGGCCCAGCCATGGGGCTTTTT...GTGCCTGAGGTACCCCATGTATATATAGCATGTTATGAATGTTAGGCATATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp TGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTGTCAGCATCCGCAGTTaGTTGTTGGATATATCCAGC +
Preference number: 4 (lower is better)
Translates to: CILRKNHSFFLPWHWVLIVSIRS*LLDISS
Trigger: GCTGGATATATCCAACAACCAACTGCGGATGCTGAC...AATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp CTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTTACAAAATGGATAGAGAGCTaGATCCGTTCAGAAATAGGT +
Preference number: 4 (lower is better)
Translates to: LSAFPTQGQIRVTTSILTKWIES*IRSEIG
Trigger: ACCTATTTCTGAACGGATCCAGCTCTCTATCCATTT...TGTAAGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp GCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTAAATGGATAGAGAGCTaGATCCGTTCAGAAATAGGT +
Preference number: 4 (lower is better)
Translates to: ALALGSHCTTLYSTSATFKWIES*IRSEIG
Trigger: ACCTATTTCTGAACGGATCCAGCTCTCTATCCATTT...AAAAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp ATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTGTAATTAATGCCCCCATTTaGGGTGTAAATGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: ILRKNHSFFLPWHWVLIVINAPI*GVNGLQ
Trigger: CTGCAGCCCATTTACACCCCAAATGGGGGCATTAAT...TACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp ATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCAGTATCGCATGTTGTTaGGGATATGGCAGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: MCILRKNHSFFLPWHWVLSIACC*GYGSLC
Trigger: ACACAGACTGCCATATCCCCAACAACATGCGATACT...GAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp GGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAAAGCATCCATTCCCTGTaGACTGCAATATTGCCTCGT +
Preference number: 4 (lower is better)
Translates to: GIYSDSFNSKVVDVYPKESIHSL*TAILPR
Trigger: ACGAGGCAATATTGCAGTCCACAGGGAATGGATGCT...TTCCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp GCAAAGTGGTTGATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGAAATGCCTGTTGCAATaGCCTTGCTTTGTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: AKWLMCILRKNHSFFLPWKCLLQ*PCFVLF
Trigger: GAAGAGCACAAAGCAAGGCCATTGCAACAGGCATTT...CCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACATCAACCACTTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp CTGGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTACAAAAAGGATCAAATaGCCTTTAGAAATGCAAGTC +
Preference number: 4 (lower is better)
Translates to: LVLSAFPTQGQIRVTTSITKRIK*PLEMQV
Trigger: GACTTGCATTTCTAAAGGCCATTTGATCCTTTTTGT...AATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp AAGTGCCAATTAAGTAGGATGAATTTATGTGGGAGGGTGAACACCTGCTCAAGCTTCATGATATCTCCATaGGGCGTGTTAATGAAAGTG +
Preference number: 4 (lower is better)
Translates to: KCQLSRMNLCGRVNTCSSFMISP*GVLMKV
Trigger: CACTTTCATTAACACGCCCCATGGAGATATCATGAA...GCTTGAGCAGGTGTTCACCCTCCCACATAAATTCATCCTACTTAATTGGCACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp GCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTCTGTGGGACATCCTCTaGTATGATAAGATAATCAAG +
Preference number: 4 (lower is better)
Translates to: ALALGSHCTTLYSTSATFLWDIL*YDKIIK
Trigger: CTTGATTATCTTATCATACCAGAGGATGTCCCACAG...AAAAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp ATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTGTATATGGGCAGTTAGGGTaGCAGACAGTACATCTCATC +
Preference number: 4 (lower is better)
Translates to: ILRKNHSFFLPWHWVLIVYGQLG*QTVHLI
Trigger: GATGAGATGTACTGTCTGCCACCCTAACTGCCCATA...TACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 72 bp GTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTaGGCATTGGGTTCTCATTGTACAACCCTGTACAGT +
Preference number: 4 (lower is better)
Translates to: VYPKEKSLVLFA*ALGSHCTTLYS
Trigger: ACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
3UTR CAA 72 bp GCTCATTGCATGCAGGCTCTAGTATATGTACCCATATaGGCTAATATGGCCCAATCTGGTTATGATTTTTCC +
Preference number: 4 (lower is better)
Translates to: AHCMQALVYVPI*ANMAQSGYDFS
Trigger: GGAAAAATCATAACCAGATTGGGCCATATTAGCCAATATGGGTACATATACTAGAGCCTGCATGCAATGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 72 bp CTGCATGACCATCTGCCTGAAACATTTTATGCACCGTaGAATTTGCTGGATCATTGTAACCAAGTAGCAAAG +
Preference number: 4 (lower is better)
Translates to: LHDHLPETFYAP*NLLDHCNQVAK
Trigger: CTTTGCTACTTGGTTACAATGATCCAGCAAATTCAACGGTGCATAAAATGTTTCAGGCAGATGGTCATGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGAGGTCAAGCCAGCCTTaGTTAGCCTACGAACTTCTT +
Preference number: 4 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHERSSQP*LAYELL
Trigger: AAGAAGTTCGTAGGCTAATCAAGGCTGGCTTGACCT...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAAGCAAATGGAGAACTCTaGCATTCTTGGGAAGGTTCA +
Preference number: 4 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKANGEL*HSWEGS
Trigger: TGAACCTTCCCAAGAATGTCAGAGTTCTCCATTTGC...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp ATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTGTAGGCACACTGCTCAGGTaGTTCTTAGACAAAAACAAC +
Preference number: 4 (lower is better)
Translates to: ILRKNHSFFLPWHWVLIVGTLLR*FLDKNN
Trigger: GTTGTTTTTGTCTAAGAATCACCTGAGCAGTGTGCC...TACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp TTGCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTCGAATTACGTACAATTaGAAATTCCTTGAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: LPWHWVLIVQPCTVLQQLRITYN*KFLELG
Trigger: ACCAAGCTCAAGGAATTTTCAATTGTACGTAATTCG...AAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp ATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTGTAGAGAGCCAGCTGACTTaGATGGAAGTATCATTCACA +
Preference number: 4 (lower is better)
Translates to: ILRKNHSFFLPWHWVLIVESQLT*MEVSFT
Trigger: TGTGAATGATACTTCCATTCAAGTCAGCTGGCTCTC...TACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp CAGGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGATCTGCCCTTTCATCTaGCCACCAGGAATTTATTCT +
Preference number: 4 (lower is better)
Translates to: QEFILTASTAKWLMCILRICPFI*PPGIYS
Trigger: AGAATAAATTCCTGGTGGTCAGATGAAAGGGCAGAT...CCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp TCAGCTGACATAACAGAACCACTGATCAGTTGTTTTTGTCTAAATAGCAGGAAGGAACCCCATAAGAAATaGCAGGAACCTCTTCATCCT +
Preference number: 4 (lower is better)
Translates to: SADITEPLISCFCLNSRKEPHKK*QEPLHP
Trigger: AGGATGAAGAGGTTCCTGTCATTTCTTATGGGGTTC...CTTCCTGCTATTTAGACAAAAACAACTGATCAGTGGTTCTGTTATGTCAGCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp TTCGATTATCTTTTACTCCTGTCAAGATTTTGTCAACTTAACGAGAAGGCATGCGGATCAGATTCTATCTaGGTCACCTCATTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: FDYLLLLSRFCQLNEKACGSDSI*VTSFGQ
Trigger: CTGGCCAAATGAGGTGACTCAGATAGAATCTGATCC...GCATGCCTTCTCGTTAAGTTGACAAAATCTTGACAGGAGTAAAAGATAATCGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp GCAAAGTGGTTGATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGTATTGCCTCGTGTTCTaGATGGATGCTTCAATCACA +
Preference number: 4 (lower is better)
Translates to: AKWLMCILRKNHSFFLPWYCLVF*MDASIT
Trigger: TGTGATTGAAGCATCCATTCAGAACACGAGGCAATA...CCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACATCAACCACTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAATATACACTAGTCCTATaGGCGACACACACTTGGCAA +
Preference number: 4 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKYTLVL*ATHTWQ
Trigger: TTGCCAAGTGTGTGTCGCTCATAGGACTAGTGTATA...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp CTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTTACAGTCACACAAAGAGTTTaGATTCTATCTTGCAAGCAA +
Preference number: 4 (lower is better)
Translates to: LSAFPTQGQIRVTTSILTVTQRV*ILSCKQ
Trigger: TTGCTTGCAAGATAGAATTCAAACTCTTTGTGTGAC...TGTAAGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAAGGGAATGTCACAGGATaGAAGACCTTGAGCACATAT +
Preference number: 4 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKGNVTG*KTLSTY
Trigger: ATATGTGCTCAAGGTCTTTCATCCTGTGACATTCCC...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTTTCCTACCCCAATATTaGTCAGTCATCAGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVFLPQY*SVIRKC
Trigger: ACACTTCCTGATGACTGATCAATATTGGGGTAGGAA...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp ACGAGCTCTAACTCTAGACTTGGAGGCAGTGAGGTGATCAGAACAAGCTATTTTCTATGTATATTGTGGTaGCCAAAGTTTACTTCCCAA +
Preference number: 4 (lower is better)
Translates to: TSSNSRLGGSEVIRTSYFLCILW*PKFTSQ
Trigger: TTGGGAAGTAAACTTTGGTCACCACAATATACATAG...AAAATAGCTTGTTCTGATCACCTCACTGCCTCCAAGTCTAGAGTTAGAGCTCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp GCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTTATATACTTTTTACTTaGTGTAGGAGTTCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: ALALGSHCTTLYSTSATFYILFT*CRSSAA
Trigger: GGCAGCAGAACTCCTACATCAAGTAAAAAGTATATA...AAAAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp GGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAACTGTCCAATGACATCTaGGATTACCATGAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: GIYSDSFNSKVVDVYPKELSNDI*DYHELW
Trigger: CCAAAGCTCATGGTAATCTCAGATGTCATTGGACAG...TTCCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp TTGCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTCTTTAGTACAAGATaGCTCCTAGAAGGATGTGAA +
Preference number: 4 (lower is better)
Translates to: LPWHWVLIVQPCTVLQQLFFSTR*LLEGCE
Trigger: TTCACATCCTTCTAGGAGTCATCTTGTACTAAAGAA...AAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp TCAGCTGACATAACAGAACCACTGATCAGTTGTTTTTGTCTAAATAGCAGGAAGTCACAGAATGAACTATaGCATTCCCCAAGCCGAACA +
Preference number: 4 (lower is better)
Translates to: SADITEPLISCFCLNSRKSQNEL*HSPSRT
Trigger: TGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTGA...CTTCCTGCTATTTAGACAAAAACAACTGATCAGTGGTTCTGTTATGTCAGCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp ATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTGTAGTCCTTCTTGGTGCCTaGCTCGCAATAATCATCTTT +
Preference number: 4 (lower is better)
Translates to: ILRKNHSFFLPWHWVLIVVLLGA*LAIIIF
Trigger: AAAGATGATTATTGCGAGGCAGGCACCAAGAAGGAC...TACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR GCA 90 bp GGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAAGTCCTTCTTGGTGCCTaGCTCGCAATAATCATCTTT +
Preference number: 4 (lower is better)
Translates to: GIYSDSFNSKVVDVYPKEVLLGA*LAIIIF
Trigger: AAAGATGATTATTGCGAGGCAGGCACCAAGAAGGAC...TTCCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR GCA 90 bp TCAGCTGACATAACAGAACCACTGATCAGTTGTTTTTGTCTAAATAGCAGGAAGAGTTGTCCTTCTTGGTaGCTGCCTCGCAATAATCAT +
Preference number: 4 (lower is better)
Translates to: SADITEPLISCFCLNSRKSCPSW*LPRNNH
Trigger: ATGATTATTGCGAGGCAGGCACCAAGAAGGACAACT...CTTCCTGCTATTTAGACAAAAACAACTGATCAGTGGTTCTGTTATGTCAGCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGCAGAAAGCCAACCCCTaGATTTTCGGGTCCTTTCAA +
Preference number: 4 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHEQKANP*IFGSFQ
Trigger: TTGAAAGGACCCGAAAATGCAGGGGTTGGCTTTCTG...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp TTCGATTATCTTTTACTCCTGTCAAGATTTTGTCAACTTAACGAGAAGGCATGCTACATTCCTCGTATCTaGCTGCGATTGTCCCATGCA +
Preference number: 4 (lower is better)
Translates to: FDYLLLLSRFCQLNEKACYIPRI*LRLSHA
Trigger: TGCATGGGACAATCGCAGGCAGATACGAGGAATGTA...GCATGCCTTCTCGTTAAGTTGACAAAATCTTGACAGGAGTAAAAGATAATCGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp GCAAAGTGGTTGATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGATGTTTTGCAAGCACTaGAGTATCGTACTCAGGCAT +
Preference number: 4 (lower is better)
Translates to: AKWLMCILRKNHSFFLPWMFCKH*SIVLRH
Trigger: ATGCCTGAGTACGATACTGCAGTGCTTGCAAAACAT...CCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACATCAACCACTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp GCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTCCCATTGATACTACTTaGCAAATAACTGTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: ALALGSHCTTLYSTSATFPIDTT*QITVLK
Trigger: TTTCAGGACAGTTATTTGGCAAGTAGTATCAATGGG...AAAAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp AAGTGCCAATTAAGTAGGATGAATTTATGTGGGAGGGTGAACACCTGCTCAAGCAATGGTTATGCAGGTTaGTTCCCTAACATATCAAGT +
Preference number: 4 (lower is better)
Translates to: KCQLSRMNLCGRVNTCSSNGYAG*FPNISS
Trigger: ACTTGATATGTTAGGGAAGCAACCTGCATAACCATT...GCTTGAGCAGGTGTTCACCCTCCCACATAAATTCATCCTACTTAATTGGCACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTTTCCTTTGCTTTATCTaGAGAAGGAACCACCACAAG +
Preference number: 4 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVFLCFI*RRNHHK
Trigger: CTTGTGGTGGTTCCTTCTGCAGATAAAGCAAAGGAA...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp GCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTCAAAGTTTTACAAACTaGATGACCATCTGCCTGAAA +
Preference number: 4 (lower is better)
Translates to: ALALGSHCTTLYSTSATFQSFTN*MTICLK
Trigger: TTTCAGGCAGATGGTCATGCAGTTTGTAAAACTTTG...AAAAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp CTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTTACAGTAGCCAAAATATTTTaGATGGGTGCTATGATGCAA +
Preference number: 4 (lower is better)
Translates to: LSAFPTQGQIRVTTSILTVAKIF*MGAMMQ
Trigger: TTGCATCATAGCACCCATGCAAAATATTTTGGCTAC...TGTAAGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp TGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTCTTCTGCAATCAGACTaGAGAATACTGATGCTCTCC +
Preference number: 4 (lower is better)
Translates to: CILRKNHSFFLPWHWVLILLQSD*RILMLS
Trigger: GGAGAGCATCAGTATTCTGCAGTCTGATTGCAGAAG...AATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp GCAAAGTGGTTGATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGAGAATTTTTCCACACTaGCAACAGGTGATGGCAAGT +
Preference number: 4 (lower is better)
Translates to: AKWLMCILRKNHSFFLPWRIFPH*QQVMAS
Trigger: ACTTGCCATCACCTGTTGCCAGTGTGGAAAAATTCT...CCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACATCAACCACTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGTCTTGGGAAGGTTCATaGGGAATTCGTCCAGTTGGT +
Preference number: 4 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHESWEGS*GIRPVG
Trigger: ACCAACTGGACGAATTCCCCATGAACCTTCCCAAGA...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp ATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCGAGCAGCCCGTGAAATaGTCTGAATATTGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: MCILRKNHSFFLPWHWVLEQPVK*SEYCFP
Trigger: AGGAAAACAATATTCAGACCATTTCACGGGCTGCTC...GAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGTCCGCAGTTGGTTGTTaGATATATCCAGCCGTTCCA +
Preference number: 4 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHESAVGC*IYPAVP
Trigger: TGGAACGGCTGGATATATCCAACAACCAACTGCGGA...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp ATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCTTTTTGCCTTGGCATTaGGTTCTCATTGTACAACCC +
Preference number: 4 (lower is better)
Translates to: MCILRKNHSFFLPWHWVLFLPWH*VLIVQP
Trigger: GGGTTGTACAATGAGAACCCAATGCCAAGGCAAAAA...GAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp ATGTGCACACACGAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTACATTGATCACCTGTTaGTCTAAATATCATGTTGAC +
Preference number: 4 (lower is better)
Translates to: MCTHECVLKSLIVRLDNATLITC*SKYHVD
Trigger: GTCAACATGATATTTAGACCAACAGGTGATCAATGT...AGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTCGTGTGTGCACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp CAGGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAAACAGAATAGAGATTaGCAGCAGACCACAGGAATG +
Preference number: 4 (lower is better)
Translates to: QEFILTASTAKWLMCILRKQNRD*QQTTGM
Trigger: CATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTT...CCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATGGAAAAGTTCAGTACTaGTTGATCAAAATAGGTTTG +
Preference number: 4 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDGKVQY*LIKIGL
Trigger: CAAACCTATTTTGATCAACCAGTACTGAACTTTTCC...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp GGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAACCACTCTGCTGCAACTaGACTAAATGTTGTCGTTTG +
Preference number: 4 (lower is better)
Translates to: GIYSDSFNSKVVDVYPKEPLCCN*TKCCRL
Trigger: CAAACGACAACATTTAGTCCAGTTGCAGCAGAGTGG...TTCCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp TCAGCTGACATAACAGAACCACTGATCAGTTGTTTTTGTCTAAATAGCAGGAAGGGAGAGTATCAAAATTaGAGCACTCCCTGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: SADITEPLISCFCLNSRKGEYQN*STPCSQ
Trigger: TTGGCTACAGGGAGTGCTCCAATTTTGATACTCTCC...CTTCCTGCTATTTAGACAAAAACAACTGATCAGTGGTTCTGTTATGTCAGCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp ACGAGCTCTAACTCTAGACTTGGAGGCAGTGAGGTGATCAGAACAAGCTATTTTTTTTGCAATAGGAAATaGCAAGCATGTGAAAGTGGA +
Preference number: 4 (lower is better)
Translates to: TSSNSRLGGSEVIRTSYFFCNRK*QACESG
Trigger: TCCACTTTCACATGCTTGCCATTTCCTATTGCAAAA...AAAATAGCTTGTTCTGATCACCTCACTGCCTCCAAGTCTAGAGTTAGAGCTCGT
41% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp CTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTTACATCAGCAGAGCAAGTTTaGCATAGACATAAACATCAA +
Preference number: 4 (lower is better)
Translates to: LSAFPTQGQIRVTTSILTSAEQV*HRHKHQ
Trigger: TTGATGTTTATGTCTATGCCAAACTTGCTCTGCTGA...TGTAAGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGAGAGAGAGAGCCAGCTaGCTTGAATGGAAGTATCAT +
Preference number: 4 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHERERAS*LEWKYH
Trigger: ATGATACTTCCATTCAAGTCAGCTGGCTCTCTCTCT...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp CAGGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGTTTAAGGAGACGATCTaGAAACTGGTTTCTGTCATC +
Preference number: 4 (lower is better)
Translates to: QEFILTASTAKWLMCILRFKETI*KLVSVI
Trigger: GATGACAGAAACCAGTTTTCAGATCGTCTCCTTAAA...CCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp ATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCACCAGGAATTTATTCTaGCAGCTTCAACAGCAAAGT +
Preference number: 4 (lower is better)
Translates to: MCILRKNHSFFLPWHWVLTRNLF*QLQQQS
Trigger: ACTTTGCTGTTGAAGCTGTCAGAATAAATTCCTGGT...GAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp TCAGCTGACATAACAGAACCACTGATCAGTTGTTTTTGTCTAAATAGCAGGAAGATCTGCCCTTTCATCTaGCCACCAGGAATTTATTCT +
Preference number: 4 (lower is better)
Translates to: SADITEPLISCFCLNSRKICPFI*PPGIYS
Trigger: AGAATAAATTCCTGGTGGTCAGATGAAAGGGCAGAT...CTTCCTGCTATTTAGACAAAAACAACTGATCAGTGGTTCTGTTATGTCAGCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp TCAGCTGACATAACAGAACCACTGATCAGTTGTTTTTGTCTAAATAGCAGGAAGTCATCTCAATTTTCTTaGTTCTGTCAGGCCGGGTTA +
Preference number: 4 (lower is better)
Translates to: SADITEPLISCFCLNSRKSSQFS*FCQAGL
Trigger: TAACCCGGCCTGACAGAATCAAGAAAATTGAGATGA...CTTCCTGCTATTTAGACAAAAACAACTGATCAGTGGTTCTGTTATGTCAGCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp AAAATATGCCTAACATTCATAACATGCTATATATACATGGGGTACCTCAGGCACGCATACTGTGGTCTTTaGGCAAGGCTAATTTTGCAC +
Preference number: 4 (lower is better)
Translates to: KICLTFITCYIYMGYLRHAYCGL*ARLILH
Trigger: GTGCAAAATTAGCCTTGCTCAAAGACCACAGTATGC...GTGCCTGAGGTACCCCATGTATATATAGCATGTTATGAATGTTAGGCATATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAAAAGACAAGTGATAGATaGGCCTACCCAAGGAATATG +
Preference number: 4 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKKTSDR*AYPRNM
Trigger: CATATTCCTTGGGTAGGCTCATCTATCACTTGTCTT...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp TCAGCTGACATAACAGAACCACTGATCAGTTGTTTTTGTCTAAATAGCAGGAAGTGCCATCCGGTTAACTaGATTTGTCAAGGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: SADITEPLISCFCLNSRKCHPVN*ICQGKG
