RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FLOT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000137312, ENSG00000206379, ENSG00000206480, ENSG00000230143, ENSG00000232280, ENSG00000236271

Ensembl transcript IDs: ENST00000376389.8, ENST00000383382.8, ENST00000383562.8, ENST00000411778.5, ENST00000411848.1, ENST00000411944.5, ENST00000413165.5, ENST00000416018.5, ENST00000416389.5, ENST00000418160.5, ENST00000420604.1, ENST00000421565.5, ENST00000422636.5, ENST00000422714.5, ENST00000424683.5, ENST00000426417.5, ENST00000427701.1, ENST00000427784.5, ENST00000428438.1, ENST00000430384.5, ENST00000430843.5, ENST00000431913.5, ENST00000431966.5, ENST00000432428.5, ENST00000436025.1, ENST00000436197.5, ENST00000436822.6, ENST00000437093.5, ENST00000438134.5, ENST00000438162.5, ENST00000439376.5, ENST00000439396.5, ENST00000439743.1, ENST00000442932.5, ENST00000444068.5, ENST00000444497.5, ENST00000444632.6, ENST00000445319.5, ENST00000445383.5, ENST00000445669.5, ENST00000445853.5, ENST00000446072.5, ENST00000454249.5, ENST00000454773.5, ENST00000454845.1, ENST00000455034.5, ENST00000456042.5, ENST00000456844.1, ENST00000457133.5, ENST00000457733.5, ENST00000458306.1, ENST00000459887.5, ENST00000460694.5, ENST00000462145.1, ENST00000463265.1, ENST00000463435.5, ENST00000463572.5, ENST00000464837.5, ENST00000465796.1, ENST00000466680.5, ENST00000470163.5, ENST00000470643.5, ENST00000472990.1, ENST00000474138.1, ENST00000475936.5, ENST00000476576.5, ENST00000476729.5, ENST00000479358.1, ENST00000480605.1, ENST00000481740.1, ENST00000481843.5, ENST00000482241.1, ENST00000482255.1, ENST00000482522.5, ENST00000482675.5, ENST00000484168.1, ENST00000484693.1, ENST00000484797.5, ENST00000484899.1, ENST00000487376.5, ENST00000487385.5, ENST00000487549.1, ENST00000488811.1, ENST00000490802.5, ENST00000491057.5, ENST00000492441.5, ENST00000493620.5, ENST00000495886.1, ENST00000496175.5

Found 205 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGACCTGCCGCACCCCGTTaGTGCGGCAGACGCGACCCC +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGPAAPR*CGRRDP
Trigger: GGGGTCGCGTCTGCCGCAGCAACGGGGTGCGGCAGG...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR GCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGACCGCGTTCCCCACCCTaGCGCACCCCGTTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGPRSPP*RTPLLR
Trigger: CCGCAGCAACGGGGTGCGGCAGGGTGGGGAACGCGG...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR CCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGAGCGCTCCGCTTCCGCTaGCTTCCGCACCCGGGCCTC +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGALRFR*LPHPGL
Trigger: GAGGCCCGGGTGCGGAAGCCAGCGGAAGCGGAGCGC...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR GCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGCCTGCCGCACCCCGTTaGTGCGGCAGACGCGACCCC +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQPAAPR*CGRRDP
Trigger: GGGGTCGCGTCTGCCGCAGCAACGGGGTGCGGCAGG...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR CCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGCGCTCCGCTTCCGCTaGCTTCCGCACCCGGGCCTC +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQALRFR*LPHPGL
Trigger: GAGGCCCGGGTGCGGAAGCCAGCGGAAGCGGAGCGC...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR GCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCACCTGCCGCACCCCGTTaGTGCGGCAGACGCGACCCC +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSPAAPR*CGRRDP
Trigger: GGGGTCGCGTCTGCCGCAGCAACGGGGTGCGGCAGG...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR GCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCACCGCGTTCCCCACCCTaGCGCACCCCGTTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSPRSPP*RTPLLR
Trigger: CCGCAGCAACGGGGTGCGGCAGGGTGGGGAACGCGG...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR GCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGACTCCTGCTCCTGCACTaGCACCTGCTGGGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGLLLLH*HLLGPL
Trigger: GAGCGGGCCCAGCAGGTGGCAGTGCAGGAGCAGGAG...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR GCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGACGCCGGGCGATCTCCTaGTCCTGCACTGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGRRAIS*SCTATC
Trigger: GCAGGTGGCAGTGCAGGAGCAGGAGATCGCCCGGCG...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGAAGCTTTCCTGGGAGCTaGCCCCGCTCCCGCGTTCCC +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGSFPGS*PRSRVP
Trigger: GGGAACGCGGGAGCGGGGCCAGCTCCCAGGAAAGCT...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR CCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGAGCAGACCAGCTTTCCTaGGAGCTGGCCCCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGADQLS*ELAPLP
Trigger: CGGGAGCGGGGCCAGCTCCCAGGAAAGCTGGTCTGC...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR CCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGCGCTCCGCTTCCGCTaGCTTCCGCACCCGGGCCTC +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSALRFR*LPHPGL
Trigger: GAGGCCCGGGTGCGGAAGCCAGCGGAAGCGGAGCGC...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR GCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGAGGCCAGGTCAGCCTGTaGTCGGCGGGTGTTGACCTC +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGGQVSL*SAGVDL
Trigger: GAGGTCAACACCCGCCGAGCACAGGCTGACCTGGCC...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR GCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGCGCCGGGCGATCTCCTaGTCCTGCACTGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQRRAIS*SCTATC
Trigger: GCAGGTGGCAGTGCAGGAGCAGGAGATCGCCCGGCG...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGCAGACCAGCTTTCCTaGGAGCTGGCCCCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQADQLS*ELAPLP
Trigger: CGGGAGCGGGGCCAGCTCCCAGGAAAGCTGGTCTGC...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR CCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGAGGGCTCGGGCCCCTATaGCAAAGGCCTCAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGGLGPL*QRPQLP
Trigger: GGGAAGCTGAGGCCTTTGCCATAGGGGCCCGAGCCC...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR TCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGACAGTCATGTGGGCCATaGTGGCCCTCTGGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGQSCGP*WPSGGP
Trigger: AGGGCCACCAGAGGGCCATCATGGCCCACATGACTG...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR TCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGAGTGCTCGGCGGGTGTTaGCCTCGATGTCATAGGCGG +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGVLGGC*PRCHRR
Trigger: CCGCCTATGACATCGAGGTCAACACCCGCCGAGCAC...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR GCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCACTCCTGCTCCTGCACTaGCACCTGCTGGGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSLLLLH*HLLGPL
Trigger: GAGCGGGCCCAGCAGGTGGCAGTGCAGGAGCAGGAG...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR GCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCACGCCGGGCGATCTCCTaGTCCTGCACTGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSRRAIS*SCTATC
Trigger: GCAGGTGGCAGTGCAGGAGCAGGAGATCGCCCGGCG...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR GCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGAGCCTTCTTGGCCATCTaGTCAGCCTCGGCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGAFLAI*SASARA
Trigger: AGCCCGAGCCGAGGCTGAGCAGATGGCCAAGAAGGC...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR GCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGACCCAGTCACTTTGGCTaGCCCCATGGTCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGPSHFG*PHGPTA
Trigger: GGCAGTGGGACCATGGGGGCAGCCAAAGTGACTGGG...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAAGCTTTCCTGGGAGCTaGCCCCGCTCCCGCGTTCCC +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSSFPGS*PRSRVP
Trigger: GGGAACGCGGGAGCGGGGCCAGCTCCCAGGAAAGCT...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR CCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGCAGACCAGCTTTCCTaGGAGCTGGCCCCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSADQLS*ELAPLP
Trigger: CGGGAGCGGGGCCAGCTCCCAGGAAAGCTGGTCTGC...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR CCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGATCCAGCCACCATGACTaGGGGGCTTCGGCAGAACCC +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGSSHHD*GASAEP
Trigger: GGGTTCTGCCGAAGCCCCCCAGTCATGGTGGCTGGA...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR CCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGGGCTCGGGCCCCTATaGCAAAGGCCTCAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQGLGPL*QRPQLP
Trigger: GGGAAGCTGAGGCCTTTGCCATAGGGGCCCGAGCCC...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGACTTTGGCTGCCCCCATaGTCCCACTGCCGCTGGACA +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGLWLPP*SHCRWT
Trigger: TGTCCAGCGGCAGTGGGACCATGGGGGCAGCCAAAG...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR TCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGGCAATGCCAGTGACTaGGATGGGGACCCCATGGCG +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQGNASD*DGDPMA
Trigger: CGCCATGGGGTCCCCATCTCAGTCACTGGCATTGCC...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR TCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGACCTGGGCAATGCCAGTaGCTGAGATGGGGACCCCAT +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGPGQCQ*LRWGPH
