RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FLOT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000132589

Ensembl transcript IDs: ENST00000394906.6, ENST00000394908.9, ENST00000577789.5, ENST00000580313.5, ENST00000580805.5, ENST00000581509.1, ENST00000582174.5, ENST00000584569.1, ENST00000585169.5, ENST00000586827.6, ENST00000593158.1

Found 665 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGACCTGCTTCACCTTTTCACCCTCGGCAATCTGCTGGATGCGGTaGGCCTCGGCCTCGGCAGGCCGGCGCACTGTAGCGATGAGCTCC +
Preference number: 1 (lower is better)
Translates to: RTCFTFSPSAICWMR*ASASAGRRTVAMSS
Trigger: GGAGCTCATCGCTACAGTGCGCCGGCCTGCCGAGGCCGAGGCCCACCGCATCCAGCAGATTGCCGAGGGTGAAAAGGTGAAGCAGGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR GCA 90 bp GGGCCAGGGTGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTaGCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTCCATTGGAGCA +
Preference number: 1 (lower is better)
Translates to: GPGWGAGTTGHSQHP*QDAWVLGSSASIGA
Trigger: TGCTCCAATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCACCCTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR CCA 90 bp TGTGCCCTTGGGGTCAGGGAGAAAGGACAGGGTATGAGCGCTGGCTaGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCTCTGGGCCCT +
Preference number: 1 (lower is better)
Translates to: CALGVREKGQGMSAG*GLGWMRGRTVSLGP
Trigger: AGGGCCCAGAGACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACCCTGTCCTTTCTCCCTGACCCCAAGGGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR CCA 90 bp TGCCCATGCGGCCAACATCAGGGGCTGCCACCTCCCGCACCAGCTTaGCAAACTGGTCCCGGTCCTGATAAATCTGCTCCACTGTCAGGG +
Preference number: 1 (lower is better)
Translates to: CPCGQHQGLPPPAPA*QTGPGPDKSAPLSG
Trigger: CCCTGACAGTGGAGCAGATTTATCAGGACCGGGACCAGTTTGCCAAGCTGGTGCGGGAGGTGGCAGCCCCTGATGTTGGCCGCATGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580805.5
3UTR GCA 90 bp GGTGAAGCTGAGGATCTCAATGCCCATGCGGCCAACATCAGGGGCTaGCACCTCCCGCACCAGCTTGGCAAACTGGTCCCGGTCCTGATA +
Preference number: 1 (lower is better)
Translates to: GEAEDLNAHAANIRG*HLPHQLGKLVPVLI
Trigger: TATCAGGACCGGGACCAGTTTGCCAAGCTGGTGCGGGAGGTGGCAGCCCCTGATGTTGGCCGCATGGGCATTGAGATCCTCAGCTTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580805.5
3UTR GCA 90 bp GCCGGGTGGCTGCTGAAGAGAGTGGGCCTGCAGGAGCCTCACACCTaGACACCAGTGGCCTTCTTGATCAGGGGTATCTTAGACAGGTCC +
Preference number: 1 (lower is better)
Translates to: AGWLLKRVGLQEPHT*TPVAFLIRGILDRS
Trigger: GGACCTGTCTAAGATACCCCTGATCAAGAAGGCCACTGGTGTGCAGGTGTGAGGCTCCTGCAGGCCCACTCTCTTCAGCAGCCACCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580805.5
3UTR CCA 90 bp GGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTaGGTCCTGGGCTCTTCTGCCTCCATTGGAGCAAGGAGACAGAGG +
Preference number: 1 (lower is better)
Translates to: GAGTTGHSQHPCQDA*VLGSSASIGARRQR
Trigger: CCTCTGTCTCCTTGCTCCAATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR GCA 90 bp GTATTTCTGGTAGGCTTCTGCCTTGAGCTTCATCCGCTCAGCCTCTaGCTTGCCCATCGCCTCGATGACTGCCGCTTCCGCCTCCCCGAT +
Preference number: 1 (lower is better)
Translates to: VFLVGFCLELHPLSL*LAHRLDDCRFRLPD
Trigger: ATCGGGGAGGCGGAAGCGGCAGTCATCGAGGCGATGGGCAAGGCAGAGGCTGAGCGGATGAAGCTCAAGGCAGAAGCCTACCAGAAATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR CCA 90 bp GCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTCCATTaGAGCAAGGAGACAGAGGATTGGGTTGCTTCCCCATGGCTGGAA +
Preference number: 1 (lower is better)
Translates to: APLPRRLGPGLFCLH*SKETEDWVASPWLE
Trigger: TTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCTCCTTGCTCCAATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR CCA 90 bp GGAACCCCATCACTCTGGCCAGGAAGAAAGATGGCACAAGGGCTCTaGGGTCTGGCCAGGCTACAGCACTCGATTCTGTACAGGGTTGGC +
Preference number: 1 (lower is better)
Translates to: GTPSLWPGRKMAQGL*GLARLQHSILYRVG
Trigger: GCCAACCCTGTACAGAATCGAGTGCTGTAGCCTGGCCAGACCCCAGAGCCCTTGTGCCATCTTTCTTCCTGGCCAGAGTGATGGGGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR CCA 90 bp GGTCCTGGGCTCTTCTGCCTCCATTGGAGCAAGGAGACAGAGGATTaGGTTGCTTCCCCATGGCTGGAACCCCATCACTCTGGCCAGGAA +
Preference number: 1 (lower is better)
Translates to: GPGLFCLHWSKETED*VASPWLEPHHSGQE
Trigger: TTCCTGGCCAGAGTGATGGGGTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCTCCTTGCTCCAATGGAGGCAGAAGAGCCCAGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR CCA 90 bp GGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTaGGCTCTTCTGCCTCCATTGGAGCAAGGAGACAGAGGATTGGGT +
Preference number: 1 (lower is better)
Translates to: GPLDIHSTPAKTLGS*ALLPPLEQGDRGLG
Trigger: ACCCAATCCTCTGTCTCCTTGCTCCAATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR GCA 90 bp ACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTaGCTCCATTGGAGCAAGGAGACAGAGGATTGGGTTGCTTCCCCA +
Preference number: 1 (lower is better)
Translates to: TFTAPLPRRLGPGLF*LHWSKETEDWVASP
Trigger: TGGGGAAGCAACCCAATCCTCTGTCTCCTTGCTCCAATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR GCA 90 bp GTTGGCACAGCCTTGTCCACCAGAAGGGCCCAACACCCAGGACAGTaGAGCCCTAGCAGGAAGAAGGTCTACACACTTTTCTGTCCCCAA +
Preference number: 1 (lower is better)
Translates to: VGTALSTRRAQHPGQ*SPSRKKVYTLFCPQ
Trigger: TTGGGGACAGAAAAGTGTGTAGACCTTCTTCCTGCTAGGGCTGCACTGTCCTGGGTGTTGGGCCCTTCTGGTGGACAAGGCTGTGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR GCA 90 bp TGGGCTCTTCTGCCTCCATTGGAGCAAGGAGACAGAGGATTGGGTTaGTTCCCCATGGCTGGAACCCCATCACTCTGGCCAGGAAGAAAG +
Preference number: 1 (lower is better)
Translates to: WALLPPLEQGDRGLG*FPMAGTPSLWPGRK
Trigger: CTTTCTTCCTGGCCAGAGTGATGGGGTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCTCCTTGCTCCAATGGAGGCAGAAGAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR GCA 90 bp GCGCACTGTAGCGATGAGCTCCTTGTCCGTACGCAGGATCTCCTGTaGCTCCACGGCAATCTGTTTCTTGCGCTGCACAACCTCAATCTC +
Preference number: 1 (lower is better)
Translates to: AHCSDELLVRTQDLL*LHGNLFLALHNLNL
Trigger: GAGATTGAGGTTGTGCAGCGCAAGAAACAGATTGCCGTGGAGGCACAGGAGATCCTGCGTACGGACAAGGAGCTCATCGCTACAGTGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR GCA 90 bp TTCTTGATCAGGGGTATCTTAGACAGGTCCACGCCTGTGAGGGCATaGACAGAGGCAGGCAGCTCGGCCAGCAGTCGGTTCACTTCTGAT +
Preference number: 1 (lower is better)
Translates to: FLIRGILDRSTPVRA*TEAGSSASSRFTSD
Trigger: ATCAGAAGTGAACCGACTGCTGGCCGAGCTGCCTGCCTCTGTGCATGCCCTCACAGGCGTGGACCTGTCTAAGATACCCCTGATCAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR TCA 90 bp GGCATGCACAGAGGCAGGCAGCTCGGCCAGCAGTCGGTTCACTTCTaGTGTGACCTTACTGTTGTCTCCACTGAGGACCACAATCTCATC +
Preference number: 1 (lower is better)
Translates to: GMHRGRQLGQQSVHF*CDLTVVSTEDHNLI
Trigger: GATGAGATTGTGGTCCTCAGTGGAGACAACAGTAAGGTCACATCAGAAGTGAACCGACTGCTGGCCGAGCTGCCTGCCTCTGTGCATGCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR GCA 90 bp ACTGTCAGGGTCCCGAGGATGGAGCGCAGATGTCCCTCCAGGGTCTaGAGGACGACGTTTTTGATGTCCTGCACATTCTTACCCAGAAAC +
Preference number: 1 (lower is better)
Translates to: TVRVPRMERRCPSRV*RTTFLMSCTFLPRN
Trigger: GTTTCTGGGTAAGAATGTGCAGGACATCAAAAACGTCGTCCTGCAGACCCTGGAGGGACATCTGCGCTCCATCCTCGGGACCCTGACAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580805.5
3UTR CCA 90 bp TCCATTGGAGCAAGGAGACAGAGGATTGGGTTGCTTCCCCATGGCTaGAACCCCATCACTCTGGCCAGGAAGAAAGATGGCACAAGGGCT +
Preference number: 1 (lower is better)
Translates to: SIGARRQRIGLLPHG*NPITLARKKDGTRA
Trigger: AGCCCTTGTGCCATCTTTCTTCCTGGCCAGAGTGATGGGGTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCTCCTTGCTCCAATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR CCA 90 bp TGCCTCCATTGGAGCAAGGAGACAGAGGATTGGGTTGCTTCCCCATaGCTGGAACCCCATCACTCTGGCCAGGAAGAAAGATGGCACAAG +
Preference number: 1 (lower is better)
Translates to: CLHWSKETEDWVASP*LEPHHSGQEERWHK
Trigger: CTTGTGCCATCTTTCTTCCTGGCCAGAGTGATGGGGTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCTCCTTGCTCCAATGGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR CCA 90 bp AGAGACAGGAAGACAGCCAGAGATGGCCTGAACACGCAGCACTTCTaGTCCCTTCGAGATAAGGCACCAGAGTCAGTAACGTTCCCGTTG +
Preference number: 1 (lower is better)
Translates to: RDRKTARDGLNTQHF*SLRDKAPESVTFPL
Trigger: CAACGGGAACGTTACTGACTCTGGTGCCTTATCTCGAAGGGACCAGAAGTGCTGCGTGTTCAGGCCATCTCTGGCTGTCTTCCTGTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR CCA 90 bp GAAAGTGGCAGTGAAAGTGGGGTAAAGGAGAGGAAGAGGAGGAGGTaGACAGACAGGAGAGACAGGAAGACAGCCAGAGATGGCCTGAAC +
Preference number: 1 (lower is better)
Translates to: ESGSESGVKERKRRR*TDRRDRKTARDGLN
Trigger: GTTCAGGCCATCTCTGGCTGTCTTCCTGTCTCTCCTGTCTGTCCACCTCCTCCTCTTCCTCTCCTTTACCCCACTTTCACTGCCACTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR GCA 90 bp GTACGCAGGATCTCCTGTGCCTCCACGGCAATCTGTTTCTTGCGCTaGACAACCTCAATCTCAATCTCTTCCTGCCGGATCTTCTGCTGT +
Preference number: 1 (lower is better)
Translates to: VRRISCASTAICFLR*TTSISISSCRIFCC
Trigger: ACAGCAGAAGATCCGGCAGGAAGAGATTGAGATTGAGGTTGTGCAGCGCAAGAAACAGATTGCCGTGGAGGCACAGGAGATCCTGCGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR GCA 90 bp TGTCCGTACGCAGGATCTCCTGTGCCTCCACGGCAATCTGTTTCTTaGGCTGCACAACCTCAATCTCAATCTCTTCCTGCCGGATCTTCT +
Preference number: 1 (lower is better)
Translates to: CPYAGSPVPPRQSVS*AAQPQSQSLPAGSS
Trigger: AGAAGATCCGGCAGGAAGAGATTGAGATTGAGGTTGTGCAGCGCAAGAAACAGATTGCCGTGGAGGCACAGGAGATCCTGCGTACGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR GCA 90 bp GCCTCAGCTGTCTTGATGTTAACCTCCTCACTGAAGGCTGACTTTTaGAGCTCGAAGGCTCGCTTAGAGTCAGCAATCTTGGTGTCTGCC +
Preference number: 1 (lower is better)
Translates to: ASAVLMLTSSLKADF*SSKARLESAILVSA
Trigger: GGCAGACACCAAGATTGCTGACTCTAAGCGAGCCTTCGAGCTGCAAAAGTCAGCCTTCAGTGAGGAGGTTAACATCAAGACAGCTGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR TCA 90 bp CAACTGGGCCTCAGCTGTCTTGATGTTAACCTCCTCACTGAAGGCTaGCTTTTGCAGCTCGAAGGCTCGCTTAGAGTCAGCAATCTTGGT +
Preference number: 1 (lower is better)
Translates to: QLGLSCLDVNLLTEG*LLQLEGSLRVSNLG
Trigger: ACCAAGATTGCTGACTCTAAGCGAGCCTTCGAGCTGCAAAAGTCAGCCTTCAGTGAGGAGGTTAACATCAAGACAGCTGAGGCCCAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR-3UTR GCA 90 bp CTGGGCCCTGCAGGTCATGGCTGCCCAGACCTAGAGGGGCAGCAGCAGGTGAGGGCCAACATCAGGGGCTaGCACCTCCCGCACCAGCTT +
Preference number: 2 (lower is better)
Translates to: LGPAGHGCPDLEGQQQVRANIRG*HLPHQL
Trigger: AAGCTGGTGCGGGAGGTGGCAGCCCCTGATGTTGGC...CCTCACCTGCTGCTGCCCCTCTAGGTCTGGGCAGCCATGACCTGCAGGGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580805.5
3UTR-3UTR CCA 90 bp TCCCGGATGCCTGCGTCCCGTTCAGCCTCGGCCACGCCAATGTCAGCATCTCTCGGAGGGAGGGCCGGGTaGCTGCTGAAGAGAGTGGGC +
Preference number: 2 (lower is better)
Translates to: SRMPASRSASATPMSASLGGRAG*LLKRVG
Trigger: GCCCACTCTCTTCAGCAGCCACCCGGCCCTCCCTCC...GAGAGATGCTGACATTGGCGTGGCCGAGGCTGAACGGGACGCAGGCATCCGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580805.5
3UTR-3UTR CCA 90 bp CTGGGCCCTGCAGGTCATGGCTGCCCAGACCTAGAGGGGCAGCAGCAGGTGAGGCCTCCCGCACCAGCTTaGCAAACTGGTCCCGGTCCT +
Preference number: 2 (lower is better)
Translates to: LGPAGHGCPDLEGQQQVRPPAPA*QTGPGP
Trigger: AGGACCGGGACCAGTTTGCCAAGCTGGTGCGGGAGG...CCTCACCTGCTGCTGCCCCTCTAGGTCTGGGCAGCCATGACCTGCAGGGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580805.5
3UTR-3UTR GCA 90 bp GGCAATCTGCTGGATGCGGTGGGCCTCGGCCTCGGCAGGCCGGCGCACTGTAGCCCAGCATCTCCTTCTTaGACTCAGCTTCCCGGATGC +
Preference number: 2 (lower is better)
Translates to: GNLLDAVGLGLGRPAHCSPASPS*TQLPGC
Trigger: GCATCCGGGAAGCTGAGTGCAAGAAGGAGATGCTGG...GCTACAGTGCGCCGGCCTGCCGAGGCCGAGGCCCACCGCATCCAGCAGATTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR-3UTR CCA 90 bp TGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCGGAGGGAGGGCCGGGTaGCTGCTGAAGAGAGTGGGC +
Preference number: 2 (lower is better)
Translates to: WGAGTTGHSQHPCQDAWVGGRAG*LLKRVG
Trigger: GCCCACTCTCTTCAGCAGCCACCCGGCCCTCCCTCC...GACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR CAA 90 bp TGGGCCTCGGCCTCGGCAGGCCGGCGCACTGTAGCGATGAGCTCCTaGTCCGTACGCAGGATCTCCTGTGCCTCCACGGCAATCTGTTTC +
Preference number: 2 (lower is better)
Translates to: WASASAGRRTVAMSS*SVRRISCASTAICF
Trigger: GAAACAGATTGCCGTGGAGGCACAGGAGATCCTGCGTACGGACAAGGAGCTCATCGCTACAGTGCGCCGGCCTGCCGAGGCCGAGGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR-3UTR TCA 90 bp CCCAGACCAGACATGCAGCATCCACATGCAGGAAGAGCTACACAGGCTGGGGCAGGGCCGGGTGGCTGCTaGAGAGAGTGGGCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: PRPDMQHPHAGRATQAGAGPGGC*REWACR
Trigger: CCTGCAGGCCCACTCTCTTCAGCAGCCACCCGGCCC...TGCCCCAGCCTGTGTAGCTCTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR TCA 90 bp TGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGGGGCCGGGTGGCTGCTaGAGAGAGTGGGCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: WGSATSKPQTRHAASTCRGPGGC*REWACR
Trigger: CCTGCAGGCCCACTCTCTTCAGCAGCCACCCGGCCC...CCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR TCA 90 bp CCAGGGTGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTGGGGCCTTGGGTGGATaGGGGGAAGGACAGTGTCTC +
Preference number: 2 (lower is better)
Translates to: PGWGAGTTGHSQHPCQDAGALGG*GEGQCL
Trigger: GAGACACTGTCCTTCCCCTCATCCACCCAAGGCCCC...AGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCACCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR GCA 90 bp GGGTGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGCCTGCAGGTCATGGCTaGCCAGACCTAGAGGGGCAG +
Preference number: 2 (lower is better)
Translates to: GWGAGTTGHSQHPCQDAWPAGHG*PDLEGQ
Trigger: CTGCCCCTCTAGGTCTGGGCAGCCATGACCTGCAGG...CCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR CCA 90 bp CCAGGGTGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTGGTATGAGCGCTGGCTaGGGCCTTGGGTGGATGAGG +
Preference number: 2 (lower is better)
Translates to: PGWGAGTTGHSQHPCQDAGMSAG*GLGWMR
Trigger: CCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACC...AGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCACCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR GCA 90 bp GGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCAGTGTCTCTGGGCCCTaGAGGTCATGGCTGCCCAGA +
Preference number: 2 (lower is better)
Translates to: GELGPLDIHSTPAKTLGSSVSGP*RSWLPR
Trigger: TCTGGGCAGCCATGACCTGCAGGGCCCAGAGACACT...GGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR GCA 90 bp CTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTAGCTTCCCGGATGCCTaGGTCCCGTTCAGCCTCGGC +
Preference number: 2 (lower is better)
Translates to: LDIHSTPAKTLGSWALLPSFPDA*VPFSLG
Trigger: GCCGAGGCTGAACGGGACGCAGGCATCCGGGAAGCT...AGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580805.5
3UTR-3UTR CCA 90 bp AGACAGAGGATTGGGTTGCTTCCCCATGGCTGGAACCCCATCACTCTGGCCAGGGGAGGGAGGGCCGGGTaGCTGCTGAAGAGAGTGGGC +
Preference number: 2 (lower is better)
Translates to: RQRIGLLPHGWNPITLARGGRAG*LLKRVG
Trigger: GCCCACTCTCTTCAGCAGCCACCCGGCCCTCCCTCC...CCTGGCCAGAGTGATGGGGTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR CCA 90 bp CCAGGGTGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTACAGGGTATGAGCGCTaGCTGGGGCCTTGGGTGGAT +
Preference number: 2 (lower is better)
Translates to: PGWGAGTTGHSQHPCQDATGYER*LGPWVD
Trigger: ATCCACCCAAGGCCCCAGCCAGCGCTCATACCCTGT...AGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCACCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR CCA 90 bp TGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCCCTGCCAAGACGCTTaGGTCCTGGGCTCTTCTGCC +
Preference number: 2 (lower is better)
Translates to: WGAGTTGHSQHPCQDAWVPCQDA*VLGSSA
Trigger: GGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGG...GACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR CAA 90 bp GCCTTGCCCATCGCCTCGATGACTGCCGCTTCCGCCTCCCCGATTTaGCGGATCTTCTCAGCCTCTGCCTGTGCCAAGAGGACCTGCTTC +
Preference number: 2 (lower is better)
Translates to: ALPIASMTAASASPI*RIFSASACAKRTCF
Trigger: GAAGCAGGTCCTCTTGGCACAGGCAGAGGCTGAGAAGATCCGCAAAATCGGGGAGGCGGAAGCGGCAGTCATCGAGGCGATGGGCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR-3UTR TCA 90 bp ACAGGGTATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCCAGGAGAGAGGACAGTaGCCGTCCTACCCAGAACCC +
Preference number: 2 (lower is better)
Translates to: TGYERWLGPWVDEGKDSVQERGQ*PSYPEP
Trigger: GGGTTCTGGGTAGGACGGTCACTGTCCTCTCTCCTG...GACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR GCA 90 bp ATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCTCTGGGCGGTCCTGGGCTCTTCTaGCTCCATTGGAGCAAGGAG +
Preference number: 2 (lower is better)
Translates to: MSAGWGLGWMRGRTVSLGGPGLF*LHWSKE
Trigger: CTCCTTGCTCCAATGGAGGCAGAAGAGCCCAGGACC...GCCCAGAGACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR GCA 90 bp GGGTGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGCTCAGCCTCTGCCTGTaGCAAGAGGACCTGCTTCAC +
Preference number: 2 (lower is better)
Translates to: GWGAGTTGHSQHPCQDAWLSLCL*QEDLLH
Trigger: GTGAAGCAGGTCCTCTTGGCACAGGCAGAGGCTGAG...CCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580805.5
3UTR-3UTR CCA 90 bp AGGAGACAGAGGATTGGGTTGCTTCCCCATGGCTGGAACCCCATCACTCTGGCCCGCTGGCTGGGGCCTTaGGTGGATGAGGGGAAGGAC +
Preference number: 2 (lower is better)
Translates to: RRQRIGLLPHGWNPITLARWLGP*VDEGKD
Trigger: GTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCG...GGCCAGAGTGATGGGGTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR CCA 90 bp CAGTGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCCGCTGGCTGGGGCCTTaGGTGGATGAGGGGAAGGAC +
Preference number: 2 (lower is better)
Translates to: QWGSATSKPQTRHAASTCRWLGP*VDEGKD
Trigger: GTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCG...GCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR CAA 90 bp CTGGCCAGGCTACAGCACTCGATTCTGTACAGGGTTGGCACAGCCTaGTCCACCAGAAGGGCCCAACACCCAGGACAGTGCAGCCCTAGC +
Preference number: 2 (lower is better)
Translates to: LARLQHSILYRVGTA*STRRAQHPGQCSPS
Trigger: GCTAGGGCTGCACTGTCCTGGGTGTTGGGCCCTTCTGGTGGACAAGGCTGTGCCAACCCTGTACAGAATCGAGTGCTGTAGCCTGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR CAA 90 bp GGCTCTGGGGTCTGGCCAGGCTACAGCACTCGATTCTGTACAGGGTaGGCACAGCCTTGTCCACCAGAAGGGCCCAACACCCAGGACAGT +
Preference number: 2 (lower is better)
Translates to: GSGVWPGYSTRFCTG*AQPCPPEGPNTQDS
Trigger: ACTGTCCTGGGTGTTGGGCCCTTCTGGTGGACAAGGCTGTGCCAACCCTGTACAGAATCGAGTGCTGTAGCCTGGCCAGACCCCAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR CAA 90 bp GGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTaGGGTCCTGGGCTCTTCTGCCTCCATTGGAGCAAGGAGACAGAG +
Preference number: 2 (lower is better)
Translates to: GSWDHWTFTAPLPRR*GPGLFCLHWSKETE
Trigger: CTCTGTCTCCTTGCTCCAATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR TCA 90 bp AGACAGAGGATTGGGTTGCTTCCCCATGGCTGGAACCCCATCACTCTGGCCAGGGGGGCCTTGGGTGGATaGGGGGAAGGACAGTGTCTC +
Preference number: 2 (lower is better)
Translates to: RQRIGLLPHGWNPITLARGALGG*GEGQCL
Trigger: GAGACACTGTCCTTCCCCTCATCCACCCAAGGCCCC...CCTGGCCAGAGTGATGGGGTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR GCA 90 bp ACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCGTAGACAGGAGGCCTTaGCTCTGTGCCCTTGGGGTC +
Preference number: 2 (lower is better)
Translates to: TGHSQHPCQDAWVLGSSAVDRRP*LCALGV
Trigger: GACCCCAAGGGCACAGAGGCAAGGCCTCCTGTCTAC...GGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR GCA 90 bp TGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCATTCACAGCACCCCTaGCAAGACGCTTGGGTCCTG +
Preference number: 2 (lower is better)
Translates to: WGAGTTGHSQHPCQDAWVHSQHP*QDAWVL
Trigger: CAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATG...GACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR GCA 90 bp GGGTATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCTCTGGATCTCAATGCCCATaGGGCCAACATCAGGGGCTG +
Preference number: 2 (lower is better)
Translates to: GYERWLGPWVDEGKDSVSGSQCP*GQHQGL
Trigger: CAGCCCCTGATGTTGGCCGCATGGGCATTGAGATCC...AGAGACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580805.5
3UTR-3UTR GCA 90 bp GGGCCTCTAGCACCAAGGCCATCTTGGCTGCATCCCCGTATTTCTGGTAGGCTTAGCTTCCCGGATGCCTaGGTCCCGTTCAGCCTCGGC +
Preference number: 2 (lower is better)
Translates to: GPLAPRPSWLHPRISGRLSFPDA*VPFSLG
Trigger: GCCGAGGCTGAACGGGACGCAGGCATCCGGGAAGCT...AAGCCTACCAGAAATACGGGGATGCAGCCAAGATGGCCTTGGTGCTAGAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR-3UTR CCA 90 bp AAACTTAGCAGAGTTGGGACCAAACCGCACCGCCCCAGCAGGAACATGCCCATGCGCTGGCTGGGGCCTTaGGTGGATGAGGGGAAGGAC +
Preference number: 2 (lower is better)
Translates to: KLSRVGTKPHRPSRNMPMRWLGP*VDEGKD
Trigger: GTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCG...CATGGGCATGTTCCTGCTGGGGCGGTGCGGTTTGGTCCCAACTCTGCTAAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR CCA 90 bp TGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGGGTATGAGCGCTGGCTaGGGCCTTGGGTGGATGAGG +
Preference number: 2 (lower is better)
Translates to: WGSATSKPQTRHAASTCRGMSAG*GLGWMR
Trigger: CCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACC...CCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR CCA 90 bp TGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCTTGCTTCCCCATGGCTaGAACCCCATCACTCTGGCC +
Preference number: 2 (lower is better)
Translates to: WGAGTTGHSQHPCQDAWVLLPHG*NPITLA
Trigger: GGCCAGAGTGATGGGGTTCCAGCCATGGGGAAGCAA...GACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR CCA 90 bp ATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCTCTGGGCTGGGTTGCTTCCCCATaGCTGGAACCCCATCACTCT +
Preference number: 2 (lower is better)
Translates to: MSAGWGLGWMRGRTVSLGWVASP*LEPHHS
Trigger: AGAGTGATGGGGTTCCAGCCATGGGGAAGCAACCCA...GCCCAGAGACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR CCA 90 bp CATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTCCATTCCCTGCCAAGACGCTTaGGTCCTGGGCTCTTCTGCC +
Preference number: 2 (lower is better)
Translates to: HSQHPCQDAWVLGSSASIPCQDA*VLGSSA
Trigger: GGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGG...AATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR CCA 90 bp ATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCTCTGGGCAGAAGGGACAGGCAGTaGGGCAGTGCAACATCCAAG +
Preference number: 2 (lower is better)
Translates to: MSAGWGLGWMRGRTVSLGRRDRQ*GSATSK
Trigger: CTTGGATGTTGCACTGCCCCACTGCCTGTCCCTTCT...GCCCAGAGACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR TCA 90 bp ACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTCCATCAGGAGAGAGGACAGTaGCCGTCCTACCCAGAACCC +
Preference number: 2 (lower is better)
Translates to: TFTAPLPRRLGPGLFCLHQERGQ*PSYPEP
Trigger: GGGTTCTGGGTAGGACGGTCACTGTCCTCTCTCCTG...ATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR TCA 90 bp GCAGTGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAGAGAGGACAGTaGCCGTCCTACCCAGAACCC +
Preference number: 2 (lower is better)
Translates to: AVGQCNIQAPDQTCSIHMQERGQ*PSYPEP
Trigger: GGGTTCTGGGTAGGACGGTCACTGTCCTCTCTCCTG...CATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR TCA 90 bp AGGAGACAGAGGATTGGGTTGCTTCCCCATGGCTGGAACCCCATCACTCTGGCCCAGGAGAGAGGACAGTaGCCGTCCTACCCAGAACCC +
Preference number: 2 (lower is better)
Translates to: RRQRIGLLPHGWNPITLAQERGQ*PSYPEP
Trigger: GGGTTCTGGGTAGGACGGTCACTGTCCTCTCTCCTG...GGCCAGAGTGATGGGGTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR TCA 90 bp CAGGGTATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCTCTCCTCACTGAAGGCTaGCTTTTGCAGCTCGAAGGC +
Preference number: 2 (lower is better)
Translates to: QGMSAGWGLGWMRGRTVSLLTEG*LLQLEG
Trigger: GCCTTCGAGCTGCAAAAGTCAGCCTTCAGTGAGGAG...AGACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580805.5
3UTR-3UTR GCA 90 bp GGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAAGCCTGCAGGTCATGGCTaGCCAGACCTAGAGGGGCAG +
Preference number: 2 (lower is better)
Translates to: GSATSKPQTRHAASTCRKPAGHG*PDLEGQ
Trigger: CTGCCCCTCTAGGTCTGGGCAGCCATGACCTGCAGG...CTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR GCA 90 bp CCCAGACCAGACATGCAGCATCCACATGCAGGAAGAGCTACACAGGCTGGGGCAGAGGCCTTGCCTCTGTaGCCTTGGGGTCAGGGAGAA +
Preference number: 2 (lower is better)
Translates to: PRPDMQHPHAGRATQAGAEALPL*PWGQGE
Trigger: TTCTCCCTGACCCCAAGGGCACAGAGGCAAGGCCTC...TGCCCCAGCCTGTGTAGCTCTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR GCA 90 bp ACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTCCATGTAGACAGGAGGCCTTaGCTCTGTGCCCTTGGGGTC +
Preference number: 2 (lower is better)
Translates to: TFTAPLPRRLGPGLFCLHVDRRP*LCALGV
Trigger: GACCCCAAGGGCACAGAGGCAAGGCCTCCTGTCTAC...ATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR GCA 90 bp TGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCAACACCCAGGACAGTaGAGCCCTAGCAGGAAGAAG +
Preference number: 2 (lower is better)
Translates to: WGAGTTGHSQHPCQDAWVQHPGQ*SPSRKK
Trigger: CTTCTTCCTGCTAGGGCTGCACTGTCCTGGGTGTTG...GACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR GCA 90 bp TGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCGACAGAGGATTGGGTTaGTTCCCCATGGCTGGAACC +
Preference number: 2 (lower is better)
Translates to: WGAGTTGHSQHPCQDAWVDRGLG*FPMAGT
Trigger: GGTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTC...GACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR GCA 90 bp GGCCTCGGCCTCGGCAGGCCGGCGCACTGTAGCGATGAGCTCCTTGTCCGTACGAGCAATCTTGGTGTCTaGCATGAACTTCACATCCAG +
Preference number: 2 (lower is better)
Translates to: GLGLGRPAHCSDELLVRTSNLGV*HELHIQ
Trigger: CTGGATGTGAAGTTCATGGCAGACACCAAGATTGCT...CGTACGGACAAGGAGCTCATCGCTACAGTGCGCCGGCCTGCCGAGGCCGAGGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR-3UTR GCA 90 bp AAACTTAGCAGAGTTGGGACCAAACCGCACCGCCCCAGCAGGAACATGCCCATGTCCTGCCGGATCTTCTaGTGTTCACGGGCCCCCTGC +
Preference number: 2 (lower is better)
Translates to: KLSRVGTKPHRPSRNMPMSCRIF*CSRAPC
Trigger: GCAGGGGGCCCGTGAACAGCAGAAGATCCGGCAGGA...CATGGGCATGTTCCTGCTGGGGCGGTGCGGTTTGGTCCCAACTCTGCTAAGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580805.5
3UTR-3UTR GCA 90 bp TGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAAGAGCTACGGCAATCTGCTGGATaGGGTGGGCCTCGGCCTCGG +
Preference number: 2 (lower is better)
Translates to: CNIQAPDQTCSIHMQEELRQSAG*GGPRPR
Trigger: CCGAGGCCGAGGCCCACCGCATCCAGCAGATTGCCG...TAGCTCTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580805.5
3UTR-3UTR CCA 90 bp GGTCTGGCCAGGCTACAGCACTCGATTCTGTACAGGGTTGGCACAGCCTTGTCCACAGGGTATGAGCGCTaGCTGGGGCCTTGGGTGGAT +
Preference number: 2 (lower is better)
Translates to: GLARLQHSILYRVGTALSTGYER*LGPWVD
Trigger: ATCCACCCAAGGCCCCAGCCAGCGCTCATACCCTGT...GGACAAGGCTGTGCCAACCCTGTACAGAATCGAGTGCTGTAGCCTGGCCAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR CCA 90 bp GGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAAAGGGCTCTGGGGTCTaGCCAGGCTACAGCACTCGA +
Preference number: 2 (lower is better)
Translates to: GAVQHPSPRPDMQHPHAGKGSGV*PGYSTR
Trigger: TCGAGTGCTGTAGCCTGGCCAGACCCCAGAGCCCTT...TCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR CCA 90 bp GGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAATGGCACAAGGGCTCTaGGGTCTGGCCAGGCTACAG +
Preference number: 2 (lower is better)
Translates to: GAVQHPSPRPDMQHPHAGMAQGL*GLARLQ
Trigger: CTGTAGCCTGGCCAGACCCCAGAGCCCTTGTGCCAT...TCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR CCA 90 bp GGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCAAGGAGACAGAGGATTaGGTTGCTTCCCCATGGCTG +
Preference number: 2 (lower is better)
Translates to: GELGPLDIHSTPAKTLGSKETED*VASPWL
Trigger: CAGCCATGGGGAAGCAACCCAATCCTCTGTCTCCTT...GGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR CCA 90 bp CAGTGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCGGGAGCTGGGACCACTaGACATTCACAGCACCCCTG +
Preference number: 2 (lower is better)
Translates to: QWGSATSKPQTRHAASTCGSWDH*TFTAPL
Trigger: CAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCC...GCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR CCA 90 bp TGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCAGAAGGGACAGGCAGTaGGGCAGTGCAACATCCAAG +
Preference number: 2 (lower is better)
Translates to: WGAGTTGHSQHPCQDAWVRRDRQ*GSATSK
Trigger: CTTGGATGTTGCACTGCCCCACTGCCTGTCCCTTCT...GACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR TCA 90 bp CCCAGACCAGACATGCAGCATCCACATGCAGGAAGAGCTACACAGGCTGGGGCACAGCCAGAGATGGCCTaGACACGCAGCACTTCTGGT +
