RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FLNC (Homo sapiens)

Ensembl gene IDs: ENSG00000128591

Ensembl transcript IDs: ENST00000325888.13, ENST00000346177.6, ENST00000388853.3

Found 847 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGTGAGAGAGAAATCAGGCCCCCTGGGAGCCTGGCTTGGGTGGAGTaGACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGG +
Preference number: 1 (lower is better)
Translates to: SEREIRPPGSLAWVE*TSLRPVHVPGHSCW
Trigger: CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAGGCTCCCAGGGGGCCTGATTTCTCTCTCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
3UTR GCA 90 bp AGGGTGACCTCACACACAGACACCCACAACACAATGCTCCCCCACTaGTCAGCCCCGCCAGAAACTCAGGGCTTCCCTGGCCTCGCAGCC +
Preference number: 1 (lower is better)
Translates to: RVTSHTDTHNTMLPH*SAPPETQGFPGLAA
Trigger: GGCTGCGAGGCCAGGGAAGCCCTGAGTTTCTGGCGGGGCTGAGCAGTGGGGGAGCATTGTGTTGTGGGTGTCTGTGTGTGAGGTCACCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
3UTR CCA 90 bp GAGACAGTGAGAGAGAAATCAGGCCCCCTGGGAGCCTGGCTTGGGTaGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCT +
Preference number: 1 (lower is better)
Translates to: ETVREKSGPLGAWLG*SAHRSGRSMCQATP
Trigger: AGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAGGCTCCCAGGGGGCCTGATTTCTCTCTCACTGTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
3UTR CCA 90 bp AAAAGAGACAGTGAGAGAGAAATCAGGCCCCCTGGGAGCCTGGCTTaGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCAC +
Preference number: 1 (lower is better)
Translates to: KRDSEREIRPPGSLA*VECTSLRPVHVPGH
Trigger: GTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAGGCTCCCAGGGGGCCTGATTTCTCTCTCACTGTCTCTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
3UTR CCA 90 bp TCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCTaGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGT +
Preference number: 1 (lower is better)
Translates to: SPPRQVFVVSDSVRV*VWHICVCVCVCVMC
Trigger: ACACATTACACACACACACACACACACACAAATGTGCCACACCCAGACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
3UTR-3UTR CCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGAACTCAGGGCTTCCCTaGCCTCGCAGCCCTCGCCAG +
Preference number: 2 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLNSGLP*PRSPRQ
Trigger: CTGGCGAGGGCTGCGAGGCCAGGGAAGCCCTGAGTT...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
3UTR-3UTR CCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGGGTCAGGAGGGTATCTaGCCGGCGGTGCAGTTTGAG +
Preference number: 2 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLGQEGI*PAVQFE
Trigger: CTCAAACTGCACCGCCGGCCAGATACCCTCCTGACC...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
3UTR-3UTR GCA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGACACCCACAACACAATaGTCCCCCACTGCTCAGCCC +
Preference number: 2 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQTPTTQ*SPTAQP
Trigger: GGGCTGAGCAGTGGGGGAGCATTGTGTTGTGGGTGT...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
3UTR CAA 90 bp GACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTaGAGGGTGACCTCACACACAGACACCCACAACACAATGCTCCCC +
Preference number: 2 (lower is better)
Translates to: DQVLGVRRVSGRRCS*RVTSHTDTHNTMLP
Trigger: GGGGAGCATTGTGTTGTGGGTGTCTGTGTGTGAGGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
3UTR-3UTR TCA 90 bp GCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGGTGTTTGTAGTGTCTaGTTCTGTGCGTGTCTGGGT +
Preference number: 2 (lower is better)
Translates to: ATRETRPSPRGQEGIWPAGVCSV*FCACLG
Trigger: ACCCAGACACGCACAGAATCAGACACTACAAACACC...CGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
3UTR-3UTR TCA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCGGTGTTTGTAGTGTCTaGTTCTGTGCGTGTCTGGGT +
Preference number: 2 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTGVCSV*FCACLG
Trigger: ACCCAGACACGCACAGAATCAGACACTACAAACACC...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
3UTR-3UTR CCA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCAACTCAGGGCTTCCCTaGCCTCGCAGCCCTCGCCAG +
Preference number: 2 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSNSGLP*PRSPRQ
Trigger: CTGGCGAGGGCTGCGAGGCCAGGGAAGCCCTGAGTT...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
3UTR-3UTR CCA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCGGTCAGGAGGGTATCTaGCCGGCGGTGCAGTTTGAG +
Preference number: 2 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSGQEGI*PAVQFE
Trigger: CTCAAACTGCACCGCCGGCCAGATACCCTCCTGACC...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
3UTR-3UTR CCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCGGAGCCTGGCTTGGGTaGAGTGCACATCGCTCAGGC +
Preference number: 2 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCGAWLG*SAHRSG
Trigger: GCCTGAGCGATGTGCACTCCACCCAAGCCAGGCTCC...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
3UTR-3UTR CCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACAAGAAATCAGGCCCCCTaGGAGCCTGGCTTGGGTGGA +
Preference number: 2 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTRNQAP*EPGLGG
Trigger: TCCACCCAAGCCAGGCTCCCAGGGGGCCTGATTTCT...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
3UTR-3UTR GCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACAACAATGCTCCCCCACTaGTCAGCCCCGCCAGAAACT +
Preference number: 2 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTTMLPH*SAPPET
Trigger: AGTTTCTGGCGGGGCTGAGCAGTGGGGGAGCATTGT...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
3UTR-3UTR GCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCACAATGCTCCCCCACTaGTCAGCCCCGCCAGAAACT +
Preference number: 2 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCTMLPH*SAPPET
Trigger: AGTTTCTGGCGGGGCTGAGCAGTGGGGGAGCATTGT...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
3UTR-3UTR GCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCGTATCTGGCCGGCGGTaGAGTTTGAGGGTGACCTCA +
Preference number: 2 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCVSGRR*SLRVTS
Trigger: TGAGGTCACCCTCAAACTGCACCGCCGGCCAGATAC...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
3UTR GCA 72 bp GAAATCAGGCCCCCTGGGAGCCTGGCTTGGGTGGAGTaGACATCGCTCAGGCCGGTCCATGTGCCAGGCCAC +
Preference number: 3 (lower is better)
Translates to: EIRPPGSLAWVE*TSLRPVHVPGH
Trigger: GTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAGGCTCCCAGGGGGCCTGATTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
3UTR CCA 72 bp GAGACAGTGAGAGAGAAATCAGGCCCCCTGGGAGCCTaGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCC +
Preference number: 3 (lower is better)
Translates to: ETVREKSGPLGA*LGWSAHRSGRS
Trigger: GGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAGGCTCCCAGGGGGCCTGATTTCTCTCTCACTGTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
3UTR-3UTR CAA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTGGCCGGCGGTGCAGTTaGAGGGTGACCTCACACACA +
Preference number: 3 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSGRRCS*RVTSHT
Trigger: TGTGTGTGAGGTCACCCTCAAACTGCACCGCCGGCC...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
3UTR CCA 72 bp GAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTaGCCGGCGGTGCAGTTTGAGGGTGACCTCACACAC +
Preference number: 3 (lower is better)
Translates to: ETRPSPRGQEGI*PAVQFEGDLTH
Trigger: GTGTGTGAGGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
3UTR GCA 72 bp TCACACACAGACACCCACAACACAATGCTCCCCCACTaGTCAGCCCCGCCAGAAACTCAGGGCTTCCCTGGC +
Preference number: 3 (lower is better)
Translates to: SHTDTHNTMLPH*SAPPETQGFPG
Trigger: GCCAGGGAAGCCCTGAGTTTCTGGCGGGGCTGAGCAGTGGGGGAGCATTGTGTTGTGGGTGTCTGTGTGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
3UTR-3UTR CAA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGACTGGGTGTGGCACATTaGTGTGTGTGTGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGLGVAH*CVCVCV
Trigger: CACACACACACACACACACAAATGTGCCACACCCAG...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
3UTR-3UTR CAA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCCTGGGTGTGGCACATTaGTGTGTGTGTGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSLGVAH*CVCVCV
Trigger: CACACACACACACACACACAAATGTGCCACACCCAG...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
3UTR TCA 72 bp CTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTaGTTCTGTGCGTGTCTGGGTGTGGCACATTTGTGT +
Preference number: 3 (lower is better)
Translates to: LHFTPKAGVCSV*FCACLGVAHLC
Trigger: ACACAAATGTGCCACACCCAGACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGCCACCCTCCAGGCCTaGCCCGAAGGCTCGGACGCG +
Preference number: 4 (lower is better)
Translates to: ATRETRPSPRGQEGIWPAATLQA*PEGSDA
Trigger: CGCGTCCGAGCCTTCGGGCCAGGCCTGGAGGGTGGC...CGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CTGGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCGGGTCCCCGCCGACCTaGGTGGACTCCTCCACCCGC +
Preference number: 4 (lower is better)
Translates to: LAWVECTSLRPVHVPGHSGSPPT*VDSSTR
Trigger: GCGGGTGGAGGAGTCCACCCAGGTCGGCGGGGACCC...GGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCGGATGCCAGAGGCGTTaGGGCCTGGGCCGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTGCQRR*GLGRWP
Trigger: GGGCCAGCGGCCCAGGCCTCAACGCCTCTGGCATCC...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCCCGGGTCCAGATGCTaGACTCGGCTGGCACGCCGG +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLPGSRC*TRLARR
Trigger: CCGGCGTGCCAGCCGAGTTCAGCATCTGGACCCGGG...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGCCCGCTCGGGGTGGCTaGCCTCGCCCACGTTCACCC +
Preference number: 4 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQPARGG*PRPRSP
Trigger: GGGTGAACGTGGGCGAGGGCAGCCACCCCGAGCGGG...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CTGGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCCGCCTGGCTCCAGCTTaGAGGGGATGGGCCGGCGAG +
Preference number: 4 (lower is better)
Translates to: LAWVECTSLRPVHVPGHSRLAPA*RGWAGE
Trigger: CTCGCCGGCCCATCCCCTGCAAGCTGGAGCCAGGCG...GGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCGCCTGGCTCCAGCTTaGAGGGGATGGGCCGGCGAG +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLRLAPA*RGWAGE
Trigger: CTCGCCGGCCCATCCCCTGCAAGCTGGAGCCAGGCG...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGCCCAGCACAGCCACCTaGAGGGGCGCCCGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRPSTAT*RGARPA
Trigger: AGCTGGCCGGGCGCCCCTGCAGGTGGCTGTGCTGGG...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGGCTGTCGGGCGCTGTTaGGGCGCGACCACGGGACTC +
Preference number: 4 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWAVGRC*GATTGL
Trigger: GAGTCCCGTGGTCGCGCCCCAACAGCGCCCGACAGC...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGGGTCCCCGCCGACCTaGGTGGACTCCTCCACCCGC +
Preference number: 4 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRGSPPT*VDSSTR
Trigger: GCGGGTGGAGGAGTCCACCCAGGTCGGCGGGGACCC...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGCGCCTGGGGCGCACTTaGTGCCGATGCTCACGTCGC +
Preference number: 4 (lower is better)
Translates to: ATRETRPSPRGQEGIWPARLGRT*CRCSRR
Trigger: GCGACGTGAGCATCGGCATCAAGTGCGCCCCAGGCG...CGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CTGGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCGCCCTCCACGGCCAGTaGCAGACCCCCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LAWVECTSLRPVHVPGHSALHGQ*QTPFSS
Trigger: GCTGGAGAAGGGGGTCTGTCACTGGCCGTGGAGGGC...GGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGCGCCCCGCGTCTTGCTaGTCTCCGTGCGCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRRPASC*SPCAPC
Trigger: GCACGGAGCGCACGGAGATCAGCAAGACGCGGGGCG...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCAGTCGTCGGCCTGCTaGATGGCCTCCCGGGCGTTC +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLQSSAC*MASRAF
Trigger: GAACGCCCGGGAGGCCATGCAGCAGGCCGACGACTG...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGGCAGGGCTCCTCGTTaGCCGAGGGGGCACGGATGC +
Preference number: 4 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRGRAPR*PRGHGC
Trigger: GCATCCGTGCCCCCTCGGGCAACGAGGAGCCCTGCC...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGCGCACGCTCACCACGTaGTCCCCGACCTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWRTLTT*SPTSLG
Trigger: CCCCAAGGAGGTCGGGGAGCACGTGGTGAGCGTGCG...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCGCTGTCGGGCGCTGTTaGGGCGCGACCACGGGACTC +
Preference number: 4 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTAVGRC*GATTGL
Trigger: GAGTCCCGTGGTCGCGCCCCAACAGCGCCCGACAGC...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CTGGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCCCACTGGCTCCTCTGTaGCCCAGTGTGTGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: LAWVECTSLRPVHVPGHSPLAPL*PSVWGG
Trigger: CCCGCCCCACACACTGGGCCACAGAGGAGCCAGTGG...GGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325888.13
CDS-3UTR CCA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGCCCCGCCGACCTGGGTaGACTCCTCCACCCGCACCT +
Preference number: 4 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRPRRPG*TPPPAP
Trigger: AGGTGCGGGTGGAGGAGTCCACCCAGGTCGGCGGGG...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CTGGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCGCTGGCCACGGTACTTaGCAGCGACCGTATGGGGCC +
Preference number: 4 (lower is better)
Translates to: LAWVECTSLRPVHVPGHSAGHGT*QRPYGA
Trigger: GGCCCCATACGGTCGCTGTCAAGTACCGTGGCCAGC...GGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGCTGGCTGGTTCACCTTaGGCCCCGTCTCCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: ATRETRPSPRGQEGIWPALAGSP*APSPGG
Trigger: GCCTCCAGGAGACGGGGCTCAAGGTGAACCAGCCAG...CGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGGGGCGCCCAGAGCTTTaGCGTCCTGCCAGTCACGGT +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLGRPEL*RPASHG
Trigger: ACCGTGACTGGCAGGACGGCAAAGCTCTGGGCGCCC...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGATGCTCACGTCGCCTTaGCCCGCCTCGCTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWMLTSP*PASLQS
Trigger: GGACTGCAGCGAGGCGGGGCAAGGCGACGTGAGCAT...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCCCCAGCACAGCCACCTaGAGGGGCGCCCGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLAPSTAT*RGARPA
Trigger: AGCTGGCCGGGCGCCCCTGCAGGTGGCTGTGCTGGG...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCCCGAGGGGGCACGGATaGTGGCGGTCAGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTPRGHG*WRSAGS
Trigger: TGAGCCAGCTGACCGCCAGCATCCGTGCCCCCTCGG...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCCCAGACCCGCACCTTaGTGGCGTCCCCGATCTCAG +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLPRPAP*WRPRSQ
Trigger: CTGAGATCGGGGACGCCAGCAAGGTGCGGGTCTGGG...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGTCTCCGTGCGCTCCGTaGGGGTGTAGGTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLSPCAP*GCRCGC
Trigger: GCAGCCACACCTACACCCGCACGGAGCGCACGGAGA...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGTCTCCACGGGCTGGTTaGGGTCCCAGGCCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLSPRAG*GPRPPS
Trigger: ACTGGGAGGCCTGGGACCCCAACCAGCCCGTGGAGA...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGGCGTTCTCCACGGGCTaGTTGGGGTCCCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQAFSTG*LGSQAS
Trigger: GGAGGCCTGGGACCCCAACCAGCCCGTGGAGAACGC...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGCGTCGGCCTGCTGCATaGCCTCCCGGGCGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRRRPAA*PPGRSP
Trigger: TGGAGAACGCCCGGGAGGCCATGCAGCAGGCCGACG...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTCCCGCCGGCCCTGTaGGTCCACGATCACCACAGC +
Preference number: 4 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRVPPAL*VHDHHS