Trigger: ATGGGGTCCCCATCTCAGTCACTGGCATTGCCCAGG...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR TCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGATTCCCCAGGAACATCTaGCAGGCGGCCGCCAACATC +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGFPRNI*QAAANI
Trigger: GATGTTGGCGGCCGCCTGTCAGATGTTCCTGGGGAA...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR TCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGCAGTCATGTGGGCCATaGTGGCCCTCTGGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQQSCGP*WPSGGP
Trigger: AGGGCCACCAGAGGGCCATCATGGCCCACATGACTG...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR TCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGTGCTCGGCGGGTGTTaGCCTCGATGTCATAGGCGG +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQVLGGC*PRCHRR
Trigger: CCGCCTATGACATCGAGGTCAACACCCGCCGAGCAC...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR GCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGCCAGGTCAGCCTGTaGTCGGCGGGTGTTGACCTC +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSGQVSL*SAGVDL
Trigger: GAGGTCAACACCCGCCGAGCACAGGCTGACCTGGCC...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR GCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGCCCAGTCACTTTGGCTaGCCCCATGGTCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQPSHFG*PHGPTA
Trigger: GGCAGTGGGACCATGGGGGCAGCCAAAGTGACTGGG...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGAAAACATGGTTCAGGCTaGAGCTTCCGGGACGCGGGC +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGKHGSG*SFRDAG
Trigger: GCCCGCGTCCCGGAAGCTCCAGCCTGAACCATGTTT...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR CCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGTCCAGCCACCATGACTaGGGGGCTTCGGCAGAACCC +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQSSHHD*GASAEP
Trigger: GGGTTCTGCCGAAGCCCCCCAGTCATGGTGGCTGGA...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR CCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGAGCCATGATGGCCCTCTaGTGGCCCTCTAACGTCTCC +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGAMMAL*WPSNVS
Trigger: GGAGACGTTAGAGGGCCACCAGAGGGCCATCATGGC...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGGCTCGGGCCCCTATaGCAAAGGCCTCAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSGLGPL*QRPQLP
Trigger: GGGAAGCTGAGGCCTTTGCCATAGGGGCCCGAGCCC...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGCTTTGGCTGCCCCCATaGTCCCACTGCCGCTGGACA +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQLWLPP*SHCRWT
Trigger: TGTCCAGCGGCAGTGGGACCATGGGGGCAGCCAAAG...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGACTTCCCCAGTCACTTTaGCTGCCCCCATGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGLPQSL*LPPWSH
Trigger: GTGGGACCATGGGGGCAGCCAAAGTGACTGGGGAAG...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR TCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGCAATGCCAGTGACTaGGATGGGGACCCCATGGCG +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSGNASD*DGDPMA
Trigger: CGCCATGGGGTCCCCATCTCAGTCACTGGCATTGCC...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR TCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGCCTGGGCAATGCCAGTaGCTGAGATGGGGACCCCAT +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQPGQCQ*LRWGPH
Trigger: ATGGGGTCCCCATCTCAGTCACTGGCATTGCCCAGG...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR TCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGTTCCCCAGGAACATCTaGCAGGCGGCCGCCAACATC +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQFPRNI*QAAANI
Trigger: GATGTTGGCGGCCGCCTGTCAGATGTTCCTGGGGAA...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR TCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCACAGTCATGTGGGCCATaGTGGCCCTCTGGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSQSCGP*WPSGGP
Trigger: AGGGCCACCAGAGGGCCATCATGGCCCACATGACTG...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR TCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGTGCTCGGCGGGTGTTaGCCTCGATGTCATAGGCGG +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSVLGGC*PRCHRR
Trigger: CCGCCTATGACATCGAGGTCAACACCCGCCGAGCAC...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR TCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGAAGCAGCATGTCCAGCTaGGCAGCCTCTTGGTACAGC +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGSSMSS*AASWYS
Trigger: GCTGTACCAAGAGGCTGCTCAGCTGGACATGCTGCT...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR TCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGAAAGTCAAGGGACCACTaGTCTCCTCTGCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGKSRDH*SPLPPG
Trigger: CCCAGGTGGCAGAGGAGATCAGTGGTCCCTTGACTT...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR GCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGCCTTCTTGGCCATCTaGTCAGCCTCGGCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSAFLAI*SASARA
Trigger: AGCCCGAGCCGAGGCTGAGCAGATGGCCAAGAAGGC...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR GCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGAACCACTGATCTCCTCTaGCACCTGGGGCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGTTDLL*HLGQLL
Trigger: GAGAAGCTGCCCCAGGTGGCAGAGGAGATCAGTGGT...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR GCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCACCCAGTCACTTTGGCTaGCCCCATGGTCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSPSHFG*PHGPTA
Trigger: GGCAGTGGGACCATGGGGGCAGCCAAAGTGACTGGG...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGAAACATGGTTCAGGCTaGAGCTTCCGGGACGCGGGC +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQKHGSG*SFRDAG
Trigger: GCCCGCGTCCCGGAAGCTCCAGCCTGAACCATGTTT...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR CCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGAACCCGGAGACCACCATaGCCTCATTTGGGCCACAAG +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGTRRPP*PHLGHK
Trigger: CTTGTGGCCCAAATGAGGCCATGGTGGTCTCCGGGT...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR CCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCATCCAGCCACCATGACTaGGGGGCTTCGGCAGAACCC +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSSSHHD*GASAEP
Trigger: GGGTTCTGCCGAAGCCCCCCAGTCATGGTGGCTGGA...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR CCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGAGTCTCCAGGGCAATGTaGGCAATCTCAGCCTCCGTC +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGVSRAM*AISASV
Trigger: GACGGAGGCTGAGATTGCCCACATTGCCCTGGAGAC...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGAATGATGGCCCTCTGGTaGCCCTCTAACGTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGMMALW*PSNVSR
Trigger: CCTGGAGACGTTAGAGGGCCACCAGAGGGCCATCAT...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGATCCTCCACAGTCATGTaGGCCATGATGGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGSSTVM*AMMALW
Trigger: CCAGAGGGCCATCATGGCCCACATGACTGTGGAGGA...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGAATCTCCTCTGCCACCTaGGGCAGCTTCTCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGISSAT*GSFSSS
Trigger: GCTGCTAGAGAAGCTGCCCCAGGTGGCAGAGGAGAT...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCACTTTGGCTGCCCCCATaGTCCCACTGCCGCTGGACA +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSLWLPP*SHCRWT
Trigger: TGTCCAGCGGCAGTGGGACCATGGGGGCAGCCAAAG...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGCTTCCCCAGTCACTTTaGCTGCCCCCATGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQLPQSL*LPPWSH
Trigger: GTGGGACCATGGGGGCAGCCAAAGTGACTGGGGAAG...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR TCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCACCTGGGCAATGCCAGTaGCTGAGATGGGGACCCCAT +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSPGQCQ*LRWGPH
Trigger: ATGGGGTCCCCATCTCAGTCACTGGCATTGCCCAGG...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR TCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCATTCCCCAGGAACATCTaGCAGGCGGCCGCCAACATC +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSFPRNI*QAAANI
Trigger: GATGTTGGCGGCCGCCTGTCAGATGTTCCTGGGGAA...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR TCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGAGCAGCATGTCCAGCTaGGCAGCCTCTTGGTACAGC +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQSSMSS*AASWYS
Trigger: GCTGTACCAAGAGGCTGCTCAGCTGGACATGCTGCT...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR TCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGAAGTCAAGGGACCACTaGTCTCCTCTGCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQKSRDH*SPLPPG
Trigger: CCCAGGTGGCAGAGGAGATCAGTGGTCCCTTGACTT...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR GCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGACGCTGCTCCTCAATCTaGTGCTTAGTCTTGGCCACC +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGRCSSI*CLVLAT
Trigger: GGTGGCCAAGACTAAGCAGCAGATTGAGGAGCAGCG...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR GCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGATGCACCTGCACCCGCTaGTCCTCAATCTGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGCTCTR*SSICCL
Trigger: TAAGCAGCAGATTGAGGAGCAGCGGGTGCAGGTGCA...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR GCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGACCACTGATCTCCTCTaGCACCTGGGGCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQTTDLL*HLGQLL
Trigger: GAGAAGCTGCCCCAGGTGGCAGAGGAGATCAGTGGT...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAAAACATGGTTCAGGCTaGAGCTTCCGGGACGCGGGC +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSKHGSG*SFRDAG