Preference number: 2 (lower is better)
Translates to: PRPDMQHPHAGRATQAGAQPEMA*TRSTSG
Trigger: ACCAGAAGTGCTGCGTGTTCAGGCCATCTCTGGCTG...TGCCCCAGCCTGTGTAGCTCTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR GCA 90 bp TGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCATGCAGCATCCACATaGAGGAAGAGCTACACAGGC +
Preference number: 2 (lower is better)
Translates to: WGAGTTGHSQHPCQDAWVHAAST*RKSYTG
Trigger: GCCTGTGTAGCTCTTCCTGCATGTGGATGCTGCATG...GACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR GCA 90 bp GGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAAGACTCAGCTTCCCGGATaGCTGCGTCCCGTTCAGCCT +
Preference number: 2 (lower is better)
Translates to: GSATSKPQTRHAASTCRKTQLPG*LRPVQP
Trigger: AGGCTGAACGGGACGCAGGCATCCGGGAAGCTGAGT...CTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580805.5
3UTR-3UTR GCA 90 bp TTTTGGCAGCAATCTGGGGCAGGGCCTCTAGCACCAAGGCCATCTTGGCTGCATACTCAGCTTCCCGGATaGCTGCGTCCCGTTCAGCCT +
Preference number: 2 (lower is better)
Translates to: FWQQSGAGPLAPRPSWLHTQLPG*LRPVQP
Trigger: AGGCTGAACGGGACGCAGGCATCCGGGAAGCTGAGT...ATGCAGCCAAGATGGCCTTGGTGCTAGAGGCCCTGCCCCAGATTGCTGCCAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR-3UTR GCA 90 bp CTAGACCCTCATCTCAGAAAACTTAGCAGAGTTGGGACCAAACCGCACCGCCCCGTAGACAGGAGGCCTTaGCTCTGTGCCCTTGGGGTC +
Preference number: 2 (lower is better)
Translates to: LDPHLRKLSRVGTKPHRPVDRRP*LCALGV
Trigger: GACCCCAAGGGCACAGAGGCAAGGCCTCCTGTCTAC...GGGGCGGTGCGGTTTGGTCCCAACTCTGCTAAGTTTTCTGAGATGAGGGTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR GCA 90 bp AGACAGAGGATTGGGTTGCTTCCCCATGGCTGGAACCCCATCACTCTGGCCAGGCAACACCCAGGACAGTaGAGCCCTAGCAGGAAGAAG +
Preference number: 2 (lower is better)
Translates to: RQRIGLLPHGWNPITLARQHPGQ*SPSRKK
Trigger: CTTCTTCCTGCTAGGGCTGCACTGTCCTGGGTGTTG...CCTGGCCAGAGTGATGGGGTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR GCA 90 bp CAGTGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCCAACACCCAGGACAGTaGAGCCCTAGCAGGAAGAAG +
Preference number: 2 (lower is better)
Translates to: QWGSATSKPQTRHAASTCQHPGQ*SPSRKK
Trigger: CTTCTTCCTGCTAGGGCTGCACTGTCCTGGGTGTTG...GCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR GCA 90 bp GCAGTGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGGACAGAGGATTGGGTTaGTTCCCCATGGCTGGAACC +
Preference number: 2 (lower is better)
Translates to: AVGQCNIQAPDQTCSIHMDRGLG*FPMAGT
Trigger: GGTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTC...CATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR GCA 90 bp CAGTGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCGACAGAGGATTGGGTTaGTTCCCCATGGCTGGAACC +
Preference number: 2 (lower is better)
Translates to: QWGSATSKPQTRHAASTCDRGLG*FPMAGT
Trigger: GGTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTC...GCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR GCA 90 bp CCACTGAGGACCACAATCTCATCGACCTTGGTAAGTGGGGCAGCGATTTTGGCATGCACCACGGCAGTCTaGGTCTTGCCCAGGGAGCTC +
Preference number: 2 (lower is better)
Translates to: PLRTTISSTLVSGAAILACTTAV*VLPREL
Trigger: GAGCTCCCTGGGCAAGACGCAGACTGCCGTGGTGCA...TGCCAAAATCGCTGCCCCACTTACCAAGGTCGATGAGATTGTGGTCCTCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR-3UTR GCA 90 bp TCTGGGGCAGGGCCTCTAGCACCAAGGCCATCTTGGCTGCATCCCCGTATTTCTATGTCAGCATCTCTCTaGACCACGGCAGTCTGCGTC +
Preference number: 2 (lower is better)
Translates to: SGAGPLAPRPSWLHPRISMSASL*TTAVCV
Trigger: GACGCAGACTGCCGTGGTGCAGAGAGATGCTGACAT...AGAAATACGGGGATGCAGCCAAGATGGCCTTGGTGCTAGAGGCCCTGCCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR-3UTR GCA 90 bp GGGTATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCTCTCTGAAGGCTGACTTTTaGAGCTCGAAGGCTCGCTTA +
Preference number: 2 (lower is better)
Translates to: GYERWLGPWVDEGKDSVSLKADF*SSKARL
Trigger: TAAGCGAGCCTTCGAGCTGCAAAAGTCAGCCTTCAG...AGAGACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580805.5
3UTR-3UTR GCA 90 bp TTTTGGCAGCAATCTGGGGCAGGGCCTCTAGCACCAAGGCCATCTTGGCTGCATCCGCCTCCCCGATTTTaGGGATCTTCTCAGCCTCTG +
Preference number: 2 (lower is better)
Translates to: FWQQSGAGPLAPRPSWLHPPPRF*GSSQPL
Trigger: CAGAGGCTGAGAAGATCCGCAAAATCGGGGAGGCGG...ATGCAGCCAAGATGGCCTTGGTGCTAGAGGCCCTGCCCCAGATTGCTGCCAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR-3UTR CCA 90 bp TGCACACCAGTGGCCTTCTTGATCAGGGGTATCTTAGACAGGTCCACGCCTGTGAAGGGCTCTGGGGTCTaGCCAGGCTACAGCACTCGA +
Preference number: 2 (lower is better)
Translates to: CTPVAFLIRGILDRSTPVKGSGV*PGYSTR
Trigger: TCGAGTGCTGTAGCCTGGCCAGACCCCAGAGCCCTT...CACAGGCGTGGACCTGTCTAAGATACCCCTGATCAAGAAGGCCACTGGTGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580805.5
3UTR-3UTR CCA 90 bp CTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTGGAACCCCATCACTCTaGCCAGGAAGAAAGATGGCA +
Preference number: 2 (lower is better)
Translates to: LDIHSTPAKTLGSWALLPGTPSL*PGRKMA
Trigger: TGCCATCTTTCTTCCTGGCCAGAGTGATGGGGTTCC...AGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR CCA 90 bp TGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGTGGGTTGCTTCCCCATaGCTGGAACCCCATCACTCT +
Preference number: 2 (lower is better)
Translates to: WGSATSKPQTRHAASTCRWVASP*LEPHHS
Trigger: AGAGTGATGGGGTTCCAGCCATGGGGAAGCAACCCA...CCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR CCA 90 bp CCCAGACCAGACATGCAGCATCCACATGCAGGAAGAGCTACACAGGCTGGGGCAAAGACGCTTGGGTCCTaGGCTCTTCTGCCTCCATTG +
Preference number: 2 (lower is better)
Translates to: PRPDMQHPHAGRATQAGAKTLGS*ALLPPL
Trigger: CAATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTT...TGCCCCAGCCTGTGTAGCTCTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR CCA 90 bp TGCACACCAGTGGCCTTCTTGATCAGGGGTATCTTAGACAGGTCCACGCCTGTGTCAGGGTCCCGAGGATaGAGCGCAGATGTCCCTCCA +
Preference number: 2 (lower is better)
Translates to: CTPVAFLIRGILDRSTPVSGSRG*SADVPP
Trigger: TGGAGGGACATCTGCGCTCCATCCTCGGGACCCTGA...CACAGGCGTGGACCTGTCTAAGATACCCCTGATCAAGAAGGCCACTGGTGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580805.5
3UTR CAA 90 bp TTCTGGTCCCTTCGAGATAAGGCACCAGAGTCAGTAACGTTCCCGTaGTTCTGTGGGATTAAAACGGGTGCTGGAGGGAGGGCCGGGTGG +
Preference number: 2 (lower is better)
Translates to: FWSLRDKAPESVTFP*FCGIKTGAGGRAGW
Trigger: CCACCCGGCCCTCCCTCCAGCACCCGTTTTAATCCCACAGAACAACGGGAACGTTACTGACTCTGGTGCCTTATCTCGAAGGGACCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR CAA 90 bp CTGGGCTCTTCTGCCTCCATTGGAGCAAGGAGACAGAGGATTGGGTaGCTTCCCCATGGCTGGAACCCCATCACTCTGGCCAGGAAGAAA +
Preference number: 2 (lower is better)
Translates to: LGSSASIGARRQRIG*LPHGWNPITLARKK
Trigger: TTTCTTCCTGGCCAGAGTGATGGGGTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCTCCTTGCTCCAATGGAGGCAGAAGAGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR GCA 90 bp TGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAAGAGCTAGAGGCCTTGCCTCTGTaGCCTTGGGGTCAGGGAGAA +
Preference number: 2 (lower is better)
Translates to: CNIQAPDQTCSIHMQEELEALPL*PWGQGE
Trigger: TTCTCCCTGACCCCAAGGGCACAGAGGCAAGGCCTC...TAGCTCTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR GCA 90 bp ACGCAGCACTTCTGGTCCCTTCGAGATAAGGCACCAGAGTCAGTAACGTTCCCGGGTCCTGGGCTCTTCTaGCTCCATTGGAGCAAGGAG +
Preference number: 2 (lower is better)
Translates to: TQHFWSLRDKAPESVTFPGPGLF*LHWSKE
Trigger: CTCCTTGCTCCAATGGAGGCAGAAGAGCCCAGGACC...CGGGAACGTTACTGACTCTGGTGCCTTATCTCGAAGGGACCAGAAGTGCTGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR CCA 90 bp ACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAAGAGCTACACAACAGGGTATGAGCGCTaGCTGGGGCCTTGGGTGGAT +
Preference number: 2 (lower is better)
Translates to: TSKPQTRHAASTCRKSYTTGYER*LGPWVD
Trigger: ATCCACCCAAGGCCCCAGCCAGCGCTCATACCCTGT...TGTGTAGCTCTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR CCA 90 bp ACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAAGAGCTACACAATGGCACAAGGGCTCTaGGGTCTGGCCAGGCTACAG +
Preference number: 2 (lower is better)
Translates to: TSKPQTRHAASTCRKSYTMAQGL*GLARLQ
Trigger: CTGTAGCCTGGCCAGACCCCAGAGCCCTTGTGCCAT...TGTGTAGCTCTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR CCA 90 bp GGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAAGTGGGTTGCTTCCCCATaGCTGGAACCCCATCACTCT +
Preference number: 2 (lower is better)
Translates to: GSATSKPQTRHAASTCRKWVASP*LEPHHS
Trigger: AGAGTGATGGGGTTCCAGCCATGGGGAAGCAACCCA...CTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR GCA 90 bp TTTTGGCAGCAATCTGGGGCAGGGCCTCTAGCACCAAGGCCATCTTGGCTGCATTGTGCCAAGAGGACCTaGTTCACCTTTTCACCCTCG +
Preference number: 2 (lower is better)
Translates to: FWQQSGAGPLAPRPSWLHCAKRT*FTFSPS
Trigger: CGAGGGTGAAAAGGTGAAGCAGGTCCTCTTGGCACA...ATGCAGCCAAGATGGCCTTGGTGCTAGAGGCCCTGCCCCAGATTGCTGCCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR CAA 90 bp GGCAGCTCGGCCAGCAGTCGGTTCACTTCTGATGTGACCTTACTGTaGTCTCCACTGAGGACCACAATCTCATCGACCTTGGTAAGTGGG +
Preference number: 2 (lower is better)
Translates to: GSSASSRFTSDVTLL*SPLRTTISSTLVSG
Trigger: CCCACTTACCAAGGTCGATGAGATTGTGGTCCTCAGTGGAGACAACAGTAAGGTCACATCAGAAGTGAACCGACTGCTGGCCGAGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR-3UTR TCA 90 bp GATGGCACAAGGGCTCTGGGGTCTGGCCAGGCTACAGCACTCGATTCTGTACAGAGACACGCAGGGAGATaGGACACAAACCTGATGAAA +
Preference number: 2 (lower is better)
Translates to: DGTRALGSGQATALDSVQRHAGR*DTNLMK
Trigger: TTTCATCAGGTTTGTGTCTCATCTCCCTGCGTGTCT...CTGTACAGAATCGAGTGCTGTAGCCTGGCCAGACCCCAGAGCCCTTGTGCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR TCA 90 bp ACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTCCATAGACACGCAGGGAGATaGGACACAAACCTGATGAAA +
Preference number: 2 (lower is better)
Translates to: TFTAPLPRRLGPGLFCLHRHAGR*DTNLMK
Trigger: TTTCATCAGGTTTGTGTCTCATCTCCCTGCGTGTCT...ATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR TCA 90 bp ACACGCAGGGAGATGAGACACAAACCTGATGAAAGTGGCAGTGAAAGTGGGGTAAGAAAGGACAGGGTATaGGCGCTGGCTGGGGCCTTG +
Preference number: 2 (lower is better)
Translates to: TRREMRHKPDESGSESGVRKDRV*ALAGAL
Trigger: CAAGGCCCCAGCCAGCGCTCATACCCTGTCCTTTCT...TACCCCACTTTCACTGCCACTTTCATCAGGTTTGTGTCTCATCTCCCTGCGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR TCA 90 bp AGACAGAGGATTGGGTTGCTTCCCCATGGCTGGAACCCCATCACTCTGGCCAGGGGTTCACTTCTGATGTaGCCTTACTGTTGTCTCCAC +
Preference number: 2 (lower is better)
Translates to: RQRIGLLPHGWNPITLARGSLLM*PYCCLH
Trigger: GTGGAGACAACAGTAAGGTCACATCAGAAGTGAACC...CCTGGCCAGAGTGATGGGGTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580805.5
3UTR-3UTR GCA 90 bp ATGAGCTCCTTGTCCGTACGCAGGATCTCCTGTGCCTCCACGGCAATCTGTTTCTGTCCCTCCAGGGTCTaGAGGACGACGTTTTTGATG +
Preference number: 2 (lower is better)
Translates to: MSSLSVRRISCASTAICFCPSRV*RTTFLM
Trigger: CATCAAAAACGTCGTCCTGCAGACCCTGGAGGGACA...GAAACAGATTGCCGTGGAGGCACAGGAGATCCTGCGTACGGACAAGGAGCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580805.5
3UTR-3UTR GCA 90 bp TGTGACCTTACTGTTGTCTCCACTGAGGACCACAATCTCATCGACCTTGGTAAGTGCACCACGGCAGTCTaGGTCTTGCCCAGGGAGCTC +
Preference number: 2 (lower is better)
Translates to: CDLTVVSTEDHNLIDLGKCTTAV*VLPREL
Trigger: GAGCTCCCTGGGCAAGACGCAGACTGCCGTGGTGCA...CTTACCAAGGTCGATGAGATTGTGGTCCTCAGTGGAGACAACAGTAAGGTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR-3UTR CCA 90 bp GCCTCCATTGGAGCAAGGAGACAGAGGATTGGGTTGCTTCCCCATGGCTGGAACAACACGCAGCACTTCTaGTCCCTTCGAGATAAGGCA +
Preference number: 2 (lower is better)
Translates to: ASIGARRQRIGLLPHGWNNTQHF*SLRDKA
Trigger: TGCCTTATCTCGAAGGGACCAGAAGTGCTGCGTGTT...GTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCTCCTTGCTCCAATGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR CCA 90 bp ACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAAGAGCTACACAAAGACGCTTGGGTCCTaGGCTCTTCTGCCTCCATTG +
Preference number: 2 (lower is better)
Translates to: TSKPQTRHAASTCRKSYTKTLGS*ALLPPL
Trigger: CAATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTT...TGTGTAGCTCTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR CAA 90 bp TTGTCCGTACGCAGGATCTCCTGTGCCTCCACGGCAATCTGTTTCTaGCGCTGCACAACCTCAATCTCAATCTCTTCCTGCCGGATCTTC +
Preference number: 2 (lower is better)
Translates to: LSVRRISCASTAICF*RCTTSISISSCRIF
Trigger: GAAGATCCGGCAGGAAGAGATTGAGATTGAGGTTGTGCAGCGCAAGAAACAGATTGCCGTGGAGGCACAGGAGATCCTGCGTACGGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR-3UTR GCA 90 bp TCTGGGGCAGGGCCTCTAGCACCAAGGCCATCTTGGCTGCATCCCCGTATTTCTATCTCAATCTCTTCCTaGCGGATCTTCTGCTGTTCA +
Preference number: 2 (lower is better)
Translates to: SGAGPLAPRPSWLHPRISISISS*RIFCCS
Trigger: TGAACAGCAGAAGATCCGGCAGGAAGAGATTGAGAT...AGAAATACGGGGATGCAGCCAAGATGGCCTTGGTGCTAGAGGCCCTGCCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR-3UTR TCA 90 bp GAGAGTGATTGTAATAAACATCTTCAGCTTAATCTACATGATGTGCATGGGGGAGGGCCGGGTGGCTGCTaGAGAGAGTGGGCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: ESDCNKHLQLNLHDVHGGGPGGC*REWACR
Trigger: CCTGCAGGCCCACTCTCTTCAGCAGCCACCCGGCCC...TCCCCCATGCACATCATGTAGATTAAGCTGAAGATGTTTATTACAATCACTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR TCA 90 bp ACGCAGCACTTCTGGTCCCTTCGAGATAAGGCACCAGAGTCAGTAACGTTCCCGTCTTGGTGTCTGCCATaGACTTCACATCCAGCATCT +
Preference number: 2 (lower is better)
Translates to: TQHFWSLRDKAPESVTFPSWCLP*TSHPAS
Trigger: AGATGCTGGATGTGAAGTTCATGGCAGACACCAAGA...CGGGAACGTTACTGACTCTGGTGCCTTATCTCGAAGGGACCAGAAGTGCTGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580805.5
3UTR-3UTR CCA 90 bp GAGAGTGATTGTAATAAACATCTTCAGCTTAATCTACATGATGTGCATGGGGGAGGAGGGAGGGCCGGGTaGCTGCTGAAGAGAGTGGGC +
Preference number: 2 (lower is better)
Translates to: ESDCNKHLQLNLHDVHGGGGRAG*LLKRVG
Trigger: GCCCACTCTCTTCAGCAGCCACCCGGCCCTCCCTCC...TCCCCCATGCACATCATGTAGATTAAGCTGAAGATGTTTATTACAATCACTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR CAA 90 bp AAGGCTGACTTTTGCAGCTCGAAGGCTCGCTTAGAGTCAGCAATCTaGGTGTCTGCCATGAACTTCACATCCAGCATCTCCTTCTTGCAC +
Preference number: 2 (lower is better)
Translates to: KADFCSSKARLESAI*VSAMNFTSSISFLH
Trigger: GTGCAAGAAGGAGATGCTGGATGTGAAGTTCATGGCAGACACCAAGATTGCTGACTCTAAGCGAGCCTTCGAGCTGCAAAAGTCAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR-3UTR TCA 90 bp ACACGCAGGGAGATGAGACACAAACCTGATGAAAGTGGCAGTGAAAGTGGGGTAAGACACGCAGGGAGATaGGACACAAACCTGATGAAA +
Preference number: 2 (lower is better)
Translates to: TRREMRHKPDESGSESGVRHAGR*DTNLMK
Trigger: TTTCATCAGGTTTGTGTCTCATCTCCCTGCGTGTCT...TACCCCACTTTCACTGCCACTTTCATCAGGTTTGTGTCTCATCTCCCTGCGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR TCA 90 bp GAGAGTGATTGTAATAAACATCTTCAGCTTAATCTACATGATGTGCATGGGGGAAGAAAGGACAGGGTATaGGCGCTGGCTGGGGCCTTG +
Preference number: 2 (lower is better)
Translates to: ESDCNKHLQLNLHDVHGGRKDRV*ALAGAL
Trigger: CAAGGCCCCAGCCAGCGCTCATACCCTGTCCTTTCT...TCCCCCATGCACATCATGTAGATTAAGCTGAAGATGTTTATTACAATCACTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR CCA 90 bp GAGAGTGATTGTAATAAACATCTTCAGCTTAATCTACATGATGTGCATGGGGGAATGGCACAAGGGCTCTaGGGTCTGGCCAGGCTACAG +
Preference number: 2 (lower is better)
Translates to: ESDCNKHLQLNLHDVHGGMAQGL*GLARLQ
Trigger: CTGTAGCCTGGCCAGACCCCAGAGCCCTTGTGCCAT...TCCCCCATGCACATCATGTAGATTAAGCTGAAGATGTTTATTACAATCACTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR GCA 90 bp TGCAGCTCGAAGGCTCGCTTAGAGTCAGCAATCTTGGTGTCTGCCATGAACTTCACGTTTTTGATGTCCTaGACATTCTTACCCAGAAAC +
Preference number: 2 (lower is better)
Translates to: CSSKARLESAILVSAMNFTFLMS*TFLPRN
Trigger: GTTTCTGGGTAAGAATGTGCAGGACATCAAAAACGT...GAAGTTCATGGCAGACACCAAGATTGCTGACTCTAAGCGAGCCTTCGAGCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580805.5
3UTR-3UTR CCA 90 bp GAGAGTGATTGTAATAAACATCTTCAGCTTAATCTACATGATGTGCATGGGGGAGGCCAGGAAGAAAGATaGCACAAGGGCTCTGGGGTC +
Preference number: 2 (lower is better)
Translates to: ESDCNKHLQLNLHDVHGGGQEER*HKGSGV
Trigger: GACCCCAGAGCCCTTGTGCCATCTTTCTTCCTGGCC...TCCCCCATGCACATCATGTAGATTAAGCTGAAGATGTTTATTACAATCACTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR TCA 90 bp GTGATTGTAATAAACATCTTCAGCTTAATCTACATGATGTGCATGGGGGAAAGACAGCCAGAGATGGCCTaGACACGCAGCACTTCTGGT +
Preference number: 2 (lower is better)
Translates to: VIVINIFSLIYMMCMGERQPEMA*TRSTSG
Trigger: ACCAGAAGTGCTGCGTGTTCAGGCCATCTCTGGCTG...TCTTTCCCCCATGCACATCATGTAGATTAAGCTGAAGATGTTTATTACAATCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR GCA 72 bp CCTGCTTCACCTTTTCACCCTCGGCAATCTGCTGGATaGGGTGGGCCTCGGCCTCGGCAGGCCGGCGCACTG +
Preference number: 3 (lower is better)
Translates to: PASPFHPRQSAG*GGPRPRQAGAL
Trigger: CAGTGCGCCGGCCTGCCGAGGCCGAGGCCCACCGCATCCAGCAGATTGCCGAGGGTGAAAAGGTGAAGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR CCA 72 bp AGGACCTGCTTCACCTTTTCACCCTCGGCAATCTGCTaGATGCGGTGGGCCTCGGCCTCGGCAGGCCGGCGC +
Preference number: 3 (lower is better)
Translates to: RTCFTFSPSAIC*MRWASASAGRR
Trigger: GCGCCGGCCTGCCGAGGCCGAGGCCCACCGCATCCAGCAGATTGCCGAGGGTGAAAAGGTGAAGCAGGTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR CCA 72 bp TTCACCTTTTCACCCTCGGCAATCTGCTGGATGCGGTaGGCCTCGGCCTCGGCAGGCCGGCGCACTGTAGCG +
Preference number: 3 (lower is better)
Translates to: FTFSPSAICWMR*ASASAGRRTVA
Trigger: CGCTACAGTGCGCCGGCCTGCCGAGGCCGAGGCCCACCGCATCCAGCAGATTGCCGAGGGTGAAAAGGTGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR-3UTR CAA 90 bp GGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCCGCTCAGCCTCTGCCTaGCCCATCGCCTCGATGACT +
Preference number: 3 (lower is better)
Translates to: GELGPLDIHSTPAKTLGSRSASA*PIASMT
Trigger: AGTCATCGAGGCGATGGGCAAGGCAGAGGCTGAGCG...GGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580805.5
3UTR GCA 72 bp TGGGTGGATGAGGGGAAGGACAGTGTCTCTGGGCCCTaGAGGTCATGGCTGCCCAGACCTAGAGGGGCAGCA +
Preference number: 3 (lower is better)
Translates to: WVDEGKDSVSGP*RSWLPRPRGAA
Trigger: TGCTGCCCCTCTAGGTCTGGGCAGCCATGACCTGCAGGGCCCAGAGACACTGTCCTTCCCCTCATCCACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR GCA 72 bp TGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTaGCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTCC +
Preference number: 3 (lower is better)
Translates to: WGAGTTGHSQHP*QDAWVLGSSAS
Trigger: GGAGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR GCA 72 bp GAGGATCTCAATGCCCATGCGGCCAACATCAGGGGCTaGCACCTCCCGCACCAGCTTGGCAAACTGGTCCCG +
Preference number: 3 (lower is better)
Translates to: EDLNAHAANIRG*HLPHQLGKLVP
Trigger: CGGGACCAGTTTGCCAAGCTGGTGCGGGAGGTGGCAGCCCCTGATGTTGGCCGCATGGGCATTGAGATCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580805.5
3UTR-3UTR CAA 90 bp TGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGCCCCTGCCAAGACGCTaGGGTCCTGGGCTCTTCTGC +
Preference number: 3 (lower is better)
Translates to: WGSATSKPQTRHAASTCRPLPRR*GPGLFC
Trigger: GCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGG...CCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR GCA 72 bp GTAGGCTTCTGCCTTGAGCTTCATCCGCTCAGCCTCTaGCTTGCCCATCGCCTCGATGACTGCCGCTTCCGC +
Preference number: 3 (lower is better)
Translates to: VGFCLELHPLSL*LAHRLDDCRFR
Trigger: GCGGAAGCGGCAGTCATCGAGGCGATGGGCAAGGCAGAGGCTGAGCGGATGAAGCTCAAGGCAGAAGCCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR-3UTR CAA 90 bp ACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCAGGGTTGGCACAGCCTaGTCCACCAGAAGGGCCCAA +
Preference number: 3 (lower is better)
Translates to: TGHSQHPCQDAWVLGSSARVGTA*STRRAQ
Trigger: TTGGGCCCTTCTGGTGGACAAGGCTGTGCCAACCCT...GGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR CAA 90 bp CCAGGGTGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTAGACAGAGGATTGGGTaGCTTCCCCATGGCTGGAAC +
Preference number: 3 (lower is better)
Translates to: PGWGAGTTGHSQHPCQDARQRIG*LPHGWN
Trigger: GTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCT...AGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCACCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR CAA 90 bp ATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCTCTGGGCGCTCTTCTGCCTCCATaGGAGCAAGGAGACAGAGGA +
Preference number: 3 (lower is better)
Translates to: MSAGWGLGWMRGRTVSLGALLPP*EQGDRG
Trigger: TCCTCTGTCTCCTTGCTCCAATGGAGGCAGAAGAGC...GCCCAGAGACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR GCA 72 bp GCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTaGCTCCATTGGAGCAAGGAGACAGAGGATTGGGTT +
Preference number: 3 (lower is better)
Translates to: APLPRRLGPGLF*LHWSKETEDWV
Trigger: AACCCAATCCTCTGTCTCCTTGCTCCAATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR CCA 72 bp ACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTaGGTCCTGGGCTCTTCTGCCTCCATTGGAGCAAGG +
Preference number: 3 (lower is better)
Translates to: TTGHSQHPCQDA*VLGSSASIGAR
Trigger: CCTTGCTCCAATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR CAA 90 bp CTAGACCCTCATCTCAGAAAACTTAGCAGAGTTGGGACCAAACCGCACCGCCCCTGTAGACAGGAGGCCTaGCCTCTGTGCCCTTGGGGT +
Preference number: 3 (lower is better)
Translates to: LDPHLRKLSRVGTKPHRPCRQEA*PLCPWG
Trigger: ACCCCAAGGGCACAGAGGCAAGGCCTCCTGTCTACA...GGGGCGGTGCGGTTTGGTCCCAACTCTGCTAAGTTTTCTGAGATGAGGGTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR CAA 90 bp CAGTGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCGAAAACTTAGCAGAGTaGGGACCAAACCGCACCGCC +
Preference number: 3 (lower is better)
Translates to: QWGSATSKPQTRHAASTCENLAE*GPNRTA
Trigger: GGCGGTGCGGTTTGGTCCCAACTCTGCTAAGTTTTC...GCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR GCA 72 bp GTGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATaGAGCATCCACATGCAGGAAGAGCTACACAGGCTG +
Preference number: 3 (lower is better)
Translates to: VGQCNIQAPDQT*SIHMQEELHRL
Trigger: CAGCCTGTGTAGCTCTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR CCA 72 bp CCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTCCATTaGAGCAAGGAGACAGAGGATTGGGTTGCTTCCCCA +
Preference number: 3 (lower is better)
Translates to: PRRLGPGLFCLH*SKETEDWVASP
Trigger: TGGGGAAGCAACCCAATCCTCTGTCTCCTTGCTCCAATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR CCA 72 bp GACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTaGGCTCTTCTGCCTCCATTGGAGCAAGGAGACAGA +
Preference number: 3 (lower is better)
Translates to: DIHSTPAKTLGS*ALLPPLEQGDR
Trigger: TCTGTCTCCTTGCTCCAATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR CAA 90 bp TGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAAGAGCTAAGGGTTGGCACAGCCTaGTCCACCAGAAGGGCCCAA +
Preference number: 3 (lower is better)
Translates to: CNIQAPDQTCSIHMQEELRVGTA*STRRAQ
Trigger: TTGGGCCCTTCTGGTGGACAAGGCTGTGCCAACCCT...TAGCTCTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR GCA 72 bp TTCTTGCGCTGCACAACCTCAATCTCAATCTCTTCCTaGCGGATCTTCTGCTGTTCACGGGCCCCCTGCAGC +
Preference number: 3 (lower is better)
Translates to: FLRCTTSISISS*RIFCCSRAPCS
Trigger: GCTGCAGGGGGCCCGTGAACAGCAGAAGATCCGGCAGGAAGAGATTGAGATTGAGGTTGTGCAGCGCAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR GCA 72 bp AGCGATGAGCTCCTTGTCCGTACGCAGGATCTCCTGTaGCTCCACGGCAATCTGTTTCTTGCGCTGCACAAC +
Preference number: 3 (lower is better)
Translates to: SDELLVRTQDLL*LHGNLFLALHN
Trigger: GTTGTGCAGCGCAAGAAACAGATTGCCGTGGAGGCACAGGAGATCCTGCGTACGGACAAGGAGCTCATCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR GCA 72 bp CATCTTGGCTGCATCCCCGTATTTCTGGTAGGCTTCTaGCTTGAGCTTCATCCGCTCAGCCTCTGCCTTGCC +
Preference number: 3 (lower is better)
Translates to: HLGCIPVFLVGF*LELHPLSLCLA
Trigger: GGCAAGGCAGAGGCTGAGCGGATGAAGCTCAAGGCAGAAGCCTACCAGAAATACGGGGATGCAGCCAAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR GCA 72 bp CTGCTGAAGAGAGTGGGCCTGCAGGAGCCTCACACCTaGACACCAGTGGCCTTCTTGATCAGGGGTATCTTA +
Preference number: 3 (lower is better)
Translates to: LLKRVGLQEPHT*TPVAFLIRGIL
Trigger: TAAGATACCCCTGATCAAGAAGGCCACTGGTGTGCAGGTGTGAGGCTCCTGCAGGCCCACTCTCTTCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580805.5
3UTR CCA 72 bp TCACTCTGGCCAGGAAGAAAGATGGCACAAGGGCTCTaGGGTCTGGCCAGGCTACAGCACTCGATTCTGTAC +
Preference number: 3 (lower is better)
Translates to: SLWPGRKMAQGL*GLARLQHSILY
Trigger: GTACAGAATCGAGTGCTGTAGCCTGGCCAGACCCCAGAGCCCTTGTGCCATCTTTCTTCCTGGCCAGAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR CCA 72 bp GCAAGGAGACAGAGGATTGGGTTGCTTCCCCATGGCTaGAACCCCATCACTCTGGCCAGGAAGAAAGATGGC +
Preference number: 3 (lower is better)
Translates to: ARRQRIGLLPHG*NPITLARKKDG
Trigger: GCCATCTTTCTTCCTGGCCAGAGTGATGGGGTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCTCCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR CCA 72 bp TCCACTGAGGACCACAATCTCATCGACCTTGGTAAGTaGGGCAGCGATTTTGGCAGCAATCTGGGGCAGGGC +
Preference number: 3 (lower is better)
Translates to: STEDHNLIDLGK*GSDFGSNLGQG
Trigger: GCCCTGCCCCAGATTGCTGCCAAAATCGCTGCCCCACTTACCAAGGTCGATGAGATTGTGGTCCTCAGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR-3UTR CAA 90 bp TCAATCTCAATCTCTTCCTGCCGGATCTTCTGCTGTTCACGGGCCCCCTGCAGCTGGGCCTCAGCTGTCTaGATGTTAACCTCCTCACTG +
Preference number: 3 (lower is better)
Translates to: SISISSCRIFCCSRAPCSWASAV*MLTSSL
Trigger: CAGTGAGGAGGTTAACATCAAGACAGCTGAGGCCCA...GCTGCAGGGGGCCCGTGAACAGCAGAAGATCCGGCAGGAAGAGATTGAGATTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR TCA 72 bp CAGACAGGAGAGACAGGAAGACAGCCAGAGATGGCCTaGACACGCAGCACTTCTGGTCCCTTCGAGATAAGG +
Preference number: 3 (lower is better)
Translates to: QTGETGRQPEMA*TRSTSGPFEIR
Trigger: CCTTATCTCGAAGGGACCAGAAGTGCTGCGTGTTCAGGCCATCTCTGGCTGTCTTCCTGTCTCTCCTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR GCA 72 bp GTCCCGAGGATGGAGCGCAGATGTCCCTCCAGGGTCTaGAGGACGACGTTTTTGATGTCCTGCACATTCTTA +
Preference number: 3 (lower is better)
Translates to: VPRMERRCPSRV*RTTFLMSCTFL
Trigger: TAAGAATGTGCAGGACATCAAAAACGTCGTCCTGCAGACCCTGGAGGGACATCTGCGCTCCATCCTCGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580805.5
3UTR CCA 72 bp CTCTTCTGCCTCCATTGGAGCAAGGAGACAGAGGATTaGGTTGCTTCCCCATGGCTGGAACCCCATCACTCT +
Preference number: 3 (lower is better)
Translates to: LFCLHWSKETED*VASPWLEPHHS
Trigger: AGAGTGATGGGGTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCTCCTTGCTCCAATGGAGGCAGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR CAA 90 bp ACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTCAGTAACGTTCCCGTaGTTCTGTGGGATTAAAACG +
Preference number: 3 (lower is better)
Translates to: TGHSQHPCQDAWVLGSSASVTFP*FCGIKT
Trigger: CGTTTTAATCCCACAGAACAACGGGAACGTTACTGA...GGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR CAA 90 bp AGGGAGGATGGACAGATGCACAGAGAACTTCAAGGCACCAGGATTCTGAGGAGCGAAAACTTAGCAGAGTaGGGACCAAACCGCACCGCC +
Preference number: 3 (lower is better)
Translates to: REDGQMHRELQGTRILRSENLAE*GPNRTA
Trigger: GGCGGTGCGGTTTGGTCCCAACTCTGCTAAGTTTTC...GCTCCTCAGAATCCTGGTGCCTTGAAGTTCTCTGTGCATCTGTCCATCCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR CCA 72 bp AAGACAGCCAGAGATGGCCTGAACACGCAGCACTTCTaGTCCCTTCGAGATAAGGCACCAGAGTCAGTAACG +
Preference number: 3 (lower is better)
Translates to: KTARDGLNTQHF*SLRDKAPESVT
Trigger: CGTTACTGACTCTGGTGCCTTATCTCGAAGGGACCAGAAGTGCTGCGTGTTCAGGCCATCTCTGGCTGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR CAA 90 bp GGTCTGGCCAGGCTACAGCACTCGATTCTGTACAGGGTTGGCACAGCCTTGTCCTCAGTAACGTTCCCGTaGTTCTGTGGGATTAAAACG +
Preference number: 3 (lower is better)
Translates to: GLARLQHSILYRVGTALSSVTFP*FCGIKT
Trigger: CGTTTTAATCCCACAGAACAACGGGAACGTTACTGA...GGACAAGGCTGTGCCAACCCTGTACAGAATCGAGTGCTGTAGCCTGGCCAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR GCA 72 bp ATCTCCTGTGCCTCCACGGCAATCTGTTTCTTGCGCTaGACAACCTCAATCTCAATCTCTTCCTGCCGGATC +
Preference number: 3 (lower is better)
Translates to: ISCASTAICFLR*TTSISISSCRI
Trigger: GATCCGGCAGGAAGAGATTGAGATTGAGGTTGTGCAGCGCAAGAAACAGATTGCCGTGGAGGCACAGGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR-3UTR CAA 90 bp TCAATCTCAATCTCTTCCTGCCGGATCTTCTGCTGTTCACGGGCCCCCTGCAGCTCAGTAACGTTCCCGTaGTTCTGTGGGATTAAAACG +
Preference number: 3 (lower is better)
Translates to: SISISSCRIFCCSRAPCSSVTFP*FCGIKT
Trigger: CGTTTTAATCCCACAGAACAACGGGAACGTTACTGA...GCTGCAGGGGGCCCGTGAACAGCAGAAGATCCGGCAGGAAGAGATTGAGATTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580805.5