Trigger: TCCTTTTCCTTGACAAATTCAGTTAACCGGATGGCA...CTTCCTGCTATTTAGACAAAAACAACTGATCAGTGGTTCTGTTATGTCAGCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTGCTCTTCATTCCAGGTaGTCTCAGGTAATAATTTCA +
Preference number: 4 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVALHSR*SQVIIS
Trigger: TGAAATTATTACCTGAGATCACCTGGAATGAAGAGC...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGAGTGTGACTCACCATTaGGTCCAGATTTCAGTCAAC +
Preference number: 4 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHESVTHH*VQISVN
Trigger: GTTGACTGAAATCTGGACTCAATGGTGAGTCACACT...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAACATCTGAGATTACCATaGGCTTTGGTATTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKHLRLP*ALVFPH
Trigger: GTGAGGAAATACCAAAGCTCATGGTAATCTCAGATG...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp CAGGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGGATCACAGTTGTTTATaGCACTGTTTATCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: QEFILTASTAKWLMCILRDHSCL*HCLSSS
Trigger: GGAAGAGGATAAACAGTGTCATAAACAACTGTGATC...CCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp CAGGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAGGAACTCTCATACCTaGCACCAGATGACATTAAAA +
Preference number: 4 (lower is better)
Translates to: QEFILTASTAKWLMCILRRNSHT*HQMTLK
Trigger: TTTTAATGTCATCTGGTGTCAGGTATGAGAGTTCCT...CCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp CTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTTACATTATCAAATGTAATCTaGGTGTCTTTATGTGCACAC +
Preference number: 4 (lower is better)
Translates to: LSAFPTQGQIRVTTSILTLSNVI*VSLCAH
Trigger: GTGTGCACATAAAGACACGCAGATTACATTTGATAA...TGTAAGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR GCA 90 bp AAAATATGCCTAACATTCATAACATGCTATATATACATGGGGTACCTCAGGCACGTAATGGATATCTTGTaGAGCCAAGACTGGCATCCA +
Preference number: 4 (lower is better)
Translates to: KICLTFITCYIYMGYLRHVMDIL*SQDWHP
Trigger: TGGATGCCAGTCTTGGCTGCACAAGATATCCATTAC...GTGCCTGAGGTACCCCATGTATATATAGCATGTTATGAATGTTAGGCATATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp CAGGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAATCTTAGCAGTCTTTaGCATGTTGTACACAAGGTG +
Preference number: 4 (lower is better)
Translates to: QEFILTASTAKWLMCILRNLSSL*HVVHKV
Trigger: CACCTTGTGTACAACATGGCAAAGACTGCTAAGATT...CCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp TTCGATTATCTTTTACTCCTGTCAAGATTTTGTCAACTTAACGAGAAGGCATGCTGCTTTGCTTTCCCATaGAGCTGGAATGGTAAGTCA +
Preference number: 4 (lower is better)
Translates to: FDYLLLLSRFCQLNEKACCFAFP*SWNGKS
Trigger: TGACTTACCATTCCAGCTGCATGGGAAAGCAAAGCA...GCATGCCTTCTCGTTAAGTTGACAAAATCTTGACAGGAGTAAAAGATAATCGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp TCAGCTGACATAACAGAACCACTGATCAGTTGTTTTTGTCTAAATAGCAGGAAGGTCATTAACAAAGTGTaGGACATGGTAGGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: SADITEPLISCFCLNSRKVINKV*DMVGLR
Trigger: TCTGAGACCTACCATGTCGCACACTTTGTTAATGAC...CTTCCTGCTATTTAGACAAAAACAACTGATCAGTGGTTCTGTTATGTCAGCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp GCAAAGTGGTTGATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCTGATAACCCTAAAGTaGAAGTTATTGCCAAGGCAA +
Preference number: 4 (lower is better)
Translates to: AKWLMCILRKNHSFFLPWLITLK*KLLPRQ
Trigger: TTGCCTTGGCAATAACTTGCACTTTAGGGTTATCAG...CCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACATCAACCACTTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp AAGTGCCAATTAAGTAGGATGAATTTATGTGGGAGGGTGAACACCTGCTCAAGCTATTTTGATTTCCAATaGCTTCTGAATGCTCATTCC +
Preference number: 4 (lower is better)
Translates to: KCQLSRMNLCGRVNTCSSYFDFQ*LLNAHS
Trigger: GGAATGAGCATTCAGAAGGCATTGGAAATCAAAATA...GCTTGAGCAGGTGTTCACCCTCCCACATAAATTCATCCTACTTAATTGGCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp AAGTGCCAATTAAGTAGGATGAATTTATGTGGGAGGGTGAACACCTGCTCAAGCGTAGACTATTGCACCTaGATTGTAGAGACATTAAAA +
Preference number: 4 (lower is better)
Translates to: KCQLSRMNLCGRVNTCSSVDYCT*IVETLK
Trigger: TTTTAATGTCTCTACAATGCAGGTGCAATAGTCTAC...GCTTGAGCAGGTGTTCACCCTCCCACATAAATTCATCCTACTTAATTGGCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp GCAAAGTGGTTGATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGATCTCTTTGCAGAGATaGTCGACTCTAATAGCAAAG +
Preference number: 4 (lower is better)
Translates to: AKWLMCILRKNHSFFLPWISLQR*STLIAK
Trigger: CTTTGCTATTAGAGTCGAGCATCTCTGCAAAGAGAT...CCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACATCAACCACTTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp TGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTAAACTCCCAGAAATTTaGAAAAGGTGGCATGTCCCT +
Preference number: 4 (lower is better)
Translates to: CILRKNHSFFLPWHWVLIKLPEI*KRWHVP
Trigger: AGGGACATGCCACCTTTTGCAAATTTCTGGGAGTTT...AATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp GCAAAGTGGTTGATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGAACTGCATGACCATCTaGCTGAAACATTTTATGCAC +
Preference number: 4 (lower is better)
Translates to: AKWLMCILRKNHSFFLPWNCMTI*LKHFMH
Trigger: GTGCATAAAATGTTTCAGGCAGATGGTCATGCAGTT...CCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACATCAACCACTTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp CTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTTACAGGAAAGACCAAAATATaGCTAACATTCATAACATGC +
Preference number: 4 (lower is better)
Translates to: LSAFPTQGQIRVTTSILTGKTKI*LTFITC
Trigger: GCATGTTATGAATGTTAGGCATATTTTGGTCTTTCC...TGTAAGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp GGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAACTGCCTGTATGTGGTTaGGATAGTTGTCCATTTAAC +
Preference number: 4 (lower is better)
Translates to: GIYSDSFNSKVVDVYPKELPVCG*DSCPFN
Trigger: GTTAAATGGACAACTATCGCAACCACATACAGGCAG...TTCCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp ATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATGTCTGGAACCATTTaGTGCCTTCTTTCTTTTAGG +
Preference number: 4 (lower is better)
Translates to: MCILRKNHSFFLPWHWVLMSGTI*CLLSFR
Trigger: CCTAAAAGAAAGAAGGCAGCAAATGGTTCCAGACAT...GAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp GGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAAAGAATTTTTCCACACTaGCAACAGGTGATGGCAAGT +
Preference number: 4 (lower is better)
Translates to: GIYSDSFNSKVVDVYPKERIFPH*QQVMAS
Trigger: ACTTGCCATCACCTGTTGCCAGTGTGGAAAAATTCT...TTCCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp CAGGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGTCGTTCTTTTTGCCTTaGCATTGGGTTCTCATTGTA +
Preference number: 4 (lower is better)
Translates to: QEFILTASTAKWLMCILRSFFLP*HWVLIV
Trigger: TACAATGAGAACCCAATGCCAAGGCAAAAAGAACGA...CCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CCA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGGCTACAACATCAGACTaGTCCCTGAAGATGACTGAA +
Preference number: 4 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHEATTSD*SLKMTE
Trigger: TTCAGTCATCTTCAGGGACCAGTCTGATGTTGTAGC...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp CAGGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAAAAAGACAGAACCATaGGAAAGCACTCTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: QEFILTASTAKWLMCILRKKTEP*ESTLSS
Trigger: TGAAGACAGAGTGCTTTCCCATGGTTCTGTCTTTTT...CCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp GGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAATCAGGAAGTGTTGCCTaGAGAAAAAGACAGAACCAT +
Preference number: 4 (lower is better)
Translates to: GIYSDSFNSKVVDVYPKESGSVA*RKRQNH
Trigger: ATGGTTCTGTCTTTTTCTCCAGGCAACACTTCCTGA...TTCCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp TTGCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTATAAAGTATTCAGGTTaGCCATTTCCAGATTTCCTT +
Preference number: 4 (lower is better)
Translates to: LPWHWVLIVQPCTVLQQLIKYSG*PFPDFL
Trigger: AAGGAAATCTGGAAATGGCCAACCTGAATACTTTAT...AAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp GCAAAGTGGTTGATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGTTGCCACCCACATTATaGAGAAATGCACTAGATGTA +
Preference number: 4 (lower is better)
Translates to: AKWLMCILRKNHSFFLPWLPPTL*RNALDV
Trigger: TACATCTAGTGCATTTCTCCATAATGTGGGTGGCAA...CCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACATCAACCACTTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp ATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTGTATCTGAGAAGCAGGTATaGGTTGAAGAAAAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: ILRKNHSFFLPWHWVLIVSEKQV*VEEKVP
Trigger: TGGCACTTTTTCTTCAACCCATACCTGCTTCTCAGA...TACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp CAGGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGTTCAGCATCTTAATTTaGTCTGTGAGCTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: QEFILTASTAKWLMCILRFSILI*SVSFSV
Trigger: GACAGAGAAGCTCACAGACCAAATTAAGATGCTGAA...CCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 72 bp TTGATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTaGCCTTGGCATTGGGTTCTCATTGTACAACCCTGT +
Preference number: 4 (lower is better)
Translates to: LMCILRKNHSFF*PWHWVLIVQPC
Trigger: ACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACATCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
3UTR CAA 72 bp AAGAGATTTCTTCAGGGACATAGTGAGGGAGAAGATTaGCCTGATTTGGCTAAGAACGCATTTCACTATTCT +
Preference number: 4 (lower is better)
Translates to: KRFLQGHSEGED*PDLAKNAFHYS
Trigger: AGAATAGTGAAATGCGTTCTTAGCCAAATCAGGCAAATCTTCTCCCTCACTATGTCCCTGAAGAAATCTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 72 bp TTCTCCAAGTTACATCTGTTCCCTAGCAAAGCTATTTaGTGGGCAGGGTTACAACTTTGCTCAAAACATTTC +
Preference number: 4 (lower is better)
Translates to: FSKLHLFPSKAI*WAGLQLCSKHF
Trigger: GAAATGTTTTGAGCAAAGTTGTAACCCTGCCCACAAAATAGCTTTGCTAGGGAACAGATGTAACTTGGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGAGGCCATGTCGGATATaGCAGCAATTCGATTTTCAT +
Preference number: 4 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHERPCRI*QQFDFH
Trigger: ATGAAAATCGAATTGCTGTCATATCCGACATGGCCT...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp AAAATATGCCTAACATTCATAACATGCTATATATACATGGGGTACCTCAGGCACGGGAAGCATGAAGAGTaGTTTTTAAGTTCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: KICLTFITCYIYMGYLRHGKHEE*FLSSQS
Trigger: TGACTGGGAACTTAAAAATCACTCTTCATGCTTCCC...GTGCCTGAGGTACCCCATGTATATATAGCATGTTATGAATGTTAGGCATATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGCTTAAGCATTGCACATaGCTGTCTCCATTGTACCAT +
Preference number: 4 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHELKHCT*LSPLYH
Trigger: ATGGTACAATGGAGACAGTCATGTGCAATGCTTAAG...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp TCAGCTGACATAACAGAACCACTGATCAGTTGTTTTTGTCTAAATAGCAGGAAGACATTTACCAAGCTCTaGATGGGATCAGATTCTATC +
Preference number: 4 (lower is better)
Translates to: SADITEPLISCFCLNSRKTFTKL*MGSDSI
Trigger: GATAGAATCTGATCCCATTCAGAGCTTGGTAAATGT...CTTCCTGCTATTTAGACAAAAACAACTGATCAGTGGTTCTGTTATGTCAGCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp GCAAAGTGGTTGATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGTTGACTGTATCCCAATaGACTTACTCAGATAAACAC +
Preference number: 4 (lower is better)
Translates to: AKWLMCILRKNHSFFLPWLTVSQ*TYSDKH
Trigger: GTGTTTATCTGAGTAAGTTCATTGGGATACAGTCAA...CCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACATCAACCACTTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp TCAGCTGACATAACAGAACCACTGATCAGTTGTTTTTGTCTAAATAGCAGGAAGGGTACAGACATATCTTaGTTCCATCTGAAACCTTCA +
Preference number: 4 (lower is better)
Translates to: SADITEPLISCFCLNSRKGTDIS*FHLKPS
Trigger: TGAAGGTTTCAGATGGAATCAAGATATGTCTGTACC...CTTCCTGCTATTTAGACAAAAACAACTGATCAGTGGTTCTGTTATGTCAGCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp TGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTCCCAGGAAGATAAACTaGAAGCATTTTGTTTGCTCA +
Preference number: 4 (lower is better)
Translates to: CILRKNHSFFLPWHWVLIPRKIN*KHFVCS
Trigger: TGAGCAAACAAAATGCTTTCAGTTTATCTTCCTGGG...AATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp TCAGCTGACATAACAGAACCACTGATCAGTTGTTTTTGTCTAAATAGCAGGAAGGCTCTTAACACTGGATaGGGTACAACAATTTACAGA +
Preference number: 4 (lower is better)
Translates to: SADITEPLISCFCLNSRKALNTG*GTTIYR
Trigger: TCTGTAAATTGTTGTACCTCATCCAGTGTTAAGAGC...CTTCCTGCTATTTAGACAAAAACAACTGATCAGTGGTTCTGTTATGTCAGCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp ATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTGTAGCAAAGAATTCATTTTaGCTAGCCGACTGTCGAAAT +
Preference number: 4 (lower is better)
Translates to: ILRKNHSFFLPWHWVLIVAKNSF*LADCRN
Trigger: ATTTCGACAGTCGGCTAGTCAAAATGAATTCTTTGC...TACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp ATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTGTAACAGACCGTAGTGAGTaGATTGCTTTGAGACTATTA +
Preference number: 4 (lower is better)
Translates to: ILRKNHSFFLPWHWVLIVTDRSE*IALRLL
Trigger: TAATAGTCTCAAAGCAATTCACTCACTACGGTCTGT...TACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp GGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAATGGTTACTGTTGAGGTaGGTGTTGTTATTAACCCAT +
Preference number: 4 (lower is better)
Translates to: GIYSDSFNSKVVDVYPKEWLLLR*VLLLTH
Trigger: ATGGGTTAATAACAACACTCACCTCAACAGTAACCA...TTCCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp TTCGATTATCTTTTACTCCTGTCAAGATTTTGTCAACTTAACGAGAAGGCATGCACTGAACCTGACCAGTaGGAACTTAGCAAATGTATG +
Preference number: 4 (lower is better)
Translates to: FDYLLLLSRFCQLNEKACTEPDQ*ELSKCM
Trigger: CATACATTTGCTAAGTTCTCACTGGTCAGGTTCAGT...GCATGCCTTCTCGTTAAGTTGACAAAATCTTGACAGGAGTAAAAGATAATCGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp AAAATATGCCTAACATTCATAACATGCTATATATACATGGGGTACCTCAGGCACACCTCTGACTTGCCTTaGGCCAGTTATTTAAAACTC +
Preference number: 4 (lower is better)
Translates to: KICLTFITCYIYMGYLRHTSDLP*ASYLKL
Trigger: GAGTTTTAAATAACTGGCTCAAGGCAAGTCAGAGGT...GTGCCTGAGGTACCCCATGTATATATAGCATGTTATGAATGTTAGGCATATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAAACATCTTATTCTGAATaGCAGTGTCCTCAACTTCCA +
Preference number: 4 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKTSYSE*QCPQLP
Trigger: TGGAAGTTGAGGACACTGTCATTCAGAATAAGATGT...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp ATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCTCATACATCTTATTCTaGATGACAGTGTCCTCAACT +
Preference number: 4 (lower is better)
Translates to: MCILRKNHSFFLPWHWVLSYILF*MTVSST
Trigger: AGTTGAGGACACTGTCATTCAGAATAAGATGTATGA...GAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp GGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAAGACATTGACTTGAGGTaGGCAATAGCATTTAGGAAT +
Preference number: 4 (lower is better)
Translates to: GIYSDSFNSKVVDVYPKEDIDLR*AIAFRN
Trigger: ATTCCTAAATGCTATTGCTCACCTCAAGTCAATGTC...TTCCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp ATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTGTAGAAATTTGCTGTCATTaGAGGAGCATGGAAAATCAC +
Preference number: 4 (lower is better)
Translates to: ILRKNHSFFLPWHWVLIVEICCH*RSMENH
Trigger: GTGATTTTCCATGCTCCTGCAATGACAGCAAATTTC...TACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGATTTTAAAGGCTGGTTaGTTCAGGCAACTTGTGGTG +
Preference number: 4 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHEILKAG*FRQLVV
Trigger: CACCACAAGTTGCCTGAAGCAACCAGCCTTTAAAAT...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp GGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAAAGCCAGAAATCCCACTaGGGGTTAAACATACAATAT +
Preference number: 4 (lower is better)
Translates to: GIYSDSFNSKVVDVYPKESQKSH*GLNIQY
Trigger: ATATTGTATGTTTAACCCCCAGTGGGATTTCTGGCT...TTCCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp GGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAATTACCAAGCTCTGAATaGGATCAGATTCTATCTGAG +
Preference number: 4 (lower is better)
Translates to: GIYSDSFNSKVVDVYPKELPSSE*DQILSE
Trigger: CTCAGATAGAATCTGATCCCATTCAGAGCTTGGTAA...TTCCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp TCAGCTGACATAACAGAACCACTGATCAGTTGTTTTTGTCTAAATAGCAGGAAGTTTCAGCTCACCCTATaGGTACAGACATATCTTGAT +
Preference number: 4 (lower is better)
Translates to: SADITEPLISCFCLNSRKFQLTL*VQTYLD
Trigger: ATCAAGATATGTCTGTACCCATAGGGTGAGCTGAAA...CTTCCTGCTATTTAGACAAAAACAACTGATCAGTGGTTCTGTTATGTCAGCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp ATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTGTTGTGTCCTCTTaGAAGAGAAACATTCTTCCA +
Preference number: 4 (lower is better)
Translates to: MCILRKNHSFFLPWHWVLIVVSS*KRNILP
Trigger: TGGAAGAATGTTTCTCTTCCAAGAGGACACAACAAT...GAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGAGCAAAGCTATTTTGTaGGCAGGGTTACAACTTTGC +
Preference number: 4 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHESKAIL*AGLQLC
Trigger: GCAAAGTTGTAACCCTGCCCACAAAATAGCTTTGCT...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 72 bp TGTTTGTTTGTTCTTGTAAAACGCATACTGTGGTCTTaGAGCAAGGCTAATTTTGCACAAGTCAGAACTCCA +
Preference number: 4 (lower is better)
Translates to: CLFVLVKRILWS*SKANFAQVRTP
Trigger: TGGAGTTCTGACTTGTGCAAAATTAGCCTTGCTCAAAGACCACAGTATGCGTTTTACAAGAACAAACAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 72 bp AGGTTGTGGATCAGTTGCACATTAGTGACATCCATCTaGAGCAGATATGCACTTTGTCTAAGAAAAAGAAAC +
Preference number: 4 (lower is better)
Translates to: RLWISCTLVTSI*SRYALCLRKRN
Trigger: GTTTCTTTTTCTTAGACAAAGTGCATATCTGCTCAAGATGGATGTCACTAATGTGCAACTGATCCACAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 72 bp ATTGTTGTGTCCTCTTGGAAGAGAAACATTCTTCCATaGACTAGTAAGACTTCTAAGCCATCATATCCCAAC +
Preference number: 4 (lower is better)
Translates to: IVVSSWKRNILP*TSKTSKPSYPN
Trigger: GTTGGGATATGATGGCTTAGAAGTCTTACTAGTCAATGGAAGAATGTTTCTCTTCCAAGAGGACACAACAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp TGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTCGAATTACGTACAATTaGAAATTCCTTGAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: CILRKNHSFFLPWHWVLIRITYN*KFLELG
Trigger: ACCAAGCTCAAGGAATTTTCAATTGTACGTAATTCG...AATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR TCA 90 bp TTCGATTATCTTTTACTCCTGTCAAGATTTTGTCAACTTAACGAGAAGGCATGCTTTAAGGAGACGATCTaGAAACTGGTTTCTGTCATC +
Preference number: 4 (lower is better)
Translates to: FDYLLLLSRFCQLNEKACFKETI*KLVSVI
Trigger: GATGACAGAAACCAGTTTTCAGATCGTCTCCTTAAA...GCATGCCTTCTCGTTAAGTTGACAAAATCTTGACAGGAGTAAAAGATAATCGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp GGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAAATTTTCTGCTTATTCTaGGGGACAAGGGAGATTAAA +
Preference number: 4 (lower is better)
Translates to: GIYSDSFNSKVVDVYPKEIFCLF*GTREIK
Trigger: TTTAATCTCCCTTGTCCCTCAGAATAAGCAGAAAAT...TTCCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAAGGTGCTAGTAGAAAATaGAGCTGTAATATTAGCTAC +
Preference number: 4 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKGASRK*SCNISY
Trigger: GTAGCTAATATTACAGCTTCATTTTCTACTAGCACC...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp TCAGCTGACATAACAGAACCACTGATCAGTTGTTTTTGTCTAAATAGCAGGAAGCAGGTTAACTTTCAGTaGATATACACTAGTCCTATG +
Preference number: 4 (lower is better)
Translates to: SADITEPLISCFCLNSRKQVNFQ*IYTSPM
Trigger: CATAGGACTAGTGTATATTCACTGAAAGTTAACCTG...CTTCCTGCTATTTAGACAAAAACAACTGATCAGTGGTTCTGTTATGTCAGCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp TGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTAACACAGCTGGTAAGTaGATGAGTCAATATTTGAAC +
