RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FLRT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000126500

Ensembl transcript IDs: ENST00000246841.3, ENST00000682287.1

Found 321 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGTCGCCAGCGAGTGGCCAGTGGCGGGAGAGCTGCGTGGGAGCTTTaGGAGCCGGCTGCTTCTCCCTGGCGGTTCCTTTGTGATGGCCTT +
Preference number: 1 (lower is better)
Translates to: GRQRVASGGRAAWEL*EPAASPWRFLCDGL
Trigger: AAGGCCATCACAAAGGAACCGCCAGGGAGAAGCAGCCGGCTCTCAAAGCTCCCACGCAGCTCTCCCGCCACTGGCCACTCGCTGGCGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
3UTR GCA 90 bp AAACCTTCCATCGGGTCGCCAGCGAGTGGCCAGTGGCGGGAGAGCTaGGTGGGAGCTTTGAGAGCCGGCTGCTTCTCCCTGGCGGTTCCT +
Preference number: 1 (lower is better)
Translates to: KPSIGSPASGQWRES*VGALRAGCFSLAVP
Trigger: AGGAACCGCCAGGGAGAAGCAGCCGGCTCTCAAAGCTCCCACGCAGCTCTCCCGCCACTGGCCACTCGCTGGCGACCCGATGGAAGGTTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
3UTR CCA 90 bp TCCTTTGTGAGGAGCCTGAAAACCTTCCATCGGGTCGCCAGCGAGTaGCCAGTGGCGGGAGAGCTGCGTGGGAGCTTTGAGAGCCGGCTG +
Preference number: 1 (lower is better)
Translates to: SFVRSLKTFHRVASE*PVAGELRGSFESRL
Trigger: CAGCCGGCTCTCAAAGCTCCCACGCAGCTCTCCCGCCACTGGCCACTCGCTGGCGACCCGATGGAAGGTTTTCAGGCTCCTCACAAAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
3UTR CCA 90 bp AGACACCGCGACAGGGATAGACAGGCAGACAGATGCACCTCCAGGTaGCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACGGAGCGTG +
Preference number: 1 (lower is better)
Translates to: RHRDRDRQADRCTSR*QGKLRLPPGLLRSV
Trigger: CACGCTCCGTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGCCACCTGGAGGTGCATCTGTCTGCCTGTCTATCCCTGTCGCGGTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
3UTR GCA 90 bp GGAGGAAAGTCACCCATGGAATTTCTCTTCCTTGCTCTCTTGGATTaGAGCAGGCTGGGCAAAGCCACATGGCCACGCCAGGGCAGCTGG +
Preference number: 1 (lower is better)
Translates to: GGKSPMEFLFLALLD*SRLGKATWPRQGSW
Trigger: CCAGCTGCCCTGGCGTGGCCATGTGGCTTTGCCCAGCCTGCTGCAATCCAAGAGAGCAAGGAAGAGAAATTCCATGGGTGACTTTCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
3UTR CCA 90 bp TCTGCGGAGGAAAGTCACCCATGGAATTTCTCTTCCTTGCTCTCTTaGATTGCAGCAGGCTGGGCAAAGCCACATGGCCACGCCAGGGCA +
Preference number: 1 (lower is better)
Translates to: SAEESHPWNFSSLLS*IAAGWAKPHGHARA
Trigger: TGCCCTGGCGTGGCCATGTGGCTTTGCCCAGCCTGCTGCAATCCAAGAGAGCAAGGAAGAGAAATTCCATGGGTGACTTTCCTCCGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
3UTR TCA 90 bp CTGCTTCTCCCTGGCGGTTCCTTTGTGATGGCCTTGAACAGAGCATaGGGTGTCCACAGATGTTGTACAGGTAGTATCCTTCCAGTTCAG +
Preference number: 1 (lower is better)
Translates to: LLLPGGSFVMALNRA*GVHRCCTGSILPVQ
Trigger: CTGAACTGGAAGGATACTACCTGTACAACATCTGTGGACACCTCATGCTCTGTTCAAGGCCATCACAAAGGAACCGCCAGGGAGAAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
3UTR GCA 90 bp TGTTGTGTTCTACAAAATCGTCAGCCCTCCCCAAACTTTGCTTTCTaGGGAGGAAAGTCACCCATGGAATTTCTCTTCCTTGCTCTCTTG +
Preference number: 1 (lower is better)
Translates to: CCVLQNRQPSPNFAF*GGKSPMEFLFLALL
Trigger: CAAGAGAGCAAGGAAGAGAAATTCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTTTGTAGAACACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246841.3
3UTR GCA 90 bp TTGTCACTGTTGTGTTCTACAAAATCGTCAGCCCTCCCCAAACTTTaGTTTCTGCGGAGGAAAGTCACCCATGGAATTTCTCTTCCTTGC +
Preference number: 1 (lower is better)
Translates to: LSLLCSTKSSALPKL*FLRRKVTHGISLPC
Trigger: GCAAGGAAGAGAAATTCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTTTGTAGAACACAACAGTGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246841.3
3UTR CCA 90 bp GAATGCAGTGAAAGATGCCATGTTTCTGCAAATCTGCAAGGGAAATaGTATGGAATAAGCCAGGGGAGAGATTTCAGGACCATATCTCCA +
Preference number: 1 (lower is better)
Translates to: ECSERCHVSANLQGK*YGISQGRDFRTISP
Trigger: TGGAGATATGGTCCTGAAATCTCTCCCCTGGCTTATTCCATACCATTTCCCTTGCAGATTTGCAGAAACATGGCATCTTTCACTGCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
3UTR-3UTR CCA 90 bp GGAGAGCTGCGTGGGAGCTTTGAGAGCCGGCTGCTTCTCCCTGGCGGTTCCTTTCTGGGCAAAGCCACATaGCCACGCCAGGGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: GELRGSFESRLLLPGGSFLGKAT*PRQGSW
Trigger: CCAGCTGCCCTGGCGTGGCCATGTGGCTTTGCCCAG...AAAGGAACCGCCAGGGAGAAGCAGCCGGCTCTCAAAGCTCCCACGCAGCTCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
3UTR-3UTR GCA 90 bp ACAGATGCACCTCCAGGTGGCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACCTTGCTCTCTTGGATTaGAGCAGGCTGGGCAAAGCC +
Preference number: 2 (lower is better)
Translates to: TDAPPGGRESYGFRRGFYLALLD*SRLGKA
Trigger: GGCTTTGCCCAGCCTGCTGCAATCCAAGAGAGCAAG...GTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGCCACCTGGAGGTGCATCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
3UTR-3UTR CCA 90 bp ACAGATGCACCTCCAGGTGGCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACTCTTCCTTGCTCTCTTaGATTGCAGCAGGCTGGGCA +
Preference number: 2 (lower is better)
Translates to: TDAPPGGRESYGFRRGFYSSLLS*IAAGWA
Trigger: TGCCCAGCCTGCTGCAATCCAAGAGAGCAAGGAAGA...GTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGCCACCTGGAGGTGCATCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
3UTR CAA 90 bp CGGAGGAAAGTCACCCATGGAATTTCTCTTCCTTGCTCTCTTGGATaGCAGCAGGCTGGGCAAAGCCACATGGCCACGCCAGGGCAGCTG +
Preference number: 2 (lower is better)
Translates to: RRKVTHGISLPCSLG*QQAGQSHMATPGQL
Trigger: CAGCTGCCCTGGCGTGGCCATGTGGCTTTGCCCAGCCTGCTGCAATCCAAGAGAGCAAGGAAGAGAAATTCCATGGGTGACTTTCCTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
3UTR-3UTR GCA 90 bp AAGGACCGTGCATGTGGCTCTATCTACCCATCTGTACTTAGAGACACCGCGACAGCTTTGAGAGCCGGCTaGTTCTCCCTGGCGGTTCCT +
Preference number: 2 (lower is better)
Translates to: KDRACGSIYPSVLRDTATALRAG*FSLAVP
Trigger: AGGAACCGCCAGGGAGAAGCAGCCGGCTCTCAAAGC...TGTCGCGGTGTCTCTAAGTACAGATGGGTAGATAGAGCCACATGCACGGTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
3UTR-3UTR GCA 90 bp AACGGTAAGGACCGTGCATGTGGCTCTATCTACCCATCTGTACTTAGAGACACCCAGTGGCGGGAGAGCTaGGTGGGAGCTTTGAGAGCC +
Preference number: 2 (lower is better)
Translates to: NGKDRACGSIYPSVLRDTQWRES*VGALRA
Trigger: GGCTCTCAAAGCTCCCACGCAGCTCTCCCGCCACTG...GGTGTCTCTAAGTACAGATGGGTAGATAGAGCCACATGCACGGTCCTTACCGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
3UTR-3UTR CCA 90 bp AAGGACCGTGCATGTGGCTCTATCTACCCATCTGTACTTAGAGACACCGCGACACCGGCTGCTTCTCCCTaGCGGTTCCTTTGTGATGGC +
Preference number: 2 (lower is better)
Translates to: KDRACGSIYPSVLRDTATPAASP*RFLCDG
Trigger: GCCATCACAAAGGAACCGCCAGGGAGAAGCAGCCGG...TGTCGCGGTGTCTCTAAGTACAGATGGGTAGATAGAGCCACATGCACGGTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
3UTR-3UTR GCA 90 bp GGAGAGCTGCGTGGGAGCTTTGAGAGCCGGCTGCTTCTCCCTGGCGGTTCCTTTCAACCCAGCCCTGCCTaGAATATTATTTTTAGTCCT +
Preference number: 2 (lower is better)
Translates to: GELRGSFESRLLLPGGSFQPSPA*NIIFSP
Trigger: AGGACTAAAAATAATATTGCAGGCAGGGCTGGGTTG...AAAGGAACCGCCAGGGAGAAGCAGCCGGCTCTCAAAGCTCCCACGCAGCTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246841.3
3UTR-3UTR CCA 90 bp AAATCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGGATGGATTGCAGCAGGCTaGGCAAAGCCACATGGCCAC +
Preference number: 2 (lower is better)
Translates to: KSSALPKLCFLRRKVTHGWIAAG*AKPHGH
Trigger: GTGGCCATGTGGCTTTGCCCAGCCTGCTGCAATCCA...TCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
3UTR CAA 90 bp ACTTTGCTTTCTGCGGAGGAAAGTCACCCATGGAATTTCTCTTCCTaGCTCTCTTGGATTGCAGCAGGCTGGGCAAAGCCACATGGCCAC +
Preference number: 2 (lower is better)
Translates to: TLLSAEESHPWNFSS*LSWIAAGWAKPHGH
Trigger: GTGGCCATGTGGCTTTGCCCAGCCTGCTGCAATCCAAGAGAGCAAGGAAGAGAAATTCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
3UTR-3UTR GCA 90 bp AAGGACCGTGCATGTGGCTCTATCTACCCATCTGTACTTAGAGACACCGCGACATTCTACGGAGCGTGGTaGATGGAACTGAAGAGGGCT +
Preference number: 2 (lower is better)
Translates to: KDRACGSIYPSVLRDTATFYGAW*MELKRA
Trigger: AGCCCTCTTCAGTTCCATGCACCACGCTCCGTAGAA...TGTCGCGGTGTCTCTAAGTACAGATGGGTAGATAGAGCCACATGCACGGTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
3UTR-3UTR GCA 90 bp GTAAGGACCGTGCATGTGGCTCTATCTACCCATCTGTACTTAGAGACACCGCGACCAAACTTTGCTTTCTaGGGAGGAAAGTCACCCATG +
Preference number: 2 (lower is better)
Translates to: VRTVHVALSTHLYLETPRPNFAF*GGKSPM
Trigger: CATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGG...TCGCGGTGTCTCTAAGTACAGATGGGTAGATAGAGCCACATGCACGGTCCTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
3UTR-3UTR GCA 90 bp GTAAGGACCGTGCATGTGGCTCTATCTACCCATCTGTACTTAGAGACACCGCGAGGAATTTCTCTTCCTTaGTCTCTTGGATTGCAGCAG +
Preference number: 2 (lower is better)
Translates to: VRTVHVALSTHLYLETPRGISLP*SLGLQQ
Trigger: CTGCTGCAATCCAAGAGAGCAAGGAAGAGAAATTCC...TCGCGGTGTCTCTAAGTACAGATGGGTAGATAGAGCCACATGCACGGTCCTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
3UTR-3UTR CCA 90 bp AACGGTAAGGACCGTGCATGTGGCTCTATCTACCCATCTGTACTTAGAGACACCAATCTGCAAGGGAAATaGTATGGAATAAGCCAGGGG +
Preference number: 2 (lower is better)
Translates to: NGKDRACGSIYPSVLRDTNLQGK*YGISQG
Trigger: CCCCTGGCTTATTCCATACCATTTCCCTTGCAGATT...GGTGTCTCTAAGTACAGATGGGTAGATAGAGCCACATGCACGGTCCTTACCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
3UTR-3UTR TCA 90 bp AACGGTAAGGACCGTGCATGTGGCTCTATCTACCCATCTGTACTTAGAGACACCGTTCAAAGAATGCAGTaGAAGATGCCATGTTTCTGC +
Preference number: 2 (lower is better)
Translates to: NGKDRACGSIYPSVLRDTVQRMQ*KMPCFC
Trigger: GCAGAAACATGGCATCTTTCACTGCATTCTTTGAAC...GGTGTCTCTAAGTACAGATGGGTAGATAGAGCCACATGCACGGTCCTTACCGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
3UTR CAA 90 bp ATTGTCACTGTTGTGTTCTACAAAATCGTCAGCCCTCCCCAAACTTaGCTTTCTGCGGAGGAAAGTCACCCATGGAATTTCTCTTCCTTG +
Preference number: 2 (lower is better)
Translates to: IVTVVFYKIVSPPQT*LSAEESHPWNFSSL
Trigger: CAAGGAAGAGAAATTCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTTTGTAGAACACAACAGTGACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246841.3
3UTR GCA 72 bp ATCGGGTCGCCAGCGAGTGGCCAGTGGCGGGAGAGCTaGGTGGGAGCTTTGAGAGCCGGCTGCTTCTCCCTG +
Preference number: 3 (lower is better)
Translates to: IGSPASGQWRES*VGALRAGCFSL
Trigger: CAGGGAGAAGCAGCCGGCTCTCAAAGCTCCCACGCAGCTCTCCCGCCACTGGCCACTCGCTGGCGACCCGAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
3UTR TCA 72 bp CGAGTGGCCAGTGGCGGGAGAGCTGCGTGGGAGCTTTaGGAGCCGGCTGCTTCTCCCTGGCGGTTCCTTTGT +
Preference number: 3 (lower is better)
Translates to: RVASGGRAAWEL*EPAASPWRFLC
Trigger: ACAAAGGAACCGCCAGGGAGAAGCAGCCGGCTCTCAAAGCTCCCACGCAGCTCTCCCGCCACTGGCCACTCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
3UTR-3UTR CAA 90 bp GCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACGGAGCGTGGTGCATGGAACAGCTGCGTGGGAGCTTaGAGAGCCGGCTGCTTCTCC +
Preference number: 3 (lower is better)
Translates to: AGKATASAGASTERGAWNSCVGA*RAGCFS
Trigger: GGAGAAGCAGCCGGCTCTCAAAGCTCCCACGCAGCT...GTTCCATGCACCACGCTCCGTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
3UTR CCA 72 bp AGGAGCCTGAAAACCTTCCATCGGGTCGCCAGCGAGTaGCCAGTGGCGGGAGAGCTGCGTGGGAGCTTTGAG +
Preference number: 3 (lower is better)
Translates to: RSLKTFHRVASE*PVAGELRGSFE
Trigger: CTCAAAGCTCCCACGCAGCTCTCCCGCCACTGGCCACTCGCTGGCGACCCGATGGAAGGTTTTCAGGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
3UTR-3UTR CAA 90 bp GCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACGGAGCGTGGTGCATGGAACAGCCCTCCCCAAACTTaGCTTTCTGCGGAGGAAAGT +
Preference number: 3 (lower is better)
Translates to: AGKATASAGASTERGAWNSPPQT*LSAEES
Trigger: ACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCT...GTTCCATGCACCACGCTCCGTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246841.3
3UTR TCA 72 bp CCTGGCGGTTCCTTTGTGATGGCCTTGAACAGAGCATaGGGTGTCCACAGATGTTGTACAGGTAGTATCCTT +
Preference number: 3 (lower is better)
Translates to: PGGSFVMALNRA*GVHRCCTGSIL
Trigger: AAGGATACTACCTGTACAACATCTGTGGACACCTCATGCTCTGTTCAAGGCCATCACAAAGGAACCGCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
3UTR GCA 72 bp CTACAAAATCGTCAGCCCTCCCCAAACTTTGCTTTCTaGGGAGGAAAGTCACCCATGGAATTTCTCTTCCTT +
Preference number: 3 (lower is better)
Translates to: LQNRQPSPNFAF*GGKSPMEFLFL
Trigger: AAGGAAGAGAAATTCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTTTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246841.3
3UTR GCA 72 bp TTGTGTTCTACAAAATCGTCAGCCCTCCCCAAACTTTaGTTTCTGCGGAGGAAAGTCACCCATGGAATTTCT +
Preference number: 3 (lower is better)
Translates to: LCSTKSSALPKL*FLRRKVTHGIS
Trigger: AGAAATTCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTTTGTAGAACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp GCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACGGAGCGTGGTGCATGGAACGACCACGGCCGCCCGTaGCTTCACCCAGTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: AGKATASAGASTERGAWNDHGRP*LHPVPQ
Trigger: CTGCGGGACTGGGTGAAGGCACGGGCGGCCGTGGTC...GTTCCATGCACCACGCTCCGTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp CAGATGCACCTCCAGGTGGCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACGCAGTGGCAGTGGGCGTaGTGGTGGCAGTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: QMHLQVAGKATASAGASTQWQWA*WWQWRW
Trigger: CCACCGCCACTGCCACCACCACGCCCACTGCCACTG...CGTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGCCACCTGGAGGTGCATCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp CGGGAGAGCTGCGTGGGAGCTTTGAGAGCCGGCTGCTTCTCCCTGGCGGTTCCTACCTTCTCAGGGCCCTaGCACATGAGGCCCCGCACG +
Preference number: 4 (lower is better)
Translates to: RESCVGALRAGCFSLAVPTFSGP*HMRPRT
Trigger: CGTGCGGGGCCTCATGTGCCAGGGCCCTGAGAAGGT...AGGAACCGCCAGGGAGAAGCAGCCGGCTCTCAAAGCTCCCACGCAGCTCTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp CTCTCTTGGATTGCAGCAGGCTGGGCAAAGCCACATGGCCACGCCAGGGCAGCTGCGGGGCAGCCCGGGTaGGCGGGCATCATGTGTAGG +
Preference number: 4 (lower is better)
Translates to: LSWIAAGWAKPHGHARAAAGQPG*AGIMCR