3UTR-3UTR CAA 90 bp ACACGCAGGGAGATGAGACACAAACCTGATGAAAGTGGCAGTGAAAGTGGGGTAGAAAACTTAGCAGAGTaGGGACCAAACCGCACCGCC +
Preference number: 3 (lower is better)
Translates to: TRREMRHKPDESGSESGVENLAE*GPNRTA
Trigger: GGCGGTGCGGTTTGGTCCCAACTCTGCTAAGTTTTC...TACCCCACTTTCACTGCCACTTTCATCAGGTTTGTGTCTCATCTCCCTGCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR CAA 90 bp TTTTGGCAGCAATCTGGGGCAGGGCCTCTAGCACCAAGGCCATCTTGGCTGCATTTAGAGTCAGCAATCTaGGTGTCTGCCATGAACTTC +
Preference number: 3 (lower is better)
Translates to: FWQQSGAGPLAPRPSWLHLESAI*VSAMNF
Trigger: GAAGTTCATGGCAGACACCAAGATTGCTGACTCTAA...ATGCAGCCAAGATGGCCTTGGTGCTAGAGGCCCTGCCCCAGATTGCTGCCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR-3UTR CAA 90 bp ATGAGCTCCTTGTCCGTACGCAGGATCTCCTGTGCCTCCACGGCAATCTGTTTCTGCAGGACGACGTTTTaGATGTCCTGCACATTCTTA +
Preference number: 3 (lower is better)
Translates to: MSSLSVRRISCASTAICFCRTTF*MSCTFL
Trigger: TAAGAATGTGCAGGACATCAAAAACGTCGTCCTGCA...GAAACAGATTGCCGTGGAGGCACAGGAGATCCTGCGTACGGACAAGGAGCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580805.5
3UTR-3UTR CAA 90 bp CCACTGAGGACCACAATCTCATCGACCTTGGTAAGTGGGGCAGCGATTTTGGCATTGTCATACACGTCCTaGATGGTGAAGCTGAGGATC +
Preference number: 3 (lower is better)
Translates to: PLRTTISSTLVSGAAILALSYTS*MVKLRI
Trigger: GATCCTCAGCTTCACCATCAAGGACGTGTATGACAA...TGCCAAAATCGCTGCCCCACTTACCAAGGTCGATGAGATTGTGGTCCTCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR-3UTR CAA 90 bp TTGATGTTAACCTCCTCACTGAAGGCTGACTTTTGCAGCTCGAAGGCTCGCTTATCCAGCATCTCCTTCTaGCACTCAGCTTCCCGGATG +
Preference number: 3 (lower is better)
Translates to: LMLTSSLKADFCSSKARLSSISF*HSASRM
Trigger: CATCCGGGAAGCTGAGTGCAAGAAGGAGATGCTGGA...TAAGCGAGCCTTCGAGCTGCAAAAGTCAGCCTTCAGTGAGGAGGTTAACATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR TCA 72 bp CTCAGCTGTCTTGATGTTAACCTCCTCACTGAAGGCTaGCTTTTGCAGCTCGAAGGCTCGCTTAGAGTCAGC +
Preference number: 3 (lower is better)
Translates to: LSCLDVNLLTEG*LLQLEGSLRVS
Trigger: GCTGACTCTAAGCGAGCCTTCGAGCTGCAAAAGTCAGCCTTCAGTGAGGAGGTTAACATCAAGACAGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR-3UTR CAA 90 bp ACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAAGAGCTACACATTAGAGTCAGCAATCTaGGTGTCTGCCATGAACTTC +
Preference number: 3 (lower is better)
Translates to: TSKPQTRHAASTCRKSYTLESAI*VSAMNF
Trigger: GAAGTTCATGGCAGACACCAAGATTGCTGACTCTAA...TGTGTAGCTCTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580805.5
3UTR GCA 72 bp CTCGAAGGCTCGCTTAGAGTCAGCAATCTTGGTGTCTaGCATGAACTTCACATCCAGCATCTCCTTCTTGCA +
Preference number: 3 (lower is better)
Translates to: LEGSLRVSNLGV*HELHIQHLLLA
Trigger: TGCAAGAAGGAGATGCTGGATGTGAAGTTCATGGCAGACACCAAGATTGCTGACTCTAAGCGAGCCTTCGAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR-3UTR CAA 90 bp GTGATTGTAATAAACATCTTCAGCTTAATCTACATGATGTGCATGGGGGAAAGAACCTCCCGCACCAGCTaGGCAAACTGGTCCCGGTCC +
Preference number: 3 (lower is better)
Translates to: VIVINIFSLIYMMCMGERTSRTS*ANWSRS
Trigger: GGACCGGGACCAGTTTGCCAAGCTGGTGCGGGAGGT...TCTTTCCCCCATGCACATCATGTAGATTAAGCTGAAGATGTTTATTACAATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580805.5
3UTR-3UTR CAA 90 bp GTGACCTTACTGTTGTCTCCACTGAGGACCACAATCTCATCGACCTTGGTAAGTACGGCAATCTGTTTCTaGCGCTGCACAACCTCAATC +
Preference number: 3 (lower is better)
Translates to: VTLLLSPLRTTISSTLVSTAICF*RCTTSI
Trigger: GATTGAGGTTGTGCAGCGCAAGAAACAGATTGCCGT...ACTTACCAAGGTCGATGAGATTGTGGTCCTCAGTGGAGACAACAGTAAGGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR TCA 72 bp GAAAAAGACAGACAAAGGAAAAGACACGCAGGGAGATaGGACACAAACCTGATGAAAGTGGCAGTGAAAGTG +
Preference number: 3 (lower is better)
Translates to: EKDRQRKRHAGR*DTNLMKVAVKV
Trigger: CACTTTCACTGCCACTTTCATCAGGTTTGTGTCTCATCTCCCTGCGTGTCTTTTCCTTTGTCTGTCTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR-3UTR CAA 90 bp ACAGAGAGTGATTGTAATAAACATCTTCAGCTTAATCTACATGATGTGCATGGGTCAGTAACGTTCCCGTaGTTCTGTGGGATTAAAACG +
Preference number: 3 (lower is better)
Translates to: TESDCNKHLQLNLHDVHGSVTFP*FCGIKT
Trigger: CGTTTTAATCCCACAGAACAACGGGAACGTTACTGA...CCCATGCACATCATGTAGATTAAGCTGAAGATGTTTATTACAATCACTCTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp CCAGGGTGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTGGGCCGGGTGGCTGCTaGAGAGAGTGGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PGWGAGTTGHSQHPCQDAGPGGC*REWACR
Trigger: CCTGCAGGCCCACTCTCTTCAGCAGCCACCCGGCCC...AGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCACCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp GGCAATCTGCTGGATGCGGTGGGCCTCGGCCTCGGCAGGCCGGCGCACTGTAGCTCAGGGTCCCGAGGATaGAGCGCAGATGTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: GNLLDAVGLGLGRPAHCSSGSRG*SADVPP
Trigger: TGGAGGGACATCTGCGCTCCATCCTCGGGACCCTGA...GCTACAGTGCGCCGGCCTGCCGAGGCCGAGGCCCACCGCATCCAGCAGATTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580805.5
CDS-3UTR TCA 90 bp CCAGGGTGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGCCCATCGCCTCGATaGCTGCCGCTTCCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: PGWGAGTTGHSQHPCQDACPSPR*LPLPPP
Trigger: GGGAGGCGGAAGCGGCAGTCATCGAGGCGATGGGCA...AGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCACCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp CTGGGCCCTGCAGGTCATGGCTGCCCAGACCTAGAGGGGCAGCAGCAGGTGAGGTGCACCACGGCAGTCTaGGTCTTGCCCAGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: LGPAGHGCPDLEGQQQVRCTTAV*VLPREL
Trigger: GAGCTCCCTGGGCAAGACGCAGACTGCCGTGGTGCA...CCTCACCTGCTGCTGCCCCTCTAGGTCTGGGCAGCCATGACCTGCAGGGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR CAA 72 bp GCCTCGGCAGGCCGGCGCACTGTAGCGATGAGCTCCTaGTCCGTACGCAGGATCTCCTGTGCCTCCACGGCA +
Preference number: 4 (lower is better)
Translates to: ASAGRRTVAMSS*SVRRISCASTA
Trigger: TGCCGTGGAGGCACAGGAGATCCTGCGTACGGACAAGGAGCTCATCGCTACAGTGCGCCGGCCTGCCGAGGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR TCA 90 bp TGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCTGCCCATCGCCTCGATaGCTGCCGCTTCCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: WGAGTTGHSQHPCQDAWVCPSPR*LPLPPP
Trigger: GGGAGGCGGAAGCGGCAGTCATCGAGGCGATGGGCA...GACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp CTGGGCCCTGCAGGTCATGGCTGCCCAGACCTAGAGGGGCAGCAGCAGGTGAGGCAGGAGAGAGGACAGTaGCCGTCCTACCCAGAACCC +
Preference number: 4 (lower is better)
Translates to: LGPAGHGCPDLEGQQQVRQERGQ*PSYPEP
Trigger: GGGTTCTGGGTAGGACGGTCACTGTCCTCTCTCCTG...CCTCACCTGCTGCTGCCCCTCTAGGTCTGGGCAGCCATGACCTGCAGGGCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp ACAGGGTATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCCGGCAATCTGCTGGATaGGGTGGGCCTCGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: TGYERWLGPWVDEGKDSVRQSAG*GGPRPR
Trigger: CCGAGGCCGAGGCCCACCGCATCCAGCAGATTGCCG...GACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp CGGCGCACTGTAGCGATGAGCTCCTTGTCCGTACGCAGGATCTCCTGTGCCTCCCCCTCGGCAATCTGCTaGATGCGGTGGGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: RRTVAMSSLSVRRISCASPSAIC*MRWASA
Trigger: GGCCGAGGCCCACCGCATCCAGCAGATTGCCGAGGG...GGAGGCACAGGAGATCCTGCGTACGGACAAGGAGCTCATCGCTACAGTGCGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR CCA 90 bp CCAGGGTGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTCGCTGGCTGGGGCCTTaGGTGGATGAGGGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: PGWGAGTTGHSQHPCQDARWLGP*VDEGKD
Trigger: GTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCG...AGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCACCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp CTGGGCCCTGCAGGTCATGGCTGCCCAGACCTAGAGGGGCAGCAGCAGGTGAGGAAGGGCTCTGGGGTCTaGCCAGGCTACAGCACTCGA +
Preference number: 4 (lower is better)
Translates to: LGPAGHGCPDLEGQQQVRKGSGV*PGYSTR
Trigger: TCGAGTGCTGTAGCCTGGCCAGACCCCAGAGCCCTT...CCTCACCTGCTGCTGCCCCTCTAGGTCTGGGCAGCCATGACCTGCAGGGCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp CTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTTGCCCATCGCCTCGATaGCTGCCGCTTCCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LDIHSTPAKTLGSWALLPCPSPR*LPLPPP
Trigger: GGGAGGCGGAAGCGGCAGTCATCGAGGCGATGGGCA...AGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp CATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTCCATTGGGCCGGGTGGCTGCTaGAGAGAGTGGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: HSQHPCQDAWVLGSSASIGPGGC*REWACR
Trigger: CCTGCAGGCCCACTCTCTTCAGCAGCCACCCGGCCC...AATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp ATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCTCTGGGCGGGGCCTTGGGTGGATaGGGGGAAGGACAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: MSAGWGLGWMRGRTVSLGGALGG*GEGQCL
Trigger: GAGACACTGTCCTTCCCCTCATCCACCCAAGGCCCC...GCCCAGAGACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp CCAGGGTGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTCCTGCCGGATCTTCTaGTGTTCACGGGCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: PGWGAGTTGHSQHPCQDASCRIF*CSRAPC
Trigger: GCAGGGGGCCCGTGAACAGCAGAAGATCCGGCAGGA...AGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCACCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp CTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTCGGCAATCTGCTGGATaGGGTGGGCCTCGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: LDIHSTPAKTLGSWALLPRQSAG*GGPRPR
Trigger: CCGAGGCCGAGGCCCACCGCATCCAGCAGATTGCCG...AGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp CCAGGGTGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTCACCCTCGGCAATCTaGTGGATGCGGTGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: PGWGAGTTGHSQHPCQDASPSAI*WMRWAS
Trigger: CGAGGCCCACCGCATCCAGCAGATTGCCGAGGGTGA...AGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCACCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp TCACCCTCGGCAATCTGCTGGATGCGGTGGGCCTCGGCCTCGGCAGGCCGGCGCCAAGGCCATCTTGGCTaGATCCCCGTATTTCTGGTA +
Preference number: 4 (lower is better)
Translates to: SPSAICWMRWASASAGRRQGHLG*IPVFLV
Trigger: TACCAGAAATACGGGGATGCAGCCAAGATGGCCTTG...GCGCCGGCCTGCCGAGGCCGAGGCCCACCGCATCCAGCAGATTGCCGAGGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR CCA 90 bp GGGTGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGCCTCCCGCACCAGCTTaGCAAACTGGTCCCGGTCCT +
Preference number: 4 (lower is better)
Translates to: GWGAGTTGHSQHPCQDAWPPAPA*QTGPGP
Trigger: AGGACCGGGACCAGTTTGCCAAGCTGGTGCGGGAGG...CCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp ACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCCCCTCGGCAATCTGCTaGATGCGGTGGGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: TGHSQHPCQDAWVLGSSAPSAIC*MRWASA
Trigger: GGCCGAGGCCCACCGCATCCAGCAGATTGCCGAGGG...GGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp ACAGGGTATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCCGCTGGCTGGGGCCTTaGGTGGATGAGGGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: TGYERWLGPWVDEGKDSVRWLGP*VDEGKD
Trigger: GTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCG...GACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR CAA 72 bp GCTTCTGCCTTGAGCTTCATCCGCTCAGCCTCTGCCTaGCCCATCGCCTCGATGACTGCCGCTTCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: ASALSFIRSASA*PIASMTAASAS
Trigger: GGAGGCGGAAGCGGCAGTCATCGAGGCGATGGGCAAGGCAGAGGCTGAGCGGATGAAGCTCAAGGCAGAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR TCA 90 bp TGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGTGCCCATCGCCTCGATaGCTGCCGCTTCCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: WGSATSKPQTRHAASTCRCPSPR*LPLPPP
Trigger: GGGAGGCGGAAGCGGCAGTCATCGAGGCGATGGGCA...CCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp TTCACCTTTTCACCCTCGGCAATCTGCTGGATGCGGTGGGCCTCGGCCTCGGCAGGGGCCTTGGGTGGATaGGGGGAAGGACAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: FTFSPSAICWMRWASASAGALGG*GEGQCL
Trigger: GAGACACTGTCCTTCCCCTCATCCACCCAAGGCCCC...TGCCGAGGCCGAGGCCCACCGCATCCAGCAGATTGCCGAGGGTGAAAAGGTGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000580805.5
CDS-3UTR TCA 90 bp CCAGGGTGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTAGAAAGGACAGGGTATaGGCGCTGGCTGGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: PGWGAGTTGHSQHPCQDARKDRV*ALAGAL
Trigger: CAAGGCCCCAGCCAGCGCTCATACCCTGTCCTTTCT...AGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCACCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp CATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTCCATTCCACCGTGTGGCAATTaGCCATGGCGCCGGCGGCAC +
Preference number: 4 (lower is better)
Translates to: HSQHPCQDAWVLGSSASIPPCGN*PWRRRH
Trigger: GTGCCGCCGGCGCCATGGGCAATTGCCACACGGTGG...AATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp GGTCTGGCCAGGCTACAGCACTCGATTCTGTACAGGGTTGGCACAGCCTTGTCCCCACCGTGTGGCAATTaGCCATGGCGCCGGCGGCAC +
Preference number: 4 (lower is better)
Translates to: GLARLQHSILYRVGTALSPPCGN*PWRRRH
Trigger: GTGCCGCCGGCGCCATGGGCAATTGCCACACGGTGG...GGACAAGGCTGTGCCAACCCTGTACAGAATCGAGTGCTGTAGCCTGGCCAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp TGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCGCCAACATCAGGGGCTaGCACCTCCCGCACCAGCTT +
Preference number: 4 (lower is better)
Translates to: WGAGTTGHSQHPCQDAWVANIRG*HLPHQL
Trigger: AAGCTGGTGCGGGAGGTGGCAGCCCCTGATGTTGGC...GACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp ACAGGGTATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCTGCACCACGGCAGTCTaGGTCTTGCCCAGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: TGYERWLGPWVDEGKDSVCTTAV*VLPREL
Trigger: GAGCTCCCTGGGCAAGACGCAGACTGCCGTGGTGCA...GACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp ACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCAGCTTCCCGGATGCCTaGGTCCCGTTCAGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: TGHSQHPCQDAWVLGSSASFPDA*VPFSLG
Trigger: GCCGAGGCTGAACGGGACGCAGGCATCCGGGAAGCT...GGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp ATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCTCTGGGCACTCAGCTTCCCGGATaGCTGCGTCCCGTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: MSAGWGLGWMRGRTVSLGTQLPG*LRPVQP
Trigger: AGGCTGAACGGGACGCAGGCATCCGGGAAGCTGAGT...GCCCAGAGACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp GGGTATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCTCTTCCTGCCGGATCTTCTaGTGTTCACGGGCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: GYERWLGPWVDEGKDSVSSCRIF*CSRAPC
Trigger: GCAGGGGGCCCGTGAACAGCAGAAGATCCGGCAGGA...AGAGACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp AGACAGAGGATTGGGTTGCTTCCCCATGGCTGGAACCCCATCACTCTGGCCAGGCGGCAATCTGCTGGATaGGGTGGGCCTCGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: RQRIGLLPHGWNPITLARRQSAG*GGPRPR
Trigger: CCGAGGCCGAGGCCCACCGCATCCAGCAGATTGCCG...CCTGGCCAGAGTGATGGGGTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp AATCTCTTCCTGCCGGATCTTCTGCTGTTCACGGGCCCCCTGCAGCTCATAGGCCGGCAATCTGCTGGATaGGGTGGGCCTCGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: NLFLPDLLLFTGPLQLIGRQSAG*GGPRPR
Trigger: CCGAGGCCGAGGCCCACCGCATCCAGCAGATTGCCG...GCCTATGAGCTGCAGGGGGCCCGTGAACAGCAGAAGATCCGGCAGGAAGAGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR GCA 90 bp TGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCTCACCCTCGGCAATCTaGTGGATGCGGTGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: WGAGTTGHSQHPCQDAWVSPSAI*WMRWAS
Trigger: CGAGGCCCACCGCATCCAGCAGATTGCCGAGGGTGA...GACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp ACGCAGCACTTCTGGTCCCTTCGAGATAAGGCACCAGAGTCAGTAACGTTCCCGCAACAGCAGCGGGTCTaGAGCGCCGGCCGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: TQHFWSLRDKAPESVTFPQQQRV*SAGRAQ
Trigger: CTGGGCGCGGCCGGCGCTGCAGACCCGCTGCTGTTG...CGGGAACGTTACTGACTCTGGTGCCTTATCTCGAAGGGACCAGAAGTGCTGCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394908.9
CDS-3UTR CCA 90 bp GGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGATGTGGCAATTGCCCATaGCGCCGGCGGCACGGAGGG +
Preference number: 4 (lower is better)
Translates to: GAVQHPSPRPDMQHPHAGCGNCP*RRRHGG
Trigger: CCCTCCGTGCCGCCGGCGCCATGGGCAATTGCCACA...TCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp GCAGTGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGTGTGGCAATTGCCCATaGCGCCGGCGGCACGGAGGG +
Preference number: 4 (lower is better)
Translates to: AVGQCNIQAPDQTCSIHMCGNCP*RRRHGG
Trigger: CCCTCCGTGCCGCCGGCGCCATGGGCAATTGCCACA...CATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp ACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCCCACCAGCGCCTCGTTaGGCCCCACCGTGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: TGHSQHPCQDAWVLGSSAPPAPR*APPCGN
Trigger: ATTGCCACACGGTGGGGCCCAACGAGGCGCTGGTGG...GGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp GGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTCAGGGTCCCGAGGATaGAGCGCAGATGTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: GELGPLDIHSTPAKTLGSSGSRG*SADVPP
Trigger: TGGAGGGACATCTGCGCTCCATCCTCGGGACCCTGA...GGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp AGACAGAGGATTGGGTTGCTTCCCCATGGCTGGAACCCCATCACTCTGGCCAGGCCCTCGGCAATCTGCTaGATGCGGTGGGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: RQRIGLLPHGWNPITLARPSAIC*MRWASA
Trigger: GGCCGAGGCCCACCGCATCCAGCAGATTGCCGAGGG...CCTGGCCAGAGTGATGGGGTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp AGGAGACAGAGGATTGGGTTGCTTCCCCATGGCTGGAACCCCATCACTCTGGCCGGAGGGAGGGCCGGGTaGCTGCTGAAGAGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: RRQRIGLLPHGWNPITLAGGRAG*LLKRVG
Trigger: GCCCACTCTCTTCAGCAGCCACCCGGCCCTCCCTCC...GGCCAGAGTGATGGGGTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp ATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCTCTGGGCGGGAGCTGGGACCACTaGACATTCACAGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: MSAGWGLGWMRGRTVSLGGSWDH*TFTAPL
Trigger: CAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCC...GCCCAGAGACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp TTCACCTTTTCACCCTCGGCAATCTGCTGGATGCGGTGGGCCTCGGCCTCGGCAACCACAACAGCCCCCTaGAACCACCAGCGCCTCGTT +
Preference number: 4 (lower is better)
Translates to: FTFSPSAICWMRWASASATTTAP*NHQRLV
Trigger: AACGAGGCGCTGGTGGTTTCAGGGGGCTGTTGTGGT...TGCCGAGGCCGAGGCCCACCGCATCCAGCAGATTGCCGAGGGTGAAAAGGTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR TCA 90 bp CCAGGGTGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTCAGCCAGAGATGGCCTaGACACGCAGCACTTCTGGT +
Preference number: 4 (lower is better)
Translates to: PGWGAGTTGHSQHPCQDAQPEMA*TRSTSG
Trigger: ACCAGAAGTGCTGCGTGTTCAGGCCATCTCTGGCTG...AGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCACCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp TGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCAGGAGAGAGGACAGTaGCCGTCCTACCCAGAACCC +
Preference number: 4 (lower is better)
Translates to: WGAGTTGHSQHPCQDAWVQERGQ*PSYPEP
Trigger: GGGTTCTGGGTAGGACGGTCACTGTCCTCTCTCCTG...GACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp CAGGGTATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCTAGAAAGGACAGGGTATaGGCGCTGGCTGGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: QGMSAGWGLGWMRGRTVSRKDRV*ALAGAL
Trigger: CAAGGCCCCAGCCAGCGCTCATACCCTGTCCTTTCT...AGACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp AAACTTAGCAGAGTTGGGACCAAACCGCACCGCCCCAGCAGGAACATGCCCATGCCACCGTGTGGCAATTaGCCATGGCGCCGGCGGCAC +
Preference number: 4 (lower is better)
Translates to: KLSRVGTKPHRPSRNMPMPPCGN*PWRRRH
Trigger: GTGCCGCCGGCGCCATGGGCAATTGCCACACGGTGG...CATGGGCATGTTCCTGCTGGGGCGGTGCGGTTTGGTCCCAACTCTGCTAAGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp GGGTGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGGATCTCAATGCCCATaGGGCCAACATCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GWGAGTTGHSQHPCQDAWGSQCP*GQHQGL
Trigger: CAGCCCCTGATGTTGGCCGCATGGGCATTGAGATCC...CCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp CAGTGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGCTTCCCGGATGCCTaGGTCCCGTTCAGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: QWGSATSKPQTRHAASTCSFPDA*VPFSLG
Trigger: GCCGAGGCTGAACGGGACGCAGGCATCCGGGAAGCT...GCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp ACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTCCTGCCGGATCTTCTaGTGTTCACGGGCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: TGHSQHPCQDAWVLGSSASCRIF*CSRAPC
Trigger: GCAGGGGGCCCGTGAACAGCAGAAGATCCGGCAGGA...GGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp TGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCATCCGCTCAGCCTCTaGCTTGCCCATCGCCTCGAT +
Preference number: 4 (lower is better)
Translates to: WGAGTTGHSQHPCQDAWVHPLSL*LAHRLD
Trigger: ATCGAGGCGATGGGCAAGGCAGAGGCTGAGCGGATG...GACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp ACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCCCTGCAGGTCATGGCTaGCCAGACCTAGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: TGHSQHPCQDAWVLGSSAPAGHG*PDLEGQ
Trigger: CTGCCCCTCTAGGTCTGGGCAGCCATGACCTGCAGG...GGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp GGGTATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCTCTAGTGTCTCTGGGCCCTaGAGGTCATGGCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: GYERWLGPWVDEGKDSVSSVSGP*RSWLPR
Trigger: TCTGGGCAGCCATGACCTGCAGGGCCCAGAGACACT...AGAGACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp CAGGGTATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCTGAGGCCTTGCCTCTGTaGCCTTGGGGTCAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: QGMSAGWGLGWMRGRTVSEALPL*PWGQGE
Trigger: TTCTCCCTGACCCCAAGGGCACAGAGGCAAGGCCTC...AGACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp GGGTGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGCATTCACAGCACCCCTaGCAAGACGCTTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: GWGAGTTGHSQHPCQDAWHSQHP*QDAWVL
Trigger: CAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATG...CCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp GAGGATCTCAATGCCCATGCGGCCAACATCAGGGGCTGCCACCTCCCGCACCAGCATTCACAGCACCCCTaGCAAGACGCTTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: EDLNAHAANIRGCHLPHQHSQHP*QDAWVL
Trigger: CAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATG...CTGGTGCGGGAGGTGGCAGCCCCTGATGTTGGCCGCATGGGCATTGAGATCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580805.5
CDS-3UTR GCA 90 bp CTGGGCCCTGCAGGTCATGGCTGCCCAGACCTAGAGGGGCAGCAGCAGGTGAGGCATGCAGCATCCACATaGAGGAAGAGCTACACAGGC +
Preference number: 4 (lower is better)
Translates to: LGPAGHGCPDLEGQQQVRHAAST*RKSYTG
Trigger: GCCTGTGTAGCTCTTCCTGCATGTGGATGCTGCATG...CCTCACCTGCTGCTGCCCCTCTAGGTCTGGGCAGCCATGACCTGCAGGGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp GGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAAGTGTGGCAATTGCCCATaGCGCCGGCGGCACGGAGGG +
Preference number: 4 (lower is better)
Translates to: GSATSKPQTRHAASTCRKCGNCP*RRRHGG
Trigger: CCCTCCGTGCCGCCGGCGCCATGGGCAATTGCCACA...CTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp TGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGTTGGGCCCCACCGTGTaGCAATTGCCCATGGCGCCG +
Preference number: 4 (lower is better)
Translates to: WGSATSKPQTRHAASTCRLGPTV*QLPMAP
Trigger: CGGCGCCATGGGCAATTGCCACACGGTGGGGCCCAA...CCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp GGCCCCCTGCAGCTCATAGGCCAACTGGGCCTCAGCTGTCTTGATGTTAACCTCCCACCAGCGCCTCGTTaGGCCCCACCGTGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: GPLQLIGQLGLSCLDVNLPPAPR*APPCGN
Trigger: ATTGCCACACGGTGGGGCCCAACGAGGCGCTGGTGG...GAGGTTAACATCAAGACAGCTGAGGCCCAGTTGGCCTATGAGCTGCAGGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR CCA 90 bp GTCCCGGTCCTGATAAATCTGCTCCACTGTCAGGGTCCCGAGGATGGAGCGCAGCCTCCCGCACCAGCTTaGCAAACTGGTCCCGGTCCT +
Preference number: 4 (lower is better)
Translates to: VPVLINLLHCQGPEDGAQPPAPA*QTGPGP
Trigger: AGGACCGGGACCAGTTTGCCAAGCTGGTGCGGGAGG...CTGCGCTCCATCCTCGGGACCCTGACAGTGGAGCAGATTTATCAGGACCGGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580805.5
CDS-3UTR CCA 90 bp CTGGGCCCTGCAGGTCATGGCTGCCCAGACCTAGAGGGGCAGCAGCAGGTGAGGGCACCAAGGCCATCTTaGCTGCATCCCCGTATTTCT +
Preference number: 4 (lower is better)
Translates to: LGPAGHGCPDLEGQQQVRAPRPS*LHPRIS
Trigger: AGAAATACGGGGATGCAGCCAAGATGGCCTTGGTGC...CCTCACCTGCTGCTGCCCCTCTAGGTCTGGGCAGCCATGACCTGCAGGGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp GCAGTGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCGCTGGCTGGGGCCTTaGGTGGATGAGGGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: AVGQCNIQAPDQTCSIHMRWLGP*VDEGKD
Trigger: GTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCG...CATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp GGGTATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCTCTACAGGGTATGAGCGCTaGCTGGGGCCTTGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: GYERWLGPWVDEGKDSVSTGYER*LGPWVD
Trigger: ATCCACCCAAGGCCCCAGCCAGCGCTCATACCCTGT...AGAGACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp CCAGGGTGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTGGCCAGGAAGAAAGATaGCACAAGGGCTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: PGWGAGTTGHSQHPCQDAGQEER*HKGSGV
Trigger: GACCCCAGAGCCCTTGTGCCATCTTTCTTCCTGGCC...AGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCACCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp ACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCCCCTGCCAAGACGCTTaGGTCCTGGGCTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: TGHSQHPCQDAWVLGSSAPCQDA*VLGSSA
Trigger: GGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGG...GGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp GGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCCTCCTCACTGAAGGCTaGCTTTTGCAGCTCGAAGGC +
Preference number: 4 (lower is better)
Translates to: GELGPLDIHSTPAKTLGSLLTEG*LLQLEG
Trigger: GCCTTCGAGCTGCAAAAGTCAGCCTTCAGTGAGGAG...GGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp CATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTCCATTGGGGCCTTGGGTGGATaGGGGGAAGGACAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: HSQHPCQDAWVLGSSASIGALGG*GEGQCL
Trigger: GAGACACTGTCCTTCCCCTCATCCACCCAAGGCCCC...AATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp GGTCTGGCCAGGCTACAGCACTCGATTCTGTACAGGGTTGGCACAGCCTTGTCCGGGGCCTTGGGTGGATaGGGGGAAGGACAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: GLARLQHSILYRVGTALSGALGG*GEGQCL
Trigger: GAGACACTGTCCTTCCCCTCATCCACCCAAGGCCCC...GGACAAGGCTGTGCCAACCCTGTACAGAATCGAGTGCTGTAGCCTGGCCAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp GCAGTGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGGCCAACATCAGGGGCTaGCACCTCCCGCACCAGCTT +
Preference number: 4 (lower is better)
Translates to: AVGQCNIQAPDQTCSIHMANIRG*HLPHQL
Trigger: AAGCTGGTGCGGGAGGTGGCAGCCCCTGATGTTGGC...CATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp GTCCCGTTCAGCCTCGGCCACGCCAATGTCAGCATCTCTCTGCACCACGGCAGTGGATCTCAATGCCCATaGGGCCAACATCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VPFSLGHANVSISLHHGSGSQCP*GQHQGL
Trigger: CAGCCCCTGATGTTGGCCGCATGGGCATTGAGATCC...ACTGCCGTGGTGCAGAGAGATGCTGACATTGGCGTGGCCGAGGCTGAACGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR GCA 90 bp GGTCTGGCCAGGCTACAGCACTCGATTCTGTACAGGGTTGGCACAGCCTTGTCCTGCACCACGGCAGTCTaGGTCTTGCCCAGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: GLARLQHSILYRVGTALSCTTAV*VLPREL
Trigger: GAGCTCCCTGGGCAAGACGCAGACTGCCGTGGTGCA...GGACAAGGCTGTGCCAACCCTGTACAGAATCGAGTGCTGTAGCCTGGCCAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp AAACTTAGCAGAGTTGGGACCAAACCGCACCGCCCCAGCAGGAACATGCCCATGAGCTTCCCGGATGCCTaGGTCCCGTTCAGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: KLSRVGTKPHRPSRNMPMSFPDA*VPFSLG
Trigger: GCCGAGGCTGAACGGGACGCAGGCATCCGGGAAGCT...CATGGGCATGTTCCTGCTGGGGCGGTGCGGTTTGGTCCCAACTCTGCTAAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp CTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTACTCAGCTTCCCGGATaGCTGCGTCCCGTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: LDIHSTPAKTLGSWALLPTQLPG*LRPVQP