Trigger: GCTGTGGTGATCGTGGACCCACAGGGCCGGCGGGAC...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGTCACGCGAACACCCTTaGGCTGCAGGCCTCGCCCAG +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLSREHP*AAGLAQ
Trigger: CTGGGCGAGGCCTGCAGCCCAAGGGTGTTCGCGTGA...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CTGGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCACTCCCCAGGCTCCGTaGGCCAGTACCGCACATCGC +
Preference number: 4 (lower is better)
Translates to: LAWVECTSLRPVHVPGHSTPQAP*ASTAHR
Trigger: GCGATGTGCGGTACTGGCCCACGGAGCCTGGGGAGT...GGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CTGGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTTTACCCGCTCGGGGTaGCTGCCCTCGCCCACGTTC +
Preference number: 4 (lower is better)
Translates to: LAWVECTSLRPVHVPGHSFTRSG*LPSPTF
Trigger: GAACGTGGGCGAGGGCAGCCACCCCGAGCGGGTAAA...GGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGCCAGCTTGCAGGGGATaGGCCGGCGAGAGGGCGAAG +
Preference number: 4 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRPACRG*AGERAK
Trigger: CTTCGCCCTCTCGCCGGCCCATCCCCTGCAAGCTGG...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGCCACCGTCTGCACGGTaGAGTGGGCAGGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQPPSAR*SGQAAA
Trigger: TGCTGCAGCCTGCCCACTTCACCGTGCAGACGGTGG...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CTGGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCCAGGCCCTGAGACCTTaGCGCCACTGGTATCGACCG +
Preference number: 4 (lower is better)
Translates to: LAWVECTSLRPVHVPGHSQALRP*RHWYRP
Trigger: CGGTCGATACCAGTGGCGTCAAGGTCTCAGGGCCTG...GGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGCCAAGATCTGGACAGTaGGCAACCCCTCGCCCGCGT +
Preference number: 4 (lower is better)
Translates to: ATRETRPSPRGQEGIWPAPRSGQ*ATPRPR
Trigger: ACGCGGGCGAGGGGTTGCTCACTGTCCAGATCTTGG...CGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGTCCGCACCTCTCCTGTaGGCTCCCCTTTCTGCACCG +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLSAPLL*APLSAP
Trigger: CGGTGCAGAAAGGGGAGCTCACAGGAGAGGTGCGGA...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCCCTGTCTCCGCCGGGTaGTGCTCTCCTTCATGCGGC +
Preference number: 4 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTPVSAG*CSPSCG
Trigger: GCCGCATGAAGGAGAGCATCACCCGGCGGAGACAGG...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCCGCCCCGCGTCTTGCTaGTCTCCGTGCGCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLARPASC*SPCAPC
Trigger: GCACGGAGCGCACGGAGATCAGCAAGACGCGGGGCG...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCCGGGACTCGCTGCGCTaGGCTGCTCTCCTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTRDSLR*AALLSN
Trigger: GTTGGAGAGGAGAGCAGCGCAGCGCAGCGAGTCCCG...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTCGCTGAGGTCGCGCTaGAGGTCGGTCAGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQSLRSR*RSVRRL
Trigger: CAAGCGCCTGACCGACCTGCAGCGCGACCTCAGCGA...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCAGCCAAGCAGCCGCTaGTTGGGCGTCTGTTTGCGG +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLQPSSR*LGVCLR
Trigger: CCGCAAACAGACGCCCAAGCAGCGGCTGCTTGGCTG...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGCAGCCAAGCAGCCGCTaGTTGGGCGTCTGTTTGCGG +
Preference number: 4 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWQPSSR*LGVCLR
Trigger: CCGCAAACAGACGCCCAAGCAGCGGCTGCTTGGCTG...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTGCCCTGTGGCTCGATaGCAGGCCCATAGGCGATGG +
Preference number: 4 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWCPVAR*QAHRRW
Trigger: CCATCGCCTATGGGCCTGGCATCGAGCCACAGGGCA...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGCTGCAGCACGGTGTTaGCCTGTGGCTCGATGCCAG +
Preference number: 4 (lower is better)
Translates to: ATRETRPSPRGQEGIWPAAAARC*PVARCQ
Trigger: CTGGCATCGAGCCACAGGGCAACACCGTGCTGCAGC...CGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CTGGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCGCTGCAGCACGGTGTTaGCCTGTGGCTCGATGCCAG +
Preference number: 4 (lower is better)
Translates to: LAWVECTSLRPVHVPGHSAAARC*PVARCQ
Trigger: CTGGCATCGAGCCACAGGGCAACACCGTGCTGCAGC...GGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCAGCAACATCGCCAGTaGCGGCCCCCGCAGTGTAGA +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLQQHRQ*RPPQCR
Trigger: TCTACACTGCGGGGGCCGGCACTGGCGATGTTGCTG...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGCCCGCAAAGGCCACATaGACGGTATGTGGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: ATRETRPSPRGQEGIWPAPAKAT*TVCGPS
Trigger: GGAGGGGCCACATACCGTGCATGTGGCCTTTGCGGG...CGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGGTCAATGTCAGCCTCTaGAGGGCCCACCACGCCTGG +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLVNVSL*RAHHAW
Trigger: CCAGGCGTGGTGGGCCCTGCAGAGGCTGACATTGAC...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGCGCTGGCCCGCACCTTaGTGGCATCATGAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: ATRETRPSPRGQEGIWPARWPAP*WHHELG
Trigger: TCCCAGCTCATGATGCCAGCAAGGTGCGGGCCAGCG...CGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGGGCTGTTGGGGATGTaGTCACCCCCGAAGCGGATG +
Preference number: 4 (lower is better)
Translates to: ATRETRPSPRGQEGIWPAGLLGM*SPPKRM
Trigger: CATCCGCTTCGGGGGTGAGCACATCCCCAACAGCCC...CGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGGGTGATGTTGGGCCGTaGCGTCTTCCCCGAGGGCAT +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLGDVGP*RLPRGH
Trigger: ATGCCCTCGGGGAAGACGGCACGGCCCAACATCACC...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTCCGAGGGGGCACGGATaGTGGCGGTCAGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSPRGHG*WRSAGS
Trigger: TGAGCCAGCTGACCGCCAGCATCCGTGCCCCCTCGG...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGCCCAGACCCGCACCTTaGTGGCGTCCCCGATCTCAG +
Preference number: 4 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQPRPAP*WRPRSQ
Trigger: CTGAGATCGGGGACGCCAGCAAGGTGCGGGTCTGGG...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGCCTCGGAAAGCCCCTTaGCCCAGACCCGCACCTTGC +
Preference number: 4 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRPRKAP*PRPAPC
Trigger: GCAAGGTGCGGGTCTGGGGCAAGGGGCTTTCCGAGG...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCCCTCGGAAAGCCCCTTaGCCCAGACCCGCACCTTGC +
Preference number: 4 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTPRKAP*PRPAPC
Trigger: GCAAGGTGCGGGTCTGGGGCAAGGGGCTTTCCGAGG...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCTCTCCGTGCGCTCCGTaGGGGTGTAGGTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTSPCAP*GCRCGC
Trigger: GCAGCCACACCTACACCCGCACGGAGCGCACGGAGA...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCGCCTCACCCTCCTGCTaGCGGGTGATGCTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTASPSC*RVMLPK
Trigger: CTTCGGCAGCATCACCCGGCAGCAGGAGGGTGAGGC...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGCTGCGGCTTCCACCTTaGCCGATGGGCTGGTCACCT +
Preference number: 4 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWLRLPP*PMGWSP
Trigger: AGGTGACCAGCCCATCGGGCAAGGTGGAAGCCGCAG...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGCGGCTTCCACCTTaGCCGATGGGCTGGTCACCT +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLLRLPP*PMGWSP
Trigger: AGGTGACCAGCCCATCGGGCAAGGTGGAAGCCGCAG...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CTGGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCGCCCTCGACGATCTCTaGGGCTTCCACCTTGCCCGA +
Preference number: 4 (lower is better)
Translates to: LAWVECTSLRPVHVPGHSALDDL*GFHLAR
Trigger: TCGGGCAAGGTGGAAGCCGCAGAGATCGTCGAGGGC...GGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGCCCTCGACGATCTCTaGGGCTTCCACCTTGCCCGA +
Preference number: 4 (lower is better)
Translates to: ATRETRPSPRGQEGIWPAALDDL*GFHLAR
Trigger: TCGGGCAAGGTGGAAGCCGCAGAGATCGTCGAGGGC...CGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCCGGGCACCGTTCAGCTaGACGGCAAAGGACGCTGGC +
Preference number: 4 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTRAPFS*TAKDAG
Trigger: GCCAGCGTCCTTTGCCGTGCAGCTGAACGGTGCCCG...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTCGTCGGCCTGCTGCATaGCCTCCCGGGCGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSRRPAA*PPGRSP
Trigger: TGGAGAACGCCCGGGAGGCCATGCAGCAGGCCGACG...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGTCAGGGGCAATGACCTaGGGCACCCCAAGCCAGTCG +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLSGAMT*GTPSQS
Trigger: CGACTGGCTTGGGGTGCCCCAGGTCATTGCCCCTGA...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTCACGCGAACACCCTTaGGCTGCAGGCCTCGCCCAG +
Preference number: 4 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQSREHP*AAGLAQ
Trigger: CTGGGCGAGGCCTGCAGCCCAAGGGTGTTCGCGTGA...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGTGGGAAGCAGTCAGGTaGGGCGGGCAGGATGTGGGC +
Preference number: 4 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRWEAVR*GGQDVG
Trigger: GCCCACATCCTGCCCGCCCCACCTGACTGCTTCCCA...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGCCCGGAAGGGGCTCTTaGGCACGTTTACGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQPGRGS*ARLRLP
Trigger: GGGGAGGCGTAAACGTGCCCAAGAGCCCCTTCCGGG...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGGGGTCCACCTTGATGTaGAAGGGGCTGGCGGGGATC +
Preference number: 4 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWGSTLM*KGLAGI
Trigger: GATCCCCGCCAGCCCCTTCCACATCAAGGTGGACCC...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCCGCTCCACCGCCTaGCTCCAGCTTGCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWFRSTA*LQLAGD
Trigger: ATCCCCTGCAAGCTGGAGCCAGGCGGTGGAGCGGAA...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CTGGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCGGGCCCGTCAGTGGCTaGGGTGTAGTGGACAGTGTG +
Preference number: 4 (lower is better)
Translates to: LAWVECTSLRPVHVPGHSGPVSG*GVVDSV
Trigger: CACACTGTCCACTACACCCCAGCCACTGACGGGCCC...GGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTAGAGGCGTTGAGGCCTaGGCCGCTGGCCCGCACCTT +
Preference number: 4 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSRGVEA*AAGPHL
Trigger: AAGGTGCGGGCCAGCGGCCCAGGCCTCAACGCCTCT...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGAGGGGGCACGGATGCTaGCGGTCAGCTGGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLRGHGC*RSAGSD
Trigger: ATCTGAGCCAGCTGACCGCCAGCATCCGTGCCCCCT...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTGCCGATGGTGGCGATaGAAGGTGCCTGTCTCCGCC +
Preference number: 4 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWCRWWR*KVPVSA
Trigger: GGCGGAGACAGGCACCTTCCATCGCCACCATCGGCA...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGCCTGGGAGCCTGGCTTaGGTGGAGTGCACATCGCTC +
Preference number: 4 (lower is better)
Translates to: ATRETRPSPRGQEGIWPAPGSLA*VECTSL
Trigger: GAGCGATGTGCACTCCACCCAAGCCAGGCTCCCAGG...CGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGGCCGAGGCCGGCGTCTaGGTAGCCGCTGTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQAEAGV*VAAVVH
Trigger: ATGAACAACAGCGGCTACTCAGACGCCGGCCTCGGC...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGCTTGCCCACGCACTTaGGGTGCTCATTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: ATRETRPSPRGQEGIWPAACPRT*GAHCTS
Trigger: GCTGGTGCAATGAGCACCTCAAGTGCGTGGGCAAGC...CGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGGCTTGCCCACGCACTTaGGGTGCTCATTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLACPRT*GAHCTS
Trigger: GCTGGTGCAATGAGCACCTCAAGTGCGTGGGCAAGC...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGAAGGGACTGCGGGTaGTGGGGGCACCCGCAAAGG +
Preference number: 4 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLAGRDCG*WGHPQR
Trigger: CCTTTGCGGGTGCCCCCATCACCCGCAGTCCCTTCC...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTACCAGTCCACCCTTaGGACCCGGGCCATAAGCAC +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLLPVHP*DPGHKH
Trigger: GTGCTTATGGCCCGGGTCTCAAGGGTGGACTGGTAG...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCCGTGGGCAGGTAGCTaGCAGCACATGAGCCATCAC +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLPWAGS*QHMSHH
Trigger: GTGATGGCTCATGTGCTGTCAGCTACCTGCCCACGG...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCTGGCCCCCGAGGGGTTaGGCACACGAGCCGTCACGT +
Preference number: 4 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLAWPPRG*AHEPSR
Trigger: ACGTGACGGCTCGTGTGCTCAACCCCTCGGGGGCCA...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGCCTGGTCAGCATACTTaGCGGCTACCGTGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWPGQHT*RLPCRA
Trigger: GGCCCTACACGGTAGCCGTCAAGTATGCTGACCAGG...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGTCCGCACCTCTCCTGTaGGCTCCCCTTTCTGCACCG +
Preference number: 4 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRSAPLL*APLSAP
Trigger: CGGTGCAGAAAGGGGAGCTCACAGGAGAGGTGCGGA...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGCGTCCTTGTTGTCGGTaGTGTTGGGCCGTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWRPCCR*CWAVPS
Trigger: AGACGGCACGGCCCAACATCACCGACAACAAGGACG...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTCGGTGATCTTCAGTaGCACGTCCGTGGAGGTGCC +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLLGDLQ*HVRGGA
Trigger: GGCACCTCCACGGACGTGTCACTGAAGATCACCGAG...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGTGTGCAGTCATGTCCTaGGAGCTGGCCTCACCCTCC +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLCAVMS*ELASPS
Trigger: GGAGGGTGAGGCCAGCTCTCAGGACATGACTGCACA...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTCTGGCTGGTTCACCTTaGGCCCCGTCTCCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSLAGSP*APSPGG
Trigger: GCCTCCAGGAGACGGGGCTCAAGGTGAACCAGCCAG...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTGCCCTGTGGCTCGATaGCAGGCCCATAGGCGATGG +
Preference number: 4 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQCPVAR*QAHRRW
Trigger: CCATCGCCTATGGGCCTGGCATCGAGCCACAGGGCA...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGCGACTTCCACACCTGTaGGATTCAGCCCAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: ATRETRPSPRGQEGIWPARLPHL*DSAQGP
Trigger: AGGGCCCTGGGCTGAATCGCACAGGTGTGGAAGTCG...CGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCGTATCGACCGCAGGCTaGACATGGACACGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTVSTAG*TWTRVG
Trigger: CCCCACCCGTGTCCATGTGCAGCCTGCGGTCGATAC...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGAGCCGTCACGTGGTTaGCGCCTGTGGCTGTTAGGG +
Preference number: 4 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLREPSRG*RLWLLG
Trigger: CCCTAACAGCCACAGGCGGCAACCACGTGACGGCTC...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CTGGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCCTTCCCCTCACCGGCTaGCTTGGCATCCACCGTGAT +
Preference number: 4 (lower is better)
Translates to: LAWVECTSLRPVHVPGHSLPLTG*LGIHRD
Trigger: ATCACGGTGGATGCCAAGGCAGCCGGTGAGGGGAAG...GGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGCTTCCCCTCACCGGCTaGCTTGGCATCCACCGTGAT +
Preference number: 4 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWLPLTG*LGIHRD
Trigger: ATCACGGTGGATGCCAAGGCAGCCGGTGAGGGGAAG...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGATCCACATCGAGCTCTaGCCCATCCGGCGTGGACAC +
Preference number: 4 (lower is better)
Translates to: ATRETRPSPRGQEGIWPAIHIEL*PIRRGH
Trigger: GTGTCCACGCCGGATGGGGCAGAGCTCGATGTGGAT...CGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCGGTGATGTTGGGCCGTaGCGTCTTCCCCGAGGGCAT +
Preference number: 4 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTGDVGP*RLPRGH