Trigger: CCTACACATGATGCCCGCCCACCCGGGCTGCCCCGC...AGCTGCCCTGGCGTGGCCATGTGGCTTTGCCCAGCCTGCTGCAATCCAAGAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp AGGTGGCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACGGAGCGTGGTGCATCCAGCGAGTGGCCAGTaGCGGGAGAGCTGCGTGGGA +
Preference number: 4 (lower is better)
Translates to: RWQGKLRLPPGLLRSVVHPASGQ*RESCVG
Trigger: TCCCACGCAGCTCTCCCGCCACTGGCCACTCGCTGG...ATGCACCACGCTCCGTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGCCACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR TCA 90 bp CTCTCTTGGATTGCAGCAGGCTGGGCAAAGCCACATGGCCACGCCAGGGCAGCTCCAGGCGCAGCCAACTaGGCCGGAAAGAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: LSWIAAGWAKPHGHARAAPGAAN*AGKRRR
Trigger: CCGCCTCCTCTTTCCGGCTCAGTTGGCTGCGCCTGG...AGCTGCCCTGGCGTGGCCATGTGGCTTTGCCCAGCCTGCTGCAATCCAAGAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp CAGATGCACCTCCAGGTGGCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACGTGGTCCGGAGGCCCCTaGCAAAGTCACGAAGCCGCG +
Preference number: 4 (lower is better)
Translates to: QMHLQVAGKATASAGASTWSGGP*QSHEAA
Trigger: CGCGGCTTCGTGACTTTGGCAGGGGCCTCCGGACCA...CGTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGCCACCTGGAGGTGCATCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp CGGGAGAGCTGCGTGGGAGCTTTGAGAGCCGGCTGCTTCTCCCTGGCGGTTCCTCGGCCCCACCTGGCCTaGAGCCTGAATACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: RESCVGALRAGCFSLAVPRPHLA*SLNTSF
Trigger: GAAGGAGGTATTCAGGCTCCAGGCCAGGTGGGGCCG...AGGAACCGCCAGGGAGAAGCAGCCGGCTCTCAAAGCTCCCACGCAGCTCTCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp CGGGAGAGCTGCGTGGGAGCTTTGAGAGCCGGCTGCTTCTCCCTGGCGGTTCCTTTCCTGAGCAGCAGCTaGGCCAGGTTCCCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: RESCVGALRAGCFSLAVPFLSSS*ARFPRS
Trigger: CGACCTGGGGAACCTGGCCCAGCTGCTGCTCAGGAA...AGGAACCGCCAGGGAGAAGCAGCCGGCTCTCAAAGCTCCCACGCAGCTCTCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp AGGTGGCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACGGAGCGTGGTGCATGGGGAGGCGCAGCCCTaGCCTTTTGGCCTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: RWQGKLRLPPGLLRSVVHGEAQP*PFGLEG
Trigger: ACCCTCAAGGCCAAAAGGCCAGGGCTGCGCCTCCCC...ATGCACCACGCTCCGTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGCCACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR TCA 90 bp CTCTCTTGGATTGCAGCAGGCTGGGCAAAGCCACATGGCCACGCCAGGGCAGCTGCCCGCCACCTCTTCTaGAGGGCCTCTGCGTGGCTT +
Preference number: 4 (lower is better)
Translates to: LSWIAAGWAKPHGHARAAARHLF*RASAWL
Trigger: AAGCCACGCAGAGGCCCTTCAGAAGAGGTGGCGGGC...AGCTGCCCTGGCGTGGCCATGTGGCTTTGCCCAGCCTGCTGCAATCCAAGAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR TCA 90 bp CGGGAGAGCTGCGTGGGAGCTTTGAGAGCCGGCTGCTTCTCCCTGGCGGTTCCTAAGACCCTCTGGGTTTaGCTGGGGTCACTGGTCCGG +
Preference number: 4 (lower is better)
Translates to: RESCVGALRAGCFSLAVPKTLWV*LGSLVR
Trigger: CCGGACCAGTGACCCCAGTCAAACCCAGAGGGTCTT...AGGAACCGCCAGGGAGAAGCAGCCGGCTCTCAAAGCTCCCACGCAGCTCTCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR TCA 90 bp CGGGAGAGCTGCGTGGGAGCTTTGAGAGCCGGCTGCTTCTCCCTGGCGGTTCCTGGTCGTTGCAGTAGATaGAGCCGTTGTCGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: RESCVGALRAGCFSLAVPGRCSR*SRCRSG
Trigger: GCCGCTGCGACAACGGCTTCATCTACTGCAACGACC...AGGAACCGCCAGGGAGAAGCAGCCGGCTCTCAAAGCTCCCACGCAGCTCTCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp CAGATGCACCTCCAGGTGGCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACGTGGCAGAGGCGTGGTTaGTGGCCGTGGTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: QMHLQVAGKATASAGASTWQRRG*WPWSWQ
Trigger: CTGCCAAGACCACGGCCAGCAACCACGCCTCTGCCA...CGTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGCCACCTGGAGGTGCATCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp CGGGAGAGCTGCGTGGGAGCTTTGAGAGCCGGCTGCTTCTCCCTGGCGGTTCCTTGGTGTGTGTGGCCTTaGAGAGGCTGCTGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: RESCVGALRAGCFSLAVPWCVWP*RGCCRW
Trigger: CCAACGGCAGCAGCCTCTGCAAGGCCACACACACCA...AGGAACCGCCAGGGAGAAGCAGCCGGCTCTCAAAGCTCCCACGCAGCTCTCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp CAGATGCACCTCCAGGTGGCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACGCAGTGGCGGGAGAGCTaGGTGGGAGCTTTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: QMHLQVAGKATASAGASTQWRES*VGALRA
Trigger: GGCTCTCAAAGCTCCCACGCAGCTCTCCCGCCACTG...CGTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGCCACCTGGAGGTGCATCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp CAGATGCACCTCCAGGTGGCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACGGGTCCATGGTGGCCGTaGTCATCACAACGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: QMHLQVAGKATASAGASTGPWWP*SSQRWP
Trigger: CGGCCACCGTTGTGATGACCACGGCCACCATGGACC...CGTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGCCACCTGGAGGTGCATCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp CTGAAAACCTTCCATCGGGTCGCCAGCGAGTGGCCAGTGGCGGGAGAGCTGCGTCCCGCAGGTCCATGGTaGCCGTGGTCATCACAACGG +
Preference number: 4 (lower is better)
Translates to: LKTFHRVASEWPVAGELRPAGPW*PWSSQR
Trigger: CCGTTGTGATGACCACGGCCACCATGGACCTGCGGG...ACGCAGCTCTCCCGCCACTGGCCACTCGCTGGCGACCCGATGGAAGGTTTTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp GCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACGGAGCGTGGTGCATGGAACCGGCGATGCGCTGGTTaGCCAGCAGGTTACCGTCCA +
Preference number: 4 (lower is better)
Translates to: AGKATASAGASTERGAWNRRCAG*PAGYRP
Trigger: TGGACGGTAACCTGCTGGCCAACCAGCGCATCGCCG...GTTCCATGCACCACGCTCCGTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp CTGAAAACCTTCCATCGGGTCGCCAGCGAGTGGCCAGTGGCGGGAGAGCTGCGTGTAAACAGGGAACCCTaGGGCGTGGTGGCAGAGGCG +
Preference number: 4 (lower is better)
Translates to: LKTFHRVASEWPVAGELRVNREP*GVVAEA
Trigger: CGCCTCTGCCACCACGCCCCAGGGTTCCCTGTTTAC...ACGCAGCTCTCCCGCCACTGGCCACTCGCTGGCGACCCGATGGAAGGTTTTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp AGACAGATGCACCTCCAGGTGGCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTGGATGGCCAGGGTCTTaGCGCCATCACCCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: RQMHLQVAGKATASAGASGWPGS*RHHPWP
Trigger: TGGCCACGGGTGATGGCGCCAAGACCCTGGCCATCC...AGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGCCACCTGGAGGTGCATCTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR TCA 90 bp GGAGAGCTGCGTGGGAGCTTTGAGAGCCGGCTGCTTCTCCCTGGCGGTTCCTTTCTGCGGGGATGGATGTaGGTCCCCGGTCGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: GELRGSFESRLLLPGGSFLRGWM*VPGRCS
Trigger: ACTGCAACGACCGGGGACTCACATCCATCCCCGCAG...AAAGGAACCGCCAGGGAGAAGCAGCCGGCTCTCAAAGCTCCCACGCAGCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp CTGAAAACCTTCCATCGGGTCGCCAGCGAGTGGCCAGTGGCGGGAGAGCTGCGTTGGCCTTGCAGAGGCTaGTGCCGTTGGAGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: LKTFHRVASEWPVAGELRWPCRG*CRWRGR
Trigger: TCTTCCCCTCCAACGGCAGCAGCCTCTGCAAGGCCA...ACGCAGCTCTCCCGCCACTGGCCACTCGCTGGCGACCCGATGGAAGGTTTTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp GCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACGGAGCGTGGTGCATGGAACGCTTTGAGAGCCGGCTaGTTCTCCCTGGCGGTTCCT +
Preference number: 4 (lower is better)
Translates to: AGKATASAGASTERGAWNALRAG*FSLAVP
Trigger: AGGAACCGCCAGGGAGAAGCAGCCGGCTCTCAAAGC...GTTCCATGCACCACGCTCCGTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp AGACAGATGCACCTCCAGGTGGCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTCGTGGTTGCTGGCCGTaGTCTTGGCAGCCGCATTGG +
Preference number: 4 (lower is better)
Translates to: RQMHLQVAGKATASAGASRGCWP*SWQPHW
Trigger: CCAATGCGGCTGCCAAGACCACGGCCAGCAACCACG...AGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGCCACCTGGAGGTGCATCTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp CTCTCTTGGATTGCAGCAGGCTGGGCAAAGCCACATGGCCACGCCAGGGCAGCTGGGCCTTCACGTGGATaGCCAGGGTCTTGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: LSWIAAGWAKPHGHARAAGPSRG*PGSWRH
Trigger: ATGGCGCCAAGACCCTGGCCATCCACGTGAAGGCCC...AGCTGCCCTGGCGTGGCCATGTGGCTTTGCCCAGCCTGCTGCAATCCAAGAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp GCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACGGAGCGTGGTGCATGGAACCCGGCTGCTTCTCCCTaGCGGTTCCTTTGTGATGGC +
Preference number: 4 (lower is better)
Translates to: AGKATASAGASTERGAWNPAASP*RFLCDG
Trigger: GCCATCACAAAGGAACCGCCAGGGAGAAGCAGCCGG...GTTCCATGCACCACGCTCCGTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR TCA 90 bp CTCTCTTGGATTGCAGCAGGCTGGGCAAAGCCACATGGCCACGCCAGGGCAGCTACCAAGGGTTGTTCCTaGGCAGCAGCTGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LSWIAAGWAKPHGHARAATKGCS*AAAGPG
Trigger: ACCTGGCCCAGCTGCTGCTCAGGAACAACCCTTGGT...AGCTGCCCTGGCGTGGCCATGTGGCTTTGCCCAGCCTGCTGCAATCCAAGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp ACAGATGCACCTCCAGGTGGCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACGAGCAGGGTGGCCTCTaGTGCTTGCTACCTCCACAG +
Preference number: 4 (lower is better)
Translates to: TDAPPGGRESYGFRRGFYEQGGL*CLLPPQ
Trigger: CTGTGGAGGTAGCAAGCAGCAGAGGCCACCCTGCTC...GTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGCCACCTGGAGGTGCATCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp ACAGATGCACCTCCAGGTGGCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACCTTGGCACCCTAGGCTaGAGGCGCAGCTGGCTTATC +
Preference number: 4 (lower is better)
Translates to: TDAPPGGRESYGFRRGFYLGTLG*RRSWLI
Trigger: GATAAGCCAGCTGCGCCTGCAGCCTAGGGTGCCAAG...GTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGCCACCTGGAGGTGCATCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp CTCTCTTGGATTGCAGCAGGCTGGGCAAAGCCACATGGCCACGCCAGGGCAGCTAGAGAGGGGATCCGGTaGCTCGGTATCCTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: LSWIAAGWAKPHGHARAAREGIR*LGILVS
Trigger: GGAGACCAGGATACCGAGGCACCGGATCCCCTCTCT...AGCTGCCCTGGCGTGGCCATGTGGCTTTGCCCAGCCTGCTGCAATCCAAGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp CTCTCTTGGATTGCAGCAGGCTGGGCAAAGCCACATGGCCACGCCAGGGCAGCTGCTGTCGGCTGTCTCTaGCTTGGCACACACGGGTGT +
Preference number: 4 (lower is better)
Translates to: LSWIAAGWAKPHGHARAAAVGCL*LGTHGC
Trigger: ACACCCGTGTGTGCCAAGGCAGAGACAGCCGACAGC...AGCTGCCCTGGCGTGGCCATGTGGCTTTGCCCAGCCTGCTGCAATCCAAGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp GCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACGGAGCGTGGTGCATGGAACAGACAGGCAGACAGATaGACCTCCAGGTGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: AGKATASAGASTERGAWNRQADR*TSRWQG
Trigger: TCCCTGCCACCTGGAGGTGCATCTGTCTGCCTGTCT...GTTCCATGCACCACGCTCCGTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp CAGATGCACCTCCAGGTGGCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACGGGTGCCTCGGTATCCTaGTCTCCTGGCGTTCAGATG +
Preference number: 4 (lower is better)
Translates to: QMHLQVAGKATASAGASTGASVS*SPGVQM
Trigger: CATCTGAACGCCAGGAGACCAGGATACCGAGGCACC...CGTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGCCACCTGGAGGTGCATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp CTGAAAACCTTCCATCGGGTCGCCAGCGAGTGGCCAGTGGCGGGAGAGCTGCGTTTGGTCTTGAGGTCCTaGGGGATGCCGGCGTTGTTG +
Preference number: 4 (lower is better)
Translates to: LKTFHRVASEWPVAGELRLVLRS*GMPALL
Trigger: CAACAACGCCGGCATCCCCCAGGACCTCAAGACCAA...ACGCAGCTCTCCCGCCACTGGCCACTCGCTGGCGACCCGATGGAAGGTTTTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp ACAGATGCACCTCCAGGTGGCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACGGGCCAGCGAGTCCCTaGCAATGGTGCGCACATTGT +
Preference number: 4 (lower is better)
Translates to: TDAPPGGRESYGFRRGFYGPASP*QWCAHC
Trigger: ACAATGTGCGCACCATTGCCAGGGACTCGCTGGCCC...GTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGCCACCTGGAGGTGCATCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp CTCTCTTGGATTGCAGCAGGCTGGGCAAAGCCACATGGCCACGCCAGGGCAGCTGCACGTACCAGCAGATaGCCCCCAGGACCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LSWIAAGWAKPHGHARAAARTSR*PPGPGR
Trigger: TCTTCCTGGTCCTGGGGGCCATCTGCTGGTACGTGC...AGCTGCCCTGGCGTGGCCATGTGGCTTTGCCCAGCCTGCTGCAATCCAAGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp CGGGAGAGCTGCGTGGGAGCTTTGAGAGCCGGCTGCTTCTCCCTGGCGGTTCCTGGCTTCTACGGAGCGTaGTGCATGGAACTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: RESCVGALRAGCFSLAVPGFYGA*CMELKR
Trigger: CCTCTTCAGTTCCATGCACCACGCTCCGTAGAAGCC...AGGAACCGCCAGGGAGAAGCAGCCGGCTCTCAAAGCTCCCACGCAGCTCTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR TCA 90 bp TACAAAATCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCACCACTGCCCCGCCGATaGTGCCCGCCAGGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: YKIVSPPQTLLSAEESHPPLPRR*CPPGAG
Trigger: GCCTGCCCCTGGCGGGCATCATCGGCGGGGCAGTGG...TGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTTTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp CAGATGCACCTCCAGGTGGCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACGTCTTGCCCTTTTGTCTaGAGCCCGCCACCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: QMHLQVAGKATASAGASTSCPFV*SPPPLL
Trigger: CAGAAGAGGTGGCGGGCTGCAGACAAAAGGGCAAGA...CGTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGCCACCTGGAGGTGCATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp GGAGAGCTGCGTGGGAGCTTTGAGAGCCGGCTGCTTCTCCCTGGCGGTTCCTTTGAGTTGTCATCCAGGTaGAGCTTCTCCAGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: GELRGSFESRLLLPGGSFELSSR*SFSSSG
Trigger: CCCGCTGCTGGAGAAGCTGCACCTGGATGACAACTC...AAAGGAACCGCCAGGGAGAAGCAGCCGGCTCTCAAAGCTCCCACGCAGCTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp CTGAAAACCTTCCATCGGGTCGCCAGCGAGTGGCCAGTGGCGGGAGAGCTGCGTAGTCATCCTTTTTCCTaGTGCCCCGGTTGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: LKTFHRVASEWPVAGELRSHPFS*CPGCRP
Trigger: GGGCCTACAACCGGGGCAGCAGGAAAAAGGATGACT...ACGCAGCTCTCCCGCCACTGGCCACTCGCTGGCGACCCGATGGAAGGTTTTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp AGACAGATGCACCTCCAGGTGGCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTAGTCCCGCAGGTCCATaGTGGCCGTGGTCATCACAA +