Trigger: AGGCTGAACGGGACGCAGGCATCCGGGAAGCTGAGT...AGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp AGACAGAGGATTGGGTTGCTTCCCCATGGCTGGAACCCCATCACTCTGGCCAGGTCCTGCCGGATCTTCTaGTGTTCACGGGCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: RQRIGLLPHGWNPITLARSCRIF*CSRAPC
Trigger: GCAGGGGGCCCGTGAACAGCAGAAGATCCGGCAGGA...CCTGGCCAGAGTGATGGGGTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp ACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTCCATTCACCCTCGGCAATCTaGTGGATGCGGTGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: TFTAPLPRRLGPGLFCLHSPSAI*WMRWAS
Trigger: CGAGGCCCACCGCATCCAGCAGATTGCCGAGGGTGA...ATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp TGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTCAGCCTCTGCCTGTaGCAAGAGGACCTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: WGAGTTGHSQHPCQDAWVLSLCL*QEDLLH
Trigger: GTGAAGCAGGTCCTCTTGGCACAGGCAGAGGCTGAG...GACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp CGTTCAGCCTCGGCCACGCCAATGTCAGCATCTCTCTGCACCACGGCAGTCTGCCTCAGCCTCTGCCTGTaGCAAGAGGACCTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: RSASATPMSASLCTTAVCLSLCL*QEDLLH
Trigger: GTGAAGCAGGTCCTCTTGGCACAGGCAGAGGCTGAG...GCAGACTGCCGTGGTGCAGAGAGATGCTGACATTGGCGTGGCCGAGGCTGAACG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR GCA 90 bp GGGTATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCTCTCTCAGCCTCTGCCTGTaGCAAGAGGACCTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: GYERWLGPWVDEGKDSVSLSLCL*QEDLLH
Trigger: GTGAAGCAGGTCCTCTTGGCACAGGCAGAGGCTGAG...AGAGACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp ACAGGGTATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCCCGCCTCCCCGATTTTaGGGATCTTCTCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: TGYERWLGPWVDEGKDSVPPPRF*GSSQPL
Trigger: CAGAGGCTGAGAAGATCCGCAAAATCGGGGAGGCGG...GACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp TGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGCATCGCCTCGATGACTaGCGCTTCCGCCTCCCCGAT +
Preference number: 4 (lower is better)
Translates to: WGSATSKPQTRHAASTCRHRLDD*RFRLPD
Trigger: ATCGGGGAGGCGGAAGCGGCAGTCATCGAGGCGATG...CCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp CTGGGCCCTGCAGGTCATGGCTGCCCAGACCTAGAGGGGCAGCAGCAGGTGAGGTTTCTGGTAGGCTTCTaGCTTGAGCTTCATCCGCTC +
Preference number: 4 (lower is better)
Translates to: LGPAGHGCPDLEGQQQVRFLVGF*LELHPL
Trigger: GAGCGGATGAAGCTCAAGGCAGAAGCCTACCAGAAA...CCTCACCTGCTGCTGCCCCTCTAGGTCTGGGCAGCCATGACCTGCAGGGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp GGTCTGGCCAGGCTACAGCACTCGATTCTGTACAGGGTTGGCACAGCCTTGTCCCCTGCAGGTCATGGCTaGCCAGACCTAGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GLARLQHSILYRVGTALSPAGHG*PDLEGQ
Trigger: CTGCCCCTCTAGGTCTGGGCAGCCATGACCTGCAGG...GGACAAGGCTGTGCCAACCCTGTACAGAATCGAGTGCTGTAGCCTGGCCAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp GATGGCACAAGGGCTCTGGGGTCTGGCCAGGCTACAGCACTCGATTCTGTACAGCCTGCAGGTCATGGCTaGCCAGACCTAGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: DGTRALGSGQATALDSVQPAGHG*PDLEGQ
Trigger: CTGCCCCTCTAGGTCTGGGCAGCCATGACCTGCAGG...CTGTACAGAATCGAGTGCTGTAGCCTGGCCAGACCCCAGAGCCCTTGTGCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp GGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCCAACACCCAGGACAGTaGAGCCCTAGCAGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: GELGPLDIHSTPAKTLGSQHPGQ*SPSRKK
Trigger: CTTCTTCCTGCTAGGGCTGCACTGTCCTGGGTGTTG...GGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp GGGTGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGACAGAGGATTGGGTTaGTTCCCCATGGCTGGAACC +
Preference number: 4 (lower is better)
Translates to: GWGAGTTGHSQHPCQDAWDRGLG*FPMAGT
Trigger: GGTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTC...CCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp GCCTCCATTGGAGCAAGGAGACAGAGGATTGGGTTGCTTCCCCATGGCTGGAACCCACCAGCGCCTCGTTaGGCCCCACCGTGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: ASIGARRQRIGLLPHGWNPPAPR*APPCGN
Trigger: ATTGCCACACGGTGGGGCCCAACGAGGCGCTGGTGG...GTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCTCCTTGCTCCAATGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp TGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGCCTCCCGCACCAGCTTaGCAAACTGGTCCCGGTCCT +
Preference number: 4 (lower is better)
Translates to: WGSATSKPQTRHAASTCRPPAPA*QTGPGP
Trigger: AGGACCGGGACCAGTTTGCCAAGCTGGTGCGGGAGG...CCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp AGACAGAGGATTGGGTTGCTTCCCCATGGCTGGAACCCCATCACTCTGGCCAGGCCTCCCGCACCAGCTTaGCAAACTGGTCCCGGTCCT +
Preference number: 4 (lower is better)
Translates to: RQRIGLLPHGWNPITLARPPAPA*QTGPGP
Trigger: AGGACCGGGACCAGTTTGCCAAGCTGGTGCGGGAGG...CCTGGCCAGAGTGATGGGGTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp CTAGACCCTCATCTCAGAAAACTTAGCAGAGTTGGGACCAAACCGCACCGCCCCCCCTCGGCAATCTGCTaGATGCGGTGGGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: LDPHLRKLSRVGTKPHRPPSAIC*MRWASA
Trigger: GGCCGAGGCCCACCGCATCCAGCAGATTGCCGAGGG...GGGGCGGTGCGGTTTGGTCCCAACTCTGCTAAGTTTTCTGAGATGAGGGTCTAG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp CCAGGGTGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTATTTTGGCAGCAATCTaGGGCAGGGCCTCTAGCACC +
Preference number: 4 (lower is better)
Translates to: PGWGAGTTGHSQHPCQDAILAAI*GRASST
Trigger: GGTGCTAGAGGCCCTGCCCCAGATTGCTGCCAAAAT...AGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCACCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp CTGGGCCCTGCAGGTCATGGCTGCCCAGACCTAGAGGGGCAGCAGCAGGTGAGGAACACGCAGCACTTCTaGTCCCTTCGAGATAAGGCA +
Preference number: 4 (lower is better)
Translates to: LGPAGHGCPDLEGQQQVRNTQHF*SLRDKA
Trigger: TGCCTTATCTCGAAGGGACCAGAAGTGCTGCGTGTT...CCTCACCTGCTGCTGCCCCTCTAGGTCTGGGCAGCCATGACCTGCAGGGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp CATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTCCATTGGTATGAGCGCTGGCTaGGGCCTTGGGTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: HSQHPCQDAWVLGSSASIGMSAG*GLGWMR
Trigger: CCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACC...AATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp CCCAGACCAGACATGCAGCATCCACATGCAGGAAGAGCTACACAGGCTGGGGCAGGTATGAGCGCTGGCTaGGGCCTTGGGTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: PRPDMQHPHAGRATQAGAGMSAG*GLGWMR
Trigger: CCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACC...TGCCCCAGCCTGTGTAGCTCTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp TTCACCTTTTCACCCTCGGCAATCTGCTGGATGCGGTGGGCCTCGGCCTCGGCATTGCTTCCCCATGGCTaGAACCCCATCACTCTGGCC +
Preference number: 4 (lower is better)
Translates to: FTFSPSAICWMRWASASALLPHG*NPITLA
Trigger: GGCCAGAGTGATGGGGTTCCAGCCATGGGGAAGCAA...TGCCGAGGCCGAGGCCCACCGCATCCAGCAGATTGCCGAGGGTGAAAAGGTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580805.5
CDS-3UTR CCA 90 bp CTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTGGGAGCTGGGACCACTaGACATTCACAGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: LDIHSTPAKTLGSWALLPGSWDH*TFTAPL
Trigger: CAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCC...AGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp GCGCACTGTAGCGATGAGCTCCTTGTCCGTACGCAGGATCTCCTGTGCCTCCACGGGAGCTGGGACCACTaGACATTCACAGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: AHCSDELLVRTQDLLCLHGSWDH*TFTAPL
Trigger: CAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCC...GTGGAGGCACAGGAGATCCTGCGTACGGACAAGGAGCTCATCGCTACAGTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580805.5
CDS-3UTR TCA 90 bp ACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTCCATACCACAACAGCCCCCTaGAACCACCAGCGCCTCGTT +
Preference number: 4 (lower is better)
Translates to: TFTAPLPRRLGPGLFCLHTTTAP*NHQRLV
Trigger: AACGAGGCGCTGGTGGTTTCAGGGGGCTGTTGTGGT...ATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp TGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGACCACAACAGCCCCCTaGAACCACCAGCGCCTCGTT +
Preference number: 4 (lower is better)
Translates to: WGSATSKPQTRHAASTCRTTTAP*NHQRLV
Trigger: AACGAGGCGCTGGTGGTTTCAGGGGGCTGTTGTGGT...CCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp AGGAGACAGAGGATTGGGTTGCTTCCCCATGGCTGGAACCCCATCACTCTGGCCACCACAACAGCCCCCTaGAACCACCAGCGCCTCGTT +
Preference number: 4 (lower is better)
Translates to: RRQRIGLLPHGWNPITLATTTAP*NHQRLV
Trigger: AACGAGGCGCTGGTGGTTTCAGGGGGCTGTTGTGGT...GGCCAGAGTGATGGGGTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp ATGCCTGCGTCCCGTTCAGCCTCGGCCACGCCAATGTCAGCATCTCTCTGCACCCTCCTCACTGAAGGCTaGCTTTTGCAGCTCGAAGGC +
Preference number: 4 (lower is better)
Translates to: MPASRSASATPMSASLCTLLTEG*LLQLEG
Trigger: GCCTTCGAGCTGCAAAAGTCAGCCTTCAGTGAGGAG...GGTGCAGAGAGATGCTGACATTGGCGTGGCCGAGGCTGAACGGGACGCAGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR TCA 90 bp CTGGGCCCTGCAGGTCATGGCTGCCCAGACCTAGAGGGGCAGCAGCAGGTGAGGAGACACGCAGGGAGATaGGACACAAACCTGATGAAA +
Preference number: 4 (lower is better)
Translates to: LGPAGHGCPDLEGQQQVRRHAGR*DTNLMK
Trigger: TTTCATCAGGTTTGTGTCTCATCTCCCTGCGTGTCT...CCTCACCTGCTGCTGCCCCTCTAGGTCTGGGCAGCCATGACCTGCAGGGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp GATGGCACAAGGGCTCTGGGGTCTGGCCAGGCTACAGCACTCGATTCTGTACAGCAGGAGAGAGGACAGTaGCCGTCCTACCCAGAACCC +
Preference number: 4 (lower is better)
Translates to: DGTRALGSGQATALDSVQQERGQ*PSYPEP
Trigger: GGGTTCTGGGTAGGACGGTCACTGTCCTCTCTCCTG...CTGTACAGAATCGAGTGCTGTAGCCTGGCCAGACCCCAGAGCCCTTGTGCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp CAGTGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCCAGGAGAGAGGACAGTaGCCGTCCTACCCAGAACCC +
Preference number: 4 (lower is better)
Translates to: QWGSATSKPQTRHAASTCQERGQ*PSYPEP
Trigger: GGGTTCTGGGTAGGACGGTCACTGTCCTCTCTCCTG...GCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp AGGAGACAGAGGATTGGGTTGCTTCCCCATGGCTGGAACCCCATCACTCTGGCCAGAAAGGACAGGGTATaGGCGCTGGCTGGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: RRQRIGLLPHGWNPITLARKDRV*ALAGAL
Trigger: CAAGGCCCCAGCCAGCGCTCATACCCTGTCCTTTCT...GGCCAGAGTGATGGGGTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp CTGCACAACCTCAATCTCAATCTCTTCCTGCCGGATCTTCTGCTGTTCACGGGCCCACCGTGTGGCAATTaGCCATGGCGCCGGCGGCAC +
Preference number: 4 (lower is better)
Translates to: LHNLNLNLFLPDLLLFTGPPCGN*PWRRRH
Trigger: GTGCCGCCGGCGCCATGGGCAATTGCCACACGGTGG...GCCCGTGAACAGCAGAAGATCCGGCAGGAAGAGATTGAGATTGAGGTTGTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR GCA 90 bp TGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCTCCTCGCAGCGGGGCTaGAACGTCATAATCTCTAGG +
Preference number: 4 (lower is better)
Translates to: WGAGTTGHSQHPCQDAWVSSQRG*NVIISR
Trigger: CCTAGAGATTATGACGTTGCAGCCCCGCTGCGAGGA...GACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
CDS-3UTR GCA 90 bp ATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCTCTGGGCTGTCCCTCCAGGGTCTaGAGGACGACGTTTTTGATG +
Preference number: 4 (lower is better)
Translates to: MSAGWGLGWMRGRTVSLGCPSRV*RTTFLM
Trigger: CATCAAAAACGTCGTCCTGCAGACCCTGGAGGGACA...GCCCAGAGACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp CAGGGTCCCGAGGATGGAGCGCAGATGTCCCTCCAGGGTCTGCAGGACGACGTTTGTCCCTCCAGGGTCTaGAGGACGACGTTTTTGATG +
Preference number: 4 (lower is better)
Translates to: QGPEDGAQMSLQGLQDDVCPSRV*RTTFLM
Trigger: CATCAAAAACGTCGTCCTGCAGACCCTGGAGGGACA...AACGTCGTCCTGCAGACCCTGGAGGGACATCTGCGCTCCATCCTCGGGACCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580805.5
CDS-3UTR GCA 90 bp TCTCAATCTCTTCCTGCCGGATCTTCTGCTGTTCACGGGCCCCCTGCAGCTCATTGCACCACGGCAGTCTaGGTCTTGCCCAGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: SQSLPAGSSAVHGPPAAHCTTAV*VLPREL
Trigger: GAGCTCCCTGGGCAAGACGCAGACTGCCGTGGTGCA...ATGAGCTGCAGGGGGCCCGTGAACAGCAGAAGATCCGGCAGGAAGAGATTGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR GCA 90 bp TGCACACCAGTGGCCTTCTTGATCAGGGGTATCTTAGACAGGTCCACGCCTGTGAGCTTCCCGGATGCCTaGGTCCCGTTCAGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: CTPVAFLIRGILDRSTPVSFPDA*VPFSLG
Trigger: GCCGAGGCTGAACGGGACGCAGGCATCCGGGAAGCT...CACAGGCGTGGACCTGTCTAAGATACCCCTGATCAAGAAGGCCACTGGTGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580805.5
CDS-3UTR GCA 90 bp TTCACCTTTTCACCCTCGGCAATCTGCTGGATGCGGTGGGCCTCGGCCTCGGCACCAGCATCTCCTTCTTaGACTCAGCTTCCCGGATGC +
Preference number: 4 (lower is better)
Translates to: FTFSPSAICWMRWASASAPASPS*TQLPGC
Trigger: GCATCCGGGAAGCTGAGTGCAAGAAGGAGATGCTGG...TGCCGAGGCCGAGGCCCACCGCATCCAGCAGATTGCCGAGGGTGAAAAGGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR GCA 90 bp ATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCTCTGGGCACGCAGGATCTCCTGTaGCTCCACGGCAATCTGTTT +
Preference number: 4 (lower is better)
Translates to: MSAGWGLGWMRGRTVSLGTQDLL*LHGNLF
Trigger: AAACAGATTGCCGTGGAGGCACAGGAGATCCTGCGT...GCCCAGAGACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp TCAATCTCAATCTCTTCCTGCCGGATCTTCTGCTGTTCACGGGCCCCCTGCAGCTCACCCTCGGCAATCTaGTGGATGCGGTGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: SISISSCRIFCCSRAPCSSPSAI*WMRWAS
Trigger: CGAGGCCCACCGCATCCAGCAGATTGCCGAGGGTGA...GCTGCAGGGGGCCCGTGAACAGCAGAAGATCCGGCAGGAAGAGATTGAGATTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR GCA 90 bp GGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAAGCATCGCCTCGATGACTaGCGCTTCCGCCTCCCCGAT +
Preference number: 4 (lower is better)
Translates to: GSATSKPQTRHAASTCRKHRLDD*RFRLPD
Trigger: ATCGGGGAGGCGGAAGCGGCAGTCATCGAGGCGATG...CTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp GATGGCACAAGGGCTCTGGGGTCTGGCCAGGCTACAGCACTCGATTCTGTACAGCATCCGCTCAGCCTCTaGCTTGCCCATCGCCTCGAT +
Preference number: 4 (lower is better)
Translates to: DGTRALGSGQATALDSVQHPLSL*LAHRLD
Trigger: ATCGAGGCGATGGGCAAGGCAGAGGCTGAGCGGATG...CTGTACAGAATCGAGTGCTGTAGCCTGGCCAGACCCCAGAGCCCTTGTGCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp GCCTCCATTGGAGCAAGGAGACAGAGGATTGGGTTGCTTCCCCATGGCTGGAACCCTGCAGGTCATGGCTaGCCAGACCTAGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: ASIGARRQRIGLLPHGWNPAGHG*PDLEGQ
Trigger: CTGCCCCTCTAGGTCTGGGCAGCCATGACCTGCAGG...GTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCTCCTTGCTCCAATGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp GCAGTGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGGAGGCCTTGCCTCTGTaGCCTTGGGGTCAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: AVGQCNIQAPDQTCSIHMEALPL*PWGQGE
Trigger: TTCTCCCTGACCCCAAGGGCACAGAGGCAAGGCCTC...CATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp AGACAGAGGATTGGGTTGCTTCCCCATGGCTGGAACCCCATCACTCTGGCCAGGGAGGCCTTGCCTCTGTaGCCTTGGGGTCAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: RQRIGLLPHGWNPITLAREALPL*PWGQGE
Trigger: TTCTCCCTGACCCCAAGGGCACAGAGGCAAGGCCTC...CCTGGCCAGAGTGATGGGGTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp GGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAGTAGACAGGAGGCCTTaGCTCTGTGCCCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: GAVQHPSPRPDMQHPHAGVDRRP*LCALGV
Trigger: GACCCCAAGGGCACAGAGGCAAGGCCTCCTGTCTAC...TCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp CAGGGTATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCTGACAGAGGATTGGGTTaGTTCCCCATGGCTGGAACC +
Preference number: 4 (lower is better)
Translates to: QGMSAGWGLGWMRGRTVSDRGLG*FPMAGT
Trigger: GGTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTC...AGACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp CGGCGCACTGTAGCGATGAGCTCCTTGTCCGTACGCAGGATCTCCTGTGCCTCCGACAGAGGATTGGGTTaGTTCCCCATGGCTGGAACC +
Preference number: 4 (lower is better)
Translates to: RRTVAMSSLSVRRISCASDRGLG*FPMAGT
Trigger: GGTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTC...GGAGGCACAGGAGATCCTGCGTACGGACAAGGAGCTCATCGCTACAGTGCGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580805.5
CDS-3UTR GCA 90 bp CTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTGGTCCTGGGCTCTTCTaGCTCCATTGGAGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: LDIHSTPAKTLGSWALLPGPGLF*LHWSKE
Trigger: CTCCTTGCTCCAATGGAGGCAGAAGAGCCCAGGACC...AGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp CCTCGGCCACGCCAATGTCAGCATCTCTCTGCACCACGGCAGTCTGCGTCTTGCGCCCCAGACCAGACATaGAGCATCCACATGCAGGAA +
Preference number: 4 (lower is better)
Translates to: PRPRQCQHLSAPRQSASCAPDQT*SIHMQE
Trigger: TTCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGC...GCAAGACGCAGACTGCCGTGGTGCAGAGAGATGCTGACATTGGCGTGGCCGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580805.5
CDS-3UTR CCA 90 bp ACGCAGCACTTCTGGTCCCTTCGAGATAAGGCACCAGAGTCAGTAACGTTCCCGCCACCAGCGCCTCGTTaGGCCCCACCGTGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: TQHFWSLRDKAPESVTFPPPAPR*APPCGN
Trigger: ATTGCCACACGGTGGGGCCCAACGAGGCGCTGGTGG...CGGGAACGTTACTGACTCTGGTGCCTTATCTCGAAGGGACCAGAAGTGCTGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp CCAGGGTGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTGTCATGATCTTCACCTaGGCGACACCCGTCACAGTT +
Preference number: 4 (lower is better)
Translates to: PGWGAGTTGHSQHPCQDAVMIFT*ATPVTV
Trigger: AACTGTGACGGGTGTCGCCCAGGTGAAGATCATGAC...AGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCACCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
CDS-3UTR CCA 90 bp GGGTGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCATGATCTTCACCTaGGCGACACCCGTCACAGTT +
Preference number: 4 (lower is better)
Translates to: GWGAGTTGHSQHPCQDAWVMIFT*ATPVTV
Trigger: AACTGTGACGGGTGTCGCCCAGGTGAAGATCATGAC...CCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
CDS-3UTR CCA 90 bp GAGGATGGACAGATGCACAGAGAACTTCAAGGCACCAGGATTCTGAGGAGCAGCCCCTCGGCAATCTGCTaGATGCGGTGGGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: EDGQMHRELQGTRILRSSPSAIC*MRWASA
Trigger: GGCCGAGGCCCACCGCATCCAGCAGATTGCCGAGGG...GCTGCTCCTCAGAATCCTGGTGCCTTGAAGTTCTCTGTGCATCTGTCCATCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp ACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAAGAGCTACACAGGAGGGAGGGCCGGGTaGCTGCTGAAGAGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: TSKPQTRHAASTCRKSYTGGRAG*LLKRVG
Trigger: GCCCACTCTCTTCAGCAGCCACCCGGCCCTCCCTCC...TGTGTAGCTCTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp CATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTCCATTACAGGGTATGAGCGCTaGCTGGGGCCTTGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: HSQHPCQDAWVLGSSASITGYER*LGPWVD
Trigger: ATCCACCCAAGGCCCCAGCCAGCGCTCATACCCTGT...AATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp GATGGCACAAGGGCTCTGGGGTCTGGCCAGGCTACAGCACTCGATTCTGTACAGAAGGGCTCTGGGGTCTaGCCAGGCTACAGCACTCGA +
Preference number: 4 (lower is better)
Translates to: DGTRALGSGQATALDSVQKGSGV*PGYSTR
Trigger: TCGAGTGCTGTAGCCTGGCCAGACCCCAGAGCCCTT...CTGTACAGAATCGAGTGCTGTAGCCTGGCCAGACCCCAGAGCCCTTGTGCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp AGACAGAGGATTGGGTTGCTTCCCCATGGCTGGAACCCCATCACTCTGGCCAGGATGGCACAAGGGCTCTaGGGTCTGGCCAGGCTACAG +
Preference number: 4 (lower is better)
Translates to: RQRIGLLPHGWNPITLARMAQGL*GLARLQ
Trigger: CTGTAGCCTGGCCAGACCCCAGAGCCCTTGTGCCAT...CCTGGCCAGAGTGATGGGGTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp GGGTGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGGAACCCCATCACTCTaGCCAGGAAGAAAGATGGCA +
Preference number: 4 (lower is better)
Translates to: GWGAGTTGHSQHPCQDAWGTPSL*PGRKMA
Trigger: TGCCATCTTTCTTCCTGGCCAGAGTGATGGGGTTCC...CCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp GTCCCGTTCAGCCTCGGCCACGCCAATGTCAGCATCTCTCTGCACCACGGCAGTTGGGTTGCTTCCCCATaGCTGGAACCCCATCACTCT +
Preference number: 4 (lower is better)
Translates to: VPFSLGHANVSISLHHGSWVASP*LEPHHS
Trigger: AGAGTGATGGGGTTCCAGCCATGGGGAAGCAACCCA...ACTGCCGTGGTGCAGAGAGATGCTGACATTGGCGTGGCCGAGGCTGAACGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580805.5
CDS-3UTR CCA 90 bp ATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCTCTGGGCAAGGAGACAGAGGATTaGGTTGCTTCCCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: MSAGWGLGWMRGRTVSLGKETED*VASPWL
Trigger: CAGCCATGGGGAAGCAACCCAATCCTCTGTCTCCTT...GCCCAGAGACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp TGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCAAGACGCTTGGGTCCTaGGCTCTTCTGCCTCCATTG +
Preference number: 4 (lower is better)
Translates to: WGAGTTGHSQHPCQDAWVKTLGS*ALLPPL
Trigger: CAATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTT...GACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR CAA 72 bp GACCACTGGACATTCACAGCACCCCTGCCAAGACGCTaGGGTCCTGGGCTCTTCTGCCTCCATTGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: DHWTFTAPLPRR*GPGLFCLHWSK
Trigger: CTTGCTCCAATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp ACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCCTCCTCACTGAAGGCTaGCTTTTGCAGCTCGAAGGC +
Preference number: 4 (lower is better)
Translates to: TGHSQHPCQDAWVLGSSALLTEG*LLQLEG
Trigger: GCCTTCGAGCTGCAAAAGTCAGCCTTCAGTGAGGAG...GGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp CGTCTTGCCCAGGGAGCTCAGATAGTCCACTTTGTCATACACGTCCTTGATGGTTGCCCATCGCCTCGATaGCTGCCGCTTCCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: RLAQGAQIVHFVIHVLDGCPSPR*LPLPPP
Trigger: GGGAGGCGGAAGCGGCAGTCATCGAGGCGATGGGCA...ACCATCAAGGACGTGTATGACAAAGTGGACTATCTGAGCTCCCTGGGCAAGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR TCA 90 bp GGTCTGGCCAGGCTACAGCACTCGATTCTGTACAGGGTTGGCACAGCCTTGTCCGGTAGGCTTCTGCCTTaGGCTTCATCCGCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: GLARLQHSILYRVGTALSGRLLP*ASSAQP
Trigger: AGGCTGAGCGGATGAAGCTCAAGGCAGAAGCCTACC...GGACAAGGCTGTGCCAACCCTGTACAGAATCGAGTGCTGTAGCCTGGCCAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp GATGGCACAAGGGCTCTGGGGTCTGGCCAGGCTACAGCACTCGATTCTGTACAGGGTAGGCTTCTGCCTTaGGCTTCATCCGCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: DGTRALGSGQATALDSVQGRLLP*ASSAQP
Trigger: AGGCTGAGCGGATGAAGCTCAAGGCAGAAGCCTACC...CTGTACAGAATCGAGTGCTGTAGCCTGGCCAGACCCCAGAGCCCTTGTGCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp AATCTCTTCCTGCCGGATCTTCTGCTGTTCACGGGCCCCCTGCAGCTCATAGGCCAGCCAGAGATGGCCTaGACACGCAGCACTTCTGGT +
Preference number: 4 (lower is better)
Translates to: NLFLPDLLLFTGPLQLIGQPEMA*TRSTSG
Trigger: ACCAGAAGTGCTGCGTGTTCAGGCCATCTCTGGCTG...GCCTATGAGCTGCAGGGGGCCCGTGAACAGCAGAAGATCCGGCAGGAAGAGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580805.5
CDS-3UTR TCA 90 bp AATCTCTTCCTGCCGGATCTTCTGCTGTTCACGGGCCCCCTGCAGCTCATAGGCCTGTCAGGGTCCCTCTaGGTGTCGGAGATACACCAC +
Preference number: 4 (lower is better)
Translates to: NLFLPDLLLFTGPLQLIGLSGSL*VSEIHH
Trigger: GTGGTGTATCTCCGACACTCAGAGGGACCCTGACAG...GCCTATGAGCTGCAGGGGGCCCGTGAACAGCAGAAGATCCGGCAGGAAGAGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586827.6
CDS-3UTR GCA 90 bp TGCAGCTCGAAGGCTCGCTTAGAGTCAGCAATCTTGGTGTCTGCCATGAACTTCCCACCGTGTGGCAATTaGCCATGGCGCCGGCGGCAC +
Preference number: 4 (lower is better)
Translates to: CSSKARLESAILVSAMNFPPCGN*PWRRRH
Trigger: GTGCCGCCGGCGCCATGGGCAATTGCCACACGGTGG...GAAGTTCATGGCAGACACCAAGATTGCTGACTCTAAGCGAGCCTTCGAGCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR GCA 90 bp ACGCAGCACTTCTGGTCCCTTCGAGATAAGGCACCAGAGTCAGTAACGTTCCCGGCCAACATCAGGGGCTaGCACCTCCCGCACCAGCTT +
Preference number: 4 (lower is better)
Translates to: TQHFWSLRDKAPESVTFPANIRG*HLPHQL
Trigger: AAGCTGGTGCGGGAGGTGGCAGCCCCTGATGTTGGC...CGGGAACGTTACTGACTCTGGTGCCTTATCTCGAAGGGACCAGAAGTGCTGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp CAACCTCAATCTCAATCTCTTCCTGCCGGATCTTCTGCTGTTCACGGGCCCCCTGCCAACATCAGGGGCTaGCACCTCCCGCACCAGCTT +
Preference number: 4 (lower is better)
Translates to: QPQSQSLPAGSSAVHGPPANIRG*HLPHQL
Trigger: AAGCTGGTGCGGGAGGTGGCAGCCCCTGATGTTGGC...AGGGGGCCCGTGAACAGCAGAAGATCCGGCAGGAAGAGATTGAGATTGAGGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR GCA 90 bp GGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAGGATCTCAATGCCCATaGGGCCAACATCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GAVQHPSPRPDMQHPHAGGSQCP*GQHQGL
Trigger: CAGCCCCTGATGTTGGCCGCATGGGCATTGAGATCC...TCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp ACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTCCATGGATCTCAATGCCCATaGGGCCAACATCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TFTAPLPRRLGPGLFCLHGSQCP*GQHQGL
Trigger: CAGCCCCTGATGTTGGCCGCATGGGCATTGAGATCC...ATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp TGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGGGATCTCAATGCCCATaGGGCCAACATCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: WGSATSKPQTRHAASTCRGSQCP*GQHQGL
Trigger: CAGCCCCTGATGTTGGCCGCATGGGCATTGAGATCC...CCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp CTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTATGTCAGCATCTCTCTaGACCACGGCAGTCTGCGTC +
Preference number: 4 (lower is better)
Translates to: LDIHSTPAKTLGSWALLPMSASL*TTAVCV
Trigger: GACGCAGACTGCCGTGGTGCAGAGAGATGCTGACAT...AGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp GTCATACACGTCCTTGATGGTGAAGCTGAGGATCTCAATGCCCATGCGGCCAACAGCTTCCCGGATGCCTaGGTCCCGTTCAGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: VIHVLDGEAEDLNAHAANSFPDA*VPFSLG
Trigger: GCCGAGGCTGAACGGGACGCAGGCATCCGGGAAGCT...GTTGGCCGCATGGGCATTGAGATCCTCAGCTTCACCATCAAGGACGTGTATGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR GCA 90 bp CTGGGCCCTGCAGGTCATGGCTGCCCAGACCTAGAGGGGCAGCAGCAGGTGAGGAGCAATCTTGGTGTCTaGCATGAACTTCACATCCAG +
Preference number: 4 (lower is better)
Translates to: LGPAGHGCPDLEGQQQVRSNLGV*HELHIQ
Trigger: CTGGATGTGAAGTTCATGGCAGACACCAAGATTGCT...CCTCACCTGCTGCTGCCCCTCTAGGTCTGGGCAGCCATGACCTGCAGGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp ATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCTCTGGGCCTGAAGGCTGACTTTTaGAGCTCGAAGGCTCGCTTA +
Preference number: 4 (lower is better)
Translates to: MSAGWGLGWMRGRTVSLGLKADF*SSKARL
Trigger: TAAGCGAGCCTTCGAGCTGCAAAAGTCAGCCTTCAG...GCCCAGAGACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp GATGGCACAAGGGCTCTGGGGTCTGGCCAGGCTACAGCACTCGATTCTGTACAGCTCAGCCTCTGCCTGTaGCAAGAGGACCTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: DGTRALGSGQATALDSVQLSLCL*QEDLLH
Trigger: GTGAAGCAGGTCCTCTTGGCACAGGCAGAGGCTGAG...CTGTACAGAATCGAGTGCTGTAGCCTGGCCAGACCCCAGAGCCCTTGTGCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp CACAACCTCAATCTCAATCTCTTCCTGCCGGATCTTCTGCTGTTCACGGGCCCCCATCGCCTCGATGACTaGCGCTTCCGCCTCCCCGAT +
Preference number: 4 (lower is better)
Translates to: HNLNLNLFLPDLLLFTGPHRLDD*RFRLPD
Trigger: ATCGGGGAGGCGGAAGCGGCAGTCATCGAGGCGATG...GGGGCCCGTGAACAGCAGAAGATCCGGCAGGAAGAGATTGAGATTGAGGTTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR GCA 90 bp GCCTCCATTGGAGCAAGGAGACAGAGGATTGGGTTGCTTCCCCATGGCTGGAACCATCCGCTCAGCCTCTaGCTTGCCCATCGCCTCGAT +
Preference number: 4 (lower is better)
Translates to: ASIGARRQRIGLLPHGWNHPLSL*LAHRLD
Trigger: ATCGAGGCGATGGGCAAGGCAGAGGCTGAGCGGATG...GTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCTCCTTGCTCCAATGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp GGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAAGCATCCGCTCAGCCTCTaGCTTGCCCATCGCCTCGAT +
Preference number: 4 (lower is better)
Translates to: GSATSKPQTRHAASTCRKHPLSL*LAHRLD
Trigger: ATCGAGGCGATGGGCAAGGCAGAGGCTGAGCGGATG...CTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp GGGTGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGCAAGGCCATCTTGGCTaGATCCCCGTATTTCTGGTA +
Preference number: 4 (lower is better)
Translates to: GWGAGTTGHSQHPCQDAWQGHLG*IPVFLV
Trigger: TACCAGAAATACGGGGATGCAGCCAAGATGGCCTTG...CCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp TGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGCAGGAGCCTCACACCTaGACACCAGTGGCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: WGSATSKPQTRHAASTCRQEPHT*TPVAFL