Preference number: 4 (lower is better)
Translates to: CILRKNHSFFLPWHWVLINTAGK*MSQYLN
Trigger: GTTCAAATATTGACTCATTCACTTACCAGCTGTGTT...AATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp TGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTTGCCTAAAACCAGTATaGTCAAAACAACATTCTGGT +
Preference number: 4 (lower is better)
Translates to: CILRKNHSFFLPWHWVLICLKPV*SKQHSG
Trigger: ACCAGAATGTTGTTTTGATCATACTGGTTTTAGGCA...AATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp TTCGATTATCTTTTACTCCTGTCAAGATTTTGTCAACTTAACGAGAAGGCATGCTGCTCTGTGTATGTGTaGATACCTAAAAGGTATTCG +
Preference number: 4 (lower is better)
Translates to: FDYLLLLSRFCQLNEKACCSVYV*IPKRYS
Trigger: CGAATACCTTTTAGGTATGCACACATACACAGAGCA...GCATGCCTTCTCGTTAAGTTGACAAAATCTTGACAGGAGTAAAAGATAATCGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp GGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAAATACATTTCCTTGAGTaGCTATTGAAAGGATGGACA +
Preference number: 4 (lower is better)
Translates to: GIYSDSFNSKVVDVYPKEIHFLE*LLKGWT
Trigger: TGTCCATCCTTTCAATAGGCACTCAAGGAAATGTAT...TTCCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp GCAAAGTGGTTGATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGTATATGGGAGATGATTaGAAGACAAGAATTTGCAAG +
Preference number: 4 (lower is better)
Translates to: AKWLMCILRKNHSFFLPWYMGDD*KTRICK
Trigger: CTTGCAAATTCTTGTCTTCCAATCATCTCCCATATA...CCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACATCAACCACTTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAAGATATGATCACCCATTaGTATGTGTGTGCTAAAATG +
Preference number: 4 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKDMITH*YVCAKM
Trigger: CATTTTAGCACACACATACCAATGGGTGATCATATC...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGGTAAAACGCATACTGTaGTCTTTGAGCAAGGCTAAT +
Preference number: 4 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHEVKRIL*SLSKAN
Trigger: ATTAGCCTTGCTCAAAGACCACAGTATGCGTTTTAC...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp TTCGATTATCTTTTACTCCTGTCAAGATTTTGTCAACTTAACGAGAAGGCATGCTGCTTTTCTGCAAGCTaGTTCAGTTTTGAGTTTGTC +
Preference number: 4 (lower is better)
Translates to: FDYLLLLSRFCQLNEKACCFSAS*FSFEFV
Trigger: GACAAACTCAAAACTGAACCAGCTTGCAGAAAAGCA...GCATGCCTTCTCGTTAAGTTGACAAAATCTTGACAGGAGTAAAAGATAATCGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp TTCGATTATCTTTTACTCCTGTCAAGATTTTGTCAACTTAACGAGAAGGCATGCTCTACTTGTGCTTTGTaGACTTTTCATGATGGCGAT +
Preference number: 4 (lower is better)
Translates to: FDYLLLLSRFCQLNEKACSTCAL*TFHDGD
Trigger: ATCGCCATCATGAAAAGTCCACAAAGCACAAGTAGA...GCATGCCTTCTCGTTAAGTTGACAAAATCTTGACAGGAGTAAAAGATAATCGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp CAGGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGTTCCCAAGGAAAGCTTaGTCACGATCTTTATTAAAA +
Preference number: 4 (lower is better)
Translates to: QEFILTASTAKWLMCILRFPRKA*SRSLLK
Trigger: TTTTAATAAAGATCGTGACCAAGCTTTCCTTGGGAA...CCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp GGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAAGATTACCATGAGCTTTaGTATTTCCTCACATCACAT +
Preference number: 4 (lower is better)
Translates to: GIYSDSFNSKVVDVYPKEDYHEL*YFLTSH
Trigger: ATGTGATGTGAGGAAATACCAAAGCTCATGGTAATC...TTCCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 72 bp TCATATTTTGACTTTAGAAAGAGCATCAGGCAAGGTTaGACAAGACCAAGAACAAGACCAAGAACTGTTTTG +
Preference number: 4 (lower is better)
Translates to: SYFDFRKSIRQG*TRPRTRPRTVL
Trigger: CAAAACAGTTCTTGGTCTTGTTCTTGGTCTTGTCAAACCTTGCCTGATGCTCTTTCTAAAGTCAAAATATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 72 bp TATGAGATACTAAAATTGTATGAGGTTGTGGATCAGTaGCACATTAGTGACATCCATCTTGAGCAGATATGC +
Preference number: 4 (lower is better)
Translates to: YEILKLYEVVDQ*HISDIHLEQIC
Trigger: GCATATCTGCTCAAGATGGATGTCACTAATGTGCAACTGATCCACAACCTCATACAATTTTAGTATCTCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 72 bp CAGGACCAATTGTTCCAGTTAATACACGTAACTTCTTaGCTTATAGGCATGGAAAGACCAAATTATTCAGTG +
Preference number: 4 (lower is better)
Translates to: QDQLFQLIHVTS*LIGMERPNYSV
Trigger: CACTGAATAATTTGGTCTTTCCATGCCTATAAGCAAAGAAGTTACGTGTATTAACTGGAACAATTGGTCCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 72 bp TATCAAAATTGGAGCACTCCCTGTAGCCAAAATATTTaGCATGGGTGCTATGATGCAAAGGAATTGGTAAAT +
Preference number: 4 (lower is better)
Translates to: YQNWSTPCSQNI*HGCYDAKELVN
Trigger: ATTTACCAATTCCTTTGCATCATAGCACCCATGCAAAATATTTTGGCTACAGGGAGTGCTCCAATTTTGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp TTCGATTATCTTTTACTCCTGTCAAGATTTTGTCAACTTAACGAGAAGGCATGCATAGATACATTTCCTTaGGTGCCTATTGAAAGGATG +
Preference number: 4 (lower is better)
Translates to: FDYLLLLSRFCQLNEKACIDTFP*VPIERM
Trigger: CATCCTTTCAATAGGCACTCAAGGAAATGTATCTAT...GCATGCCTTCTCGTTAAGTTGACAAAATCTTGACAGGAGTAAAAGATAATCGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGAAAAATAGGAATGGATaGCCAAGGGCTTTAAAAGAC +
Preference number: 4 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHEKNRNG*PRALKD
Trigger: GTCTTTTAAAGCCCTTGGTCATCCATTCCTATTTTT...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp TTCGATTATCTTTTACTCCTGTCAAGATTTTGTCAACTTAACGAGAAGGCATGCTTTGTGGACTTTTCATaGTGGCGATATTTTGTTGCA +
Preference number: 4 (lower is better)
Translates to: FDYLLLLSRFCQLNEKACFVDFS*WRYFVA
Trigger: TGCAACAAAATATCGCCATCATGAAAAGTCCACAAA...GCATGCCTTCTCGTTAAGTTGACAAAATCTTGACAGGAGTAAAAGATAATCGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGTATCTACTGAATCTCTaGAAGATTCCTCAACTAGGA +
Preference number: 4 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHEYLLNL*KIPQLG
Trigger: TCCTAGTTGAGGAATCTTTCAGAGATTCAGTAGATA...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGGATACTAAAATTGTATaGGGTTGTGGATCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHEDTKIV*GCGSVA
Trigger: TGCAACTGATCCACAACCTCATACAATTTTAGTATC...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGGAAACATTCTTCCATTaGCTAGTAAGACTTCTAAGC +
Preference number: 4 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHEETFFH*LVRLLS
Trigger: GCTTAGAAGTCTTACTAGTCAATGGAAGAATGTTTC...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR TCA 90 bp AAAATATGCCTAACATTCATAACATGCTATATATACATGGGGTACCTCAGGCACATGCCTTGCCTTAAGTaGAATCATTCTGATTTCATC +
Preference number: 4 (lower is better)
Translates to: KICLTFITCYIYMGYLRHMPCLK*NHSDFI
Trigger: GATGAAATCAGAATGATTTCACTTAAGGCAAGGCAT...GTGCCTGAGGTACCCCATGTATATATAGCATGTTATGAATGTTAGGCATATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp TCAGCTGACATAACAGAACCACTGATCAGTTGTTTTTGTCTAAATAGCAGGAAGTTTTCTTTCTATACATaGTTCAGCCTACCTCACAAT +
Preference number: 4 (lower is better)
Translates to: SADITEPLISCFCLNSRKFSFYT*FSLPHN
Trigger: ATTGTGAGGTAGGCTGAAGCATGTATAGAAAGAAAA...CTTCCTGCTATTTAGACAAAAACAACTGATCAGTGGTTCTGTTATGTCAGCTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp AAAATATGCCTAACATTCATAACATGCTATATATACATGGGGTACCTCAGGCACAAGGTCTGTAACTCTTaGCAAAAGTACCCAAGAATA +
Preference number: 4 (lower is better)
Translates to: KICLTFITCYIYMGYLRHKVCNS*QKYPRI
Trigger: TATTCTTGGGTACTTTTGCCAAGAGTTACAGACCTT...GTGCCTGAGGTACCCCATGTATATATAGCATGTTATGAATGTTAGGCATATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp GGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAATTTAAATGCCGTAATTaGTGGTGTACTAGCATCAAA +
Preference number: 4 (lower is better)
Translates to: GIYSDSFNSKVVDVYPKEFKCRN*WCTSIK
Trigger: TTTGATGCTAGTACACCACCAATTACGGCATTTAAA...TTCCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp TTCGATTATCTTTTACTCCTGTCAAGATTTTGTCAACTTAACGAGAAGGCATGCAATCTCCTACGAGATTaGCAAAGTTTTACAAACTGC +
Preference number: 4 (lower is better)
Translates to: FDYLLLLSRFCQLNEKACNLLRD*QSFTNC
Trigger: GCAGTTTGTAAAACTTTGCCAATCTCGTAGGAGATT...GCATGCCTTCTCGTTAAGTTGACAAAATCTTGACAGGAGTAAAAGATAATCGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp TGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTGCTCAACTTTATGGTTaGTTGATCAAAACTCATGAT +
Preference number: 4 (lower is better)
Translates to: CILRKNHSFFLPWHWVLIAQLYG*LIKTHD
Trigger: ATCATGAGTTTTGATCAACCAACCATAAAGTTGAGC...AATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGCACACATATCCATCTTaGTTCCTGATTATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHEHTYPS*FLIIFL
Trigger: CAAGAAGATAATCAGGAACCAAGATGGATATGTGTG...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp AAAATATGCCTAACATTCATAACATGCTATATATACATGGGGTACCTCAGGCACTTATCAAATGTAATCTaGGTGTCTTTATGTGCACAC +
Preference number: 4 (lower is better)
Translates to: KICLTFITCYIYMGYLRHLSNVI*VSLCAH
Trigger: GTGTGCACATAAAGACACGCAGATTACATTTGATAA...GTGCCTGAGGTACCCCATGTATATATAGCATGTTATGAATGTTAGGCATATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR GCA 90 bp TTCGATTATCTTTTACTCCTGTCAAGATTTTGTCAACTTAACGAGAAGGCATGCATGTGGTACCTTGAATaGCTAATGACCTTTAATACT +
Preference number: 4 (lower is better)
Translates to: FDYLLLLSRFCQLNEKACMWYLE*LMTFNT
Trigger: AGTATTAAAGGTCATTAGGCATTCAAGGTACCACAT...GCATGCCTTCTCGTTAAGTTGACAAAATCTTGACAGGAGTAAAAGATAATCGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp TTCGATTATCTTTTACTCCTGTCAAGATTTTGTCAACTTAACGAGAAGGCATGCTACTTCTTACCAGACTaGTCACGTACTTTTTGTTTT +
Preference number: 4 (lower is better)
Translates to: FDYLLLLSRFCQLNEKACYFLPD*SRTFCF
Trigger: AAAACAAAAAGTACGTGACCAGTCTGGTAAGAAGTA...GCATGCCTTCTCGTTAAGTTGACAAAATCTTGACAGGAGTAAAAGATAATCGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CCA 90 bp AAAATATGCCTAACATTCATAACATGCTATATATACATGGGGTACCTCAGGCACAAGATTCAAGTACTATaGTCCATTCTACCCACTTTT +
Preference number: 4 (lower is better)
Translates to: KICLTFITCYIYMGYLRHKIQVL*SILPTF
Trigger: AAAAGTGGGTAGAATGGACCATAGTACTTGAATCTT...GTGCCTGAGGTACCCCATGTATATATAGCATGTTATGAATGTTAGGCATATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 72 bp ACTGTCGAAATGTTTAACTTTGTGTCTACTTGTGCTTaGTGGACTTTTCATGATGGCGATATTTTGTTGCAA +
Preference number: 4 (lower is better)
Translates to: TVEMFNFVSTCA*WTFHDGDILLQ
Trigger: TTGCAACAAAATATCGCCATCATGAAAAGTCCACAAAGCACAAGTAGACACAAAGTTAAACATTTCGACAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
3UTR CAA 72 bp CTCTTCTCTATAGTTTCTCTGAGAAGCAGGTATGGGTaGAAGAAAAAGTGCCAATTAAGTAGGATGAATTTA +
Preference number: 4 (lower is better)
Translates to: LFSIVSLRSRYG*KKKCQLSRMNL
Trigger: TAAATTCATCCTACTTAATTGGCACTTTTTCTTCAACCCATACCTGCTTCTCAGAGAAACTATAGAGAAGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS GCA 90 bp GGCTCGGTGGACACGGCGGCGGGAGCGGAGATGCCGCCTCGCCGCTaGTGGGCACCAGGGACGGAGGACCAGAGGCGCACCTCGGAAAGG +
Preference number: 5 (lower is better)
Translates to: GSVDTAAGAEMPPRR*WAPGTEDQRRTSER
Trigger: CCTTTCCGAGGTGCGCCTCTGGTCCTCCGTCCCTGGTGCCCAGCAGCGGCGAGGCGGCATCTCCGCTCCCGCCGCCGTGTCCACCGAGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000556335.1
ENST00000557419.5
CDS GCA 90 bp CACCCTGATCCCAGGGCTCGGTGGACACGGCGGCGGGAGCGGAGATaGCGCCTCGCCGCTGCTGGGCACCAGGGACGGAGGACCAGAGGC +
Preference number: 5 (lower is better)
Translates to: HPDPRARWTRRRERR*RLAAAGHQGRRTRG
Trigger: GCCTCTGGTCCTCCGTCCCTGGTGCCCAGCAGCGGCGAGGCGGCATCTCCGCTCCCGCCGCCGTGTCCACCGAGCCCTGGGATCAGGGTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000556335.1
ENST00000557419.5
CDS CCA 90 bp TCGGTGGACACGGCGGCGGGAGCGGAGATGCCGCCTCGCCGCTGCTaGGCACCAGGGACGGAGGACCAGAGGCGCACCTCGGAAAGGAGT +
Preference number: 5 (lower is better)
Translates to: SVDTAAGAEMPPRRC*APGTEDQRRTSERS
Trigger: ACTCCTTTCCGAGGTGCGCCTCTGGTCCTCCGTCCCTGGTGCCCAGCAGCGGCGAGGCGGCATCTCCGCTCCCGCCGCCGTGTCCACCGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000556335.1
ENST00000557419.5
CDS CCA 90 bp CTCCTGCCCATCGTTGAGAACTGCCACCCTGATCCCAGGGCTCGGTaGACACGGCGGCGGGAGCGGAGATGCCGCCTCGCCGCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: LLPIVENCHPDPRAR*TRRRERRCRLAAAG
Trigger: CCCAGCAGCGGCGAGGCGGCATCTCCGCTCCCGCCGCCGTGTCCACCGAGCCCTGGGATCAGGGTGGCAGTTCTCAACGATGGGCAGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000556335.1
ENST00000557419.5
CDS GCA 90 bp TCACCGCGCCCCCGATCAAGCCCGCCAGCAGAAAGGGGGAGCCCATaGTGTGGGACGTCGTCTGCTCATGGCTGGACGCTGTGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: SPRPRSSPPAERGSP*CGTSSAHGWTLCCC
Trigger: GCAGCAACACAGCGTCCAGCCATGAGCAGACGACGTCCCACAGCATGGGCTCCCCCTTTCTGCTGGCGGGCTTGATCGGGGGCGCGGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS CCA 90 bp GCGCCCCCGATCAAGCCCGCCAGCAGAAAGGGGGAGCCCATGCTGTaGGACGTCGTCTGCTCATGGCTGGACGCTGTGTTGCTGCCGTTG +
Preference number: 5 (lower is better)
Translates to: APPIKPASRKGEPML*DVVCSWLDAVLLPL
Trigger: CAACGGCAGCAACACAGCGTCCAGCCATGAGCAGACGACGTCCCACAGCATGGGCTCCCCCTTTCTGCTGGCGGGCTTGATCGGGGGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS CCA 90 bp CGCCACCTCCGCAGGCGCTCTGACGGCTGCGTCTTCTCCTTGCAATaGGCTCATCCGAATCCGACAGGGTCAGGGAGGTGGAAAGGGAAG +
Preference number: 5 (lower is better)
Translates to: RHLRRRSDGCVFSLQ*AHPNPTGSGRWKGK
Trigger: CTTCCCTTTCCACCTCCCTGACCCTGTCGGATTCGGATGAGCCCATTGCAAGGAGAAGACGCAGCCGTCAGAGCGCCTGCGGAGGTGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557419.5
CDS GCA 90 bp AAAGGTCTCCGTGTCTTACCTGTTCGATCCGGATTCCGCCTCGTATaGTCTCCAAGCCTTCGCCACCTCCGCAGGCGCTCTGACGGCTGC +
Preference number: 5 (lower is better)
Translates to: KGLRVLPVRSGFRLV*SPSLRHLRRRSDGC
Trigger: GCAGCCGTCAGAGCGCCTGCGGAGGTGGCGAAGGCTTGGAGAGCATACGAGGCGGAATCCGGATCGAACAGGTAAGACACGGAGACCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557419.5
CDS CCA 90 bp ACGGAGGACCAGAGGCGCACCTCGGAAAGGAGTAGCTCAGCGCCTTaGCGCGGAGATTTGCGGGCACTGATGATATCTCGAGCGCTCGTT +
Preference number: 5 (lower is better)
Translates to: TEDQRRTSERSSSAP*RGDLRALMISRALV
Trigger: AACGAGCGCTCGAGATATCATCAGTGCCCGCAAATCTCCGCGCCAAGGCGCTGAGCTACTCCTTTCCGAGGTGCGCCTCTGGTCCTCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330753.6
ENST00000556335.1
ENST00000557419.5
CDS CCA 90 bp GCAGAAAGGGGGAGCCCATGCTGTGGGACGTCGTCTGCTCATGGCTaGACGCTGTGTTGCTGCCGTTGTTCAGATAGGAGGCATGGGTGG +
Preference number: 5 (lower is better)
Translates to: AERGSPCCGTSSAHG*TLCCCRCSDRRHGW
Trigger: CCACCCATGCCTCCTATCTGAACAACGGCAGCAACACAGCGTCCAGCCATGAGCAGACGACGTCCCACAGCATGGGCTCCCCCTTTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS GCA 90 bp AGCCCATGCTGTGGGACGTCGTCTGCTCATGGCTGGACGCTGTGTTaGTGCCGTTGTTCAGATAGGAGGCATGGGTGGTGGCCTCTGAAC +
Preference number: 5 (lower is better)
Translates to: SPCCGTSSAHGWTLC*CRCSDRRHGWWPLN
Trigger: GTTCAGAGGCCACCACCCATGCCTCCTATCTGAACAACGGCAGCAACACAGCGTCCAGCCATGAGCAGACGACGTCCCACAGCATGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS CCA 90 bp GCAACGCAGCCCCTTTTACCTGACGGCTGCGTCTTCTCCTTGCAATaGGCTCATCCGAATCCGACAGGGTCAGGGAGGTGGAAAGGGAAG +
Preference number: 5 (lower is better)
Translates to: ATQPLLPDGCVFSLQ*AHPNPTGSGRWKGK
Trigger: CTTCCCTTTCCACCTCCCTGACCCTGTCGGATTCGGATGAGCCCATTGCAAGGAGAAGACGCAGCCGTCAGGTAAAAGGGGCTGCGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554746.1
CDS GCA 90 bp CCATGCTGTGGGACGTCGTCTGCTCATGGCTGGACGCTGTGTTGCTaGCGTTGTTCAGATAGGAGGCATGGGTGGTGGCCTCTGAACAAA +
Preference number: 5 (lower is better)
Translates to: PCCGTSSAHGWTLCC*RCSDRRHGWWPLNK
Trigger: TTTGTTCAGAGGCCACCACCCATGCCTCCTATCTGAACAACGGCAGCAACACAGCGTCCAGCCATGAGCAGACGACGTCCCACAGCATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS GCA 90 bp GGGCCTCTGGCTGTCACGTATGGCAGTGCTCCAGGTCTGGCACGCTaGTGTTGCAGTATCGCATGTTGTTGGGGATATGGCAGTCTGTGT +
Preference number: 5 (lower is better)
Translates to: GPLAVTYGSAPGLAR*CCSIACCWGYGSLC
Trigger: ACACAGACTGCCATATCCCCAACAACATGCGATACTGCAACAGCAGCGTGCCAGACCTGGAGCACTGCCATACGTGACAGCCAGAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS GCA 90 bp ATCTGGCAACGCAGCCCCTTTTACCTGACGGCTGCGTCTTCTCCTTaGAATGGGCTCATCCGAATCCGACAGGGTCAGGGAGGTGGAAAG +
Preference number: 5 (lower is better)
Translates to: IWQRSPFYLTAASSP*NGLIRIRQGQGGGK
Trigger: CTTTCCACCTCCCTGACCCTGTCGGATTCGGATGAGCCCATTGCAAGGAGAAGACGCAGCCGTCAGGTAAAAGGGGCTGCGTTGCCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554746.1
CDS TCA 90 bp ACCCCGACCTCAGCTTGCAACCTTGATCTTGGGCTTGATTATAAATaGCGAAAGACCGCGGCAGCCTTCAAAGTGCGGGAGCGAGCCCCG +
Preference number: 5 (lower is better)
Translates to: TPTSACNLDLGLDYK*RKTAAAFKVRERAP
Trigger: CGGGGCTCGCTCCCGCACTTTGAAGGCTGCCGCGGTCTTTCGTCATTTATAATCAAGCCCAAGATCAAGGTTGCAAGCTGAGGTCGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684303.1
CDS CCA 90 bp ATAACGCTGGGCCTCTGGCTGTCACGTATGGCAGTGCTCCAGGTCTaGCACGCTGCTGTTGCAGTATCGCATGTTGTTGGGGATATGGCA +
Preference number: 5 (lower is better)
Translates to: ITLGLWLSRMAVLQV*HAAVAVSHVVGDMA
Trigger: TGCCATATCCCCAACAACATGCGATACTGCAACAGCAGCGTGCCAGACCTGGAGCACTGCCATACGTGACAGCCAGAGGCCCAGCGTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS TCA 90 bp GATTTGCGGGCACTGATGATATCTCGAGCGCTCGTTCCTCCGCGGTaGCAATGGATAATGCCAAACGCGCAAGTGACGGCGACAGGTTTC +
Preference number: 5 (lower is better)
Translates to: DLRALMISRALVPPR*QWIMPNAQVTATGF
Trigger: GAAACCTGTCGCCGTCACTTGCGCGTTTGGCATTATCCATTGTCACCGCGGAGGAACGAGCGCTCGAGATATCATCAGTGCCCGCAAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000556335.1
CDS GCA 90 bp AGCTCAATCTGCAATCTGGCAACGCAGCCCCTTTTACCTGACGGCTaGGTCTTCTCCTTGCAATGGGCTCATCCGAATCCGACAGGGTCA +
Preference number: 5 (lower is better)
Translates to: SSICNLATQPLLPDG*VFSLQWAHPNPTGS
Trigger: TGACCCTGTCGGATTCGGATGAGCCCATTGCAAGGAGAAGACGCAGCCGTCAGGTAAAAGGGGCTGCGTTGCCAGATTGCAGATTGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554746.1
CDS CCA 90 bp CAGTCGGGTCCATTAAAATCTGACGGCTGCGTCTTCTCCTTGCAATaGGCTCATCCGAATCCGACAGGGTCAGGGAGGTGGAAAGGGAAG +
Preference number: 5 (lower is better)
Translates to: QSGPLKSDGCVFSLQ*AHPNPTGSGRWKGK
Trigger: CTTCCCTTTCCACCTCCCTGACCCTGTCGGATTCGGATGAGCCCATTGCAAGGAGAAGACGCAGCCGTCAGATTTTAATGGACCCGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556335.1
CDS CCA 90 bp GTTAAGCTCAATCTGCAATCTGACGGCTGCGTCTTCTCCTTGCAATaGGCTCATCCGAATCCGACAGGGTCAGGGAGGTGGAAAGGGAAG +
Preference number: 5 (lower is better)
Translates to: VKLNLQSDGCVFSLQ*AHPNPTGSGRWKGK
Trigger: CTTCCCTTTCCACCTCCCTGACCCTGTCGGATTCGGATGAGCCCATTGCAAGGAGAAGACGCAGCCGTCAGATTGCAGATTGAGCTTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS CCA 90 bp GTATCAAGTATGGGTCCAGCCCGTCCCAGTTATCCTCTTCCCCTATaGCTTCATTCCCGTTGTCAGTACCCCGACCTCAGCTTGCAACCT +
Preference number: 5 (lower is better)
Translates to: VSSMGPARPSYPLPL*LHSRCQYPDLSLQP
Trigger: AGGTTGCAAGCTGAGGTCGGGGTACTGACAACGGGAATGAAGCCATAGGGGAAGAGGATAACTGGGACGGGCTGGACCCATACTTGATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684303.1
CDS-3UTR CAA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTCCCTCGGCGATACCCTaGTTGGTCAGGAGGTTCCCG +
Preference number: 5 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLPSAIP*LVRRFP
Trigger: CGGGAACCTCCTGACCAACAAGGGTATCGCCGAGGG...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS TCA 90 bp GTGGAGGTAGAGTACAGTTACGCCCTCCGGGATCCCAAGAGGCACTaGGGTCAAGCTTCGCTCATTACAGTAGACAAAGTTCCTGTCGCA +
Preference number: 5 (lower is better)
Translates to: VEVEYSYALRDPKRH*GQASLITVDKVPVA
Trigger: TGCGACAGGAACTTTGTCTACTGTAATGAGCGAAGCTTGACCTCAGTGCCTCTTGGGATCCCGGAGGGCGTAACTGTACTCTACCTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
ENST00000684303.1
CDS TCA 90 bp CTGTCAAAGGAATGTGGTTTATCTGGTTGTCCTGCAAATAGAGCCTaGTCAGATGCGTACCTGGGAGATCGGGAGGAGGGTGGGACAGCG +