Preference number: 4 (lower is better)
Translates to: RQMHLQVAGKATASAGASSPAGP*WPWSSQ
Trigger: TTGTGATGACCACGGCCACCATGGACCTGCGGGACT...AGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGCCACCTGGAGGTGCATCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp AGACAGATGCACCTCCAGGTGGCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTTGGCGCCATCACCCGTaGCCATGGGGTAGTCAATGT +
Preference number: 4 (lower is better)
Translates to: RQMHLQVAGKATASAGASWRHHP*PWGSQC
Trigger: ACATTGACTACCCCATGGCCACGGGTGATGGCGCCA...AGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGCCACCTGGAGGTGCATCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp CTCTCTTGGATTGCAGCAGGCTGGGCAAAGCCACATGGCCACGCCAGGGCAGCTAGCCAATGGTGTGTGTaGCCTTGCAGAGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LSWIAAGWAKPHGHARAASQWCV*PCRGCC
Trigger: GCAGCAGCCTCTGCAAGGCCACACACACCATTGGCT...AGCTGCCCTGGCGTGGCCATGTGGCTTTGCCCAGCCTGCTGCAATCCAAGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp AGACAGATGCACCTCCAGGTGGCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTTGGATTGCAGCAGGCTaGGCAAAGCCACATGGCCAC +
Preference number: 4 (lower is better)
Translates to: RQMHLQVAGKATASAGASWIAAG*AKPHGH
Trigger: GTGGCCATGTGGCTTTGCCCAGCCTGCTGCAATCCA...AGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGCCACCTGGAGGTGCATCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR TCA 90 bp ACAGATGCACCTCCAGGTGGCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACGGATGCCGGCGTTGTTaGTCTGGTTGTTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: TDAPPGGRESYGFRRGFYGCRRC*SGCSAG
Trigger: ACCTGCAGAACAACCAGATCAACAACGCCGGCATCC...GTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGCCACCTGGAGGTGCATCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR TCA 90 bp GGAGAGCTGCGTGGGAGCTTTGAGAGCCGGCTGCTTCTCCCTGGCGGTTCCTTTTCAGGAAGAGCAGCTTaGGCTGTTTGCTGTCGGCGA +
Preference number: 4 (lower is better)
Translates to: GELRGSFESRLLLPGGSFSGRAA*AVCCRR
Trigger: TCGCCGACAGCAAACAGCTCAAGCTGCTCTTCCTGA...AAAGGAACCGCCAGGGAGAAGCAGCCGGCTCTCAAAGCTCCCACGCAGCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR TCA 90 bp AGACAGATGCACCTCCAGGTGGCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTTGTAGGGGATGTGGCTaGTGGCATTGTCCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: RQMHLQVAGKATASAGASCRGCG*WHCPAG
Trigger: ACCTGCAGGACAATGCCATCAGCCACATCCCCTACA...AGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGCCACCTGGAGGTGCATCTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp AGGTGGCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACGGAGCGTGGTGCATGCCCTTTTCAACTCTTaGCCTTTTGTCTGCAGCCCG +
Preference number: 4 (lower is better)
Translates to: RWQGKLRLPPGLLRSVVHALFNS*PFVCSP
Trigger: CGGGCTGCAGACAAAAGGGCAAGAGTTGAAAAGGGC...ATGCACCACGCTCCGTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp ACAGATGCACCTCCAGGTGGCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACCAGCTGGCTTATCCCTaGAGAGTGAGGGTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: TDAPPGGRESYGFRRGFYQLAYP*RVRVLC
Trigger: ACACAGGACCCTCACTCTGCAGGGATAAGCCAGCTG...GTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGCCACCTGGAGGTGCATCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp CTCTCTTGGATTGCAGCAGGCTGGGCAAAGCCACATGGCCACGCCAGGGCAGCTCATCCTTTTTCCTGCTaGCCCGGTTGTAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: LSWIAAGWAKPHGHARAAHPFSC*PGCRPS
Trigger: AGAGGGCCTACAACCGGGGCAGCAGGAAAAAGGATG...AGCTGCCCTGGCGTGGCCATGTGGCTTTGCCCAGCCTGCTGCAATCCAAGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp GTAAGGACCGTGCATGTGGCTCTATCTACCCATCTGTACTTAGAGACACCGCGACACCACCATGGTGGATaGCTGGGGGCGTCCGGCCCC +
Preference number: 4 (lower is better)
Translates to: VRTVHVALSTHLYLETPRHHHGG*LGASGP
Trigger: GGGGCCGGACGCCCCCAGCCATCCACCATGGTGGTG...TCGCGGTGTCTCTAAGTACAGATGGGTAGATAGAGCCACATGCACGGTCCTTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp CTCTCTTGGATTGCAGCAGGCTGGGCAAAGCCACATGGCCACGCCAGGGCAGCTGCGAGTCCCTGGCAATaGTGCGCACATTGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: LSWIAAGWAKPHGHARAAASPWQ*CAHCCP
Trigger: AGGACAACAATGTGCGCACCATTGCCAGGGACTCGC...AGCTGCCCTGGCGTGGCCATGTGGCTTTGCCCAGCCTGCTGCAATCCAAGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp CTGAAAACCTTCCATCGGGTCGCCAGCGAGTGGCCAGTGGCGGGAGAGCTGCGTTCTTCCTTGCTCTCTTaGATTGCAGCAGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LKTFHRVASEWPVAGELRSSLLS*IAAGWA
Trigger: TGCCCAGCCTGCTGCAATCCAAGAGAGCAAGGAAGA...ACGCAGCTCTCCCGCCACTGGCCACTCGCTGGCGACCCGATGGAAGGTTTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR TCA 90 bp TCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGGAATTGCACCAAGGTCTCCGTaGTGGAGCCCACGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SSALPKLCFLRRKVTHGIAPRSP*WSPRLG
Trigger: GCCCAGCCGTGGGCTCCATCACGGAGACCTTGGTGC...AATTCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp GGAGAGCTGCGTGGGAGCTTTGAGAGCCGGCTGCTTCTCCCTGGCGGTTCCTTTCTTCTGAAGGGCCTCTaGGTGGCTTTTACCCCCTTT +
Preference number: 4 (lower is better)
Translates to: GELRGSFESRLLLPGGSFLLKGL*VAFTPF
Trigger: AAAGGGGGTAAAAGCCACGCAGAGGCCCTTCAGAAG...AAAGGAACCGCCAGGGAGAAGCAGCCGGCTCTCAAAGCTCCCACGCAGCTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp GTAAGGACCGTGCATGTGGCTCTATCTACCCATCTGTACTTAGAGACACCGCGAAGCTCCTCCAGCGTGTaGGGCAGCCCCGAGGGGATG +
Preference number: 4 (lower is better)
Translates to: VRTVHVALSTHLYLETPRSSSSV*GSPEGM
Trigger: CATCCCCTCGGGGCTGCCGCACACGCTGGAGGAGCT...TCGCGGTGTCTCTAAGTACAGATGGGTAGATAGAGCCACATGCACGGTCCTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp CCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGGAATTTCTCTTCCCAGCCCTGGGGTGACTaGGCAGCACTGGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: PPQTLLSAEESHPWNFSSQPWGD*AALGLP
Trigger: GGGGAGCCCCAGTGCTGCCCAGTCACCCCAGGGCTG...GGAAGAGAAATTCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp TCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGGAATTGCGTGGTGGTGGCAGTaGCGGTGGGGTGTGCCACCA +
Preference number: 4 (lower is better)
Translates to: SSALPKLCFLRRKVTHGIAWWWQ*RWGVPP
Trigger: TGGTGGCACACCCCACCGCCACTGCCACCACCACGC...AATTCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp CCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGGAATTTCTCTTCCTCTTGGCAGCCGCATTaGCCACGCCGCCCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: PPQTLLSAEESHPWNFSSSWQPH*PRRPAA
Trigger: GGCCGCAGGGCGGCGTGGCCAATGCGGCTGCCAAGA...GGAAGAGAAATTCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp AAGGACCGTGCATGTGGCTCTATCTACCCATCTGTACTTAGAGACACCGCGACAGGGAACCCTGGGGCGTaGTGGCAGAGGCGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: KDRACGSIYPSVLRDTATGNPGA*WQRRGC
Trigger: GCAACCACGCCTCTGCCACCACGCCCCAGGGTTCCC...TGTCGCGGTGTCTCTAAGTACAGATGGGTAGATAGAGCCACATGCACGGTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp CCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGGAATTTCTCTTCCCGGGTCGCCAGCGAGTaGCCAGTGGCGGGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: PPQTLLSAEESHPWNFSSRVASE*PVAGEL
Trigger: CAGCTCTCCCGCCACTGGCCACTCGCTGGCGACCCG...GGAAGAGAAATTCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR TCA 90 bp AAATCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGGAGCGTGGCCTTCCACGTaGTGCGGATGGAGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: KSSALPKLCFLRRKVTHGAWPST*CGWSLP
Trigger: CGGCAGACTCCATCCGCATCACGTGGAAGGCCACGC...TCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR TCA 90 bp AGACAGATGCACCTCCAGGTGGCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTGCCTTGAACAGAGCATaGGGTGTCCACAGATGTTGT +
Preference number: 4 (lower is better)
Translates to: RQMHLQVAGKATASAGASALNRA*GVHRCC
Trigger: ACAACATCTGTGGACACCTCATGCTCTGTTCAAGGC...AGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGCCACCTGGAGGTGCATCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp AACGGTAAGGACCGTGCATGTGGCTCTATCTACCCATCTGTACTTAGAGACACCTCTCCAGCAGCGGGATaGGGGCCAGCGAGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: NGKDRACGSIYPSVLRDTSPAAG*GPASPW
Trigger: CCAGGGACTCGCTGGCCCGCATCCCGCTGCTGGAGA...GGTGTCTCTAAGTACAGATGGGTAGATAGAGCCACATGCACGGTCCTTACCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp AAGGACCGTGCATGTGGCTCTATCTACCCATCTGTACTTAGAGACACCGCGACACAGGACTCCCGAGGGTaGCCTGAGGGGGTTCCGACT +
Preference number: 4 (lower is better)
Translates to: KDRACGSIYPSVLRDTATQDSRG*PEGVPT
Trigger: AGTCGGAACCCCCTCAGGCCACCCTCGGGAGTCCTG...TGTCGCGGTGTCTCTAAGTACAGATGGGTAGATAGAGCCACATGCACGGTCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp AAGGACCGTGCATGTGGCTCTATCTACCCATCTGTACTTAGAGACACCGCGACAACAGGGACACCCCTCTaGACCCCAGGACTCCCGAGG +
Preference number: 4 (lower is better)
Translates to: KDRACGSIYPSVLRDTATTGTPL*TPGLPR
Trigger: CCTCGGGAGTCCTGGGGTCCAGAGGGGTGTCCCTGT...TGTCGCGGTGTCTCTAAGTACAGATGGGTAGATAGAGCCACATGCACGGTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp CCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGGAATTTCTCTTCCCAGTGGGCGTGGTGGTaGCAGTGGCGGTGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: PPQTLLSAEESHPWNFSSQWAWW*QWRWGV
Trigger: CACACCCCACCGCCACTGCCACCACCACGCCCACTG...GGAAGAGAAATTCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR TCA 90 bp AACGGTAAGGACCGTGCATGTGGCTCTATCTACCCATCTGTACTTAGAGACACCTCACAACGGTGGCCGTaGCAGTGGCAGTGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: NGKDRACGSIYPSVLRDTSQRWP*QWQWAW
Trigger: CCACGCCCACTGCCACTGTCACGGCCACCGTTGTGA...GGTGTCTCTAAGTACAGATGGGTAGATAGAGCCACATGCACGGTCCTTACCGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR TCA 90 bp GAGCATGAGGTGTCCACAGATGTTGTACAGGTAGTATCCTTCCAGTTCAGGGGGGGTTCTGTAGGCGGCTaGAGGTGTCGTCGGCGATGC +
Preference number: 4 (lower is better)
Translates to: EHEVSTDVVQVVSFQFRGGSVGG*RCRRRC
Trigger: GCATCGCCGACGACACCTTCAGCCGCCTACAGAACC...CCCCCTGAACTGGAAGGATACTACCTGTACAACATCTGTGGACACCTCATGCTC
57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR TCA 90 bp CCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGGAATTTCTCTTCCGCTGCGTGGGAGCTTTaGGAGCCGGCTGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PPQTLLSAEESHPWNFSSAAWEL*EPAASP
Trigger: GGGAGAAGCAGCCGGCTCTCAAAGCTCCCACGCAGC...GGAAGAGAAATTCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp AAATCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGGACAGGGTGGCCTCTGCTaGTTGCTACCTCCACAGCCC +
Preference number: 4 (lower is better)
Translates to: KSSALPKLCFLRRKVTHGQGGLC*LLPPQP
Trigger: GGGCTGTGGAGGTAGCAAGCAGCAGAGGCCACCCTG...TCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp CCCAGCCCTGCCTGCAATATTATTTTTAGTCCTTCCCTCCCCAACTGGCATAACGGCGCTCACATTCCCTaGCCCGTGGTCCTACCAGGC +
Preference number: 4 (lower is better)
Translates to: PSPACNIIFSPSLPNWHNGAHIP*PVVLPG
Trigger: GCCTGGTAGGACCACGGGGCAGGGAATGTGAGCGCC...GTTATGCCAGTTGGGGAGGGAAGGACTAAAAATAATATTGCAGGCAGGGCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp GTAAGGACCGTGCATGTGGCTCTATCTACCCATCTGTACTTAGAGACACCGCGATACCTCCTTCGTCGCTaGCGCCCAAGACCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: VRTVHVALSTHLYLETPRYLLRR*RPRPSG
Trigger: CCCAGAGGGTCTTGGGCGGCAGCGACGAAGGAGGTA...TCGCGGTGTCTCTAAGTACAGATGGGTAGATAGAGCCACATGCACGGTCCTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp AAATCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGGAAGGTGTCGTCGGCGATaGGCTGGTTGGCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: KSSALPKLCFLRRKVTHGRCRRR*AGWPAG
Trigger: ACCTGCTGGCCAACCAGCGCATCGCCGACGACACCT...TCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp ACAAAATCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGCGCGGCCAGCGAATTaGGCACCAGCGAGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: TKSSALPKLCFLRRKVTHARPAN*APARAL
Trigger: CAGAGCTCTCGCTGGTGCGCAATTCGCTGGCCGCGC...ATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp CCCAGCCCTGCCTGCAATATTATTTTTAGTCCTTCCCTCCCCAACTGGCATAACGAAGACCAGAGCCACTaGCCCGCCGATGATGCCCGC +
Preference number: 4 (lower is better)
Translates to: PSPACNIIFSPSLPNWHNEDQSH*PADDAR
Trigger: GCGGGCATCATCGGCGGGGCAGTGGCTCTGGTCTTC...GTTATGCCAGTTGGGGAGGGAAGGACTAAAAATAATATTGCAGGCAGGGCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp TCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGGAATTAGCTCGCCAGCCTGGTaGACGTACCAGCAGATGGCC +
Preference number: 4 (lower is better)
Translates to: SSALPKLCFLRRKVTHGISSPAW*TYQQMA
Trigger: GGCCATCTGCTGGTACGTGCACCAGGCTGGCGAGCT...AATTCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp AAGGACCGTGCATGTGGCTCTATCTACCCATCTGTACTTAGAGACACCGCGACAGGTAGCCCCGCGTGGTaGCGTAGCCAATGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: KDRACGSIYPSVLRDTATGSPAW*RSQWCV
Trigger: CACACACCATTGGCTACGGCACCACGCGGGGCTACC...TGTCGCGGTGTCTCTAAGTACAGATGGGTAGATAGAGCCACATGCACGGTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp AGGTGGCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACGGAGCGTGGTGCATGGAATTTCTCTTCCTTaGTCTCTTGGATTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RWQGKLRLPPGLLRSVVHGISLP*SLGLQQ
Trigger: CTGCTGCAATCCAAGAGAGCAAGGAAGAGAAATTCC...ATGCACCACGCTCCGTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp AGACAGATGCACCTCCAGGTGGCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTTCCCGCTTCACTCTCTaGTCTTGTCTGTCCAAAAAG +
Preference number: 4 (lower is better)
Translates to: RQMHLQVAGKATASAGASSRFTL*SCLSKK
Trigger: CTTTTTGGACAGACAAGACCAGAGAGTGAAGCGGGA...AGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGCCACCTGGAGGTGCATCTGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp AAATCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGGACCCTCTGGGTTTGACTaGGGTCACTGGTCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: KSSALPKLCFLRRKVTHGPSGFD*GHWSGG