Trigger: CAAGAAGGCCACTGGTGTGCAGGTGTGAGGCTCCTG...CCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp CATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTCCATTCAGGAGCCTCACACCTaGACACCAGTGGCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: HSQHPCQDAWVLGSSASIQEPHT*TPVAFL
Trigger: CAAGAAGGCCACTGGTGTGCAGGTGTGAGGCTCCTG...AATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp AAACTTAGCAGAGTTGGGACCAAACCGCACCGCCCCAGCAGGAACATGCCCATGAGTGTCTCTGGGCCCTaGAGGTCATGGCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: KLSRVGTKPHRPSRNMPMSVSGP*RSWLPR
Trigger: TCTGGGCAGCCATGACCTGCAGGGCCCAGAGACACT...CATGGGCATGTTCCTGCTGGGGCGGTGCGGTTTGGTCCCAACTCTGCTAAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp TCTCAATCTCTTCCTGCCGGATCTTCTGCTGTTCACGGGCCCCCTGCAGCTCATGAGGCCTTGCCTCTGTaGCCTTGGGGTCAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: SQSLPAGSSAVHGPPAAHEALPL*PWGQGE
Trigger: TTCTCCCTGACCCCAAGGGCACAGAGGCAAGGCCTC...ATGAGCTGCAGGGGGCCCGTGAACAGCAGAAGATCCGGCAGGAAGAGATTGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580805.5
CDS-3UTR GCA 90 bp AAACTTAGCAGAGTTGGGACCAAACCGCACCGCCCCAGCAGGAACATGCCCATGGTAGACAGGAGGCCTTaGCTCTGTGCCCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: KLSRVGTKPHRPSRNMPMVDRRP*LCALGV
Trigger: GACCCCAAGGGCACAGAGGCAAGGCCTCCTGTCTAC...CATGGGCATGTTCCTGCTGGGGCGGTGCGGTTTGGTCCCAACTCTGCTAAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp GGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGACATTCACAGCACCCCTaGCAAGACGCTTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: GAVQHPSPRPDMQHPHAGHSQHP*QDAWVL
Trigger: CAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATG...TCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp ACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCATTTTGGCAGCAATCTaGGGCAGGGCCTCTAGCACC +
Preference number: 4 (lower is better)
Translates to: TGHSQHPCQDAWVLGSSAILAAI*GRASST
Trigger: GGTGCTAGAGGCCCTGCCCCAGATTGCTGCCAAAAT...GGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp CCTCGGCCACGCCAATGTCAGCATCTCTCTGCACCACGGCAGTCTGCGTCTTGCATCGACCTTGGTAAGTaGGGCAGCGATTTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: PRPRQCQHLSAPRQSASCIDLGK*GSDFGS
Trigger: GCTGCCAAAATCGCTGCCCCACTTACCAAGGTCGAT...GCAAGACGCAGACTGCCGTGGTGCAGAGAGATGCTGACATTGGCGTGGCCGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR CCA 90 bp GGGTGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGAACACGCAGCACTTCTaGTCCCTTCGAGATAAGGCA +
Preference number: 4 (lower is better)
Translates to: GWGAGTTGHSQHPCQDAWNTQHF*SLRDKA
Trigger: TGCCTTATCTCGAAGGGACCAGAAGTGCTGCGTGTT...CCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp AAACTTAGCAGAGTTGGGACCAAACCGCACCGCCCCAGCAGGAACATGCCCATGAAGGGCTCTGGGGTCTaGCCAGGCTACAGCACTCGA +
Preference number: 4 (lower is better)
Translates to: KLSRVGTKPHRPSRNMPMKGSGV*PGYSTR
Trigger: TCGAGTGCTGTAGCCTGGCCAGACCCCAGAGCCCTT...CATGGGCATGTTCCTGCTGGGGCGGTGCGGTTTGGTCCCAACTCTGCTAAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp AAACTTAGCAGAGTTGGGACCAAACCGCACCGCCCCAGCAGGAACATGCCCATGATGGCACAAGGGCTCTaGGGTCTGGCCAGGCTACAG +
Preference number: 4 (lower is better)
Translates to: KLSRVGTKPHRPSRNMPMMAQGL*GLARLQ
Trigger: CTGTAGCCTGGCCAGACCCCAGAGCCCTTGTGCCAT...CATGGGCATGTTCCTGCTGGGGCGGTGCGGTTTGGTCCCAACTCTGCTAAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp GCCTCCATTGGAGCAAGGAGACAGAGGATTGGGTTGCTTCCCCATGGCTGGAACATGGCACAAGGGCTCTaGGGTCTGGCCAGGCTACAG +
Preference number: 4 (lower is better)
Translates to: ASIGARRQRIGLLPHGWNMAQGL*GLARLQ
Trigger: CTGTAGCCTGGCCAGACCCCAGAGCCCTTGTGCCAT...GTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCTCCTTGCTCCAATGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp TCTGGGGCAGGGCCTCTAGCACCAAGGCCATCTTGGCTGCATCCCCGTATTTCTGGCCAGGAAGAAAGATaGCACAAGGGCTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: SGAGPLAPRPSWLHPRISGQEER*HKGSGV
Trigger: GACCCCAGAGCCCTTGTGCCATCTTTCTTCCTGGCC...AGAAATACGGGGATGCAGCCAAGATGGCCTTGGTGCTAGAGGCCCTGCCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580805.5
CDS-3UTR CCA 90 bp CAGTGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCTTGCTTCCCCATGGCTaGAACCCCATCACTCTGGCC +
Preference number: 4 (lower is better)
Translates to: QWGSATSKPQTRHAASTCLLPHG*NPITLA
Trigger: GGCCAGAGTGATGGGGTTCCAGCCATGGGGAAGCAA...GCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp CTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTTGGGTTGCTTCCCCATaGCTGGAACCCCATCACTCT +
Preference number: 4 (lower is better)
Translates to: LDIHSTPAKTLGSWALLPWVASP*LEPHHS
Trigger: AGAGTGATGGGGTTCCAGCCATGGGGAAGCAACCCA...AGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp ACGCAGCACTTCTGGTCCCTTCGAGATAAGGCACCAGAGTCAGTAACGTTCCCGCCCTGCCAAGACGCTTaGGTCCTGGGCTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: TQHFWSLRDKAPESVTFPPCQDA*VLGSSA
Trigger: GGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGG...CGGGAACGTTACTGACTCTGGTGCCTTATCTCGAAGGGACCAGAAGTGCTGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp AGGAGACAGAGGATTGGGTTGCTTCCCCATGGCTGGAACCCCATCACTCTGGCCGTTCCTTCTCCGTCATaGTCTTCACCTGGGCGACAC +
Preference number: 4 (lower is better)
Translates to: RRQRIGLLPHGWNPITLAVPSPS*SSPGRH
Trigger: GTGTCGCCCAGGTGAAGATCATGACGGAGAAGGAAC...GGCCAGAGTGATGGGGTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
CDS-3UTR TCA 90 bp ATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCTCTGGGCGCAGGACGACGTTTTTaGTGTCCTGCACATTCTTAC +
Preference number: 4 (lower is better)
Translates to: MSAGWGLGWMRGRTVSLGAGRRF*CPAHSY
Trigger: GTAAGAATGTGCAGGACATCAAAAACGTCGTCCTGC...GCCCAGAGACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp CAGTGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCCTCCTCACTGAAGGCTaGCTTTTGCAGCTCGAAGGC +
Preference number: 4 (lower is better)
Translates to: QWGSATSKPQTRHAASTCLLTEG*LLQLEG
Trigger: GCCTTCGAGCTGCAAAAGTCAGCCTTCAGTGAGGAG...GCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp AAACTTAGCAGAGTTGGGACCAAACCGCACCGCCCCAGCAGGAACATGCCCATGGGTAGGCTTCTGCCTTaGGCTTCATCCGCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: KLSRVGTKPHRPSRNMPMGRLLP*ASSAQP
Trigger: AGGCTGAGCGGATGAAGCTCAAGGCAGAAGCCTACC...CATGGGCATGTTCCTGCTGGGGCGGTGCGGTTTGGTCCCAACTCTGCTAAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp GGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCGGTTCACTTCTGATGTaGCCTTACTGTTGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: GELGPLDIHSTPAKTLGSGSLLM*PYCCLH
Trigger: GTGGAGACAACAGTAAGGTCACATCAGAAGTGAACC...GGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp GATGTGACCTTACTGTTGTCTCCACTGAGGACCACAATCTCATCGACCTTGGTAGGGCCGGGTGGCTGCTaGAGAGAGTGGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: DVTLLLSPLRTTISSTLVGPGGC*REWACR
Trigger: CCTGCAGGCCCACTCTCTTCAGCAGCCACCCGGCCC...TACCAAGGTCGATGAGATTGTGGTCCTCAGTGGAGACAACAGTAAGGTCACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580805.5
CDS-3UTR TCA 90 bp CCAGGGTGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTAGACACGCAGGGAGATaGGACACAAACCTGATGAAA +
Preference number: 4 (lower is better)
Translates to: PGWGAGTTGHSQHPCQDARHAGR*DTNLMK
Trigger: TTTCATCAGGTTTGTGTCTCATCTCCCTGCGTGTCT...AGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCACCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp CTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTTTCTTACCCAGAAACTaGTCACAAGCCACGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LDIHSTPAKTLGSWALLPFLPRN*SQATAR
Trigger: CCTGGCCGTGGCTTGTGAGCAGTTTCTGGGTAAGAA...AGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp CAGTGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCATGTCAGCATCTCTCTaGACCACGGCAGTCTGCGTC +
Preference number: 4 (lower is better)
Translates to: QWGSATSKPQTRHAASTCMSASL*TTAVCV
Trigger: GACGCAGACTGCCGTGGTGCAGAGAGATGCTGACAT...GCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp ACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTCCATATGTCAGCATCTCTCTaGACCACGGCAGTCTGCGTC +
Preference number: 4 (lower is better)
Translates to: TFTAPLPRRLGPGLFCLHMSASL*TTAVCV
Trigger: GACGCAGACTGCCGTGGTGCAGAGAGATGCTGACAT...ATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp TGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGCCAGCATCTCCTTCTTaGACTCAGCTTCCCGGATGC +
Preference number: 4 (lower is better)
Translates to: WGSATSKPQTRHAASTCRPASPS*TQLPGC
Trigger: GCATCCGGGAAGCTGAGTGCAAGAAGGAGATGCTGG...CCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp ACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAAGAGCTACACACATCGCCTCGATGACTaGCGCTTCCGCCTCCCCGAT +
Preference number: 4 (lower is better)
Translates to: TSKPQTRHAASTCRKSYTHRLDD*RFRLPD
Trigger: ATCGGGGAGGCGGAAGCGGCAGTCATCGAGGCGATG...TGTGTAGCTCTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp CGGCAGTCTGCGTCTTGCCCAGGGAGCTCAGATAGTCCACTTTGTCATACACGTCATCCGCTCAGCCTCTaGCTTGCCCATCGCCTCGAT +
Preference number: 4 (lower is better)
Translates to: RQSASCPGSSDSPLCHTRHPLSL*LAHRLD
Trigger: ATCGAGGCGATGGGCAAGGCAGAGGCTGAGCGGATG...ACGTGTATGACAAAGTGGACTATCTGAGCTCCCTGGGCAAGACGCAGACTGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR GCA 90 bp GCAGTGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAACACCCAGGACAGTaGAGCCCTAGCAGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: AVGQCNIQAPDQTCSIHMQHPGQ*SPSRKK
Trigger: CTTCTTCCTGCTAGGGCTGCACTGTCCTGGGTGTTG...CATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp CGCTTAGAGTCAGCAATCTTGGTGTCTGCCATGAACTTCACATCCAGCATCTCCTGTGGCAATTGCCCATaGCGCCGGCGGCACGGAGGG +
Preference number: 4 (lower is better)
Translates to: RLESAILVSAMNFTSSISCGNCP*RRRHGG
Trigger: CCCTCCGTGCCGCCGGCGCCATGGGCAATTGCCACA...GGAGATGCTGGATGTGAAGTTCATGGCAGACACCAAGATTGCTGACTCTAAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580805.5
CDS-3UTR CCA 90 bp ACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCATCGACCTTGGTAAGTaGGGCAGCGATTTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: TGHSQHPCQDAWVLGSSAIDLGK*GSDFGS
Trigger: GCTGCCAAAATCGCTGCCCCACTTACCAAGGTCGAT...GGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp CAACCTCAATCTCAATCTCTTCCTGCCGGATCTTCTGCTGTTCACGGGCCCCCTACAGGGTATGAGCGCTaGCTGGGGCCTTGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: QPQSQSLPAGSSAVHGPPTGYER*LGPWVD
Trigger: ATCCACCCAAGGCCCCAGCCAGCGCTCATACCCTGT...AGGGGGCCCGTGAACAGCAGAAGATCCGGCAGGAAGAGATTGAGATTGAGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580805.5
CDS-3UTR CCA 90 bp GGTCTGGCCAGGCTACAGCACTCGATTCTGTACAGGGTTGGCACAGCCTTGTCCAAGACGCTTGGGTCCTaGGCTCTTCTGCCTCCATTG +
Preference number: 4 (lower is better)
Translates to: GLARLQHSILYRVGTALSKTLGS*ALLPPL
Trigger: CAATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTT...GGACAAGGCTGTGCCAACCCTGTACAGAATCGAGTGCTGTAGCCTGGCCAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp AGGGAGGATGGACAGATGCACAGAGAACTTCAAGGCACCAGGATTCTGAGGAGCCCCTGCCAAGACGCTTaGGTCCTGGGCTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: REDGQMHRELQGTRILRSPCQDA*VLGSSA
Trigger: GGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGG...GCTCCTCAGAATCCTGGTGCCTTGAAGTTCTCTGTGCATCTGTCCATCCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp ACGCAGCACTTCTGGTCCCTTCGAGATAAGGCACCAGAGTCAGTAACGTTCCCGGGGAGCTGGGACCACTaGACATTCACAGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: TQHFWSLRDKAPESVTFPGSWDH*TFTAPL
Trigger: CAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCC...CGGGAACGTTACTGACTCTGGTGCCTTATCTCGAAGGGACCAGAAGTGCTGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp ACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTCCATAGAAGGGACAGGCAGTaGGGCAGTGCAACATCCAAG +
Preference number: 4 (lower is better)
Translates to: TFTAPLPRRLGPGLFCLHRRDRQ*GSATSK
Trigger: CTTGGATGTTGCACTGCCCCACTGCCTGTCCCTTCT...ATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp CATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTCCATTAGAAGGGACAGGCAGTaGGGCAGTGCAACATCCAAG +
Preference number: 4 (lower is better)
Translates to: HSQHPCQDAWVLGSSASIRRDRQ*GSATSK
Trigger: CTTGGATGTTGCACTGCCCCACTGCCTGTCCCTTCT...AATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR CAA 72 bp CTACAGCACTCGATTCTGTACAGGGTTGGCACAGCCTaGTCCACCAGAAGGGCCCAACACCCAGGACAGTGC +
Preference number: 4 (lower is better)
Translates to: LQHSILYRVGTA*STRRAQHPGQC
Trigger: GCACTGTCCTGGGTGTTGGGCCCTTCTGGTGGACAAGGCTGTGCCAACCCTGTACAGAATCGAGTGCTGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR CAA 72 bp TCTGCCTCCATTGGAGCAAGGAGACAGAGGATTGGGTaGCTTCCCCATGGCTGGAACCCCATCACTCTGGCC +
Preference number: 4 (lower is better)
Translates to: SASIGARRQRIG*LPHGWNPITLA
Trigger: GGCCAGAGTGATGGGGTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCTCCTTGCTCCAATGGAGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp AGACAGAGGATTGGGTTGCTTCCCCATGGCTGGAACCCCATCACTCTGGCCAGGTCCAGAGACAGTCTCTaGGTGTCGGAGATACACCAC +
Preference number: 4 (lower is better)
Translates to: RQRIGLLPHGWNPITLARSRDSL*VSEIHH
Trigger: GTGGTGTATCTCCGACACTCAGAGACTGTCTCTGGA...CCTGGCCAGAGTGATGGGGTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394906.6
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp ACAGGGTATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCGCAGGACGACGTTTTTaGTGTCCTGCACATTCTTAC +
Preference number: 4 (lower is better)
Translates to: TGYERWLGPWVDEGKDSVAGRRF*CPAHSY
Trigger: GTAAGAATGTGCAGGACATCAAAAACGTCGTCCTGC...GACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp CAGGGTATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCTTCTTGGTGTCTGCCATaGACTTCACATCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: QGMSAGWGLGWMRGRTVSSWCLP*TSHPAS
Trigger: AGATGCTGGATGTGAAGTTCATGGCAGACACCAAGA...AGACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp ACAGGGTATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCTCTTGGTGTCTGCCATaGACTTCACATCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: TGYERWLGPWVDEGKDSVSWCLP*TSHPAS
Trigger: AGATGCTGGATGTGAAGTTCATGGCAGACACCAAGA...GACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp ACAGGGTATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCGGTTCACTTCTGATGTaGCCTTACTGTTGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: TGYERWLGPWVDEGKDSVGSLLM*PYCCLH
Trigger: GTGGAGACAACAGTAAGGTCACATCAGAAGTGAACC...GACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp ACAGGGTATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCCAGTCGGTTCACTTCTaGTGTGACCTTACTGTTGTC +
Preference number: 4 (lower is better)
Translates to: TGYERWLGPWVDEGKDSVQSVHF*CDLTVV
Trigger: GACAACAGTAAGGTCACATCAGAAGTGAACCGACTG...GACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp ATGGAGCGCAGATGTCCCTCCAGGGTCTGCAGGACGACGTTTTTGATGTCCTGCTCCTCGCAGCGGGGCTaGAACGTCATAATCTCTAGG +
Preference number: 4 (lower is better)
Translates to: MERRCPSRVCRTTFLMSCSSQRG*NVIISR
Trigger: CCTAGAGATTATGACGTTGCAGCCCCGCTGCGAGGA...GCAGGACATCAAAAACGTCGTCCTGCAGACCCTGGAGGGACATCTGCGCTCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580805.5
CDS-3UTR GCA 90 bp GGTCTGGCCAGGCTACAGCACTCGATTCTGTACAGGGTTGGCACAGCCTTGTCCTTCTTACCCAGAAACTaGTCACAAGCCACGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GLARLQHSILYRVGTALSFLPRN*SQATAR
Trigger: CCTGGCCGTGGCTTGTGAGCAGTTTCTGGGTAAGAA...GGACAAGGCTGTGCCAACCCTGTACAGAATCGAGTGCTGTAGCCTGGCCAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp GGCCCCCTGCAGCTCATAGGCCAACTGGGCCTCAGCTGTCTTGATGTTAACCTCTTCTTACCCAGAAACTaGTCACAAGCCACGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GPLQLIGQLGLSCLDVNLFLPRN*SQATAR
Trigger: CCTGGCCGTGGCTTGTGAGCAGTTTCTGGGTAAGAA...GAGGTTAACATCAAGACAGCTGAGGCCCAGTTGGCCTATGAGCTGCAGGGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580805.5
CDS-3UTR GCA 90 bp CGTCTTGCCCAGGGAGCTCAGATAGTCCACTTTGTCATACACGTCCTTGATGGTTGCACCACGGCAGTCTaGGTCTTGCCCAGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: RLAQGAQIVHFVIHVLDGCTTAV*VLPREL
Trigger: GAGCTCCCTGGGCAAGACGCAGACTGCCGTGGTGCA...ACCATCAAGGACGTGTATGACAAAGTGGACTATCTGAGCTCCCTGGGCAAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR GCA 90 bp GGGCCTCTAGCACCAAGGCCATCTTGGCTGCATCCCCGTATTTCTGGTAGGCTTCCAGCATCTCCTTCTTaGACTCAGCTTCCCGGATGC +
Preference number: 4 (lower is better)
Translates to: GPLAPRPSWLHPRISGRLPASPS*TQLPGC
Trigger: GCATCCGGGAAGCTGAGTGCAAGAAGGAGATGCTGG...AAGCCTACCAGAAATACGGGGATGCAGCCAAGATGGCCTTGGTGCTAGAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR GCA 90 bp CCAGGGTGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTAGCAATCTTGGTGTCTaGCATGAACTTCACATCCAG +
Preference number: 4 (lower is better)
Translates to: PGWGAGTTGHSQHPCQDASNLGV*HELHIQ
Trigger: CTGGATGTGAAGTTCATGGCAGACACCAAGATTGCT...AGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCACCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp CCAGGGTGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTATCTCAATCTCTTCCTaGCGGATCTTCTGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: PGWGAGTTGHSQHPCQDAISISS*RIFCCS
Trigger: TGAACAGCAGAAGATCCGGCAGGAAGAGATTGAGAT...AGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCACCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp CAGTGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCTGTGCCAAGAGGACCTaGTTCACCTTTTCACCCTCG +
Preference number: 4 (lower is better)
Translates to: QWGSATSKPQTRHAASTCCAKRT*FTFSPS
Trigger: CGAGGGTGAAAAGGTGAAGCAGGTCCTCTTGGCACA...GCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp CTAGACCCTCATCTCAGAAAACTTAGCAGAGTTGGGACCAAACCGCACCGCCCCCCGCCTCCCCGATTTTaGGGATCTTCTCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LDPHLRKLSRVGTKPHRPPPPRF*GSSQPL
Trigger: CAGAGGCTGAGAAGATCCGCAAAATCGGGGAGGCGG...GGGGCGGTGCGGTTTGGTCCCAACTCTGCTAAGTTTTCTGAGATGAGGGTCTAG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp CGGCAGTCTGCGTCTTGCCCAGGGAGCTCAGATAGTCCACTTTGTCATACACGTCAGGAGCCTCACACCTaGACACCAGTGGCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: RQSASCPGSSDSPLCHTRQEPHT*TPVAFL
Trigger: CAAGAAGGCCACTGGTGTGCAGGTGTGAGGCTCCTG...ACGTGTATGACAAAGTGGACTATCTGAGCTCCCTGGGCAAGACGCAGACTGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580805.5
CDS-3UTR GCA 90 bp GAGGATGGACAGATGCACAGAGAACTTCAAGGCACCAGGATTCTGAGGAGCAGCAGTGTCTCTGGGCCCTaGAGGTCATGGCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: EDGQMHRELQGTRILRSSSVSGP*RSWLPR
Trigger: TCTGGGCAGCCATGACCTGCAGGGCCCAGAGACACT...GCTGCTCCTCAGAATCCTGGTGCCTTGAAGTTCTCTGTGCATCTGTCCATCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp ACGCAGCACTTCTGGTCCCTTCGAGATAAGGCACCAGAGTCAGTAACGTTCCCGCATTCACAGCACCCCTaGCAAGACGCTTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: TQHFWSLRDKAPESVTFPHSQHP*QDAWVL
Trigger: CAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATG...CGGGAACGTTACTGACTCTGGTGCCTTATCTCGAAGGGACCAGAAGTGCTGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp AGACAGAGGATTGGGTTGCTTCCCCATGGCTGGAACCCCATCACTCTGGCCAGGCATGCAGCATCCACATaGAGGAAGAGCTACACAGGC +
Preference number: 4 (lower is better)
Translates to: RQRIGLLPHGWNPITLARHAAST*RKSYTG
Trigger: GCCTGTGTAGCTCTTCCTGCATGTGGATGCTGCATG...CCTGGCCAGAGTGATGGGGTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp TCTGGGGCAGGGCCTCTAGCACCAAGGCCATCTTGGCTGCATCCCCGTATTTCTCATGCAGCATCCACATaGAGGAAGAGCTACACAGGC +
Preference number: 4 (lower is better)
Translates to: SGAGPLAPRPSWLHPRISHAAST*RKSYTG
Trigger: GCCTGTGTAGCTCTTCCTGCATGTGGATGCTGCATG...AGAAATACGGGGATGCAGCCAAGATGGCCTTGGTGCTAGAGGCCCTGCCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580805.5
CDS-3UTR CCA 90 bp GAAGGCTCGCTTAGAGTCAGCAATCTTGGTGTCTGCCATGAACTTCACATCCAGCCACCAGCGCCTCGTTaGGCCCCACCGTGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: EGSLRVSNLGVCHELHIQPPAPR*APPCGN
Trigger: ATTGCCACACGGTGGGGCCCAACGAGGCGCTGGTGG...CTGGATGTGAAGTTCATGGCAGACACCAAGATTGCTGACTCTAAGCGAGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR CCA 90 bp TGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAAGAGCTATCAGGGTCCCGAGGATaGAGCGCAGATGTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: CNIQAPDQTCSIHMQEELSGSRG*SADVPP
Trigger: TGGAGGGACATCTGCGCTCCATCCTCGGGACCCTGA...TAGCTCTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp GATGGCACAAGGGCTCTGGGGTCTGGCCAGGCTACAGCACTCGATTCTGTACAGATCGACCTTGGTAAGTaGGGCAGCGATTTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: DGTRALGSGQATALDSVQIDLGK*GSDFGS
Trigger: GCTGCCAAAATCGCTGCCCCACTTACCAAGGTCGAT...CTGTACAGAATCGAGTGCTGTAGCCTGGCCAGACCCCAGAGCCCTTGTGCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp AGGGAGGATGGACAGATGCACAGAGAACTTCAAGGCACCAGGATTCTGAGGAGCACAGGGTATGAGCGCTaGCTGGGGCCTTGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: REDGQMHRELQGTRILRSTGYER*LGPWVD
Trigger: ATCCACCCAAGGCCCCAGCCAGCGCTCATACCCTGT...GCTCCTCAGAATCCTGGTGCCTTGAAGTTCTCTGTGCATCTGTCCATCCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp CTGCACAACCTCAATCTCAATCTCTTCCTGCCGGATCTTCTGCTGTTCACGGGCATGGCACAAGGGCTCTaGGGTCTGGCCAGGCTACAG +
Preference number: 4 (lower is better)
Translates to: LHNLNLNLFLPDLLLFTGMAQGL*GLARLQ
Trigger: CTGTAGCCTGGCCAGACCCCAGAGCCCTTGTGCCAT...GCCCGTGAACAGCAGAAGATCCGGCAGGAAGAGATTGAGATTGAGGTTGTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580805.5
CDS-3UTR CCA 90 bp CTAGACCCTCATCTCAGAAAACTTAGCAGAGTTGGGACCAAACCGCACCGCCCCGGCCAGGAAGAAAGATaGCACAAGGGCTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: LDPHLRKLSRVGTKPHRPGQEER*HKGSGV
Trigger: GACCCCAGAGCCCTTGTGCCATCTTTCTTCCTGGCC...GGGGCGGTGCGGTTTGGTCCCAACTCTGCTAAGTTTTCTGAGATGAGGGTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp CTAGACCCTCATCTCAGAAAACTTAGCAGAGTTGGGACCAAACCGCACCGCCCCTTGCTTCCCCATGGCTaGAACCCCATCACTCTGGCC +
Preference number: 4 (lower is better)
Translates to: LDPHLRKLSRVGTKPHRPLLPHG*NPITLA
Trigger: GGCCAGAGTGATGGGGTTCCAGCCATGGGGAAGCAA...GGGGCGGTGCGGTTTGGTCCCAACTCTGCTAAGTTTTCTGAGATGAGGGTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp GCCTCCATTGGAGCAAGGAGACAGAGGATTGGGTTGCTTCCCCATGGCTGGAACTGGGTTGCTTCCCCATaGCTGGAACCCCATCACTCT +
Preference number: 4 (lower is better)
Translates to: ASIGARRQRIGLLPHGWNWVASP*LEPHHS
Trigger: AGAGTGATGGGGTTCCAGCCATGGGGAAGCAACCCA...GTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCTCCTTGCTCCAATGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp GGTCTGGCCAGGCTACAGCACTCGATTCTGTACAGGGTTGGCACAGCCTTGTCCAAGGAGACAGAGGATTaGGTTGCTTCCCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: GLARLQHSILYRVGTALSKETED*VASPWL
Trigger: CAGCCATGGGGAAGCAACCCAATCCTCTGTCTCCTT...GGACAAGGCTGTGCCAACCCTGTACAGAATCGAGTGCTGTAGCCTGGCCAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp ACGCAGCACTTCTGGTCCCTTCGAGATAAGGCACCAGAGTCAGTAACGTTCCCGGTTCCTTCTCCGTCATaGTCTTCACCTGGGCGACAC +
Preference number: 4 (lower is better)
Translates to: TQHFWSLRDKAPESVTFPVPSPS*SSPGRH
Trigger: GTGTCGCCCAGGTGAAGATCATGACGGAGAAGGAAC...CGGGAACGTTACTGACTCTGGTGCCTTATCTCGAAGGGACCAGAAGTGCTGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
CDS-3UTR TCA 90 bp CCACTGAGGACCACAATCTCATCGACCTTGGTAAGTGGGGCAGCGATTTTGGCAGGTAGGCTTCTGCCTTaGGCTTCATCCGCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: PLRTTISSTLVSGAAILAGRLLP*ASSAQP
Trigger: AGGCTGAGCGGATGAAGCTCAAGGCAGAAGCCTACC...TGCCAAAATCGCTGCCCCACTTACCAAGGTCGATGAGATTGTGGTCCTCAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR TCA 90 bp TGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAAGAGCTACAGCCAGAGATGGCCTaGACACGCAGCACTTCTGGT +
Preference number: 4 (lower is better)
Translates to: CNIQAPDQTCSIHMQEELQPEMA*TRSTSG
Trigger: ACCAGAAGTGCTGCGTGTTCAGGCCATCTCTGGCTG...TAGCTCTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp AAACTTAGCAGAGTTGGGACCAAACCGCACCGCCCCAGCAGGAACATGCCCATGTGCTGTTTCCCCACTTaGAGTCCAATAGGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: KLSRVGTKPHRPSRNMPMCCFPT*SPIGKG
Trigger: GCCCTTGCCTATTGGACTGCAAGTGGGGAAACAGCA...CATGGGCATGTTCCTGCTGGGGCGGTGCGGTTTGGTCCCAACTCTGCTAAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394906.6
CDS-3UTR GCA 90 bp GATGGCACAAGGGCTCTGGGGTCTGGCCAGGCTACAGCACTCGATTCTGTACAGCTGAAGGCTGACTTTTaGAGCTCGAAGGCTCGCTTA +
Preference number: 4 (lower is better)
Translates to: DGTRALGSGQATALDSVQLKADF*SSKARL
Trigger: TAAGCGAGCCTTCGAGCTGCAAAAGTCAGCCTTCAG...CTGTACAGAATCGAGTGCTGTAGCCTGGCCAGACCCCAGAGCCCTTGTGCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp CATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTCCATTCTGAAGGCTGACTTTTaGAGCTCGAAGGCTCGCTTA +
Preference number: 4 (lower is better)
Translates to: HSQHPCQDAWVLGSSASILKADF*SSKARL
Trigger: TAAGCGAGCCTTCGAGCTGCAAAAGTCAGCCTTCAG...AATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp AATCTCTTCCTGCCGGATCTTCTGCTGTTCACGGGCCCCCTGCAGCTCATAGGCCTGAAGGCTGACTTTTaGAGCTCGAAGGCTCGCTTA +
Preference number: 4 (lower is better)
Translates to: NLFLPDLLLFTGPLQLIGLKADF*SSKARL
Trigger: TAAGCGAGCCTTCGAGCTGCAAAAGTCAGCCTTCAG...GCCTATGAGCTGCAGGGGGCCCGTGAACAGCAGAAGATCCGGCAGGAAGAGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR GCA 90 bp GGGTGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGATCTGTTTCTTGCGCTaGACAACCTCAATCTCAATC +
Preference number: 4 (lower is better)
Translates to: GWGAGTTGHSQHPCQDAWICFLR*TTSISI
Trigger: GATTGAGATTGAGGTTGTGCAGCGCAAGAAACAGAT...CCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp GGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAAGACGCAGGATCTCCTGTaGCTCCACGGCAATCTGTTT +
Preference number: 4 (lower is better)
Translates to: GSATSKPQTRHAASTCRKTQDLL*LHGNLF
Trigger: AAACAGATTGCCGTGGAGGCACAGGAGATCCTGCGT...CTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp AAGGCTGACTTTTGCAGCTCGAAGGCTCGCTTAGAGTCAGCAATCTTGGTGTCTTCACCCTCGGCAATCTaGTGGATGCGGTGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: KADFCSSKARLESAILVSSPSAI*WMRWAS
Trigger: CGAGGCCCACCGCATCCAGCAGATTGCCGAGGGTGA...AGACACCAAGATTGCTGACTCTAAGCGAGCCTTCGAGCTGCAAAAGTCAGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR GCA 90 bp AAACTTAGCAGAGTTGGGACCAAACCGCACCGCCCCAGCAGGAACATGCCCATGTGTGCCAAGAGGACCTaGTTCACCTTTTCACCCTCG +
Preference number: 4 (lower is better)
Translates to: KLSRVGTKPHRPSRNMPMCAKRT*FTFSPS
Trigger: CGAGGGTGAAAAGGTGAAGCAGGTCCTCTTGGCACA...CATGGGCATGTTCCTGCTGGGGCGGTGCGGTTTGGTCCCAACTCTGCTAAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp GAGGATGGACAGATGCACAGAGAACTTCAAGGCACCAGGATTCTGAGGAGCAGCCCGCCTCCCCGATTTTaGGGATCTTCTCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: EDGQMHRELQGTRILRSSPPPRF*GSSQPL
Trigger: CAGAGGCTGAGAAGATCCGCAAAATCGGGGAGGCGG...GCTGCTCCTCAGAATCCTGGTGCCTTGAAGTTCTCTGTGCATCTGTCCATCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp ACACGCAGGGAGATGAGACACAAACCTGATGAAAGTGGCAGTGAAAGTGGGGTACATCGCCTCGATGACTaGCGCTTCCGCCTCCCCGAT +
Preference number: 4 (lower is better)
Translates to: TRREMRHKPDESGSESGVHRLDD*RFRLPD
Trigger: ATCGGGGAGGCGGAAGCGGCAGTCATCGAGGCGATG...TACCCCACTTTCACTGCCACTTTCATCAGGTTTGTGTCTCATCTCCCTGCGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp GGTCTGGCCAGGCTACAGCACTCGATTCTGTACAGGGTTGGCACAGCCTTGTCCTTTCTGGTAGGCTTCTaGCTTGAGCTTCATCCGCTC +
Preference number: 4 (lower is better)
Translates to: GLARLQHSILYRVGTALSFLVGF*LELHPL
Trigger: GAGCGGATGAAGCTCAAGGCAGAAGCCTACCAGAAA...GGACAAGGCTGTGCCAACCCTGTACAGAATCGAGTGCTGTAGCCTGGCCAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp GGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGATTTCTGGTAGGCTTCTaGCTTGAGCTTCATCCGCTC +
Preference number: 4 (lower is better)
Translates to: GAVQHPSPRPDMQHPHAGFLVGF*LELHPL
Trigger: GAGCGGATGAAGCTCAAGGCAGAAGCCTACCAGAAA...TCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp TGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGCAAGGCCATCTTGGCTaGATCCCCGTATTTCTGGTA +
Preference number: 4 (lower is better)
Translates to: WGSATSKPQTRHAASTCRQGHLG*IPVFLV
Trigger: TACCAGAAATACGGGGATGCAGCCAAGATGGCCTTG...CCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp AGGGAGGATGGACAGATGCACAGAGAACTTCAAGGCACCAGGATTCTGAGGAGCGGTCCTGGGCTCTTCTaGCTCCATTGGAGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: REDGQMHRELQGTRILRSGPGLF*LHWSKE