Trigger: GCCCGCGTCCCGGAAGCTCCAGCCTGAACCATGTTT...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR CCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGTCTCCAGGGCAATGTaGGCAATCTCAGCCTCCGTC +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQVSRAM*AISASV
Trigger: GACGGAGGCTGAGATTGCCCACATTGCCCTGGAGAC...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGATGATGGCCCTCTGGTaGCCCTCTAACGTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQMMALW*PSNVSR
Trigger: CCTGGAGACGTTAGAGGGCCACCAGAGGGCCATCAT...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGCCATGATGGCCCTCTaGTGGCCCTCTAACGTCTCC +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSAMMAL*WPSNVS
Trigger: GGAGACGTTAGAGGGCCACCAGAGGGCCATCATGGC...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGTCCTCCACAGTCATGTaGGCCATGATGGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQSSTVM*AMMALW
Trigger: CCAGAGGGCCATCATGGCCCACATGACTGTGGAGGA...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGATCTCCTCTGCCACCTaGGGCAGCTTCTCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQISSAT*GSFSSS
Trigger: GCTGCTAGAGAAGCTGCCCCAGGTGGCAGAGGAGAT...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCACTTCCCCAGTCACTTTaGCTGCCCCCATGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSLPQSL*LPPWSH
Trigger: GTGGGACCATGGGGGCAGCCAAAGTGACTGGGGAAG...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR TCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGAGCATCTTTTTGGACTTaGGCTGTTCGAGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGASFWT*AVRAFP
Trigger: GGGGAAGGCTCGAACAGCTCAAGTCCAAAAAGATGC...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR TCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAAGCAGCATGTCCAGCTaGGCAGCCTCTTGGTACAGC +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSSSMSS*AASWYS
Trigger: GCTGTACCAAGAGGCTGCTCAGCTGGACATGCTGCT...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR TCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAAAGTCAAGGGACCACTaGTCTCCTCTGCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSKSRDH*SPLPPG
Trigger: CCCAGGTGGCAGAGGAGATCAGTGGTCCCTTGACTT...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR TCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGAAGATGCTCACGCCTGTaGGTCTTTCCACACTCTCTG +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGRCSRL*VFPHSL
Trigger: CAGAGAGTGTGGAAAGACTCACAGGCGTGAGCATCT...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR GCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGCGCTGCTCCTCAATCTaGTGCTTAGTCTTGGCCACC +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQRCSSI*CLVLAT
Trigger: GGTGGCCAAGACTAAGCAGCAGATTGAGGAGCAGCG...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR GCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGTGCACCTGCACCCGCTaGTCCTCAATCTGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQCTCTR*SSICCL
Trigger: TAAGCAGCAGATTGAGGAGCAGCGGGTGCAGGTGCA...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR GCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAACCACTGATCTCCTCTaGCACCTGGGGCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSTTDLL*HLGQLL
Trigger: GAGAAGCTGCCCCAGGTGGCAGAGGAGATCAGTGGT...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAACCCGGAGACCACCATaGCCTCATTTGGGCCACAAG +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSTRRPP*PHLGHK
Trigger: CTTGTGGCCCAAATGAGGCCATGGTGGTCTCCGGGT...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR CCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGTCTCCAGGGCAATGTaGGCAATCTCAGCCTCCGTC +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSVSRAM*AISASV
Trigger: GACGGAGGCTGAGATTGCCCACATTGCCCTGGAGAC...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAATGATGGCCCTCTGGTaGCCCTCTAACGTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSMMALW*PSNVSR
Trigger: CCTGGAGACGTTAGAGGGCCACCAGAGGGCCATCAT...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCATCCTCCACAGTCATGTaGGCCATGATGGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSSSTVM*AMMALW
Trigger: CCAGAGGGCCATCATGGCCCACATGACTGTGGAGGA...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAATCTCCTCTGCCACCTaGGGCAGCTTCTCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSISSAT*GSFSSS
Trigger: GCTGCTAGAGAAGCTGCCCCAGGTGGCAGAGGAGAT...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR TCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGACATGTTGACCAGGTCTaGGGAGGCCACTTTGAAAAC +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGHVDQV*GGHFEN
Trigger: GTTTTCAAAGTGGCCTCCTCAGACCTGGTCAACATG...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR TCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGCATCTTTTTGGACTTaGGCTGTTCGAGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQASFWT*AVRAFP
Trigger: GGGGAAGGCTCGAACAGCTCAAGTCCAAAAAGATGC...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR TCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGAATCTCACTCAGGTACTaGGCAGACACCTTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGISLRY*ADTFSC
Trigger: GCAGGAAAAGGTGTCTGCTCAGTACCTGAGTGAGAT...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR TCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGACGCTGGACACCAGTGTaGTCTTATTGGCTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGRWTPV*SYWLKS
Trigger: TGACTTCAGCCAATAAGATCACACTGGTGTCCAGCG...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR TCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGAGATGCTCACGCCTGTaGGTCTTTCCACACTCTCTG +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQRCSRL*VFPHSL
Trigger: CAGAGAGTGTGGAAAGACTCACAGGCGTGAGCATCT...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR GCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGAATCTCTCTTGGCCTCTaGTTCTCCAATCCGTGCATC +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGISLGL*FSNPCI
Trigger: GATGCACGGATTGGAGAAGCAGAGGCCAAGAGAGAT...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR GCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGCAGACACCTTTTCCTaGTTGGCTTTAGCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQADTFS*LALASR
Trigger: CCGGGAAGCTAAAGCCAAGCAGGAAAAGGTGTCTGC...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR GCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCACGCTGCTCCTCAATCTaGTGCTTAGTCTTGGCCACC +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSRCSSI*CLVLAT
Trigger: GGTGGCCAAGACTAAGCAGCAGATTGAGGAGCAGCG...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR GCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCATGCACCTGCACCCGCTaGTCCTCAATCTGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSCTCTR*SSICCL
Trigger: TAAGCAGCAGATTGAGGAGCAGCGGGTGCAGGTGCA...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR GCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGAGCTTCTGCCTCCGCCTaGATAATTAGTTGGGACTTC +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGASASA*IISWDF
Trigger: GAAGTCCCAACTAATTATGCAGGCGGAGGCAGAAGC...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGATTGAGAGAGATCCTCTaGATCTGTTGGATGCAGGGC +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGLREIL*ICWMQG
Trigger: GCCCTGCATCCAACAGATCCAGAGGATCTCTCTCAA...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR TCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGACATTTGGGCCACAAGTaGAAAACATGGTTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGHLGHK*KTWFRL
Trigger: CAGCCTGAACCATGTTTTTCACTTGTGGCCCAAATG...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR TCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGCATGTTGACCAGGTCTaGGGAGGCCACTTTGAAAAC +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQHVDQV*GGHFEN
Trigger: GTTTTCAAAGTGGCCTCCTCAGACCTGGTCAACATG...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR TCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGCATCTTTTTGGACTTaGGCTGTTCGAGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSASFWT*AVRAFP
Trigger: GGGGAAGGCTCGAACAGCTCAAGTCCAAAAAGATGC...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR TCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGATCTCACTCAGGTACTaGGCAGACACCTTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQISLRY*ADTFSC
Trigger: GCAGGAAAAGGTGTCTGCTCAGTACCTGAGTGAGAT...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR TCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGCGCTGGACACCAGTGTaGTCTTATTGGCTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQRWTPV*SYWLKS
Trigger: TGACTTCAGCCAATAAGATCACACTGGTGTCCAGCG...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR TCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAAGATGCTCACGCCTGTaGGTCTTTCCACACTCTCTG +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSRCSRL*VFPHSL
Trigger: CAGAGAGTGTGGAAAGACTCACAGGCGTGAGCATCT...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR GCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGTCTGGATCTGTTGGATaGAGGGCAGGACAAAGACAC +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQSGSVG*RAGQRH
Trigger: GTGTCTTTGTCCTGCCCTGCATCCAACAGATCCAGA...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR GCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGATCTCTCTTGGCCTCTaGTTCTCCAATCCGTGCATC +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQISLGL*FSNPCI
Trigger: GATGCACGGATTGGAGAAGCAGAGGCCAAGAGAGAT...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR GCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGCAGACACCTTTTCCTaGTTGGCTTTAGCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSADTFS*LALASR