Trigger: GCCTCCGGACCAGTGACCCCAGTCAAACCCAGAGGG...TCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp GTCACTGTTGTGTTCTACAAAATCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGACCATGGTGGATGGCTaGGGGCGTCCGGCCCCACCT +
Preference number: 4 (lower is better)
Translates to: VTVVFYKIVSPPQTLLSATMVDG*GRPAPP
Trigger: AGGTGGGGCCGGACGCCCCCAGCCATCCACCATGGT...CGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTTTGTAGAACACAACAGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp AACGGTAAGGACCGTGCATGTGGCTCTATCTACCCATCTGTACTTAGAGACACCTGGTGGCAGTGGCGGTaGGGTGTGCCACCACCATGG +
Preference number: 4 (lower is better)
Translates to: NGKDRACGSIYPSVLRDTWWQWR*GVPPPW
Trigger: CCATGGTGGTGGCACACCCCACCGCCACTGCCACCA...GGTGTCTCTAAGTACAGATGGGTAGATAGAGCCACATGCACGGTCCTTACCGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp CCCAGCCCTGCCTGCAATATTATTTTTAGTCCTTCCCTCCCCAACTGGCATAACCAGAGGCGTGGTTGCTaGCCGTGGTCTTGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: PSPACNIIFSPSLPNWHNQRRGC*PWSWQP
Trigger: CGGCTGCCAAGACCACGGCCAGCAACCACGCCTCTG...GTTATGCCAGTTGGGGAGGGAAGGACTAAAAATAATATTGCAGGCAGGGCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp GTCACTGTTGTGTTCTACAAAATCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGGGGGCAGGCTCGCCATaGGGCCAGCGTTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: VTVVFYKIVSPPQTLLSAGAGSP*GQRSAP
Trigger: AGGAGCAGAACGCTGGCCCCATGGCGAGCCTGCCCC...CGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTTTGTAGAACACAACAGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp CGGGAGAGCTGCGTGGGAGCTTTGAGAGCCGGCTGCTTCTCCCTGGCGGTTCCTTGGAGTTATCCTTCTTaGTCCCTGACTCCATATAGT +
Preference number: 4 (lower is better)
Translates to: RESCVGALRAGCFSLAVPWSYPS*SLTPYS
Trigger: ACTATATGGAGTCAGGGACCAAGAAGGATAACTCCA...AGGAACCGCCAGGGAGAAGCAGCCGGCTCTCAAAGCTCCCACGCAGCTCTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR TCA 90 bp GTAAGGACCGTGCATGTGGCTCTATCTACCCATCTGTACTTAGAGACACCGCGACGACTCAGGACACCGTaGGCTCAGATGGCGCTCACA +
Preference number: 4 (lower is better)
Translates to: VRTVHVALSTHLYLETPRRLRTP*AQMALT
Trigger: TGTGAGCGCCATCTGAGCTCACGGTGTCCTGAGTCG...TCGCGGTGTCTCTAAGTACAGATGGGTAGATAGAGCCACATGCACGGTCCTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR TCA 90 bp GAGCATGAGGTGTCCACAGATGTTGTACAGGTAGTATCCTTCCAGTTCAGGGGGCCGTCAGGAAGGCGATaGGCCCGTAGCAGAGGAACA +
Preference number: 4 (lower is better)
Translates to: EHEVSTDVVQVVSFQFRGPSGRR*ARSRGT
Trigger: TGTTCCTCTGCTACGGGCTCATCGCCTTCCTGACGG...CCCCCTGAACTGGAAGGATACTACCTGTACAACATCTGTGGACACCTCATGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR TCA 90 bp GTAAGGACCGTGCATGTGGCTCTATCTACCCATCTGTACTTAGAGACACCGCGAAGGTGGTGCTGTCGATaGCCTCCGTCAGGAAGGCGA +
Preference number: 4 (lower is better)
Translates to: VRTVHVALSTHLYLETPRRWCCR*PPSGRR
Trigger: TCGCCTTCCTGACGGAGGTCATCGACAGCACCACCT...TCGCGGTGTCTCTAAGTACAGATGGGTAGATAGAGCCACATGCACGGTCCTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp GTCACTGTTGTGTTCTACAAAATCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGTTGGCCACGCCGCCCTaGGGCCCCGTCTCAAAACAC +
Preference number: 4 (lower is better)
Translates to: VTVVFYKIVSPPQTLLSALATPP*GPVSKH
Trigger: GTGTTTTGAGACGGGGCCGCAGGGCGGCGTGGCCAA...CGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTTTGTAGAACACAACAGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp CCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGGAATTTCTCTTCCTTGCAGTCTATGTCGGGGATaGCGCCGTCCCGGTAGCCCC +
Preference number: 4 (lower is better)
Translates to: PKLCFLRRKVTHGISLPCSLCRG*RRPGSP
Trigger: GGGGCTACCGGGACGGCGGCATCCCCGACATAGACT...GCAAGGAAGAGAAATTCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp CCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGGAATTTCTCTTCCTTGCGGTGTGCCACCACCATaGTGGATGGCTGGGGGCGTC +
Preference number: 4 (lower is better)
Translates to: PKLCFLRRKVTHGISLPCGVPPP*WMAGGV
Trigger: GACGCCCCCAGCCATCCACCATGGTGGTGGCACACC...GCAAGGAAGAGAAATTCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp CCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGGAATTTCTCTTCCTCGTCGGCGATGCGCTaGTTGGCCAGCAGGTTACCG +
Preference number: 4 (lower is better)
Translates to: PPQTLLSAEESHPWNFSSSSAMR*LASRLP
Trigger: CGGTAACCTGCTGGCCAACCAGCGCATCGCCGACGA...GGAAGAGAAATTCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp GAGCATGAGGTGTCCACAGATGTTGTACAGGTAGTATCCTTCCAGTTCAGGGGGTGGGGTAGTCAATGTTaGAGTCGGGGAGGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: EHEVSTDVVQVVSFQFRGWGSQC*SRGGAA
Trigger: GGCTGCGCCTCCCCGACTCCAACATTGACTACCCCA...CCCCCTGAACTGGAAGGATACTACCTGTACAACATCTGTGGACACCTCATGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp CCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGGAATTTCTCTTCCGTCAGGGCCTTCACGTaGATGGCCAGGGTCTTGGCG +
Preference number: 4 (lower is better)
Translates to: PPQTLLSAEESHPWNFSSVRAFT*MARVLA
Trigger: CGCCAAGACCCTGGCCATCCACGTGAAGGCCCTGAC...GGAAGAGAAATTCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp GTCACTGTTGTGTTCTACAAAATCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGCCCGGTAGCCCCGCGTaGTGCCGTAGCCAATGGTGT +
Preference number: 4 (lower is better)
Translates to: VTVVFYKIVSPPQTLLSAPGSPA*CRSQWC
Trigger: ACACCATTGGCTACGGCACCACGCGGGGCTACCGGG...CGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTTTGTAGAACACAACAGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR TCA 90 bp AACGGTAAGGACCGTGCATGTGGCTCTATCTACCCATCTGTACTTAGAGACACCGCTGACACATGCAGCTaGGCTGTCAGGCCCCCACAT +
Preference number: 4 (lower is better)
Translates to: NGKDRACGSIYPSVLRDTADTCS*AVRPPH
Trigger: ATGTGGGGGCCTGACAGCTCAGCTGCATGTGTCAGC...GGTGTCTCTAAGTACAGATGGGTAGATAGAGCCACATGCACGGTCCTTACCGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR TCA 90 bp AACGGTAAGGACCGTGCATGTGGCTCTATCTACCCATCTGTACTTAGAGACACCACCTGGCCTGGAGCCTaGATACCTCCTTCGTCGCTG +
Preference number: 4 (lower is better)
Translates to: NGKDRACGSIYPSVLRDTTWPGA*IPPSSL
Trigger: CAGCGACGAAGGAGGTATTCAGGCTCCAGGCCAGGT...GGTGTCTCTAAGTACAGATGGGTAGATAGAGCCACATGCACGGTCCTTACCGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR TCA 90 bp TCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGGAATTCGTCCTCCTCAATGCTaGCGGTGGACACGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: SSALPKLCFLRRKVTHGIRPPQC*RWTRSC
Trigger: ACAACTCCGTGTCCACCGTCAGCATTGAGGAGGACG...AATTCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR TCA 90 bp ACAGATGCACCTCCAGGTGGCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACGTTCAAAGAATGCAGTaGAAGATGCCATGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: TDAPPGGRESYGFRRGFYVQRMQ*KMPCFC
Trigger: GCAGAAACATGGCATCTTTCACTGCATTCTTTGAAC...GTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGCCACCTGGAGGTGCATCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp GTAAGGACCGTGCATGTGGCTCTATCTACCCATCTGTACTTAGAGACACCGCGAAGTGAGGGTCCTGTGTaGAAGGGGTACAGGGACACC +
Preference number: 4 (lower is better)
Translates to: VRTVHVALSTHLYLETPRSEGPV*KGYRDT
Trigger: GGTGTCCCTGTACCCCTTGCACACAGGACCCTCACT...TCGCGGTGTCTCTAAGTACAGATGGGTAGATAGAGCCACATGCACGGTCCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp AACGGTAAGGACCGTGCATGTGGCTCTATCTACCCATCTGTACTTAGAGACACCGGTCCTACCAGGCCTTaGACCACTAGGGACGCAGAC +
Preference number: 4 (lower is better)
Translates to: NGKDRACGSIYPSVLRDTGPTRP*TTRDAD
Trigger: GTCTGCGTCCCTAGTGGTGCAAGGCCTGGTAGGACC...GGTGTCTCTAAGTACAGATGGGTAGATAGAGCCACATGCACGGTCCTTACCGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp ACAAAATCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGATGCGGATGGAGTCTaGCGTCAGGGCCTTCACGTG +
Preference number: 4 (lower is better)
Translates to: TKSSALPKLCFLRRKVTHDADGV*RQGLHV
Trigger: CACGTGAAGGCCCTGACGGCAGACTCCATCCGCATC...ATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp AACGGTAAGGACCGTGCATGTGGCTCTATCTACCCATCTGTACTTAGAGACACCTTGATGGGCAGCATCTaGAGCCCAGGGCCGCGGATT +
Preference number: 4 (lower is better)
Translates to: NGKDRACGSIYPSVLRDTLMGSI*SPGPRI
Trigger: AATCCGCGGCCCTGGGCTGCAGATGCTGCCCATCAA...GGTGTCTCTAAGTACAGATGGGTAGATAGAGCCACATGCACGGTCCTTACCGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp CTCTCTTGGATTGCAGCAGGCTGGGCAAAGCCACATGGCCACGCCAGGGCAGCTCAACCCAGCCCTGCCTaGAATATTATTTTTAGTCCT +
Preference number: 4 (lower is better)
Translates to: LSWIAAGWAKPHGHARAAQPSPA*NIIFSP
Trigger: AGGACTAAAAATAATATTGCAGGCAGGGCTGGGTTG...AGCTGCCCTGGCGTGGCCATGTGGCTTTGCCCAGCCTGCTGCAATCCAAGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp CCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGGAATTTCTCTTCCACATTCCCTGCCCCGTaGTCCTACCAGGCCTTGCAC +
Preference number: 4 (lower is better)
Translates to: PPQTLLSAEESHPWNFSSTFPAP*SYQALH
Trigger: GTGCAAGGCCTGGTAGGACCACGGGGCAGGGAATGT...GGAAGAGAAATTCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp CCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGGAATTTCTCTTCCCACCGTGAGCTCAGATaGCGCTCACATTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: PPQTLLSAEESHPWNFSSHRELR*RSHSLP
Trigger: GGGCAGGGAATGTGAGCGCCATCTGAGCTCACGGTG...GGAAGAGAAATTCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp TACAAAATCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCAGGGATGCTGCTCAGGTaGTTCCGGCTCAGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: YKIVSPPQTLLSAEESHPGMLLR*FRLRKS
Trigger: GCTCTTCCTGAGCCGGAACCACCTGAGCAGCATCCC...TGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTTTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp TACAAAATCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCAAGCAGCTCGCCAGCCTaGTGCACGTACCAGCAGATG +
Preference number: 4 (lower is better)
Translates to: YKIVSPPQTLLSAEESHPSSSPA*CTYQQM
Trigger: CATCTGCTGGTACGTGCACCAGGCTGGCGAGCTGCT...TGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTTTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR TCA 90 bp CCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGGAATTTCTCTTCCAGTCCCGCAGCCACATaGGGTTGCAGCCACAAAACC +
Preference number: 4 (lower is better)
Translates to: PPQTLLSAEESHPWNFSSSPAAT*GCSHKT
Trigger: GGTTTTGTGGCTGCAACCTCATGTGGCTGCGGGACT...GGAAGAGAAATTCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR TCA 90 bp CCCAGCCCTGCCTGCAATATTATTTTTAGTCCTTCCCTCCCCAACTGGCATAACCGTGGTGCATGGAACTaGAGAGGGCTTCAGCCTAGG +
Preference number: 4 (lower is better)
Translates to: PSPACNIIFSPSLPNWHNRGAWN*RGLQPR
Trigger: CCTAGGCTGAAGCCCTCTTCAGTTCCATGCACCACG...GTTATGCCAGTTGGGGAGGGAAGGACTAAAAATAATATTGCAGGCAGGGCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp CCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGGAATTTCTCTTCCTTGCGCGGGATGGTGGAGATaGGGTTGTCATCCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: PKLCFLRRKVTHGISLPCAGWWR*GCHPAA
Trigger: TGCGGCTGGATGACAACCGCATCTCCACCATCCCGC...GCAAGGAAGAGAAATTCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp AACGGTAAGGACCGTGCATGTGGCTCTATCTACCCATCTGTACTTAGAGACACCAGGCCCTTGAAGGCATaGAGCGGGATGGTGGAGATG +
Preference number: 4 (lower is better)
Translates to: NGKDRACGSIYPSVLRDTRPLKA*SGMVEM
Trigger: CATCTCCACCATCCCGCTGCATGCCTTCAAGGGCCT...GGTGTCTCTAAGTACAGATGGGTAGATAGAGCCACATGCACGGTCCTTACCGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp TCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGGAATTTCTGTCTTGTCCCCCTaGACCAAGGTCTCCGTGATG +
Preference number: 4 (lower is better)
Translates to: SSALPKLCFLRRKVTHGISVLSP*TKVSVM
Trigger: CATCACGGAGACCTTGGTGCAGGGGGACAAGACAGA...AATTCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp ACAAAATCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATATGGGGCCAGCGTTCTaGTCCTGGTTGAGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: TKSSALPKLCFLRRKVTHMGPAF*SWLSVV
Trigger: CACCACACTCAACCAGGAGCAGAACGCTGGCCCCAT...ATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp GAGCATGAGGTGTCCACAGATGTTGTACAGGTAGTATCCTTCCAGTTCAGGGGGGTTCAGATGAGGCTGTaGGCCACAATCAGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: EHEVSTDVVQVVSFQFRGVQMRL*ATISSL
Trigger: GAGGCTGCTGATTGTGGCCCACAGCCTCATCTGAAC...CCCCCTGAACTGGAAGGATACTACCTGTACAACATCTGTGGACACCTCATGCTC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp ACAAAATCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATCCAGCTCACGCATCTTaGCCAGCGTGTTGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: TKSSALPKLCFLRRKVTHPAHAS*PACCRG
Trigger: TCCCCTACAACACGCTGGCCAAGATGCGTGAGCTGG...ATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR TCA 90 bp GTAAGGACCGTGCATGTGGCTCTATCTACCCATCTGTACTTAGAGACACCGCGAGGTCCATTACCCCGCTaGGGAGTTCAGATGTTCATG +
Preference number: 4 (lower is better)
Translates to: VRTVHVALSTHLYLETPRGPLPR*GVQMFM
Trigger: CATGAACATCTGAACTCCTCAGCGGGGTAATGGACC...TCGCGGTGTCTCTAAGTACAGATGGGTAGATAGAGCCACATGCACGGTCCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp ACAAAATCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATCAAGGGCCTCAGTCCTaGTTGGCTGCTCCTGTTTGT +
Preference number: 4 (lower is better)
Translates to: TKSSALPKLCFLRRKVTHQGPQS*LAAPVC
Trigger: ACAAACAGGAGCAGCCAAGCAGGACTGAGGCCCTTG...ATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp AAGGACCGTGCATGTGGCTCTATCTACCCATCTGTACTTAGAGACACCGCGACAAAGGCTCTGTATTCCTaGCACTCAGGCTGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: KDRACGSIYPSVLRDTATKALYS*HSGCVS
Trigger: GGAGACACAGCCTGAGTGGCAGGAATACAGAGCCTT...TGTCGCGGTGTCTCTAAGTACAGATGGGTAGATAGAGCCACATGCACGGTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp GAGCATGAGGTGTCCACAGATGTTGTACAGGTAGTATCCTTCCAGTTCAGGGGGTGCAGAGAGTGTTCTTaGATGACGGAGCTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: EHEVSTDVVQVVSFQFRGCRECS*MTELRG
Trigger: CCCTCTCAGCTCCGTCATGCAAGAACACTCTCTGCA...CCCCCTGAACTGGAAGGATACTACCTGTACAACATCTGTGGACACCTCATGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp AAATCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGGAAGTCCCTGGCAATGGTaGGCACATTGTTGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: KSSALPKLCFLRRKVTHGSPWQW*AHCCPA