Preference number: 5 (lower is better)
Translates to: LSKECGLSGCPANRA*SDAYLGDREEGGTA
Trigger: CGCTGTCCCACCCTCCTCCCGATCTCCCAGGTACGCATCTGATCAGGCTCTATTTGCAGGACAACCAGATAAACCACATTCCTTTGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS TCA 90 bp TTAACCAGGCTCAGGTGTTGCTTCTCACCGCTGACTATGCGCTCCTaGACGATGCCCCCTACTAAACTGTGGCCCATTTTCACCCATGTG +
Preference number: 5 (lower is better)
Translates to: LTRLRCCFSPLTMRS*TMPPTKLWPIFTHV
Trigger: CACATGGGTGAAAATGGGCCACAGTTTAGTAGGGGGCATCGTTCAGGAGCGCATAGTCAGCGGTGAGAAGCAACACCTGAGCCTGGTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS CCA 90 bp TTTCGATGTGGTAGGAGTTGGAGGCGTGTAGCTTCTGCTAGGGTTTaGAATAGAGAGGGTGGGAGGCTGAGTGGTCGGAGAAGCTGTACT +
Preference number: 5 (lower is better)
Translates to: FRCGRSWRRVASARV*NREGGRLSGRRSCT
Trigger: AGTACAGCTTCTCCGACCACTCAGCCTCCCACCCTCTCTATTCCAAACCCTAGCAGAAGCTACACGCCTCCAACTCCTACCACATCGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS-3UTR CAA 90 bp GGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTTCGGCGATACCCTTGTaGGTCAGGAGGTTCCCGTCC +
Preference number: 5 (lower is better)
Translates to: GAFSISHTGSNQGNYLHSSAIPL*VRRFPS
Trigger: GGACGGGAACCTCCTGACCAACAAGGGTATCGCCGA...AGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTACCTGAGGTCAGGAGTTaGAGAGCAGCCTGGCTAATA +
Preference number: 5 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLPEVRS*RAAWLI
Trigger: TATTAGCCAGGCTGCTCTCAAACTCCTGACCTCAGG...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS TCA 90 bp TGTGTTGCTGCCGTTGTTCAGATAGGAGGCATGGGTGGTGGCCTCTaGACAAATGGTGTCTTCTACCGCGCGGTAGTTAAAAGCATCCAG +
Preference number: 5 (lower is better)
Translates to: CVAAVVQIGGMGGGL*TNGVFYRAVVKSIQ
Trigger: CTGGATGCTTTTAACTACCGCGCGGTAGAAGACACCATTTGTTCAGAGGCCACCACCCATGCCTCCTATCTGAACAACGGCAGCAACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS GCA 90 bp CGCCCTTCTTCCACAACTGTAAGTTTCCTGAGGCCTCCCCAGCCATaGTTTCTGTGCAGCCTGAGGAACTGTGAGTCAATTAAACCTCTT +
Preference number: 5 (lower is better)
Translates to: RPSSTTVSFLRPPQP*FLCSLRNCESIKPL
Trigger: AAGAGGTTTAATTGACTCACAGTTCCTCAGGCTGCACAGAAAGCATGGCTGGGGAGGCCTCAGGAAACTTACAGTTGTGGAAGAAGGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684438.1
CDS CCA 90 bp CAACAGGTGATGGCAAGTTATCAGCCGTGTCAACACAAGCCCAAGTaGGCAGGCAGAACTCTCTTCTTCTTTTGTAGGTCAAGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: QQVMASYQPCQHKPK*AGRTLFFFCRSSQP
Trigger: AGGCTGGCTTGACCTACAAAAGAAGAAGAGAGTTCTGCCTGCCCACTTGGGCTTGTGTTGACACGGCTGATAACTTGCCATCACCTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
ENST00000684303.1
CDS-3UTR CAA 90 bp CCTGTCTTCCGGACCTGGAGGTATAGGAATAGTGTGAAACTATCGGGCCATTTCGGGGAATTCGTCCAGTaGGTTGCCATACAGGTAGAC +
Preference number: 5 (lower is better)
Translates to: PVFRTWRYRNSVKLSGHFGEFVQ*VAIQVD
Trigger: GTCTACCTGTATGGCAACCAACTGGACGAATTCCCC...GAAATGGCCCGATAGTTTCACACTATTCCTATACCTCCAGGTCCGGAAGACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp GCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTTCGGCGATACCCTTGTaGGTCAGGAGGTTCCCGTCC +
Preference number: 5 (lower is better)
Translates to: ALALGSHCTTLYSTSATFSAIPL*VRRFPS
Trigger: GGACGGGAACCTCCTGACCAACAAGGGTATCGCCGA...AAAAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp GAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGGGCCTCTGGCTATCCGCAGTTGGTTGTaGGATATATCCAGCCGTTCC +
Preference number: 5 (lower is better)
Translates to: ECVLKSLIVRLDNAGPLAIRSWL*DISSRS
Trigger: GGAACGGCTGGATATATCCAACAACCAACTGCGGAT...AGCCAGAGGCCCAGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp GCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTGGCCATCCCCCGGACTaGTTCAGGACCTTGGCACAT +
Preference number: 5 (lower is better)
Translates to: ALALGSHCTTLYSTSATFGHPPD*FRTLAH
Trigger: ATGTGCCAAGGTCCTGAACAAGTCCGGGGGATGGCC...AAAAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp CTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTTACACGTATCTGCCTGCGATaGTCCCATGCAGTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: LSAFPTQGQIRVTTSILTRICLR*SHAVGC
Trigger: GCAGCCCACTGCATGGGACAATCGCAGGCAGATACG...TGTAAGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp CCTGTCTTCCGGACCTGGAGGTATAGGAATAGTGTGAAACTATCGGGCCATTTCAGGCAGGAGAATTCCTaGAACCTGGGAGAAGGAGGT +
Preference number: 5 (lower is better)
Translates to: PVFRTWRYRNSVKLSGHFRQENS*NLGEGG
Trigger: ACCTCCTTCTCCCAGGTTCAAGGAATTCTCCTGCCT...GAAATGGCCCGATAGTTTCACACTATTCCTATACCTCCAGGTCCGGAAGACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp CTGGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTGCAGGAGAGTATCTCTaGAGCCCAGGAGTTGGAGTC +
Preference number: 5 (lower is better)
Translates to: LVLSAFPTQGQIRVTTSIAGEYL*SPGVGV
Trigger: GACTCCAACTCCTGGGCTCAAGAGATACTCTCCTGC...AATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS TCA 90 bp CGAGCAGTGAGCTGCTTCAGGTTGGAGAGATTATCAAAAACCCCTTaGGTCAGCATCCGCAGTTGGTTGTTGGATATATCCAGCCGTTCC +
Preference number: 5 (lower is better)
Translates to: RAVSCFRLERLSKTP*VSIRSWLLDISSRS
Trigger: GGAACGGCTGGATATATCCAACAACCAACTGCGGATGCTGACTCAAGGGGTTTTTGATAATCTCTCCAACCTGAAGCAGCTCACTGCTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS GCA 90 bp AATACCTCCTCACATCAAAGGCGCCATAATCAGCCCTCCAAATCTTaGCATCAACCCAAAGGTCTCCGTGTCTTACCTGTTCGATCCGGA +
Preference number: 5 (lower is better)
Translates to: NTSSHQRRHNQPSKS*HQPKGLRVLPVRSG
Trigger: TCCGGATCGAACAGGTAAGACACGGAGACCTTTGGGTTGATGGCAAGATTTGGAGGGCTGATTATGGCGCCTTTGATGTGAGGAGGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557419.5
CDS CCA 90 bp GACAGCGAATTACGTACAATTGAAAATTCCTTGAGCTTGGTGAGATaGCTGAAGGTGCCCTCGGCGATACCCTTGTTGGTCAGGAGGTTC +
Preference number: 5 (lower is better)
Translates to: DSELRTIENSLSLVR*LKVPSAIPLLVRRF
Trigger: GAACCTCCTGACCAACAAGGGTATCGCCGAGGGCACCTTCAGCCATCTCACCAAGCTCAAGGAATTTTCAATTGTACGTAATTCGCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS-3UTR CAA 90 bp GCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTCCTGTGTTGCCCTCTTaGCTGCTGTCCTCCATGTGC +
Preference number: 5 (lower is better)
Translates to: ALALGSHCTTLYSTSATFPVLPS*LLSSMC
Trigger: GCACATGGAGGACAGCAGCAAAGAGGGCAACACAGG...AAAAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp GGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTCTGGATGGGGTTCTGTaGAAGTCCAGAACTCCAGCT +
Preference number: 5 (lower is better)
Translates to: GAFSISHTGSNQGNYLHSLDGVL*KSRTPA
Trigger: AGCTGGAGTTCTGGACTTCAACAGAACCCCATCCAG...AGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp CAGGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGCCCTCGGCGATACCCTaGTTGGTCAGGAGGTTCCCG +
Preference number: 5 (lower is better)
Translates to: QEFILTASTAKWLMCILRPSAIP*LVRRFP
Trigger: CGGGAACCTCCTGACCAACAAGGGTATCGCCGAGGG...CCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTATGAGCGACACACACTaGGCAATGCCTTCACCTTGC +
Preference number: 5 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLMSDTH*AMPSPC
Trigger: GCAAGGTGAAGGCATTGCCAAGTGTGTGTCGCTCAT...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTCGGGCTTTCACCATGTaGGCCAAGCTAGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLRAFTM*AKLVSN
Trigger: GTTTGAGACTAGCTTGGCCAACATGGTGAAAGCCCG...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp CCTGTCTTCCGGACCTGGAGGTATAGGAATAGTGTGAAACTATCGGGCCATTTCGGGGCTCAAATCTCTTaGCAGAGATGCTCGACTCTA +
Preference number: 5 (lower is better)
Translates to: PVFRTWRYRNSVKLSGHFGAQIS*QRCSTL
Trigger: TAGAGTCGAGCATCTCTGCAAAGAGATTTGAGCCCC...GAAATGGCCCGATAGTTTCACACTATTCCTATACCTCCAGGTCCGGAAGACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp CCTGTCTTCCGGACCTGGAGGTATAGGAATAGTGTGAAACTATCGGGCCATTTCGTGTCACTGTGTCTCTaGGACAGAGTATGTTGGTCC +
Preference number: 5 (lower is better)
Translates to: PVFRTWRYRNSVKLSGHFVSLCL*DRVCWS
Trigger: GGACCAACATACTCTGTCCAAGAGACACAGTGACAC...GAAATGGCCCGATAGTTTCACACTATTCCTATACCTCCAGGTCCGGAAGACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS TCA 90 bp AGCTCTTGCAAGTCCACAGGAAGCCCAACAGGCACACTGCTCAGGTaGTTCTTAGACAAAAACAACAATTTGAGGCTAATAGCCTCCCGG +
Preference number: 5 (lower is better)
Translates to: SSCKSTGSPTGTLLR*FLDKNNNLRLIASR
Trigger: CCGGGAGGCTATTAGCCTCAAATTGTTGTTTTTGTCTAAGAATCACCTGAGCAGTGTGCCTGTTGGGCTTCCTGTGGACTTGCAAGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS CCA 90 bp AGGAGGTTCCCGTCCACAATAAGACGCTCCAAGCTCGTGAGATTCTaGAAGGCCATGTCGGATATGACAGCAATTCGATTTTCATCCACT +
Preference number: 5 (lower is better)
Translates to: RRFPSTIRRSKLVRF*KAMSDMTAIRFSST
Trigger: AGTGGATGAAAATCGAATTGCTGTCATATCCGACATGGCCTTCCAGAATCTCACGAGCTTGGAGCGTCTTATTGTGGACGGGAACCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS-3UTR CAA 90 bp TTGCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTCATGGCTGGGCCACTTaGTGGTCTGTAGGCCCATTT +
Preference number: 5 (lower is better)
Translates to: LPWHWVLIVQPCTVLQQLHGWAT*WSVGPF
Trigger: AAATGGGCCTACAGACCACAAAGTGGCCCAGCCATG...AAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp GCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTCATGGCTGGGCCACTTaGTGGTCTGTAGGCCCATTT +
Preference number: 5 (lower is better)
Translates to: ALALGSHCTTLYSTSATFHGWAT*WSVGPF
Trigger: AAATGGGCCTACAGACCACAAAGTGGCCCAGCCATG...AAAAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp TTGCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTGACTTGTTCAGGACCTaGGCACATGAAACCCCGCAC +
Preference number: 5 (lower is better)
Translates to: LPWHWVLIVQPCTVLQQLDLFRT*AHETPH
Trigger: GTGCGGGGTTTCATGTGCCAAGGTCCTGAACAAGTC...AAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp GAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGGGCCTCTGGCTAGAGAGCCAGCTGACTaGAATGGAAGTATCATTCAC +
Preference number: 5 (lower is better)
Translates to: ECVLKSLIVRLDNAGPLAREPAD*NGSIIH
Trigger: GTGAATGATACTTCCATTCAAGTCAGCTGGCTCTCT...AGCCAGAGGCCCAGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTTTCCGCCGGCCCCGGTaGTATTTCCACTTCTGGGAG +
Preference number: 5 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVFRRPR*YFHFWE
Trigger: CTCCCAGAAGTGGAAATACAACCGGGGCCGGCGGAA...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp CTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTTACAGTGCCTGATGGCCTCTaGGGCCCAAGACTGACATTA +
Preference number: 5 (lower is better)
Translates to: LSAFPTQGQIRVTTSILTVPDGL*GPRLTL
Trigger: TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCAC...TGTAAGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATGCAGGCAACTTGATCTaGGGCTTCACAGCCTCAAGA +
Preference number: 5 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDAGNLI*GFTASR
Trigger: TCTTGAGGCTGTGAAGCCCAAGATCAAGTTGCCTGC...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS TCA 90 bp CCTTCCCTTAATAAGTTCATCTATGTAGGAAGAGGACAAGTGCCCTaGCTTCTGGCTGTCCACGTAAGTGTCAAATGTAGGGGCCCTTTC +
Preference number: 5 (lower is better)
Translates to: PSLNKFIYVGRGQVP*LLAVHVSVKCRGPF
Trigger: GAAAGGGCCCCTACATTTGACACTTACGTGGACAGCCAGAAGTCAGGGCACTTGTCCTCTTCCTACATAGATGAACTTATTAAGGGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684438.1
CDS CCA 90 bp ATCATTCACAAAATGGATAGAGAGCTGGATCCGTTCAGAAATAGGTaGGGTCACTCTTTCTCTGCCATCCCAGTCAGGAATCGTGGGAAG +
Preference number: 5 (lower is better)
Translates to: IIHKMDRELDPFRNR*GHSFSAIPVRNRGK
Trigger: CTTCCCACGATTCCTGACTGGGATGGCAGAGAAAGAGTGACCCCACCTATTTCTGAACGGATCCAGCTCTCTATCCATTTTGTGAATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS-3UTR CAA 90 bp TTGCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTGGGGAATTCGTCCAGTaGGTTGCCATACAGGTAGAC +
Preference number: 5 (lower is better)
Translates to: LPWHWVLIVQPCTVLQQLGEFVQ*VAIQVD
Trigger: GTCTACCTGTATGGCAACCAACTGGACGAATTCCCC...AAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTGAAAATTCCTTGAGCTaGGTGAGATGGCTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLENSLS*VRWLKV
Trigger: CACCTTCAGCCATCTCACCAAGCTCAAGGAATTTTC...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp ATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTGTATTCCGCCGGCCCCGGTaGTATTTCCACTTCTGGGAG +
Preference number: 5 (lower is better)
Translates to: ILRKNHSFFLPWHWVLIVFRRPR*YFHFWE
Trigger: CTCCCAGAAGTGGAAATACAACCGGGGCCGGCGGAA...TACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp CTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTTACATCTGAGTCACCTCATTaGGCCAGGCAGCATCAAGCT +
Preference number: 5 (lower is better)
Translates to: LSAFPTQGQIRVTTSILTSESPH*ARQHQA
Trigger: AGCTTGATGCTGCCTGGCCAAATGAGGTGACTCAGA...TGTAAGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp TTGCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTCCTGTTGCAATGGCCTaGCTTTGTGCTCTTCTGGTG +
Preference number: 5 (lower is better)
Translates to: LPWHWVLIVQPCTVLQQLPVAMA*LCALLV
Trigger: CACCAGAAGAGCACAAAGCAAGGCCATTGCAACAGG...AAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp CTGGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCACTTCACTTCTACCTaGAAAATCCTGCACACGTGC +
Preference number: 5 (lower is better)
Translates to: LVLSAFPTQGQIRVTTSIHFTST*KILHTC
Trigger: GCACGTGTGCAGGATTTTCAAGGTAGAAGTGAAGTG...AATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTACTTCTGAAAGAAAACTaGGTATCTTGGGTATTCCTC +
Preference number: 5 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLLLKEN*VSWVFL
Trigger: GAGGAATACCCAAGATACCAAGTTTTCTTTCAGAAG...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS GCA 90 bp CTGAAATATTCCCTATGTACAGGCAGAGAAGAGCAGGTAGCCAAGTaGCACTTTGGTGTTCTGCCATGTCAACATTCAAAACAGGGCCAT +
Preference number: 5 (lower is better)
Translates to: LKYSLCTGREEQVAK*HFGVLPCQHSKQGH
Trigger: ATGGCCCTGTTTTGAATGTTGACATGGCAGAACACCAAAGTGGCACTTGGCTACCTGCTCTTCTCTGCCTGTACATAGGGAATATTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684438.1
CDS CCA 90 bp AGAGATTATCAAAAACCCCTTGAGTCAGCATCCGCAGTTGGTTGTTaGATATATCCAGCCGTTCCAGCTTACGCAGATTTGAGAAGGCTG +
Preference number: 5 (lower is better)
Translates to: RDYQKPLESASAVGC*IYPAVPAYADLRRL
Trigger: CAGCCTTCTCAAATCTGCGTAAGCTGGAACGGCTGGATATATCCAACAACCAACTGCGGATGCTGACTCAAGGGGTTTTTGATAATCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS-3UTR CAA 90 bp ATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCGGCTGCGTCTTCTCCTaGCAATGGGCTCATCCGAAT +
Preference number: 5 (lower is better)
Translates to: MCILRKNHSFFLPWHWVLGCVFS*QWAHPN
Trigger: ATTCGGATGAGCCCATTGCAAGGAGAAGACGCAGCC...GAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp ATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTGTACCTGTGTTGCCCTCTTaGCTGCTGTCCTCCATGTGC +
Preference number: 5 (lower is better)
Translates to: ILRKNHSFFLPWHWVLIVPVLPS*LLSSMC
Trigger: GCACATGGAGGACAGCAGCAAAGAGGGCAACACAGG...TACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp ATGTGCACACACGAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTCCAGCTTACGCAGATTaGAGAAGGCTGTCAAAGGAA +
Preference number: 5 (lower is better)
Translates to: MCTHECVLKSLIVRLDNAPAYAD*RRLSKE
Trigger: TTCCTTTGACAGCCTTCTCAAATCTGCGTAAGCTGG...AGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTCGTGTGTGCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp CTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTTACAAGCATCCGCAGTTGGTaGTTGGATATATCCAGCCGT +
Preference number: 5 (lower is better)
Translates to: LSAFPTQGQIRVTTSILTSIRSW*LDISSR
Trigger: ACGGCTGGATATATCCAACAACCAACTGCGGATGCT...TGTAAGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp CTGGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTAGAGAGCCAGCTGACTaGAATGGAAGTATCATTCAC +
Preference number: 5 (lower is better)
Translates to: LVLSAFPTQGQIRVTTSIREPAD*NGSIIH
Trigger: GTGAATGATACTTCCATTCAAGTCAGCTGGCTCTCT...AATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATTTGCAGTATCGCATGTaGTTGGGGATATGGCAGTCT +
Preference number: 5 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDLQYRM*LGIWQS
Trigger: AGACTGCCATATCCCCAACAACATGCGATACTGCAA...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp GGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTCTTTTTGCCTTGGCATaGGGTTCTCATTGTACAACC +
Preference number: 5 (lower is better)
Translates to: GAFSISHTGSNQGNYLHSLFALA*GSHCTT
Trigger: GGTTGTACAATGAGAACCCAATGCCAAGGCAAAAAG...AGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp CTGGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTAATCACTCGTTCTTTTaGCCTTGGCATTGGGTTCTC +
Preference number: 5 (lower is better)
Translates to: LVLSAFPTQGQIRVTTSINHSFF*PWHWVL
Trigger: GAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATT...AATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp GAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGGGCCTCTGGCTCTATCGGGCCATTTCTaGTTTTACCCATATTATTCC +
Preference number: 5 (lower is better)
Translates to: ECVLKSLIVRLDNAGPLALSGHF*FYPYYS
Trigger: GGAATAATATGGGTAAAACAAGAAATGGCCCGATAG...AGCCAGAGGCCCAGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTCACAGCATGAAGATGTaGTCCTCCCTGGTGGGGAAG +
Preference number: 5 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVHSMKM*SSLVGK
Trigger: CTTCCCCACCAGGGAGGACAACATCTTCATGCTGTG...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp ACGAGCTCTAACTCTAGACTTGGAGGCAGTGAGGTGATCAGAACAAGCTATTTTGCACTGTTTTCTGCTTaGCTTTCCCATGCAGCTGGA +
Preference number: 5 (lower is better)
Translates to: TSSNSRLGGSEVIRTSYFALFSA*LSHAAG
Trigger: TCCAGCTGCATGGGAAAGCAAAGCAGAAAACAGTGC...AAAATAGCTTGTTCTGATCACCTCACTGCCTCCAAGTCTAGAGTTAGAGCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTTTCCTTGAGTGCCTATaGAAAGGATGGACAGATGTG +
Preference number: 5 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLFLECL*KGWTDV
Trigger: CACATCTGTCCATCCTTTCAATAGGCACTCAAGGAA...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp GAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGGGCCTCTGGCTTTGTATTTCCTTGTTTaGAGGGAGAAGTGGTTGAAC +
Preference number: 5 (lower is better)
Translates to: ECVLKSLIVRLDNAGPLALYFLV*REKWLN
Trigger: GTTCAACCACTTCTCCCTCAAAACAAGGAAATACAA...AGCCAGAGGCCCAGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp CCTGTCTTCCGGACCTGGAGGTATAGGAATAGTGTGAAACTATCGGGCCATTTCCAGGTGACTTCACCTTaGATTTTCCTACATTTAGGC +
Preference number: 5 (lower is better)
Translates to: PVFRTWRYRNSVKLSGHFQVTSP*IFLHLG
Trigger: GCCTAAATGTAGGAAAATCAAAGGTGAAGTCACCTG...GAAATGGCCCGATAGTTTCACACTATTCCTATACCTCCAGGTCCGGAAGACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp GAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGGGCCTCTGGCTGTATATGTACCCATATaGGCTAATATGGCCCAATCT +
Preference number: 5 (lower is better)
Translates to: ECVLKSLIVRLDNAGPLAVYVPI*ANMAQS
Trigger: AGATTGGGCCATATTAGCCAATATGGGTACATATAC...AGCCAGAGGCCCAGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp ACACTGATTATGGGCACCGTGCCTGATGGCCTCTTGGGCCCAAGACTGACATTAATACACGTAACTTCTTaGCTTATAGGCATGGAAAGA +
Preference number: 5 (lower is better)
Translates to: TLIMGTVPDGLLGPRLTLIHVTS*LIGMER
Trigger: TCTTTCCATGCCTATAAGCAAAGAAGTTACGTGTAT...TAATGTCAGTCTTGGGCCCAAGAGGCCATCAGGCACGGTGCCCATAATCAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp ATGTGCACACACGAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTAAGGAGACAGTTCGCTaGGACCAGGGTTTCTTTCAT +
Preference number: 5 (lower is better)
Translates to: MCTHECVLKSLIVRLDNAKETVR*DQGFFH