Trigger: CTCCTTGCTCCAATGGAGGCAGAAGAGCCCAGGACC...GCTCCTCAGAATCCTGGTGCCTTGAAGTTCTCTGTGCATCTGTCCATCCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp GGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAAGCATGCAGCATCCACATaGAGGAAGAGCTACACAGGC +
Preference number: 4 (lower is better)
Translates to: GSATSKPQTRHAASTCRKHAAST*RKSYTG
Trigger: GCCTGTGTAGCTCTTCCTGCATGTGGATGCTGCATG...CTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp GGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAAGGGAACCCCATCACTCTaGCCAGGAAGAAAGATGGCA +
Preference number: 4 (lower is better)
Translates to: GSATSKPQTRHAASTCRKGTPSL*PGRKMA
Trigger: TGCCATCTTTCTTCCTGGCCAGAGTGATGGGGTTCC...CTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp ATGAGCTCCTTGTCCGTACGCAGGATCTCCTGTGCCTCCACGGCAATCTGTTTCAAGACGCTTGGGTCCTaGGCTCTTCTGCCTCCATTG +
Preference number: 4 (lower is better)
Translates to: MSSLSVRRISCASTAICFKTLGS*ALLPPL
Trigger: CAATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTT...GAAACAGATTGCCGTGGAGGCACAGGAGATCCTGCGTACGGACAAGGAGCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580805.5
CDS-3UTR TCA 90 bp TGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGGCAGGACGACGTTTTTaGTGTCCTGCACATTCTTAC +
Preference number: 4 (lower is better)
Translates to: WGSATSKPQTRHAASTCRAGRRF*CPAHSY
Trigger: GTAAGAATGTGCAGGACATCAAAAACGTCGTCCTGC...CCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp TCTGGGGCAGGGCCTCTAGCACCAAGGCCATCTTGGCTGCATCCCCGTATTTCTTCTTGGTGTCTGCCATaGACTTCACATCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: SGAGPLAPRPSWLHPRISSWCLP*TSHPAS
Trigger: AGATGCTGGATGTGAAGTTCATGGCAGACACCAAGA...AGAAATACGGGGATGCAGCCAAGATGGCCTTGGTGCTAGAGGCCCTGCCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR TCA 90 bp AGACAGAGGATTGGGTTGCTTCCCCATGGCTGGAACCCCATCACTCTGGCCAGGTCTTGGTGTCTGCCATaGACTTCACATCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: RQRIGLLPHGWNPITLARSWCLP*TSHPAS
Trigger: AGATGCTGGATGTGAAGTTCATGGCAGACACCAAGA...CCTGGCCAGAGTGATGGGGTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp GTCATACACGTCCTTGATGGTGAAGCTGAGGATCTCAATGCCCATGCGGCCAACCTCCTCACTGAAGGCTaGCTTTTGCAGCTCGAAGGC +
Preference number: 4 (lower is better)
Translates to: VIHVLDGEAEDLNAHAANLLTEG*LLQLEG
Trigger: GCCTTCGAGCTGCAAAAGTCAGCCTTCAGTGAGGAG...GTTGGCCGCATGGGCATTGAGATCCTCAGCTTCACCATCAAGGACGTGTATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR TCA 90 bp TGCAGCTCGAAGGCTCGCTTAGAGTCAGCAATCTTGGTGTCTGCCATGAACTTCGGTAGGCTTCTGCCTTaGGCTTCATCCGCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: CSSKARLESAILVSAMNFGRLLP*ASSAQP
Trigger: AGGCTGAGCGGATGAAGCTCAAGGCAGAAGCCTACC...GAAGTTCATGGCAGACACCAAGATTGCTGACTCTAAGCGAGCCTTCGAGCTGCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR TCA 90 bp GCAGTGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGGGTTCACTTCTGATGTaGCCTTACTGTTGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: AVGQCNIQAPDQTCSIHMGSLLM*PYCCLH
Trigger: GTGGAGACAACAGTAAGGTCACATCAGAAGTGAACC...CATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp ACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTCCATCAGTCGGTTCACTTCTaGTGTGACCTTACTGTTGTC +
Preference number: 4 (lower is better)
Translates to: TFTAPLPRRLGPGLFCLHQSVHF*CDLTVV
Trigger: GACAACAGTAAGGTCACATCAGAAGTGAACCGACTG...ATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp GGTCTGGCCAGGCTACAGCACTCGATTCTGTACAGGGTTGGCACAGCCTTGTCCCAGTCGGTTCACTTCTaGTGTGACCTTACTGTTGTC +
Preference number: 4 (lower is better)
Translates to: GLARLQHSILYRVGTALSQSVHF*CDLTVV
Trigger: GACAACAGTAAGGTCACATCAGAAGTGAACCGACTG...GGACAAGGCTGTGCCAACCCTGTACAGAATCGAGTGCTGTAGCCTGGCCAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp CCCAGACCAGACATGCAGCATCCACATGCAGGAAGAGCTACACAGGCTGGGGCAAGACACGCAGGGAGATaGGACACAAACCTGATGAAA +
Preference number: 4 (lower is better)
Translates to: PRPDMQHPHAGRATQAGARHAGR*DTNLMK
Trigger: TTTCATCAGGTTTGTGTCTCATCTCCCTGCGTGTCT...TGCCCCAGCCTGTGTAGCTCTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp ACGCAGCACTTCTGGTCCCTTCGAGATAAGGCACCAGAGTCAGTAACGTTCCCGTGTCCCTCCAGGGTCTaGAGGACGACGTTTTTGATG +
Preference number: 4 (lower is better)
Translates to: TQHFWSLRDKAPESVTFPCPSRV*RTTFLM
Trigger: CATCAAAAACGTCGTCCTGCAGACCCTGGAGGGACA...CGGGAACGTTACTGACTCTGGTGCCTTATCTCGAAGGGACCAGAAGTGCTGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp CTAGACCCTCATCTCAGAAAACTTAGCAGAGTTGGGACCAAACCGCACCGCCCCTGTCCCTCCAGGGTCTaGAGGACGACGTTTTTGATG +
Preference number: 4 (lower is better)
Translates to: LDPHLRKLSRVGTKPHRPCPSRV*RTTFLM
Trigger: CATCAAAAACGTCGTCCTGCAGACCCTGGAGGGACA...GGGGCGGTGCGGTTTGGTCCCAACTCTGCTAAGTTTTCTGAGATGAGGGTCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp ACACGCAGGGAGATGAGACACAAACCTGATGAAAGTGGCAGTGAAAGTGGGGTAACTCAGCTTCCCGGATaGCTGCGTCCCGTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: TRREMRHKPDESGSESGVTQLPG*LRPVQP
Trigger: AGGCTGAACGGGACGCAGGCATCCGGGAAGCTGAGT...TACCCCACTTTCACTGCCACTTTCATCAGGTTTGTGTCTCATCTCCCTGCGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp GAAGGCTCGCTTAGAGTCAGCAATCTTGGTGTCTGCCATGAACTTCACATCCAGACTCAGCTTCCCGGATaGCTGCGTCCCGTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: EGSLRVSNLGVCHELHIQTQLPG*LRPVQP
Trigger: AGGCTGAACGGGACGCAGGCATCCGGGAAGCTGAGT...CTGGATGTGAAGTTCATGGCAGACACCAAGATTGCTGACTCTAAGCGAGCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR GCA 90 bp GAGGATGGACAGATGCACAGAGAACTTCAAGGCACCAGGATTCTGAGGAGCAGCCCAGCATCTCCTTCTTaGACTCAGCTTCCCGGATGC +
Preference number: 4 (lower is better)
Translates to: EDGQMHRELQGTRILRSSPASPS*TQLPGC
Trigger: GCATCCGGGAAGCTGAGTGCAAGAAGGAGATGCTGG...GCTGCTCCTCAGAATCCTGGTGCCTTGAAGTTCTCTGTGCATCTGTCCATCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp TTCAGCCTCGGCCACGCCAATGTCAGCATCTCTCTGCACCACGGCAGTCTGCGTAGCAATCTTGGTGTCTaGCATGAACTTCACATCCAG +
Preference number: 4 (lower is better)
Translates to: FSLGHANVSISLHHGSLRSNLGV*HELHIQ
Trigger: CTGGATGTGAAGTTCATGGCAGACACCAAGATTGCT...ACGCAGACTGCCGTGGTGCAGAGAGATGCTGACATTGGCGTGGCCGAGGCTGAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR GCA 90 bp GATGTGACCTTACTGTTGTCTCCACTGAGGACCACAATCTCATCGACCTTGGTATCCTGCCGGATCTTCTaGTGTTCACGGGCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: DVTLLLSPLRTTISSTLVSCRIF*CSRAPC
Trigger: GCAGGGGGCCCGTGAACAGCAGAAGATCCGGCAGGA...TACCAAGGTCGATGAGATTGTGGTCCTCAGTGGAGACAACAGTAAGGTCACATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR GCA 90 bp CTAGACCCTCATCTCAGAAAACTTAGCAGAGTTGGGACCAAACCGCACCGCCCCACGCAGGATCTCCTGTaGCTCCACGGCAATCTGTTT +
Preference number: 4 (lower is better)
Translates to: LDPHLRKLSRVGTKPHRPTQDLL*LHGNLF
Trigger: AAACAGATTGCCGTGGAGGCACAGGAGATCCTGCGT...GGGGCGGTGCGGTTTGGTCCCAACTCTGCTAAGTTTTCTGAGATGAGGGTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp ATGAGCTCCTTGTCCGTACGCAGGATCTCCTGTGCCTCCACGGCAATCTGTTTCTGTGCCAAGAGGACCTaGTTCACCTTTTCACCCTCG +
Preference number: 4 (lower is better)
Translates to: MSSLSVRRISCASTAICFCAKRT*FTFSPS
Trigger: CGAGGGTGAAAAGGTGAAGCAGGTCCTCTTGGCACA...GAAACAGATTGCCGTGGAGGCACAGGAGATCCTGCGTACGGACAAGGAGCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR GCA 90 bp TCCTTGTCCGTACGCAGGATCTCCTGTGCCTCCACGGCAATCTGTTTCTTGCGCTTTCTGGTAGGCTTCTaGCTTGAGCTTCATCCGCTC +
Preference number: 4 (lower is better)
Translates to: SLSVRRISCASTAICFLRFLVGF*LELHPL
Trigger: GAGCGGATGAAGCTCAAGGCAGAAGCCTACCAGAAA...GCGCAAGAAACAGATTGCCGTGGAGGCACAGGAGATCCTGCGTACGGACAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR GCA 90 bp GAAGGCTCGCTTAGAGTCAGCAATCTTGGTGTCTGCCATGAACTTCACATCCAGAGTGTCTCTGGGCCCTaGAGGTCATGGCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: EGSLRVSNLGVCHELHIQSVSGP*RSWLPR
Trigger: TCTGGGCAGCCATGACCTGCAGGGCCCAGAGACACT...CTGGATGTGAAGTTCATGGCAGACACCAAGATTGCTGACTCTAAGCGAGCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580805.5
CDS-3UTR GCA 90 bp ACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAAGAGCTACACAGACAGAGGATTGGGTTaGTTCCCCATGGCTGGAACC +
Preference number: 4 (lower is better)
Translates to: TSKPQTRHAASTCRKSYTDRGLG*FPMAGT
Trigger: GGTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTC...TGTGTAGCTCTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp TGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAAGAGCTAGCCCCAGACCAGACATaGAGCATCCACATGCAGGAA +
Preference number: 4 (lower is better)
Translates to: CNIQAPDQTCSIHMQEELAPDQT*SIHMQE
Trigger: TTCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGC...TAGCTCTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp ACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAAGAGCTACACAGCCCCAGACCAGACATaGAGCATCCACATGCAGGAA +
Preference number: 4 (lower is better)
Translates to: TSKPQTRHAASTCRKSYTAPDQT*SIHMQE
Trigger: TTCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGC...TGTGTAGCTCTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp AGGGAGGATGGACAGATGCACAGAGAACTTCAAGGCACCAGGATTCTGAGGAGCGCCCCAGACCAGACATaGAGCATCCACATGCAGGAA +
Preference number: 4 (lower is better)
Translates to: REDGQMHRELQGTRILRSAPDQT*SIHMQE
Trigger: TTCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGC...GCTCCTCAGAATCCTGGTGCCTTGAAGTTCTCTGTGCATCTGTCCATCCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp ACACGCAGGGAGATGAGACACAAACCTGATGAAAGTGGCAGTGAAAGTGGGGTATCAGGGTCCCGAGGATaGAGCGCAGATGTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: TRREMRHKPDESGSESGVSGSRG*SADVPP
Trigger: TGGAGGGACATCTGCGCTCCATCCTCGGGACCCTGA...TACCCCACTTTCACTGCCACTTTCATCAGGTTTGTGTCTCATCTCCCTGCGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp TTGATGTTAACCTCCTCACTGAAGGCTGACTTTTGCAGCTCGAAGGCTCGCTTACCTCCCGCACCAGCTTaGCAAACTGGTCCCGGTCCT +
Preference number: 4 (lower is better)
Translates to: LMLTSSLKADFCSSKARLPPAPA*QTGPGP
Trigger: AGGACCGGGACCAGTTTGCCAAGCTGGTGCGGGAGG...TAAGCGAGCCTTCGAGCTGCAAAAGTCAGCCTTCAGTGAGGAGGTTAACATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR CCA 90 bp GTGACCTTACTGTTGTCTCCACTGAGGACCACAATCTCATCGACCTTGGTAAGTGGTATGAGCGCTGGCTaGGGCCTTGGGTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: VTLLLSPLRTTISSTLVSGMSAG*GLGWMR
Trigger: CCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACC...ACTTACCAAGGTCGATGAGATTGTGGTCCTCAGTGGAGACAACAGTAAGGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580805.5
CDS-3UTR CCA 90 bp AGGGAGGATGGACAGATGCACAGAGAACTTCAAGGCACCAGGATTCTGAGGAGCAGAAGGGACAGGCAGTaGGGCAGTGCAACATCCAAG +
Preference number: 4 (lower is better)
Translates to: REDGQMHRELQGTRILRSRRDRQ*GSATSK
Trigger: CTTGGATGTTGCACTGCCCCACTGCCTGTCCCTTCT...GCTCCTCAGAATCCTGGTGCCTTGAAGTTCTCTGTGCATCTGTCCATCCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR CAA 72 bp CGCAGGATCTCCTGTGCCTCCACGGCAATCTGTTTCTaGCGCTGCACAACCTCAATCTCAATCTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: RRISCASTAICF*RCTTSISISSC
Trigger: GCAGGAAGAGATTGAGATTGAGGTTGTGCAGCGCAAGAAACAGATTGCCGTGGAGGCACAGGAGATCCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR TCA 90 bp TTTTGGCAGCAATCTGGGGCAGGGCCTCTAGCACCAAGGCCATCTTGGCTGCATGGTTCACTTCTGATGTaGCCTTACTGTTGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: FWQQSGAGPLAPRPSWLHGSLLM*PYCCLH
Trigger: GTGGAGACAACAGTAAGGTCACATCAGAAGTGAACC...ATGCAGCCAAGATGGCCTTGGTGCTAGAGGCCCTGCCCCAGATTGCTGCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR TCA 90 bp GCCTCCATTGGAGCAAGGAGACAGAGGATTGGGTTGCTTCCCCATGGCTGGAACCAGTCGGTTCACTTCTaGTGTGACCTTACTGTTGTC +
Preference number: 4 (lower is better)
Translates to: ASIGARRQRIGLLPHGWNQSVHF*CDLTVV
Trigger: GACAACAGTAAGGTCACATCAGAAGTGAACCGACTG...GTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCTCCTTGCTCCAATGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp ACAGGGTATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCACGTTTTTGATGTCCTaGACATTCTTACCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: TGYERWLGPWVDEGKDSVTFLMS*TFLPRN
Trigger: GTTTCTGGGTAAGAATGTGCAGGACATCAAAAACGT...GACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp GCAGTGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGATCTCAATCTCTTCCTaGCGGATCTTCTGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: AVGQCNIQAPDQTCSIHMISISS*RIFCCS
Trigger: TGAACAGCAGAAGATCCGGCAGGAAGAGATTGAGAT...CATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp ACACGCAGGGAGATGAGACACAAACCTGATGAAAGTGGCAGTGAAAGTGGGGTACCGCCTCCCCGATTTTaGGGATCTTCTCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: TRREMRHKPDESGSESGVPPPRF*GSSQPL
Trigger: CAGAGGCTGAGAAGATCCGCAAAATCGGGGAGGCGG...TACCCCACTTTCACTGCCACTTTCATCAGGTTTGTGTCTCATCTCCCTGCGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp TTGCGCTGCACAACCTCAATCTCAATCTCTTCCTGCCGGATCTTCTGCTGTTCACCGCCTCCCCGATTTTaGGGATCTTCTCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LRCTTSISISSCRIFCCSPPPRF*GSSQPL
Trigger: CAGAGGCTGAGAAGATCCGCAAAATCGGGGAGGCGG...TGAACAGCAGAAGATCCGGCAGGAAGAGATTGAGATTGAGGTTGTGCAGCGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR GCA 90 bp CTAGACCCTCATCTCAGAAAACTTAGCAGAGTTGGGACCAAACCGCACCGCCCCCAAGGCCATCTTGGCTaGATCCCCGTATTTCTGGTA +
Preference number: 4 (lower is better)
Translates to: LDPHLRKLSRVGTKPHRPQGHLG*IPVFLV
Trigger: TACCAGAAATACGGGGATGCAGCCAAGATGGCCTTG...GGGGCGGTGCGGTTTGGTCCCAACTCTGCTAAGTTTTCTGAGATGAGGGTCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp CAACCTCAATCTCAATCTCTTCCTGCCGGATCTTCTGCTGTTCACGGGCCCCCTCAAGGCCATCTTGGCTaGATCCCCGTATTTCTGGTA +
Preference number: 4 (lower is better)
Translates to: QPQSQSLPAGSSAVHGPPQGHLG*IPVFLV
Trigger: TACCAGAAATACGGGGATGCAGCCAAGATGGCCTTG...AGGGGGCCCGTGAACAGCAGAAGATCCGGCAGGAAGAGATTGAGATTGAGGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR GCA 90 bp CGCTTAGAGTCAGCAATCTTGGTGTCTGCCATGAACTTCACATCCAGCATCTCCGGTCCTGGGCTCTTCTaGCTCCATTGGAGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: RLESAILVSAMNFTSSISGPGLF*LHWSKE
Trigger: CTCCTTGCTCCAATGGAGGCAGAAGAGCCCAGGACC...GGAGATGCTGGATGTGAAGTTCATGGCAGACACCAAGATTGCTGACTCTAAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580805.5
CDS-3UTR CCA 90 bp GCCTCCATTGGAGCAAGGAGACAGAGGATTGGGTTGCTTCCCCATGGCTGGAACATCTCTAGGGAAATCTaGCAGACTTGGCAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: ASIGARRQRIGLLPHGWNISREI*QTWQSF
Trigger: GAAGCTCTGCCAAGTCTGCCAGATTTCCCTAGAGAT...GTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCTCCTTGCTCCAATGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394906.6
CDS-3UTR CCA 90 bp TGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAAGAGCTAGTCATGATCTTCACCTaGGCGACACCCGTCACAGTT +
Preference number: 4 (lower is better)
Translates to: CNIQAPDQTCSIHMQEELVMIFT*ATPVTV
Trigger: AACTGTGACGGGTGTCGCCCAGGTGAAGATCATGAC...TAGCTCTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
CDS-3UTR CCA 90 bp GAGGATGGACAGATGCACAGAGAACTTCAAGGCACCAGGATTCTGAGGAGCAGCGCACCAAGGCCATCTTaGCTGCATCCCCGTATTTCT +
Preference number: 4 (lower is better)
Translates to: EDGQMHRELQGTRILRSSAPRPS*LHPRIS
Trigger: AGAAATACGGGGATGCAGCCAAGATGGCCTTGGTGC...GCTGCTCCTCAGAATCCTGGTGCCTTGAAGTTCTCTGTGCATCTGTCCATCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR CAA 72 bp CTTCGAGATAAGGCACCAGAGTCAGTAACGTTCCCGTaGTTCTGTGGGATTAAAACGGGTGCTGGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LRDKAPESVTFP*FCGIKTGAGGR
Trigger: CCTCCCTCCAGCACCCGTTTTAATCCCACAGAACAACGGGAACGTTACTGACTCTGGTGCCTTATCTCGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
3UTR CAA 72 bp CTGTTGTCTCCACTGAGGACCACAATCTCATCGACCTaGGTAAGTGGGGCAGCGATTTTGGCAGCAATCTGG +
Preference number: 4 (lower is better)
Translates to: LLSPLRTTISST*VSGAAILAAIW
Trigger: CCAGATTGCTGCCAAAATCGCTGCCCCACTTACCAAGGTCGATGAGATTGTGGTCCTCAGTGGAGACAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR GCA 90 bp ACACGCAGGGAGATGAGACACAAACCTGATGAAAGTGGCAGTGAAAGTGGGGTACCAGCATCTCCTTCTTaGACTCAGCTTCCCGGATGC +
Preference number: 4 (lower is better)
Translates to: TRREMRHKPDESGSESGVPASPS*TQLPGC
Trigger: GCATCCGGGAAGCTGAGTGCAAGAAGGAGATGCTGG...TACCCCACTTTCACTGCCACTTTCATCAGGTTTGTGTCTCATCTCCCTGCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp GTCATACACGTCCTTGATGGTGAAGCTGAGGATCTCAATGCCCATGCGGCCAACCTGAAGGCTGACTTTTaGAGCTCGAAGGCTCGCTTA +
Preference number: 4 (lower is better)
Translates to: VIHVLDGEAEDLNAHAANLKADF*SSKARL
Trigger: TAAGCGAGCCTTCGAGCTGCAAAAGTCAGCCTTCAG...GTTGGCCGCATGGGCATTGAGATCCTCAGCTTCACCATCAAGGACGTGTATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR GCA 90 bp TCCTTGTCCGTACGCAGGATCTCCTGTGCCTCCACGGCAATCTGTTTCTTGCGCATCTCAATCTCTTCCTaGCGGATCTTCTGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: SLSVRRISCASTAICFLRISISS*RIFCCS
Trigger: TGAACAGCAGAAGATCCGGCAGGAAGAGATTGAGAT...GCGCAAGAAACAGATTGCCGTGGAGGCACAGGAGATCCTGCGTACGGACAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR GCA 90 bp TGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGATCTGTTTCTTGCGCTaGACAACCTCAATCTCAATC +
Preference number: 4 (lower is better)
Translates to: WGSATSKPQTRHAASTCRICFLR*TTSISI
Trigger: GATTGAGATTGAGGTTGTGCAGCGCAAGAAACAGAT...CCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp CAGTGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCATCTGTTTCTTGCGCTaGACAACCTCAATCTCAATC +
Preference number: 4 (lower is better)
Translates to: QWGSATSKPQTRHAASTCICFLR*TTSISI
Trigger: GATTGAGATTGAGGTTGTGCAGCGCAAGAAACAGAT...GCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp GCCAACTGGGCCTCAGCTGTCTTGATGTTAACCTCCTCACTGAAGGCTGACTTTACGCAGGATCTCCTGTaGCTCCACGGCAATCTGTTT +
Preference number: 4 (lower is better)
Translates to: ANWASAVLMLTSSLKADFTQDLL*LHGNLF
Trigger: AAACAGATTGCCGTGGAGGCACAGGAGATCCTGCGT...AAAGTCAGCCTTCAGTGAGGAGGTTAACATCAAGACAGCTGAGGCCCAGTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR GCA 90 bp GTGACCTTACTGTTGTCTCCACTGAGGACCACAATCTCATCGACCTTGGTAAGTCTCAGCCTCTGCCTGTaGCAAGAGGACCTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: VTLLLSPLRTTISSTLVSLSLCL*QEDLLH
Trigger: GTGAAGCAGGTCCTCTTGGCACAGGCAGAGGCTGAG...ACTTACCAAGGTCGATGAGATTGTGGTCCTCAGTGGAGACAACAGTAAGGTCAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR CCA 90 bp CGTCTTGCCCAGGGAGCTCAGATAGTCCACTTTGTCATACACGTCCTTGATGGTGCACCAAGGCCATCTTaGCTGCATCCCCGTATTTCT +
Preference number: 4 (lower is better)
Translates to: RLAQGAQIVHFVIHVLDGAPRPS*LHPRIS
Trigger: AGAAATACGGGGATGCAGCCAAGATGGCCTTGGTGC...ACCATCAAGGACGTGTATGACAAAGTGGACTATCTGAGCTCCCTGGGCAAGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR CCA 90 bp GCCAACTGGGCCTCAGCTGTCTTGATGTTAACCTCCTCACTGAAGGCTGACTTTGCACCAAGGCCATCTTaGCTGCATCCCCGTATTTCT +
Preference number: 4 (lower is better)
Translates to: ANWASAVLMLTSSLKADFAPRPS*LHPRIS
Trigger: AGAAATACGGGGATGCAGCCAAGATGGCCTTGGTGC...AAAGTCAGCCTTCAGTGAGGAGGTTAACATCAAGACAGCTGAGGCCCAGTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR CCA 90 bp ACACGCAGGGAGATGAGACACAAACCTGATGAAAGTGGCAGTGAAAGTGGGGTAATTTTGGCAGCAATCTaGGGCAGGGCCTCTAGCACC +
Preference number: 4 (lower is better)
Translates to: TRREMRHKPDESGSESGVILAAI*GRASST
Trigger: GGTGCTAGAGGCCCTGCCCCAGATTGCTGCCAAAAT...TACCCCACTTTCACTGCCACTTTCATCAGGTTTGTGTCTCATCTCCCTGCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp AAGGCTGACTTTTGCAGCTCGAAGGCTCGCTTAGAGTCAGCAATCTTGGTGTCTATTTTGGCAGCAATCTaGGGCAGGGCCTCTAGCACC +
Preference number: 4 (lower is better)
Translates to: KADFCSSKARLESAILVSILAAI*GRASST
Trigger: GGTGCTAGAGGCCCTGCCCCAGATTGCTGCCAAAAT...AGACACCAAGATTGCTGACTCTAAGCGAGCCTTCGAGCTGCAAAAGTCAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR CCA 90 bp ACACGCAGGGAGATGAGACACAAACCTGATGAAAGTGGCAGTGAAAGTGGGGTAAAGACGCTTGGGTCCTaGGCTCTTCTGCCTCCATTG +
Preference number: 4 (lower is better)
Translates to: TRREMRHKPDESGSESGVKTLGS*ALLPPL
Trigger: CAATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTT...TACCCCACTTTCACTGCCACTTTCATCAGGTTTGTGTCTCATCTCCCTGCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp ACACGCAGGGAGATGAGACACAAACCTGATGAAAGTGGCAGTGAAAGTGGGGTAAGAAGGGACAGGCAGTaGGGCAGTGCAACATCCAAG +
Preference number: 4 (lower is better)
Translates to: TRREMRHKPDESGSESGVRRDRQ*GSATSK
Trigger: CTTGGATGTTGCACTGCCCCACTGCCTGTCCCTTCT...TACCCCACTTTCACTGCCACTTTCATCAGGTTTGTGTCTCATCTCCCTGCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp GTCATACACGTCCTTGATGGTGAAGCTGAGGATCTCAATGCCCATGCGGCCAACTCTTGGTGTCTGCCATaGACTTCACATCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: VIHVLDGEAEDLNAHAANSWCLP*TSHPAS
Trigger: AGATGCTGGATGTGAAGTTCATGGCAGACACCAAGA...GTTGGCCGCATGGGCATTGAGATCCTCAGCTTCACCATCAAGGACGTGTATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR GCA 90 bp CAGTGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCACGTTTTTGATGTCCTaGACATTCTTACCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: QWGSATSKPQTRHAASTCTFLMS*TFLPRN
Trigger: GTTTCTGGGTAAGAATGTGCAGGACATCAAAAACGT...GCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp GTGACCTTACTGTTGTCTCCACTGAGGACCACAATCTCATCGACCTTGGTAAGTATGTCAGCATCTCTCTaGACCACGGCAGTCTGCGTC +
Preference number: 4 (lower is better)
Translates to: VTLLLSPLRTTISSTLVSMSASL*TTAVCV
Trigger: GACGCAGACTGCCGTGGTGCAGAGAGATGCTGACAT...ACTTACCAAGGTCGATGAGATTGTGGTCCTCAGTGGAGACAACAGTAAGGTCAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR GCA 90 bp ATGAGCTCCTTGTCCGTACGCAGGATCTCCTGTGCCTCCACGGCAATCTGTTTCAGCAATCTTGGTGTCTaGCATGAACTTCACATCCAG +
Preference number: 4 (lower is better)
Translates to: MSSLSVRRISCASTAICFSNLGV*HELHIQ
Trigger: CTGGATGTGAAGTTCATGGCAGACACCAAGATTGCT...GAAACAGATTGCCGTGGAGGCACAGGAGATCCTGCGTACGGACAAGGAGCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR GCA 90 bp ATGGAGCGCAGATGTCCCTCCAGGGTCTGCAGGACGACGTTTTTGATGTCCTGCATCTGTTTCTTGCGCTaGACAACCTCAATCTCAATC +
Preference number: 4 (lower is better)
Translates to: MERRCPSRVCRTTFLMSCICFLR*TTSISI
Trigger: GATTGAGATTGAGGTTGTGCAGCGCAAGAAACAGAT...GCAGGACATCAAAAACGTCGTCCTGCAGACCCTGGAGGGACATCTGCGCTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580805.5
CDS-3UTR GCA 90 bp TGTGACCTTACTGTTGTCTCCACTGAGGACCACAATCTCATCGACCTTGGTAAGCAACACCCAGGACAGTaGAGCCCTAGCAGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: CDLTVVSTEDHNLIDLGKQHPGQ*SPSRKK
Trigger: CTTCTTCCTGCTAGGGCTGCACTGTCCTGGGTGTTG...CTTACCAAGGTCGATGAGATTGTGGTCCTCAGTGGAGACAACAGTAAGGTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580805.5
CDS-3UTR CCA 90 bp AAGGCTGACTTTTGCAGCTCGAAGGCTCGCTTAGAGTCAGCAATCTTGGTGTCTGGAACCCCATCACTCTaGCCAGGAAGAAAGATGGCA +
Preference number: 4 (lower is better)
Translates to: KADFCSSKARLESAILVSGTPSL*PGRKMA
Trigger: TGCCATCTTTCTTCCTGGCCAGAGTGATGGGGTTCC...AGACACCAAGATTGCTGACTCTAAGCGAGCCTTCGAGCTGCAAAAGTCAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580805.5
CDS-3UTR CCA 90 bp CGCTTAGAGTCAGCAATCTTGGTGTCTGCCATGAACTTCACATCCAGCATCTCCAAGGAGACAGAGGATTaGGTTGCTTCCCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: RLESAILVSAMNFTSSISKETED*VASPWL
Trigger: CAGCCATGGGGAAGCAACCCAATCCTCTGTCTCCTT...GGAGATGCTGGATGTGAAGTTCATGGCAGACACCAAGATTGCTGACTCTAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580805.5
CDS-3UTR TCA 90 bp GCCAACTGGGCCTCAGCTGTCTTGATGTTAACCTCCTCACTGAAGGCTGACTTTGGTTCACTTCTGATGTaGCCTTACTGTTGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: ANWASAVLMLTSSLKADFGSLLM*PYCCLH
Trigger: GTGGAGACAACAGTAAGGTCACATCAGAAGTGAACC...AAAGTCAGCCTTCAGTGAGGAGGTTAACATCAAGACAGCTGAGGCCCAGTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR TCA 90 bp ACACGCAGGGAGATGAGACACAAACCTGATGAAAGTGGCAGTGAAAGTGGGGTATCTAGGGAAATCCTCTaGGTGTCGGAGATACACCAC +
Preference number: 4 (lower is better)
Translates to: TRREMRHKPDESGSESGVSREIL*VSEIHH
Trigger: GTGGTGTATCTCCGACACTCAGAGGATTTCCCTAGA...TACCCCACTTTCACTGCCACTTTCATCAGGTTTGTGTCTCATCTCCCTGCGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394908.9
CDS-3UTR GCA 90 bp AGGGAGGATGGACAGATGCACAGAGAACTTCAAGGCACCAGGATTCTGAGGAGCAGCAATCTTGGTGTCTaGCATGAACTTCACATCCAG +
Preference number: 4 (lower is better)
Translates to: REDGQMHRELQGTRILRSSNLGV*HELHIQ
Trigger: CTGGATGTGAAGTTCATGGCAGACACCAAGATTGCT...GCTCCTCAGAATCCTGGTGCCTTGAAGTTCTCTGTGCATCTGTCCATCCTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp GTCAGCAATCTTGGTGTCTGCCATGAACTTCACATCCAGCATCTCCTTCTTGCAACGCAGGATCTCCTGTaGCTCCACGGCAATCTGTTT +
Preference number: 4 (lower is better)
Translates to: VSNLGVCHELHIQHLLLATQDLL*LHGNLF
Trigger: AAACAGATTGCCGTGGAGGCACAGGAGATCCTGCGT...TGCAAGAAGGAGATGCTGGATGTGAAGTTCATGGCAGACACCAAGATTGCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR CCA 90 bp GTCAGCAATCTTGGTGTCTGCCATGAACTTCACATCCAGCATCTCCTTCTTGCAATCGACCTTGGTAAGTaGGGCAGCGATTTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: VSNLGVCHELHIQHLLLAIDLGK*GSDFGS
Trigger: GCTGCCAAAATCGCTGCCCCACTTACCAAGGTCGAT...TGCAAGAAGGAGATGCTGGATGTGAAGTTCATGGCAGACACCAAGATTGCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
3UTR CAA 72 bp TTTTGCAGCTCGAAGGCTCGCTTAGAGTCAGCAATCTaGGTGTCTGCCATGAACTTCACATCCAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: FCSSKARLESAI*VSAMNFTSSIS
Trigger: GGAGATGCTGGATGTGAAGTTCATGGCAGACACCAAGATTGCTGACTCTAAGCGAGCCTTCGAGCTGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR GCA 90 bp TTGATGTTAACCTCCTCACTGAAGGCTGACTTTTGCAGCTCGAAGGCTCGCTTATTTCTGGTAGGCTTCTaGCTTGAGCTTCATCCGCTC +
Preference number: 4 (lower is better)
Translates to: LMLTSSLKADFCSSKARLFLVGF*LELHPL
Trigger: GAGCGGATGAAGCTCAAGGCAGAAGCCTACCAGAAA...TAAGCGAGCCTTCGAGCTGCAAAAGTCAGCCTTCAGTGAGGAGGTTAACATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR CCA 90 bp GAGAGTGATTGTAATAAACATCTTCAGCTTAATCTACATGATGTGCATGGGGGAGGTATGAGCGCTGGCTaGGGCCTTGGGTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: ESDCNKHLQLNLHDVHGGGMSAG*GLGWMR
Trigger: CCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACC...TCCCCCATGCACATCATGTAGATTAAGCTGAAGATGTTTATTACAATCACTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp GTCAGCAATCTTGGTGTCTGCCATGAACTTCACATCCAGCATCTCCTTCTTGCACAGTCGGTTCACTTCTaGTGTGACCTTACTGTTGTC +
Preference number: 4 (lower is better)
Translates to: VSNLGVCHELHIQHLLLAQSVHF*CDLTVV
Trigger: GACAACAGTAAGGTCACATCAGAAGTGAACCGACTG...TGCAAGAAGGAGATGCTGGATGTGAAGTTCATGGCAGACACCAAGATTGCTGAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR TCA 90 bp GTCAGCAATCTTGGTGTCTGCCATGAACTTCACATCCAGCATCTCCTTCTTGCAAGACACGCAGGGAGATaGGACACAAACCTGATGAAA +
Preference number: 4 (lower is better)
Translates to: VSNLGVCHELHIQHLLLARHAGR*DTNLMK
Trigger: TTTCATCAGGTTTGTGTCTCATCTCCCTGCGTGTCT...TGCAAGAAGGAGATGCTGGATGTGAAGTTCATGGCAGACACCAAGATTGCTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580805.5
CDS-3UTR GCA 90 bp GAGAGTGATTGTAATAAACATCTTCAGCTTAATCTACATGATGTGCATGGGGGAGTAGACAGGAGGCCTTaGCTCTGTGCCCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: ESDCNKHLQLNLHDVHGGVDRRP*LCALGV
Trigger: GACCCCAAGGGCACAGAGGCAAGGCCTCCTGTCTAC...TCCCCCATGCACATCATGTAGATTAAGCTGAAGATGTTTATTACAATCACTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp GAGAGTGATTGTAATAAACATCTTCAGCTTAATCTACATGATGTGCATGGGGGAAAGGGCTCTGGGGTCTaGCCAGGCTACAGCACTCGA +
Preference number: 4 (lower is better)
Translates to: ESDCNKHLQLNLHDVHGGKGSGV*PGYSTR
Trigger: TCGAGTGCTGTAGCCTGGCCAGACCCCAGAGCCCTT...TCCCCCATGCACATCATGTAGATTAAGCTGAAGATGTTTATTACAATCACTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp GATGTGACCTTACTGTTGTCTCCACTGAGGACCACAATCTCATCGACCTTGGTAATCTCAATCTCTTCCTaGCGGATCTTCTGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: DVTLLLSPLRTTISSTLVISISS*RIFCCS
Trigger: TGAACAGCAGAAGATCCGGCAGGAAGAGATTGAGAT...TACCAAGGTCGATGAGATTGTGGTCCTCAGTGGAGACAACAGTAAGGTCACATC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR GCA 90 bp GAGAGTGATTGTAATAAACATCTTCAGCTTAATCTACATGATGTGCATGGGGGACAGGAGCCTCACACCTaGACACCAGTGGCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: ESDCNKHLQLNLHDVHGGQEPHT*TPVAFL
Trigger: CAAGAAGGCCACTGGTGTGCAGGTGTGAGGCTCCTG...TCCCCCATGCACATCATGTAGATTAAGCTGAAGATGTTTATTACAATCACTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp GAGAGTGATTGTAATAAACATCTTCAGCTTAATCTACATGATGTGCATGGGGGAATGTCAGCATCTCTCTaGACCACGGCAGTCTGCGTC +