Trigger: CCGGGAAGCTAAAGCCAAGCAGGAAAAGGTGTCTGC...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR GCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGATTCGTAATCTCTCTGTaGCTTGGCCATCTCGATCTC +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGFVISL*LGHLDL
Trigger: GAGATCGAGATGGCCAAGGCACAGAGAGATTACGAA...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR GCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGCTTCTGCCTCCGCCTaGATAATTAGTTGGGACTTC +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQASASA*IISWDF
Trigger: GAAGTCCCAACTAATTATGCAGGCGGAGGCAGAAGC...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGTTGAGAGAGATCCTCTaGATCTGTTGGATGCAGGGC +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQLREIL*ICWMQG
Trigger: GCCCTGCATCCAACAGATCCAGAGGATCTCTCTCAA...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR CCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGATCCTTGTTCTGCCCCTaGATTTTTACCTGGGCAATG +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGSLFCP*IFTWAM
Trigger: CATTGCCCAGGTAAAAATCCAGGGGCAGAACAAGGA...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR CCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGAAATCTCTCTGTGCCTTaGCCATCTCGATCTCACTCA +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGNLSVP*PSRSHS
Trigger: TGAGTGAGATCGAGATGGCCAAGGCACAGAGAGATT...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR TCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGCATTTGGGCCACAAGTaGAAAACATGGTTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQHLGHK*KTWFRL
Trigger: CAGCCTGAACCATGTTTTTCACTTGTGGCCCAAATG...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR TCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCACATGTTGACCAGGTCTaGGGAGGCCACTTTGAAAAC +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSHVDQV*GGHFEN
Trigger: GTTTTCAAAGTGGCCTCCTCAGACCTGGTCAACATG...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR TCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAATCTCACTCAGGTACTaGGCAGACACCTTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSISLRY*ADTFSC
Trigger: GCAGGAAAAGGTGTCTGCTCAGTACCTGAGTGAGAT...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR TCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGATGTGATCTTATTGGCTaGAGTCAAGGGACCACTGAT +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGCDLIG*SQGTTD
Trigger: ATCAGTGGTCCCTTGACTTCAGCCAATAAGATCACA...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR TCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCACGCTGGACACCAGTGTaGTCTTATTGGCTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSRWTPV*SYWLKS
Trigger: TGACTTCAGCCAATAAGATCACACTGGTGTCCAGCG...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR GCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCATCTGGATCTGTTGGATaGAGGGCAGGACAAAGACAC +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSSGSVG*RAGQRH
Trigger: GTGTCTTTGTCCTGCCCTGCATCCAACAGATCCAGA...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR GCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGAAACATCTCCTTGTTCTaGCCCTGGATTTTTACCTGG +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGNISLF*PWIFTW
Trigger: CCAGGTAAAAATCCAGGGGCAGAACAAGGAGATGTT...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR GCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGATGCTTCTCCAATCCGTaGATCTTTTTGGACTTGAGC +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGCFSNP*IFLDLS
Trigger: GCTCAAGTCCAAAAAGATGCACGGATTGGAGAAGCA...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR GCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAATCTCTCTTGGCCTCTaGTTCTCCAATCCGTGCATC +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSISLGL*FSNPCI
Trigger: GATGCACGGATTGGAGAAGCAGAGGCCAAGAGAGAT...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR GCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGTTCGTAATCTCTCTGTaGCTTGGCCATCTCGATCTC +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQFVISL*LGHLDL
Trigger: GAGATCGAGATGGCCAAGGCACAGAGAGATTACGAA...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR GCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGCTTCTGCCTCCGCCTaGATAATTAGTTGGGACTTC +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSASASA*IISWDF
Trigger: GAAGTCCCAACTAATTATGCAGGCGGAGGCAGAAGC...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGACACCATGGCCTCATTTaGGCCACAAGTGAAAAACAT +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGHHGLI*ATSEKH
Trigger: ATGTTTTTCACTTGTGGCCCAAATGAGGCCATGGTG...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR CCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCATTGAGAGAGATCCTCTaGATCTGTTGGATGCAGGGC +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSLREIL*ICWMQG
Trigger: GCCCTGCATCCAACAGATCCAGAGGATCTCTCTCAA...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR CCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGAATCTCTCTGTGCCTTaGCCATCTCGATCTCACTCA +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQNLSVP*PSRSHS
Trigger: TGAGTGAGATCGAGATGGCCAAGGCACAGAGAGATT...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR TCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCACATTTGGGCCACAAGTaGAAAACATGGTTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSHLGHK*KTWFRL
Trigger: CAGCCTGAACCATGTTTTTCACTTGTGGCCCAAATG...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR TCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGTGTGATCTTATTGGCTaGAGTCAAGGGACCACTGAT +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQCDLIG*SQGTTD
Trigger: ATCAGTGGTCCCTTGACTTCAGCCAATAAGATCACA...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR GCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGAACATCTCCTTGTTCTaGCCCTGGATTTTTACCTGG +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQNISLF*PWIFTW
Trigger: CCAGGTAAAAATCCAGGGGCAGAACAAGGAGATGTT...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR GCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCATTCGTAATCTCTCTGTaGCTTGGCCATCTCGATCTC +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSFVISL*LGHLDL
Trigger: GAGATCGAGATGGCCAAGGCACAGAGAGATTACGAA...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGCACCATGGCCTCATTTaGGCCACAAGTGAAAAACAT +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQHHGLI*ATSEKH
Trigger: ATGTTTTTCACTTGTGGCCCAAATGAGGCCATGGTG...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR CCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCATCCTTGTTCTGCCCCTaGATTTTTACCTGGGCAATG +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSSLFCP*IFTWAM
Trigger: CATTGCCCAGGTAAAAATCCAGGGGCAGAACAAGGA...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR CCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAAATCTCTCTGTGCCTTaGCCATCTCGATCTCACTCA +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSNLSVP*PSRSHS
Trigger: TGAGTGAGATCGAGATGGCCAAGGCACAGAGAGATT...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR TCA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGATTTGAAAACCTGTTCTaGGAATTTCTGCCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGFENLF*EFLPVL
Trigger: AAGGACAGGCAGAAATTCTCAGAACAGGTTTTCAAA...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR TCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCATGTGATCTTATTGGCTaGAGTCAAGGGACCACTGAT +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSCDLIG*SQGTTD
Trigger: ATCAGTGGTCCCTTGACTTCAGCCAATAAGATCACA...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR GCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCATGCTTCTCCAATCCGTaGATCTTTTTGGACTTGAGC +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSCFSNP*IFLDLS
Trigger: GCTCAAGTCCAAAAAGATGCACGGATTGGAGAAGCA...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCACACCATGGCCTCATTTaGGCCACAAGTGAAAAACAT +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSHHGLI*ATSEKH
Trigger: ATGTTTTTCACTTGTGGCCCAAATGAGGCCATGGTG...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR TCA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGTTTGAAAACCTGTTCTaGGAATTTCTGCCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQFENLF*EFLPVL
Trigger: AAGGACAGGCAGAAATTCTCAGAACAGGTTTTCAAA...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR TCA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCATTTGAAAACCTGTTCTaGGAATTTCTGCCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSFENLF*EFLPVL
Trigger: AAGGACAGGCAGAAATTCTCAGAACAGGTTTTCAAA...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS CCA 90 bp CCTTCTTGGCCATCTGCTCAGCCTCGGCTCGGGCTCGGGCCCCTATaGCAAAGGCCTCAGCTTCCCCACGCATCCGCACAGACGCGGCTT +
Preference number: 5 (lower is better)
Translates to: PSWPSAQPRLGLGPL*QRPQLPHASAQTRL
Trigger: AAGCCGCGTCTGTGCGGATGCGTGGGGAAGCTGAGGCCTTTGCCATAGGGGCCCGAGCCCGAGCCGAGGCTGAGCAGATGGCCAAGAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
ENST00000463435.5
ENST00000464837.5
ENST00000481843.5
ENST00000487376.5
ENST00000487385.5
ENST00000487549.1
ENST00000491057.5
ENST00000493620.5
CDS CCA 90 bp GGAGGAGAGGGAGGGAAAGCCTTTGCGGATGGGGAAGGCGCGCTGTaGCGTCCACAGGGGCCCATCCTTTCCCTTTCCCGTCAGGCCCTC +
Preference number: 5 (lower is better)
Translates to: GGEGGKAFADGEGAL*RPQGPILSLSRQAL
Trigger: GAGGGCCTGACGGGAAAGGGAAAGGATGGGCCCCTGTGGACGCCACAGCGCGCCTTCCCCATCCGCAAAGGCTTTCCCTCCCTCTCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000411778.5
ENST00000413165.5
ENST00000418160.5