Trigger: ATGAAAGAAACCCTGGTCCAAGCGAACTGTCTCCTT...AGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTCGTGTGTGCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp CAGGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGCTCTCCAAGGTGGCTTaGGTGAAGGAGACAGTTCGC +
Preference number: 5 (lower is better)
Translates to: QEFILTASTAKWLMCILRLSKVA*VKETVR
Trigger: GCGAACTGTCTCCTTCACCAAAGCCACCTTGGAGAG...CCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS TCA 90 bp TCTTCAAGCTTCAAGAGCTGGGCAAGAGCAGCCCGTGAAATGGTCTaGATATTGTTTTCCTGCAAATGGAGAACTCTGACATTCTTGGGA +
Preference number: 5 (lower is better)
Translates to: SSSFKSWARAAREMV*ILFSCKWRTLTFLG
Trigger: TCCCAAGAATGTCAGAGTTCTCCATTTGCAGGAAAACAATATTCAGACCATTTCACGGGCTGCTCTTGCCCAGCTCTTGAAGCTTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
ENST00000684303.1
CDS-3UTR CAA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAACCTTGGCGCGGAGATTaGCGGGCACTGATGATATCT +
Preference number: 5 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKPWRGD*RALMIS
Trigger: AGATATCATCAGTGCCCGCAAATCTCCGCGCCAAGG...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp ATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTGTAGGCTGCGTCTTCTCCTaGCAATGGGCTCATCCGAAT +
Preference number: 5 (lower is better)
Translates to: ILRKNHSFFLPWHWVLIVGCVFS*QWAHPN
Trigger: ATTCGGATGAGCCCATTGCAAGGAGAAGACGCAGCC...TACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp CTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTTACATGCACCGACTGTACATaGTGCAGTTCTGCAGGAAAT +
Preference number: 5 (lower is better)
Translates to: LSAFPTQGQIRVTTSILTCTDCT*CSSAGN
Trigger: ATTTCCTGCAGAACTGCACAATGTACAGTCGGTGCA...TGTAAGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp ACGAGCTCTAACTCTAGACTTGGAGGCAGTGAGGTGATCAGAACAAGCTATTTTAGTCAGCATCCGCAGTaGGTTGTTGGATATATCCAG +
Preference number: 5 (lower is better)
Translates to: TSSNSRLGGSEVIRTSYFSQHPQ*VVGYIQ
Trigger: CTGGATATATCCAACAACCAACTGCGGATGCTGACT...AAAATAGCTTGTTCTGATCACCTCACTGCCTCCAAGTCTAGAGTTAGAGCTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATATGAAACCCCGCACGTaGAGAGATGAAGGGATATAT +
Preference number: 5 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDMKPRT*RDEGIY
Trigger: ATATATCCCTTCATCTCTCAACGTGCGGGGTTTCAT...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp ATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTGTAGACTTGTTCAGGACCTaGGCACATGAAACCCCGCAC +
Preference number: 5 (lower is better)
Translates to: ILRKNHSFFLPWHWVLIVDLFRT*AHETPH
Trigger: GTGCGGGGTTTCATGTGCCAAGGTCCTGAACAAGTC...TACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp GCAAAGTGGTTGATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGAACCAGGCTCAGGTGTaGCTTCTCACCGCTGACTAT +
Preference number: 5 (lower is better)
Translates to: AKWLMCILRKNHSFFLPWNQAQV*LLTADY
Trigger: ATAGTCAGCGGTGAGAAGCAACACCTGAGCCTGGTT...CCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACATCAACCACTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTTTTCCAGGGGCCCCATaGTATAGGCATGAAGCAGAC +
Preference number: 5 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVFPGAP*YRHEAD
Trigger: GTCTGCTTCATGCCTATACAATGGGGCCCCTGGAAA...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATCGCATACTGTGGTCTTaGAGCAAGGCTAATTTTGCA +
Preference number: 5 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDRILWS*SKANFA
Trigger: TGCAAAATTAGCCTTGCTCAAAGACCACAGTATGCG...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp ATGTGCACACACGAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGTGTCTACTTGTGCTTaGTGGACTTTTCATGATGGC +
Preference number: 5 (lower is better)
Translates to: MCTHECVLKSLIVRLDNAVSTCA*WTFHDG
Trigger: GCCATCATGAAAAGTCCACAAAGCACAAGTAGACAC...AGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTCGTGTGTGCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp AAGTGCCAATTAAGTAGGATGAATTTATGTGGGAGGGTGAACACCTGCTCAAGCTTGGCAGGTCAGTGGTaGAAGCAGGATTCCAAAGTA +
Preference number: 5 (lower is better)
Translates to: KCQLSRMNLCGRVNTCSSLAGQW*KQDSKV
Trigger: TACTTTGGAATCCTGCTTCAACCACTGACCTGCCAA...GCTTGAGCAGGTGTTCACCCTCCCACATAAATTCATCCTACTTAATTGGCACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp CTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTTACATATTGCCAAGGCAAATaGGCAGGTCAGTGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: LSAFPTQGQIRVTTSILTYCQGK*AGQWLK
Trigger: CTTCAACCACTGACCTGCCAATTTGCCTTGGCAATA...TGTAAGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATATACTCATCCTCTTTTaGCCCAACCCGGTAAACTAC +
Preference number: 5 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDILILF*PNPVNY
Trigger: GTAGTTTACCGGGTTGGGCAAAAAGAGGATGAGTAT...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp GGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTTGCTTAGTGAAACCTTaGTTTCCAAGCAGAGTGAAC +
Preference number: 5 (lower is better)
Translates to: GAFSISHTGSNQGNYLHSCLVKP*FPSRVN
Trigger: GTTCACTCTGCTTGGAAACAAAGGTTTCACTAAGCA...AGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp ATGTGCACACACGAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGAGGTTGTGGATCAGTaGCACATTAGTGACATCCAT +
Preference number: 5 (lower is better)
Translates to: MCTHECVLKSLIVRLDNAEVVDQ*HISDIH
Trigger: ATGGATGTCACTAATGTGCAACTGATCCACAACCTC...AGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTCGTGTGTGCACAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp GGTGCTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTCATTGTTGTGTCCTCTaGGAAGAGAAACATTCTTCC +
Preference number: 5 (lower is better)
Translates to: GAFSISHTGSNQGNYLHSHCCVL*EEKHSS
Trigger: GGAAGAATGTTTCTCTTCCAAGAGGACACAACAATG...AGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAGCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATCCAAATTGCATCCCATaGATGGCACCAGAAGATTTC +
Preference number: 5 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDPNCIP*MAPEDF
Trigger: GAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS TCA 90 bp TCAAACAGCCAGGAGAGAATTACACACTGCTCAGGAGATAGCTTCTaGAACTGCGAGACGTTAAAAAGCCATATTCAAATCACGGGGTTG +
Preference number: 5 (lower is better)
Translates to: SNSQERITHCSGDSF*NCETLKSHIQITGL
Trigger: CAACCCCGTGATTTGAATATGGCTTTTTAACGTCTCGCAGTTTCAGAAGCTATCTCCTGAGCAGTGTGTAATTCTCTCCTGGCTGTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553627.1
CDS-3UTR CAA 90 bp GGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAATCTTATCAGCCTGTGTaGCCCTCTTTGCTGCTGTCC +
Preference number: 5 (lower is better)
Translates to: GIYSDSFNSKVVDVYPKESYQPV*PSLLLS
Trigger: GGACAGCAGCAAAGAGGGCAACACAGGCTGATAAGA...TTCCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp TTGCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTAGAACTCTGACATTCTaGGGAAGGTTCATGGGGAAT +
Preference number: 5 (lower is better)
Translates to: LPWHWVLIVQPCTVLQQLRTLTF*GRFMGN
Trigger: ATTCCCCATGAACCTTCCCAAGAATGTCAGAGTTCT...AAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp TCAGCTGACATAACAGAACCACTGATCAGTTGTTTTTGTCTAAATAGCAGGAAGAACCAGGCTCAGGTGTaGCTTCTCACCGCTGACTAT +
Preference number: 5 (lower is better)
Translates to: SADITEPLISCFCLNSRKNQAQV*LLTADY
Trigger: ATAGTCAGCGGTGAGAAGCAACACCTGAGCCTGGTT...CTTCCTGCTATTTAGACAAAAACAACTGATCAGTGGTTCTGTTATGTCAGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp TTGCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTCTCGTTCTTTTTGCCTaGGCATTGGGTTCTCATTGT +
Preference number: 5 (lower is better)
Translates to: LPWHWVLIVQPCTVLQQLLVLFA*ALGSHC
Trigger: ACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAG...AAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp GCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTCTCATCTCAATTTTCTaGATTCTGTCAGGCCGGGTT +
Preference number: 5 (lower is better)
Translates to: ALALGSHCTTLYSTSATFLISIF*ILSGRV
Trigger: AACCCGGCCTGACAGAATCAAGAAAATTGAGATGAG...AAAAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATGCACAGTTTCAATTCTaGTGTCTACGACATACAGCT +
Preference number: 5 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDAQFQF*CLRHTA
Trigger: AGCTGTATGTCGTAGACACAAGAATTGAAACTGTGC...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTGGAACCTCTTCATCCTaGTTCTTCCTGGCCCAAAGT +
Preference number: 5 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVGTSSS*FFLAQS
Trigger: ACTTTGGGCCAGGAAGAACAAGGATGAAGAGGTTCC...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATGGGTACAGACATATCTaGATTCCATCTGAAACCTTC +
Preference number: 5 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDGYRHI*IPSETF
Trigger: GAAGGTTTCAGATGGAATCAAGATATGTCTGTACCC...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAAAAAGGCCTGCCATGGTaGTGTGTTATCCCATGGCAC +
Preference number: 5 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKKGLPW*CVIPWH
Trigger: GTGCCATGGGATAACACACAACCATGGCAGGCCTTT...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp AAGTGCCAATTAAGTAGGATGAATTTATGTGGGAGGGTGAACACCTGCTCAAGCAGTCATCAGGAAGTGTaGCCTGGAGAAAAAGACAGA +
Preference number: 5 (lower is better)
Translates to: KCQLSRMNLCGRVNTCSSSHQEV*PGEKDR
Trigger: TCTGTCTTTTTCTCCAGGCAACACTTCCTGATGACT...GCTTGAGCAGGTGTTCACCCTCCCACATAAATTCATCCTACTTAATTGGCACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp ACGAGCTCTAACTCTAGACTTGGAGGCAGTGAGGTGATCAGAACAAGCTATTTTCAAAGACCTGCTCACTaGGAAGTTTCCTCTTCTCTA +
Preference number: 5 (lower is better)
Translates to: TSSNSRLGGSEVIRTSYFQRPAH*EVSSSL
Trigger: TAGAGAAGAGGAAACTTCCAAGTGAGCAGGTCTTTG...AAAATAGCTTGTTCTGATCACCTCACTGCCTCCAAGTCTAGAGTTAGAGCTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAATTAGAGTTGGCATCCTaGGTGGAGTCCTATGGGCAG +
Preference number: 5 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKLELAS*VESYGQ
Trigger: CTGCCCATAGGACTCCACCAAGGATGCCAACTCTAA...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTCCATTATCCCAGCCATaGCATATCAGCTGCCTTGAG +
Preference number: 5 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVPLSQP*HISCLE
Trigger: CTCAAGGCAGCTGATATGCAATGGCTGGGATAATGG...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp TTCGATTATCTTTTACTCCTGTCAAGATTTTGTCAACTTAACGAGAAGGCATGCTCTTATCAGCCTGTGTaGCCCTCTTTGCTGCTGTCC +
Preference number: 5 (lower is better)
Translates to: FDYLLLLSRFCQLNEKACSYQPV*PSLLLS
Trigger: GGACAGCAGCAAAGAGGGCAACACAGGCTGATAAGA...GCATGCCTTCTCGTTAAGTTGACAAAATCTTGACAGGAGTAAAAGATAATCGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGCTGGATGGGGTTCTGTaGAAGTCCAGAACTCCAGCT +
Preference number: 5 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHELDGVL*KSRTPA
Trigger: AGCTGGAGTTCTGGACTTCAACAGAACCCCATCCAG...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp TTGCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTACAATTGAAAATTCCTaGAGCTTGGTGAGATGGCTG +
Preference number: 5 (lower is better)
Translates to: LPWHWVLIVQPCTVLQQLTIENS*SLVRWL
Trigger: CAGCCATCTCACCAAGCTCAAGGAATTTTCAATTGT...AAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp GCAAAGTGGTTGATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCCAGCTTACGCAGATTaGAGAAGGCTGTCAAAGGAA +
Preference number: 5 (lower is better)
Translates to: AKWLMCILRKNHSFFLPWPAYAD*RRLSKE
Trigger: TTCCTTTGACAGCCTTCTCAAATCTGCGTAAGCTGG...CCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACATCAACCACTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp TGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTATCCGCAGTTGGTTGTaGGATATATCCAGCCGTTCC +
Preference number: 5 (lower is better)
Translates to: CILRKNHSFFLPWHWVLIIRSWL*DISSRS
Trigger: GGAACGGCTGGATATATCCAACAACCAACTGCGGAT...AATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp ATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTGTAAGCATCCGCAGTTGGTaGTTGGATATATCCAGCCGT +
Preference number: 5 (lower is better)
Translates to: ILRKNHSFFLPWHWVLIVSIRSW*LDISSR
Trigger: ACGGCTGGATATATCCAACAACCAACTGCGGATGCT...TACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp GGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAACAGTATCGCATGTTGTaGGGGATATGGCAGTCTGTG +
Preference number: 5 (lower is better)
Translates to: GIYSDSFNSKVVDVYPKEQYRML*GIWQSV
Trigger: CACAGACTGCCATATCCCCAACAACATGCGATACTG...TTCCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp CAGGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGTTGCAGTATCGCATGTaGTTGGGGATATGGCAGTCT +
Preference number: 5 (lower is better)
Translates to: QEFILTASTAKWLMCILRLQYRM*LGIWQS
Trigger: AGACTGCCATATCCCCAACAACATGCGATACTGCAA...CCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp GCAAAGTGGTTGATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGGGCATTGGGTTCTCATaGTACAACCCTGTACAGTAC +
Preference number: 5 (lower is better)
Translates to: AKWLMCILRKNHSFFLPWGIGFS*YNPVQY
Trigger: GTACTGTACAGGGTTGTACAATGAGAACCCAATGCC...CCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACATCAACCACTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp ACGAGCTCTAACTCTAGACTTGGAGGCAGTGAGGTGATCAGAACAAGCTATTTTCCTGCTAACATAAGATaGATTAGCCCTCCACAATTG +
Preference number: 5 (lower is better)
Translates to: TSSNSRLGGSEVIRTSYFPANIR*ISPPQL
Trigger: CAATTGTGGAGGGCTAATCAATCTTATGTTAGCAGG...AAAATAGCTTGTTCTGATCACCTCACTGCCTCCAAGTCTAGAGTTAGAGCTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp ACGAGCTCTAACTCTAGACTTGGAGGCAGTGAGGTGATCAGAACAAGCTATTTTAATCCCCAGGGACAGTaGTTTGGCAATTTTCATAAG +
Preference number: 5 (lower is better)
Translates to: TSSNSRLGGSEVIRTSYFNPQGQ*FGNFHK
Trigger: CTTATGAAAATTGCCAAACAACTGTCCCTGGGGATT...AAAATAGCTTGTTCTGATCACCTCACTGCCTCCAAGTCTAGAGTTAGAGCTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp AAGTGCCAATTAAGTAGGATGAATTTATGTGGGAGGGTGAACACCTGCTCAAGCGAAGATTTGCCTGATTaGGCTAAGAACGCATTTCAC +
Preference number: 5 (lower is better)
Translates to: KCQLSRMNLCGRVNTCSSEDLPD*AKNAFH
Trigger: GTGAAATGCGTTCTTAGCCAAATCAGGCAAATCTTC...GCTTGAGCAGGTGTTCACCCTCCCACATAAATTCATCCTACTTAATTGGCACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp ATGTGCACACACGAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTCACATATATAGTGGTTaGAAGGAACTTGAGATCCCA +
Preference number: 5 (lower is better)
Translates to: MCTHECVLKSLIVRLDNAHIYSG*KELEIP
Trigger: TGGGATCTCAAGTTCCTTCAAACCACTATATATGTG...AGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTCGTGTGTGCACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATTTGGAAGAGAGGTCTTaGACTTGTATCTTAAAGGAC +
Preference number: 5 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDLEERS*TCILKD
Trigger: GTCCTTTAAGATACAAGTCAAAGACCTCTCTTCCAA...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp GCAAAGTGGTTGATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGACAGGTGGTAGACTATaGCACCTGCATTGTAGAGAC +
Preference number: 5 (lower is better)
Translates to: AKWLMCILRKNHSFFLPWTGGRL*HLHCRD
Trigger: GTCTCTACAATGCAGGTGCAATAGTCTACCACCTGT...CCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACATCAACCACTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp ATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTGTACAGACTGGGGGAAATTaGCTGTCATTGCAGGAGCAT +
Preference number: 5 (lower is better)
Translates to: ILRKNHSFFLPWHWVLIVQTGGN*LSLQEH
Trigger: ATGCTCCTGCAATGACAGCAAATTTCCCCCAGTCTG...TACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp AAGTGCCAATTAAGTAGGATGAATTTATGTGGGAGGGTGAACACCTGCTCAAGCTCTATCCACACTCAGTaGTCCTTTATCCCATTCTCT +
Preference number: 5 (lower is better)
Translates to: KCQLSRMNLCGRVNTCSSSIHTQ*SFIPFS
Trigger: AGAGAATGGGATAAAGGACAACTGAGTGTGGATAGA...GCTTGAGCAGGTGTTCACCCTCCCACATAAATTCATCCTACTTAATTGGCACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp TCCAAACAGAATAGAGATTGGCAGCAGACCACAGGAATGCCAGTACCCATTGATAAAGTTCAGTACTGGTaGATCAAAATAGGTTTGCGG +
Preference number: 5 (lower is better)
Translates to: SKQNRDWQQTTGMPVPIDKVQYW*IKIGLR
Trigger: CCGCAAACCTATTTTGATCAACCAGTACTGAACTTT...ATCAATGGGTACTGGCATTCCTGTGGTCTGCTGCCAATCTCTATTCTGTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp ATGTGCACACACGAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTGATCATGAGAAAACCTaGTTACAGAATAGAGACTGC +
Preference number: 5 (lower is better)
Translates to: MCTHECVLKSLIVRLDNADHEKT*LQNRDC
Trigger: GCAGTCTCTATTCTGTAACAAGGTTTTCTCATGATC...AGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTCGTGTGTGCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp GGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAACTCCCTTTGAGTCTGTaGCCATACATAGTCCGCAGA +
Preference number: 5 (lower is better)
Translates to: GIYSDSFNSKVVDVYPKELPLSL*PYIVRR
Trigger: TCTGCGGACTATGTATGGCAACAGACTCAAAGGGAG...TTCCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp AAAATATGCCTAACATTCATAACATGCTATATATACATGGGGTACCTCAGGCACAGATCTGCAGGCAACTaGATCTTGGGCTTCACAGCC +
Preference number: 5 (lower is better)
Translates to: KICLTFITCYIYMGYLRHRSAGN*ILGFTA
Trigger: GGCTGTGAAGCCCAAGATCAAGTTGCCTGCAGATCT...GTGCCTGAGGTACCCCATGTATATATAGCATGTTATGAATGTTAGGCATATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp ACGAGCTCTAACTCTAGACTTGGAGGCAGTGAGGTGATCAGAACAAGCTATTTTACTAAATGTTGTCGTTaGTTCTCTGTCACTCCAGGA +
Preference number: 5 (lower is better)
Translates to: TSSNSRLGGSEVIRTSYFTKCCR*FSVTPG
Trigger: TCCTGGAGTGACAGAGAACAAACGACAACATTTAGT...AAAATAGCTTGTTCTGATCACCTCACTGCCTCCAAGTCTAGAGTTAGAGCTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp TTGCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTCTGCCACTAAATAGATaGCTGAACCTCCTAGTGAAT +
Preference number: 5 (lower is better)
Translates to: LPWHWVLIVQPCTVLQQLLPLNR*LNLLVN
Trigger: ATTCACTAGGAGGTTCAGCAATCTATTTAGTGGCAG...AAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp GCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTCTTCAGCATCTTAATTaGGTCTGTGAGCTTCTCTGT +
Preference number: 5 (lower is better)
Translates to: ALALGSHCTTLYSTSATFLQHLN*VCELLC
Trigger: ACAGAGAAGCTCACAGACCAAATTAAGATGCTGAAG...AAAAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp GGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAAGAGAAGGAGGTTGCATaGAGCCAAGATTGTGCCACT +
Preference number: 5 (lower is better)
Translates to: GIYSDSFNSKVVDVYPKEEKEVA*SQDCAT
Trigger: AGTGGCACAATCTTGGCTCAATGCAACCTCCTTCTC...TTCCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp GCATGTATGTGTCACTGTGTCTCTTGGACAGAGTATGTTGGTCCCAGGCAACTTAGTTCAAATGAATCATaGTTGTGTCCTCTTGGAAGA +
Preference number: 5 (lower is better)
Translates to: ACMCHCVSWTEYVGPRQLSSNES*LCPLGR
Trigger: TCTTCCAAGAGGACACAACAATGATTCATTTGAACT...AAGTTGCCTGGGACCAACATACTCTGTCCAAGAGACACAGTGACACATACATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS TCA 90 bp TTGAAGAACATGATGCAATCATGTGACGACATTCTTTCCCGTTATTaGACCGTGTGGCCTGAATACTGCCCTAAAGGACAGGAAAGAATT +
Preference number: 5 (lower is better)
Translates to: LKNMMQSCDDILSRY*TVWPEYCPKGQERI
Trigger: AATTCTTTCCTGTCCTTTAGGGCAGTATTCAGGCCACACGGTTCAATAACGGGAAAGAATGTCGTCACATGATTGCATCATGTTCTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557419.5
ENST00000684438.1
CDS-3UTR CAA 90 bp TCAGCTGACATAACAGAACCACTGATCAGTTGTTTTTGTCTAAATAGCAGGAAGTGCACCGACTGTACATaGTGCAGTTCTGCAGGAAAT +
Preference number: 5 (lower is better)
Translates to: SADITEPLISCFCLNSRKCTDCT*CSSAGN
Trigger: ATTTCCTGCAGAACTGCACAATGTACAGTCGGTGCA...CTTCCTGCTATTTAGACAAAAACAACTGATCAGTGGTTCTGTTATGTCAGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp ATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCGTGAGCTGCTTCAGGTaGGAGAGATTATCAAAAACC +