Preference number: 4 (lower is better)
Translates to: ESDCNKHLQLNLHDVHGGMSASL*TTAVCV
Trigger: GACGCAGACTGCCGTGGTGCAGAGAGATGCTGACAT...TCCCCCATGCACATCATGTAGATTAAGCTGAAGATGTTTATTACAATCACTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp GTCAGCAATCTTGGTGTCTGCCATGAACTTCACATCCAGCATCTCCTTCTTGCAATCTGTTTCTTGCGCTaGACAACCTCAATCTCAATC +
Preference number: 4 (lower is better)
Translates to: VSNLGVCHELHIQHLLLAICFLR*TTSISI
Trigger: GATTGAGATTGAGGTTGTGCAGCGCAAGAAACAGAT...TGCAAGAAGGAGATGCTGGATGTGAAGTTCATGGCAGACACCAAGATTGCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR GCA 90 bp GAGAGTGATTGTAATAAACATCTTCAGCTTAATCTACATGATGTGCATGGGGGACAACACCCAGGACAGTaGAGCCCTAGCAGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: ESDCNKHLQLNLHDVHGGQHPGQ*SPSRKK
Trigger: CTTCTTCCTGCTAGGGCTGCACTGTCCTGGGTGTTG...TCCCCCATGCACATCATGTAGATTAAGCTGAAGATGTTTATTACAATCACTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp GTGATTGTAATAAACATCTTCAGCTTAATCTACATGATGTGCATGGGGGAAAGAGGCCAGGAAGAAAGATaGCACAAGGGCTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: VIVINIFSLIYMMCMGERGQEER*HKGSGV
Trigger: GACCCCAGAGCCCTTGTGCCATCTTTCTTCCTGGCC...TCTTTCCCCCATGCACATCATGTAGATTAAGCTGAAGATGTTTATTACAATCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR TCA 90 bp GTGATTGTAATAAACATCTTCAGCTTAATCTACATGATGTGCATGGGGGAAAGAGTTCCTTCTCCGTCATaGTCTTCACCTGGGCGACAC +
Preference number: 4 (lower is better)
Translates to: VIVINIFSLIYMMCMGERVPSPS*SSPGRH
Trigger: GTGTCGCCCAGGTGAAGATCATGACGGAGAAGGAAC...TCTTTCCCCCATGCACATCATGTAGATTAAGCTGAAGATGTTTATTACAATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
CDS-3UTR GCA 90 bp GTGATTGTAATAAACATCTTCAGCTTAATCTACATGATGTGCATGGGGGAAAGATCCTCGCAGCGGGGCTaGAACGTCATAATCTCTAGG +
Preference number: 4 (lower is better)
Translates to: VIVINIFSLIYMMCMGERSSQRG*NVIISR
Trigger: CCTAGAGATTATGACGTTGCAGCCCCGCTGCGAGGA...TCTTTCCCCCATGCACATCATGTAGATTAAGCTGAAGATGTTTATTACAATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
CDS-3UTR GCA 90 bp GAGAGTGATTGTAATAAACATCTTCAGCTTAATCTACATGATGTGCATGGGGGATTCTTACCCAGAAACTaGTCACAAGCCACGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ESDCNKHLQLNLHDVHGGFLPRN*SQATAR
Trigger: CCTGGCCGTGGCTTGTGAGCAGTTTCTGGGTAAGAA...TCCCCCATGCACATCATGTAGATTAAGCTGAAGATGTTTATTACAATCACTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp ACAGAGAGTGATTGTAATAAACATCTTCAGCTTAATCTACATGATGTGCATGGGATTTTGGCAGCAATCTaGGGCAGGGCCTCTAGCACC +
Preference number: 4 (lower is better)
Translates to: TESDCNKHLQLNLHDVHGILAAI*GRASST
Trigger: GGTGCTAGAGGCCCTGCCCCAGATTGCTGCCAAAAT...CCCATGCACATCATGTAGATTAAGCTGAAGATGTTTATTACAATCACTCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp GAGAGTGATTGTAATAAACATCTTCAGCTTAATCTACATGATGTGCATGGGGGAAAGGAGACAGAGGATTaGGTTGCTTCCCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: ESDCNKHLQLNLHDVHGGKETED*VASPWL
Trigger: CAGCCATGGGGAAGCAACCCAATCCTCTGTCTCCTT...TCCCCCATGCACATCATGTAGATTAAGCTGAAGATGTTTATTACAATCACTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp ACAGAGAGTGATTGTAATAAACATCTTCAGCTTAATCTACATGATGTGCATGGGTGTGCCAAGAGGACCTaGTTCACCTTTTCACCCTCG +
Preference number: 4 (lower is better)
Translates to: TESDCNKHLQLNLHDVHGCAKRT*FTFSPS
Trigger: CGAGGGTGAAAAGGTGAAGCAGGTCCTCTTGGCACA...CCCATGCACATCATGTAGATTAAGCTGAAGATGTTTATTACAATCACTCTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp GTGATTGTAATAAACATCTTCAGCTTAATCTACATGATGTGCATGGGGGAAAGAATCGACCTTGGTAAGTaGGGCAGCGATTTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: VIVINIFSLIYMMCMGERIDLGK*GSDFGS
Trigger: GCTGCCAAAATCGCTGCCCCACTTACCAAGGTCGAT...TCTTTCCCCCATGCACATCATGTAGATTAAGCTGAAGATGTTTATTACAATCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp GTGATTGTAATAAACATCTTCAGCTTAATCTACATGATGTGCATGGGGGAAAGAGGAACCCCATCACTCTaGCCAGGAAGAAAGATGGCA +
Preference number: 4 (lower is better)
Translates to: VIVINIFSLIYMMCMGERGTPSL*PGRKMA
Trigger: TGCCATCTTTCTTCCTGGCCAGAGTGATGGGGTTCC...TCTTTCCCCCATGCACATCATGTAGATTAAGCTGAAGATGTTTATTACAATCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CCA 90 bp GTGATTGTAATAAACATCTTCAGCTTAATCTACATGATGTGCATGGGGGAAAGAGAAATCTGGCAGACTTaGCAGAGCTTCCAGAATCCC +
Preference number: 4 (lower is better)
Translates to: VIVINIFSLIYMMCMGEREIWQT*QSFQNP
Trigger: GGGATTCTGGAAGCTCTGCCAAGTCTGCCAGATTTC...TCTTTCCCCCATGCACATCATGTAGATTAAGCTGAAGATGTTTATTACAATCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394906.6
CDS-3UTR TCA 90 bp GTGATTGTAATAAACATCTTCAGCTTAATCTACATGATGTGCATGGGGGAAAGAGCAGGACGACGTTTTTaGTGTCCTGCACATTCTTAC +
Preference number: 4 (lower is better)
Translates to: VIVINIFSLIYMMCMGERAGRRF*CPAHSY
Trigger: GTAAGAATGTGCAGGACATCAAAAACGTCGTCCTGC...TCTTTCCCCCATGCACATCATGTAGATTAAGCTGAAGATGTTTATTACAATCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR GCA 90 bp ACAGAGAGTGATTGTAATAAACATCTTCAGCTTAATCTACATGATGTGCATGGGACGTTTTTGATGTCCTaGACATTCTTACCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: TESDCNKHLQLNLHDVHGTFLMS*TFLPRN
Trigger: GTTTCTGGGTAAGAATGTGCAGGACATCAAAAACGT...CCCATGCACATCATGTAGATTAAGCTGAAGATGTTTATTACAATCACTCTCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS GCA 90 bp CCCCTGAAACCACCAGCGCCTCGTTGGGCCCCACCGTGTGGCAATTaGCCATGGCGCCGGCGGCACGGAGGGCCCTCGGGACCGCACAGA +
Preference number: 5 (lower is better)
Translates to: PLKPPAPRWAPPCGN*PWRRRHGGPSGPHR
Trigger: TCTGTGCGGTCCCGAGGGCCCTCCGTGCCGCCGGCGCCATGGGCAATTGCCACACGGTGGGGCCCAACGAGGCGCTGGTGGTTTCAGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000582174.5
ENST00000585169.5
CDS CCA 90 bp AAACCACCAGCGCCTCGTTGGGCCCCACCGTGTGGCAATTGCCCATaGCGCCGGCGGCACGGAGGGCCCTCGGGACCGCACAGACCCGGA +
Preference number: 5 (lower is better)
Translates to: KPPAPRWAPPCGNCP*RRRHGGPSGPHRPG
Trigger: TCCGGGTCTGTGCGGTCCCGAGGGCCCTCCGTGCCGCCGGCGCCATGGGCAATTGCCACACGGTGGGGCCCAACGAGGCGCTGGTGGTTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000577789.5
ENST00000580805.5
ENST00000582174.5
ENST00000585169.5
CDS CCA 90 bp CAACAGCCCCCTGAAACCACCAGCGCCTCGTTGGGCCCCACCGTGTaGCAATTGCCCATGGCGCCGGCGGCACGGAGGGCCCTCGGGACC +
Preference number: 5 (lower is better)
Translates to: QQPPETTSASLGPTV*QLPMAPAARRALGT
Trigger: GGTCCCGAGGGCCCTCCGTGCCGCCGGCGCCATGGGCAATTGCCACACGGTGGGGCCCAACGAGGCGCTGGTGGTTTCAGGGGGCTGTTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000582174.5
ENST00000585169.5
CDS GCA 90 bp AGTCTGAAACCACCAGCGCCTCGTTGGGCCCCACCGTGTGGCAATTaGCCATGGCGCCGGCGGCACGGAGGGCCCTCGGGACCGCACAGA +
Preference number: 5 (lower is better)
Translates to: SLKPPAPRWAPPCGN*PWRRRHGGPSGPHR
Trigger: TCTGTGCGGTCCCGAGGGCCCTCCGTGCCGCCGGCGCCATGGGCAATTGCCACACGGTGGGGCCCAACGAGGCGCTGGTGGTTTCAGACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577789.5
CDS CCA 90 bp CAGAGACAGTCTGAAACCACCAGCGCCTCGTTGGGCCCCACCGTGTaGCAATTGCCCATGGCGCCGGCGGCACGGAGGGCCCTCGGGACC +
Preference number: 5 (lower is better)
Translates to: QRQSETTSASLGPTV*QLPMAPAARRALGT
Trigger: GGTCCCGAGGGCCCTCCGTGCCGCCGGCGCCATGGGCAATTGCCACACGGTGGGGCCCAACGAGGCGCTGGTGGTTTCAGACTGTCTCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577789.5
CDS-3UTR CAA 90 bp CTGGGCCCTGCAGGTCATGGCTGCCCAGACCTAGAGGGGCAGCAGCAGGTGAGGCCCACCGTGTGGCAATaGCCCATGGCGCCGGCGGCA +
Preference number: 5 (lower is better)
Translates to: LGPAGHGCPDLEGQQQVRPTVWQ*PMAPAA
Trigger: TGCCGCCGGCGCCATGGGCAATTGCCACACGGTGGG...CCTCACCTGCTGCTGCCCCTCTAGGTCTGGGCAGCCATGACCTGCAGGGCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS CCA 90 bp CTGGGCGGCTCTCACTTTTCACCCTCGGCAATCTGCTGGATGCGGTaGGCCTCGGCCTCGGCAGGCCGGCGCACTGTAGCGATGAGCTCC +
Preference number: 5 (lower is better)
Translates to: LGGSHFSPSAICWMR*ASASAGRRTVAMSS
Trigger: GGAGCTCATCGCTACAGTGCGCCGGCCTGCCGAGGCCGAGGCCCACCGCATCCAGCAGATTGCCGAGGGTGAAAAGTGAGAGCCGCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593158.1
CDS-3UTR CAA 90 bp ACAGGGTATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCCCCACCGTGTGGCAATaGCCCATGGCGCCGGCGGCA +
Preference number: 5 (lower is better)
Translates to: TGYERWLGPWVDEGKDSVPTVWQ*PMAPAA
Trigger: TGCCGCCGGCGCCATGGGCAATTGCCACACGGTGGG...GACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp GTCCCGTTCAGCCTCGGCCACGCCAATGTCAGCATCTCTCTGCACCACGGCAGTCCCACCGTGTGGCAATaGCCCATGGCGCCGGCGGCA +
Preference number: 5 (lower is better)
Translates to: VPFSLGHANVSISLHHGSPTVWQ*PMAPAA
Trigger: TGCCGCCGGCGCCATGGGCAATTGCCACACGGTGGG...ACTGCCGTGGTGCAGAGAGATGCTGACATTGGCGTGGCCGAGGCTGAACGGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR CAA 90 bp CTGGGCCCTGCAGGTCATGGCTGCCCAGACCTAGAGGGGCAGCAGCAGGTGAGGCGCTCAGCCTCTGCCTaGCCCATCGCCTCGATGACT +
Preference number: 5 (lower is better)
Translates to: LGPAGHGCPDLEGQQQVRRSASA*PIASMT
Trigger: AGTCATCGAGGCGATGGGCAAGGCAGAGGCTGAGCG...CCTCACCTGCTGCTGCCCCTCTAGGTCTGGGCAGCCATGACCTGCAGGGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp GGCCTCGGCCTCGGCAGGCCGGCGCACTGTAGCGATGAGCTCCTTGTCCGTACGTCCGCCTCCCCGATTTaGCGGATCTTCTCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: GLGLGRPAHCSDELLVRTSASPI*RIFSAS
Trigger: AGAGGCTGAGAAGATCCGCAAAATCGGGGAGGCGGA...CGTACGGACAAGGAGCTCATCGCTACAGTGCGCCGGCCTGCCGAGGCCGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR CAA 90 bp CGGCGCACTGTAGCGATGAGCTCCTTGTCCGTACGCAGGATCTCCTGTGCCTCCCCCCTGCCAAGACGCTaGGGTCCTGGGCTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: RRTVAMSSLSVRRISCASPLPRR*GPGLFC
Trigger: GCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGG...GGAGGCACAGGAGATCCTGCGTACGGACAAGGAGCTCATCGCTACAGTGCGCCG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000580805.5
CDS-3UTR CAA 90 bp AAACTTAGCAGAGTTGGGACCAAACCGCACCGCCCCAGCAGGAACATGCCCATGCCCACCGTGTGGCAATaGCCCATGGCGCCGGCGGCA +
Preference number: 5 (lower is better)
Translates to: KLSRVGTKPHRPSRNMPMPTVWQ*PMAPAA
Trigger: TGCCGCCGGCGCCATGGGCAATTGCCACACGGTGGG...CATGGGCATGTTCCTGCTGGGGCGGTGCGGTTTGGTCCCAACTCTGCTAAGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp CCCAGACCAGACATGCAGCATCCACATGCAGGAAGAGCTACACAGGCTGGGGCAACCACCAGCGCCTCGTaGGGCCCCACCGTGTGGCAA +
Preference number: 5 (lower is better)
Translates to: PRPDMQHPHAGRATQAGATTSAS*GPTVWQ
Trigger: TTGCCACACGGTGGGGCCCAACGAGGCGCTGGTGGT...TGCCCCAGCCTGTGTAGCTCTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp AATCTCTTCCTGCCGGATCTTCTGCTGTTCACGGGCCCCCTGCAGCTCATAGGCACCACCAGCGCCTCGTaGGGCCCCACCGTGTGGCAA +
Preference number: 5 (lower is better)
Translates to: NLFLPDLLLFTGPLQLIGTTSAS*GPTVWQ
Trigger: TTGCCACACGGTGGGGCCCAACGAGGCGCTGGTGGT...GCCTATGAGCTGCAGGGGGCCCGTGAACAGCAGAAGATCCGGCAGGAAGAGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR CAA 90 bp CTGGGCCCTGCAGGTCATGGCTGCCCAGACCTAGAGGGGCAGCAGCAGGTGAGGTCCAGCATCTCCTTCTaGCACTCAGCTTCCCGGATG +
Preference number: 5 (lower is better)
Translates to: LGPAGHGCPDLEGQQQVRSSISF*HSASRM
Trigger: CATCCGGGAAGCTGAGTGCAAGAAGGAGATGCTGGA...CCTCACCTGCTGCTGCCCCTCTAGGTCTGGGCAGCCATGACCTGCAGGGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp CGTTCAGCCTCGGCCACGCCAATGTCAGCATCTCTCTGCACCACGGCAGTCTGCCGCTCAGCCTCTGCCTaGCCCATCGCCTCGATGACT +
Preference number: 5 (lower is better)
Translates to: RSASATPMSASLCTTAVCRSASA*PIASMT
Trigger: AGTCATCGAGGCGATGGGCAAGGCAGAGGCTGAGCG...GCAGACTGCCGTGGTGCAGAGAGATGCTGACATTGGCGTGGCCGAGGCTGAACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR CAA 90 bp ACGCAGCACTTCTGGTCCCTTCGAGATAAGGCACCAGAGTCAGTAACGTTCCCGCCCACCGTGTGGCAATaGCCCATGGCGCCGGCGGCA +
Preference number: 5 (lower is better)
Translates to: TQHFWSLRDKAPESVTFPPTVWQ*PMAPAA
Trigger: TGCCGCCGGCGCCATGGGCAATTGCCACACGGTGGG...CGGGAACGTTACTGACTCTGGTGCCTTATCTCGAAGGGACCAGAAGTGCTGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp CAGTGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCACCTCCCGCACCAGCTaGGCAAACTGGTCCCGGTCC +
Preference number: 5 (lower is better)
Translates to: QWGSATSKPQTRHAASTCTSRTS*ANWSRS
Trigger: GGACCGGGACCAGTTTGCCAAGCTGGTGCGGGAGGT...GCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp CATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTCCATTACCTCCCGCACCAGCTaGGCAAACTGGTCCCGGTCC +
Preference number: 5 (lower is better)
Translates to: HSQHPCQDAWVLGSSASITSRTS*ANWSRS
Trigger: GGACCGGGACCAGTTTGCCAAGCTGGTGCGGGAGGT...AATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp GCAGTGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGACCTCCCGCACCAGCTaGGCAAACTGGTCCCGGTCC +
Preference number: 5 (lower is better)
Translates to: AVGQCNIQAPDQTCSIHMTSRTS*ANWSRS
Trigger: GGACCGGGACCAGTTTGCCAAGCTGGTGCGGGAGGT...CATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp TCCCGGATGCCTGCGTCCCGTTCAGCCTCGGCCACGCCAATGTCAGCATCTCTCGTAGCGATGAGCTCCTaGTCCGTACGCAGGATCTCC +
Preference number: 5 (lower is better)
Translates to: SRMPASRSASATPMSASLVAMSS*SVRRIS
Trigger: GGAGATCCTGCGTACGGACAAGGAGCTCATCGCTAC...GAGAGATGCTGACATTGGCGTGGCCGAGGCTGAACGGGACGCAGGCATCCGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR CAA 90 bp CAGGGTATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCTAGTGGGGCAGCGATTTaGGCAGCAATCTGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: QGMSAGWGLGWMRGRTVSSGAAI*AAIWGR
Trigger: CCTGCCCCAGATTGCTGCCAAAATCGCTGCCCCACT...AGACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp AGGAGACAGAGGATTGGGTTGCTTCCCCATGGCTGGAACCCCATCACTCTGGCCCCCCTGCCAAGACGCTaGGGTCCTGGGCTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: RRQRIGLLPHGWNPITLAPLPRR*GPGLFC
Trigger: GCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGG...GGCCAGAGTGATGGGGTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCTCCT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp GGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTCCAGCATCTCCTTCTaGCACTCAGCTTCCCGGATG +
Preference number: 5 (lower is better)
Translates to: GELGPLDIHSTPAKTLGSSSISF*HSASRM
Trigger: CATCCGGGAAGCTGAGTGCAAGAAGGAGATGCTGGA...GGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp CGGCGCACTGTAGCGATGAGCTCCTTGTCCGTACGCAGGATCTCCTGTGCCTCCGTAGCGATGAGCTCCTaGTCCGTACGCAGGATCTCC +
Preference number: 5 (lower is better)
Translates to: RRTVAMSSLSVRRISCASVAMSS*SVRRIS
Trigger: GGAGATCCTGCGTACGGACAAGGAGCTCATCGCTAC...GGAGGCACAGGAGATCCTGCGTACGGACAAGGAGCTCATCGCTACAGTGCGCCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR CAA 90 bp ACAGGGTATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCTCCGCCTCCCCGATTTaGCGGATCTTCTCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: TGYERWLGPWVDEGKDSVSASPI*RIFSAS
Trigger: AGAGGCTGAGAAGATCCGCAAAATCGGGGAGGCGGA...GACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp GCAGTGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCGCTCAGCCTCTGCCTaGCCCATCGCCTCGATGACT +
Preference number: 5 (lower is better)
Translates to: AVGQCNIQAPDQTCSIHMRSASA*PIASMT
Trigger: AGTCATCGAGGCGATGGGCAAGGCAGAGGCTGAGCG...CATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp GGTCTGGCCAGGCTACAGCACTCGATTCTGTACAGGGTTGGCACAGCCTTGTCCCGCTCAGCCTCTGCCTaGCCCATCGCCTCGATGACT +
Preference number: 5 (lower is better)
Translates to: GLARLQHSILYRVGTALSRSASA*PIASMT
Trigger: AGTCATCGAGGCGATGGGCAAGGCAGAGGCTGAGCG...GGACAAGGCTGTGCCAACCCTGTACAGAATCGAGTGCTGTAGCCTGGCCAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp GGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCAGCACCAAGGCCATCTaGGCTGCATCCCCGTATTTC +
Preference number: 5 (lower is better)
Translates to: GELGPLDIHSTPAKTLGSSTKAI*AASPYF
Trigger: GAAATACGGGGATGCAGCCAAGATGGCCTTGGTGCT...GGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp GAGGATCTCAATGCCCATGCGGCCAACATCAGGGGCTGCCACCTCCCGCACCAGGCTCTTCTGCCTCCATaGGAGCAAGGAGACAGAGGA +
Preference number: 5 (lower is better)
Translates to: EDLNAHAANIRGCHLPHQALLPP*EQGDRG
Trigger: TCCTCTGTCTCCTTGCTCCAATGGAGGCAGAAGAGC...CTGGTGCGGGAGGTGGCAGCCCCTGATGTTGGCCGCATGGGCATTGAGATCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580805.5
CDS-3UTR CAA 90 bp GGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAAGCCCCTGCCAAGACGCTaGGGTCCTGGGCTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: GSATSKPQTRHAASTCRKPLPRR*GPGLFC
Trigger: GCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGG...CTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp ACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAAGAGCTACACAACCACCAGCGCCTCGTaGGGCCCCACCGTGTGGCAA +
Preference number: 5 (lower is better)
Translates to: TSKPQTRHAASTCRKSYTTTSAS*GPTVWQ
Trigger: TTGCCACACGGTGGGGCCCAACGAGGCGCTGGTGGT...TGTGTAGCTCTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp CTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTGTAGCGATGAGCTCCTaGTCCGTACGCAGGATCTCC +
Preference number: 5 (lower is better)
Translates to: LDIHSTPAKTLGSWALLPVAMSS*SVRRIS
Trigger: GGAGATCCTGCGTACGGACAAGGAGCTCATCGCTAC...AGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp GGGTATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCTCTAGCACCAAGGCCATCTaGGCTGCATCCCCGTATTTC +
Preference number: 5 (lower is better)
Translates to: GYERWLGPWVDEGKDSVSSTKAI*AASPYF
Trigger: GAAATACGGGGATGCAGCCAAGATGGCCTTGGTGCT...AGAGACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp GCAGTGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGTGTAGACAGGAGGCCTaGCCTCTGTGCCCTTGGGGT +
Preference number: 5 (lower is better)
Translates to: AVGQCNIQAPDQTCSIHMCRQEA*PLCPWG
Trigger: ACCCCAAGGGCACAGAGGCAAGGCCTCCTGTCTACA...CATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp CAGTGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCTGTAGACAGGAGGCCTaGCCTCTGTGCCCTTGGGGT +
Preference number: 5 (lower is better)
Translates to: QWGSATSKPQTRHAASTCCRQEA*PLCPWG
Trigger: ACCCCAAGGGCACAGAGGCAAGGCCTCCTGTCTACA...GCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp GGGTATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCTCTGAAAACTTAGCAGAGTaGGGACCAAACCGCACCGCC +
Preference number: 5 (lower is better)
Translates to: GYERWLGPWVDEGKDSVSENLAE*GPNRTA
Trigger: GGCGGTGCGGTTTGGTCCCAACTCTGCTAAGTTTTC...AGAGACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp TGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAGGGTTGGCACAGCCTaGTCCACCAGAAGGGCCCAA +
Preference number: 5 (lower is better)
Translates to: WGSATSKPQTRHAASTCRRVGTA*STRRAQ
Trigger: TTGGGCCCTTCTGGTGGACAAGGCTGTGCCAACCCT...CCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp AGGAGACAGAGGATTGGGTTGCTTCCCCATGGCTGGAACCCCATCACTCTGGCCAGGGTTGGCACAGCCTaGTCCACCAGAAGGGCCCAA +
Preference number: 5 (lower is better)
Translates to: RRQRIGLLPHGWNPITLARVGTA*STRRAQ
Trigger: TTGGGCCCTTCTGGTGGACAAGGCTGTGCCAACCCT...GGCCAGAGTGATGGGGTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp GGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAAGGGTTGGCACAGCCTaGTCCACCAGAAGGGCCCAA +
Preference number: 5 (lower is better)
Translates to: GAVQHPSPRPDMQHPHAGRVGTA*STRRAQ
Trigger: TTGGGCCCTTCTGGTGGACAAGGCTGTGCCAACCCT...TCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp CAGGGTATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCTGCTCTTCTGCCTCCATaGGAGCAAGGAGACAGAGGA +
Preference number: 5 (lower is better)
Translates to: QGMSAGWGLGWMRGRTVSALLPP*EQGDRG
Trigger: TCCTCTGTCTCCTTGCTCCAATGGAGGCAGAAGAGC...AGACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp TGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCGCTCTTCTGCCTCCATaGGAGCAAGGAGACAGAGGA +
Preference number: 5 (lower is better)
Translates to: WGAGTTGHSQHPCQDAWVALLPP*EQGDRG
Trigger: TCCTCTGTCTCCTTGCTCCAATGGAGGCAGAAGAGC...GACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp TGCAGCTCGAAGGCTCGCTTAGAGTCAGCAATCTTGGTGTCTGCCATGAACTTCACCACCAGCGCCTCGTaGGGCCCCACCGTGTGGCAA +
Preference number: 5 (lower is better)
Translates to: CSSKARLESAILVSAMNFTTSAS*GPTVWQ
Trigger: TTGCCACACGGTGGGGCCCAACGAGGCGCTGGTGGT...GAAGTTCATGGCAGACACCAAGATTGCTGACTCTAAGCGAGCCTTCGAGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR CAA 90 bp AGGGAGGATGGACAGATGCACAGAGAACTTCAAGGCACCAGGATTCTGAGGAGCACCTCCCGCACCAGCTaGGCAAACTGGTCCCGGTCC +
Preference number: 5 (lower is better)
Translates to: REDGQMHRELQGTRILRSTSRTS*ANWSRS
Trigger: GGACCGGGACCAGTTTGCCAAGCTGGTGCGGGAGGT...GCTCCTCAGAATCCTGGTGCCTTGAAGTTCTCTGTGCATCTGTCCATCCTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp ACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTCCATGTAGCGATGAGCTCCTaGTCCGTACGCAGGATCTCC +
Preference number: 5 (lower is better)
Translates to: TFTAPLPRRLGPGLFCLHVAMSS*SVRRIS
Trigger: GGAGATCCTGCGTACGGACAAGGAGCTCATCGCTAC...ATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp GGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAGTAGCGATGAGCTCCTaGTCCGTACGCAGGATCTCC +
Preference number: 5 (lower is better)
Translates to: GAVQHPSPRPDMQHPHAGVAMSS*SVRRIS
Trigger: GGAGATCCTGCGTACGGACAAGGAGCTCATCGCTAC...TCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp GTCCCGGTCCTGATAAATCTGCTCCACTGTCAGGGTCCCGAGGATGGAGCGCAGGAAAACTTAGCAGAGTaGGGACCAAACCGCACCGCC +
Preference number: 5 (lower is better)
Translates to: VPVLINLLHCQGPEDGAQENLAE*GPNRTA
Trigger: GGCGGTGCGGTTTGGTCCCAACTCTGCTAAGTTTTC...CTGCGCTCCATCCTCGGGACCCTGACAGTGGAGCAGATTTATCAGGACCGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580805.5
CDS-3UTR CAA 90 bp CTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTGAAAACTTAGCAGAGTaGGGACCAAACCGCACCGCC +
Preference number: 5 (lower is better)
Translates to: LDIHSTPAKTLGSWALLPENLAE*GPNRTA
Trigger: GGCGGTGCGGTTTGGTCCCAACTCTGCTAAGTTTTC...AGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS GCA 90 bp GTTAAAGCTACCCCCTCGGCCGTCTCTACGTCCTCGCAGCGGGGCTaGAACGTCATAATCTCTAGGGAAATCTGGCAGACTTGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: VKATPSAVSTSSQRG*NVIISREIWQTWQS
Trigger: GCTCTGCCAAGTCTGCCAGATTTCCCTAGAGATTATGACGTTGCAGCCCCGCTGCGAGGACGTAGAGACGGCCGAGGGGGTAGCTTTAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394906.6
CDS-3UTR CAA 90 bp TGCAGCTCGAAGGCTCGCTTAGAGTCAGCAATCTTGGTGTCTGCCATGAACTTCACCTCCCGCACCAGCTaGGCAAACTGGTCCCGGTCC +
Preference number: 5 (lower is better)
Translates to: CSSKARLESAILVSAMNFTSRTS*ANWSRS
Trigger: GGACCGGGACCAGTTTGCCAAGCTGGTGCGGGAGGT...GAAGTTCATGGCAGACACCAAGATTGCTGACTCTAAGCGAGCCTTCGAGCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR CAA 90 bp ACAGGGTATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCACGGCAATCTGTTTCTaGCGCTGCACAACCTCAATC +
Preference number: 5 (lower is better)
Translates to: TGYERWLGPWVDEGKDSVTAICF*RCTTSI
Trigger: GATTGAGGTTGTGCAGCGCAAGAAACAGATTGCCGT...GACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp CAGGGTATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCTACGGCAATCTGTTTCTaGCGCTGCACAACCTCAATC +
Preference number: 5 (lower is better)
Translates to: QGMSAGWGLGWMRGRTVSTAICF*RCTTSI
Trigger: GATTGAGGTTGTGCAGCGCAAGAAACAGATTGCCGT...AGACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp CAGTGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGCACCAAGGCCATCTaGGCTGCATCCCCGTATTTC +
Preference number: 5 (lower is better)
Translates to: QWGSATSKPQTRHAASTCSTKAI*AASPYF
Trigger: GAAATACGGGGATGCAGCCAAGATGGCCTTGGTGCT...GCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp CTAGACCCTCATCTCAGAAAACTTAGCAGAGTTGGGACCAAACCGCACCGCCCCAGTGGGGCAGCGATTTaGGCAGCAATCTGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: LDPHLRKLSRVGTKPHRPSGAAI*AAIWGR
Trigger: CCTGCCCCAGATTGCTGCCAAAATCGCTGCCCCACT...GGGGCGGTGCGGTTTGGTCCCAACTCTGCTAAGTTTTCTGAGATGAGGGTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp ATGAGCTCCTTGTCCGTACGCAGGATCTCCTGTGCCTCCACGGCAATCTGTTTCAGTGGGGCAGCGATTTaGGCAGCAATCTGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: MSSLSVRRISCASTAICFSGAAI*AAIWGR
Trigger: CCTGCCCCAGATTGCTGCCAAAATCGCTGCCCCACT...GAAACAGATTGCCGTGGAGGCACAGGAGATCCTGCGTACGGACAAGGAGCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR CAA 90 bp GGGTATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCTCTACACCAGTGGCCTTCTaGATCAGGGGTATCTTAGAC +
Preference number: 5 (lower is better)
Translates to: GYERWLGPWVDEGKDSVSTPVAF*IRGILD
Trigger: GTCTAAGATACCCCTGATCAAGAAGGCCACTGGTGT...AGAGACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp ACGCAGCACTTCTGGTCCCTTCGAGATAAGGCACCAGAGTCAGTAACGTTCCCGTGTAGACAGGAGGCCTaGCCTCTGTGCCCTTGGGGT +
Preference number: 5 (lower is better)
Translates to: TQHFWSLRDKAPESVTFPCRQEA*PLCPWG
Trigger: ACCCCAAGGGCACAGAGGCAAGGCCTCCTGTCTACA...CGGGAACGTTACTGACTCTGGTGCCTTATCTCGAAGGGACCAGAAGTGCTGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp CGGCAGTCTGCGTCTTGCCCAGGGAGCTCAGATAGTCCACTTTGTCATACACGTAGGGTTGGCACAGCCTaGTCCACCAGAAGGGCCCAA +
Preference number: 5 (lower is better)
Translates to: RQSASCPGSSDSPLCHTRRVGTA*STRRAQ
Trigger: TTGGGCCCTTCTGGTGGACAAGGCTGTGCCAACCCT...ACGTGTATGACAAAGTGGACTATCTGAGCTCCCTGGGCAAGACGCAGACTGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580805.5
CDS-3UTR CAA 90 bp ACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTCCATAGACAGAGGATTGGGTaGCTTCCCCATGGCTGGAAC +
Preference number: 5 (lower is better)
Translates to: TFTAPLPRRLGPGLFCLHRQRIG*LPHGWN
Trigger: GTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCT...ATGGAGGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp GATGGCACAAGGGCTCTGGGGTCTGGCCAGGCTACAGCACTCGATTCTGTACAGAGACAGAGGATTGGGTaGCTTCCCCATGGCTGGAAC +
Preference number: 5 (lower is better)
Translates to: DGTRALGSGQATALDSVQRQRIG*LPHGWN
Trigger: GTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCT...CTGTACAGAATCGAGTGCTGTAGCCTGGCCAGACCCCAGAGCCCTTGTGCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp ACAGGGTATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCTTGTCATACACGTCCTaGATGGTGAAGCTGAGGATC +
Preference number: 5 (lower is better)
Translates to: TGYERWLGPWVDEGKDSVLSYTS*MVKLRI
Trigger: GATCCTCAGCTTCACCATCAAGGACGTGTATGACAA...GACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp GGGTGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGTTAGAGTCAGCAATCTaGGTGTCTGCCATGAACTTC +
Preference number: 5 (lower is better)
Translates to: GWGAGTTGHSQHPCQDAWLESAI*VSAMNF
Trigger: GAAGTTCATGGCAGACACCAAGATTGCTGACTCTAA...CCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp ACGCAGCACTTCTGGTCCCTTCGAGATAAGGCACCAGAGTCAGTAACGTTCCCGTCCGCCTCCCCGATTTaGCGGATCTTCTCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: TQHFWSLRDKAPESVTFPSASPI*RIFSAS
Trigger: AGAGGCTGAGAAGATCCGCAAAATCGGGGAGGCGGA...CGGGAACGTTACTGACTCTGGTGCCTTATCTCGAAGGGACCAGAAGTGCTGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp GCCTCCATTGGAGCAAGGAGACAGAGGATTGGGTTGCTTCCCCATGGCTGGAACAGCACCAAGGCCATCTaGGCTGCATCCCCGTATTTC +
Preference number: 5 (lower is better)
Translates to: ASIGARRQRIGLLPHGWNSTKAI*AASPYF
Trigger: GAAATACGGGGATGCAGCCAAGATGGCCTTGGTGCT...GTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCTCCTTGCTCCAATGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp TGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAAGAGCTAAGTGGGGCAGCGATTTaGGCAGCAATCTGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: CNIQAPDQTCSIHMQEELSGAAI*AAIWGR
Trigger: CCTGCCCCAGATTGCTGCCAAAATCGCTGCCCCACT...TAGCTCTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp ACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCGATGTGACCTTACTGTaGTCTCCACTGAGGACCACA +
Preference number: 5 (lower is better)
Translates to: TGHSQHPCQDAWVLGSSADVTLL*SPLRTT
Trigger: TGTGGTCCTCAGTGGAGACAACAGTAAGGTCACATC...GGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp GAGGATGGACAGATGCACAGAGAACTTCAAGGCACCAGGATTCTGAGGAGCAGCTGTAGACAGGAGGCCTaGCCTCTGTGCCCTTGGGGT +
Preference number: 5 (lower is better)
Translates to: EDGQMHRELQGTRILRSSCRQEA*PLCPWG
Trigger: ACCCCAAGGGCACAGAGGCAAGGCCTCCTGTCTACA...GCTGCTCCTCAGAATCCTGGTGCCTTGAAGTTCTCTGTGCATCTGTCCATCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp ACACGCAGGGAGATGAGACACAAACCTGATGAAAGTGGCAGTGAAAGTGGGGTACCCCTGCCAAGACGCTaGGGTCCTGGGCTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: TRREMRHKPDESGSESGVPLPRR*GPGLFC