Trigger: ATGCCCTCGGGGAAGACGGCACGGCCCAACATCACC...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCCGCACGCTCACCACGTaGTCCCCGACCTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLARTLTT*SPTSLG
Trigger: CCCCAAGGAGGTCGGGGAGCACGTGGTGAGCGTGCG...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CTGGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCCAGGCTTCCGACACATaGACAGGGAAGGGACTGCGG +
Preference number: 4 (lower is better)
Translates to: LAWVECTSLRPVHVPGHSQASDT*TGKGLR
Trigger: CCGCAGTCCCTTCCCTGTCCATGTGTCGGAAGCCTG...GGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGAGGCGCGGCAGGCGTTaGGGTTACAGGCTTCCGACA +
Preference number: 4 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQRRGRR*GYRLPT
Trigger: TGTCGGAAGCCTGTAACCCCAACGCCTGCCGCGCCT...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTCCCGCACCTTCACTaGCTCCTCTGTGCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLLPHLH*LLCALW
Trigger: CCAAAGGGCACAGAGGAGCCAGTGAAGGTGCGGGAG...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CTGGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCGTCAGCACCGTGAAGTaGGTGGGCTTCCCGACTTCC +
Preference number: 4 (lower is better)
Translates to: LAWVECTSLRPVHVPGHSVSTVK*VGFPTS
Trigger: GGAAGTCGGGAAGCCCACCCACTTCACGGTGCTGAC...GGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGCCACAAAGGGGCTCTTaGGGACAGGGTCCCCGCCAT +
Preference number: 4 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQPQRGS*GQGPRH
Trigger: ATGGCGGGGACCCTGTCCCCAAGAGCCCCTTTGTGG...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGCTGTGCCAGCCCCCTTaGTGTCGATGGAGAATGGCG +
Preference number: 4 (lower is better)
Translates to: ATRETRPSPRGQEGIWPALCQPP*CRWRMA
Trigger: CGCCATTCTCCATCGACACCAAGGGGGCTGGCACAG...CGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGCACGGGTGGGGAATTTaGGCACGGGATGCCCGCCAT +
Preference number: 4 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQHGWGI*ARDARH
Trigger: ATGGCGGGCATCCCGTGCCCAAATTCCCCACCCGTG...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTAGGCTCGGACGCGGGTaGGATCACAGCCCTCGGTCA +
Preference number: 4 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSRLGRG*DHSPRS
Trigger: TGACCGAGGGCTGTGATCCCACCCGCGTCCGAGCCT...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGCCACCCTCCAGGCCTaGCCCGAAGGCTCGGACGCG +
Preference number: 4 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGATLQA*PEGSDA
Trigger: CGCGTCCGAGCCTTCGGGCCAGGCCTGGAGGGTGGC...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGCACCACATCCTTCACTaGCACGCGGAACGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRHHILH*HAERAP
Trigger: GGGAGCCCGTTCCGCGTGCCAGTGAAGGATGTGGTG...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCCACCACATCCTTCACTaGCACGCGGAACGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTHHILH*HAERAP
Trigger: GGGAGCCCGTTCCGCGTGCCAGTGAAGGATGTGGTG...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGGTCTCCTGCCCAATCTaGATTCGAGGGCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLVSCPI*IRGPRQ
Trigger: CTGCCTGGGCCCTCGAATCCAGATTGGGCAGGAGAC...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGTCCCAATGTGCCGGTTaGGCAGGCGCTTCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRSQCAG*AGASAG
Trigger: GCCTGCTGAAGCGCCTGCCCAACCGGCACATTGGGA...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCTCCCAATGTGCCGGTTaGGCAGGCGCTTCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTSQCAG*AGASAG
Trigger: GCCTGCTGAAGCGCCTGCCCAACCGGCACATTGGGA...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCACAGGTGCTGCCGATaGTGGCGATGGAAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLHRCCR*WRWKVP
Trigger: AGGCACCTTCCATCGCCACCATCGGCAGCACCTGTG...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CTGGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCCACAGGTGCTGCCGATaGTGGCGATGGAAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: LAWVECTSLRPVHVPGHSHRCCR*WRWKVP
Trigger: AGGCACCTTCCATCGCCACCATCGGCAGCACCTGTG...GGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGTCATGTCCTGAGAGCTaGCCTCACCCTCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: ATRETRPSPRGQEGIWPASCPES*PHPPAA
Trigger: GGCAGCAGGAGGGTGAGGCCAGCTCTCAGGACATGA...CGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CTGGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCGCAAAGGACGCTGGCTaGTTCACCTTGAGCCCCGTC +
Preference number: 4 (lower is better)
Translates to: LAWVECTSLRPVHVPGHSAKDAG*FTLSPV
Trigger: GACGGGGCTCAAGGTGAACCAGCCAGCGTCCTTTGC...GGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTAACTCAGGGCTTCCCTaGCCTCGCAGCCCTCGCCAG +
Preference number: 4 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSNSGLP*PRSPRQ
Trigger: CTGGCGAGGGCTGCGAGGCCAGGGAAGCCCTGAGTT...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGGAGCCTGGCTTGGGTaGAGTGCACATCGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRGAWLG*SAHRSG
Trigger: GCCTGAGCGATGTGCACTCCACCCAAGCCAGGCTCC...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CTGGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCCTATGGACACGAGCTTaGTGTGCTCGCGCTCGAGGA +
Preference number: 4 (lower is better)
Translates to: LAWVECTSLRPVHVPGHSLWTRA*CARARG
Trigger: TCCTCGAGCGCGAGCACATCAAGCTCGTGTCCATAG...GGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGCGTAGCCGCCCCACGTaGTGGTCACCACATACTTCC +
Preference number: 4 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRRSRPT*WSPHTS
Trigger: GGAAGTATGTGGTGACCATCACGTGGGGCGGCTACG...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGCCTCATCGTCACAGATaGCGTGCACAGCGTACTCCC +
Preference number: 4 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWPHRHR*RAQRTP
Trigger: GGGAGTACGCTGTGCACGTCATCTGTGACGATGAGG...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGCCGTGGGCAGGTAGCTaGCAGCACATGAGCCATCAC +
Preference number: 4 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRPWAGS*QHMSHH
Trigger: GTGATGGCTCATGTGCTGTCAGCTACCTGCCCACGG...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTCAGGCCCTGAGACCTTaGCGCCACTGGTATCGACCG +
Preference number: 4 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSQALRP*RHWYRP
Trigger: CGGTCGATACCAGTGGCGTCAAGGTCTCAGGGCCTG...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGTCCACTGTGAAGGTCTaGGGAACCCGGGCCCTGACA +
Preference number: 4 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRSTVKV*GTRALT
Trigger: TGTCAGGGCCCGGGTTCCTCAGACCTTCACAGTGGA...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGCCTTGGCATCCACCGTaGTCACCGTCTCCTGCCCAA +
Preference number: 4 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRPWHPP*SPSPAQ
Trigger: TTGGGCAGGAGACGGTGATCACGGTGGATGCCAAGG...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGGGTTGCCGTCATACTTaGTCCCCATCTGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLGCRHT*SPSGAG
Trigger: GCCTGCACCAGATGGGGATCAAGTATGACGGCAACC...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGAGGTGGCTGGCTTGTTaGCCATGCCATGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRRWLAC*PCHGSG
Trigger: GCCTGAGCCATGGCATGGTCAACAAGCCAGCCACCT...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCCTCGGTGATCTTCAGTaGCACGTCCGTGGAGGTGCC +
Preference number: 4 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTLGDLQ*HVRGGA
Trigger: GGCACCTCCACGGACGTGTCACTGAAGATCACCGAG...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCCGGGACTCGCTGCGCTaGGCTGCTCTCCTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLARDSLR*AALLSN
Trigger: GTTGGAGAGGAGAGCAGCGCAGCGCAGCGAGTCCCG...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCATGCTCACGTCGCCTTaGCCCGCCTCGCTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLAMLTSP*PASLQS
Trigger: GGACTGCAGCGAGGCGGGGCAAGGCGACGTGAGCAT...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGCGACTTCCACACCTGTaGGATTCAGCCCAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQRLPHL*DSAQGP
Trigger: AGGGCCCTGGGCTGAATCGCACAGGTGTGGAAGTCG...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGCATCCAGCTTGGCCTTaGCGGCTCCCTTGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQHPAWP*RLPWSA
Trigger: TGCTGACCAAGGGAGCCGGCAAGGCCAAGCTGGATG...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGTGGGCAGAGCATGGATaGGGAAGGGCGAGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRWAEHG*GRASRG
Trigger: TCCCCTACTCGCCCTTCCGCATCCATGCTCTGCCCA...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCATCCACATCGAGCTCTaGCCCATCCGGCGTGGACAC +
Preference number: 4 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTIHIEL*PIRRGH
Trigger: GTGTCCACGCCGGATGGGGCAGAGCTCGATGTGGAT...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGAGGGCTCCTCCTCGTaGGGCAGGGGGTCACACGCC +
Preference number: 4 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGEGSSS*GRGSHA
Trigger: GGCGTGTGACCCCCTGCCGCACGAGGAGGAGCCCTC...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325888.13
CDS-3UTR GCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGACACGTCCGTGGAGGTaGCCACATTCAGCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLTRPWR*PHSAVR
Trigger: CCTCACAGCTGAATGTGGGCACCTCCACGGACGTGT...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGGGCTGTTGGTGACATaGTTGCCACTCTTGCGCACG +
Preference number: 4 (lower is better)
Translates to: ATRETRPSPRGQEGIWPAGLLVT*LPLLRT
Trigger: CGTGCGCAAGAGTGGCAAGCATGTCACCAACAGCCC...CGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CTGGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCACAATGCTCCCCCACTaGTCAGCCCCGCCAGAAACT +
Preference number: 4 (lower is better)
Translates to: LAWVECTSLRPVHVPGHSTMLPH*SAPPET
Trigger: AGTTTCTGGCGGGGCTGAGCAGTGGGGGAGCATTGT...GGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTGGGGTTCAGCTGCTTaGATCGAACAGGGGCACCAG +
Preference number: 4 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWWGSAA*IEQGHQ
Trigger: CTGGTGCCCCTGTTCGATCCAAGCAGCTGAACCCCA...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTCCTCTGTGCCCTTTaGCCCCTTGACCGTGACCTT +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLLLCAL*PLDRDL
Trigger: AAGGTCACGGTCAAGGGGCCAAAGGGCACAGAGGAG...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGCTCCTCTGTGCCCTTTaGCCCCTTGACCGTGACCTT +
Preference number: 4 (lower is better)
Translates to: ATRETRPSPRGQEGIWPALLCAL*PLDRDL
Trigger: AAGGTCACGGTCAAGGGGCCAAAGGGCACAGAGGAG...CGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGCTGGCGGGGATCTCCTaGTTGGCAAACAGCACCATG +
Preference number: 4 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWLAGIS*LANSTM
Trigger: CATGGTGCTGTTTGCCAACCAGGAGATCCCCGCCAG...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGCTGGCGGGGATCTCCTaGTTGGCAAACAGCACCATG +
Preference number: 4 (lower is better)
Translates to: ATRETRPSPRGQEGIWPALAGIS*LANSTM
Trigger: CATGGTGCTGTTTGCCAACCAGGAGATCCCCGCCAG...CGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGACTGCACATCCAGCTTaGCCTTGCCGGCTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRTAHPA*PCRLPW
Trigger: CCAAGGGAGCCGGCAAGGCCAAGCTGGATGTGCAGT...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGGCACAACCTCGCCCTTaGCTGTCCCTGCAAACTGCA +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLAQPRP*LSLQTA
Trigger: TGCAGTTTGCAGGGACAGCCAAGGGCGAGGTTGTGC...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTGGTGTCGATGGAGAATaGCGCGGGGGTGCCTACCAG +
Preference number: 4 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSGVDGE*RGGAYQ
Trigger: CTGGTAGGCACCCCCGCGCCATTCTCCATCGACACC...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CTGGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCCCATCCGCGTTGTTGTaGATCAGCACCTCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: LAWVECTSLRPVHVPGHSPSALL*ISTSAL
Trigger: CAAGGCCGAGGTGCTGATCCACAACAACGCGGATGG...GGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CTGGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCGCACATGGACACGGGTaGGGAATTTGGGCACGGGAT +
Preference number: 4 (lower is better)
Translates to: LAWVECTSLRPVHVPGHSAHGHG*GIWARD
Trigger: ATCCCGTGCCCAAATTCCCCACCCGTGTCCATGTGC...GGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGACCGCAGGCTGCACATaGACACGGGTGGGGAATTTG +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLTAGCT*TRVGNL
Trigger: CAAATTCCCCACCCGTGTCCATGTGCAGCCTGCGGT...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGACACGAGCCGTCACGTaGTTGCCGCCTGTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQTRAVT*LPPVAV
Trigger: AACAGCCACAGGCGGCAACCACGTGACGGCTCGTGT...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTTGAAGGGGCTGCGTaGCACCTCCTGGTCAGCATA +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLLEGAA*HLLVSI
Trigger: TATGCTGACCAGGAGGTGCCACGCAGCCCCTTCAAG...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCTGGCCCGCACCTTGCTaGCATCATGAGCTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTWPAPC*HHELGG
Trigger: TCCTCCCAGCTCATGATGCCAGCAAGGTGCGGGCCA...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGGGATGTTGGCCTTCTTaGGCTTACCCTCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWGCWPS*AYPRGP
Trigger: TGGACCCCGAGGGTAAGCCCAAGAAGGCCAACATCC...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCAGCATGGACTCCATTaGCTCCACAGGCACCACTGG +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLQHGLH*LHRHHW
Trigger: CCAGTGGTGCCTGTGGAGCCAATGGAGTCCATGCTG...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGAGACCCGCACCTTGCTaGCGTCCCCGATCTCAGATG +
Preference number: 4 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQRPAPC*RPRSQM
Trigger: CATCTGAGATCGGGGACGCCAGCAAGGTGCGGGTCT...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCTTGACAGCGACCGTATaGGGCCCCATTTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTLTATV*GPISWG
Trigger: GCCCCAGGAAATGGGGCCCCATACGGTCGCTGTCAA...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGGTCAGGAGGGTATCTaGCCGGCGGTGCAGTTTGAG +
Preference number: 4 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRGQEGI*PAVQFE
Trigger: CTCAAACTGCACCGCCGGCCAGATACCCTCCTGACC...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGCCAGGCCACTCCTGCTaGTTCGGGGGCTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWPGHSC*FGGCFL
Trigger: AAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGG...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTCTGTGGCCAGCACGTaGAAGGGGCTGTTGGGGATG +
Preference number: 4 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQSVAST*KGLLGM
Trigger: CATCCCCAACAGCCCCTTCCACGTGCTGGCCACAGA...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000346177.6
CDS-3UTR TCA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGAAGGGACTGCGGGTaGTGGGGGCACCCGCAAAGG +
Preference number: 4 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGGRDCG*WGHPQR
Trigger: CCTTTGCGGGTGCCCCCATCACCCGCAGTCCCTTCC...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCTGGGCTCATTGGCCTTaGGGCCTGTCTTCTCCACTC +
Preference number: 4 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTWAHWP*GLSSPL
Trigger: GAGTGGAGAAGACAGGCCTCAAGGCCAATGAGCCCA...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCTGGCAAACAGCACCATaGTGGTGTAGCGGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLAWQTAP*WCSGPP
Trigger: GGGCGGGCCGCTACACCATCATGGTGCTGTTTGCCA...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTAGGCAGGGCTGTAGGTaGTGTGGTAGGTGCCATCCG +
Preference number: 4 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSRQGCR*CGRCHP
Trigger: CGGATGGCACCTACCACATCACCTACAGCCCTGCCT...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTCTCAACACCAGGCCCTaGGACCTTGACGCCACTGGT +
Preference number: 4 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSLNTRP*DLDATG