Preference number: 5 (lower is better)
Translates to: MCILRKNHSFFLPWHWVLVSCFR*ERLSKT
Trigger: GGTTTTTGATAATCTCTCCAACCTGAAGCAGCTCAC...GAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp TGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTTTCACCCATGTGAGTTaGTATGCCATCACGGTGAAG +
Preference number: 5 (lower is better)
Translates to: CILRKNHSFFLPWHWVLIFTHVS*YAITVK
Trigger: CTTCACCGTGATGGCATACAAACTCACATGGGTGAA...AATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGCAGTATCGCATGTTGTaGGGGATATGGCAGTCTGTG +
Preference number: 5 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHEQYRML*GIWQSV
Trigger: CACAGACTGCCATATCCCCAACAACATGCGATACTG...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp GCAAAGTGGTTGATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCTTTTTGCCTTGGCATaGGGTTCTCATTGTACAACC +
Preference number: 5 (lower is better)
Translates to: AKWLMCILRKNHSFFLPWLFALA*GSHCTT
Trigger: GGTTGTACAATGAGAACCCAATGCCAAGGCAAAAAG...CCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACATCAACCACTTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTAATCACTCGTTCTTTTaGCCTTGGCATTGGGTTCTC +
Preference number: 5 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVNHSFF*PWHWVL
Trigger: GAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATT...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTTACGTAATGGATATCTaGTGCAGCCAAGACTGGCAT +
Preference number: 5 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVYVMDI*CSQDWH
Trigger: ATGCCAGTCTTGGCTGCACAAGATATCCATTACGTA...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp ATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTGTAGCATCAAGCTCTTTATaGGCCAGTGAGCATGGCTTT +
Preference number: 5 (lower is better)
Translates to: ILRKNHSFFLPWHWVLIVASSSL*ASEHGF
Trigger: AAAGCCATGCTCACTGGCCAATAAAGAGCTTGATGC...TACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp GCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTGAAGGAAGTTCTGATTaGTGTGAAATGACTAAGACC +
Preference number: 5 (lower is better)
Translates to: ALALGSHCTTLYSTSATFEGSSD*CEMTKT
Trigger: GGTCTTAGTCATTTCACACAAATCAGAACTTCCTTC...AAAAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp GGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAACTGTGGACTGCAATATaGCCTCGTGTTCTGAATGGA +
Preference number: 5 (lower is better)
Translates to: GIYSDSFNSKVVDVYPKELWTAI*PRVLNG
Trigger: TCCATTCAGAACACGAGGCAATATTGCAGTCCACAG...TTCCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp ATGTGCACACACGAGTGTGTTCTCAAGAGTCTAATTGTCCGCCTTGATAACGCTAGACCAAGAACTGTTTaGTTCTGTGTGAGTATCTTT +
Preference number: 5 (lower is better)
Translates to: MCTHECVLKSLIVRLDNARPRTV*FCVSIF
Trigger: AAAGATACTCACACAGAACAAAACAGTTCTTGGTCT...AGCGTTATCAAGGCGGACAATTAGACTCTTGAGAACACACTCGTGTGTGCACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp GCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTCATTATTCCTTTAGATaGAGTTCCATCGTGGTGCTT +
Preference number: 5 (lower is better)
Translates to: ALALGSHCTTLYSTSATFHYSFR*SSIVVL
Trigger: AAGCACCACGATGGAACTCAATCTAAAGGAATAATG...AAAAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp AAAATATGCCTAACATTCATAACATGCTATATATACATGGGGTACCTCAGGCACCCTAAGATCAGGAGTTaGAGACCAGCCTGGCCATAT +
Preference number: 5 (lower is better)
Translates to: KICLTFITCYIYMGYLRHPKIRS*RPAWPY
Trigger: ATATGGCCAGGCTGGTCTCAAACTCCTGATCTTAGG...GTGCCTGAGGTACCCCATGTATATATAGCATGTTATGAATGTTAGGCATATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp TTCGATTATCTTTTACTCCTGTCAAGATTTTGTCAACTTAACGAGAAGGCATGCGAGGAGAAAACACATTaGAGAGGCCACTCTGGTGCT +
Preference number: 5 (lower is better)
Translates to: FDYLLLLSRFCQLNEKACEEKTH*RGHSGA
Trigger: AGCACCAGAGTGGCCTCTCAAATGTGTTTTCTCCTC...GCATGCCTTCTCGTTAAGTTGACAAAATCTTGACAGGAGTAAAAGATAATCGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp ATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCCTAAAGTGCAAGTTATaGCCAAGGCAAATTGGCAGG +
Preference number: 5 (lower is better)
Translates to: MCILRKNHSFFLPWHWVLLKCKL*PRQIGR
Trigger: CCTGCCAATTTGCCTTGGCAATAACTTGCACTTTAG...GAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp CTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTTACATCTGACAGACCCATCTaGATAATAGCTGTGCAAATT +
Preference number: 5 (lower is better)
Translates to: LSAFPTQGQIRVTTSILTSDRPI*IIAVQI
Trigger: AATTTGCACAGCTATTATCAAGATGGGTCTGTCAGA...TGTAAGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTCTTCCTACCCCAATATaGATCAGTCATCAGGAAGTG +
Preference number: 5 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVLPTPI*ISHQEV
Trigger: CACTTCCTGATGACTGATCAATATTGGGGTAGGAAG...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp TCAGCTGACATAACAGAACCACTGATCAGTTGTTTTTGTCTAAATAGCAGGAAGATACAAGAGGCTTACTaGGGAGGGTTTTTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: SADITEPLISCFCLNSRKIQEAY*GGFLQL
Trigger: CAGCTGCAAAAACCCTCCCAAGTAAGCCTCTTGTAT...CTTCCTGCTATTTAGACAAAAACAACTGATCAGTGGTTCTGTTATGTCAGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp GCAAAGTGGTTGATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGATAACGGGTCTATTGTaGGAGGAATTCAAGACAGCC +
Preference number: 5 (lower is better)
Translates to: AKWLMCILRKNHSFFLPWITGLL*EEFKTA
Trigger: GGCTGTCTTGAATTCCTCCAACAATAGACCCGTTAT...CCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACATCAACCACTTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp GCAAAGTGGTTGATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGGATGTAGTCAGCAGTTaGGAAGGATCATTACTCCAC +
Preference number: 5 (lower is better)
Translates to: AKWLMCILRKNHSFFLPWDVVSS*EGSLLH
Trigger: GTGGAGTAATGATCCTTCCAAACTGCTGACTACATC...CCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACATCAACCACTTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp AAAATATGCCTAACATTCATAACATGCTATATATACATGGGGTACCTCAGGCACTCTGTGTCTCCTAATTaGCTTCTGGCTCCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: KICLTFITCYIYMGYLRHSVSPN*LLAPRR
Trigger: CCTTCTGGGAGCCAGAAGCAAATTAGGAGACACAGA...GTGCCTGAGGTACCCCATGTATATATAGCATGTTATGAATGTTAGGCATATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp TTGCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTTCTAATGATGTGTTaGCCACACTATGTGGCCTAT +
Preference number: 5 (lower is better)
Translates to: LPWHWVLIVQPCTVLQQLFLMMC*PHYVAY
Trigger: ATAGGCCACATAGTGTGGCAAACACATCATTAGAAA...AAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp TTCGATTATCTTTTACTCCTGTCAAGATTTTGTCAACTTAACGAGAAGGCATGCTACAGTTTAAGCAACTaGCCCAAGGTCACGGGGAAG +
Preference number: 5 (lower is better)
Translates to: FDYLLLLSRFCQLNEKACYSLSN*PKVTGK
Trigger: CTTCCCCGTGACCTTGGGCAAGTTGCTTAAACTGTA...GCATGCCTTCTCGTTAAGTTGACAAAATCTTGACAGGAGTAAAAGATAATCGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp ACGAGCTCTAACTCTAGACTTGGAGGCAGTGAGGTGATCAGAACAAGCTATTTTTCTCTTCTTCAGTCTTaGGAGGCTGTTAGGTTTTTA +
Preference number: 5 (lower is better)
Translates to: TSSNSRLGGSEVIRTSYFSLLQS*EAVRFL
Trigger: TAAAAACCTAACAGCCTCCAAAGACTGAAGAAGAGA...AAAATAGCTTGTTCTGATCACCTCACTGCCTCCAAGTCTAGAGTTAGAGCTCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp ATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTGTACTGGTGTACCTCCCTTaGAGTCTGTTGCCATACATA +
Preference number: 5 (lower is better)
Translates to: ILRKNHSFFLPWHWVLIVLVYLP*SLLPYI
Trigger: TATGTATGGCAACAGACTCAAAGGGAGGTACACCAG...TACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp ATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTGTAAACAGGGAGCACATTTaGTGGGCAGCATCTACACTT +
Preference number: 5 (lower is better)
Translates to: ILRKNHSFFLPWHWVLIVNREHI*WAASTL
Trigger: AAGTGTAGATGCTGCCCACAAAATGTGCTCCCTGTT...TACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp AAGTGCCAATTAAGTAGGATGAATTTATGTGGGAGGGTGAACACCTGCTCAAGCGCATCTTTCCTTCATTaGCACAATTCAGGTACAACT +
Preference number: 5 (lower is better)
Translates to: KCQLSRMNLCGRVNTCSSASFLH*HNSGTT
Trigger: AGTTGTACCTGAATTGTGCAAATGAAGGAAAGATGC...GCTTGAGCAGGTGTTCACCCTCCCACATAAATTCATCCTACTTAATTGGCACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp ATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCACAGGCCCAGTTTCTTaGGAAAGGATTTCCAGACAT +
Preference number: 5 (lower is better)
Translates to: MCILRKNHSFFLPWHWVLTGPVS*ERISRH
Trigger: ATGTCTGGAAATCCTTTCCAAAGAAACTGGGCCTGT...GAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp AAGTGCCAATTAAGTAGGATGAATTTATGTGGGAGGGTGAACACCTGCTCAAGCTTAGTGACATCCATCTaGAGCAGATATGCACTTTGT +
Preference number: 5 (lower is better)
Translates to: KCQLSRMNLCGRVNTCSSLVTSI*SRYALC
Trigger: ACAAAGTGCATATCTGCTCAAGATGGATGTCACTAA...GCTTGAGCAGGTGTTCACCCTCCCACATAAATTCATCCTACTTAATTGGCACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp TGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTCCTCCTAAGGAGACTTaGTTGTTCCTTGCTCATTGC +
Preference number: 5 (lower is better)
Translates to: CILRKNHSFFLPWHWVLIPPKET*LFLAHC
Trigger: GCAATGAGCAAGGAACAACAAAGTCTCCTTAGGAGG...AATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS TCA 90 bp TTGAGATCAGTGCTATTACAATTCTCATCGTCCAGATGTAGGAGCTaGTTTGCAGAGGATGCGAAGCTGCACAGTTTAAGAACTATTACA +
Preference number: 5 (lower is better)
Translates to: LRSVLLQFSSSRCRS*FAEDAKLHSLRTIT
Trigger: TGTAATAGTTCTTAAACTGTGCAGCTTCGCATCCTCTGCAAATCAGCTCCTACATCTGGACGATGAGAATTGTAATAGCACTGATCTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684438.1
CDS GCA 90 bp TACATAGTCACTGGCCAAATCAATTCGTGGGTTATGAGAAAACAATaGCATTTGGCTGAAATATTCCCTATGTACAGGCAGAGAAGAGCA +
Preference number: 5 (lower is better)
Translates to: YIVTGQINSWVMRKQ*HLAEIFPMYRQRRA
Trigger: TGCTCTTCTCTGCCTGTACATAGGGAATATTTCAGCCAAATGGCATTGTTTTCTCATAACCCACGAATTGATTTGGCCAGTGACTATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684438.1
CDS-3UTR CAA 90 bp TGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTAGAACTCTGACATTCTaGGGAAGGTTCATGGGGAAT +
Preference number: 5 (lower is better)
Translates to: CILRKNHSFFLPWHWVLIRTLTF*GRFMGN
Trigger: ATTCCCCATGAACCTTCCCAAGAATGTCAGAGTTCT...AATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGGAAAATTCCTTGAGCTaGGTGAGATGGCTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHEENSLS*VRWLKV
Trigger: CACCTTCAGCCATCTCACCAAGCTCAAGGAATTTTC...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGAGTCAGCATCCGCAGTaGGTTGTTGGATATATCCAG +
Preference number: 5 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHESQHPQ*VVGYIQ
Trigger: CTGGATATATCCAACAACCAACTGCGGATGCTGACT...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp CAGGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGGATGAAGGGATATATTaGAGCCATTCTGTGACCCAT +
Preference number: 5 (lower is better)
Translates to: QEFILTASTAKWLMCILRDEGIY*SHSVTH
Trigger: ATGGGTCACAGAATGGCTCAAATATATCCCTTCATC...CCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp TGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTATGAAACCCCGCACGTaGAGAGATGAAGGGATATAT +
Preference number: 5 (lower is better)
Translates to: CILRKNHSFFLPWHWVLIMKPRT*RDEGIY
Trigger: ATATATCCCTTCATCTCTCAACGTGCGGGGTTTCAT...AATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp TTCGATTATCTTTTACTCCTGTCAAGATTTTGTCAACTTAACGAGAAGGCATGCTTCACCCATGTGAGTTaGTATGCCATCACGGTGAAG +
Preference number: 5 (lower is better)
Translates to: FDYLLLLSRFCQLNEKACFTHVS*YAITVK
Trigger: CTTCACCGTGATGGCATACAAACTCACATGGGTGAA...GCATGCCTTCTCGTTAAGTTGACAAAATCTTGACAGGAGTAAAAGATAATCGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGGGCATTGGGTTCTCATaGTACAACCCTGTACAGTAC +
Preference number: 5 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHEGIGFS*YNPVQY
Trigger: GTACTGTACAGGGTTGTACAATGAGAACCCAATGCC...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp TGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTCTCGTTCTTTTTGCCTaGGCATTGGGTTCTCATTGT +
Preference number: 5 (lower is better)
Translates to: CILRKNHSFFLPWHWVLILVLFA*ALGSHC
Trigger: ACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAG...AATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp CTTTCAGCATTTCCCACACAGGGTCAAATCAGGGTAACTACCTCCATTCTTACAGATTATGATTACCCTTaGTCCTTCAATGTGTTGGAA +
Preference number: 5 (lower is better)
Translates to: LSAFPTQGQIRVTTSILTDYDYP*SFNVLE
Trigger: TTCCAACACATTGAAGGACAAAGGGTAATCATAATC...TGTAAGAATGGAGGTAGTTACCCTGATTTGACCCTGTGTGGGAAATGCTGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp ATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCAAAATGTTCTTCCATTaGACTGCTACCATCCCCACT +
Preference number: 5 (lower is better)
Translates to: MCILRKNHSFFLPWHWVLKMFFH*TATIPT
Trigger: AGTGGGGATGGTAGCAGTCAAATGGAAGAACATTTT...GAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp AAGTGCCAATTAAGTAGGATGAATTTATGTGGGAGGGTGAACACCTGCTCAAGCGTACAGATGAGAAAATaGAAGCATATACATGCCCAA +
Preference number: 5 (lower is better)
Translates to: KCQLSRMNLCGRVNTCSSVQMRK*KHIHAQ
Trigger: TTGGGCATGTATATGCTTCAATTTTCTCATCTGTAC...GCTTGAGCAGGTGTTCACCCTCCCACATAAATTCATCCTACTTAATTGGCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp AAAATATGCCTAACATTCATAACATGCTATATATACATGGGGTACCTCAGGCACTCTGAAGCAATCACATaGGTCACCAAAGCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: KICLTFITCYIYMGYLRHSEAIT*VTKALA
Trigger: AGCCAAGGCTTTGGTGACCAATGTGATTGCTTCAGA...GTGCCTGAGGTACCCCATGTATATATAGCATGTTATGAATGTTAGGCATATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp TTGCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTACATTTTATGCACCGTaGAATTTGCTGGATCATTGT +
Preference number: 5 (lower is better)
Translates to: LPWHWVLIVQPCTVLQQLTFYAP*NLLDHC
Trigger: ACAATGATCCAGCAAATTCAACGGTGCATAAAATGT...AAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp GCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTCTTAGGTACTCAGTATaGACTCTACCAAATGAACTA +
Preference number: 5 (lower is better)
Translates to: ALALGSHCTTLYSTSATFLRYSV*TLPNEL
Trigger: TAGTTCATTTGGTAGAGTCAATACTGAGTACCTAAG...AAAAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp GCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTACACACATATCCATCTaGGTTCCTGATTATCTTCTT +
Preference number: 5 (lower is better)
Translates to: ALALGSHCTTLYSTSATFTHISI*VPDYLL
Trigger: AAGAAGATAATCAGGAACCAAGATGGATATGTGTGT...AAAAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp GCCTTGGCATTGGGTTCTCATTGTACAACCCTGTACAGTACTTCAGCAACTTTTTTTCCTAGTGTTGTTTaGAGTCCCATGTTTTACACA +
Preference number: 5 (lower is better)
Translates to: ALALGSHCTTLYSTSATFFPSVV*SPMFYT
Trigger: TGTGTAAAACATGGGACTCAAAACAACACTAGGAAA...AAAAGTTGCTGAAGTACTGTACAGGGTTGTACAATGAGAACCCAATGCCAAGGC
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp ACGAGCTCTAACTCTAGACTTGGAGGCAGTGAGGTGATCAGAACAAGCTATTTTGTGACTCAAAATATCTaGAGCCTATCTATGTACAAG +
Preference number: 5 (lower is better)
Translates to: TSSNSRLGGSEVIRTSYFVTQNI*SLSMYK
Trigger: CTTGTACATAGATAGGCTCAAGATATTTTGAGTCAC...AAAATAGCTTGTTCTGATCACCTCACTGCCTCCAAGTCTAGAGTTAGAGCTCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp TGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTCCTAGCAAAGCTATTTaGTGGGCAGGGTTACAACTT +
Preference number: 5 (lower is better)
Translates to: CILRKNHSFFLPWHWVLIPSKAI*WAGLQL
Trigger: AAGTTGTAACCCTGCCCACAAAATAGCTTTGCTAGG...AATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp GGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAAACAATTGAAAATTCCTaGAGCTTGGTGAGATGGCTG +
Preference number: 5 (lower is better)
Translates to: GIYSDSFNSKVVDVYPKETIENS*SLVRWL
Trigger: CAGCCATCTCACCAAGCTCAAGGAATTTTCAATTGT...TTCCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330753.6
ENST00000554746.1
CDS-3UTR CAA 90 bp TCAGCTGACATAACAGAACCACTGATCAGTTGTTTTTGTCTAAATAGCAGGAAGGATGAAGGGATATATTaGAGCCATTCTGTGACCCAT +
Preference number: 5 (lower is better)
Translates to: SADITEPLISCFCLNSRKDEGIY*SHSVTH
Trigger: ATGGGTCACAGAATGGCTCAAATATATCCCTTCATC...CTTCCTGCTATTTAGACAAAAACAACTGATCAGTGGTTCTGTTATGTCAGCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTCTATCGGGCCATTTCTaGTTTTACCCATATTATTCC +
Preference number: 5 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVLSGHF*FYPYYS
Trigger: GGAATAATATGGGTAAAACAAGAAATGGCCCGATAG...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp TCAGCTGACATAACAGAACCACTGATCAGTTGTTTTTGTCTAAATAGCAGGAAGCTGGTCACGTACTTTTaGTTTTTAACCTCAGGGAGA +
Preference number: 5 (lower is better)
Translates to: SADITEPLISCFCLNSRKLVTYF*FLTSGR
Trigger: TCTCCCTGAGGTTAAAAACAAAAAGTACGTGACCAG...CTTCCTGCTATTTAGACAAAAACAACTGATCAGTGGTTCTGTTATGTCAGCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp GCAAAGTGGTTGATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGATTTTTAAATGCCTGTaGCAATGGCCTTGCTTTGTG +
Preference number: 5 (lower is better)
Translates to: AKWLMCILRKNHSFFLPWIFKCL*QWPCFV
Trigger: CACAAAGCAAGGCCATTGCAACAGGCATTTAAAAAT...CCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACATCAACCACTTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp TTCGATTATCTTTTACTCCTGTCAAGATTTTGTCAACTTAACGAGAAGGCATGCAGTGAGGGAGAAGATTaGCCTGATTTGGCTAAGAAC +
Preference number: 5 (lower is better)
Translates to: FDYLLLLSRFCQLNEKACSEGED*PDLAKN
Trigger: GTTCTTAGCCAAATCAGGCAAATCTTCTCCCTCACT...GCATGCCTTCTCGTTAAGTTGACAAAATCTTGACAGGAGTAAAAGATAATCGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAAGGGAGTGACAGACGATaGTGGAAAGAAAGAATATTG +
Preference number: 5 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKGSDRR*WKERIL
Trigger: CAATATTCTTTCTTTCCACAATCGTCTGTCACTCCC...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp ATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCTTGATCAAAATAGGTTaGCGGACATGCAGCAAAATC +
Preference number: 5 (lower is better)
Translates to: MCILRKNHSFFLPWHWVLLIKIG*RTCSKI
Trigger: GATTTTGCTGCATGTCCGCAAACCTATTTTGATCAA...GAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp CCAAATTGCATCCCATTGATGGCACCAGAAGATTTCTCATCTAGAATGACAAAACATTGCTACCATCATTaGGGCTCACTAAAAAGTAGC +
Preference number: 5 (lower is better)
Translates to: PNCIPLMAPEDFSSRMTKHCYHH*GSLKSS
Trigger: GCTACTTTTTAGTGAGCCCAAATGATGGTAGCAATG...TTTTGTCATTCTAGATGAGAAATCTTCTGGTGCCATCAATGGGATGCAATTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTAGAAGCAGGTATGGGTaGAAGAAAAAGTGCCAATTA +
Preference number: 5 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVRSRYG*KKKCQL
Trigger: TAATTGGCACTTTTTCTTCAACCCATACCTGCTTCT...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp TCAGCTGACATAACAGAACCACTGATCAGTTGTTTTTGTCTAAATAGCAGGAAGGCCTCTGCCTCATTTTaGCCTTTCCAAATGTATAAG +
Preference number: 5 (lower is better)
Translates to: SADITEPLISCFCLNSRKASASF*PFQMYK
Trigger: CTTATACATTTGGAAAGGCAAAAATGAGGCAGAGGC...CTTCCTGCTATTTAGACAAAAACAACTGATCAGTGGTTCTGTTATGTCAGCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp CAGGAATTTATTCTGACAGCTTCAACAGCAAAGTGGTTGATGTGTATCCTAAGGAACACTCTCTCTCCTTaGAAACTGTTGATACAACTC +
Preference number: 5 (lower is better)
Translates to: QEFILTASTAKWLMCILRNTLSP*KLLIQL
Trigger: GAGTTGTATCAACAGTTTCAAAGGAGAGAGAGTGTT...CCTTAGGATACACATCAACCACTTTGCTGTTGAAGCTGTCAGAATAAATTCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS CCA 90 bp TTGAAGCCAATCCAAGCAATACATATTCGAGTAATACATAGTCACTaGCCAAATCAATTCGTGGGTTATGAGAAAACAATGCCATTTGGC +
Preference number: 5 (lower is better)
Translates to: LKPIQAIHIRVIHSH*PNQFVGYEKTMPFG