ENST00000422636.5
ENST00000426417.5
ENST00000427784.5
ENST00000431966.5
ENST00000438134.5
ENST00000444497.5
ENST00000445669.5
ENST00000455034.5
ENST00000456042.5
CDS TCA 90 bp TTCGGCAGAACCCGGAGACCACCATGGCCTCATTTGGGCCACAAGTaGAAAACATGGTTCAGGCTGGAGCTTCCGGGACGCGGGCGGCAG +
Preference number: 5 (lower is better)
Translates to: FGRTRRPPWPHLGHK*KTWFRLELPGRGRQ
Trigger: CTGCCGCCCGCGTCCCGGAAGCTCCAGCCTGAACCATGTTTTTCACTTGTGGCCCAAATGAGGCCATGGTGGTCTCCGGGTTCTGCCGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000430843.5
ENST00000436822.6
ENST00000444632.6
ENST00000459887.5
ENST00000460694.5
ENST00000465796.1
ENST00000466680.5
ENST00000470643.5
ENST00000480605.1
ENST00000482241.1
ENST00000482675.5
ENST00000484168.1
ENST00000490802.5
ENST00000492441.5
ENST00000496175.5
CDS-3UTR CAA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGACCCTGCCGCACCCCGTaGCTGCGGCAGACGCGACCC +
Preference number: 5 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGPCRTP*LRQTRP
Trigger: GGGTCGCGTCTGCCGCAGCAACGGGGTGCGGCAGGG...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS TCA 90 bp CCCCATGGTCCCACTGCCGCTGGACACCAGTGTGATCTTATTGGCTaGAGTCAAGGGACCACTGATCTCCTCTGCCACCTGGGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: PHGPTAAGHQCDLIG*SQGTTDLLCHLGQL
Trigger: AAGCTGCCCCAGGTGGCAGAGGAGATCAGTGGTCCCTTGACTTCAGCCAATAAGATCACACTGGTGTCCAGCGGCAGTGGGACCATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
ENST00000463265.1
ENST00000463435.5
ENST00000464837.5
ENST00000481843.5
ENST00000487376.5
ENST00000487385.5
ENST00000487549.1
ENST00000491057.5
ENST00000493620.5
CDS GCA 90 bp CTGCTTAGTCTTGGCCACCTGAAGCTGATAGGCCAGGTCAGCCTGTaGTCGGCGGGTGTTGACCTCGATGTCATAGGCGGCCTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: LLSLGHLKLIGQVSL*SAGVDLDVIGGLLQ
Trigger: CTGAAGAAGGCCGCCTATGACATCGAGGTCAACACCCGCCGAGCACAGGCTGACCTGGCCTATCAGCTTCAGGTGGCCAAGACTAAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 30 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000413165.5
ENST00000422636.5
ENST00000431913.5
ENST00000432428.5
ENST00000436822.6
ENST00000438162.5
ENST00000439376.5
ENST00000442932.5
ENST00000444497.5
ENST00000444632.6
ENST00000445669.5
ENST00000446072.5
ENST00000454249.5
ENST00000456042.5
ENST00000457133.5
ENST00000463435.5
ENST00000463572.5
ENST00000476576.5
ENST00000476729.5
ENST00000479358.1
ENST00000481843.5
ENST00000482522.5
ENST00000484797.5
ENST00000487376.5
ENST00000487385.5
ENST00000491057.5
ENST00000493620.5
CDS CCA 90 bp GCTGGAGGGGAAGCAGTCTGGGCCTTGGAATGGTGGGAATCAAACTaGGCAGTTCGTGGCCATCAAGGGGCAGAAGTCTGGTGCTGGGAA +
Preference number: 5 (lower is better)
Translates to: AGGEAVWALEWWESN*AVRGHQGAEVWCWE
Trigger: TTCCCAGCACCAGACTTCTGCCCCTTGATGGCCACGAACTGCCCAGTTTGATTCCCACCATTCCAAGGCCCAGACTGCTTCCCCTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000462145.1
ENST00000472990.1
ENST00000481740.1
ENST00000484693.1
ENST00000484899.1
ENST00000488811.1
CDS-3UTR CAA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGCCCTGCCGCACCCCGTaGCTGCGGCAGACGCGACCC +
Preference number: 5 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQPCRTP*LRQTRP
Trigger: GGGTCGCGTCTGCCGCAGCAACGGGGTGCGGCAGGG...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS TCA 90 bp AACAGTACTTACCGGAGACCACCATGGCCTCATTTGGGCCACAAGTaGAAAACATGGTTCAGGCTGGAGCTTCCGGGACGCGGGCGGCAG +
Preference number: 5 (lower is better)
Translates to: NSTYRRPPWPHLGHK*KTWFRLELPGRGRQ
Trigger: CTGCCGCCCGCGTCCCGGAAGCTCCAGCCTGAACCATGTTTTTCACTTGTGGCCCAAATGAGGCCATGGTGGTCTCCGGTAAGTACTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000462145.1
ENST00000472990.1
ENST00000481740.1
ENST00000484693.1
ENST00000484899.1
ENST00000488811.1
CDS-3UTR CAA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCACCCTGCCGCACCCCGTaGCTGCGGCAGACGCGACCC +
Preference number: 5 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSPCRTP*LRQTRP
Trigger: GGGTCGCGTCTGCCGCAGCAACGGGGTGCGGCAGGG...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS TCA 90 bp AGGGCAATGTGGGCAATCTCAGCCTCCGTCTTCCCCAGGAACATCTaGCAGGCGGCCGCCAACATCTCCTTGTTCTGCCCCTGGATTTTT +
Preference number: 5 (lower is better)
Translates to: RAMWAISASVFPRNI*QAAANISLFCPWIF
Trigger: AAAAATCCAGGGGCAGAACAAGGAGATGTTGGCGGCCGCCTGTCAGATGTTCCTGGGGAAGACGGAGGCTGAGATTGCCCACATTGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 56 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000411848.1
ENST00000411944.5
ENST00000413165.5
ENST00000416018.5
ENST00000416389.5
ENST00000421565.5
ENST00000422636.5
ENST00000422714.5
ENST00000424683.5
ENST00000428438.1
ENST00000430384.5
ENST00000430843.5
ENST00000431913.5
ENST00000431966.5
ENST00000432428.5
ENST00000436025.1
ENST00000436197.5
ENST00000436822.6
ENST00000437093.5
ENST00000438162.5
ENST00000439376.5
ENST00000439743.1
ENST00000442932.5
ENST00000444068.5
ENST00000444497.5
ENST00000444632.6
ENST00000445319.5
ENST00000445383.5
ENST00000445669.5
ENST00000445853.5
ENST00000446072.5
ENST00000454249.5
ENST00000454773.5
ENST00000454845.1
ENST00000456042.5
ENST00000456844.1
ENST00000457133.5
ENST00000457733.5
ENST00000458306.1
ENST00000459887.5
ENST00000460694.5
ENST00000465796.1
ENST00000466680.5
ENST00000470163.5
ENST00000470643.5
ENST00000480605.1
ENST00000482241.1
ENST00000482675.5
ENST00000484168.1
ENST00000490802.5
ENST00000492441.5
ENST00000495886.1
ENST00000496175.5
CDS CCA 90 bp GGGAAGGGAACAACAGTACTTACCGGAGACCACCATGGCCTCATTTaGGCCACAAGTGAAAAACATGGTTCAGGCTGGAGCTTCCGGGAC +
Preference number: 5 (lower is better)
Translates to: GKGTTVLTGDHHGLI*ATSEKHGSGWSFRD
Trigger: GTCCCGGAAGCTCCAGCCTGAACCATGTTTTTCACTTGTGGCCCAAATGAGGCCATGGTGGTCTCCGGTAAGTACTGTTGTTCCCTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000462145.1
ENST00000472990.1
ENST00000481740.1
ENST00000484693.1
ENST00000484899.1
ENST00000488811.1
CDS-3UTR CAA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGAACACTGATGCCCATGTaGACCAGGTCTGAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGTLMPM*TRSEEA
Trigger: GGCCTCCTCAGACCTGGTCAACATGGGCATCAGTGT...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CAA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGACAGCTGAGCAGCCTCTaGGTACAGCTGGAAGGCTTC +
Preference number: 5 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGQLSSL*VQLEGF
Trigger: GAAGCCTTCCAGCTGTACCAAGAGGCTGCTCAGCTG...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CAA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGACACTGATGCCCATGTaGACCAGGTCTGAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQTLMPM*TRSEEA
Trigger: GGCCTCCTCAGACCTGGTCAACATGGGCATCAGTGT...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CAA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGCAGCTGAGCAGCCTCTaGGTACAGCTGGAAGGCTTC +
Preference number: 5 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQQLSSL*VQLEGF
Trigger: GAAGCCTTCCAGCTGTACCAAGAGGCTGCTCAGCTG...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CAA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGAGCCGCCAACATCTCCTaGTTCTGCCCCTGGATTTTT +
Preference number: 5 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGAANIS*FCPWIF
Trigger: AAAAATCCAGGGGCAGAACAAGGAGATGTTGGCGGC...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CAA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAACACTGATGCCCATGTaGACCAGGTCTGAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSTLMPM*TRSEEA
Trigger: GGCCTCCTCAGACCTGGTCAACATGGGCATCAGTGT...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CAA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGCCGCCAACATCTCCTaGTTCTGCCCCTGGATTTTT +
Preference number: 5 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQAANIS*FCPWIF
Trigger: AAAAATCCAGGGGCAGAACAAGGAGATGTTGGCGGC...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CAA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGATGCATCTTTTTGGACTaGAGCTGTTCGAGCCTTCCC +
Preference number: 5 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGCIFLD*SCSSLP
Trigger: GGGAAGGCTCGAACAGCTCAAGTCCAAAAAGATGCA...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CAA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGACACCTTTTCCTGCTaGGCTTTAGCTTCCCGGATC +
Preference number: 5 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQDTFSC*ALASRI
Trigger: GATCCGGGAAGCTAAAGCCAAGCAGGAAAAGGTGTC...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CAA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGCCGCCAACATCTCCTaGTTCTGCCCCTGGATTTTT +
Preference number: 5 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSAANIS*FCPWIF
Trigger: AAAAATCCAGGGGCAGAACAAGGAGATGTTGGCGGC...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CAA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGTGCATCTTTTTGGACTaGAGCTGTTCGAGCCTTCCC +
Preference number: 5 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQCIFLD*SCSSLP
Trigger: GGGAAGGCTCGAACAGCTCAAGTCCAAAAAGATGCA...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CAA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGACACCTTTTCCTGCTaGGCTTTAGCTTCCCGGATC +
Preference number: 5 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSDTFSC*ALASRI
Trigger: GATCCGGGAAGCTAAAGCCAAGCAGGAAAAGGTGTC...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CAA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGAACCAGTGTGATCTTATaGGCTGAAGTCAAGGGACCA +
Preference number: 5 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGTSVIL*AEVKGP