Trigger: ACCAGTGGCGTCAAGGTCTCAGGGCCTGGTGTTGAG...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCATAGTCTCCAGGAGTaGAGGGGATGTACTCCACGG +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLHSLQE*RGCTPR
Trigger: CCGTGGAGTACATCCCCTTCACTCCTGGAGACTATG...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGGTGCATACCTCACCGTaGTGGTGCCGTCCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLVHTSP*WCRPCC
Trigger: ACAACAAGGACGGCACCATCACGGTGAGGTATGCAC...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CTGGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCGCCCACATTCAGCTGTaGGGTCCTCATGGAGTCATC +
Preference number: 4 (lower is better)
Translates to: LAWVECTSLRPVHVPGHSAHIQL*GPHGVI
Trigger: GATGACTCCATGAGGACCTCACAGCTGAATGTGGGC...GGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGGCCCACATTCAGCTGTaGGGTCCTCATGGAGTCATC +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLAHIQL*GPHGVI
Trigger: GATGACTCCATGAGGACCTCACAGCTGAATGTGGGC...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGTGCGAGTGTCCACGATaGACTCTGCCACCTGGAATG +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLCECPR*TLPPGM
Trigger: CATTCCAGGTGGCAGAGTTCATCGTGGACACTCGCA...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTTGTGCAGTCATGTCCTaGGAGCTGGCCTCACCCTCC +
Preference number: 4 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSCAVMS*ELASPS
Trigger: GGAGGGTGAGGCCAGCTCTCAGGACATGACTGCACA...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCATTCTCGTGGGGGATaGAGCGGATGGTGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLHSRGG*SGWCAC
Trigger: ACAAGCACACCATCCGCTTCATCCCCCACGAGAATG...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTCTCGCTGCGCTGCGCTaGTCTCCTCTCCAACTTCTC +
Preference number: 4 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSLAALR*SPLQLL
Trigger: GAGAAGTTGGAGAGGAGAGCAGCGCAGCGCAGCGAG...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGACCCGCGTCCACCGTCTaGACGGTGAAGTGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGPASTV*TVKWAG
Trigger: GCCTGCCCACTTCACCGTGCAGACGGTGGACGCGGG...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CTGGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGGCAGGTCTGTATGTaGAGCGGAACGTGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: LAWVECTSLRPVHVPGHSWQVCM*SGTCCH
Trigger: GTGACAGCACGTTCCGCTGCACATACAGACCTGCCA...GGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCCCCGCAAAGGCCACATaGACGGTATGTGGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLAPAKAT*TVCGPS
Trigger: GGAGGGGCCACATACCGTGCATGTGGCCTTTGCGGG...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGGCCCTTGGCTGTCCCTaGAAACTGCACATCCAGCTT +
Preference number: 4 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWALGCP*KLHIQL
Trigger: AAGCTGGATGTGCAGTTTGCAGGGACAGCCAAGGGC...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCGGCCAAGGCCCCCGGTaGCCGCTCCCCTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVGQGPR*PLPWSP
Trigger: TGGAGACCAGGGGAGCGGGCACCGGGGGCCTTGGCC...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTGTGAGCTCCCCTTTCTaGACCGCGAAGGGGATGACC +
Preference number: 4 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSVSSPF*TAKGMT
Trigger: GGTCATCCCCTTCGCGGTGCAGAAAGGGGAGCTCAC...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGGCTCCCCGGGATGTaGTTGTCATCGAAGCGCACG +
Preference number: 4 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLAGLPGM*LSSKRT
Trigger: CGTGCGCTTCGATGACAAGCACATCCCGGGGAGCCC...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGACACGTCCGTGGAGGTaGCCACATTCAGCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRTRPWR*PHSAVR
Trigger: CCTCACAGCTGAATGTGGGCACCTCCACGGACGTGT...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCCATGCTTGCCACTCTTaGGCACGCTCACCACGTGCT +
Preference number: 4 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTHACHS*ARSPRA
Trigger: AGCACGTGGTGAGCGTGCGCAAGAGTGGCAAGCATG...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCGTATCTGGCCGGCGGTaGAGTTTGAGGGTGACCTCA +
Preference number: 4 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTVSGRR*SLRVTS
Trigger: TGAGGTCACCCTCAAACTGCACCGCCGGCCAGATAC...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGTCATTTGGCGGAAGTTaGGGCGCGGATGGAACTTGC +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLSFGGS*GADGTC
Trigger: GCAAGTTCCATCCGCGCCCCAACTTCCGCCAAATGA...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGCACATGCACGGTATGTaGCCCCTCCATGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQHMHGM*PLHGRS
Trigger: AGACCTGCCATGGAGGGGCCACATACCGTGCATGTG...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCAGGCGCGGCAGGCGTTaGGGTTACAGGCTTCCGACA +
Preference number: 4 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLARRGRR*GYRLPT
Trigger: TGTCGGAAGCCTGTAACCCCAACGCCTGCCGCGCCT...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTCTCCCGCACCTTCACTaGCTCCTCTGTGCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSLPHLH*LLCALW
Trigger: CCAAAGGGCACAGAGGAGCCAGTGAAGGTGCGGGAG...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGCCACCTCGGTGCCAATaGCTTCCACCACAAAATCGG +
Preference number: 4 (lower is better)
Translates to: ATRETRPSPRGQEGIWPAPPRCQ*LPPQNR
Trigger: CCGATTTTGTGGTGGAAGCCATTGGCACCGAGGTGG...CGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCGGCCTTCACCTTATCTaGGAAGCAGTCAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTGLHLI*EAVRWG
Trigger: GCCCCACCTGACTGCTTCCCAGATAAGGTGAAGGCC...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTGTCAGCACCGTGAAGTaGGTGGGCTTCCCGACTTCC +
Preference number: 4 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSVSTVK*VGFPTS
Trigger: GGAAGTCGGGAAGCCCACCCACTTCACGGTGCTGAC...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCCCACAAAGGGGCTCTTaGGGACAGGGTCCCCGCCAT +
Preference number: 4 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLAPQRGS*GQGPRH
Trigger: ATGGCGGGGACCCTGTCCCCAAGAGCCCCTTTGTGG...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGGCACATGGACACGGGTaGGGAATTTGGGCACGGGAT +
Preference number: 4 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQAHGHG*GIWARD
Trigger: ATCCCGTGCCCAAATTCCCCACCCGTGTCCATGTGC...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCCTGCGTGGCACCTCCTaGTCAGCATACTTGACGGCT +
Preference number: 4 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTLRGTS*SAYLTA
Trigger: AGCCGTCAAGTATGCTGACCAGGAGGTGCCACGCAG...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGCTTGAAGGGGCTGCGTaGCACCTCCTGGTCAGCATA +
Preference number: 4 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRLEGAA*HLLVSI
Trigger: TATGCTGACCAGGAGGTGCCACGCAGCCCCTTCAAG...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTTGGCCCGCACCTTGCTaGCATCATGAGCTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSWPAPC*HHELGG
Trigger: TCCTCCCAGCTCATGATGCCAGCAAGGTGCGGGCCA...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTTGCTGGCATCCCCAGTaGGCAGAGCATGGATGCGGA +
Preference number: 4 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSCWHPQ*AEHGCG
Trigger: TCCGCATCCATGCTCTGCCCACTGGGGATGCCAGCA...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTTCACACGCCAGCACGTaGAAGGGGCTGTTGGGGATG +
Preference number: 4 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSSHAST*KGLLGM
Trigger: CATCCCCAACAGCCCCTTCCACGTGCTGGCGTGTGA...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000325888.13
CDS-3UTR CCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGGGGCTCCCAGGGATGTaGTTGCCGTCATACTTGATC +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLGLPGM*LPSYLI
Trigger: GATCAAGTATGACGGCAACCACATCCCTGGGAGCCC...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CTGGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTCAGTGACACGTCCGTaGAGGTGCCCACATTCAGCT +
Preference number: 4 (lower is better)
Translates to: LAWVECTSLRPVHVPGHSSVTRP*RCPHSA
Trigger: AGCTGAATGTGGGCACCTCCACGGACGTGTCACTGA...GGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCATGCTGGCGGTCAGCTaGCTCAGATCACTCTCGGTG +
Preference number: 4 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTMLAVS*LRSLSV
Trigger: CACCGAGAGTGATCTGAGCCAGCTGACCGCCAGCAT...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCTGCCGATGGTGGCGATaGAAGGTGCCTGTCTCCGCC +
Preference number: 4 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLACRWWR*KVPVSA
Trigger: GGCGGAGACAGGCACCTTCCATCGCCACCATCGGCA...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCTGGGGCCCCATTTCCTaGGGCACAAAGCGCACGCTG +
Preference number: 4 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLAWGPIS*GTKRTL
Trigger: CAGCGTGCGCTTTGTGCCCCAGGAAATGGGGCCCCA...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCCCAGGCCACTCCTGCTaGTTCGGGGGCTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTPGHSC*FGGCFL
Trigger: AAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGG...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGAGCCTGGCTTGGGTaGAGTGCACATCGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLAGAWLG*SAHRSG
Trigger: GCCTGAGCGATGTGCACTCCACCCAAGCCAGGCTCC...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGCACGAGCATCAATGGTaGACTCAGCGGGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQHEHQW*TQRACP
Trigger: TGGACAAGCCCGCTGAGTTCACCATTGATGCTCGTG...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTCGTTGGGGATCACCTTaGTGTCGATGGGACAGCCGT +
Preference number: 4 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSRWGSP*CRWDSR
Trigger: ACGGCTGTCCCATCGACATCAAGGTGATCCCCAACG...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCCTACCAGTCCACCCTTaGGACCCGGGCCATAAGCAC +
Preference number: 4 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLALPVHP*DPGHKH
Trigger: GTGCTTATGGCCCGGGTCTCAAGGGTGGACTGGTAG...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGTGTTGTCCTTACAGGTaGTCTCTGCCTTGGATGGGC +
Preference number: 4 (lower is better)
Translates to: ATRETRPSPRGQEGIWPACCPYR*SLPWMG
Trigger: GCCCATCCAAGGCAGAGATCACCTGTAAGGACAACA...CGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCCGGTCACCTTCACAGTaGAGGGGCTTCCAGGCACGT +
Preference number: 4 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLARSPSQ*RGFQAR
Trigger: ACGTGCCTGGAAGCCCCTTCACTGTGAAGGTGACCG...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCTTGGGGTTCAGCTaGTTGGATCGAACAGGGGCA +
Preference number: 4 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWFLGFS*LDRTGA
Trigger: TGCCCCTGTTCGATCCAAGCAGCTGAACCCCAAGAA...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGGTTTGTTGGCCACATTaGCCACAGGTTCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQVCWPH*PQVPGQ
Trigger: CTGGCCTGGAACCTGTGGGCAATGTGGCCAACAAAC...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGATGTGCAGCGGAACGTaGTGTCACCCTTGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQMCSGT*CHPCPP
Trigger: TGGAGGACAAGGGTGACAGCACGTTCCGCTGCACAT...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGATGTGCAGCGGAACGTaGTGTCACCCTTGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRMCSGT*CHPCPP
Trigger: TGGAGGACAAGGGTGACAGCACGTTCCGCTGCACAT...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCCTGCCTCACCGACCTTaGCGCGCTCCAGGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVLPHRP*RAPGPV
Trigger: GACCGGGCCTGGAGCGCGGCAAGGTCGGTGAGGCAG...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGACTCGCCCGCGTCCCGTaGGTCGATGGTGAACTCCAC +
Preference number: 4 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGLARVP*VDGELH
Trigger: GTGGAGTTCACCATCGACGCACGGGACGCGGGCGAG...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGGCCTTTCTCAGTGGGTaGATACCTCACCGTGATGGT +
Preference number: 4 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWAFLSG*IPHRDG
Trigger: ACCATCACGGTGAGGTATGCACCCACTGAGAAAGGC...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGCTTACAGGTGATCTCTaGCTTGGATGGGCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRLTGDL*LGWALH
Trigger: GTGGAGGGCCCATCCAAGGCAGAGATCACCTGTAAG...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCATCATGTTGGTGCCTaGTTTGCTGCAGTCCACGGT +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLHHVGA*FAAVHG
Trigger: ACCGTGGACTGCAGCAAAGCAGGCACCAACATGATG...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGTGCCAGGCCACTCCTaGTGGTTCGGGGGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLAVPGHS*WFGGCF
Trigger: AAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCAC...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCTCATTTGGCGGAAGTTaGGGCGCGGATGGAACTTGC +
Preference number: 4 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTSFGGS*GADGTC
Trigger: GCAAGTTCCATCCGCGCCCCAACTTCCGCCAAATGA...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCCAAGCAGCCGCTGCTTaGGCGTCTGTTTGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLAQAAAA*ASVCGH
Trigger: ATGCCCGCAAACAGACGCCCAAGCAGCGGCTGCTTG...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCCAGGCCCATAGGCGATaGCTTTCTTGGGGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTQAHRR*LSWGSA
Trigger: AGCTGAACCCCAAGAAAGCCATCGCCTATGGGCCTG...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGCGTTCAATGTTCTaGCCAGCAAAGAGCACGGTC +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLLRSMF*PAKSTV
Trigger: GACCGTGCTCTTTGCTGGCCAGAACATTGAACGCAG...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAACTCCCCAGGCTCCGTaGGCCAGTACCGCACATCGC +
Preference number: 4 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGTPQAP*ASTAHR
Trigger: GCGATGTGCGGTACTGGCCCACGGAGCCTGGGGAGT...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGCATTGTCCCGGATGTTaGCCTTCTTGGGCTTACCCT +
Preference number: 4 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWHCPGC*PSWAYP
Trigger: AGGGTAAGCCCAAGAAGGCCAACATCCGGGACAATG...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGCTGGCGCAGCTGTaGCACTTCAGAGGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGGLAQL*HFRGLL
Trigger: GAGGAGCCCTCTGAAGTGCCACAGCTGCGCCAGCCC...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325888.13
CDS-3UTR CCA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCGTCCCCGATCTCAGATaGCCCCACCAGGATCTTGAA +
Preference number: 4 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTVPDLR*PHQDLE
Trigger: TTCAAGATCCTGGTGGGGCCATCTGAGATCGGGGAC...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CTGGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCGATGTCCACCTTGCTTaGGCCTTCAATACTCAGCCC +
Preference number: 4 (lower is better)
Translates to: LAWVECTSLRPVHVPGHSDVHLA*AFNTQP
Trigger: GGGCTGAGTATTGAAGGCCCAAGCAAGGTGGACATC...GGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGTGGGCAGACACCATCTaGAACCAGTTTCCTGGGATC +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLWADTI*NQFPGI
Trigger: GATCCCAGGAAACTGGTTCCAGATGGTGTCTGCCCA...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGATGCTGAACTCGGCTaGCACGCCGGCCACACCTCG +
Preference number: 4 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGDAELG*HAGHTS
Trigger: CGAGGTGTGGCCGGCGTGCCAGCCGAGTTCAGCATC...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTTTGAGCCCCGTCTCCTaGAGGCTGGTGACAGTGAGA +
Preference number: 4 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSLSPVS*RLVTVR
Trigger: TCTCACTGTCACCAGCCTCCAGGAGACGGGGCTCAA...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
3UTR CAA 72 bp CTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTaGAGGGTGACCTCACACACAGACACCCACAACACA +
Preference number: 4 (lower is better)
Translates to: LGVRRVSGRRCS*RVTSHTDTHNT