Trigger: TGCAGGACAACAATGTGCGCACCATTGCCAGGGACT...TCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp AAGGACCGTGCATGTGGCTCTATCTACCCATCTGTACTTAGAGACACCGCGACAGCCCTCCCCAAACTTTaGTTTCTGCGGAGGAAAGTC +
Preference number: 4 (lower is better)
Translates to: KDRACGSIYPSVLRDTATALPKL*FLRRKV
Trigger: GACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGC...TGTCGCGGTGTCTCTAAGTACAGATGGGTAGATAGAGCCACATGCACGGTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp AAATCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGGAGCAGGTAGAGGGTGGTaGCATCATCAGGGATATCTG +
Preference number: 4 (lower is better)
Translates to: KSSALPKLCFLRRKVTHGAGRGW*HHQGYL
Trigger: CAGATATCCCTGATGATGCCACCACCCTCTACCTGC...TCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp ACAAAATCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATAGGCATGCAGCGGGATaGTGGAGATGCGGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: TKSSALPKLCFLRRKVTHRHAAG*WRCGCH
Trigger: ATGACAACCGCATCTCCACCATCCCGCTGCATGCCT...ATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp GAGCATGAGGTGTCCACAGATGTTGTACAGGTAGTATCCTTCCAGTTCAGGGGGCATCACCCGTGGCCATaGGGTAGTCAATGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: EHEVSTDVVQVVSFQFRGHHPWP*GSQCWS
Trigger: ACTCCAACATTGACTACCCCATGGCCACGGGTGATG...CCCCCTGAACTGGAAGGATACTACCTGTACAACATCTGTGGACACCTCATGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp ACAAAATCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATTGGTGCCGTAGCCAATaGTGTGTGTGGCCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: TKSSALPKLCFLRRKVTHWCRSQ*CVWPCR
Trigger: TCTGCAAGGCCACACACACCATTGGCTACGGCACCA...ATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp GAGCATGAGGTGTCCACAGATGTTGTACAGGTAGTATCCTTCCAGTTCAGGGGGATCATCAGGGATATCTaGGGGGATGGATGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: EHEVSTDVVQVVSFQFRGIIRDI*GDGCES
Trigger: GGACTCACATCCATCCCCGCAGATATCCCTGATGAT...CCCCCTGAACTGGAAGGATACTACCTGTACAACATCTGTGGACACCTCATGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp GTCACTGTTGTGTTCTACAAAATCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGCTTGCTCTCTTGGATTaGAGCAGGCTGGGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: VTVVFYKIVSPPQTLLSALALLD*SRLGKA
Trigger: GGCTTTGCCCAGCCTGCTGCAATCCAAGAGAGCAAG...CGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTTTGTAGAACACAACAGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp CCCAGCCCTGCCTGCAATATTATTTTTAGTCCTTCCCTCCCCAACTGGCATAACAGTCACTTGGCAGAATaGGCTGGGTGCAGAGAGTGT +
Preference number: 4 (lower is better)
Translates to: PSPACNIIFSPSLPNWHNSHLAE*AGCREC
Trigger: ACACTCTCTGCACCCAGCCCATTCTGCCAAGTGACT...GTTATGCCAGTTGGGGAGGGAAGGACTAAAAATAATATTGCAGGCAGGGCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp GTCACTGTTGTGTTCTACAAAATCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGGGTATCCTGGTCTCCTaGCGTTCAGATGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: VTVVFYKIVSPPQTLLSAGILVS*RSDEAV
Trigger: CACAGCCTCATCTGAACGCCAGGAGACCAGGATACC...CGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTTTGTAGAACACAACAGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp TCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGGAATTTCTGCAGGTAGAGGGTaGTGGCATCATCAGGGATAT +
Preference number: 4 (lower is better)
Translates to: SSALPKLCFLRRKVTHGISAGRG*WHHQGY
Trigger: ATATCCCTGATGATGCCACCACCCTCTACCTGCAGA...AATTCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp CCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGGAATTTCTCTTCCTTGCCATGCAGCGGGATGGTaGAGATGCGGTTGTCATCCA +
Preference number: 4 (lower is better)
Translates to: PKLCFLRRKVTHGISLPCHAAGW*RCGCHP
Trigger: TGGATGACAACCGCATCTCCACCATCCCGCTGCATG...GCAAGGAAGAGAAATTCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp ACTTGGTATAAATTATGTCTTCAACAATGTCGAATTCCCCCTCCTGCCTTCTATGGGCAGGTTGAGGGGTaGCGCGGCCAGCGAATTGCG +
Preference number: 4 (lower is better)
Translates to: TWYKLCLQQCRIPPPAFYGQVEG*RGQRIA
Trigger: CGCAATTCGCTGGCCGCGCCACCCCTCAACCTGCCC...ATAGAAGGCAGGAGGGGGAATTCGACATTGTTGAAGACATAATTTATACCAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp GTCACTGTTGTGTTCTACAAAATCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGTGTCAGGCCCCCACATaGCCTTCTTTGAGAAGATGC +
Preference number: 4 (lower is better)
Translates to: VTVVFYKIVSPPQTLLSACQAPT*PSLRRC
Trigger: GCATCTTCTCAAAGAAGGGCATGTGGGGGCCTGACA...CGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTTTGTAGAACACAACAGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp ACTTGGTATAAATTATGTCTTCAACAATGTCGAATTCCCCCTCCTGCCTTCTATCCTGTTCGTCGGGCATaGCCTGTGGCCTGGCACCCA +
Preference number: 4 (lower is better)
Translates to: TWYKLCLQQCRIPPPAFYPVRRA*PVAWHP
Trigger: TGGGTGCCAGGCCACAGGGCATGCCCGACGAACAGG...ATAGAAGGCAGGAGGGGGAATTCGACATTGTTGAAGACATAATTTATACCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp ACTTGGTATAAATTATGTCTTCAACAATGTCGAATTCCCCCTCCTGCCTTCTATGCCCCGAGGGGATGCTaGTCAGGTGGTTCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: TWYKLCLQQCRIPPPAFYAPRGC*SGGSGS
Trigger: TGAGCCGGAACCACCTGAGCAGCATCCCCTCGGGGC...ATAGAAGGCAGGAGGGGGAATTCGACATTGTTGAAGACATAATTTATACCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp AAATCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGGACCAAACTTTGCTTTCTaGGGAGGAAAGTCACCCATG +
Preference number: 4 (lower is better)
Translates to: KSSALPKLCFLRRKVTHGPNFAF*GGKSPM
Trigger: CATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGG...TCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp ACTTGGTATAAATTATGTCTTCAACAATGTCGAATTCCCCCTCCTGCCTTCTATTGCTGGCCGTGGTCTTaGCAGCCGCATTGGCCACGC +
Preference number: 4 (lower is better)
Translates to: TWYKLCLQQCRIPPPAFYCWPWS*QPHWPR
Trigger: GCGTGGCCAATGCGGCTGCCAAGACCACGGCCAGCA...ATAGAAGGCAGGAGGGGGAATTCGACATTGTTGAAGACATAATTTATACCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp ACTTGGTATAAATTATGTCTTCAACAATGTCGAATTCCCCCTCCTGCCTTCTATAACCCTGGGGCGTGGTaGCAGAGGCGTGGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: TWYKLCLQQCRIPPPAFYNPGAW*QRRGCW
Trigger: CCAGCAACCACGCCTCTGCCACCACGCCCCAGGGTT...ATAGAAGGCAGGAGGGGGAATTCGACATTGTTGAAGACATAATTTATACCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR TCA 90 bp TCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGGAATTATCCTTCTTGGTCCCTaGCTCCATATAGTCATCCTT +
Preference number: 4 (lower is better)
Translates to: SSALPKLCFLRRKVTHGIILLGP*LHIVIL
Trigger: AAGGATGACTATATGGAGTCAGGGACCAAGAAGGAT...AATTCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp ACTTGGTATAAATTATGTCTTCAACAATGTCGAATTCCCCCTCCTGCCTTCTATGTGGTGGCAGAGGCGTaGTTGCTGGCCGTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: TWYKLCLQQCRIPPPAFYVVAEA*LLAVVL
Trigger: CAAGACCACGGCCAGCAACCACGCCTCTGCCACCAC...ATAGAAGGCAGGAGGGGGAATTCGACATTGTTGAAGACATAATTTATACCAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp AACGGTAAGGACCGTGCATGTGGCTCTATCTACCCATCTGTACTTAGAGACACCGAGGGGAAGATAGTGTaGACCACGTACTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: NGKDRACGSIYPSVLRDTEGKIV*TTYSSL
Trigger: CAAAGAAGAGTACGTGGTCCACACTATCTTCCCCTC...GGTGTCTCTAAGTACAGATGGGTAGATAGAGCCACATGCACGGTCCTTACCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp GTAAGGACCGTGCATGTGGCTCTATCTACCCATCTGTACTTAGAGACACCGCGAGAGGAAAGTCACCCATaGAATTTCTCTTCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: VRTVHVALSTHLYLETPREESHP*NFSSLL
Trigger: GAGCAAGGAAGAGAAATTCCATGGGTGACTTTCCTC...TCGCGGTGTCTCTAAGTACAGATGGGTAGATAGAGCCACATGCACGGTCCTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CCA 90 bp GTAAGGACCGTGCATGTGGCTCTATCTACCCATCTGTACTTAGAGACACCGCGAAATCTGCAAGGGAAATaGTATGGAATAAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: VRTVHVALSTHLYLETPRNLQGK*YGISQG
Trigger: CCCCTGGCTTATTCCATACCATTTCCCTTGCAGATT...TCGCGGTGTCTCTAAGTACAGATGGGTAGATAGAGCCACATGCACGGTCCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR TCA 90 bp CCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGGAATTTCTCTTCCTTGCGGAAATGGTAAGAACTaGCCCAAGAAGAACGGTAAG +
Preference number: 4 (lower is better)
Translates to: PKLCFLRRKVTHGISLPCGNGKN*PKKNGK
Trigger: CTTACCGTTCTTCTTGGGTCAGTTCTTACCATTTCC...GCAAGGAAGAGAAATTCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
3UTR CAA 72 bp GTTGTGTTCTACAAAATCGTCAGCCCTCCCCAAACTTaGCTTTCTGCGGAGGAAAGTCACCCATGGAATTTC +
Preference number: 4 (lower is better)
Translates to: VVFYKIVSPPQT*LSAEESHPWNF
Trigger: GAAATTCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTTTGTAGAACACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp ACAAAATCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATATGTTTCTGCAAATCTaGAAGGGAAATGGTATGGAA +
Preference number: 4 (lower is better)
Translates to: TKSSALPKLCFLRRKVTHMFLQI*KGNGME
Trigger: TTCCATACCATTTCCCTTGCAGATTTGCAGAAACAT...ATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR GCA 90 bp ACTTGGTATAAATTATGTCTTCAACAATGTCGAATTCCCCCTCCTGCCTTCTATTTCTACGGAGCGTGGTaGATGGAACTGAAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: TWYKLCLQQCRIPPPAFYFYGAW*MELKRA
Trigger: AGCCCTCTTCAGTTCCATGCACCACGCTCCGTAGAA...ATAGAAGGCAGGAGGGGGAATTCGACATTGTTGAAGACATAATTTATACCAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS CCA 90 bp ACAGGGAACCCTGGGGCGTGGTGGCAGAGGCGTGGTTGCTGGCCGTaGTCTTGGCAGCCGCATTGGCCACGCCGCCCTGCGGCCCCGTCT +
Preference number: 5 (lower is better)
Translates to: TGNPGAWWQRRGCWP*SWQPHWPRRPAAPS
Trigger: AGACGGGGCCGCAGGGCGGCGTGGCCAATGCGGCTGCCAAGACCACGGCCAGCAACCACGCCTCTGCCACCACGCCCCAGGGTTCCCTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CCA 90 bp TCCCCCTGCACCAAGGTCTCCGTGATGGAGCCCACGGCTGGGCTGTaGCCCAGGCGCAGCCAACTGAGCCGGAAAGAGGAGGCGGGGAGC +
Preference number: 5 (lower is better)
Translates to: SPCTKVSVMEPTAGL*PRRSQLSRKEEAGS
Trigger: GCTCCCCGCCTCCTCTTTCCGGCTCAGTTGGCTGCGCCTGGGCCACAGCCCAGCCGTGGGCTCCATCACGGAGACCTTGGTGCAGGGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS TCA 90 bp CTGCGCAGCGGCCGGGGAGGCGGGTCTCCTCGGGAAACTTTGCGGTaGCGGCTGGAGCCTCAGGGGTTATTCCAAGGAGCGGGCGGGAAC +
Preference number: 5 (lower is better)
Translates to: LRSGRGGGSPRETLR*RLEPQGLFQGAGGN
Trigger: GTTCCCGCCCGCTCCTTGGAATAACCCCTGAGGCTCCAGCCGTCACCGCAAAGTTTCCCGAGGAGACCCGCCTCCCCGGCCGCTGCGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682287.1
CDS GCA 90 bp CTCACCTGCGCAGCGGCCGGGGAGGCGGGTCTCCTCGGGAAACTTTaGGGTGACGGCTGGAGCCTCAGGGGTTATTCCAAGGAGCGGGCG +
Preference number: 5 (lower is better)
Translates to: LTCAAAGEAGLLGKL*GDGWSLRGYSKERA
Trigger: CGCCCGCTCCTTGGAATAACCCCTGAGGCTCCAGCCGTCACCGCAAAGTTTCCCGAGGAGACCCGCCTCCCCGGCCGCTGCGCAGGTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682287.1
CDS CCA 90 bp GCCTTGAGGGTAAACAGGGAACCCTGGGGCGTGGTGGCAGAGGCGTaGTTGCTGGCCGTGGTCTTGGCAGCCGCATTGGCCACGCCGCCC +
Preference number: 5 (lower is better)
Translates to: ALRVNREPWGVVAEA*LLAVVLAAALATPP
Trigger: GGGCGGCGTGGCCAATGCGGCTGCCAAGACCACGGCCAGCAACCACGCCTCTGCCACCACGCCCCAGGGTTCCCTGTTTACCCTCAAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CCA 90 bp GCGGCCGGGGAGGCGGGTCTCCTCGGGAAACTTTGCGGTGACGGCTaGAGCCTCAGGGGTTATTCCAAGGAGCGGGCGGGAACCAGAGCC +
Preference number: 5 (lower is better)
Translates to: AAGEAGLLGKLCGDG*SLRGYSKERAGTRA
Trigger: GGCTCTGGTTCCCGCCCGCTCCTTGGAATAACCCCTGAGGCTCCAGCCGTCACCGCAAAGTTTCCCGAGGAGACCCGCCTCCCCGGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682287.1
CDS-3UTR CAA 90 bp GCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACGGAGCGTGGTGCATGGAACGTCTTGGCAGCCGCATaGGCCACGCCGCCCTGCGGC +
Preference number: 5 (lower is better)
Translates to: AGKATASAGASTERGAWNVLAAA*ATPPCG
Trigger: GCCGCAGGGCGGCGTGGCCAATGCGGCTGCCAAGAC...GTTCCATGCACCACGCTCCGTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS TCA 90 bp AGTCCCGCAGGTCCATGGTGGCCGTGGTCATCACAACGGTGGCCGTaGCAGTGGCAGTGGGCGTGGTGGTGGCAGTGGCGGTGGGGTGTG +
Preference number: 5 (lower is better)
Translates to: SPAGPWWPWSSQRWP*QWQWAWWWQWRWGV
Trigger: CACACCCCACCGCCACTGCCACCACCACGCCCACTGCCACTGTCACGGCCACCGTTGTGATGACCACGGCCACCATGGACCTGCGGGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS GCA 90 bp GCTTCTCCAGCAGCGGGATGCGGGCCAGCGAGTCCCTGGCAATGGTaGGCACATTGTTGTCCTGCAGGTGCAGCTCCCGGAGGGAGCGGG +
Preference number: 5 (lower is better)
Translates to: ASPAAGCGPASPWQW*AHCCPAGAAPGGSG
Trigger: CCCGCTCCCTCCGGGAGCTGCACCTGCAGGACAACAATGTGCGCACCATTGCCAGGGACTCGCTGGCCCGCATCCCGCTGCTGGAGAAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS GCA 90 bp AGAGGAGGCGGGGAGCGTGGCCTTCCACGTGATGCGGATGGAGTCTaGCGTCAGGGCCTTCACGTGGATGGCCAGGGTCTTGGCGCCATC +
Preference number: 5 (lower is better)
Translates to: RGGGERGLPRDADGV*RQGLHVDGQGLGAI
Trigger: GATGGCGCCAAGACCCTGGCCATCCACGTGAAGGCCCTGACGGCAGACTCCATCCGCATCACGTGGAAGGCCACGCTCCCCGCCTCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS GCA 90 bp CCCGGGTGGGCGGGCATCATGTGTAGGAGTAGTCTATGTCGGGGATaGCGCCGTCCCGGTAGCCCCGCGTGGTGCCGTAGCCAATGGTGT +
Preference number: 5 (lower is better)
Translates to: PGWAGIMCRSSLCRG*RRPGSPAWCRSQWC
Trigger: ACACCATTGGCTACGGCACCACGCGGGGCTACCGGGACGGCGGCATCCCCGACATAGACTACTCCTACACATGATGCCCGCCCACCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CCA 90 bp GCAGCTTCTCCAGCAGCGGGATGCGGGCCAGCGAGTCCCTGGCAATaGTGCGCACATTGTTGTCCTGCAGGTGCAGCTCCCGGAGGGAGC +
Preference number: 5 (lower is better)
Translates to: AASPAAGCGPASPWQ*CAHCCPAGAAPGGS
Trigger: GCTCCCTCCGGGAGCTGCACCTGCAGGACAACAATGTGCGCACCATTGCCAGGGACTCGCTGGCCCGCATCCCGCTGCTGGAGAAGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CCA 90 bp TGGTGGCAGAGGCGTGGTTGCTGGCCGTGGTCTTGGCAGCCGCATTaGCCACGCCGCCCTGCGGCCCCGTCTCAAAACACTCGTCCATCT +
Preference number: 5 (lower is better)
Translates to: WWQRRGCWPWSWQPH*PRRPAAPSQNTRPS