Trigger: TGGTCCCTTGACTTCAGCCAATAAGATCACACTGGT...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CAA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGATCTGAGGAGGCCACTTaGAAAACCTGTTCTGAGAAT +
Preference number: 5 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGSEEAT*KTCSEN
Trigger: ATTCTCAGAACAGGTTTTCAAAGTGGCCTCCTCAGA...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CAA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCATGCATCTTTTTGGACTaGAGCTGTTCGAGCCTTCCC +
Preference number: 5 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSCIFLD*SCSSLP
Trigger: GGGAAGGCTCGAACAGCTCAAGTCCAAAAAGATGCA...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CAA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGACCAGTGTGATCTTATaGGCTGAAGTCAAGGGACCA +
Preference number: 5 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQTSVIL*AEVKGP
Trigger: TGGTCCCTTGACTTCAGCCAATAAGATCACACTGGT...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CAA 90 bp TATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGGATTTTCACTCTTGACATaGAGGGTCAGTGTGTTGAGA +
Preference number: 5 (lower is better)
Translates to: YLGSKVENLQPIPQSWSGFSLLT*RVSVLR
Trigger: TCTCAACACACTGACCCTCAATGTCAAGAGTGAAAA...TCCTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS-3UTR CAA 90 bp TTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAGTCTGAGGAGGCCACTTaGAAAACCTGTTCTGAGAAT +
Preference number: 5 (lower is better)
Translates to: FIWVAKLKTSSPSLSLGQSEEAT*KTCSEN
Trigger: ATTCTCAGAACAGGTTTTCAAAGTGGCCTCCTCAGA...CTGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CAA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCAACCAGTGTGATCTTATaGGCTGAAGTCAAGGGACCA +
Preference number: 5 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSTSVIL*AEVKGP
Trigger: TGGTCCCTTGACTTCAGCCAATAAGATCACACTGGT...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CAA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCATCTGAGGAGGCCACTTaGAAAACCTGTTCTGAGAAT +
Preference number: 5 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSSEEAT*KTCSEN
Trigger: ATTCTCAGAACAGGTTTTCAAAGTGGCCTCCTCAGA...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS-3UTR CAA 90 bp ATTTATTTGGGTAGCAAAGTTGAAAACCTCCAGCCCATCCCTCAGTCTTGGTCATTTTCACTCTTGACATaGAGGGTCAGTGTGTTGAGA +
Preference number: 5 (lower is better)
Translates to: IYLGSKVENLQPIPQSWSFSLLT*RVSVLR
Trigger: TCTCAACACACTGACCCTCAATGTCAAGAGTGAAAA...TGACCAAGACTGAGGGATGGGCTGGAGGTTTTCAACTTTGCTACCCAAATAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000436822.6
ENST00000444632.6
CDS CCA 72 bp CCATCTGCTCAGCCTCGGCTCGGGCTCGGGCCCCTATaGCAAAGGCCTCAGCTTCCCCACGCATCCGCACAG +
Preference number: 6 (lower is better)
Translates to: PSAQPRLGLGPL*QRPQLPHASAQ
Trigger: CTGTGCGGATGCGTGGGGAAGCTGAGGCCTTTGCCATAGGGGCCCGAGCCCGAGCCGAGGCTGAGCAGATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
ENST00000463435.5
ENST00000464837.5
ENST00000481843.5
ENST00000487376.5
ENST00000487385.5
ENST00000487549.1
ENST00000491057.5
ENST00000493620.5
CDS CCA 72 bp GGAGGGAAAGCCTTTGCGGATGGGGAAGGCGCGCTGTaGCGTCCACAGGGGCCCATCCTTTCCCTTTCCCGT +
Preference number: 6 (lower is better)
Translates to: GGKAFADGEGAL*RPQGPILSLSR
Trigger: ACGGGAAAGGGAAAGGATGGGCCCCTGTGGACGCCACAGCGCGCCTTCCCCATCCGCAAAGGCTTTCCCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000411778.5
ENST00000413165.5
ENST00000418160.5
ENST00000422636.5
ENST00000426417.5
ENST00000427784.5
ENST00000431966.5
ENST00000438134.5
ENST00000444497.5
ENST00000445669.5
ENST00000455034.5
ENST00000456042.5
CDS GCA 72 bp GCTCCCTTTGATAAAGGTCCCCCGCGCCCAGAGGCCTaGAGACCTTTCCCCTCTCTCCCTGCTTCTCGGCAG +
Preference number: 6 (lower is better)
Translates to: APFDKGPPRPEA*RPFPSLPASRQ
Trigger: CTGCCGAGAAGCAGGGAGAGAGGGGAAAGGTCTGCAGGCCTCTGGGCGCGGGGGACCTTTATCAAAGGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000431913.5
ENST00000438162.5
ENST00000439376.5
ENST00000442932.5
ENST00000454249.5
ENST00000457733.5
CDS GCA 72 bp CTTGGCCACCTGAAGCTGATAGGCCAGGTCAGCCTGTaGTCGGCGGGTGTTGACCTCGATGTCATAGGCGGC +
Preference number: 6 (lower is better)
Translates to: LGHLKLIGQVSL*SAGVDLDVIGG
Trigger: GCCGCCTATGACATCGAGGTCAACACCCGCCGAGCACAGGCTGACCTGGCCTATCAGCTTCAGGTGGCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 30 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000413165.5
ENST00000422636.5
ENST00000431913.5
ENST00000432428.5
ENST00000436822.6
ENST00000438162.5
ENST00000439376.5
ENST00000442932.5
ENST00000444497.5
ENST00000444632.6
ENST00000445669.5
ENST00000446072.5
ENST00000454249.5
ENST00000456042.5
ENST00000457133.5
ENST00000463435.5
ENST00000463572.5
ENST00000476576.5
ENST00000476729.5
ENST00000479358.1
ENST00000481843.5
ENST00000482522.5
ENST00000484797.5
ENST00000487376.5
ENST00000487385.5
ENST00000491057.5
ENST00000493620.5
CDS CAA 90 bp GCTGCCCCCATGGTCCCACTGCCGCTGGACACCAGTGTGATCTTATaGGCTGAAGTCAAGGGACCACTGATCTCCTCTGCCACCTGGGGC +
Preference number: 6 (lower is better)
Translates to: AAPMVPLPLDTSVIL*AEVKGPLISSATWG
Trigger: GCCCCAGGTGGCAGAGGAGATCAGTGGTCCCTTGACTTCAGCCAATAAGATCACACTGGTGTCCAGCGGCAGTGGGACCATGGGGGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 17 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
ENST00000463265.1
ENST00000463435.5
ENST00000464837.5
ENST00000481843.5
ENST00000487376.5
ENST00000487385.5
ENST00000487549.1
ENST00000491057.5
ENST00000493620.5
CDS TCA 72 bp TGGGCAATCTCAGCCTCCGTCTTCCCCAGGAACATCTaGCAGGCGGCCGCCAACATCTCCTTGTTCTGCCCC +
Preference number: 6 (lower is better)
Translates to: WAISASVFPRNI*QAAANISLFCP
Trigger: GGGGCAGAACAAGGAGATGTTGGCGGCCGCCTGTCAGATGTTCCTGGGGAAGACGGAGGCTGAGATTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 56 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000411848.1
ENST00000411944.5
ENST00000413165.5
ENST00000416018.5
ENST00000416389.5
ENST00000421565.5
ENST00000422636.5
ENST00000422714.5
ENST00000424683.5
ENST00000428438.1
ENST00000430384.5
ENST00000430843.5
ENST00000431913.5
ENST00000431966.5
ENST00000432428.5
ENST00000436025.1
ENST00000436197.5
ENST00000436822.6
ENST00000437093.5
ENST00000438162.5
ENST00000439376.5
ENST00000439743.1
ENST00000442932.5
ENST00000444068.5
ENST00000444497.5
ENST00000444632.6
ENST00000445319.5
ENST00000445383.5
ENST00000445669.5
ENST00000445853.5
ENST00000446072.5
ENST00000454249.5
ENST00000454773.5
ENST00000454845.1
ENST00000456042.5
ENST00000456844.1
ENST00000457133.5
ENST00000457733.5
ENST00000458306.1
ENST00000459887.5
ENST00000460694.5
ENST00000465796.1
ENST00000466680.5
ENST00000470163.5
ENST00000470643.5
ENST00000480605.1
ENST00000482241.1
ENST00000482675.5
ENST00000484168.1
ENST00000490802.5
ENST00000492441.5
ENST00000495886.1
ENST00000496175.5
CDS TCA 72 bp GCAAGGTGTGGGGCAGTGAGGAACGGTGGCAGAGCTTaGATGTGGAAGACTGAGGAACTGGCGGGGGTGAGG +
Preference number: 6 (lower is better)
Translates to: ARCGAVRNGGRA*MWKTEELAGVR
Trigger: CCTCACCCCCGCCAGTTCCTCAGTCTTCCACATTCAAGCTCTGCCACCGTTCCTCACTGCCCCACACCTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000462145.1
ENST00000472990.1
ENST00000481740.1
ENST00000484693.1
ENST00000484899.1
ENST00000488811.1
CDS TCA 72 bp GGGGGCTTCGGCAGAACCCTGCAAGGTGTGGGGCAGTaGGGAACGGTGGCAGAGCTTGAATGTGGAAGACTG +
Preference number: 6 (lower is better)
Translates to: GGFGRTLQGVGQ*GTVAELECGRL
Trigger: CAGTCTTCCACATTCAAGCTCTGCCACCGTTCCTCACTGCCCCACACCTTGCAGGGTTCTGCCGAAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000462145.1
ENST00000472990.1
ENST00000481740.1
ENST00000484693.1
ENST00000484899.1
ENST00000488811.1
CDS GCA 72 bp CCACGCATCCGCACAGACGCGGCTTCTGCCTCCGCCTaGATAATTAGTTGGGACTTCTCTGCCTCGGCTAGG +
Preference number: 6 (lower is better)
Translates to: PRIRTDAASASA*IISWDFSASAR
Trigger: CCTAGCCGAGGCAGAGAAGTCCCAACTAATTATGCAGGCGGAGGCAGAAGCCGCGTCTGTGCGGATGCGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
CDS CCA 72 bp GCCCTCTGGTGGCCCTCTAACGTCTCCAGGGCAATGTaGGCAATCTCAGCCTCCGTCTTCCCCAGGAACATC +
Preference number: 6 (lower is better)
Translates to: ALWWPSNVSRAM*AISASVFPRNI
Trigger: GATGTTCCTGGGGAAGACGGAGGCTGAGATTGCCCACATTGCCCTGGAGACGTTAGAGGGCCACCAGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 56 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000411848.1
ENST00000411944.5
ENST00000413165.5
ENST00000416018.5
ENST00000416389.5
ENST00000421565.5
ENST00000422636.5
ENST00000422714.5
ENST00000424683.5
ENST00000428438.1
ENST00000430384.5
ENST00000430843.5
ENST00000431913.5
ENST00000431966.5
ENST00000432428.5
ENST00000436025.1
ENST00000436197.5
ENST00000436822.6
ENST00000437093.5
ENST00000438162.5
ENST00000439376.5
ENST00000439743.1
ENST00000442932.5
ENST00000444068.5
ENST00000444497.5
ENST00000444632.6
ENST00000445319.5
ENST00000445383.5
ENST00000445669.5
ENST00000445853.5
ENST00000446072.5
ENST00000454249.5
ENST00000454773.5
ENST00000454845.1
ENST00000456042.5
ENST00000456844.1
ENST00000457133.5
ENST00000457733.5
ENST00000458306.1
ENST00000459887.5
ENST00000460694.5
ENST00000465796.1
ENST00000466680.5
ENST00000470163.5
ENST00000470643.5
ENST00000480605.1
ENST00000482241.1
ENST00000482675.5
ENST00000484168.1
ENST00000490802.5
ENST00000492441.5
ENST00000495886.1
ENST00000496175.5
CDS GCA 72 bp CCACGCATCCGCACAGACGCGGCTTCTGCCTCCGCCTaGATAATTAGTTGGGACCTGTGGACAGAAGGGAAG +
Preference number: 6 (lower is better)
Translates to: PRIRTDAASASA*IISWDLWTEGK
Trigger: CTTCCCTTCTGTCCACAGGTCCCAACTAATTATGCAGGCGGAGGCAGAAGCCGCGTCTGTGCGGATGCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000463435.5