Trigger: GCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGG...TACCCCACTTTCACTGCCACTTTCATCAGGTTTGTGTCTCATCTCCCTGCGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS TCA 90 bp GGATGGAGCGCAGATGTCCCTCCAGGGTCTGCAGGACGACGTTTTTaGTGTCCTGCACATTCTTACCCAGAAACTGCTCACAAGCCACGG +
Preference number: 5 (lower is better)
Translates to: GWSADVPPGSAGRRF*CPAHSYPETAHKPR
Trigger: CCGTGGCTTGTGAGCAGTTTCTGGGTAAGAATGTGCAGGACATCAAAAACGTCGTCCTGCAGACCCTGGAGGGACATCTGCGCTCCATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000577789.5
ENST00000580313.5
ENST00000580805.5
ENST00000581509.1
ENST00000582174.5
ENST00000585169.5
CDS GCA 90 bp GGCAGACTTGGCAGAGCTTCCAGAATCCCTTGCTGTTTCCCCACTTaGAGTCCAATAGGCAAGGGCAAGGGACCTGTGCAACCCCTGTTA +
Preference number: 5 (lower is better)
Translates to: GRLGRASRIPCCFPT*SPIGKGKGPVQPLL
Trigger: TAACAGGGGTTGCACAGGTCCCTTGCCCTTGCCTATTGGACTGCAAGTGGGGAAACAGCAAGGGATTCTGGAAGCTCTGCCAAGTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394906.6
CDS GCA 90 bp CGCAGATGTCCCTCCAGGGTCTGCAGGACGACGTTTTTGATGTCCTaGACATTCTTACCCAGAAACTGCTCACAAGCCACGGCCAGGAGT +
Preference number: 5 (lower is better)
Translates to: RRCPSRVCRTTFLMS*TFLPRNCSQATARS
Trigger: ACTCCTGGCCGTGGCTTGTGAGCAGTTTCTGGGTAAGAATGTGCAGGACATCAAAAACGTCGTCCTGCAGACCCTGGAGGGACATCTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000577789.5
ENST00000580313.5
ENST00000580805.5
ENST00000581509.1
ENST00000582174.5
ENST00000585169.5
CDS GCA 90 bp AACAGGGCCTCACCGAGGATGGAGCGCAGATGTCCCTCCAGGGTCTaGAGGACGACGTTTTTGATGTCCTGCACATTCTTACCCAGAAAC +
Preference number: 5 (lower is better)
Translates to: NRASPRMERRCPSRV*RTTFLMSCTFLPRN
Trigger: GTTTCTGGGTAAGAATGTGCAGGACATCAAAAACGTCGTCCTGCAGACCCTGGAGGGACATCTGCGCTCCATCCTCGGTGAGGCCCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581509.1
ENST00000582174.5
CDS-3UTR CAA 90 bp GGGTATGAGCGCTGGCTGGGGCCTTGGGTGGATGAGGGGAAGGACAGTGTCTCTTGCAGGACGACGTTTTaGATGTCCTGCACATTCTTA +
Preference number: 5 (lower is better)
Translates to: GYERWLGPWVDEGKDSVSCRTTF*MSCTFL
Trigger: TAAGAATGTGCAGGACATCAAAAACGTCGTCCTGCA...AGAGACACTGTCCTTCCCCTCATCCACCCAAGGCCCCAGCCAGCGCTCATACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp GCCTCCATTGGAGCAAGGAGACAGAGGATTGGGTTGCTTCCCCATGGCTGGAACTGGGCCTCAGCTGTCTaGATGTTAACCTCCTCACTG +
Preference number: 5 (lower is better)
Translates to: ASIGARRQRIGLLPHGWNWASAV*MLTSSL
Trigger: CAGTGAGGAGGTTAACATCAAGACAGCTGAGGCCCA...GTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCTCCTTGCTCCAATGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp GCAGTGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGACACCAGTGGCCTTCTaGATCAGGGGTATCTTAGAC +
Preference number: 5 (lower is better)
Translates to: AVGQCNIQAPDQTCSIHMTPVAF*IRGILD
Trigger: GTCTAAGATACCCCTGATCAAGAAGGCCACTGGTGT...CATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp ACGCAGCACTTCTGGTCCCTTCGAGATAAGGCACCAGAGTCAGTAACGTTCCCGTTGCTGTTTCCCCACTaGCAGTCCAATAGGCAAGGG +
Preference number: 5 (lower is better)
Translates to: TQHFWSLRDKAPESVTFPLLFPH*QSNRQG
Trigger: CCCTTGCCTATTGGACTGCAAGTGGGGAAACAGCAA...CGGGAACGTTACTGACTCTGGTGCCTTATCTCGAAGGGACCAGAAGTGCTGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394906.6
CDS-3UTR CAA 90 bp AATCTCTTCCTGCCGGATCTTCTGCTGTTCACGGGCCCCCTGCAGCTCATAGGCTTGTCATACACGTCCTaGATGGTGAAGCTGAGGATC +
Preference number: 5 (lower is better)
Translates to: NLFLPDLLLFTGPLQLIGLSYTS*MVKLRI
Trigger: GATCCTCAGCTTCACCATCAAGGACGTGTATGACAA...GCCTATGAGCTGCAGGGGGCCCGTGAACAGCAGAAGATCCGGCAGGAAGAGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR CAA 90 bp ACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAAGAGCTACACATCCAGCATCTCCTTCTaGCACTCAGCTTCCCGGATG +
Preference number: 5 (lower is better)
Translates to: TSKPQTRHAASTCRKSYTSSISF*HSASRM
Trigger: CATCCGGGAAGCTGAGTGCAAGAAGGAGATGCTGGA...TGTGTAGCTCTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp GAGGATGGACAGATGCACAGAGAACTTCAAGGCACCAGGATTCTGAGGAGCAGCTCCAGCATCTCCTTCTaGCACTCAGCTTCCCGGATG +
Preference number: 5 (lower is better)
Translates to: EDGQMHRELQGTRILRSSSSISF*HSASRM
Trigger: CATCCGGGAAGCTGAGTGCAAGAAGGAGATGCTGGA...GCTGCTCCTCAGAATCCTGGTGCCTTGAAGTTCTCTGTGCATCTGTCCATCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp ACTGGACATTCACAGCACCCCTGCCAAGACGCTTGGGTCCTGGGCTCTTCTGCCTTAGAGTCAGCAATCTaGGTGTCTGCCATGAACTTC +
Preference number: 5 (lower is better)
Translates to: TGHSQHPCQDAWVLGSSALESAI*VSAMNF
Trigger: GAAGTTCATGGCAGACACCAAGATTGCTGACTCTAA...GGCAGAAGAGCCCAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp ACGCAGCACTTCTGGTCCCTTCGAGATAAGGCACCAGAGTCAGTAACGTTCCCGTGGGCCTCAGCTGTCTaGATGTTAACCTCCTCACTG +
Preference number: 5 (lower is better)
Translates to: TQHFWSLRDKAPESVTFPWASAV*MLTSSL
Trigger: CAGTGAGGAGGTTAACATCAAGACAGCTGAGGCCCA...CGGGAACGTTACTGACTCTGGTGCCTTATCTCGAAGGGACCAGAAGTGCTGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp GGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAAGACAATCTCATCGACCTaGGTAAGTGGGGCAGCGATT +
Preference number: 5 (lower is better)
Translates to: GSATSKPQTRHAASTCRKTISST*VSGAAI
Trigger: AATCGCTGCCCCACTTACCAAGGTCGATGAGATTGT...CTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp AAACTTAGCAGAGTTGGGACCAAACCGCACCGCCCCAGCAGGAACATGCCCATGACACCAGTGGCCTTCTaGATCAGGGGTATCTTAGAC +
Preference number: 5 (lower is better)
Translates to: KLSRVGTKPHRPSRNMPMTPVAF*IRGILD
Trigger: GTCTAAGATACCCCTGATCAAGAAGGCCACTGGTGT...CATGGGCATGTTCCTGCTGGGGCGGTGCGGTTTGGTCCCAACTCTGCTAAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp GTCCCGGTCCTGATAAATCTGCTCCACTGTCAGGGTCCCGAGGATGGAGCGCAGTCAGTAACGTTCCCGTaGTTCTGTGGGATTAAAACG +
Preference number: 5 (lower is better)
Translates to: VPVLINLLHCQGPEDGAQSVTFP*FCGIKT
Trigger: CGTTTTAATCCCACAGAACAACGGGAACGTTACTGA...CTGCGCTCCATCCTCGGGACCCTGACAGTGGAGCAGATTTATCAGGACCGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580805.5
CDS-3UTR CAA 90 bp GAGGATGGACAGATGCACAGAGAACTTCAAGGCACCAGGATTCTGAGGAGCAGCAGACAGAGGATTGGGTaGCTTCCCCATGGCTGGAAC +
Preference number: 5 (lower is better)
Translates to: EDGQMHRELQGTRILRSSRQRIG*LPHGWN
Trigger: GTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCT...GCTGCTCCTCAGAATCCTGGTGCCTTGAAGTTCTCTGTGCATCTGTCCATCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp TGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGTGCAGGACGACGTTTTaGATGTCCTGCACATTCTTA +
Preference number: 5 (lower is better)
Translates to: WGSATSKPQTRHAASTCRCRTTF*MSCTFL
Trigger: TAAGAATGTGCAGGACATCAAAAACGTCGTCCTGCA...CCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp GCCAACTGGGCCTCAGCTGTCTTGATGTTAACCTCCTCACTGAAGGCTGACTTTTCCAGCATCTCCTTCTaGCACTCAGCTTCCCGGATG +
Preference number: 5 (lower is better)
Translates to: ANWASAVLMLTSSLKADFSSISF*HSASRM
Trigger: CATCCGGGAAGCTGAGTGCAAGAAGGAGATGCTGGA...AAAGTCAGCCTTCAGTGAGGAGGTTAACATCAAGACAGCTGAGGCCCAGTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR CAA 90 bp TGGGGCAGTGCAACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGTTAGAGTCAGCAATCTaGGTGTCTGCCATGAACTTC +
Preference number: 5 (lower is better)
Translates to: WGSATSKPQTRHAASTCRLESAI*VSAMNF
Trigger: GAAGTTCATGGCAGACACCAAGATTGCTGACTCTAA...CCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGTTGCACTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp AATCTCTTCCTGCCGGATCTTCTGCTGTTCACGGGCCCCCTGCAGCTCATAGGCTTAGAGTCAGCAATCTaGGTGTCTGCCATGAACTTC +
Preference number: 5 (lower is better)
Translates to: NLFLPDLLLFTGPLQLIGLESAI*VSAMNF
Trigger: GAAGTTCATGGCAGACACCAAGATTGCTGACTCTAA...GCCTATGAGCTGCAGGGGGCCCGTGAACAGCAGAAGATCCGGCAGGAAGAGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR CAA 90 bp AGGGAGGATGGACAGATGCACAGAGAACTTCAAGGCACCAGGATTCTGAGGAGCTGGGCCTCAGCTGTCTaGATGTTAACCTCCTCACTG +
Preference number: 5 (lower is better)
Translates to: REDGQMHRELQGTRILRSWASAV*MLTSSL
Trigger: CAGTGAGGAGGTTAACATCAAGACAGCTGAGGCCCA...GCTCCTCAGAATCCTGGTGCCTTGAAGTTCTCTGTGCATCTGTCCATCCTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp CGGCAGTCTGCGTCTTGCCCAGGGAGCTCAGATAGTCCACTTTGTCATACACGTACGGCAATCTGTTTCTaGCGCTGCACAACCTCAATC +
Preference number: 5 (lower is better)
Translates to: RQSASCPGSSDSPLCHTRTAICF*RCTTSI
Trigger: GATTGAGGTTGTGCAGCGCAAGAAACAGATTGCCGT...ACGTGTATGACAAAGTGGACTATCTGAGCTCCCTGGGCAAGACGCAGACTGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR CAA 90 bp CGTCTTGCCCAGGGAGCTCAGATAGTCCACTTTGTCATACACGTCCTTGATGGTAGCACCAAGGCCATCTaGGCTGCATCCCCGTATTTC +
Preference number: 5 (lower is better)
Translates to: RLAQGAQIVHFVIHVLDGSTKAI*AASPYF
Trigger: GAAATACGGGGATGCAGCCAAGATGGCCTTGGTGCT...ACCATCAAGGACGTGTATGACAAAGTGGACTATCTGAGCTCCCTGGGCAAGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR CAA 90 bp ATGAGCTCCTTGTCCGTACGCAGGATCTCCTGTGCCTCCACGGCAATCTGTTTCACAATCTCATCGACCTaGGTAAGTGGGGCAGCGATT +
Preference number: 5 (lower is better)
Translates to: MSSLSVRRISCASTAICFTISST*VSGAAI
Trigger: AATCGCTGCCCCACTTACCAAGGTCGATGAGATTGT...GAAACAGATTGCCGTGGAGGCACAGGAGATCCTGCGTACGGACAAGGAGCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR CAA 90 bp ACGCAGCACTTCTGGTCCCTTCGAGATAAGGCACCAGAGTCAGTAACGTTCCCGACAATCTCATCGACCTaGGTAAGTGGGGCAGCGATT +
Preference number: 5 (lower is better)
Translates to: TQHFWSLRDKAPESVTFPTISST*VSGAAI
Trigger: AATCGCTGCCCCACTTACCAAGGTCGATGAGATTGT...CGGGAACGTTACTGACTCTGGTGCCTTATCTCGAAGGGACCAGAAGTGCTGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp CACAACCTCAATCTCAATCTCTTCCTGCCGGATCTTCTGCTGTTCACGGGCCCCGATGTGACCTTACTGTaGTCTCCACTGAGGACCACA +
Preference number: 5 (lower is better)
Translates to: HNLNLNLFLPDLLLFTGPDVTLL*SPLRTT
Trigger: TGTGGTCCTCAGTGGAGACAACAGTAAGGTCACATC...GGGGCCCGTGAACAGCAGAAGATCCGGCAGGAAGAGATTGAGATTGAGGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR CAA 90 bp AGACAGAGGATTGGGTTGCTTCCCCATGGCTGGAACCCCATCACTCTGGCCAGGTCAGTAACGTTCCCGTaGTTCTGTGGGATTAAAACG +
Preference number: 5 (lower is better)
Translates to: RQRIGLLPHGWNPITLARSVTFP*FCGIKT
Trigger: CGTTTTAATCCCACAGAACAACGGGAACGTTACTGA...CCTGGCCAGAGTGATGGGGTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp CCCAGACCAGACATGCAGCATCCACATGCAGGAAGAGCTACACAGGCTGGGGCATCAGTAACGTTCCCGTaGTTCTGTGGGATTAAAACG +
Preference number: 5 (lower is better)
Translates to: PRPDMQHPHAGRATQAGASVTFP*FCGIKT
Trigger: CGTTTTAATCCCACAGAACAACGGGAACGTTACTGA...TGCCCCAGCCTGTGTAGCTCTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS TCA 90 bp TCTCAACAGCACTTAACACCGAGCTTCCTGCTGCACAGTCCAGGCTaGATGAGGAAAAGTGTCCCAAGCAGCACTAGGTTCCTGAGCAGA +
Preference number: 5 (lower is better)
Translates to: SQQHLTPSFLLHSPG*MRKSVPSSTRFLSR
Trigger: TCTGCTCAGGAACCTAGTGCTGCTTGGGACACTTTTCCTCATTCAGCCTGGACTGTGCAGCAGGAAGCTCGGTGTTAAGTGCTGTTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582174.5
CDS-3UTR CAA 90 bp AGGGAGGATGGACAGATGCACAGAGAACTTCAAGGCACCAGGATTCTGAGGAGCACAATCTCATCGACCTaGGTAAGTGGGGCAGCGATT +
Preference number: 5 (lower is better)
Translates to: REDGQMHRELQGTRILRSTISST*VSGAAI
Trigger: AATCGCTGCCCCACTTACCAAGGTCGATGAGATTGT...GCTCCTCAGAATCCTGGTGCCTTGAAGTTCTCTGTGCATCTGTCCATCCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp ACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAAGAGCTACACAGATGTGACCTTACTGTaGTCTCCACTGAGGACCACA +
Preference number: 5 (lower is better)
Translates to: TSKPQTRHAASTCRKSYTDVTLL*SPLRTT
Trigger: TGTGGTCCTCAGTGGAGACAACAGTAAGGTCACATC...TGTGTAGCTCTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp ACACGCAGGGAGATGAGACACAAACCTGATGAAAGTGGCAGTGAAAGTGGGGTAAGACAGAGGATTGGGTaGCTTCCCCATGGCTGGAAC +
Preference number: 5 (lower is better)
Translates to: TRREMRHKPDESGSESGVRQRIG*LPHGWN
Trigger: GTTCCAGCCATGGGGAAGCAACCCAATCCTCTGTCT...TACCCCACTTTCACTGCCACTTTCATCAGGTTTGTGTCTCATCTCCCTGCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS GCA 90 bp TGCAGGACGACGTTTTTGATGTCCTGCACATTCTTACCCAGAAACTaGTCACAAGCCACGGCCAGGAGTTCCTTCTCCGTCATGATCTTC +
Preference number: 5 (lower is better)
Translates to: CRTTFLMSCTFLPRN*SQATARSSFSVMIF
Trigger: GAAGATCATGACGGAGAAGGAACTCCTGGCCGTGGCTTGTGAGCAGTTTCTGGGTAAGAATGTGCAGGACATCAAAAACGTCGTCCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000577789.5
ENST00000580313.5
ENST00000580805.5
ENST00000581509.1
ENST00000582174.5
ENST00000585169.5
CDS-3UTR CAA 90 bp GAGGATGGACAGATGCACAGAGAACTTCAAGGCACCAGGATTCTGAGGAGCAGCTTGTCATACACGTCCTaGATGGTGAAGCTGAGGATC +
Preference number: 5 (lower is better)
Translates to: EDGQMHRELQGTRILRSSLSYTS*MVKLRI
Trigger: GATCCTCAGCTTCACCATCAAGGACGTGTATGACAA...GCTGCTCCTCAGAATCCTGGTGCCTTGAAGTTCTCTGTGCATCTGTCCATCCTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp AAGGCTGACTTTTGCAGCTCGAAGGCTCGCTTAGAGTCAGCAATCTTGGTGTCTTGGGCCTCAGCTGTCTaGATGTTAACCTCCTCACTG +
Preference number: 5 (lower is better)
Translates to: KADFCSSKARLESAILVSWASAV*MLTSSL
Trigger: CAGTGAGGAGGTTAACATCAAGACAGCTGAGGCCCA...AGACACCAAGATTGCTGACTCTAAGCGAGCCTTCGAGCTGCAAAAGTCAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR CAA 90 bp GTGATTGTAATAAACATCTTCAGCTTAATCTACATGATGTGCATGGGGGAAAGAACCACCAGCGCCTCGTaGGGCCCCACCGTGTGGCAA +
Preference number: 5 (lower is better)
Translates to: VIVINIFSLIYMMCMGERTTSAS*GPTVWQ
Trigger: TTGCCACACGGTGGGGCCCAACGAGGCGCTGGTGGT...TCTTTCCCCCATGCACATCATGTAGATTAAGCTGAAGATGTTTATTACAATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp AGGGAGGATGGACAGATGCACAGAGAACTTCAAGGCACCAGGATTCTGAGGAGCTGCAGGACGACGTTTTaGATGTCCTGCACATTCTTA +
Preference number: 5 (lower is better)
Translates to: REDGQMHRELQGTRILRSCRTTF*MSCTFL
Trigger: TAAGAATGTGCAGGACATCAAAAACGTCGTCCTGCA...GCTCCTCAGAATCCTGGTGCCTTGAAGTTCTCTGTGCATCTGTCCATCCTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp ACATCCAAGCCCCAGACCAGACATGCAGCATCCACATGCAGGAAGAGCTACACATGCAGGACGACGTTTTaGATGTCCTGCACATTCTTA +
Preference number: 5 (lower is better)
Translates to: TSKPQTRHAASTCRKSYTCRTTF*MSCTFL
Trigger: TAAGAATGTGCAGGACATCAAAAACGTCGTCCTGCA...TGTGTAGCTCTTCCTGCATGTGGATGCTGCATGTCTGGTCTGGGGCTTGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp AGGGAGGATGGACAGATGCACAGAGAACTTCAAGGCACCAGGATTCTGAGGAGCTTAGAGTCAGCAATCTaGGTGTCTGCCATGAACTTC +
Preference number: 5 (lower is better)
Translates to: REDGQMHRELQGTRILRSLESAI*VSAMNF
Trigger: GAAGTTCATGGCAGACACCAAGATTGCTGACTCTAA...GCTCCTCAGAATCCTGGTGCCTTGAAGTTCTCTGTGCATCTGTCCATCCTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp AAGGCTGACTTTTGCAGCTCGAAGGCTCGCTTAGAGTCAGCAATCTTGGTGTCTACGGCAATCTGTTTCTaGCGCTGCACAACCTCAATC +
Preference number: 5 (lower is better)
Translates to: KADFCSSKARLESAILVSTAICF*RCTTSI
Trigger: GATTGAGGTTGTGCAGCGCAAGAAACAGATTGCCGT...AGACACCAAGATTGCTGACTCTAAGCGAGCCTTCGAGCTGCAAAAGTCAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR CAA 90 bp TTGCGCTGCACAACCTCAATCTCAATCTCTTCCTGCCGGATCTTCTGCTGTTCAGATGTGACCTTACTGTaGTCTCCACTGAGGACCACA +
Preference number: 5 (lower is better)
Translates to: LRCTTSISISSCRIFCCSDVTLL*SPLRTT
Trigger: TGTGGTCCTCAGTGGAGACAACAGTAAGGTCACATC...TGAACAGCAGAAGATCCGGCAGGAAGAGATTGAGATTGAGGTTGTGCAGCGCAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR CAA 90 bp ACACGCAGGGAGATGAGACACAAACCTGATGAAAGTGGCAGTGAAAGTGGGGTATTGTCATACACGTCCTaGATGGTGAAGCTGAGGATC +
Preference number: 5 (lower is better)
Translates to: TRREMRHKPDESGSESGVLSYTS*MVKLRI
Trigger: GATCCTCAGCTTCACCATCAAGGACGTGTATGACAA...TACCCCACTTTCACTGCCACTTTCATCAGGTTTGTGTCTCATCTCCCTGCGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp GAAGGCTCGCTTAGAGTCAGCAATCTTGGTGTCTGCCATGAACTTCACATCCAGTTGTCATACACGTCCTaGATGGTGAAGCTGAGGATC +
Preference number: 5 (lower is better)
Translates to: EGSLRVSNLGVCHELHIQLSYTS*MVKLRI
Trigger: GATCCTCAGCTTCACCATCAAGGACGTGTATGACAA...CTGGATGTGAAGTTCATGGCAGACACCAAGATTGCTGACTCTAAGCGAGCCTTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR CAA 90 bp TGTGACCTTACTGTTGTCTCCACTGAGGACCACAATCTCATCGACCTTGGTAAGACAATCTCATCGACCTaGGTAAGTGGGGCAGCGATT +
Preference number: 5 (lower is better)
Translates to: CDLTVVSTEDHNLIDLGKTISST*VSGAAI
Trigger: AATCGCTGCCCCACTTACCAAGGTCGATGAGATTGT...CTTACCAAGGTCGATGAGATTGTGGTCCTCAGTGGAGACAACAGTAAGGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580805.5
ENST00000586827.6
CDS-3UTR CAA 90 bp ACAGAGAGTGATTGTAATAAACATCTTCAGCTTAATCTACATGATGTGCATGGGCGCTCAGCCTCTGCCTaGCCCATCGCCTCGATGACT +
Preference number: 5 (lower is better)
Translates to: TESDCNKHLQLNLHDVHGRSASA*PIASMT
Trigger: AGTCATCGAGGCGATGGGCAAGGCAGAGGCTGAGCG...CCCATGCACATCATGTAGATTAAGCTGAAGATGTTTATTACAATCACTCTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp GAGAGTGATTGTAATAAACATCTTCAGCTTAATCTACATGATGTGCATGGGGGAAGTGGGGCAGCGATTTaGGCAGCAATCTGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: ESDCNKHLQLNLHDVHGGSGAAI*AAIWGR
Trigger: CCTGCCCCAGATTGCTGCCAAAATCGCTGCCCCACT...TCCCCCATGCACATCATGTAGATTAAGCTGAAGATGTTTATTACAATCACTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp GAGAGTGATTGTAATAAACATCTTCAGCTTAATCTACATGATGTGCATGGGGGAGCTCTTCTGCCTCCATaGGAGCAAGGAGACAGAGGA +
Preference number: 5 (lower is better)
Translates to: ESDCNKHLQLNLHDVHGGALLPP*EQGDRG
Trigger: TCCTCTGTCTCCTTGCTCCAATGGAGGCAGAAGAGC...TCCCCCATGCACATCATGTAGATTAAGCTGAAGATGTTTATTACAATCACTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp GTGATTGTAATAAACATCTTCAGCTTAATCTACATGATGTGCATGGGGGAAAGAGAAAACTTAGCAGAGTaGGGACCAAACCGCACCGCC +
Preference number: 5 (lower is better)
Translates to: VIVINIFSLIYMMCMGERENLAE*GPNRTA
Trigger: GGCGGTGCGGTTTGGTCCCAACTCTGCTAAGTTTTC...TCTTTCCCCCATGCACATCATGTAGATTAAGCTGAAGATGTTTATTACAATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp GTGATTGTAATAAACATCTTCAGCTTAATCTACATGATGTGCATGGGGGAAAGAAGCTTCCAGAATCCCTaGCTGTTTCCCCACTTGCAG +
Preference number: 5 (lower is better)
Translates to: VIVINIFSLIYMMCMGERSFQNP*LFPHLQ
Trigger: CTGCAAGTGGGGAAACAGCAAGGGATTCTGGAAGCT...TCTTTCCCCCATGCACATCATGTAGATTAAGCTGAAGATGTTTATTACAATCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394906.6
CDS-3UTR CAA 90 bp GAGAGTGATTGTAATAAACATCTTCAGCTTAATCTACATGATGTGCATGGGGGAGATGTGACCTTACTGTaGTCTCCACTGAGGACCACA +
Preference number: 5 (lower is better)
Translates to: ESDCNKHLQLNLHDVHGGDVTLL*SPLRTT
Trigger: TGTGGTCCTCAGTGGAGACAACAGTAAGGTCACATC...TCCCCCATGCACATCATGTAGATTAAGCTGAAGATGTTTATTACAATCACTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS-3UTR CAA 90 bp GTGATTGTAATAAACATCTTCAGCTTAATCTACATGATGTGCATGGGGGAAAGAACACCAGTGGCCTTCTaGATCAGGGGTATCTTAGAC +
Preference number: 5 (lower is better)
Translates to: VIVINIFSLIYMMCMGERTPVAF*IRGILD
Trigger: GTCTAAGATACCCCTGATCAAGAAGGCCACTGGTGT...TCTTTCCCCCATGCACATCATGTAGATTAAGCTGAAGATGTTTATTACAATCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000585169.5
CDS CCA 72 bp GCGCCTCGTTGGGCCCCACCGTGTGGCAATTGCCCATaGCGCCGGCGGCACGGAGGGCCCTCGGGACCGCAC +
Preference number: 6 (lower is better)
Translates to: APRWAPPCGNCP*RRRHGGPSGPH
Trigger: GTGCGGTCCCGAGGGCCCTCCGTGCCGCCGGCGCCATGGGCAATTGCCACACGGTGGGGCCCAACGAGGCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000577789.5
ENST00000580805.5
ENST00000582174.5
ENST00000585169.5
CDS GCA 72 bp CCACCAGCGCCTCGTTGGGCCCCACCGTGTGGCAATTaGCCATGGCGCCGGCGGCACGGAGGGCCCTCGGGA +
Preference number: 6 (lower is better)
Translates to: PPAPRWAPPCGN*PWRRRHGGPSG
Trigger: TCCCGAGGGCCCTCCGTGCCGCCGGCGCCATGGGCAATTGCCACACGGTGGGGCCCAACGAGGCGCTGGTGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000577789.5
ENST00000580805.5
ENST00000582174.5
ENST00000585169.5
CDS CAA 72 bp ACCACCAGCGCCTCGTTGGGCCCCACCGTGTGGCAATaGCCCATGGCGCCGGCGGCACGGAGGGCCCTCGGG +
Preference number: 6 (lower is better)
Translates to: TTSASLGPTVWQ*PMAPAARRALG
Trigger: CCCGAGGGCCCTCCGTGCCGCCGGCGCCATGGGCAATTGCCACACGGTGGGGCCCAACGAGGCGCTGGTGGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000577789.5
ENST00000580805.5
ENST00000582174.5
ENST00000585169.5
CDS CAA 90 bp CCCCCTGAAACCACCAGCGCCTCGTTGGGCCCCACCGTGTGGCAATaGCCCATGGCGCCGGCGGCACGGAGGGCCCTCGGGACCGCACAG +
Preference number: 6 (lower is better)
Translates to: PPETTSASLGPTVWQ*PMAPAARRALGTAQ
Trigger: CTGTGCGGTCCCGAGGGCCCTCCGTGCCGCCGGCGCCATGGGCAATTGCCACACGGTGGGGCCCAACGAGGCGCTGGTGGTTTCAGGGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000582174.5
ENST00000585169.5
CDS CCA 72 bp CCTGAAACCACCAGCGCCTCGTTGGGCCCCACCGTGTaGCAATTGCCCATGGCGCCGGCGGCACGGAGGGCC +
Preference number: 6 (lower is better)
Translates to: PETTSASLGPTV*QLPMAPAARRA
Trigger: GGCCCTCCGTGCCGCCGGCGCCATGGGCAATTGCCACACGGTGGGGCCCAACGAGGCGCTGGTGGTTTCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000582174.5
ENST00000585169.5
CDS CAA 90 bp CAGTCTGAAACCACCAGCGCCTCGTTGGGCCCCACCGTGTGGCAATaGCCCATGGCGCCGGCGGCACGGAGGGCCCTCGGGACCGCACAG +
Preference number: 6 (lower is better)
Translates to: QSETTSASLGPTVWQ*PMAPAARRALGTAQ
Trigger: CTGTGCGGTCCCGAGGGCCCTCCGTGCCGCCGGCGCCATGGGCAATTGCCACACGGTGGGGCCCAACGAGGCGCTGGTGGTTTCAGACTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577789.5
CDS CCA 72 bp TCTGAAACCACCAGCGCCTCGTTGGGCCCCACCGTGTaGCAATTGCCCATGGCGCCGGCGGCACGGAGGGCC +
Preference number: 6 (lower is better)
Translates to: SETTSASLGPTV*QLPMAPAARRA
Trigger: GGCCCTCCGTGCCGCCGGCGCCATGGGCAATTGCCACACGGTGGGGCCCAACGAGGCGCTGGTGGTTTCAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577789.5
CDS CCA 72 bp TCGCCGCCCCCTCACCTGAAACCACCAGCGCCTCGTTaGGCCCCACCGTGTGGCAATTGCCCATGGCGCCGG +
Preference number: 6 (lower is better)
Translates to: SPPPHLKPPAPR*APPCGNCPWRR
Trigger: CCGGCGCCATGGGCAATTGCCACACGGTGGGGCCCAACGAGGCGCTGGTGGTTTCAGGTGAGGGGGCGGCGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593158.1
CDS CCA 72 bp CTGGGCGGCTCTCACTTTTCACCCTCGGCAATCTGCTaGATGCGGTGGGCCTCGGCCTCGGCAGGCCGGCGC +
Preference number: 6 (lower is better)
Translates to: LGGSHFSPSAIC*MRWASASAGRR
Trigger: GCGCCGGCCTGCCGAGGCCGAGGCCCACCGCATCCAGCAGATTGCCGAGGGTGAAAAGTGAGAGCCGCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593158.1
CDS CAA 72 bp CTCGCCGCCCCCTCACCTGAAACCACCAGCGCCTCGTaGGGCCCCACCGTGTGGCAATTGCCCATGGCGCCG +
Preference number: 6 (lower is better)
Translates to: LAAPSPETTSAS*GPTVWQLPMAP
Trigger: CGGCGCCATGGGCAATTGCCACACGGTGGGGCCCAACGAGGCGCTGGTGGTTTCAGGTGAGGGGGCGGCGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593158.1
CDS GCA 72 bp GCGGCTCTCACTTTTCACCCTCGGCAATCTGCTGGATaGGGTGGGCCTCGGCCTCGGCAGGCCGGCGCACTG +
Preference number: 6 (lower is better)
Translates to: AALTFHPRQSAG*GGPRPRQAGAL
Trigger: CAGTGCGCCGGCCTGCCGAGGCCGAGGCCCACCGCATCCAGCAGATTGCCGAGGGTGAAAAGTGAGAGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593158.1
CDS GCA 72 bp CACCTGGGCGGCTCTCACTTTTCACCCTCGGCAATCTaGTGGATGCGGTGGGCCTCGGCCTCGGCAGGCCGG +
Preference number: 6 (lower is better)
Translates to: HLGGSHFSPSAI*WMRWASASAGR
Trigger: CCGGCCTGCCGAGGCCGAGGCCCACCGCATCCAGCAGATTGCCGAGGGTGAAAAGTGAGAGCCGCCCAGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593158.1
CDS CCA 72 bp TCTCACTTTTCACCCTCGGCAATCTGCTGGATGCGGTaGGCCTCGGCCTCGGCAGGCCGGCGCACTGTAGCG +
Preference number: 6 (lower is better)
Translates to: SHFSPSAICWMR*ASASAGRRTVA
Trigger: CGCTACAGTGCGCCGGCCTGCCGAGGCCGAGGCCCACCGCATCCAGCAGATTGCCGAGGGTGAAAAGTGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593158.1
CDS CAA 72 bp GAACCACAACAGCCCCCTGAAACCACCAGCGCCTCGTaGGGCCCCACCGTGTGGCAATTGCCCATGGCGCCG +
Preference number: 6 (lower is better)
Translates to: EPQQPPETTSAS*GPTVWQLPMAP
Trigger: CGGCGCCATGGGCAATTGCCACACGGTGGGGCCCAACGAGGCGCTGGTGGTTTCAGGGGGCTGTTGTGGTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000580805.5
ENST00000582174.5
ENST00000585169.5
ENST00000586827.6
CDS GCA 72 bp ACCCCCTCGGCCGTCTCTACGTCCTCGCAGCGGGGCTaGAACGTCATAATCTCTAGGGAAATCTGGCAGACT +
Preference number: 6 (lower is better)
Translates to: TPSAVSTSSQRG*NVIISREIWQT
Trigger: AGTCTGCCAGATTTCCCTAGAGATTATGACGTTGCAGCCCCGCTGCGAGGACGTAGAGACGGCCGAGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394906.6
CDS GCA 72 bp ACCCCCTCGGCCGTCTCTACGTCCTCGCAGCGGGGCTaGAACGTCATAATCTCTAGGGAAATCCTGTGCAAC +
Preference number: 6 (lower is better)
Translates to: TPSAVSTSSQRG*NVIISREILCN
Trigger: GTTGCACAGGATTTCCCTAGAGATTATGACGTTGCAGCCCCGCTGCGAGGACGTAGAGACGGCCGAGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000580313.5
ENST00000580805.5
CDS GCA 72 bp TGGGGAGCTGGGACCACTGGACATTCACAGCACCCCTaGCAAGACGCTTGGGTCCTTGATGGTGAAGCTGAG +
Preference number: 6 (lower is better)
Translates to: WGAGTTGHSQHP*QDAWVLDGEAE
Trigger: CTCAGCTTCACCATCAAGGACCCAAGCGTCTTGGCAGGGGTGCTGTGAATGTCCAGTGGTCCCAGCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584569.1
CDS CAA 90 bp TGGCAGACTTGGCAGAGCTTCCAGAATCCCTTGCTGTTTCCCCACTaGCAGTCCAATAGGCAAGGGCAAGGGACCTGTGCAACCCCTGTT +
Preference number: 6 (lower is better)
Translates to: WQTWQSFQNPLLFPH*QSNRQGQGTCATPV
Trigger: AACAGGGGTTGCACAGGTCCCTTGCCCTTGCCTATTGGACTGCAAGTGGGGAAACAGCAAGGGATTCTGGAAGCTCTGCCAAGTCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394906.6
CDS CAA 90 bp AGGATGGAGCGCAGATGTCCCTCCAGGGTCTGCAGGACGACGTTTTaGATGTCCTGCACATTCTTACCCAGAAACTGCTCACAAGCCACG +
Preference number: 6 (lower is better)
Translates to: RMERRCPSRVCRTTF*MSCTFLPRNCSQAT
Trigger: CGTGGCTTGTGAGCAGTTTCTGGGTAAGAATGTGCAGGACATCAAAAACGTCGTCCTGCAGACCCTGGAGGGACATCTGCGCTCCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000577789.5
ENST00000580313.5
ENST00000580805.5
ENST00000581509.1
ENST00000582174.5
ENST00000585169.5
CDS GCA 72 bp CCCTCCAGGGTCTGCAGGACGACGTTTTTGATGTCCTaGACATTCTTACCCAGAAACTGCTCACAAGCCACG +
Preference number: 6 (lower is better)
Translates to: PSRVCRTTFLMS*TFLPRNCSQAT
Trigger: CGTGGCTTGTGAGCAGTTTCTGGGTAAGAATGTGCAGGACATCAAAAACGTCGTCCTGCAGACCCTGGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000577789.5
ENST00000580313.5
ENST00000580805.5
ENST00000581509.1
ENST00000582174.5
ENST00000585169.5
CDS GCA 72 bp TCACCGAGGATGGAGCGCAGATGTCCCTCCAGGGTCTaGAGGACGACGTTTTTGATGTCCTGCACATTCTTA +
Preference number: 6 (lower is better)
Translates to: SPRMERRCPSRV*RTTFLMSCTFL
Trigger: TAAGAATGTGCAGGACATCAAAAACGTCGTCCTGCAGACCCTGGAGGGACATCTGCGCTCCATCCTCGGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581509.1
ENST00000582174.5
CDS CAA 90 bp ATCTCTAGGGAAATCTGGCAGACTTGGCAGAGCTTCCAGAATCCCTaGCTGTTTCCCCACTTGCAGTCCAATAGGCAAGGGCAAGGGACC +
Preference number: 6 (lower is better)
Translates to: ISREIWQTWQSFQNP*LFPHLQSNRQGQGT
Trigger: GGTCCCTTGCCCTTGCCTATTGGACTGCAAGTGGGGAAACAGCAAGGGATTCTGGAAGCTCTGCCAAGTCTGCCAGATTTCCCTAGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394906.6
CDS TCA 72 bp GCAGATGTCCCTCCAGGGTCTGCAGGACGACGTTTTTaGTGTCCTGCACATTCTTACCCAGAAACTGCTCAC +
Preference number: 6 (lower is better)
Translates to: ADVPPGSAGRRF*CPAHSYPETAH
Trigger: GTGAGCAGTTTCTGGGTAAGAATGTGCAGGACATCAAAAACGTCGTCCTGCAGACCCTGGAGGGACATCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000577789.5
ENST00000580313.5
ENST00000580805.5
ENST00000581509.1
ENST00000582174.5
ENST00000585169.5
CDS TCA 72 bp CACTTAACACCGAGCTTCCTGCTGCACAGTCCAGGCTaGATGAGGAAAAGTGTCCCAAGCAGCACTAGGTTC +
Preference number: 6 (lower is better)
Translates to: HLTPSFLLHSPG*MRKSVPSSTRF
Trigger: GAACCTAGTGCTGCTTGGGACACTTTTCCTCATTCAGCCTGGACTGTGCAGCAGGAAGCTCGGTGTTAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582174.5
CDS CAA 72 bp CGCAGATGTCCCTCCAGGGTCTGCAGGACGACGTTTTaGATGTCCTGCACATTCTTACCCAGAAACTGCTCA +
Preference number: 6 (lower is better)
Translates to: RRCPSRVCRTTF*MSCTFLPRNCS
Trigger: TGAGCAGTTTCTGGGTAAGAATGTGCAGGACATCAAAAACGTCGTCCTGCAGACCCTGGAGGGACATCTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000577789.5
ENST00000580313.5
ENST00000580805.5
ENST00000581509.1
ENST00000582174.5
ENST00000585169.5
CDS GCA 72 bp ACGTTTTTGATGTCCTGCACATTCTTACCCAGAAACTaGTCACAAGCCACGGCCAGGAGTTCCTTCTCCGTC +
Preference number: 6 (lower is better)
Translates to: TFLMSCTFLPRN*SQATARSSFSV
Trigger: GACGGAGAAGGAACTCCTGGCCGTGGCTTGTGAGCAGTTTCTGGGTAAGAATGTGCAGGACATCAAAAACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000394906.6
ENST00000394908.9
ENST00000577789.5
ENST00000580313.5
ENST00000580805.5
ENST00000581509.1
ENST00000582174.5
ENST00000585169.5