Trigger: AGATGGACGAGTGTTTTGAGACGGGGCCGCAGGGCGGCGTGGCCAATGCGGCTGCCAAGACCACGGCCAGCAACCACGCCTCTGCCACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS TCA 90 bp CCGGAGGCCCCTGCCAAAGTCACGAAGCCGCGACTCAGGACACCGTaGGCTCAGATGGCGCTCACATTCCCTGCCCCGTGGTCCTACCAG +
Preference number: 5 (lower is better)
Translates to: PEAPAKVTKPRLRTP*AQMALTFPAPWSYQ
Trigger: CTGGTAGGACCACGGGGCAGGGAATGTGAGCGCCATCTGAGCTCACGGTGTCCTGAGTCGCGGCTTCGTGACTTTGGCAGGGGCCTCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS GCA 90 bp GCCGCGACTCAGGACACCGTGAGCTCAGATGGCGCTCACATTCCCTaGCCCGTGGTCCTACCAGGCCTTGCACCACTAGGGACGCAGACC +
Preference number: 5 (lower is better)
Translates to: AATQDTVSSDGAHIP*PVVLPGLAPLGTQT
Trigger: GGTCTGCGTCCCTAGTGGTGCAAGGCCTGGTAGGACCACGGGGCAGGGAATGTGAGCGCCATCTGAGCTCACGGTGTCCTGAGTCGCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS GCA 90 bp GACTTGGGCTCCAGGGCTGTCAGCAGGTACTCTGTCTTGTCCCCCTaGACCAAGGTCTCCGTGATGGAGCCCACGGCTGGGCTGTGGCCC +
Preference number: 5 (lower is better)
Translates to: DLGSRAVSRYSVLSP*TKVSVMEPTAGLWP
Trigger: GGGCCACAGCCCAGCCGTGGGCTCCATCACGGAGACCTTGGTGCAGGGGGACAAGACAGAGTACCTGCTGACAGCCCTGGAGCCCAAGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS GCA 90 bp AGTAGTCTATGTCGGGGATGCCGCCGTCCCGGTAGCCCCGCGTGGTaGCGTAGCCAATGGTGTGTGTGGCCTTGCAGAGGCTGCTGCCGT +
Preference number: 5 (lower is better)
Translates to: SSLCRGCRRPGSPAW*RSQWCVWPCRGCCR
Trigger: ACGGCAGCAGCCTCTGCAAGGCCACACACACCATTGGCTACGGCACCACGCGGGGCTACCGGGACGGCGGCATCCCCGACATAGACTACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CCA 90 bp CTTCGTCGCTGCCGCCCAAGACCCTCTGGGTTTGACTGGGGTCACTaGTCCGGAGGCCCCTGCCAAAGTCACGAAGCCGCGACTCAGGAC +
Preference number: 5 (lower is better)
Translates to: LRRCRPRPSGFDWGH*SGGPCQSHEAATQD
Trigger: GTCCTGAGTCGCGGCTTCGTGACTTTGGCAGGGGCCTCCGGACCAGTGACCCCAGTCAAACCCAGAGGGTCTTGGGCGGCAGCGACGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CCA 90 bp CCAGGTGCAGCTTCTCCAGCAGCGGGATGCGGGCCAGCGAGTCCCTaGCAATGGTGCGCACATTGTTGTCCTGCAGGTGCAGCTCCCGGA +
Preference number: 5 (lower is better)
Translates to: PGAASPAAGCGPASP*QWCAHCCPAGAAPG
Trigger: TCCGGGAGCTGCACCTGCAGGACAACAATGTGCGCACCATTGCCAGGGACTCGCTGGCCCGCATCCCGCTGCTGGAGAAGCTGCACCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CCA 90 bp AGCTCCTCCAGCGTGTGCGGCAGCCCCGAGGGGATGCTGCTCAGGTaGTTCCGGCTCAGGAAGAGCAGCTTGAGCTGTTTGCTGTCGGCG +
Preference number: 5 (lower is better)
Translates to: SSSSVCGSPEGMLLR*FRLRKSSLSCLLSA
Trigger: CGCCGACAGCAAACAGCTCAAGCTGCTCTTCCTGAGCCGGAACCACCTGAGCAGCATCCCCTCGGGGCTGCCGCACACGCTGGAGGAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CCA 90 bp AGGCGCAGCCCTGGCCTTTTGGCCTTGAGGGTAAACAGGGAACCCTaGGGCGTGGTGGCAGAGGCGTGGTTGCTGGCCGTGGTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: RRSPGLLALRVNREP*GVVAEAWLLAVVLA
Trigger: TGCCAAGACCACGGCCAGCAACCACGCCTCTGCCACCACGCCCCAGGGTTCCCTGTTTACCCTCAAGGCCAAAAGGCCAGGGCTGCGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CCA 90 bp TCAGGGCCTTCACGTGGATGGCCAGGGTCTTGGCGCCATCACCCGTaGCCATGGGGTAGTCAATGTTGGAGTCGGGGAGGCGCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: SGPSRGWPGSWRHHP*PWGSQCWSRGGAAL
Trigger: CAGGGCTGCGCCTCCCCGACTCCAACATTGACTACCCCATGGCCACGGGTGATGGCGCCAAGACCCTGGCCATCCACGTGAAGGCCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CCA 90 bp AGGAGTAGTCTATGTCGGGGATGCCGCCGTCCCGGTAGCCCCGCGTaGTGCCGTAGCCAATGGTGTGTGTGGCCTTGCAGAGGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: RSSLCRGCRRPGSPA*CRSQWCVWPCRGCC
Trigger: GCAGCAGCCTCTGCAAGGCCACACACACCATTGGCTACGGCACCACGCGGGGCTACCGGGACGGCGGCATCCCCGACATAGACTACTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS-3UTR CAA 90 bp ACAGATGCACCTCCAGGTGGCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACGGCGCGGCCAGCGAATaGCGCACCAGCGAGAGCTCT +
Preference number: 5 (lower is better)
Translates to: TDAPPGGRESYGFRRGFYGAASE*RTSESS
Trigger: AGAGCTCTCGCTGGTGCGCAATTCGCTGGCCGCGCC...GTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGCCACCTGGAGGTGCATCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS GCA 90 bp TGGTTGCTGGCCGTGGTCTTGGCAGCCGCATTGGCCACGCCGCCCTaGGGCCCCGTCTCAAAACACTCGTCCATCTCGCTGGTAATGTCC +
Preference number: 5 (lower is better)
Translates to: WLLAVVLAAALATPP*GPVSKHSSISLVMS
Trigger: GGACATTACCAGCGAGATGGACGAGTGTTTTGAGACGGGGCCGCAGGGCGGCGTGGCCAATGCGGCTGCCAAGACCACGGCCAGCAACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS-3UTR CAA 90 bp ACAGATGCACCTCCAGGTGGCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACAGGCGCCGCAGGCTGTaGAGGCCCTTGAAGGCATGC +
Preference number: 5 (lower is better)
Translates to: TDAPPGGRESYGFRRGFYRRRRL*RPLKAC
Trigger: GCATGCCTTCAAGGGCCTCAACAGCCTGCGGCGCCT...GTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGCCACCTGGAGGTGCATCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CAA 90 bp GGAGAGCTGCGTGGGAGCTTTGAGAGCCGGCTGCTTCTCCCTGGCGGTTCCTTTTTGCTGGCCGTGGTCTaGGCAGCCGCATTGGCCACG +
Preference number: 5 (lower is better)
Translates to: GELRGSFESRLLLPGGSFLLAVV*AAALAT
Trigger: CGTGGCCAATGCGGCTGCCAAGACCACGGCCAGCAA...AAAGGAACCGCCAGGGAGAAGCAGCCGGCTCTCAAAGCTCCCACGCAGCTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CAA 90 bp CTCTCTTGGATTGCAGCAGGCTGGGCAAAGCCACATGGCCACGCCAGGGCAGCTGTGGCAGAGGCGTGGTaGCTGGCCGTGGTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: LSWIAAGWAKPHGHARAAVAEAW*LAVVLA
Trigger: TGCCAAGACCACGGCCAGCAACCACGCCTCTGCCAC...AGCTGCCCTGGCGTGGCCATGTGGCTTTGCCCAGCCTGCTGCAATCCAAGAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS CCA 90 bp CCAGGGCACAGAGAGGGGATCCGGTGCCTCGGTATCCTGGTCTCCTaGCGTTCAGATGAGGCTGTGGGCCACAATCAGCAGCCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: PGHREGIRCLGILVS*RSDEAVGHNQQPPW
Trigger: CCAAGGAGGCTGCTGATTGTGGCCCACAGCCTCATCTGAACGCCAGGAGACCAGGATACCGAGGCACCGGATCCCCTCTCTGTGCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CCA 90 bp CTGCCAAAGTCACGAAGCCGCGACTCAGGACACCGTGAGCTCAGATaGCGCTCACATTCCCTGCCCCGTGGTCCTACCAGGCCTTGCACC +
Preference number: 5 (lower is better)
Translates to: LPKSRSRDSGHRELR*RSHSLPRGPTRPCT
Trigger: GGTGCAAGGCCTGGTAGGACCACGGGGCAGGGAATGTGAGCGCCATCTGAGCTCACGGTGTCCTGAGTCGCGGCTTCGTGACTTTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CCA 90 bp GGATGGAGTCTGCCGTCAGGGCCTTCACGTGGATGGCCAGGGTCTTaGCGCCATCACCCGTGGCCATGGGGTAGTCAATGTTGGAGTCGG +
Preference number: 5 (lower is better)
Translates to: GWSLPSGPSRGWPGS*RHHPWPWGSQCWSR
Trigger: CCGACTCCAACATTGACTACCCCATGGCCACGGGTGATGGCGCCAAGACCCTGGCCATCCACGTGAAGGCCCTGACGGCAGACTCCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS-3UTR CAA 90 bp CGGGAGAGCTGCGTGGGAGCTTTGAGAGCCGGCTGCTTCTCCCTGGCGGTTCCTGCAATGGTGCGCACATaGTTGTCCTGCAGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: RESCVGALRAGCFSLAVPAMVRT*LSCRCS
Trigger: GCTGCACCTGCAGGACAACAATGTGCGCACCATTGC...AGGAACCGCCAGGGAGAAGCAGCCGGCTCTCAAAGCTCCCACGCAGCTCTCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CAA 90 bp CTGAAAACCTTCCATCGGGTCGCCAGCGAGTGGCCAGTGGCGGGAGAGCTGCGTTCGCTGGTAATGTCCTaGATGGCCATGCCCCGGACC +
Preference number: 5 (lower is better)
Translates to: LKTFHRVASEWPVAGELRSLVMS*MAMPRT
Trigger: GGTCCGGGGCATGGCCATCAAGGACATTACCAGCGA...ACGCAGCTCTCCCGCCACTGGCCACTCGCTGGCGACCCGATGGAAGGTTTTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CAA 90 bp GGAGAGCTGCGTGGGAGCTTTGAGAGCCGGCTGCTTCTCCCTGGCGGTTCCTTTTTGGCGCGGTACGGGTaGATGGGCAGCATCTGCAGC +
Preference number: 5 (lower is better)
Translates to: GELRGSFESRLLLPGGSFLARYG*MGSICS
Trigger: GCTGCAGATGCTGCCCATCAACCCGTACCGCGCCAA...AAAGGAACCGCCAGGGAGAAGCAGCCGGCTCTCAAAGCTCCCACGCAGCTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS GCA 90 bp CCAAGACCCTCTGGGTTTGACTGGGGTCACTGGTCCGGAGGCCCCTaGCAAAGTCACGAAGCCGCGACTCAGGACACCGTGAGCTCAGAT +
Preference number: 5 (lower is better)
Translates to: PRPSGFDWGHWSGGP*QSHEAATQDTVSSD
Trigger: ATCTGAGCTCACGGTGTCCTGAGTCGCGGCTTCGTGACTTTGGCAGGGGCCTCCGGACCAGTGACCCCAGTCAAACCCAGAGGGTCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CCA 90 bp TCCTGGCGTTCAGATGAGGCTGTGGGCCACAATCAGCAGCCTCCTTaGCACCCTAGGCTGCAGGCGCAGCTGGCTTATCCCTGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: SWRSDEAVGHNQQPP*HPRLQAQLAYPCRV
Trigger: CACTCTGCAGGGATAAGCCAGCTGCGCCTGCAGCCTAGGGTGCCAAGGAGGCTGCTGATTGTGGCCCACAGCCTCATCTGAACGCCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS-3UTR CAA 90 bp AGGTGGCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACGGAGCGTGGTGCATTGGGGGATGCCGGCGTaGTTGATCTGGTTGTTCTGC +
Preference number: 5 (lower is better)
Translates to: RWQGKLRLPPGLLRSVVHWGMPA*LIWLFC
Trigger: GCAGAACAACCAGATCAACAACGCCGGCATCCCCCA...ATGCACCACGCTCCGTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGCCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CAA 90 bp AGACAGATGCACCTCCAGGTGGCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTAGCAGCTTGAGCTGTTaGCTGTCGGCGAAGGCGTCC +
Preference number: 5 (lower is better)
Translates to: RQMHLQVAGKATASAGASSSLSC*LSAKAS
Trigger: GGACGCCTTCGCCGACAGCAAACAGCTCAAGCTGCT...AGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGCCACCTGGAGGTGCATCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CAA 90 bp GCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACGGAGCGTGGTGCATGGAACCTCAGGAAGAGCAGCTaGAGCTGTTTGCTGTCGGCG +
Preference number: 5 (lower is better)
Translates to: AGKATASAGASTERGAWNLRKSS*SCLLSA
Trigger: CGCCGACAGCAAACAGCTCAAGCTGCTCTTCCTGAG...GTTCCATGCACCACGCTCCGTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CAA 90 bp ACAGATGCACCTCCAGGTGGCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACAGGCTGTTGAGGCCCTaGAAGGCATGCAGCGGGATG +
Preference number: 5 (lower is better)
Translates to: TDAPPGGRESYGFRRGFYRLLRP*KACSGM
Trigger: CATCCCGCTGCATGCCTTCAAGGGCCTCAACAGCCT...GTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGCCACCTGGAGGTGCATCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CAA 90 bp ACAGATGCACCTCCAGGTGGCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACCGCAGCCCTGGCCTTTaGGCCTTGAGGGTAAACAGG +
Preference number: 5 (lower is better)
Translates to: TDAPPGGRESYGFRRGFYRSPGL*ALRVNR
Trigger: CCTGTTTACCCTCAAGGCCAAAAGGCCAGGGCTGCG...GTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGCCACCTGGAGGTGCATCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CAA 90 bp GAGCATGAGGTGTCCACAGATGTTGTACAGGTAGTATCCTTCCAGTTCAGGGGGATGAGGCCCCGCACGTaGACCACGGCCGCCCGTGCC +
Preference number: 5 (lower is better)
Translates to: EHEVSTDVVQVVSFQFRGMRPRT*TTAARA
Trigger: GGCACGGGCGGCCGTGGTCAACGTGCGGGGCCTCAT...CCCCCTGAACTGGAAGGATACTACCTGTACAACATCTGTGGACACCTCATGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CAA 90 bp ACAGATGCACCTCCAGGTGGCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACCCTGGCCTTTTGGCCTaGAGGGTAAACAGGGAACCC +
Preference number: 5 (lower is better)
Translates to: TDAPPGGRESYGFRRGFYPGLLA*RVNREP
Trigger: GGGTTCCCTGTTTACCCTCAAGGCCAAAAGGCCAGG...GTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGCCACCTGGAGGTGCATCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CAA 90 bp AGGTGGCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACGGAGCGTGGTGCATACCACGTACTCTTCTTaGGCGCGGTACGGGTTGATG +
Preference number: 5 (lower is better)
Translates to: RWQGKLRLPPGLLRSVVHTTYSS*ARYGLM
Trigger: CATCAACCCGTACCGCGCCAAAGAAGAGTACGTGGT...ATGCACCACGCTCCGTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CAA 90 bp ACAGATGCACCTCCAGGTGGCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACCCTTGCTCTCTTGGATaGCAGCAGGCTGGGCAAAGC +
Preference number: 5 (lower is better)
Translates to: TDAPPGGRESYGFRRGFYPCSLG*QQAGQS
Trigger: GCTTTGCCCAGCCTGCTGCAATCCAAGAGAGCAAGG...GTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGCCACCTGGAGGTGCATCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS CCA 90 bp TGTGTGGCCTTGCAGAGGCTGCTGCCGTTGGAGGGGAAGATAGTGTaGACCACGTACTCTTCTTTGGCGCGGTACGGGTTGATGGGCAGC +
Preference number: 5 (lower is better)
Translates to: CVALQRLLPLEGKIV*TTYSSLARYGLMGS
Trigger: GCTGCCCATCAACCCGTACCGCGCCAAAGAAGAGTACGTGGTCCACACTATCTTCCCCTCCAACGGCAGCAGCCTCTGCAAGGCCACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS GCA 90 bp ATGACGGAGCTGAGAGGGAGCCACTCTCCAAAGGCTCTGTATTCCTaGCACTCAGGCTGTGTCTCCGGGGGAAAGGAGGGGGTCCATTAC +
Preference number: 5 (lower is better)
Translates to: MTELRGSHSPKALYS*HSGCVSGGKEGVHY
Trigger: GTAATGGACCCCCTCCTTTCCCCCGGAGACACAGCCTGAGTGGCAGGAATACAGAGCCTTTGGAGAGTGGCTCCCTCTCAGCTCCGTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS GCA 90 bp CTCCTGGTTGAGTGTGGTGGTAGGGCCATAGCTGTCGGCTGTCTCTaGCTTGGCACACACGGGTGTCTCATCAGCTACGTAGGCATTGCT +
Preference number: 5 (lower is better)
Translates to: LLVECGGRAIAVGCL*LGTHGCLISYVGIA
Trigger: AGCAATGCCTACGTAGCTGATGAGACACCCGTGTGTGCCAAGGCAGAGACAGCCGACAGCTATGGCCCTACCACCACACTCAACCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS GCA 90 bp TATCCTTCTTGGTCCCTGACTCCATATAGTCATCCTTTTTCCTGCTaGCCCGGTTGTAGGCCCTCTCCCGGGTCAGCAGCTCGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: YPSWSLTPYSHPFSC*PGCRPSPGSAARQP
Trigger: AGGCTGGCGAGCTGCTGACCCGGGAGAGGGCCTACAACCGGGGCAGCAGGAAAAAGGATGACTATATGGAGTCAGGGACCAAGAAGGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS-3UTR CAA 90 bp TACAAAATCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGGATGGCCAGGGTCTaGGCGCCATCACCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: YKIVSPPQTLLSAEESHPWMARV*APSPVA
Trigger: GGCCACGGGTGATGGCGCCAAGACCCTGGCCATCCA...TGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTTTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CAA 90 bp GCAGGGAAAGCTACGGCTTCCGCCGGGGCTTCTACGGAGCGTGGTGCATGGAACCTTCACTCTCTGGTCTaGTCTGTCCAAAAAGGAATC +
Preference number: 5 (lower is better)
Translates to: AGKATASAGASTERGAWNLHSLV*SVQKGI