Trigger: TGTGTTGTGGGTGTCTGTGTGTGAGGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCCACCACAAAATCGGCTaGCTTGCCCACCTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLAHHKIG*LAHLAS
Trigger: ACTGGCCAGGTGGGCAAGTCAGCCGATTTTGTGGTG...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGACCTTGGTCAGCACCGTaGAGTGGGTGGGCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGPWSAP*SGWASR
Trigger: TCGGGAAGCCCACCCACTTCACGGTGCTGACCAAGG...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGCAGCAAACAGGATGTTaGTGGTGTACTCGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRQQTGC*WCTRQA
Trigger: AGCCTGGCGAGTACACCATCAACATCCTGTTTGCTG...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTCATAGTCTCCAGGAGTaGAGGGGATGTACTCCACGG +
Preference number: 4 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSHSLQE*RGCTPR
Trigger: CCGTGGAGTACATCCCCTTCACTCCTGGAGACTATG...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACAGGATGCCAGAGGCGTTaGGGCCTGGGCCGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTGCQRR*GLGRWP
Trigger: GGGCCAGCGGCCCAGGCCTCAACGCCTCTGGCATCC...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTCTCCAATGGACACTGTaGCGAGGCACTTGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSLQWTL*RGTCWH
Trigger: ATGCCAGCAAGTGCCTCGTCACAGTGTCCATTGGAG...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCCATCGAAGCGCACGATaGTGCTGTAGTCTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLAHRSAR*CCSLQA
Trigger: CGCCTGGAGACTACAGCATCATCGTGCGCTTCGATG...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTCCATGTCCTCACAGTTaGTGTCCACCTTGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSPCPHS*CPPCLG
Trigger: GCCCAAGCAAGGTGGACATCAACTGTGAGGACATGG...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGAGAGCTTTGCCGTCCTaGCAGTCACGGTTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQRALPS*QSRLKL
Trigger: CAACTTCAACCGTGACTGGCAGGACGGCAAAGCTCT...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGTCACCTCAAAGGGACTaGGTTCAATGTTCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: ATRETRPSPRGQEGIWPASPQRD*VQCSGQ
Trigger: CTGGCCAGAACATTGAACGCAGTCCCTTTGAGGTGA...CGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTGCTTCAGGTCTCCCTTaGCAGCTGCACGAGCATCAA +
Preference number: 4 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSASGLP*QLHEHQ
Trigger: TTGATGCTCGTGCAGCTGGCAAGGGAGACCTGAAGC...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGATAAGTCACTGTCACTaGCATGTTGCCCTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWISHCH*HVALLD
Trigger: GTCCAGCAGGGCAACATGGCAGTGACAGTGACTTAT...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGACACTGGCCCGCACCTTaGTCGGGTCAAACACAGGCC +
Preference number: 4 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGHWPAP*SGQTQA
Trigger: GGCCTGTGTTTGACCCGAGCAAGGTGCGGGCCAGTG...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTACTGCACTCGGTAGGTaGCGTCCCCATTGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSTALGR*RPHCLS
Trigger: TGACAGACAATGGGGACGGCACCTACCGAGTGCAGT...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGGGCCAAGGCCCCCGGTaGCCGCTCCCCTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLEGQGPR*PLPWSP
Trigger: TGGAGACCAGGGGAGCGGGCACCGGGGGCCTTGGCC...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CTGGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCGGATGTACTCCACGGTaGAGCTACCATCCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: LAWVECTSLRPVHVPGHSGCTPR*SYHPCC
Trigger: ACAACAAGGATGGTAGCTGCACCGTGGAGTACATCC...GGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTAGGACACAGTGTACGTaGCATCCCCATTGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSRTQCT*HPHCPG
Trigger: TCCGGGACAATGGGGATGGCACGTACACTGTGTCCT...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGCCTTTCTCAGTGGGTaGATACCTCACCGTGATGGT +
Preference number: 4 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRAFLSG*IPHRDG
Trigger: ACCATCACGGTGAGGTATGCACCCACTGAGAAAGGC...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGGCAGATAGGACACGGTaGAGGTGCCATCCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQADRTR*RCHPCC
Trigger: ACAACAAGGATGGCACCTGCACCGTGTCCTATCTGC...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGGCTGTTGGTGACATaGTTGCCACTCTTGCGCACG +
Preference number: 4 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLAGLLVT*LPLLRT
Trigger: CGTGCGCAAGAGTGGCAAGCATGTCACCAACAGCCC...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGCAAGCCCCCATAACCTaGATTGCGAGTGTCCACGAT +
Preference number: 4 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQQAPIT*IASVHD
Trigger: ATCGTGGACACTCGCAATGCAGGTTATGGGGGCTTG...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGCAAGCCCCCATAACCTaGATTGCGAGTGTCCACGAT +
Preference number: 4 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRQAPIT*IASVHD
Trigger: ATCGTGGACACTCGCAATGCAGGTTATGGGGGCTTG...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGACTGGCTTGGGTGGAGTaGACATCGCTCAGGCCGGTC +
Preference number: 4 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGLAWVE*TSLRPV
Trigger: GACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGGTAACCCAGCGACCTTaGGCACATAGGAGACAGCAT +
Preference number: 4 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQVTQRP*AHRRQH
Trigger: ATGCTGTCTCCTATGTGCCCAAGGTCGCTGGGTTAC...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTAACCCAGCGACCTTaGGCACATAGGAGACAGCAT +
Preference number: 4 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRVTQRP*AHRRQH
Trigger: ATGCTGTCTCCTATGTGCCCAAGGTCGCTGGGTTAC...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCCCAGCTTGCAGGGGATaGGCCGGCGAGAGGGCGAAG +
Preference number: 4 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVPACRG*AGERAK
Trigger: CTTCGCCCTCTCGCCGGCCCATCCCCTGCAAGCTGG...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCACCGCAGGCTGCACATaGACACGGGTGGGGAATTTG +
Preference number: 4 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLATAGCT*TRVGNL
Trigger: CAAATTCCCCACCCGTGTCCATGTGCAGCCTGCGGT...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGACTGCCCCATCCGGCGTaGACACCGTGCATGTCACCT +
Preference number: 4 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGLPHPA*TPCMSP
Trigger: AGGTGACATGCACGGTGTCCACGCCGGATGGGGCAG...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTACTTGATCCCCATCTaGTGCAGGCCTTTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWYLIPI*CRPFSV
Trigger: CACTGAGAAAGGCCTGCACCAGATGGGGATCAAGTA...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAAGGGGGCACGGATGCTaGCGGTCAGCTGGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGRGHGC*RSAGSD
Trigger: ATCTGAGCCAGCTGACCGCCAGCATCCGTGCCCCCT...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGACGCTGCAGTCCACCGTaGAGTAGGTGGGCTCATTGG +
Preference number: 4 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGRCSPP*SRWAHW
Trigger: CCAATGAGCCCACCTACTTCACGGTGGACTGCAGCG...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCCGCCTGGGGCGCACTTaGTGCCGATGCTCACGTCGC +
Preference number: 4 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSRLGRT*CRCSRR
Trigger: GCGACGTGAGCATCGGCATCAAGTGCGCCCCAGGCG...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGGACAGCGGTGTACTTaGCAGTGTAGGAGTAGTCAT +
Preference number: 4 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRGQRCT*QCRSSH
Trigger: ATGACTACTCCTACACTGTCAAGTACACCGCTGTCC...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTCAGCAAACAGGATGTTaGTGGTGTACTCGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSQQTGC*WCTRQA
Trigger: AGCCTGGCGAGTACACCATCAACATCCTGTTTGCTG...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTATCTTGCATCCACAGTaGACTCAGTGGTCACCTCCC +
Preference number: 4 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSILHPQ*TQWSPP
Trigger: GGGAGGTGACCACTGAGTTCACTGTGGATGCAAGAT...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGACGACCTCCTTGGGGGTaGAGGAGATCCCAATGTGCC +
Preference number: 4 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGRPPWG*RRSQCA
Trigger: GGCACATTGGGATCTCCTTCACCCCCAAGGAGGTCG...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGACTCGCTGCGCTGCGCTaGTCTCCTCTCCAACTTCTC +
Preference number: 4 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGLAALR*SPLQLL
Trigger: GAGAAGTTGGAGAGGAGAGCAGCGCAGCGCAGCGAG...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTGCTTGGGCGTCTGTTTaGGGGCATCCTCATCATCTT +
Preference number: 4 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSAWASV*GHPHHL
Trigger: AAGATGATGAGGATGCCCGCAAACAGACGCCCAAGC...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGTGAAGTGGGCAGGCTaGAGCACGGTGTTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGVKWAG*STVLPC
Trigger: ACAGGGCAACACCGTGCTGCAGCCTGCCCACTTCAC...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGTTTGTTGGCCACATTaGCCACAGGTTCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLAVCWPH*PQVPGQ
Trigger: CTGGCCTGGAACCTGTGGGCAATGTGGCCAACAAAC...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGACCTTTTGCACTCCTaGCTCTGGGCTCACCTGTAC +
Preference number: 4 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLADLLHS*LWAHLY
Trigger: GTACAGGTGAGCCCAGAGGCAGGAGTGCAAAAGGTC...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCCCCGCTCGGGGTGGCTaGCCTCGCCCACGTTCACCC +
Preference number: 4 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCPARGG*PRPRSP
Trigger: GGGTGAACGTGGGCGAGGGCAGCCACCCCGAGCGGG...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGAGGTCCAGCGGGGGTaGCACATTCACCACAAAGGG +
Preference number: 4 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGEVQRG*HIHHKG
Trigger: CCCTTTGTGGTGAATGTGGCACCCCCGCTGGACCTC...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCCTCGCCCGCGTCCCGTaGGTCGATGGTGAACTCCAC +
Preference number: 4 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVLARVP*VDGELH
Trigger: GTGGAGTTCACCATCGACGCACGGGACGCGGGCGAG...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTGCAGATAGGACACGGTaGAGGTGCCATCCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSADRTR*RCHPCC
Trigger: ACAACAAGGATGGCACCTGCACCGTGTCCTATCTGC...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTGTCCACGATGAACTCTaGCACCTGGAATGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSVHDEL*HLECVS
Trigger: GGACACACATTCCAGGTGGCAGAGTTCATCGTGGAC...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCGCCCCCGAGGGTGTGTaGACCCGGGCATCAATCACG +
Preference number: 4 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVAPEGV*TRASIT
Trigger: CGTGATTGATGCCCGGGTGCACACACCCTCGGGGGC...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTACATGGGCATGGAGATaGAGTAGTGCAGGATCAGCG +
Preference number: 4 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSTWAWR*SSAGSA
Trigger: CGCTGATCCTGCACTACTCCATCTCCATGCCCATGT...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGACAAGCAGCCGCTGCTTaGGCGTCTGTTTGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGQAAAA*ASVCGH
Trigger: ATGCCCGCAAACAGACGCCCAAGCAGCGGCTGCTTG...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCGCGTTCTCCACGGGCTaGTTGGGGTCCCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSAFSTG*LGSQAS
Trigger: GGAGGCCTGGGACCCCAACCAGCCCGTGGAGAACGC...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCCAGGCCCATAGGCGATaGCTTTCTTGGGGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLAQAHRR*LSWGSA
Trigger: AGCTGAACCCCAAGAAAGCCATCGCCTATGGGCCTG...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCAGTAGGTGGGTTTGTTaGCCACATTGCCCACAGGTT +
Preference number: 4 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTSRWVC*PHCPQV
Trigger: AACCTGTGGGCAATGTGGCCAACAAACCCACCTACT...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCGTCCCGCCGGCCCTGTaGGTCCACGATCACCACAGC +
Preference number: 4 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSVPPAL*VHDHHS
Trigger: GCTGTGGTGATCGTGGACCCACAGGGCCGGCGGGAC...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCTGGGAAGCAGTCAGGTaGGGCGGGCAGGATGTGGGC +
Preference number: 4 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVWEAVR*GGQDVG
Trigger: GCCCACATCCTGCCCGCCCCACCTGACTGCTTCCCA...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCCCCGGAAGGGGCTCTTaGGCACGTTTACGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVPGRGS*ARLRLP
Trigger: GGGGAGGCGTAAACGTGCCCAAGAGCCCCTTCCGGG...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGATGTAGGGCCCGTCAGTaGCTGGGGTGTAGTGGACAG +
Preference number: 4 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGCRARQ*LGCSGQ
Trigger: CTGTCCACTACACCCCAGCCACTGACGGGCCCTACA...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCAGAGGCGTTGAGGCCTaGGCCGCTGGCCCGCACCTT +
Preference number: 4 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSRGVEA*AAGPHL
Trigger: AAGGTGCGGGCCAGCGGCCCAGGCCTCAACGCCTCT...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCATGAACTCTGCCACCTaGAATGTGTGTCCCTCGGAA +
Preference number: 4 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTMNSAT*NVCPSE
Trigger: TTCCGAGGGACACACATTCCAGGTGGCAGAGTTCAT...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACACCCCGCCGACCTGGGTaGACTCCTCCACCCGCACCT +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTPRRPG*TPPPAP
Trigger: AGGTGCGGGTGGAGGAGTCCACCCAGGTCGGCGGGG...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGATCATGTCCTGAGAGCTaGCCTCACCCTCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGSCPES*PHPPAA
Trigger: GGCAGCAGGAGGGTGAGGCCAGCTCTCAGGACATGA...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCGACCTCATAGTCACCTaGTTCCTGGACGACATAGGA +
Preference number: 4 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTDLIVT*FLDDIG
Trigger: TCCTATGTCGTCCAGGAACCAGGTGACTATGAGGTC...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGCCACCATCATCATGTTaGTGCCTGCTTTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQPPSSC*CLLCCS
Trigger: ACTGCAGCAAAGCAGGCACCAACATGATGATGGTGG...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCAACTCAGGGCTTCCCTaGCCTCGCAGCCCTCGCCAG +
Preference number: 4 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVNSGLP*PRSPRQ
Trigger: CTGGCGAGGGCTGCGAGGCCAGGGAAGCCCTGAGTT...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCCCACCGTCTGCACGGTaGAGTGGGCAGGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSPPSAR*SGQAAA
Trigger: TGCTGCAGCCTGCCCACTTCACCGTGCAGACGGTGG...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCGCCAGGGCCACGGGCTaGCACCTTGTTGGCATCTCC +
Preference number: 4 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSARATG*HLVGIS
Trigger: GGAGATGCCAACAAGGTGTCAGCCCGTGGCCCTGGC...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGACACCACAAAATCGGCTaGCTTGCCCACCTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGHHKIG*LAHLAS
Trigger: ACTGGCCAGGTGGGCAAGTCAGCCGATTTTGTGGTG...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCTGGCAAACAGCACCATaGTGGTGTAGCGGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVWQTAP*WCSGPP
Trigger: GGGCGGGCCGCTACACCATCATGGTGCTGTTTGCCA...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGAGTCATGGTTGTCTATaGTCTCAAAGTCCCGCACAA +
Preference number: 4 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWSHGCL*SQSPAQ
Trigger: TTGTGCGGGACTTTGAGATCATAGACAACCATGACT...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGTGGCCCCCGAGGGGTTaGGCACACGAGCCGTCACGT +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLEWPPRG*AHEPSR
Trigger: ACGTGACGGCTCGTGTGCTCAACCCCTCGGGGGCCA...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCCCCGTGCGTCGATGGTaGACTCCACAGGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSPVRRW*TPQAGW