Trigger: GCCAAATGGCATTGTTTTCTCATAACCCACGAATTGATTTGGCCAGTGACTATGTATTACTCGAATATGTATTGCTTGGATTGGCTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684438.1
CDS-3UTR CAA 90 bp GCAAAGTGGTTGATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGTTATTTTGGCCAGCTTaGATGTGTCCTTACAGAATT +
Preference number: 5 (lower is better)
Translates to: AKWLMCILRKNHSFFLPWLFWPA*MCPYRI
Trigger: AATTCTGTAAGGACACATCAAAGCTGGCCAAAATAA...CCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACATCAACCACTTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp TGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTCCCCATGTCATTGTCTaGATTTTAGATGTCTTACTG +
Preference number: 5 (lower is better)
Translates to: CILRKNHSFFLPWHWVLIPHVIV*ILDVLL
Trigger: CAGTAAGACATCTAAAATCAAGACAATGACATGGGG...AATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp ATGTGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCGGCCTCGGTAAATATTaGCTGAATGAAATCAAAACT +
Preference number: 5 (lower is better)
Translates to: MCILRKNHSFFLPWHWVLGLGKY*LNEIKT
Trigger: AGTTTTGATTTCATTCAGCAAATATTTACCGAGGCC...GAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp AAAATATGCCTAACATTCATAACATGCTATATATACATGGGGTACCTCAGGCACTTCTGTTCAACCATGTaGTTCAATGATCCCACACAC +
Preference number: 5 (lower is better)
Translates to: KICLTFITCYIYMGYLRHFCSTM*FNDPTH
Trigger: GTGTGTGGGATCATTGAACAACATGGTTGAACAGAA...GTGCCTGAGGTACCCCATGTATATATAGCATGTTATGAATGTTAGGCATATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp AAAATATGCCTAACATTCATAACATGCTATATATACATGGGGTACCTCAGGCACGGAAATTTGCTGTCATaGCAGGAGCATGGAAAATCA +
Preference number: 5 (lower is better)
Translates to: KICLTFITCYIYMGYLRHGNLLS*QEHGKS
Trigger: TGATTTTCCATGCTCCTGCAATGACAGCAAATTTCC...GTGCCTGAGGTACCCCATGTATATATAGCATGTTATGAATGTTAGGCATATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp CACAGAATGAACTATGACATTCCCCAAGCCGAACAAATCGAAAAGTTCACAGTTATAATAACGGGTCTATaGTTGGAGGAATTCAAGACA +
Preference number: 5 (lower is better)
Translates to: HRMNYDIPQAEQIEKFTVIITGL*LEEFKT
Trigger: TGTCTTGAATTCCTCCAACAATAGACCCGTTATTAT...AACTGTGAACTTTTCGATTTGTTCGGCTTGGGGAATGTCATAGTTCATTCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp TGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTATAGAGTTGATAAACTaGGTTTCACTGGGCTTCGTT +
Preference number: 5 (lower is better)
Translates to: CILRKNHSFFLPWHWVLIIELIN*VSLGFV
Trigger: AACGAAGCCCAGTGAAACCAAGTTTATCAACTCTAT...AATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp AAAATATGCCTAACATTCATAACATGCTATATATACATGGGGTACCTCAGGCACGGGGTAATAGGCATATaGACAGGGAGAGTATCAAAA +
Preference number: 5 (lower is better)
Translates to: KICLTFITCYIYMGYLRHGVIGI*TGRVSK
Trigger: TTTTGATACTCTCCCTGTCAATATGCCTATTACCCC...GTGCCTGAGGTACCCCATGTATATATAGCATGTTATGAATGTTAGGCATATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGCCTAAGGAGACTTTGTaGTTCCTTGCTCATTGCTTT +
Preference number: 5 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHEPKETL*FLAHCF
Trigger: AAAGCAATGAGCAAGGAACAACAAAGTCTCCTTAGG...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS GCA 90 bp TATCACTCCTATGCAAAAACAATATATGACACTCCAGGCTGCATATaGTATTTGGGTCAGGAAGGCTTTCATTATCTTCGTTCAGAAAAT +
Preference number: 5 (lower is better)
Translates to: YHSYAKTIYDTPGCI*YLGQEGFHYLRSEN
Trigger: ATTTTCTGAACGAAGATAATGAAAGCCTTCCTGACCCAAATAGCATATGCAGCCTGGAGTGTCATATATTGTTTTTGCATAGGAGTGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684438.1
CDS-3UTR CAA 90 bp TGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTTCCCCTAAGGATATATaGAGGTTTTCGTCTAGTTTA +
Preference number: 5 (lower is better)
Translates to: CILRKNHSFFLPWHWVLISPKDI*RFSSSL
Trigger: TAAACTAGACGAAAACCTCAATATATCCTTAGGGGA...AATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp ATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTGTAAGTCACACAAAGAGTTaGAATTCTATCTTGCAAGCA +
Preference number: 5 (lower is better)
Translates to: ILRKNHSFFLPWHWVLIVSHTKS*NSILQA
Trigger: TGCTTGCAAGATAGAATTCAAACTCTTTGTGTGACT...TACAATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp TTCGATTATCTTTTACTCCTGTCAAGATTTTGTCAACTTAACGAGAAGGCATGCTGCAAAGAATTCATTTaGACTAGCCGACTGTCGAAA +
Preference number: 5 (lower is better)
Translates to: FDYLLLLSRFCQLNEKACCKEFI*TSRLSK
Trigger: TTTCGACAGTCGGCTAGTCAAAATGAATTCTTTGCA...GCATGCCTTCTCGTTAAGTTGACAAAATCTTGACAGGAGTAAAAGATAATCGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp TTCGATTATCTTTTACTCCTGTCAAGATTTTGTCAACTTAACGAGAAGGCATGCGAGATAAATCAATCATaGCTACCATCATTTGGGCTC +
Preference number: 5 (lower is better)
Translates to: FDYLLLLSRFCQLNEKACEINQS*LPSFGL
Trigger: GAGCCCAAATGATGGTAGCAATGATTGATTTATCTC...GCATGCCTTCTCGTTAAGTTGACAAAATCTTGACAGGAGTAAAAGATAATCGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp AAAATATGCCTAACATTCATAACATGCTATATATACATGGGGTACCTCAGGCACCAGTCTATGGTATTTTaGTTACAGCAGTCCAAACTG +
Preference number: 5 (lower is better)
Translates to: KICLTFITCYIYMGYLRHQSMVF*LQQSKL
Trigger: CAGTTTGGACTGCTGTAACAAAAATACCATAGACTG...GTGCCTGAGGTACCCCATGTATATATAGCATGTTATGAATGTTAGGCATATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGAAAGAAAGCATGATTTaGCTTCAGAACCACAGAGCT +
Preference number: 5 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHEKESMI*LQNHRA
Trigger: AGCTCTGTGGTTCTGAAGCAAAATCATGCTTTCTTT...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp TGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTTCAAATGAATCATTGTaGTGTCCTCTTGGAAGAGAA +
Preference number: 5 (lower is better)
Translates to: CILRKNHSFFLPWHWVLISNESL*CPLGRE
Trigger: TTCTCTTCCAAGAGGACACAACAATGATTCATTTGA...AATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp TGTATCCTAAGGAAAAATCACTCGTTCTTTTTGCCTTGGCATTGGGTTCTCATTAGTACAGTGTACACTTaGTACCTAGAACTTAGACTT +
Preference number: 5 (lower is better)
Translates to: CILRKNHSFFLPWHWVLISTVYT*YLELRL
Trigger: AAGTCTAAGTTCTAGGTACAAAGTGTACACTGTACT...AATGAGAACCCAATGCCAAGGCAAAAAGAACGAGTGATTTTTCCTTAGGATACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp TTCGATTATCTTTTACTCCTGTCAAGATTTTGTCAACTTAACGAGAAGGCATGCCATGTCTTAGCAAACTaGCTAATCAAACCAGCAACA +
Preference number: 5 (lower is better)
Translates to: FDYLLLLSRFCQLNEKACHVLAN*LIKPAT
Trigger: TGTTGCTGGTTTGATTAGCAAGTTTGCTAAGACATG...GCATGCCTTCTCGTTAAGTTGACAAAATCTTGACAGGAGTAAAAGATAATCGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp ATCTGTGTAACATTTATCAAATGTAATCTGCGTGTCTTTATGTGCACACACGAGAATAAAGTATTCAGGTaGGCCATTTCCAGATTTCCT +
Preference number: 5 (lower is better)
Translates to: ICVTFIKCNLRVFMCTHENKVFR*AISRFP
Trigger: AGGAAATCTGGAAATGGCCAACCTGAATACTTTATT...CTCGTGTGTGCACATAAAGACACGCAGATTACATTTGATAAATGTTACACAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS-3UTR CAA 90 bp AAAATATGCCTAACATTCATAACATGCTATATATACATGGGGTACCTCAGGCACGCCATAAGATCACAGTaGTTTATGACACTGTTTATC +
Preference number: 5 (lower is better)
Translates to: KICLTFITCYIYMGYLRHAIRSQ*FMTLFI
Trigger: GATAAACAGTGTCATAAACAACTGTGATCTTATGGC...GTGCCTGAGGTACCCCATGTATATATAGCATGTTATGAATGTTAGGCATATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS GCA 72 bp CCCAGGGCTCGGTGGACACGGCGGCGGGAGCGGAGATaGCGCCTCGCCGCTGCTGGGCACCAGGGACGGAGG +
Preference number: 6 (lower is better)
Translates to: PRARWTRRRERR*RLAAAGHQGRR
Trigger: CCTCCGTCCCTGGTGCCCAGCAGCGGCGAGGCGGCATCTCCGCTCCCGCCGCCGTGTCCACCGAGCCCTGGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000556335.1
ENST00000557419.5
CDS GCA 72 bp GACACGGCGGCGGGAGCGGAGATGCCGCCTCGCCGCTaGTGGGCACCAGGGACGGAGGACCAGAGGCGCACC +
Preference number: 6 (lower is better)
Translates to: DTAAGAEMPPRR*WAPGTEDQRRT
Trigger: GGTGCGCCTCTGGTCCTCCGTCCCTGGTGCCCAGCAGCGGCGAGGCGGCATCTCCGCTCCCGCCGCCGTGTC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000556335.1
ENST00000557419.5
CDS CCA 72 bp ACGGCGGCGGGAGCGGAGATGCCGCCTCGCCGCTGCTaGGCACCAGGGACGGAGGACCAGAGGCGCACCTCG +
Preference number: 6 (lower is better)
Translates to: TAAGAEMPPRRC*APGTEDQRRTS
Trigger: CGAGGTGCGCCTCTGGTCCTCCGTCCCTGGTGCCCAGCAGCGGCGAGGCGGCATCTCCGCTCCCGCCGCCGT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000556335.1
ENST00000557419.5
CDS CAA 72 bp CCGCTCAGCGCCGCGCCCTCCCCCAGATCCAAACTTTaGCTGGGTCCTCCGGGTGGCGGCGGCGGCGACGGC +
Preference number: 6 (lower is better)
Translates to: PLSAAPSPRSKL*LGPPGGGGGDG
Trigger: GCCGTCGCCGCCGCCGCCACCCGGAGGACCCAGCAAAAGTTTGGATCTGGGGGAGGGCGCGGCGCTGAGCGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000684438.1
CDS CAA 90 bp GTGGTAATCCCGCTCAGCGCCGCGCCCTCCCCCAGATCCAAACTTTaGCTGGGTCCTCCGGGTGGCGGCGGCGGCGACGGCGGCGGCTGC +
Preference number: 6 (lower is better)
Translates to: VVIPLSAAPSPRSKL*LGPPGGGGGDGGGC
Trigger: GCAGCCGCCGCCGTCGCCGCCGCCGCCACCCGGAGGACCCAGCAAAAGTTTGGATCTGGGGGAGGGCGCGGCGCTGAGCGGGATTACCAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000684438.1
CDS CCA 72 bp ATCGTTGAGAACTGCCACCCTGATCCCAGGGCTCGGTaGACACGGCGGCGGGAGCGGAGATGCCGCCTCGCC +
Preference number: 6 (lower is better)
Translates to: IVENCHPDPRAR*TRRRERRCRLA
Trigger: GGCGAGGCGGCATCTCCGCTCCCGCCGCCGTGTCCACCGAGCCCTGGGATCAGGGTGGCAGTTCTCAACGAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000556335.1
ENST00000557419.5
CDS GCA 72 bp CCCCGATCAAGCCCGCCAGCAGAAAGGGGGAGCCCATaGTGTGGGACGTCGTCTGCTCATGGCTGGACGCTG +
Preference number: 6 (lower is better)
Translates to: PRSSPPAERGSP*CGTSSAHGWTL
Trigger: CAGCGTCCAGCCATGAGCAGACGACGTCCCACAGCATGGGCTCCCCCTTTCTGCTGGCGGGCTTGATCGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS CCA 72 bp ATCCGACAGGGTCAGGGAGGTGGAAAGGGAAGACGCTaGCGCGGCAGCAGCGGGGATCCCGGGGCATGGTAT +
Preference number: 6 (lower is better)
Translates to: IRQGQGGGKGRR*RGSSGDPGAWY
Trigger: ATACCATGCCCCGGGATCCCCGCTGCTGCCGCGCCAGCGTCTTCCCTTTCCACCTCCCTGACCCTGTCGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000556335.1
ENST00000557419.5
CDS CCA 72 bp CGCAGGCGCTCTGACGGCTGCGTCTTCTCCTTGCAATaGGCTCATCCGAATCCGACAGGGTCAGGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: RRRSDGCVFSLQ*AHPNPTGSGRW
Trigger: CCACCTCCCTGACCCTGTCGGATTCGGATGAGCCCATTGCAAGGAGAAGACGCAGCCGTCAGAGCGCCTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557419.5
CDS CAA 72 bp CACCTCCGCAGGCGCTCTGACGGCTGCGTCTTCTCCTaGCAATGGGCTCATCCGAATCCGACAGGGTCAGGG +
Preference number: 6 (lower is better)
Translates to: HLRRRSDGCVFS*QWAHPNPTGSG
Trigger: CCCTGACCCTGTCGGATTCGGATGAGCCCATTGCAAGGAGAAGACGCAGCCGTCAGAGCGCCTGCGGAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557419.5
CDS GCA 72 bp ACCTCCGCAGGCGCTCTGACGGCTGCGTCTTCTCCTTaGAATGGGCTCATCCGAATCCGACAGGGTCAGGGA +
Preference number: 6 (lower is better)
Translates to: TSAGALTAASSP*NGLIRIRQGQG
Trigger: TCCCTGACCCTGTCGGATTCGGATGAGCCCATTGCAAGGAGAAGACGCAGCCGTCAGAGCGCCTGCGGAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557419.5
CDS CCA 72 bp ATCAAGCCCGCCAGCAGAAAGGGGGAGCCCATGCTGTaGGACGTCGTCTGCTCATGGCTGGACGCTGTGTTG +
Preference number: 6 (lower is better)
Translates to: IKPASRKGEPML*DVVCSWLDAVL
Trigger: CAACACAGCGTCCAGCCATGAGCAGACGACGTCCCACAGCATGGGCTCCCCCTTTCTGCTGGCGGGCTTGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS GCA 72 bp TGGTATTGTTTTAGGGGTCGCCGCCGAGGTCCCTCCTaGCCATCGTTGAGAACTGCCACCCTGATCCCAGGG +
Preference number: 6 (lower is better)
Translates to: WYCFRGRRRGPS*PSLRTATLIPG
Trigger: CCCTGGGATCAGGGTGGCAGTTCTCAACGATGGGCAGGAGGGACCTCGGCGGCGACCCCTAAAACAATACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000556335.1
ENST00000557419.5
CDS GCA 72 bp GGGACGTCGTCTGCTCATGGCTGGACGCTGTGTTGCTaGCGTTGTTCAGATAGGAGGCATGGGTGGTGGCCT +
Preference number: 6 (lower is better)
Translates to: GTSSAHGWTLCC*RCSDRRHGWWP
Trigger: AGGCCACCACCCATGCCTCCTATCTGAACAACGGCAGCAACACAGCGTCCAGCCATGAGCAGACGACGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS GCA 72 bp AGCAGAAAGGGGGAGCCCATGCTGTGGGACGTCGTCTaGTCATGGCTGGACGCTGTGTTGCTGCCGTTGTTC +
Preference number: 6 (lower is better)
Translates to: SRKGEPMLWDVV*SWLDAVLLPLF
Trigger: GAACAACGGCAGCAACACAGCGTCCAGCCATGAGCAGACGACGTCCCACAGCATGGGCTCCCCCTTTCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS GCA 72 bp CGTGTCTTACCTGTTCGATCCGGATTCCGCCTCGTATaGTCTCCAAGCCTTCGCCACCTCCGCAGGCGCTCT +
Preference number: 6 (lower is better)
Translates to: RVLPVRSGFRLV*SPSLRHLRRRS
Trigger: AGAGCGCCTGCGGAGGTGGCGAAGGCTTGGAGAGCATACGAGGCGGAATCCGGATCGAACAGGTAAGACACG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557419.5
CDS CCA 72 bp GGGAGCCCATGCTGTGGGACGTCGTCTGCTCATGGCTaGACGCTGTGTTGCTGCCGTTGTTCAGATAGGAGG +
Preference number: 6 (lower is better)
Translates to: GSPCCGTSSAHG*TLCCCRCSDRR
Trigger: CCTCCTATCTGAACAACGGCAGCAACACAGCGTCCAGCCATGAGCAGACGACGTCCCACAGCATGGGCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS GCA 72 bp TGTGGGACGTCGTCTGCTCATGGCTGGACGCTGTGTTaGTGCCGTTGTTCAGATAGGAGGCATGGGTGGTGG +
Preference number: 6 (lower is better)
Translates to: CGTSSAHGWTLC*CRCSDRRHGWW
Trigger: CCACCACCCATGCCTCCTATCTGAACAACGGCAGCAACACAGCGTCCAGCCATGAGCAGACGACGTCCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS GCA 72 bp CGCAGCCCCTTTTACCTGACGGCTGCGTCTTCTCCTTaGAATGGGCTCATCCGAATCCGACAGGGTCAGGGA +
Preference number: 6 (lower is better)
Translates to: RSPFYLTAASSP*NGLIRIRQGQG
Trigger: TCCCTGACCCTGTCGGATTCGGATGAGCCCATTGCAAGGAGAAGACGCAGCCGTCAGGTAAAAGGGGCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554746.1
CDS CCA 72 bp CAGAGGCGCACCTCGGAAAGGAGTAGCTCAGCGCCTTaGCGCGGAGATTTGCGGGCACTGATGATATCTCGA +
Preference number: 6 (lower is better)
Translates to: QRRTSERSSSAP*RGDLRALMISR
Trigger: TCGAGATATCATCAGTGCCCGCAAATCTCCGCGCCAAGGCGCTGAGCTACTCCTTTCCGAGGTGCGCCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330753.6
ENST00000556335.1
ENST00000557419.5
CDS CCA 72 bp CCCCTTTTACCTGACGGCTGCGTCTTCTCCTTGCAATaGGCTCATCCGAATCCGACAGGGTCAGGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: PLLPDGCVFSLQ*AHPNPTGSGRW
Trigger: CCACCTCCCTGACCCTGTCGGATTCGGATGAGCCCATTGCAAGGAGAAGACGCAGCCGTCAGGTAAAAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554746.1
CDS CAA 72 bp ACGCAGCCCCTTTTACCTGACGGCTGCGTCTTCTCCTaGCAATGGGCTCATCCGAATCCGACAGGGTCAGGG +
Preference number: 6 (lower is better)
Translates to: TQPLLPDGCVFS*QWAHPNPTGSG
Trigger: CCCTGACCCTGTCGGATTCGGATGAGCCCATTGCAAGGAGAAGACGCAGCCGTCAGGTAAAAGGGGCTGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554746.1
CDS CCA 72 bp ATGGGTCCAGCCCGTCCCAGTTATCCTCTTCCCCTATaGCTTCATTCCCGTTGTCAGTACCCCGACCTCAGC +
Preference number: 6 (lower is better)
Translates to: MGPARPSYPLPL*LHSRCQYPDLS
Trigger: GCTGAGGTCGGGGTACTGACAACGGGAATGAAGCCATAGGGGAAGAGGATAACTGGGACGGGCTGGACCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684303.1
CDS CAA 72 bp TCGGAAAGGAGTAGCTCAGCGCCTTGGCGCGGAGATTaGCGGGCACTGATGATATCTCGAGCGCTCGTTCCT +
Preference number: 6 (lower is better)
Translates to: SERSSSAPWRGD*RALMISRALVP
Trigger: AGGAACGAGCGCTCGAGATATCATCAGTGCCCGCAAATCTCCGCGCCAAGGCGCTGAGCTACTCCTTTCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330753.6
ENST00000556335.1
ENST00000557419.5
CDS CAA 90 bp AATCTGGCAACGCAGCCCCTTTTACCTGACGGCTGCGTCTTCTCCTaGCAATGGGCTCATCCGAATCCGACAGGGTCAGGGAGGTGGAAA +
Preference number: 6 (lower is better)
Translates to: NLATQPLLPDGCVFS*QWAHPNPTGSGRWK
Trigger: TTTCCACCTCCCTGACCCTGTCGGATTCGGATGAGCCCATTGCAAGGAGAAGACGCAGCCGTCAGGTAAAAGGGGCTGCGTTGCCAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554746.1
CDS TCA 72 bp GCACTGATGATATCTCGAGCGCTCGTTCCTCCGCGGTaGCAATGGATAATGCCAAACGCGCAAGTGACGGCG +
Preference number: 6 (lower is better)
Translates to: ALMISRALVPPR*QWIMPNAQVTA
Trigger: CGCCGTCACTTGCGCGTTTGGCATTATCCATTGTCACCGCGGAGGAACGAGCGCTCGAGATATCATCAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330753.6
ENST00000556335.1
ENST00000557419.5
CDS GCA 72 bp GCTGTCACGTATGGCAGTGCTCCAGGTCTGGCACGCTaGTGTTGCAGTATCGCATGTTGTTGGGGATATGGC +
Preference number: 6 (lower is better)
Translates to: AVTYGSAPGLAR*CCSIACCWGYG
Trigger: GCCATATCCCCAACAACATGCGATACTGCAACAGCAGCGTGCCAGACCTGGAGCACTGCCATACGTGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS GCA 72 bp TGCAATCTGGCAACGCAGCCCCTTTTACCTGACGGCTaGGTCTTCTCCTTGCAATGGGCTCATCCGAATCCG +
Preference number: 6 (lower is better)
Translates to: CNLATQPLLPDG*VFSLQWAHPNP
Trigger: CGGATTCGGATGAGCCCATTGCAAGGAGAAGACGCAGCCGTCAGGTAAAAGGGGCTGCGTTGCCAGATTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554746.1
CDS CCA 72 bp AATCTGCAATCTGACGGCTGCGTCTTCTCCTTGCAATaGGCTCATCCGAATCCGACAGGGTCAGGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: NLQSDGCVFSLQ*AHPNPTGSGRW
Trigger: CCACCTCCCTGACCCTGTCGGATTCGGATGAGCCCATTGCAAGGAGAAGACGCAGCCGTCAGATTGCAGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS CCA 72 bp GGTAGGAGTTGGAGGCGTGTAGCTTCTGCTAGGGTTTaGAATAGAGAGGGTGGGAGGCTGAGTGGTCGGAGA +
Preference number: 6 (lower is better)
Translates to: GRSWRRVASARV*NREGGRLSGRR
Trigger: TCTCCGACCACTCAGCCTCCCACCCTCTCTATTCCAAACCCTAGCAGAAGCTACACGCCTCCAACTCCTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS CAA 90 bp TCCAGCCCGTCCCAGTTATCCTCTTCCCCTATGGCTTCATTCCCGTaGTCAGTACCCCGACCTCAGCTTGCAACCTTGATCTTGGGCTTG +
Preference number: 6 (lower is better)
Translates to: SSPSQLSSSPMASFP*SVPRPQLATLILGL
Trigger: CAAGCCCAAGATCAAGGTTGCAAGCTGAGGTCGGGGTACTGACAACGGGAATGAAGCCATAGGGGAAGAGGATAACTGGGACGGGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684303.1
CDS TCA 72 bp CTCAATCTGCAATCTGGCAACGCAGCCCCTTTTACCTaGCGGCTGCGTCTTCTCCTTGCAATGGGCTCATCC +
Preference number: 6 (lower is better)
Translates to: LNLQSGNAAPFT*RLRLLLAMGSS
Trigger: GGATGAGCCCATTGCAAGGAGAAGACGCAGCCGTCAGGTAAAAGGGGCTGCGTTGCCAGATTGCAGATTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554746.1
CDS GCA 72 bp AGCTCAATCTGCAATCTGACGGCTGCGTCTTCTCCTTaGAATGGGCTCATCCGAATCCGACAGGGTCAGGGA +
Preference number: 6 (lower is better)
Translates to: SSICNLTAASSP*NGLIRIRQGQG
Trigger: TCCCTGACCCTGTCGGATTCGGATGAGCCCATTGCAAGGAGAAGACGCAGCCGTCAGATTGCAGATTGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS GCA 72 bp ACGTATGGCAGTGCTCCAGGTCTGGCACGCTGCTGTTaGAGTATCGCATGTTGTTGGGGATATGGCAGTCTG +
Preference number: 6 (lower is better)
Translates to: TYGSAPGLARCC*SIACCWGYGSL
Trigger: CAGACTGCCATATCCCCAACAACATGCGATACTGCAACAGCAGCGTGCCAGACCTGGAGCACTGCCATACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS CCA 72 bp GTTGTCCTGCAAATAGAGCCTGATCAGATGCGTACCTaGGAGATCGGGAGGAGGGTGGGACAGCGAATTACG +
Preference number: 6 (lower is better)
Translates to: VVLQIEPDQMRT*EIGRRVGQRIT
Trigger: CGTAATTCGCTGTCCCACCCTCCTCCCGATCTCCCAGGTACGCATCTGATCAGGCTCTATTTGCAGGACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS CCA 72 bp TGTTGCTGCCGTTGTTCAGATAGGAGGCATGGGTGGTaGCCTCTGAACAAATGGTGTCTTCTACCGCGCGGT +
Preference number: 6 (lower is better)
Translates to: CCCRCSDRRHGW*PLNKWCLLPRG
Trigger: ACCGCGCGGTAGAAGACACCATTTGTTCAGAGGCCACCACCCATGCCTCCTATCTGAACAACGGCAGCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS CCA 72 bp CTGTGTTGCTGCCGTTGTTCAGATAGGAGGCATGGGTaGTGGCCTCTGAACAAATGGTGTCTTCTACCGCGC +
Preference number: 6 (lower is better)
Translates to: LCCCRCSDRRHG*WPLNKWCLLPR
Trigger: GCGCGGTAGAAGACACCATTTGTTCAGAGGCCACCACCCATGCCTCCTATCTGAACAACGGCAGCAACACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS CCA 72 bp CCATTAAAATCTGACGGCTGCGTCTTCTCCTTGCAATaGGCTCATCCGAATCCGACAGGGTCAGGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: PLKSDGCVFSLQ*AHPNPTGSGRW