Trigger: GATTCCTTTTTGGACAGACAAGACCAGAGAGTGAAG...GTTCCATGCACCACGCTCCGTAGAAGCCCCGGCGGAAGCCGTAGCTTTCCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CAA 90 bp ACAAAATCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATTCGGCGATGCGCTGGTaGGCCAGCAGGTTACCGTCC +
Preference number: 5 (lower is better)
Translates to: TKSSALPKLCFLRRKVTHSAMRW*ASRLPS
Trigger: GGACGGTAACCTGCTGGCCAACCAGCGCATCGCCGA...ATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CAA 90 bp AAGGACCGTGCATGTGGCTCTATCTACCCATCTGTACTTAGAGACACCGCGACAACGTTGACCTTGGTCTaGAGGTCCTGGGGGATGCCG +
Preference number: 5 (lower is better)
Translates to: KDRACGSIYPSVLRDTATTLTLV*RSWGMP
Trigger: CGGCATCCCCCAGGACCTCAAGACCAAGGTCAACGT...TGTCGCGGTGTCTCTAAGTACAGATGGGTAGATAGAGCCACATGCACGGTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CAA 90 bp TACAAAATCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCAAGGGAGCGGGGCAGGTaGATGGGGAACTCATCCAGG +
Preference number: 5 (lower is better)
Translates to: YKIVSPPQTLLSAEESHPRERGR*MGNSSR
Trigger: CCTGGATGAGTTCCCCATCAACCTGCCCCGCTCCCT...TGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTTTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CAA 90 bp AAGGACCGTGCATGTGGCTCTATCTACCCATCTGTACTTAGAGACACCGCGACAAGCGTGGTCAGGTTGTaGTTGGACAGGTCCAGCCGC +
Preference number: 5 (lower is better)
Translates to: KDRACGSIYPSVLRDTATSVVRL*LDRSSR
Trigger: GCGGCTGGACCTGTCCAACAACAACCTGACCACGCT...TGTCGCGGTGTCTCTAAGTACAGATGGGTAGATAGAGCCACATGCACGGTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CAA 90 bp GAGCATGAGGTGTCCACAGATGTTGTACAGGTAGTATCCTTCCAGTTCAGGGGGGCGTTCTGCTCCTGGTaGAGTGTGGTGGTAGGGCCA +
Preference number: 5 (lower is better)
Translates to: EHEVSTDVVQVVSFQFRGAFCSW*SVVVGP
Trigger: TGGCCCTACCACCACACTCAACCAGGAGCAGAACGC...CCCCCTGAACTGGAAGGATACTACCTGTACAACATCTGTGGACACCTCATGCTC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CAA 90 bp AAGGACCGTGCATGTGGCTCTATCTACCCATCTGTACTTAGAGACACCGCGACACAGAGGCTGCTGCCGTaGGAGGGGAAGATAGTGTGG +
Preference number: 5 (lower is better)
Translates to: KDRACGSIYPSVLRDTATQRLLP*EGKIVW
Trigger: CCACACTATCTTCCCCTCCAACGGCAGCAGCCTCTG...TGTCGCGGTGTCTCTAAGTACAGATGGGTAGATAGAGCCACATGCACGGTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS GCA 90 bp CCTTTAAGTCACTTGGCAGAATGGGCTGGGTGCAGAGAGTGTTCTTaGATGACGGAGCTGAGAGGGAGCCACTCTCCAAAGGCTCTGTAT +
Preference number: 5 (lower is better)
Translates to: PLSHLAEWAGCRECS*MTELRGSHSPKALY
Trigger: ATACAGAGCCTTTGGAGAGTGGCTCCCTCTCAGCTCCGTCATGCAAGAACACTCTCTGCACCCAGCCCATTCTGCCAAGTGACTTAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CCA 90 bp CTTGCTGGGGAGGTAGGGAGGATGAGTTATTCCCGCTTCACTCTCTaGTCTTGTCTGTCCAAAAAGGAATCCATCTTCTCGCCCACTGCC +
Preference number: 5 (lower is better)
Translates to: LAGEVGRMSYSRFTL*SCLSKKESIFSPTA
Trigger: GGCAGTGGGCGAGAAGATGGATTCCTTTTTGGACAGACAAGACCAGAGAGTGAAGCGGGAATAACTCATCCTCCCTACCTCCCCAGCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS-3UTR CAA 90 bp CCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGGAATTTCTCTTCCTTGCACCTGCACGTTGACCTaGGTCTTGAGGTCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: PKLCFLRRKVTHGISLPCTCTLT*VLRSWG
Trigger: CCCCCAGGACCTCAAGACCAAGGTCAACGTGCAGGT...GCAAGGAAGAGAAATTCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CAA 90 bp ACAAAATCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATATGGTGCGCACATTGTaGTCCTGCAGGTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: TKSSALPKLCFLRRKVTHMVRTL*SCRCSS
Trigger: GGAGCTGCACCTGCAGGACAACAATGTGCGCACCAT...ATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CAA 90 bp TACAAAATCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCACGCAGCCACATGAGGTaGCAGCCACAAAACCAAGGG +
Preference number: 5 (lower is better)
Translates to: YKIVSPPQTLLSAEESHPRSHMR*QPQNQG
Trigger: CCCTTGGTTTTGTGGCTGCAACCTCATGTGGCTGCG...TGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTTTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CAA 90 bp TACAAAATCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCAAGCAGGTACTCTGTCTaGTCCCCCTGCACCAAGGTC +
Preference number: 5 (lower is better)
Translates to: YKIVSPPQTLLSAEESHPSRYSV*SPCTKV
Trigger: GACCTTGGTGCAGGGGGACAAGACAGAGTACCTGCT...TGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGATTTTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CAA 90 bp CCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGGAATTTCTCTTCCTTGCATGGTGTGTGTGGCCTaGCAGAGGCTGCTGCCGTTG +
Preference number: 5 (lower is better)
Translates to: PKLCFLRRKVTHGISLPCMVCVA*QRLLPL
Trigger: CAACGGCAGCAGCCTCTGCAAGGCCACACACACCAT...GCAAGGAAGAGAAATTCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CAA 90 bp CCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGGAATTTCTCTTCCTTGCTCAACTCTTGCCCTTTaGTCTGCAGCCCGCCACCTC +
Preference number: 5 (lower is better)
Translates to: PKLCFLRRKVTHGISLPCSTLAL*SAARHL
Trigger: GAGGTGGCGGGCTGCAGACAAAAGGGCAAGAGTTGA...GCAAGGAAGAGAAATTCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CAA 90 bp CCCAGCCCTGCCTGCAATATTATTTTTAGTCCTTCCCTCCCCAACTGGCATAACCCACAAAACCAAGGGTaGTTCCTGAGCAGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: PSPACNIIFSPSLPNWHNPQNQG*FLSSSW
Trigger: CCAGCTGCTGCTCAGGAACAACCCTTGGTTTTGTGG...GTTATGCCAGTTGGGGAGGGAAGGACTAAAAATAATATTGCAGGCAGGGCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CAA 90 bp CCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGGAATTTCTCTTCCTTGCGTGCAGAGAGTGTTCTaGCATGACGGAGCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: PKLCFLRRKVTHGISLPCVQRVF*HDGAER
Trigger: CCTCTCAGCTCCGTCATGCAAGAACACTCTCTGCAC...GCAAGGAAGAGAAATTCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CAA 90 bp TCGTCAGCCCTCCCCAAACTTTGCTTTCTGCGGAGGAAAGTCACCCATGGAATTATTCCTTTAAGTCACTaGGCAGAATGGGCTGGGTGC +
Preference number: 5 (lower is better)
Translates to: SSALPKLCFLRRKVTHGIIPLSH*AEWAGC
Trigger: GCACCCAGCCCATTCTGCCAAGTGACTTAAAGGAAT...AATTCCATGGGTGACTTTCCTCCGCAGAAAGCAAAGTTTGGGGAGGGCTGACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS-3UTR CAA 90 bp ACTTGGTATAAATTATGTCTTCAACAATGTCGAATTCCCCCTCCTGCCTTCTATAGCTGCGTGGGAGCTTaGAGAGCCGGCTGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: TWYKLCLQQCRIPPPAFYSCVGA*RAGCFS
Trigger: GGAGAAGCAGCCGGCTCTCAAAGCTCCCACGCAGCT...ATAGAAGGCAGGAGGGGGAATTCGACATTGTTGAAGACATAATTTATACCAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246841.3
CDS CCA 72 bp GCGTGGTGGCAGAGGCGTGGTTGCTGGCCGTGGTCTTaGCAGCCGCATTGGCCACGCCGCCCTGCGGCCCCG +
Preference number: 6 (lower is better)
Translates to: AWWQRRGCWPWS*QPHWPRRPAAP
Trigger: CGGGGCCGCAGGGCGGCGTGGCCAATGCGGCTGCCAAGACCACGGCCAGCAACCACGCCTCTGCCACCACGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CAA 72 bp GGCGTGGTGGCAGAGGCGTGGTTGCTGGCCGTGGTCTaGGCAGCCGCATTGGCCACGCCGCCCTGCGGCCCC +
Preference number: 6 (lower is better)
Translates to: GVVAEAWLLAVV*AAALATPPCGP
Trigger: GGGGCCGCAGGGCGGCGTGGCCAATGCGGCTGCCAAGACCACGGCCAGCAACCACGCCTCTGCCACCACGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CCA 72 bp CCTGGGGCGTGGTGGCAGAGGCGTGGTTGCTGGCCGTaGTCTTGGCAGCCGCATTGGCCACGCCGCCCTGCG +
Preference number: 6 (lower is better)
Translates to: PGAWWQRRGCWP*SWQPHWPRRPA
Trigger: CGCAGGGCGGCGTGGCCAATGCGGCTGCCAAGACCACGGCCAGCAACCACGCCTCTGCCACCACGCCCCAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CCA 72 bp GGGAACCCTGGGGCGTGGTGGCAGAGGCGTGGTTGCTaGCCGTGGTCTTGGCAGCCGCATTGGCCACGCCGC +
Preference number: 6 (lower is better)
Translates to: GNPGAWWQRRGC*PWSWQPHWPRR
Trigger: GCGGCGTGGCCAATGCGGCTGCCAAGACCACGGCCAGCAACCACGCCTCTGCCACCACGCCCCAGGGTTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CAA 90 bp GAACCCTGGGGCGTGGTGGCAGAGGCGTGGTTGCTGGCCGTGGTCTaGGCAGCCGCATTGGCCACGCCGCCCTGCGGCCCCGTCTCAAAA +
Preference number: 6 (lower is better)
Translates to: EPWGVVAEAWLLAVV*AAALATPPCGPVSK
Trigger: TTTTGAGACGGGGCCGCAGGGCGGCGTGGCCAATGCGGCTGCCAAGACCACGGCCAGCAACCACGCCTCTGCCACCACGCCCCAGGGTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS GCA 72 bp ACAGGGAACCCTGGGGCGTGGTGGCAGAGGCGTGGTTaGTGGCCGTGGTCTTGGCAGCCGCATTGGCCACGC +
Preference number: 6 (lower is better)
Translates to: TGNPGAWWQRRG*WPWSWQPHWPR
Trigger: GCGTGGCCAATGCGGCTGCCAAGACCACGGCCAGCAACCACGCCTCTGCCACCACGCCCCAGGGTTCCCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS GCA 72 bp TGTCGGGGATGCCGCCGTCCCGGTAGCCCCGCGTGGTaGCGTAGCCAATGGTGTGTGTGGCCTTGCAGAGGC +
Preference number: 6 (lower is better)
Translates to: CRGCRRPGSPAW*RSQWCVWPCRG
Trigger: GCCTCTGCAAGGCCACACACACCATTGGCTACGGCACCACGCGGGGCTACCGGGACGGCGGCATCCCCGACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CCA 72 bp GAGCTTCTGCAGGTGGGCGCTGGGCAGGTTGAGGGGTaGCGCGGCCAGCGAATTGCGCACCAGCGAGAGCTC +
Preference number: 6 (lower is better)
Translates to: ELLQVGAGQVEG*RGQRIAHQREL
Trigger: GAGCTCTCGCTGGTGCGCAATTCGCTGGCCGCGCCACCCCTCAACCTGCCCAGCGCCCACCTGCAGAAGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CAA 72 bp CGGGCCAGCGAGTCCCTGGCAATGGTGCGCACATTGTaGTCCTGCAGGTGCAGCTCCCGGAGGGAGCGGGGC +
Preference number: 6 (lower is better)
Translates to: RASESLAMVRTL*SCRCSSRRERG
Trigger: GCCCCGCTCCCTCCGGGAGCTGCACCTGCAGGACAACAATGTGCGCACCATTGCCAGGGACTCGCTGGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CAA 72 bp GAGGCGTGGTTGCTGGCCGTGGTCTTGGCAGCCGCATaGGCCACGCCGCCCTGCGGCCCCGTCTCAAAACAC +
Preference number: 6 (lower is better)
Translates to: EAWLLAVVLAAA*ATPPCGPVSKH
Trigger: GTGTTTTGAGACGGGGCCGCAGGGCGGCGTGGCCAATGCGGCTGCCAAGACCACGGCCAGCAACCACGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CAA 90 bp GTGGTGGCAGAGGCGTGGTTGCTGGCCGTGGTCTTGGCAGCCGCATaGGCCACGCCGCCCTGCGGCCCCGTCTCAAAACACTCGTCCATC +
Preference number: 6 (lower is better)
Translates to: VVAEAWLLAVVLAAA*ATPPCGPVSKHSSI
Trigger: GATGGACGAGTGTTTTGAGACGGGGCCGCAGGGCGGCGTGGCCAATGCGGCTGCCAAGACCACGGCCAGCAACCACGCCTCTGCCACCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CAA 90 bp TTGAGGGTAAACAGGGAACCCTGGGGCGTGGTGGCAGAGGCGTGGTaGCTGGCCGTGGTCTTGGCAGCCGCATTGGCCACGCCGCCCTGC +
Preference number: 6 (lower is better)
Translates to: LRVNREPWGVVAEAW*LAVVLAAALATPPC
Trigger: GCAGGGCGGCGTGGCCAATGCGGCTGCCAAGACCACGGCCAGCAACCACGCCTCTGCCACCACGCCCCAGGGTTCCCTGTTTACCCTCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS GCA 72 bp GCAGCTCCTCCAGCGTGTGCGGCAGCCCCGAGGGGATaGTGCTCAGGTGGTTCCGGCTCAGGAAGAGCAGCT +
Preference number: 6 (lower is better)
Translates to: AAPPACAAAPRG*CSGGSGSGRAA
Trigger: AGCTGCTCTTCCTGAGCCGGAACCACCTGAGCAGCATCCCCTCGGGGCTGCCGCACACGCTGGAGGAGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS GCA 72 bp GCACATGAGGCCCCGCACGTTGACCACGGCCGCCCGTaGCTTCACCCAGTCCCGCAGCCACATGAGGTTGCA +
Preference number: 6 (lower is better)
Translates to: AHEAPHVDHGRP*LHPVPQPHEVA
Trigger: TGCAACCTCATGTGGCTGCGGGACTGGGTGAAGGCACGGGCGGCCGTGGTCAACGTGCGGGGCCTCATGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS GCA 72 bp GCCGTGGTCTTGGCAGCCGCATTGGCCACGCCGCCCTaGGGCCCCGTCTCAAAACACTCGTCCATCTCGCTG +
Preference number: 6 (lower is better)
Translates to: AVVLAAALATPP*GPVSKHSSISL
Trigger: CAGCGAGATGGACGAGTGTTTTGAGACGGGGCCGCAGGGCGGCGTGGCCAATGCGGCTGCCAAGACCACGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CCA 72 bp AGGCGTGGTTGCTGGCCGTGGTCTTGGCAGCCGCATTaGCCACGCCGCCCTGCGGCCCCGTCTCAAAACACT +
Preference number: 6 (lower is better)
Translates to: RRGCWPWSWQPH*PRRPAAPSQNT
Trigger: AGTGTTTTGAGACGGGGCCGCAGGGCGGCGTGGCCAATGCGGCTGCCAAGACCACGGCCAGCAACCACGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CAA 72 bp AACAGGGAACCCTGGGGCGTGGTGGCAGAGGCGTGGTaGCTGGCCGTGGTCTTGGCAGCCGCATTGGCCACG +
Preference number: 6 (lower is better)
Translates to: NREPWGVVAEAW*LAVVLAAALAT
Trigger: CGTGGCCAATGCGGCTGCCAAGACCACGGCCAGCAACCACGCCTCTGCCACCACGCCCCAGGGTTCCCTGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS TCA 72 bp GCCGGAAAGAGGAGGCGGGGAGCGTGGCCTTCCACGTaGTGCGGATGGAGTCTGCCGTCAGGGCCTTCACGT +
Preference number: 6 (lower is better)
Translates to: AGKRRRGAWPST*CGWSLPSGPSR
Trigger: ACGTGAAGGCCCTGACGGCAGACTCCATCCGCATCACGTGGAAGGCCACGCTCCCCGCCTCCTCTTTCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS TCA 72 bp GGCCGGGGAGGCGGGTCTCCTCGGGAAACTTTGCGGTaGCGGCTGGAGCCTCAGGGGTTATTCCAAGGAGCG +
Preference number: 6 (lower is better)
Translates to: GRGGGSPRETLR*RLEPQGLFQGA
Trigger: CGCTCCTTGGAATAACCCCTGAGGCTCCAGCCGTCACCGCAAAGTTTCCCGAGGAGACCCGCCTCCCCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682287.1
CDS GCA 72 bp CGCTCACATTCCCTGCCCCGTGGTCCTACCAGGCCTTaGACCACTAGGGACGCAGACCTCAGCCCTGGGGTG +
Preference number: 6 (lower is better)
Translates to: RSHSLPRGPTRP*TTRDADLSPGV
Trigger: CACCCCAGGGCTGAGGTCTGCGTCCCTAGTGGTGCAAGGCCTGGTAGGACCACGGGGCAGGGAATGTGAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS GCA 72 bp GCAGCGGGATGCGGGCCAGCGAGTCCCTGGCAATGGTaGGCACATTGTTGTCCTGCAGGTGCAGCTCCCGGA +
Preference number: 6 (lower is better)
Translates to: AAGCGPASPWQW*AHCCPAGAAPG
Trigger: TCCGGGAGCTGCACCTGCAGGACAACAATGTGCGCACCATTGCCAGGGACTCGCTGGCCCGCATCCCGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS GCA 72 bp GCGGGCATCATGTGTAGGAGTAGTCTATGTCGGGGATaGCGCCGTCCCGGTAGCCCCGCGTGGTGCCGTAGC +
Preference number: 6 (lower is better)
Translates to: AGIMCRSSLCRG*RRPGSPAWCRS
Trigger: GCTACGGCACCACGCGGGGCTACCGGGACGGCGGCATCCCCGACATAGACTACTCCTACACATGATGCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS GCA 72 bp GCAGCGGCCGGGGAGGCGGGTCTCCTCGGGAAACTTTaGGGTGACGGCTGGAGCCTCAGGGGTTATTCCAAG +
Preference number: 6 (lower is better)
Translates to: AAAGEAGLLGKL*GDGWSLRGYSK
Trigger: CTTGGAATAACCCCTGAGGCTCCAGCCGTCACCGCAAAGTTTCCCGAGGAGACCCGCCTCCCCGGCCGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682287.1
CDS CCA 72 bp CCAGCAGCGGGATGCGGGCCAGCGAGTCCCTGGCAATaGTGCGCACATTGTTGTCCTGCAGGTGCAGCTCCC +
Preference number: 6 (lower is better)