ENST00000464837.5
ENST00000481843.5
ENST00000487376.5
ENST00000487385.5
ENST00000487549.1
ENST00000491057.5
ENST00000493620.5
CDS CCA 72 bp TCCTCCACAGTCATGTGGGCCATGATGGCCCTCTGGTaGCCCTCTAACGTCTCCAGGGCAATGTGGGCAATC +
Preference number: 6 (lower is better)
Translates to: SSTVMWAMMALW*PSNVSRAMWAI
Trigger: GATTGCCCACATTGCCCTGGAGACGTTAGAGGGCCACCAGAGGGCCATCATGGCCCACATGACTGTGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 56 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000411848.1
ENST00000411944.5
ENST00000413165.5
ENST00000416018.5
ENST00000416389.5
ENST00000421565.5
ENST00000422636.5
ENST00000422714.5
ENST00000424683.5
ENST00000428438.1
ENST00000430384.5
ENST00000430843.5
ENST00000431913.5
ENST00000431966.5
ENST00000432428.5
ENST00000436025.1
ENST00000436197.5
ENST00000436822.6
ENST00000437093.5
ENST00000438162.5
ENST00000439376.5
ENST00000439743.1
ENST00000442932.5
ENST00000444068.5
ENST00000444497.5
ENST00000444632.6
ENST00000445319.5
ENST00000445383.5
ENST00000445669.5
ENST00000445853.5
ENST00000446072.5
ENST00000454249.5
ENST00000454773.5
ENST00000454845.1
ENST00000456042.5
ENST00000456844.1
ENST00000457133.5
ENST00000457733.5
ENST00000458306.1
ENST00000459887.5
ENST00000460694.5
ENST00000465796.1
ENST00000466680.5
ENST00000470163.5
ENST00000470643.5
ENST00000480605.1
ENST00000482241.1
ENST00000482675.5
ENST00000484168.1
ENST00000490802.5
ENST00000492441.5
ENST00000495886.1
ENST00000496175.5
CDS CCA 72 bp ATCTCCTCCACAGTCATGTGGGCCATGATGGCCCTCTaGTGGCCCTCTAACGTCTCCAGGGCAATGTGGGCA +
Preference number: 6 (lower is better)
Translates to: ISSTVMWAMMAL*WPSNVSRAMWA
Trigger: TGCCCACATTGCCCTGGAGACGTTAGAGGGCCACCAGAGGGCCATCATGGCCCACATGACTGTGGAGGAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 56 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000411848.1
ENST00000411944.5
ENST00000413165.5
ENST00000416018.5
ENST00000416389.5
ENST00000421565.5
ENST00000422636.5
ENST00000422714.5
ENST00000424683.5
ENST00000428438.1
ENST00000430384.5
ENST00000430843.5
ENST00000431913.5
ENST00000431966.5
ENST00000432428.5
ENST00000436025.1
ENST00000436197.5
ENST00000436822.6
ENST00000437093.5
ENST00000438162.5
ENST00000439376.5
ENST00000439743.1
ENST00000442932.5
ENST00000444068.5
ENST00000444497.5
ENST00000444632.6
ENST00000445319.5
ENST00000445383.5
ENST00000445669.5
ENST00000445853.5
ENST00000446072.5
ENST00000454249.5
ENST00000454773.5
ENST00000454845.1
ENST00000456042.5
ENST00000456844.1
ENST00000457133.5
ENST00000457733.5
ENST00000458306.1
ENST00000459887.5
ENST00000460694.5
ENST00000465796.1
ENST00000466680.5
ENST00000470163.5
ENST00000470643.5
ENST00000480605.1
ENST00000482241.1
ENST00000482675.5
ENST00000484168.1
ENST00000490802.5
ENST00000492441.5
ENST00000495886.1
ENST00000496175.5
CDS CCA 72 bp GGCGAGTTAGAATGTCCAGTACTTCCCCAGTCACTTTaGCTGCCCCCATGGTCCCACTGCCGCTGGACACCA +
Preference number: 6 (lower is better)
Translates to: GELECPVLPQSL*LPPWSHCRWTP
Trigger: TGGTGTCCAGCGGCAGTGGGACCATGGGGGCAGCCAAAGTGACTGGGGAAGTACTGGACATTCTAACTCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 17 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
ENST00000463265.1
ENST00000463435.5
ENST00000464837.5
ENST00000481843.5
ENST00000487376.5
ENST00000487385.5
ENST00000487549.1
ENST00000491057.5
ENST00000493620.5
CDS TCA 72 bp ACCCGGAGACCACCATGGCCTCATTTGGGCCACAAGTaGAAAACATGGTTCAGGCTGGAGCTTCCGGGACGC +
Preference number: 6 (lower is better)
Translates to: TRRPPWPHLGHK*KTWFRLELPGR
Trigger: GCGTCCCGGAAGCTCCAGCCTGAACCATGTTTTTCACTTGTGGCCCAAATGAGGCCATGGTGGTCTCCGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000430843.5
ENST00000436822.6
ENST00000444632.6
ENST00000459887.5
ENST00000460694.5
ENST00000465796.1
ENST00000466680.5
ENST00000470643.5
ENST00000480605.1
ENST00000482241.1
ENST00000482675.5
ENST00000484168.1
ENST00000490802.5
ENST00000492441.5
ENST00000496175.5
CDS CCA 72 bp AGAGGCCAGACTCACAGGGGTTCTGGGGTCACTGGCTaGGAAGGGAACAACAGTACTTACCGGAGACCACCA +
Preference number: 6 (lower is better)
Translates to: RGQTHRGSGVTG*EGNNSTYRRPP
Trigger: TGGTGGTCTCCGGTAAGTACTGTTGTTCCCTTCCCAGCCAGTGACCCCAGAACCCCTGTGAGTCTGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000462145.1
ENST00000472990.1
ENST00000481740.1
ENST00000484693.1
ENST00000484899.1
ENST00000488811.1
CDS TCA 72 bp TGTCCTTATAGATCTCCTCCACAGTCATGTGGGCCATaGTGGCCCTCTGGTGGCCCTCTAACGTCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: CPYRSPPQSCGP*WPSGGPLTSPG
Trigger: CCCTGGAGACGTTAGAGGGCCACCAGAGGGCCATCATGGCCCACATGACTGTGGAGGAGATCTATAAGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 56 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000411848.1
ENST00000411944.5
ENST00000413165.5
ENST00000416018.5
ENST00000416389.5
ENST00000421565.5
ENST00000422636.5
ENST00000422714.5
ENST00000424683.5
ENST00000428438.1
ENST00000430384.5
ENST00000430843.5
ENST00000431913.5
ENST00000431966.5
ENST00000432428.5
ENST00000436025.1
ENST00000436197.5
ENST00000436822.6
ENST00000437093.5
ENST00000438162.5
ENST00000439376.5
ENST00000439743.1
ENST00000442932.5
ENST00000444068.5
ENST00000444497.5
ENST00000444632.6
ENST00000445319.5
ENST00000445383.5
ENST00000445669.5
ENST00000445853.5
ENST00000446072.5
ENST00000454249.5
ENST00000454773.5
ENST00000454845.1
ENST00000456042.5
ENST00000456844.1
ENST00000457133.5
ENST00000457733.5
ENST00000458306.1
ENST00000459887.5
ENST00000460694.5
ENST00000465796.1
ENST00000466680.5
ENST00000470163.5
ENST00000470643.5
ENST00000480605.1
ENST00000482241.1
ENST00000482675.5
ENST00000484168.1
ENST00000490802.5
ENST00000492441.5
ENST00000495886.1
ENST00000496175.5
CDS TCA 72 bp CCCACTGCCGCTGGACACCAGTGTGATCTTATTGGCTaGAGTCAAGGGACCACTGATCTCCTCTGCCACCTG +
Preference number: 6 (lower is better)
Translates to: PTAAGHQCDLIG*SQGTTDLLCHL
Trigger: CAGGTGGCAGAGGAGATCAGTGGTCCCTTGACTTCAGCCAATAAGATCACACTGGTGTCCAGCGGCAGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
ENST00000463265.1
ENST00000463435.5
ENST00000464837.5
ENST00000481843.5
ENST00000487376.5
ENST00000487385.5
ENST00000487549.1
ENST00000491057.5
ENST00000493620.5
CDS TCA 72 bp GTCCGGAGACCACCATGGCCTCATTTGGGCCACAAGTaGAAAACATGGTTCAGGCTGGAGCTGGAGGAGAGG +
Preference number: 6 (lower is better)
Translates to: VRRPPWPHLGHK*KTWFRLELEER
Trigger: CCTCTCCTCCAGCTCCAGCCTGAACCATGTTTTTCACTTGTGGCCCAAATGAGGCCATGGTGGTCTCCGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000411778.5
ENST00000418160.5
ENST00000426417.5
ENST00000427784.5
ENST00000438134.5
ENST00000455034.5
CDS TCA 72 bp ACCCGGAGACCACCATGGCCTCATTTGGGCCACAAGTaGAAAACATGGTTCAGGCTGGAGCTGGAGGAGAGG +
Preference number: 6 (lower is better)
Translates to: TRRPPWPHLGHK*KTWFRLELEER
Trigger: CCTCTCCTCCAGCTCCAGCCTGAACCATGTTTTTCACTTGTGGCCCAAATGAGGCCATGGTGGTCTCCGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000421565.5
ENST00000430384.5
ENST00000436197.5
ENST00000445383.5
ENST00000445853.5
ENST00000454773.5
CDS TCA 72 bp CTTCAGCACTCCATCTTGGGGTGCCTAGGTGGCAAGTaGGCTAGGCAGGGTCAGGGAGGGGACATTTACTTC +
Preference number: 6 (lower is better)
Translates to: LQHSILGCLGGK*ARQGQGGDIYF
Trigger: GAAGTAAATGTCCCCTCCCTGACCCTGCCTAGCTCACTTGCCACCTAGGCACCCCAAGATGGAGTGCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000463435.5
ENST00000464837.5
ENST00000481843.5
ENST00000487376.5
ENST00000487385.5
ENST00000487549.1
ENST00000491057.5
ENST00000493620.5
CDS TCA 72 bp TACCGGAGACCACCATGGCCTCATTTGGGCCACAAGTaGAAAACATGGTTCAGGCTGGAGCTTCCGGGACGC +
Preference number: 6 (lower is better)
Translates to: YRRPPWPHLGHK*KTWFRLELPGR
Trigger: GCGTCCCGGAAGCTCCAGCCTGAACCATGTTTTTCACTTGTGGCCCAAATGAGGCCATGGTGGTCTCCGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000462145.1
ENST00000472990.1
ENST00000481740.1
ENST00000484693.1
ENST00000484899.1
ENST00000488811.1
CDS CCA 72 bp GCTTCGGCAGAACCCGGAGACCACCATGGCCTCATTTaGGCCACAAGTGAAAAACATGGTTCAGGCTGGAGC +
Preference number: 6 (lower is better)
Translates to: ASAEPGDHHGLI*ATSEKHGSGWS
Trigger: GCTCCAGCCTGAACCATGTTTTTCACTTGTGGCCCAAATGAGGCCATGGTGGTCTCCGGGTTCTGCCGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 36 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000421565.5
ENST00000424683.5
ENST00000428438.1
ENST00000430384.5
ENST00000430843.5
ENST00000431913.5
ENST00000436197.5
ENST00000436822.6
ENST00000438162.5
ENST00000439376.5
ENST00000439743.1
ENST00000442932.5
ENST00000444068.5
ENST00000444632.6
ENST00000445383.5
ENST00000445853.5
ENST00000454249.5
ENST00000454773.5
ENST00000454845.1
ENST00000456844.1
ENST00000457733.5
ENST00000459887.5
ENST00000460694.5
ENST00000465796.1
ENST00000466680.5
ENST00000470643.5
ENST00000480605.1
ENST00000482241.1
ENST00000482675.5
ENST00000484168.1
ENST00000490802.5
ENST00000492441.5
ENST00000496175.5
CDS CCA 72 bp GAAGCAGTCTGGGCCTTGGAATGGTGGGAATCAAACTaGGCAGTTCGTGGCCATCAAGGGGCAGAAGTCTGG +
Preference number: 6 (lower is better)
Translates to: EAVWALEWWESN*AVRGHQGAEVW
Trigger: CCAGACTTCTGCCCCTTGATGGCCACGAACTGCCCAGTTTGATTCCCACCATTCCAAGGCCCAGACTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000462145.1
ENST00000472990.1
ENST00000481740.1
ENST00000484693.1
ENST00000484899.1
ENST00000488811.1
CDS TCA 72 bp TACCGGAGACCACCATGGCCTCATTTGGGCCACAAGTaGAAAACATGGTTCAGGCTGGAGCTGGAGGAGAGG +
Preference number: 6 (lower is better)
Translates to: YRRPPWPHLGHK*KTWFRLELEER