Trigger: CCAGCCTGCCTGTGGAGTTCACCATCGACGCACGGG...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCCCTCCTGCTGCCGGGTaGTGCTGCCGAAGGATCCCA +
Preference number: 4 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSPPAAG*CCRRIP
Trigger: TGGGATCCTTCGGCAGCATCACCCGGCAGCAGGAGG...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCCCCGGGTCCAGATGCTaGACTCGGCTGGCACGCCGG +
Preference number: 4 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCPGSRC*TRLARR
Trigger: CCGGCGTGCCAGCCGAGTTCAGCATCTGGACCCGGG...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCCCGCGTCCACCGTCTaGACGGTGAAGTGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWPASTV*TVKWAG
Trigger: GCCTGCCCACTTCACCGTGCAGACGGTGGACGCGGG...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGAGGAGACAGCATAGGTaGGATCCTTGTCATTGTTGG +
Preference number: 4 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRRRQHR*DPCHCW
Trigger: CCAACAATGACAAGGATCGCACCTATGCTGTCTCCT...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGACATCTCCCAGGGCCATaGCCACGTTCACCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGHLPGP*PRSPQR
Trigger: CCTTTGAGGTGAACGTGGGCATGGCCCTGGGAGATG...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCCAGCAACATCGCCAGTaGCGGCCCCCGCAGTGTAGA +
Preference number: 4 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVQQHRQ*RPPQCR
Trigger: TCTACACTGCGGGGGCCGGCACTGGCGATGTTGCTG...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCCCACAGCAAACGGGCTaGCAGGCACCGGGTGACCAT +
Preference number: 4 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVPQQTG*QAPGDH
Trigger: ATGGTCACCCGGTGCCTGGCAGCCCGTTTGCTGTGG...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCCACAGTGAAGGTGGCTaGCTCACCGACCTTGCCGCG +
Preference number: 4 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVHSEGG*LTDLAA
Trigger: CGCGGCAAGGTCGGTGAGGCAGCCACCTTCACTGTG...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCGAGCCGTCACGTGGTTaGCGCCTGTGGCTGTTAGGG +
Preference number: 4 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVEPSRG*RLWLLG
Trigger: CCCTAACAGCCACAGGCGGCAACCACGTGACGGCTC...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCGGGCTCCCCGGGATGTaGTTGTCATCGAAGCGCACG +
Preference number: 4 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVGLPGM*LSSKRT
Trigger: CGTGCGCTTCGATGACAAGCACATCCCGGGGAGCCC...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCGGCAGGGCTCCTCGTTaGCCGAGGGGGCACGGATGC +
Preference number: 4 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCGRAPR*PRGHGC
Trigger: GCATCCGTGCCCCCTCGGGCAACGAGGAGCCCTGCC...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAAAGGAGATCCCAATGTaGCGGTTGGGCAGGCGCTTC +
Preference number: 4 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGKEIPM*RLGRRF
Trigger: GAAGCGCCTGCCCAACCGGCACATTGGGATCTCCTT...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCCGGGCACCGTTCAGCTaGACGGCAAAGGACGCTGGC +
Preference number: 4 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSRAPFS*TAKDAG
Trigger: GCCAGCGTCCTTTGCCGTGCAGCTGAACGGTGCCCG...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCTCCCCAGCCTGGCTCTaGTCCCCAACGCGGATCTTG +
Preference number: 4 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVSPAWL*SPTRIL
Trigger: CAAGATCCGCGTTGGGGAGCAGAGCCAGGCTGGGGA...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGATGGGGTTCAGCTGCTTaGATCGAACAGGGGCACCAG +
Preference number: 4 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGWGSAA*IEQGHQ
Trigger: CTGGTGCCCCTGTTCGATCCAAGCAGCTGAACCCCA...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTTTACCCGCTCGGGGTaGCTGCCCTCGCCCACGTTC +
Preference number: 4 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSFTRSG*LPSPTF
Trigger: GAACGTGGGCGAGGGCAGCCACCCCGAGCGGGTAAA...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCCACGGGTGGGGAATTTaGGCACGGGATGCCCGCCAT +
Preference number: 4 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVHGWGI*ARDARH
Trigger: ATGGCGGGCATCCCGTGCCCAAATTCCCCACCCGTG...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGATCGGGGTCCAAGATCTaGACAGTGAGCAACCCCTCG +
Preference number: 4 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGSGSKI*TVSNPS
Trigger: CGAGGGGTTGCTCACTGTCCAGATCTTGGACCCCGA...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGTCAAAGGTACCGTCATaGTTCTCAACCACATCCACA +
Preference number: 4 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLSKVPS*FSTTST
Trigger: TGTGGATGTGGTTGAGAACCATGACGGTACCTTTGA...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGACAGCATGGACTCCATTaGCTCCACAGGCACCACTGG +
Preference number: 4 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGQHGLH*LHRHHW
Trigger: CCAGTGGTGCCTGTGGAGCCAATGGAGTCCATGCTG...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTGACCTCATAGTCACCTaGTTCCTGGACGACATAGGA +
Preference number: 4 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSDLIVT*FLDDIG
Trigger: TCCTATGTCGTCCAGGAACCAGGTGACTATGAGGTC...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCCCTGGGAGCCTGGCTTaGGTGGAGTGCACATCGCTC +
Preference number: 4 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVPGSLA*VECTSL
Trigger: GAGCGATGTGCACTCCACCCAAGCCAGGCTCCCAGG...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGCAGCCGCACTTTATTTaGAGTTTTCCACCTAAGCAG +
Preference number: 4 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWQPHFI*SFPPKQ
Trigger: CTGCTTAGGTGGAAAACTCCAAATAAAGTGCGGCTG...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCCTCCACAGGCACCACTaGCTCCTCTGTGGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVLHRHH*LLCGQH
Trigger: GTGCTGGCCACAGAGGAGCCAGTGGTGCCTGTGGAG...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000346177.6
CDS-3UTR TCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACAGCCAGGGCCACGGGCTaGCACCTTGTTGGCATCTCC +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTARATG*HLVGIS
Trigger: GGAGATGCCAACAAGGTGTCAGCCCGTGGCCCTGGC...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGACAGCGGTGTACTTaGCAGTGTAGGAGTAGTCAT +
Preference number: 4 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLAGQRCT*QCRSSH
Trigger: ATGACTACTCCTACACTGTCAAGTACACCGCTGTCC...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGACATCCAGTTGGCCCTaGCCGCCAGCCCCTCGTGTG +
Preference number: 4 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWTSSWP*PPAPRV
Trigger: CACACGAGGGGCTGGCGGTCAGGGCCAACTGGATGT...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGACATCCAGTTGGCCCTaGCCGCCAGCCCCTCGTGTG +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLETSSWP*PPAPRV
Trigger: CACACGAGGGGCTGGCGGTCAGGGCCAACTGGATGT...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCGCCGAATGGTGGCTTTaGAGGGCGAGCCAGGGATGT +
Preference number: 4 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVAEWWL*RASQGC
Trigger: ACATCCCTGGCTCGCCCTTCAAAGCCACCATTCGGC...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGTCAGCACCTCGGCCTTaGCCCCGGCATCCGACAGGA +
Preference number: 4 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWSAPRP*PRHPTG
Trigger: TCCTGTCGGATGCCGGGGTCAAGGCCGAGGTGCTGA...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGTCAGCACCTCGGCCTTaGCCCCGGCATCCGACAGGA +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLESAPRP*PRHPTG
Trigger: TCCTGTCGGATGCCGGGGTCAAGGCCGAGGTGCTGA...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCCTCAACACCAGGCCCTaGGACCTTGACGCCACTGGT +
Preference number: 4 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVLNTRP*DLDATG
Trigger: ACCAGTGGCGTCAAGGTCTCAGGGCCTGGTGTTGAG...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCCCGTGCGTCGATGGTaGACTCCACAGGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWPVRRW*TPQAGW
Trigger: CCAGCCTGCCTGTGGAGTTCACCATCGACGCACGGG...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCCCAAGATCTGGACAGTaGGCAACCCCTCGCCCGCGT +
Preference number: 4 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSPRSGQ*ATPRPR
Trigger: ACGCGGGCGAGGGGTTGCTCACTGTCCAGATCTTGG...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCGCCCTCCACGGCCAGTaGCAGACCCCCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCALHGQ*QTPFSS
Trigger: GCTGGAGAAGGGGGTCTGTCACTGGCCGTGGAGGGC...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACACCTCCTGCTGCCGGGTaGTGCTGCCGAAGGATCCCA +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTPPAAG*CCRRIP
Trigger: TGGGATCCTTCGGCAGCATCACCCGGCAGCAGGAGG...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGGCTGGCCACGGTACTTaGCAGCGACCGTATGGGGCC +
Preference number: 4 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWAGHGT*QRPYGA
Trigger: GGCCCCATACGGTCGCTGTCAAGTACCGTGGCCAGC...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACAGGGCGCCCAGAGCTTTaGCGTCCTGCCAGTCACGGT +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTGRPEL*RPASHG
Trigger: ACCGTGACTGGCAGGACGGCAAAGCTCTGGGCGCCC...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGATGTACTCCACGGTaGAGCTACCATCCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLAGCTPR*SYHPCC
Trigger: ACAACAAGGATGGTAGCTGCACCGTGGAGTACATCC...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCGGTGGCGATGGAAGGTaGCTGTCTCCGCCGGGTGAT +
Preference number: 4 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSGGDGR*LSPPGD
Trigger: ATCACCCGGCGGAGACAGGCACCTTCCATCGCCACC...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGGCCTCACCCTCCTGCTaGCGGGTGATGCTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLEASPSC*RVMLPK
Trigger: CTTCGGCAGCATCACCCGGCAGCAGGAGGGTGAGGC...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGGCCCCCGAGGGTGTGTaGACCCGGGCATCAATCACG +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLEAPEGV*TRASIT
Trigger: CGTGATTGATGCCCGGGTGCACACACCCTCGGGGGC...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTGAGCTGCATGACATGTaGAAAAGTCCCCTAGAAAGC +
Preference number: 4 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSELHDM*KSPLES
Trigger: GCTTTCTAGGGGACTTTTGCACATGTCATGCAGCTC...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATCTCCACGGGCTGGTTaGGGTCCCAGGCCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTSPRAG*GPRPPS
Trigger: ACTGGGAGGCCTGGGACCCCAACCAGCCCGTGGAGA...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGGCGGCCCGCCCCTGGTaGCGTGTACTTGACGGTGAA +
Preference number: 4 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWAARPW*RVLDGE
Trigger: TTCACCGTCAAGTACACGCCACCAGGGGCGGGCCGC...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCGGGTCCACCTTGATGTaGAAGGGGCTGGCGGGGATC +
Preference number: 4 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSGSTLM*KGLAGI
Trigger: GATCCCCGCCAGCCCCTTCCACATCAAGGTGGACCC...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACAAGGCTCGGACGCGGGTaGGATCACAGCCCTCGGTCA +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTRLGRG*DHSPRS
Trigger: TGACCGAGGGCTGTGATCCCACCCGCGTCCGAGCCT...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGGATGCTGAACTCGGCTaGCACGCCGGCCACACCTCG +
Preference number: 4 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWDAELG*HAGHTS
Trigger: CGAGGTGTGGCCGGCGTGCCAGCCGAGTTCAGCATC...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCCACGGCAAAGGACGCTaGCTGGTTCACCTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVHGKGR*LVHLEP
Trigger: GGGCTCAAGGTGAACCAGCCAGCGTCCTTTGCCGTG...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACAGGCCCCCTGGGAGCCTaGCTTGGGTGGAGTGCACAT +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTGPLGA*LGWSAH
Trigger: ATGTGCACTCCACCCAAGCCAGGCTCCCAGGGGGCC...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGGGCCCCCTGGGAGCCTaGCTTGGGTGGAGTGCACAT +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLEGPLGA*LGWSAH
Trigger: ATGTGCACTCCACCCAAGCCAGGCTCCCAGGGGGCC...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCAGAAATCAGGCCCCCTaGGAGCCTGGCTTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVRNQAP*EPGLGG
Trigger: TCCACCCAAGCCAGGCTCCCAGGGGGCCTGATTTCT...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTAGTCATGGTTGTCTATaGTCTCAAAGTCCCGCACAA +
Preference number: 4 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSSHGCL*SQSPAQ
Trigger: TTGTGCGGGACTTTGAGATCATAGACAACCATGACT...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCGCCGAATGGTGGCTTTaGAGGGCGAGCCAGGGATGT +
Preference number: 4 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSAEWWL*RASQGC
Trigger: ACATCCCTGGCTCGCCCTTCAAAGCCACCATTCGGC...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGGGCGCCCGGCCAGCTTaGCTGCAATCCACTGTGAAG +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLEGARPA*LQSTVK
Trigger: CTTCACAGTGGATTGCAGTCAAGCTGGCCGGGCGCC...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGGCTGCTGCGTGTaGAGGTGCGTGTCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTCGCCV*RCVSGA
Trigger: AGCGCCTGACACGCACCTTCACACGCAGCAGCCACA...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCCATCTCCCAGGGCCATaGCCACGTTCACCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVHLPGP*PRSPQR
Trigger: CCTTTGAGGTGAACGTGGGCATGGCCCTGGGAGATG...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACACAGGCCCGGACCTTTTaGACTCCTGCCTCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTQARTF*TPASGL
Trigger: GAGCCCAGAGGCAGGAGTGCAAAAGGTCCGGGCCTG...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGAGGAGCAGCGGAAGGTaGCGTCGCCGTTGGGGATCA +
Preference number: 4 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWRSSGR*RRRWGS
Trigger: TGATCCCCAACGGCGACGGCACCTTCCGCTGCTCCT...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGAGGAGCAGCGGAAGGTaGCGTCGCCGTTGGGGATCA +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLERSSGR*RRRWGS
Trigger: TGATCCCCAACGGCGACGGCACCTTCCGCTGCTCCT...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGCCACAGCAAACGGGCTaGCAGGCACCGGGTGACCAT +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLEPQQTG*QAPGDH
Trigger: ATGGTCACCCGGTGCCTGGCAGCCCGTTTGCTGTGG...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCACTGGCCCGCACCTTaGTCGGGTCAAACACAGGCC +
Preference number: 4 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWHWPAP*SGQTQA
Trigger: GGCCTGTGTTTGACCCGAGCAAGGTGCGGGCCAGTG...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACACACAGTGAAGGTGGCTaGCTCACCGACCTTGCCGCG +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTHSEGG*LTDLAA
Trigger: CGCGGCAAGGTCGGTGAGGCAGCCACCTTCACTGTG...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCGCTGGCCCGCACCTTaGTGGCATCATGAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWRWPAP*WHHELG
Trigger: TCCCAGCTCATGATGCCAGCAAGGTGCGGGCCAGCG...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGCCGGCGTGGACACCGTaGATGTCACCTTCCCCTCAC +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLEPAWTP*MSPSPH
Trigger: GTGAGGGGAAGGTGACATGCACGGTGTCCACGCCGG...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGGGGCTGTTGGGGATGTaGTCACCCCCGAAGCGGATG +
Preference number: 4 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWGLLGM*SPPKRM
Trigger: CATCCGCTTCGGGGGTGAGCACATCCCCAACAGCCC...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGTCCACGATGAACTCTaGCACCTGGAATGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGVHDEL*HLECVS
Trigger: GGACACACATTCCAGGTGGCAGAGTTCATCGTGGAC...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGGGTGGCGATGGAAGGTaGCTGTCTCCGCCGGGTGAT +
Preference number: 4 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWGGDGR*LSPPGD
Trigger: ATCACCCGGCGGAGACAGGCACCTTCCATCGCCACC...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGCTTGGGTGGAGTaGACATCGCTCAGGCCGGTC +