Trigger: CCACCTCCCTGACCCTGTCGGATTCGGATGAGCCCATTGCAAGGAGAAGACGCAGCCGTCAGATTTTAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556335.1
CDS CAA 72 bp AAGCTCAATCTGCAATCTGACGGCTGCGTCTTCTCCTaGCAATGGGCTCATCCGAATCCGACAGGGTCAGGG +
Preference number: 6 (lower is better)
Translates to: KLNLQSDGCVFS*QWAHPNPTGSG
Trigger: CCCTGACCCTGTCGGATTCGGATGAGCCCATTGCAAGGAGAAGACGCAGCCGTCAGATTGCAGATTGAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330753.6
CDS CAA 72 bp TCGGGTCCATTAAAATCTGACGGCTGCGTCTTCTCCTaGCAATGGGCTCATCCGAATCCGACAGGGTCAGGG +
Preference number: 6 (lower is better)
Translates to: SGPLKSDGCVFS*QWAHPNPTGSG
Trigger: CCCTGACCCTGTCGGATTCGGATGAGCCCATTGCAAGGAGAAGACGCAGCCGTCAGATTTTAATGGACCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556335.1
CDS TCA 72 bp GCACACACTAGGGCAGGCCAGGAGTTTGGACACCTGTaGGTAGAGCCCCAGGGAAATGATAAGCCAAGACTT +
Preference number: 6 (lower is better)
Translates to: AHTRAGQEFGHL*VEPQGNDKPRL
Trigger: AAGTCTTGGCTTATCATTTCCCTGGGGCTCTACTCACAGGTGTCCAAACTCCTGGCCTGCCCTAGTGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
ENST00000684303.1
CDS TCA 72 bp CTCAGGTGTTGCTTCTCACCGCTGACTATGCGCTCCTaGACGATGCCCCCTACTAAACTGTGGCCCATTTTC +
Preference number: 6 (lower is better)
Translates to: LRCCFSPLTMRS*TMPPTKLWPIF
Trigger: GAAAATGGGCCACAGTTTAGTAGGGGGCATCGTTCAGGAGCGCATAGTCAGCGGTGAGAAGCAACACCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS CAA 90 bp TCGGGAGGAGGGTGGGACAGCGAATTACGTACAATTGAAAATTCCTaGAGCTTGGTGAGATGGCTGAAGGTGCCCTCGGCGATACCCTTG +
Preference number: 6 (lower is better)
Translates to: SGGGWDSELRTIENS*SLVRWLKVPSAIPL
Trigger: CAAGGGTATCGCCGAGGGCACCTTCAGCCATCTCACCAAGCTCAAGGAATTTTCAATTGTACGTAATTCGCTGTCCCACCCTCCTCCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS TCA 72 bp GCCGTTGTTCAGATAGGAGGCATGGGTGGTGGCCTCTaGACAAATGGTGTCTTCTACCGCGCGGTAGTTAAA +
Preference number: 6 (lower is better)
Translates to: AVVQIGGMGGGL*TNGVFYRAVVK
Trigger: TTTAACTACCGCGCGGTAGAAGACACCATTTGTTCAGAGGCCACCACCCATGCCTCCTATCTGAACAACGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS TCA 72 bp CAATATTTACATAGCCCATCTTCTCCCCACAGTATGTaGCTAATACGTATCCCGGGGAGGAGGGAGCGCGGC +
Preference number: 6 (lower is better)
Translates to: QYLHSPSSPHSM*LIRIPGRRERG
Trigger: GCCGCGCTCCCTCCTCCCCGGGATACGTATTAGTCACATACTGTGGGGAGAAGATGGGCTATGTAAATATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684303.1
CDS CAA 72 bp GACATTCTTGGGAAGGTTCATGGGGAATTCGTCCAGTaGGTTGCCATACAGGTAGACCGTGTGCACCGACTG +
Preference number: 6 (lower is better)
Translates to: DILGKVHGEFVQ*VAIQVDRVHRL
Trigger: CAGTCGGTGCACACGGTCTACCTGTATGGCAACCAACTGGACGAATTCCCCATGAACCTTCCCAAGAATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
ENST00000684303.1
CDS CAA 72 bp GGGTGGGACAGCGAATTACGTACAATTGAAAATTCCTaGAGCTTGGTGAGATGGCTGAAGGTGCCCTCGGCG +
Preference number: 6 (lower is better)
Translates to: GWDSELRTIENS*SLVRWLKVPSA
Trigger: CGCCGAGGGCACCTTCAGCCATCTCACCAAGCTCAAGGAATTTTCAATTGTACGTAATTCGCTGTCCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS CAA 90 bp GGAGGGTGGGACAGCGAATTACGTACAATTGAAAATTCCTTGAGCTaGGTGAGATGGCTGAAGGTGCCCTCGGCGATACCCTTGTTGGTC +
Preference number: 6 (lower is better)
Translates to: GGWDSELRTIENSLS*VRWLKVPSAIPLLV
Trigger: GACCAACAAGGGTATCGCCGAGGGCACCTTCAGCCATCTCACCAAGCTCAAGGAATTTTCAATTGTACGTAATTCGCTGTCCCACCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS CAA 90 bp ATGGCTTCATTCCCGTTGTCAGTACCCCGACCTCAGCTTGCAACCTaGATCTTGGGCTTGATTATAAATGACGAAAGACCGCGGCAGCCT +
Preference number: 6 (lower is better)
Translates to: MASFPLSVPRPQLAT*ILGLIINDERPRQP
Trigger: AGGCTGCCGCGGTCTTTCGTCATTTATAATCAAGCCCAAGATCAAGGTTGCAAGCTGAGGTCGGGGTACTGACAACGGGAATGAAGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684303.1
CDS TCA 72 bp GAGTACAGTTACGCCCTCCGGGATCCCAAGAGGCACTaGGGTCAAGCTTCGCTCATTACAGTAGACAAAGTT +
Preference number: 6 (lower is better)
Translates to: EYSYALRDPKRH*GQASLITVDKV
Trigger: AACTTTGTCTACTGTAATGAGCGAAGCTTGACCTCAGTGCCTCTTGGGATCCCGGAGGGCGTAACTGTACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
ENST00000684303.1
CDS TCA 72 bp GAATGTGGTTTATCTGGTTGTCCTGCAAATAGAGCCTaGTCAGATGCGTACCTGGGAGATCGGGAGGAGGGT +
Preference number: 6 (lower is better)
Translates to: ECGLSGCPANRA*SDAYLGDREEG
Trigger: ACCCTCCTCCCGATCTCCCAGGTACGCATCTGATCAGGCTCTATTTGCAGGACAACCAGATAAACCACATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS TCA 72 bp TGGTGGGACAGGACAAAAGATTCATATTTAATTCCCTaGCGGCCATCCCCCGGACTTGTTCAGGACCTTGGC +
Preference number: 6 (lower is better)
Translates to: WWDRTKDSYLIP*RPSPGLVQDLG
Trigger: GCCAAGGTCCTGAACAAGTCCGGGGGATGGCCGTCAGGGAATTAAATATGAATCTTTTGTCCTGTCCCACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS GCA 72 bp TCTTGGGAAGGTTCATGGGGAATTCGTCCAGTTGGTTaGCATACAGGTAGACCGTGTGCACCGACTGTACAT +
Preference number: 6 (lower is better)
Translates to: SWEGSWGIRPVG*HTGRPCAPTVH
Trigger: ATGTACAGTCGGTGCACACGGTCTACCTGTATGGCAACCAACTGGACGAATTCCCCATGAACCTTCCCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
ENST00000684303.1
CDS GCA 72 bp TCCACAACTGTAAGTTTCCTGAGGCCTCCCCAGCCATaGTTTCTGTGCAGCCTGAGGAACTGTGAGTCAATT +
Preference number: 6 (lower is better)
Translates to: STTVSFLRPPQP*FLCSLRNCESI
Trigger: AATTGACTCACAGTTCCTCAGGCTGCACAGAAAGCATGGCTGGGGAGGCCTCAGGAAACTTACAGTTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684438.1
CDS CAA 90 bp GAGAACTCTGACATTCTTGGGAAGGTTCATGGGGAATTCGTCCAGTaGGTTGCCATACAGGTAGACCGTGTGCACCGACTGTACATTGTG +
Preference number: 6 (lower is better)
Translates to: ENSDILGKVHGEFVQ*VAIQVDRVHRLYIV
Trigger: CACAATGTACAGTCGGTGCACACGGTCTACCTGTATGGCAACCAACTGGACGAATTCCCCATGAACCTTCCCAAGAATGTCAGAGTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
ENST00000684303.1
CDS TCA 72 bp TCAGCTTGCAACCTTGATCTTGGGCTTGATTATAAATaGCGAAAGACCGCGGCAGCCTTCAAAGTGCGGGAG +
Preference number: 6 (lower is better)
Translates to: SACNLDLGLDYK*RKTAAAFKVRE
Trigger: CTCCCGCACTTTGAAGGCTGCCGCGGTCTTTCGTCATTTATAATCAAGCCCAAGATCAAGGTTGCAAGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684303.1
CDS GCA 72 bp TCACATCAAAGGCGCCATAATCAGCCCTCCAAATCTTaGCATCAACCCAAAGGTCTCCGTGTCTTACCTGTC +
Preference number: 6 (lower is better)
Translates to: SHQRRHNQPSKS*HQPKGLRVLPV
Trigger: GACAGGTAAGACACGGAGACCTTTGGGTTGATGGCAAGATTTGGAGGGCTGATTATGGCGCCTTTGATGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556335.1
CDS CCA 72 bp CTGATCAGATGCGTACCTGGGAGATCGGGAGGAGGGTaGGACAGCGAATTACGTACAATTGAAAATTCCTTG +
Preference number: 6 (lower is better)
Translates to: LIRCVPGRSGGG*DSELRTIENSL
Trigger: CAAGGAATTTTCAATTGTACGTAATTCGCTGTCCCACCCTCCTCCCGATCTCCCAGGTACGCATCTGATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS CCA 72 bp GTCAGGAATCGTGGGAAGTTTCGATGTGGTAGGAGTTaGAGGCGTGTAGCTTCTGCTAGGGTTTGGAATAGA +
Preference number: 6 (lower is better)
Translates to: VRNRGKFRCGRS*RRVASARVWNR
Trigger: TCTATTCCAAACCCTAGCAGAAGCTACACGCCTCCAACTCCTACCACATCGAAACTTCCCACGATTCCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS CCA 72 bp TACAGGCAGAGAAGAGCAGGTAGCCAAGTGCCACTTTaGTGTTCTGCCATGTCAACATTCAAAACAGGGCCA +
Preference number: 6 (lower is better)
Translates to: YRQRRAGSQVPL*CSAMSTFKTGP
Trigger: TGGCCCTGTTTTGAATGTTGACATGGCAGAACACCAAAGTGGCACTTGGCTACCTGCTCTTCTCTGCCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684438.1
CDS CAA 72 bp GACAGCGAATTACGTACAATTGAAAATTCCTTGAGCTaGGTGAGATGGCTGAAGGTGCCCTCGGCGATACCC +
Preference number: 6 (lower is better)
Translates to: DSELRTIENSLS*VRWLKVPSAIP
Trigger: GGGTATCGCCGAGGGCACCTTCAGCCATCTCACCAAGCTCAAGGAATTTTCAATTGTACGTAATTCGCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS CAA 90 bp CATGTCGGATATGACAGCAATTCGATTTTCATCCACTCTCAGCTCTaGCAAGTCCACAGGAAGCCCAACAGGCACACTGCTCAGGTGATT +
Preference number: 6 (lower is better)
Translates to: HVGYDSNSIFIHSQL*QVHRKPNRHTAQVI
Trigger: AATCACCTGAGCAGTGTGCCTGTTGGGCTTCCTGTGGACTTGCAAGAGCTGAGAGTGGATGAAAATCGAATTGCTGTCATATCCGACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS GCA 72 bp TCACATCAAAGGCGCCATAATCAGCCCTCCAAATCTTaGCATCAACCCAAAGGTCTCCGTGTCTTACCTGTT +
Preference number: 6 (lower is better)
Translates to: SHQRRHNQPSKS*HQPKGLRVLPV
Trigger: AACAGGTAAGACACGGAGACCTTTGGGTTGATGGCAAGATTTGGAGGGCTGATTATGGCGCCTTTGATGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557419.5
CDS CCA 72 bp ATGGCAAGTTATCAGCCGTGTCAACACAAGCCCAAGTaGGCAGGCAGAACTCTCTTCTTCTTTTGTAGGTCA +
Preference number: 6 (lower is better)
Translates to: MASYQPCQHKPK*AGRTLFFFCRS
Trigger: TGACCTACAAAAGAAGAAGAGAGTTCTGCCTGCCCACTTGGGCTTGTGTTGACACGGCTGATAACTTGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
ENST00000684303.1
CDS CCA 72 bp CCGTCCACAATAAGACGCTCCAAGCTCGTGAGATTCTaGAAGGCCATGTCGGATATGACAGCAATTCGATTT +
Preference number: 6 (lower is better)
Translates to: PSTIRRSKLVRF*KAMSDMTAIRF
Trigger: AAATCGAATTGCTGTCATATCCGACATGGCCTTCCAGAATCTCACGAGCTTGGAGCGTCTTATTGTGGACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS CCA 72 bp TTACGTACAATTGAAAATTCCTTGAGCTTGGTGAGATaGCTGAAGGTGCCCTCGGCGATACCCTTGTTGGTC +
Preference number: 6 (lower is better)
Translates to: LRTIENSLSLVR*LKVPSAIPLLV
Trigger: GACCAACAAGGGTATCGCCGAGGGCACCTTCAGCCATCTCACCAAGCTCAAGGAATTTTCAATTGTACGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS CCA 72 bp CAAAAACCCCTTGAGTCAGCATCCGCAGTTGGTTGTTaGATATATCCAGCCGTTCCAGCTTACGCAGATTTG +
Preference number: 6 (lower is better)
Translates to: QKPLESASAVGC*IYPAVPAYADL
Trigger: CAAATCTGCGTAAGCTGGAACGGCTGGATATATCCAACAACCAACTGCGGATGCTGACTCAAGGGGTTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS CAA 72 bp TATGACAGCAATTCGATTTTCATCCACTCTCAGCTCTaGCAAGTCCACAGGAAGCCCAACAGGCACACTGCT +
Preference number: 6 (lower is better)
Translates to: YDSNSIFIHSQL*QVHRKPNRHTA
Trigger: AGCAGTGTGCCTGTTGGGCTTCCTGTGGACTTGCAAGAGCTGAGAGTGGATGAAAATCGAATTGCTGTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS CCA 72 bp GGGGATATGGCAGTCTGTGTAATTAATGCCCCCATTTaGGGTGTAAATGGGCTGCAGTCTGAAATCTCCTTT +
Preference number: 6 (lower is better)
Translates to: GDMAVCVINAPI*GVNGLQSEISF
Trigger: AAAGGAGATTTCAGACTGCAGCCCATTTACACCCCAAATGGGGGCATTAATTACACAGACTGCCATATCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS CCA 72 bp ATGTTGAATTGTAATCCCCACATTGGAGAAGGGGCCTaGAAGGAGGTGATTGAATCATGTAGGTGGACTTCC +
Preference number: 6 (lower is better)
Translates to: MLNCNPHIGEGA*KEVIESCRWTS
Trigger: GGAAGTCCACCTACATGATTCAATCACCTCCTTCCAGGCCCCTTCTCCAATGTGGGGATTACAATTCAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684438.1
CDS CAA 72 bp GAGATTATCAAAAACCCCTTGAGTCAGCATCCGCAGTaGGTTGTTGGATATATCCAGCCGTTCCAGCTTACG +
Preference number: 6 (lower is better)
Translates to: EIIKNPLSQHPQ*VVGYIQPFQLT
Trigger: CGTAAGCTGGAACGGCTGGATATATCCAACAACCAACTGCGGATGCTGACTCAAGGGGTTTTTGATAATCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS CAA 72 bp CATCCTGCTTCTCAGTCACCTCTAGGTCTCTGGAACTaGAAAGCTATGTCTCTTCTTGCAGGGTTCTGTTAC +
Preference number: 6 (lower is better)
Translates to: HPASQSPLGLWN*KAMSLLAGFCY
Trigger: GTAACAGAACCCTGCAAGAAGAGACATAGCTTTCAAGTTCCAGAGACCTAGAGGTGACTGAGAAGCAGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555398.1
ENST00000557419.5
ENST00000684438.1
CDS TCA 72 bp TTCAAGAGCTGGGCAAGAGCAGCCCGTGAAATGGTCTaGATATTGTTTTCCTGCAAATGGAGAACTCTGACA +
Preference number: 6 (lower is better)
Translates to: FKSWARAAREMV*ILFSCKWRTLT
Trigger: TGTCAGAGTTCTCCATTTGCAGGAAAACAATATTCAGACCATTTCACGGGCTGCTCTTGCCCAGCTCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
ENST00000684303.1
CDS TCA 72 bp AGCTGCTTCAGGTTGGAGAGATTATCAAAAACCCCTTaGGTCAGCATCCGCAGTTGGTTGTTGGATATATCC +
Preference number: 6 (lower is better)
Translates to: SCFRLERLSKTP*VSIRSWLLDIS
Trigger: GGATATATCCAACAACCAACTGCGGATGCTGACTCAAGGGGTTTTTGATAATCTCTCCAACCTGAAGCAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS TCA 72 bp ATGATGCAATCATGTGACGACATTCTTTCCCGTTATTaGACCGTGTGGCCTGAATACTGCCCTAAAGGACAG +
Preference number: 6 (lower is better)
Translates to: MMQSCDDILSRY*TVWPEYCPKGQ
Trigger: CTGTCCTTTAGGGCAGTATTCAGGCCACACGGTTCAATAACGGGAAAGAATGTCGTCACATGATTGCATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557419.5
ENST00000684438.1
CDS CAA 90 bp CCTTGGCACATGAAACCCCGCACGTTGAGAGATGAAGGGATATATTaGAGCCATTCTGTGACCCATTTAATACTGCAGTCACAAAACCAA +
Preference number: 6 (lower is better)
Translates to: PWHMKPRTLRDEGIY*SHSVTHLILQSQNQ
Trigger: TTGGTTTTGTGACTGCAGTATTAAATGGGTCACAGAATGGCTCAAATATATCCCTTCATCTCTCAACGTGCGGGGTTTCATGTGCCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS CAA 90 bp TTTCTGGTACATCCTGCTTCTCAGTCACCTCTAGGTCTCTGGAACTaGAAAGCTATGTCTCTTCTTGCAGGGTTCTGTTACAATCCATTG +
Preference number: 6 (lower is better)
Translates to: FLVHPASQSPLGLWN*KAMSLLAGFCYNPL
Trigger: CAATGGATTGTAACAGAACCCTGCAAGAAGAGACATAGCTTTCAAGTTCCAGAGACCTAGAGGTGACTGAGAAGCAGGATGTACCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555398.1
ENST00000557419.5
ENST00000684438.1
CDS CAA 90 bp GTCACTGGCCAAATCAATTCGTGGGTTATGAGAAAACAATGCCATTaGGCTGAAATATTCCCTATGTACAGGCAGAGAAGAGCAGGTAGC +
Preference number: 6 (lower is better)
Translates to: VTGQINSWVMRKQCH*AEIFPMYRQRRAGS
Trigger: GCTACCTGCTCTTCTCTGCCTGTACATAGGGAATATTTCAGCCAAATGGCATTGTTTTCTCATAACCCACGAATTGATTTGGCCAGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684438.1
CDS TCA 72 bp CTCACCACATGGCTACCTTTTCTCACTGGCAAGAAGTaGATTAAGTCATCAGTAATCTCAGTCGGGTCCATT +
Preference number: 6 (lower is better)
Translates to: LTTWLPFLTGKK*IKSSVISVGSI
Trigger: AATGGACCCGACTGAGATTACTGATGACTTAATTCACTTCTTGCCAGTGAGAAAAGGTAGCCATGTGGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556335.1
CDS TCA 72 bp GTGCTATTACAATTCTCATCGTCCAGATGTAGGAGCTaGTTTGCAGAGGATGCGAAGCTGCACAGTTTAAGA +
Preference number: 6 (lower is better)
Translates to: VLLQFSSSRCRS*FAEDAKLHSLR
Trigger: TCTTAAACTGTGCAGCTTCGCATCCTCTGCAAATCAGCTCCTACATCTGGACGATGAGAATTGTAATAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684438.1
CDS GCA 72 bp ATAAGTAGAACAAGAAGCCCAGTTTCTGGTACATCCTaGTTCTCAGTCACCTCTAGGTCTCTGGAACTTGAA +
Preference number: 6 (lower is better)
Translates to: ISRTRSPVSGTS*FSVTSRSLELE
Trigger: TTCAAGTTCCAGAGACCTAGAGGTGACTGAGAAGCAGGATGTACCAGAAACTGGGCTTCTTGTTCTACTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555398.1
ENST00000557419.5
ENST00000684438.1
CDS TCA 72 bp AAGTCCACAGGAAGCCCAACAGGCACACTGCTCAGGTaGTTCTTAGACAAAAACAACAATTTGAGGCTAATA +
Preference number: 6 (lower is better)
Translates to: KSTGSPTGTLLR*FLDKNNNLRLI
Trigger: TATTAGCCTCAAATTGTTGTTTTTGTCTAAGAATCACCTGAGCAGTGTGCCTGTTGGGCTTCCTGTGGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
ENST00000684303.1
CDS CAA 72 bp ATGAAACCCCGCACGTTGAGAGATGAAGGGATATATTaGAGCCATTCTGTGACCCATTTAATACTGCAGTCA +
Preference number: 6 (lower is better)
Translates to: MKPRTLRDEGIY*SHSVTHLILQS
Trigger: TGACTGCAGTATTAAATGGGTCACAGAATGGCTCAAATATATCCCTTCATCTCTCAACGTGCGGGGTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330753.6
ENST00000554746.1
ENST00000682132.1
ENST00000683129.1
CDS CAA 90 bp AACTTGAAAGCTATGTCTCTTCTTGCAGGGTTCTGTTACAATCCATaGATTTTCCCTCACGGTATAAAGTTCCCTTTGCTTAGTTTCACT +
Preference number: 6 (lower is better)
Translates to: NLKAMSLLAGFCYNP*IFPHGIKFPLLSFT
Trigger: AGTGAAACTAAGCAAAGGGAACTTTATACCGTGAGGGAAAATCAATGGATTGTAACAGAACCCTGCAAGAAGAGACATAGCTTTCAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555398.1
ENST00000557419.5
ENST00000684438.1
CDS CAA 90 bp CACATGATAAATCTTATCTATCTCACATCACAACCAAAAACCCCTTaGAGATCAGTGCTATTACAATTCTCATCGTCCAGATGTAGGAGC +
Preference number: 6 (lower is better)
Translates to: HMINLIYLTSQPKTP*RSVLLQFSSSRCRS
Trigger: GCTCCTACATCTGGACGATGAGAATTGTAATAGCACTGATCTCAAAGGGGTTTTTGGTTGTGATGTGAGATAGATAAGATTTATCATGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684438.1
CDS GCA 72 bp TATGCAAAAACAATATATGACACTCCAGGCTGCATATaGTATTTGGGTCAGGAAGGCTTTCATTATCTTCGT +
Preference number: 6 (lower is better)
Translates to: YAKTIYDTPGCI*YLGQEGFHYLR
Trigger: ACGAAGATAATGAAAGCCTTCCTGACCCAAATAGCATATGCAGCCTGGAGTGTCATATATTGTTTTTGCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000684438.1
CDS CCA 72 bp AAACAATATATGACACTCCAGGCTGCATATGCTATTTaGGTCAGGAAGGCTTTCATTATCTTCGTTCAGAAA +
Preference number: 6 (lower is better)
Translates to: KQYMTLQAAYAI*VRKAFIIFVQK
Trigger: TTTCTGAACGAAGATAATGAAAGCCTTCCTGACCCAAATAGCATATGCAGCCTGGAGTGTCATATATTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684438.1
CDS CAA 72 bp CAAATCAATTCGTGGGTTATGAGAAAACAATGCCATTaGGCTGAAATATTCCCTATGTACAGGCAGAGAAGA +
Preference number: 6 (lower is better)
Translates to: QINSWVMRKQCH*AEIFPMYRQRR
Trigger: TCTTCTCTGCCTGTACATAGGGAATATTTCAGCCAAATGGCATTGTTTTCTCATAACCCACGAATTGATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684438.1
CDS CAA 72 bp AAAACAATATATGACACTCCAGGCTGCATATGCTATTaGGGTCAGGAAGGCTTTCATTATCTTCGTTCAGAA +
Preference number: 6 (lower is better)
Translates to: KTIYDTPGCICY*GQEGFHYLRSE
Trigger: TTCTGAACGAAGATAATGAAAGCCTTCCTGACCCAAATAGCATATGCAGCCTGGAGTGTCATATATTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684438.1
CDS CAA 90 bp TATCTTACAAATTGCATACCAAGACTGGCAGAGTTCATAACTTTGTaGCTCTTTTCTTGCTATCATAGAAATGGTAAGGCAGAGAGCCAA +
Preference number: 6 (lower is better)
Translates to: YLTNCIPRLAEFITL*LFSCYHRNGKAESQ
Trigger: TTGGCTCTCTGCCTTACCATTTCTATGATAGCAAGAAAAGAGCAACAAAGTTATGAACTCTGCCAGTCTTGGTATGCAATTTGTAAGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684438.1
CDS CAA 72 bp TGCGAGACGTTAAAAAGCCATATTCAAATCACGGGGTaGTGCAACACAAACATGTTGTACAGAATGTATTAT +
Preference number: 6 (lower is better)
Translates to: CETLKSHIQITG*CNTNMLYRMYY
Trigger: ATAATACATTCTGTACAACATGTTTGTGTTGCACAACCCCGTGATTTGAATATGGCTTTTTAACGTCTCGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553627.1
CDS CAA 72 bp AATCTTATCTATCTCACATCACAACCAAAAACCCCTTaGAGATCAGTGCTATTACAATTCTCATCGTCCAGA +
Preference number: 6 (lower is better)
Translates to: NLIYLTSQPKTP*RSVLLQFSSSR
Trigger: TCTGGACGATGAGAATTGTAATAGCACTGATCTCAAAGGGGTTTTTGGTTGTGATGTGAGATAGATAAGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684438.1
CDS CAA 72 bp AATTGCATACCAAGACTGGCAGAGTTCATAACTTTGTaGCTCTTTTCTTGCTATCATAGAAATGGTAAGGCA +
Preference number: 6 (lower is better)
Translates to: NCIPRLAEFITL*LFSCYHRNGKA
Trigger: TGCCTTACCATTTCTATGATAGCAAGAAAAGAGCAACAAAGTTATGAACTCTGCCAGTCTTGGTATGCAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684438.1
CDS CCA 72 bp ATCCAAGCAATACATATTCGAGTAATACATAGTCACTaGCCAAATCAATTCGTGGGTTATGAGAAAACAATG +
Preference number: 6 (lower is better)
Translates to: IQAIHIRVIHSH*PNQFVGYEKTM
Trigger: CATTGTTTTCTCATAACCCACGAATTGATTTGGCCAGTGACTATGTATTACTCGAATATGTATTGCTTGGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684438.1
CDS CAA 72 bp TGTAATGGAGAGGTAGTAATATCACTATTAATAATATaGGGAAACTATCGGGGTCCCAGATGCCACATAATA +
Preference number: 6 (lower is better)
Translates to: CNGEVVISLLII*GNYRGPRCHII
Trigger: TATTATGTGGCATCTGGGACCCCGATAGTTTCCCAATATTATTAATAGTGATATTACTACCTCTCCATTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684438.1
CDS TCA 72 bp GACAGATTACTTATGAGACAAATAGCAGCACACAAGTaGTGTTATGACAAAAGCTATTTTGATGACTGCATA +
Preference number: 6 (lower is better)
Translates to: DRLLMRQIAAHK*CYDKSYFDDCI
Trigger: TATGCAGTCATCAAAATAGCTTTTGTCATAACATCACTTGTGTGCTGCTATTTGTCTCATAAGTAATCTGTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684438.1