Trigger: CCTCTCCTCCAGCTCCAGCCTGAACCATGTTTTTCACTTGTGGCCCAAATGAGGCCATGGTGGTCTCCGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413165.5
ENST00000422636.5
ENST00000431966.5
ENST00000444497.5
ENST00000445669.5
ENST00000456042.5
CDS CAA 72 bp ATGGTCCCACTGCCGCTGGACACCAGTGTGATCTTATaGGCTGAAGTCAAGGGACCACTGATCTCCTCTGCC +
Preference number: 6 (lower is better)
Translates to: MVPLPLDTSVIL*AEVKGPLISSA
Trigger: GGCAGAGGAGATCAGTGGTCCCTTGACTTCAGCCAATAAGATCACACTGGTGTCCAGCGGCAGTGGGACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000420604.1
ENST00000427701.1
ENST00000436822.6
ENST00000444632.6
ENST00000446072.5
ENST00000463265.1
ENST00000463435.5
ENST00000464837.5
ENST00000481843.5
ENST00000487376.5
ENST00000487385.5
ENST00000487549.1
ENST00000491057.5
ENST00000493620.5
CDS CCA 72 bp CCCTGGATTTTTACCGGAGACCACCATGGCCTCATTTaGGCCACAAGTGAAAAACATGGTTCAGGCTGGAGC +
Preference number: 6 (lower is better)
Translates to: PWIFTGDHHGLI*ATSEKHGSGWS
Trigger: GCTCCAGCCTGAACCATGTTTTTCACTTGTGGCCCAAATGAGGCCATGGTGGTCTCCGGTAAAAATCCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000413165.5
ENST00000422636.5
ENST00000431966.5
ENST00000444497.5
ENST00000445669.5
ENST00000456042.5
CDS CAA 72 bp TGCTTGGCTTTAGCTTCCCGGATCCCAGCATCTCTCTaGGCCTCTGCTTCTCCAATCCGTGCATCTTTTTGG +
Preference number: 6 (lower is better)
Translates to: CLALASRIPASL*ASASPIRASFW
Trigger: CCAAAAAGATGCACGGATTGGAGAAGCAGAGGCCAAGAGAGATGCTGGGATCCGGGAAGCTAAAGCCAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 70 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000411778.5
ENST00000411848.1
ENST00000411944.5
ENST00000413165.5
ENST00000416018.5
ENST00000416389.5
ENST00000418160.5
ENST00000421565.5
ENST00000422636.5
ENST00000422714.5
ENST00000426417.5
ENST00000427784.5
ENST00000430384.5
ENST00000430843.5
ENST00000431913.5
ENST00000431966.5
ENST00000432428.5
ENST00000436197.5
ENST00000436822.6
ENST00000437093.5
ENST00000438134.5
ENST00000438162.5
ENST00000439376.5
ENST00000439396.5
ENST00000442932.5
ENST00000444497.5
ENST00000444632.6
ENST00000445319.5
ENST00000445383.5
ENST00000445669.5
ENST00000445853.5
ENST00000446072.5
ENST00000454249.5
ENST00000454773.5
ENST00000455034.5
ENST00000456042.5
ENST00000457133.5
ENST00000457733.5
ENST00000458306.1
ENST00000459887.5
ENST00000460694.5
ENST00000463435.5
ENST00000463572.5
ENST00000465796.1
ENST00000466680.5
ENST00000470163.5
ENST00000470643.5
ENST00000474138.1
ENST00000475936.5
ENST00000476576.5
ENST00000476729.5
ENST00000479358.1
ENST00000480605.1
ENST00000481843.5
ENST00000482241.1
ENST00000482522.5
ENST00000482675.5
ENST00000484168.1
ENST00000484797.5
ENST00000487376.5
ENST00000487385.5
ENST00000490802.5
ENST00000491057.5
ENST00000492441.5
ENST00000493620.5
ENST00000495886.1
ENST00000496175.5
CDS CAA 90 bp TGCTTCTTCCATTTCAGGGAAAGAAAGGAGGAGGAGGCAAGTGCCTaGGGGTGCCTGGAAAAGATGAGACTAGCAGAGGAACTTCTCTGC +
Preference number: 6 (lower is better)
Translates to: CFFHFRERKEEEASA*GCLEKMRLAEELLC
Trigger: GCAGAGAAGTTCCTCTGCTAGTCTCATCTTTTCCAGGCACCCCAAGGCACTTGCCTCCTCCTCCTTTCTTTCCCTGAAATGGAAGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000459887.5
ENST00000462145.1
ENST00000465796.1
ENST00000472990.1
ENST00000480605.1
ENST00000481740.1
ENST00000482241.1
ENST00000482255.1
ENST00000482675.5
ENST00000484168.1
ENST00000484693.1
ENST00000484899.1
ENST00000488811.1
ENST00000495886.1
CDS CCA 72 bp ACAACAGTACTTACCGGAGACCACCATGGCCTCATTTaGGCCACAAGTGAAAAACATGGTTCAGGCTGGAGC +
Preference number: 6 (lower is better)
Translates to: TTVLTGDHHGLI*ATSEKHGSGWS
Trigger: GCTCCAGCCTGAACCATGTTTTTCACTTGTGGCCCAAATGAGGCCATGGTGGTCTCCGGTAAGTACTGTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000462145.1
ENST00000472990.1
ENST00000481740.1
ENST00000484693.1
ENST00000484899.1
ENST00000488811.1
CDS CAA 90 bp ATCTCTCTTGGCCTCTGCTTCTCCAATCCGTGCATCTTTTTGGACTaGAGCTGTTCGAGCCTTCCCCAAAGAGTGCAAATAGTCCTGGTC +
Preference number: 6 (lower is better)
Translates to: ISLGLCFSNPCIFLD*SCSSLPQRVQIVLV
Trigger: GACCAGGACTATTTGCACTCTTTGGGGAAGGCTCGAACAGCTCAAGTCCAAAAAGATGCACGGATTGGAGAAGCAGAGGCCAAGAGAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 56 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000411848.1
ENST00000411944.5
ENST00000413165.5
ENST00000416018.5
ENST00000416389.5
ENST00000421565.5
ENST00000422636.5
ENST00000422714.5
ENST00000430384.5
ENST00000430843.5
ENST00000431913.5
ENST00000431966.5
ENST00000432428.5
ENST00000436197.5
ENST00000436822.6
ENST00000437093.5
ENST00000438162.5
ENST00000439376.5
ENST00000442932.5
ENST00000444497.5
ENST00000444632.6
ENST00000445319.5
ENST00000445383.5
ENST00000445669.5
ENST00000445853.5
ENST00000446072.5
ENST00000454249.5
ENST00000454773.5
ENST00000456042.5
ENST00000457133.5
ENST00000457733.5
ENST00000458306.1
ENST00000459887.5
ENST00000460694.5
ENST00000463435.5
ENST00000465796.1
ENST00000466680.5
ENST00000470163.5
ENST00000470643.5
ENST00000475936.5
ENST00000480605.1
ENST00000481843.5
ENST00000482241.1
ENST00000482675.5
ENST00000484168.1
ENST00000487376.5
ENST00000487385.5
ENST00000490802.5
ENST00000491057.5
ENST00000492441.5
ENST00000493620.5
ENST00000495886.1
ENST00000496175.5
CDS CAA 90 bp ATCTCTCTTGGCCTCTGCTTCTCCAATCCGTGCATCTTTTTGGACTaGAGCTGTTCGAGCCTTCCCCAAAGAGTGCAAATAGTCCGGAGA +
Preference number: 6 (lower is better)
Translates to: ISLGLCFSNPCIFLD*SCSSLPQRVQIVRR
Trigger: TCTCCGGACTATTTGCACTCTTTGGGGAAGGCTCGAACAGCTCAAGTCCAAAAAGATGCACGGATTGGAGAAGCAGAGGCCAAGAGAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000411778.5
ENST00000418160.5
ENST00000426417.5
ENST00000427784.5
ENST00000438134.5
ENST00000455034.5
CDS CAA 90 bp ATCTCTCTTGGCCTCTGCTTCTCCAATCCGTGCATCTTTTTGGACTaGAGCTGTTCGAGCCTTCCCCAAAGAGTGCAAATAGTCCTGTGG +
Preference number: 6 (lower is better)
Translates to: ISLGLCFSNPCIFLD*SCSSLPQRVQIVLW
Trigger: CCACAGGACTATTTGCACTCTTTGGGGAAGGCTCGAACAGCTCAAGTCCAAAAAGATGCACGGATTGGAGAAGCAGAGGCCAAGAGAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000463572.5
ENST00000474138.1
ENST00000476576.5
ENST00000476729.5
ENST00000479358.1
ENST00000482522.5
ENST00000484797.5
CDS CAA 72 bp GGCCTCTGCTTCTCCAATCCGTGCATCTTTTTGGACTaGAGCTGTTCGAGCCTTCCCCAAAGAGTGCAAATA +
Preference number: 6 (lower is better)
Translates to: GLCFSNPCIFLD*SCSSLPQRVQI
Trigger: TATTTGCACTCTTTGGGGAAGGCTCGAACAGCTCAAGTCCAAAAAGATGCACGGATTGGAGAAGCAGAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 77 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000411778.5
ENST00000411848.1
ENST00000411944.5
ENST00000413165.5
ENST00000416018.5
ENST00000416389.5
ENST00000418160.5
ENST00000421565.5
ENST00000422636.5
ENST00000422714.5
ENST00000424683.5
ENST00000426417.5
ENST00000427784.5
ENST00000428438.1
ENST00000430384.5
ENST00000430843.5
ENST00000431913.5
ENST00000431966.5
ENST00000432428.5
ENST00000436025.1
ENST00000436197.5
ENST00000436822.6
ENST00000437093.5
ENST00000438134.5
ENST00000438162.5
ENST00000439376.5
ENST00000439396.5
ENST00000439743.1
ENST00000442932.5
ENST00000444068.5
ENST00000444497.5
ENST00000444632.6
ENST00000445319.5
ENST00000445383.5
ENST00000445669.5
ENST00000445853.5
ENST00000446072.5
ENST00000454249.5
ENST00000454773.5
ENST00000454845.1
ENST00000455034.5
ENST00000456042.5
ENST00000456844.1
ENST00000457133.5
ENST00000457733.5
ENST00000458306.1
ENST00000459887.5
ENST00000460694.5
ENST00000463435.5
ENST00000463572.5
ENST00000465796.1
ENST00000466680.5
ENST00000470163.5
ENST00000470643.5
ENST00000474138.1
ENST00000475936.5
ENST00000476576.5
ENST00000476729.5
ENST00000479358.1
ENST00000480605.1
ENST00000481843.5
ENST00000482241.1
ENST00000482522.5
ENST00000482675.5
ENST00000484168.1
ENST00000484797.5
ENST00000487376.5
ENST00000487385.5
ENST00000490802.5
ENST00000491057.5
ENST00000492441.5
ENST00000493620.5
ENST00000495886.1
ENST00000496175.5
CDS CAA 72 bp CTGATGCCCATGTTGACCAGGTCTGAGGAGGCCACTTaGAAAACCTGTTCTGAGAATTTCTGCCTGTCCTTA +
Preference number: 6 (lower is better)
Translates to: LMPMLTRSEEAT*KTCSENFCLSL
Trigger: TAAGGACAGGCAGAAATTCTCAGAACAGGTTTTCAAAGTGGCCTCCTCAGACCTGGTCAACATGGGCATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 70 transcripts:
ENST00000376389.8
ENST00000383382.8
ENST00000383562.8
ENST00000411848.1
ENST00000411944.5
ENST00000413165.5
ENST00000416018.5
ENST00000416389.5
ENST00000421565.5
ENST00000422636.5
ENST00000422714.5
ENST00000424683.5
ENST00000428438.1
ENST00000430384.5
ENST00000430843.5
ENST00000431913.5
ENST00000431966.5
ENST00000432428.5
ENST00000436025.1
ENST00000436197.5
ENST00000436822.6
ENST00000437093.5
ENST00000438162.5
ENST00000439376.5
ENST00000439743.1
ENST00000442932.5
ENST00000444068.5
ENST00000444497.5
ENST00000444632.6
ENST00000445319.5
ENST00000445383.5
ENST00000445669.5
ENST00000445853.5
ENST00000446072.5
ENST00000454249.5
ENST00000454773.5
ENST00000454845.1
ENST00000456042.5
ENST00000456844.1
ENST00000457133.5
ENST00000457733.5
ENST00000458306.1
ENST00000459887.5
ENST00000460694.5
ENST00000463435.5
ENST00000463572.5
ENST00000465796.1
ENST00000466680.5
ENST00000470163.5
ENST00000470643.5
ENST00000474138.1
ENST00000475936.5
ENST00000476576.5
ENST00000476729.5
ENST00000479358.1
ENST00000480605.1
ENST00000481843.5
ENST00000482241.1
ENST00000482522.5
ENST00000482675.5
ENST00000484168.1
ENST00000484797.5
ENST00000487376.5
ENST00000487385.5
ENST00000490802.5
ENST00000491057.5
ENST00000492441.5
ENST00000493620.5
ENST00000495886.1
ENST00000496175.5