Preference number: 4 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWLAWVE*TSLRPV
Trigger: GACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTGGGGCACCTTGTTCTaGATCCAGCCAAGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSWGTLF*IQPSSR
Trigger: GCGGCTGCTTGGCTGGATCCAGAACAAGGTGCCCCA...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGTCAGGGGCAATGACCTaGGGCACCCCAAGCCAGTCG +
Preference number: 4 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWSGAMT*GTPSQS
Trigger: CGACTGGCTTGGGGTGCCCCAGGTCATTGCCCCTGA...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGGTGAGGGCCCCTCGATaGAGAAGCCCAGTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWVRAPR*RSPVSP
Trigger: TGGGGACACTGGGCTTCTCCATCGAGGGGCCCTCAC...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCGCGGCCCGCCCCTGGTaGCGTGTACTTGACGGTGAA +
Preference number: 4 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCAARPW*RVLDGE
Trigger: TTCACCGTCAAGTACACGCCACCAGGGGCGGGCCGC...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGTTCCGCTCCACCGCCTaGCTCCAGCTTGCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLEFRSTA*LQLAGD
Trigger: ATCCCCTGCAAGCTGGAGCCAGGCGGTGGAGCGGAA...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCCCGACAGGATCTCAATaGTCAGCTCCGCCTCGCCTG +
Preference number: 4 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSPTGSQ*SAPPRL
Trigger: CAGGCGAGGCGGAGCTGACCATTGAGATCCTGTCGG...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACAGGGCCCGTCAGTGGCTaGGGTGTAGTGGACAGTGTG +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTGPVSG*GVVDSV
Trigger: CACACTGTCCACTACACCCCAGCCACTGACGGGCCC...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCTCGGGGTCCAAGATCTaGACAGTGAGCAACCCCTCG +
Preference number: 4 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVSGSKI*TVSNPS
Trigger: CGAGGGGTTGCTCACTGTCCAGATCTTGGACCCCGA...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCGGATGTTGGCCTTCTTaGGCTTACCCTCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVGCWPS*AYPRGP
Trigger: TGGACCCCGAGGGTAAGCCCAAGAAGGCCAACATCC...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGACATTGTCCCGGATGTTaGCCTTCTTGGGCTTACCCT +
Preference number: 4 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGHCPGC*PSWAYP
Trigger: AGGGTAAGCCCAAGAAGGCCAACATCCGGGACAATG...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCCAGGCACCCAGGCCATaGCCTCCAATGGACACTGTG +
Preference number: 4 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSQAPRP*PPMDTV
Trigger: CACAGTGTCCATTGGAGGCCATGGCCTGGGTGCCTG...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACACTGCCCCATCCGGCGTaGACACCGTGCATGTCACCT +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTLPHPA*TPCMSP
Trigger: AGGTGACATGCACGGTGTCCACGCCGGATGGGGCAG...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCAGGTGCTGCCGATGGTaGCGATGGAAGGTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSRCCRW*RWKVPV
Trigger: GACAGGCACCTTCCATCGCCACCATCGGCAGCACCT...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGATGGGCAGACACCATCTaGAACCAGTTTCCTGGGATC +
Preference number: 4 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGWADTI*NQFPGI
Trigger: GATCCCAGGAAACTGGTTCCAGATGGTGTCTGCCCA...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCCGTGTCAGGCGCTCCTaGGCAGACACCATCTGGAAC +
Preference number: 4 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSRVRRS*ADTIWN
Trigger: GTTCCAGATGGTGTCTGCCCAGGAGCGCCTGACACG...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCTTGAGCCCCGTCTCCTaGAGGCTGGTGACAGTGAGA +
Preference number: 4 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVLSPVS*RLVTVR
Trigger: TCTCACTGTCACCAGCCTCCAGGAGACGGGGCTCAA...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCGCCGAGGCCGGCGTCTaGGTAGCCGCTGTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCAEAGV*VAAVVH
Trigger: ATGAACAACAGCGGCTACTCAGACGCCGGCCTCGGC...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCGTAGCCGCCCCACGTaGTGGTCACCACATACTTCC +
Preference number: 4 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWRSRPT*WSPHTS
Trigger: GGAAGTATGTGGTGACCATCACGTGGGGCGGCTACG...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCGCAGGATGTGGGCAATaGAGGGTGAGTCTCGGATGT +
Preference number: 4 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVAGCGQ*RVSLGC
Trigger: ACATCCGAGACTCACCCTTCATTGCCCACATCCTGC...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCCGTTGGGGATCACCTTaGTGTCGATGGGACAGCCGT +
Preference number: 4 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSRWGSP*CRWDSR
Trigger: ACGGCTGTCCCATCGACATCAAGGTGATCCCCAACG...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCGCTGCAGTCCACCGTaGAGTAGGTGGGCTCATTGG +
Preference number: 4 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWRCSPP*SRWAHW
Trigger: CCAATGAGCCCACCTACTTCACGGTGGACTGCAGCG...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCCCTTGGTCAGCACCGTaGAGTGGGTGGGCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCPWSAP*SGWASR
Trigger: TCGGGAAGCCCACCCACTTCACGGTGCTGACCAAGG...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACAAGGCAGGGCTGTAGGTaGTGTGGTAGGTGCCATCCG +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTRQGCR*CGRCHP
Trigger: CGGATGGCACCTACCACATCACCTACAGCCCTGCCT...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACAATCGGTTGGCCTTGTTaGCCAAGCCACCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTIGWPC*PSHPPG
Trigger: GCCTGGAGGGTGGCTTGGTCAACAAGGCCAACCGAT...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGTCCACTGTGAAGGTCTaGGGAACCCGGGCCCTGACA +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLESTVKV*GTRALT
Trigger: TGTCAGGGCCCGGGTTCCTCAGACCTTCACAGTGGA...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCGGCGCCCGGCCAGCTTaGCTGCAATCCACTGTGAAG +
Preference number: 4 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCGARPA*LQSTVK
Trigger: CTTCACAGTGGATTGCAGTCAAGCTGGCCGGGCGCC...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCCTGGTCAGCATACTTaGCGGCTACCGTGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWPGQHT*RLPCRA
Trigger: GGCCCTACACGGTAGCCGTCAAGTATGCTGACCAGG...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCCTTGGCATCCACCGTaGTCACCGTCTCCTGCCCAA +
Preference number: 4 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWPWHPP*SPSPAQ
Trigger: TTGGGCAGGAGACGGTGATCACGGTGGATGCCAAGG...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCGGTTGCCGTCATACTTaGTCCCCATCTGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSGCRHT*SPSGAG
Trigger: GCCTGCACCAGATGGGGATCAAGTATGACGGCAACC...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCGACCTCCTTGGGGGTaGAGGAGATCCCAATGTGCC +
Preference number: 4 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWRPPWG*RRSQCA
Trigger: GGCACATTGGGATCTCCTTCACCCCCAAGGAGGTCG...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACACGGTCACCTTCACAGTaGAGGGGCTTCCAGGCACGT +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTRSPSQ*RGFQAR
Trigger: ACGTGCCTGGAAGCCCCTTCACTGTGAAGGTGACCG...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCTGTGGCTGCTGCGTGTaGAGGTGCGTGTCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCCGCCV*RCVSGA
Trigger: AGCGCCTGACACGCACCTTCACACGCAGCAGCCACA...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCCAGGCCCGGACCTTTTaGACTCCTGCCTCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCQARTF*TPASGL
Trigger: GAGCCCAGAGGCAGGAGTGCAAAAGGTCCGGGCCTG...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGTCACAGATGACGTaGACAGCGTACTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSSSQMT*TAYSPG
Trigger: GCCTGGGGAGTACGCTGTGCACGTCATCTGTGACGA...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCGTCAATGTCAGCCTCTaGAGGGCCCACCACGCCTGG +
Preference number: 4 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCVNVSL*RAHHAW
Trigger: CCAGGCGTGGTGGGCCCTGCAGAGGCTGACATTGAC...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACACATCCAGCTTGGCCTTaGCGGCTCCCTTGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTHPAWP*RLPWSA
Trigger: TGCTGACCAAGGGAGCCGGCAAGGCCAAGCTGGATG...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCGCCCTTGGCTGTCCCTaGAAACTGCACATCCAGCTT +
Preference number: 4 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVALGCP*KLHIQL
Trigger: AAGCTGGATGTGCAGTTTGCAGGGACAGCCAAGGGC...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGGAGGTCCAGCGGGGGTaGCACATTCACCACAAAGGG +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLEEVQRG*HIHHKG
Trigger: CCCTTTGTGGTGAATGTGGCACCCCCGCTGGACCTC...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCGTATCGACCGCAGGCTaGACATGGACACGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCVSTAG*TWTRVG
Trigger: CCCCACCCGTGTCCATGTGCAGCCTGCGGTCGATAC...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGTGGGCAGAGCATGGATaGGGAAGGGCGAGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWWAEHG*GRASRG
Trigger: TCCCCTACTCGCCCTTCCGCATCCATGCTCTGCCCA...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCAAGGAGATCCCAATGTaGCGGTTGGGCAGGCGCTTC +
Preference number: 4 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSKEIPM*RLGRRF
Trigger: GAAGCGCCTGCCCAACCGGCACATTGGGATCTCCTT...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCTTTGCGATCCTCAAATaGAATCTCCGCTTTGCTAGG +
Preference number: 4 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLAFAILK*NLRFAR
Trigger: CCTAGCAAAGCGGAGATTGCATTTGAGGATCGCAAA...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCTCCCCAGCCTGGCTCTaGTCCCCAACGCGGATCTTG +
Preference number: 4 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCSPAWL*SPTRIL
Trigger: CAAGATCCGCGTTGGGGAGCAGAGCCAGGCTGGGGA...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGACCATCATCATGTTGGTaGCTGCTTTGCTGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGPSSCW*LLCCSP
Trigger: TGGACTGCAGCAAAGCAGGCACCAACATGATGATGG...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGGTGCCAGGCCACTCCTaGTGGTTCGGGGGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWVPGHS*WFGGCF
Trigger: AAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCAC...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGCACGGTGTTGCCCTGTaGCTCGATGCCAGGCCCATA +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLEHGVAL*LDARPI
Trigger: TATGGGCCTGGCATCGAGCCACAGGGCAACACCGTG...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACACAGGCTTCCGACACATaGACAGGGAAGGGACTGCGG +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTQASDT*TGKGLR
Trigger: CCGCAGTCCCTTCCCTGTCCATGTGTCGGAAGCCTG...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCGTGAGGGCCCCTCGATaGAGAAGCCCAGTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCVRAPR*RSPVSP
Trigger: TGGGGACACTGGGCTTCTCCATCGAGGGGCCCTCAC...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACAGGGGCGGGCAGGATGTaGGCAATGAAGGGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTGAGRM*AMKGES
Trigger: AGACTCACCCTTCATTGCCCACATCCTGCCCGCCCC...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGGGGGCGGGCAGGATGTaGGCAATGAAGGGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWGAGRM*AMKGES
Trigger: AGACTCACCCTTCATTGCCCACATCCTGCCCGCCCC...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGACTGCACATCCAGCTTaGCCTTGCCGGCTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWTAHPA*PCRLPW
Trigger: CCAAGGGAGCCGGCAAGGCCAAGCTGGATGTGCAGT...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCGCCATGTTGCCCTGCTaGACAGCGGTGTACTTGACA +
Preference number: 4 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVAMLPC*TAVYLT
Trigger: TGTCAAGTACACCGCTGTCCAGCAGGGCAACATGGC...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCGGTGTCGATGGAGAATaGCGCGGGGGTGCCTACCAG +
Preference number: 4 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCGVDGE*RGGAYQ
Trigger: CTGGTAGGCACCCCCGCGCCATTCTCCATCGACACC...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACACTGTGCCAGCCCCCTTaGTGTCGATGGAGAATGGCG +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTLCQPP*CRWRMA
Trigger: CGCCATTCTCCATCGACACCAAGGGGGCTGGCACAG...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGCCGACAGGATCTCAATaGTCAGCTCCGCCTCGCCTG +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLEPTGSQ*SAPPRL
Trigger: CAGGCGAGGCGGAGCTGACCATTGAGATCCTGTCGG...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACAACACGAGCCGTCACGTaGTTGCCGCCTGTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTTRAVT*LPPVAV
Trigger: AACAGCCACAGGCGGCAACCACGTGACGGCTCGTGT...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGCAGGCACCCAGGCCATaGCCTCCAATGGACACTGTG +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLEQAPRP*PPMDTV
Trigger: CACAGTGTCCATTGGAGGCCATGGCCTGGGTGCCTG...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGGTCTCCTGCCCAATCTaGATTCGAGGGCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWVSCPI*IRGPRQ
Trigger: CTGCCTGGGCCCTCGAATCCAGATTGGGCAGGAGAC...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCCTCCACAGGCACCACTaGCTCCTCTGTGGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCLHRHH*LLCGPV
Trigger: CACTGGGCCACAGAGGAGCCAGTGGTGCCTGTGGAG...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325888.13
CDS-3UTR CCA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCGTGTCAGGCGCTCCTaGGCAGACACCATCTGGAAC +
Preference number: 4 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWRVRRS*ADTIWN
Trigger: GTTCCAGATGGTGTCTGCCCAGGAGCGCCTGACACG...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCTGGGGCCCCATTTCCTaGGGCACAAAGCGCACGCTG +
Preference number: 4 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCWGPIS*GTKRTL
Trigger: CAGCGTGCGCTTTGTGCCCCAGGAAATGGGGCCCCA...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATTGACAGCGACCGTATaGGGCCCCATTTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTLTATV*GPISWG
Trigger: GCCCCAGGAAATGGGGCCCCATACGGTCGCTGTCAA...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACAGCAAAGGACGCTGGCTaGTTCACCTTGAGCCCCGTC +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTAKDAG*FTLSPV
Trigger: GACGGGGCTCAAGGTGAACCAGCCAGCGTCCTTTGC...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGCACGGCAAAGGACGCTaGCTGGTTCACCTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLEHGKGR*LVHLEP
Trigger: GGGCTCAAGGTGAACCAGCCAGCGTCCTTTGCCGTG...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGGGTCAGGAGGGTATCTaGCCGGCGGTGCAGTTTGAG +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLEGQEGI*PAVQFE
Trigger: CTCAAACTGCACCGCCGGCCAGATACCCTCCTGACC...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGAGAAATCAGGCCCCCTaGGAGCCTGGCTTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLERNQAP*EPGLGG
Trigger: TCCACCCAAGCCAGGCTCCCAGGGGGCCTGATTTCT...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACACCTCATCGTCACAGATaGCGTGCACAGCGTACTCCC +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTPHRHR*RAQRTP
Trigger: GGGAGTACGCTGTGCACGTCATCTGTGACGATGAGG...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGTGGGCTCATTGGCCTTaGGGCCTGTCTTCTCCACTC +
Preference number: 4 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWWAHWP*GLSSPL
Trigger: GAGTGGAGAAGACAGGCCTCAAGGCCAATGAGCCCA...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCGTAGCTGACAGCACATaGGCCATCACCATTGTCCTG +
Preference number: 4 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVVADST*AITIVL
Trigger: CAGGACAATGGTGATGGCTCATGTGCTGTCAGCTAC...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCCGTCCTTGTTGTCGGTaGTGTTGGGCCGTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCRPCCR*CWAVPS