Translates to: PAAGCGPASPWQ*CAHCCPAGAAP
Trigger: GGGAGCTGCACCTGCAGGACAACAATGTGCGCACCATTGCCAGGGACTCGCTGGCCCGCATCCCGCTGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CCA 72 bp GTAAACAGGGAACCCTGGGGCGTGGTGGCAGAGGCGTaGTTGCTGGCCGTGGTCTTGGCAGCCGCATTGGCC +
Preference number: 6 (lower is better)
Translates to: VNREPWGVVAEA*LLAVVLAAALA
Trigger: GGCCAATGCGGCTGCCAAGACCACGGCCAGCAACCACGCCTCTGCCACCACGCCCCAGGGTTCCCTGTTTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CCA 72 bp GTGATGCGGATGGAGTCTGCCGTCAGGGCCTTCACGTaGATGGCCAGGGTCTTGGCGCCATCACCCGTGGCC +
Preference number: 6 (lower is better)
Translates to: VMRMESAVRAFT*MARVLAPSPVA
Trigger: GGCCACGGGTGATGGCGCCAAGACCCTGGCCATCCACGTGAAGGCCCTGACGGCAGACTCCATCCGCATCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CCA 72 bp ACCAAGGTCTCCGTGATGGAGCCCACGGCTGGGCTGTaGCCCAGGCGCAGCCAACTGAGCCGGAAAGAGGAG +
Preference number: 6 (lower is better)
Translates to: TKVSVMEPTAGL*PRRSQLSRKEE
Trigger: CTCCTCTTTCCGGCTCAGTTGGCTGCGCCTGGGCCACAGCCCAGCCGTGGGCTCCATCACGGAGACCTTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CCA 72 bp CTATGTCGGGGATGCCGCCGTCCCGGTAGCCCCGCGTaGTGCCGTAGCCAATGGTGTGTGTGGCCTTGCAGA +
Preference number: 6 (lower is better)
Translates to: LCRGCRRPGSPA*CRSQWCVWPCR
Trigger: TCTGCAAGGCCACACACACCATTGGCTACGGCACCACGCGGGGCTACCGGGACGGCGGCATCCCCGACATAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CAA 72 bp ATGCGGGCCAGCGAGTCCCTGGCAATGGTGCGCACATaGTTGTCCTGCAGGTGCAGCTCCCGGAGGGAGCGG +
Preference number: 6 (lower is better)
Translates to: MRASESLAMVRT*LSCRCSSRRER
Trigger: CCGCTCCCTCCGGGAGCTGCACCTGCAGGACAACAATGTGCGCACCATTGCCAGGGACTCGCTGGCCCGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CAA 72 bp CCGTCCAGCACCAGGCGCCGCAGGCTGTTGAGGCCCTaGAAGGCATGCAGCGGGATGGTGGAGATGCGGTTG +
Preference number: 6 (lower is better)
Translates to: PSSTRRRRLLRP*KACSGMVEMRL
Trigger: CAACCGCATCTCCACCATCCCGCTGCATGCCTTCAAGGGCCTCAACAGCCTGCGGCGCCTGGTGCTGGACGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS GCA 72 bp GGGGAGCGTGGCCTTCCACGTGATGCGGATGGAGTCTaGCGTCAGGGCCTTCACGTGGATGGCCAGGGTCTT +
Preference number: 6 (lower is better)
Translates to: GERGLPRDADGV*RQGLHVDGQGL
Trigger: AAGACCCTGGCCATCCACGTGAAGGCCCTGACGGCAGACTCCATCCGCATCACGTGGAAGGCCACGCTCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CCA 72 bp CCTGGCCTTTTGGCCTTGAGGGTAAACAGGGAACCCTaGGGCGTGGTGGCAGAGGCGTGGTTGCTGGCCGTG +
Preference number: 6 (lower is better)
Translates to: PGLLALRVNREP*GVVAEAWLLAV
Trigger: CACGGCCAGCAACCACGCCTCTGCCACCACGCCCCAGGGTTCCCTGTTTACCCTCAAGGCCAAAAGGCCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CCA 72 bp GGTAGCCCCGCGTGGTGCCGTAGCCAATGGTGTGTGTaGCCTTGCAGAGGCTGCTGCCGTTGGAGGGGAAGA +
Preference number: 6 (lower is better)
Translates to: GSPAWCRSQWCV*PCRGCCRWRGR
Trigger: TCTTCCCCTCCAACGGCAGCAGCCTCTGCAAGGCCACACACACCATTGGCTACGGCACCACGCGGGGCTACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CAA 72 bp ACCTCCTTCGTCGCTGCCGCCCAAGACCCTCTGGGTTaGACTGGGGTCACTGGTCCGGAGGCCCCTGCCAAA +
Preference number: 6 (lower is better)
Translates to: TSFVAAAQDPLG*TGVTGPEAPAK
Trigger: TTTGGCAGGGGCCTCCGGACCAGTGACCCCAGTCAAACCCAGAGGGTCTTGGGCGGCAGCGACGAAGGAGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CAA 72 bp AGCAGGTTACCGTCCAGCACCAGGCGCCGCAGGCTGTaGAGGCCCTTGAAGGCATGCAGCGGGATGGTGGAG +
Preference number: 6 (lower is better)
Translates to: SRLPSSTRRRRL*RPLKACSGMVE
Trigger: CTCCACCATCCCGCTGCATGCCTTCAAGGGCCTCAACAGCCTGCGGCGCCTGGTGCTGGACGGTAACCTGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS TCA 72 bp CCTGCCAAAGTCACGAAGCCGCGACTCAGGACACCGTaGGCTCAGATGGCGCTCACATTCCCTGCCCCGTGG +
Preference number: 6 (lower is better)
Translates to: PAKVTKPRLRTP*AQMALTFPAPW
Trigger: CCACGGGGCAGGGAATGTGAGCGCCATCTGAGCTCACGGTGTCCTGAGTCGCGGCTTCGTGACTTTGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS GCA 72 bp CAGGACACCGTGAGCTCAGATGGCGCTCACATTCCCTaGCCCGTGGTCCTACCAGGCCTTGCACCACTAGGG +
Preference number: 6 (lower is better)
Translates to: QDTVSSDGAHIP*PVVLPGLAPLG
Trigger: CCCTAGTGGTGCAAGGCCTGGTAGGACCACGGGGCAGGGAATGTGAGCGCCATCTGAGCTCACGGTGTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS GCA 72 bp ACCAGGCGCCGCAGGCTGTTGAGGCCCTTGAAGGCATaGAGCGGGATGGTGGAGATGCGGTTGTCATCCAGC +
Preference number: 6 (lower is better)
Translates to: TRRRRLLRPLKA*SGMVEMRLSSS
Trigger: GCTGGATGACAACCGCATCTCCACCATCCCGCTGCATGCCTTCAAGGGCCTCAACAGCCTGCGGCGCCTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS GCA 72 bp TCCAGGGCTGTCAGCAGGTACTCTGTCTTGTCCCCCTaGACCAAGGTCTCCGTGATGGAGCCCACGGCTGGG +
Preference number: 6 (lower is better)
Translates to: SRAVSRYSVLSP*TKVSVMEPTAG
Trigger: CCCAGCCGTGGGCTCCATCACGGAGACCTTGGTGCAGGGGGACAAGACAGAGTACCTGCTGACAGCCCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CCA 72 bp CAGGGCACAGAGAGGGGATCCGGTGCCTCGGTATCCTaGTCTCCTGGCGTTCAGATGAGGCTGTGGGCCACA +
Preference number: 6 (lower is better)
Translates to: QGTERGSGASVS*SPGVQMRLWAT
Trigger: TGTGGCCCACAGCCTCATCTGAACGCCAGGAGACCAGGATACCGAGGCACCGGATCCCCTCTCTGTGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CCA 72 bp TCACGAAGCCGCGACTCAGGACACCGTGAGCTCAGATaGCGCTCACATTCCCTGCCCCGTGGTCCTACCAGG +
Preference number: 6 (lower is better)
Translates to: SRSRDSGHRELR*RSHSLPRGPTR
Trigger: CCTGGTAGGACCACGGGGCAGGGAATGTGAGCGCCATCTGAGCTCACGGTGTCCTGAGTCGCGGCTTCGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CCA 72 bp GCTTCTCCAGCAGCGGGATGCGGGCCAGCGAGTCCCTaGCAATGGTGCGCACATTGTTGTCCTGCAGGTGCA +
Preference number: 6 (lower is better)
Translates to: ASPAAGCGPASP*QWCAHCCPAGA
Trigger: TGCACCTGCAGGACAACAATGTGCGCACCATTGCCAGGGACTCGCTGGCCCGCATCCCGCTGCTGGAGAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CCA 72 bp AGCGTGTGCGGCAGCCCCGAGGGGATGCTGCTCAGGTaGTTCCGGCTCAGGAAGAGCAGCTTGAGCTGTTTG +
Preference number: 6 (lower is better)
Translates to: SVCGSPEGMLLR*FRLRKSSLSCL
Trigger: CAAACAGCTCAAGCTGCTCTTCCTGAGCCGGAACCACCTGAGCAGCATCCCCTCGGGGCTGCCGCACACGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CCA 72 bp CTGCCGTCAGGGCCTTCACGTGGATGGCCAGGGTCTTaGCGCCATCACCCGTGGCCATGGGGTAGTCAATGT +
Preference number: 6 (lower is better)
Translates to: LPSGPSRGWPGS*RHHPWPWGSQC
Trigger: ACATTGACTACCCCATGGCCACGGGTGATGGCGCCAAGACCCTGGCCATCCACGTGAAGGCCCTGACGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CAA 90 bp AGCAGGTTACCGTCCAGCACCAGGCGCCGCAGGCTGTTGAGGCCCTaGAAGGCATGCAGCGGGATGGTGGAGATGCGGTTGTCATCCAGC +
Preference number: 6 (lower is better)
Translates to: SRLPSSTRRRRLLRP*KACSGMVEMRLSSS
Trigger: GCTGGATGACAACCGCATCTCCACCATCCCGCTGCATGCCTTCAAGGGCCTCAACAGCCTGCGGCGCCTGGTGCTGGACGGTAACCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CAA 90 bp CCCGAGGGGATGCTGCTCAGGTGGTTCCGGCTCAGGAAGAGCAGCTaGAGCTGTTTGCTGTCGGCGAAGGCGTCCTCCTCAATGCTGACG +
Preference number: 6 (lower is better)
Translates to: PEGMLLRWFRLRKSS*SCLLSAKASSSMLT
Trigger: CGTCAGCATTGAGGAGGACGCCTTCGCCGACAGCAAACAGCTCAAGCTGCTCTTCCTGAGCCGGAACCACCTGAGCAGCATCCCCTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CAA 90 bp CTGCTGCCGTTGGAGGGGAAGATAGTGTGGACCACGTACTCTTCTTaGGCGCGGTACGGGTTGATGGGCAGCATCTGCAGCCCAGGGCCG +
Preference number: 6 (lower is better)
Translates to: LLPLEGKIVWTTYSS*ARYGLMGSICSPGP
Trigger: CGGCCCTGGGCTGCAGATGCTGCCCATCAACCCGTACCGCGCCAAAGAAGAGTACGTGGTCCACACTATCTTCCCCTCCAACGGCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS TCA 72 bp CCGGTGCCTCGGTATCCTGGTCTCCTGGCGTTCAGATaGGGCTGTGGGCCACAATCAGCAGCCTCCTTGGCA +
Preference number: 6 (lower is better)
Translates to: PVPRYPGLLAFR*GCGPQSAASLA
Trigger: TGCCAAGGAGGCTGCTGATTGTGGCCCACAGCCTCATCTGAACGCCAGGAGACCAGGATACCGAGGCACCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CAA 72 bp GTGTGGACCACGTACTCTTCTTTGGCGCGGTACGGGTaGATGGGCAGCATCTGCAGCCCAGGGCCGCGGATT +
Preference number: 6 (lower is better)
Translates to: VWTTYSSLARYG*MGSICSPGPRI
Trigger: AATCCGCGGCCCTGGGCTGCAGATGCTGCCCATCAACCCGTACCGCGCCAAAGAAGAGTACGTGGTCCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS GCA 72 bp CTGAGAGGGAGCCACTCTCCAAAGGCTCTGTATTCCTaGCACTCAGGCTGTGTCTCCGGGGGAAAGGAGGGG +
Preference number: 6 (lower is better)
Translates to: LRGSHSPKALYS*HSGCVSGGKEG
Trigger: CCCCTCCTTTCCCCCGGAGACACAGCCTGAGTGGCAGGAATACAGAGCCTTTGGAGAGTGGCTCCCTCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CCA 72 bp TCGGTATCCTGGTCTCCTGGCGTTCAGATGAGGCTGTaGGCCACAATCAGCAGCCTCCTTGGCACCCTAGGC +
Preference number: 6 (lower is better)
Translates to: SVSWSPGVQMRL*ATISSLLGTLG
Trigger: GCCTAGGGTGCCAAGGAGGCTGCTGATTGTGGCCCACAGCCTCATCTGAACGCCAGGAGACCAGGATACCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CAA 90 bp ATGCTGCTCAGGTGGTTCCGGCTCAGGAAGAGCAGCTTGAGCTGTTaGCTGTCGGCGAAGGCGTCCTCCTCAATGCTGACGGTGGACACG +
Preference number: 6 (lower is better)
Translates to: MLLRWFRLRKSSLSC*LSAKASSSMLTVDT
Trigger: CGTGTCCACCGTCAGCATTGAGGAGGACGCCTTCGCCGACAGCAAACAGCTCAAGCTGCTCTTCCTGAGCCGGAACCACCTGAGCAGCAT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CAA 90 bp GGGAAGATAGTGTGGACCACGTACTCTTCTTTGGCGCGGTACGGGTaGATGGGCAGCATCTGCAGCCCAGGGCCGCGGATTTCCAGGATG +
Preference number: 6 (lower is better)
Translates to: GKIVWTTYSSLARYG*MGSICSPGPRISRM
Trigger: CATCCTGGAAATCCGCGGCCCTGGGCTGCAGATGCTGCCCATCAACCCGTACCGCGCCAAAGAAGAGTACGTGGTCCACACTATCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS GCA 72 bp TCTTCTTTGGCGCGGTACGGGTTGATGGGCAGCATCTaGAGCCCAGGGCCGCGGATTTCCAGGATGGAGTTA +
Preference number: 6 (lower is better)
Translates to: SSLARYGLMGSI*SPGPRISRMEL
Trigger: TAACTCCATCCTGGAAATCCGCGGCCCTGGGCTGCAGATGCTGCCCATCAACCCGTACCGCGCCAAAGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CAA 72 bp AGGTGGTTCCGGCTCAGGAAGAGCAGCTTGAGCTGTTaGCTGTCGGCGAAGGCGTCCTCCTCAATGCTGACG +
Preference number: 6 (lower is better)
Translates to: RWFRLRKSSLSC*LSAKASSSMLT
Trigger: CGTCAGCATTGAGGAGGACGCCTTCGCCGACAGCAAACAGCTCAAGCTGCTCTTCCTGAGCCGGAACCACCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS GCA 72 bp ACCTCCACAGCCCTTTTCAACTCTTGCCCTTTTGTCTaGAGCCCGCCACCTCTTCTGAAGGGCCTCTGCGTG +
Preference number: 6 (lower is better)
Translates to: TSTALFNSCPFV*SPPPLLKGLCV
Trigger: CACGCAGAGGCCCTTCAGAAGAGGTGGCGGGCTGCAGACAAAAGGGCAAGAGTTGAAAAGGGCTGTGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS GCA 72 bp CTGCAGGTAGAGGGTGGTGGCATCATCAGGGATATCTaGGGGGATGGATGTGAGTCCCCGGTCGTTGCAGTA +
Preference number: 6 (lower is better)
Translates to: LQVEGGGIIRDI*GDGCESPVVAV
Trigger: TACTGCAACGACCGGGGACTCACATCCATCCCCGCAGATATCCCTGATGATGCCACCACCCTCTACCTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS GCA 72 bp GAGTGTGGTGGTAGGGCCATAGCTGTCGGCTGTCTCTaGCTTGGCACACACGGGTGTCTCATCAGCTACGTA +
Preference number: 6 (lower is better)
Translates to: ECGGRAIAVGCL*LGTHGCLISYV
Trigger: TACGTAGCTGATGAGACACCCGTGTGTGCCAAGGCAGAGACAGCCGACAGCTATGGCCCTACCACCACACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CCA 72 bp TTGCAGAGGCTGCTGCCGTTGGAGGGGAAGATAGTGTaGACCACGTACTCTTCTTTGGCGCGGTACGGGTTG +
Preference number: 6 (lower is better)
Translates to: LQRLLPLEGKIV*TTYSSLARYGL
Trigger: CAACCCGTACCGCGCCAAAGAAGAGTACGTGGTCCACACTATCTTCCCCTCCAACGGCAGCAGCCTCTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CAA 72 bp GTCTCAAAACACTCGTCCATCTCGCTGGTAATGTCCTaGATGGCCATGCCCCGGACCTTCTCAGGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: VSKHSSISLVMS*MAMPRTFSGPW
Trigger: CCAGGGCCCTGAGAAGGTCCGGGGCATGGCCATCAAGGACATTACCAGCGAGATGGACGAGTGTTTTGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS GCA 72 bp CACTTGGCAGAATGGGCTGGGTGCAGAGAGTGTTCTTaGATGACGGAGCTGAGAGGGAGCCACTCTCCAAAG +
Preference number: 6 (lower is better)
Translates to: HLAEWAGCRECS*MTELRGSHSPK
Trigger: CTTTGGAGAGTGGCTCCCTCTCAGCTCCGTCATGCAAGAACACTCTCTGCACCCAGCCCATTCTGCCAAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CAA 72 bp TTGGAGGGGAAGATAGTGTGGACCACGTACTCTTCTTaGGCGCGGTACGGGTTGATGGGCAGCATCTGCAGC +
Preference number: 6 (lower is better)
Translates to: LEGKIVWTTYSS*ARYGLMGSICS
Trigger: GCTGCAGATGCTGCCCATCAACCCGTACCGCGCCAAAGAAGAGTACGTGGTCCACACTATCTTCCCCTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CAA 90 bp TCCTTTAAGTCACTTGGCAGAATGGGCTGGGTGCAGAGAGTGTTCTaGCATGACGGAGCTGAGAGGGAGCCACTCTCCAAAGGCTCTGTA +
Preference number: 6 (lower is better)
Translates to: SFKSLGRMGWVQRVF*HDGAEREPLSKGSV
Trigger: TACAGAGCCTTTGGAGAGTGGCTCCCTCTCAGCTCCGTCATGCAAGAACACTCTCTGCACCCAGCCCATTCTGCCAAGTGACTTAAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CAA 90 bp TGGGGAGGTAGGGAGGATGAGTTATTCCCGCTTCACTCTCTGGTCTaGTCTGTCCAAAAAGGAATCCATCTTCTCGCCCACTGCCTGCTT +
Preference number: 6 (lower is better)
Translates to: WGGREDELFPLHSLV*SVQKGIHLLAHCLL
Trigger: AAGCAGGCAGTGGGCGAGAAGATGGATTCCTTTTTGGACAGACAAGACCAGAGAGTGAAGCGGGAATAACTCATCCTCCCTACCTCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS GCA 72 bp TTAATTCCTTTAAGTCACTTGGCAGAATGGGCTGGGTaGAGAGAGTGTTCTTGCATGACGGAGCTGAGAGGG +
Preference number: 6 (lower is better)
Translates to: LIPLSHLAEWAG*RECSCMTELRG
Trigger: CCCTCTCAGCTCCGTCATGCAAGAACACTCTCTGCACCCAGCCCATTCTGCCAAGTGACTTAAAGGAATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CAA 72 bp AGGGAGGATGAGTTATTCCCGCTTCACTCTCTGGTCTaGTCTGTCCAAAAAGGAATCCATCTTCTCGCCCAC +
Preference number: 6 (lower is better)
Translates to: REDELFPLHSLV*SVQKGIHLLAH
Trigger: GTGGGCGAGAAGATGGATTCCTTTTTGGACAGACAAGACCAGAGAGTGAAGCGGGAATAACTCATCCTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1
CDS CCA 72 bp GAGGTAGGGAGGATGAGTTATTCCCGCTTCACTCTCTaGTCTTGTCTGTCCAAAAAGGAATCCATCTTCTCG +
Preference number: 6 (lower is better)
Translates to: EVGRMSYSRFTL*SCLSKKESIFS
Trigger: CGAGAAGATGGATTCCTTTTTGGACAGACAAGACCAGAGAGTGAAGCGGGAATAACTCATCCTCCCTACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246841.3
ENST00000682287.1