Trigger: AGACGGCACGGCCCAACATCACCGACAACAAGGACG...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCAGGTGGCTGGCTTGTTaGCCATGCCATGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCRWLAC*PCHGSG
Trigger: GCCTGAGCCATGGCATGGTCAACAAGCCAGCCACCT...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGCATCGAAGCGCACGATaGTGCTGTAGTCTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLEHRSAR*CCSLQA
Trigger: CGCCTGGAGACTACAGCATCATCGTGCGCTTCGATG...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCAGAGCTTTGCCGTCCTaGCAGTCACGGTTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVRALPS*QSRLKL
Trigger: CAACTTCAACCGTGACTGGCAGGACGGCAAAGCTCT...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCGTGAAGTGGGCAGGCTaGAGCACGGTGTTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCVKWAG*STVLPC
Trigger: ACAGGGCAACACCGTGCTGCAGCCTGCCCACTTCAC...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATCGTCACAGATGACGTaGACAGCGTACTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTSSQMT*TAYSPG
Trigger: GCCTGGGGAGTACGCTGTGCACGTCATCTGTGACGA...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCAGGACACAGTGTACGTaGCATCCCCATTGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSRTQCT*HPHCPG
Trigger: TCCGGGACAATGGGGATGGCACGTACACTGTGTCCT...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCGTGAGCTCCCCTTTCTaGACCGCGAAGGGGATGACC +
Preference number: 4 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCVSSPF*TAKGMT
Trigger: GGTCATCCCCTTCGCGGTGCAGAAAGGGGAGCTCAC...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACACATGCTTGCCACTCTTaGGCACGCTCACCACGTGCT +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTHACHS*ARSPRA
Trigger: AGCACGTGGTGAGCGTGCGCAAGAGTGGCAAGCATG...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTGGGCTGGTCACCTGTaGAGTCATGTCCTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSWAGHL*SHVLRA
Trigger: AGCTCTCAGGACATGACTGCACAGGTGACCAGCCCA...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCCATCATGTTGGTGCCTaGTTTGCTGCAGTCCACGGT +
Preference number: 4 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVHHVGA*FAAVHG
Trigger: ACCGTGGACTGCAGCAAAGCAGGCACCAACATGATG...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGACAATGCTCCCCCACTaGTCAGCCCCGCCAGAAACT +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLETMLPH*SAPPET
Trigger: AGTTTCTGGCGGGGCTGAGCAGTGGGGGAGCATTGT...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGACACCCACAACACAATaGTCCCCCACTGCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWTPTTQ*SPTAQP
Trigger: GGGCTGAGCAGTGGGGGAGCATTGTGTTGTGGGTGT...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACAGTATCTGGCCGGCGGTaGAGTTTGAGGGTGACCTCA +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTVSGRR*SLRVTS
Trigger: TGAGGTCACCCTCAAACTGCACCGCCGGCCAGATAC...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTTCTCCAGCTTCATTTaGCGGAAGTTGGGGCGCGGA +
Preference number: 4 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSFSSFI*RKLGRG
Trigger: TCCGCGCCCCAACTTCCGCCAAATGAAGCTGGAGAA...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCCACGGTGTTGCCCTGTaGCTCGATGCCAGGCCCATA +
Preference number: 4 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCHGVAL*LDARPI
Trigger: TATGGGCCTGGCATCGAGCCACAGGGCAACACCGTG...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCCTGCGTTCAATGTTCTaGCCAGCAAAGAGCACGGTC +
Preference number: 4 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVLRSMF*PAKSTV
Trigger: GACCGTGCTCTTTGCTGGCCAGAACATTGAACGCAG...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACACACATGCACGGTATGTaGCCCCTCCATGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTHMHGM*PLHGRS
Trigger: AGACCTGCCATGGAGGGGCCACATACCGTGCATGTG...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGGCACAACCTCGCCCTTaGCTGTCCCTGCAAACTGCA +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLEAQPRP*LSLQTA
Trigger: TGCAGTTTGCAGGGACAGCCAAGGGCGAGGTTGTGC...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCGCCATGTTGCCCTGCTaGACAGCGGTGTACTTGACA +
Preference number: 4 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSAMLPC*TAVYLT
Trigger: TGTCAAGTACACCGCTGTCCAGCAGGGCAACATGGC...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGCCATCCGCGTTGTTGTaGATCAGCACCTCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLEPSALL*ISTSAL
Trigger: CAAGGCCGAGGTGCTGATCCACAACAACGCGGATGG...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCTGTAGGGCCCGTCAGTaGCTGGGGTGTAGTGGACAG +
Preference number: 4 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCCRARQ*LGCSGQ
Trigger: CTGTCCACTACACCCCAGCCACTGACGGGCCCTACA...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGCGTGGCACCTCCTaGTCAGCATACTTGACGGCT +
Preference number: 4 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWLRGTS*SAYLTA
Trigger: AGCCGTCAAGTATGCTGACCAGGAGGTGCCACGCAG...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCAGACCCGCACCTTGCTaGCGTCCCCGATCTCAGATG +
Preference number: 4 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCRPAPC*RPRSQM
Trigger: CATCTGAGATCGGGGACGCCAGCAAGGTGCGGGTCT...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATTCGATCTTGGCTTGTaGGGGCCCCTCGATGGAGAA +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTFDLGL*GPLDGE
Trigger: TTCTCCATCGAGGGGCCCTCACAAGCCAAGATCGAA...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGTTCGATCTTGGCTTGTaGGGGCCCCTCGATGGAGAA +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLEFDLGL*GPLDGE
Trigger: TTCTCCATCGAGGGGCCCTCACAAGCCAAGATCGAA...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCATCTTGCATCCACAGTaGACTCAGTGGTCACCTCCC +
Preference number: 4 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSILHPQ*TQWSPP
Trigger: GGGAGGTGACCACTGAGTTCACTGTGGATGCAAGAT...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACAGTGCATACCTCACCGTaGTGGTGCCGTCCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTVHTSP*WCRPCC
Trigger: ACAACAAGGACGGCACCATCACGGTGAGGTATGCAC...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGCGAGTGTCCACGATaGACTCTGCCACCTGGAATG +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTCECPR*TLPPGM
Trigger: CATTCCAGGTGGCAGAGTTCATCGTGGACACTCGCA...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGCCATGTCCTCACAGTTaGTGTCCACCTTGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLEPCPHS*CPPCLG
Trigger: GCCCAAGCAAGGTGGACATCAACTGTGAGGACATGG...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGCATTCTCGTGGGGGATaGAGCGGATGGTGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLEHSRGG*SGWCAC
Trigger: ACAAGCACACCATCCGCTTCATCCCCCACGAGAATG...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCGCTTGGGCGTCTGTTTaGGGGCATCCTCATCATCTT +
Preference number: 4 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSAWASV*GHPHHL
Trigger: AAGATGATGAGGATGCCCGCAAACAGACGCCCAAGC...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTTCTTGGGGTTCAGCTaGTTGGATCGAACAGGGGCA +
Preference number: 4 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSFLGFS*LDRTGA
Trigger: TGCCCCTGTTCGATCCAAGCAGCTGAACCCCAAGAA...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGGACCTTTTGCACTCCTaGCTCTGGGCTCACCTGTAC +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLEDLLHS*LWAHLY
Trigger: GTACAGGTGAGCCCAGAGGCAGGAGTGCAAAAGGTC...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACAACTGCACTCGGTAGGTaGCGTCCCCATTGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTTALGR*RPHCLS
Trigger: TGACAGACAATGGGGACGGCACCTACCGAGTGCAGT...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGCTTACAGGTGATCTCTaGCTTGGATGGGCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLELTGDL*LGWALH
Trigger: GTGGAGGGCCCATCCAAGGCAGAGATCACCTGTAAG...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGTGGGCTGGTCACCTGTaGAGTCATGTCCTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWWAGHL*SHVLRA
Trigger: AGCTCTCAGGACATGACTGCACAGGTGACCAGCCCA...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCAGCTCCCAGCTGAGCTaGATGACATGTGCAAAAGTC +
Preference number: 4 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVSSQLS*MTCAKV
Trigger: GACTTTTGCACATGTCATGCAGCTCAGCTGGGAGCT...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCAGGCGATGGCTTTCTTaGGGTTCAGCTGCTTGGATC +
Preference number: 4 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSRRWLS*GSAAWI
Trigger: GATCCAAGCAGCTGAACCCCAAGAAAGCCATCGCCT...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCGGCCTTCACCTTATCTaGGAAGCAGTCAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCGLHLI*EAVRWG
Trigger: GCCCCACCTGACTGCTTCCCAGATAAGGTGAAGGCC...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACACATAAGCACAGACCTTaGAGGGATCAGGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTHKHRP*RDQGAG
Trigger: TCCTGCCCCCTGATCCCTCCAAGGTCTGTGCTTATG...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGCGTGGTTGCCGCCTGTaGCTGTTAGGGATCTTGCAT +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLERGCRL*LLGILH
Trigger: ATGCAAGATCCCTAACAGCCACAGGCGGCAACCACG...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCGTGGTTGCCGCCTGTaGCTGTTAGGGATCTTGCAT +
Preference number: 4 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWRGCRL*LLGILH
Trigger: ATGCAAGATCCCTAACAGCCACAGGCGGCAACCACG...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGTCAGTGACACGTCCGTaGAGGTGCCCACATTCAGCT +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLESVTRP*RCPHSA
Trigger: AGCTGAATGTGGGCACCTCCACGGACGTGTCACTGA...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCATGCTGGCGGTCAGCTaGCTCAGATCACTCTCGGTG +
Preference number: 4 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCMLAVS*LRSLSV
Trigger: CACCGAGAGTGATCTGAGCCAGCTGACCGCCAGCAT...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACAGTCCCCGATCTCAGATaGCCCCACCAGGATCTTGAA +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTVPDLR*PHQDLE
Trigger: TTCAAGATCCTGGTGGGGCCATCTGAGATCGGGGAC...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCCACGAGCATCAATGGTaGACTCAGCGGGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCHEHQW*TQRACP
Trigger: TGGACAAGCCCGCTGAGTTCACCATTGATGCTCGTG...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACAGTAGCTGACAGCACATaGGCCATCACCATTGTCCTG +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTVADST*AITIVL
Trigger: CAGGACAATGGTGATGGCTCATGTGCTGTCAGCTAC...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGTGTTGTCCTTACAGGTaGTCTCTGCCTTGGATGGGC +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLECCPYR*SLPWMG
Trigger: GCCCATCCAAGGCAGAGATCACCTGTAAGGACAACA...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATCAGATCACTCTCGGTaGTCTTCAGTGACACGTCCG +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTSDHSR*SSVTRP
Trigger: CGGACGTGTCACTGAAGATCACCGAGAGTGATCTGA...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGGTCTCCCTTGCCAGCTaGACGAGCATCAATGGTGAA +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLEVSLAS*TSINGE
Trigger: TTCACCATTGATGCTCGTGCAGCTGGCAAGGGAGAC...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCAGTGGACAGTGTGGGTaGCATCTCCATTGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCSGQCG*HLHCPA
Trigger: TGCGGGACAATGGAGATGGCACCCACACTGTCCACT...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGAGGCGATGGCTTTCTTaGGGTTCAGCTGCTTGGATC +
Preference number: 4 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWRRWLS*GSAAWI
Trigger: GATCCAAGCAGCTGAACCCCAAGAAAGCCATCGCCT...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCCCACCTCGGTGCCAATaGCTTCCACCACAAAATCGG +
Preference number: 4 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCPPRCQ*LPPQNR
Trigger: CCGATTTTGTGGTGGAAGCCATTGGCACCGAGGTGG...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGGATGTCCACCTTGCTTaGGCCTTCAATACTCAGCCC +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLEDVHLA*AFNTQP
Trigger: GGGCTGAGTATTGAAGGCCCAAGCAAGGTGGACATC...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCTCAGATCACTCTCGGTaGTCTTCAGTGACACGTCCG +
Preference number: 4 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCSDHSR*SSVTRP
Trigger: CGGACGTGTCACTGAAGATCACCGAGAGTGATCTGA...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACAGGTGTTTGTAGTGTCTaGTTCTGTGCGTGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTGVCSV*FCACLG
Trigger: ACCCAGACACGCACAGAATCAGACACTACAAACACC...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCGTCTCCCTTGCCAGCTaGACGAGCATCAATGGTGAA +
Preference number: 4 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCVSLAS*TSINGE
Trigger: TTCACCATTGATGCTCGTGCAGCTGGCAAGGGAGAC...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACAATAAGTCACTGTCACTaGCATGTTGCCCTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTISHCH*HVALLD
Trigger: GTCCAGCAGGGCAACATGGCAGTGACAGTGACTTAT...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCTTTGCGATCCTCAAATaGAATCTCCGCTTTGCTAGG +
Preference number: 4 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVFAILK*NLRFAR
Trigger: CCTAGCAAAGCGGAGATTGCATTTGAGGATCGCAAA...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGCCATCATCATGTTGGTaGCTGCTTTGCTGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLEPSSCW*LLCCSP
Trigger: TGGACTGCAGCAAAGCAGGCACCAACATGATGATGG...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGAGCTCCCAGCTGAGCTaGATGACATGTGCAAAAGTC +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLESSQLS*MTCAKV
Trigger: GACTTTTGCACATGTCATGCAGCTCAGCTGGGAGCT...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCACATGGGCATGGAGATaGAGTAGTGCAGGATCAGCG +
Preference number: 4 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCTWAWR*SSAGSA
Trigger: CGCTGATCCTGCACTACTCCATCTCCATGCCCATGT...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGAGTAGGTGGGTTTGTTaGCCACATTGCCCACAGGTT +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLESRWVC*PHCPQV
Trigger: AACCTGTGGGCAATGTGGCCAACAAACCCACCTACT...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCTCAAAGGTACCGTCATaGTTCTCAACCACATCCACA +
Preference number: 4 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVSKVPS*FSTTST
Trigger: TGTGGATGTGGTTGAGAACCATGACGGTACCTTTGA...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATACTTGATCCCCATCTaGTGCAGGCCTTTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTYLIPI*CRPFSV
Trigger: CACTGAGAAAGGCCTGCACCAGATGGGGATCAAGTA...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACACTGGAACCAGTTTCCTaGGATCTTGAGGTTGAGGTC +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTLEPVS*DLEVEV
Trigger: GACCTCAACCTCAAGATCCCAGGAAACTGGTTCCAG...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACAAGTCCCCTAGAAAGCTaGGCCTCGCAGTGTGTAAAA +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTSPLES*ASQCVK
Trigger: TTTTACACACTGCGAGGCCCAGCTTTCTAGGGGACT...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGAGTCCCCTAGAAAGCTaGGCCTCGCAGTGTGTAAAA +
Preference number: 4 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWSPLES*ASQCVK
Trigger: TTTTACACACTGCGAGGCCCAGCTTTCTAGGGGACT...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACAAGGAGACAGCATAGGTaGGATCCTTGTCATTGTTGG +
Preference number: 4 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTRRQHR*DPCHCW
Trigger: CCAACAATGACAAGGATCGCACCTATGCTGTCTCCT...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR GCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGGAGCTGCATGACATGTaGAAAAGTCCCCTAGAAAGC +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLEELHDM*KSPLES
Trigger: GCTTTCTAGGGGACTTTTGCACATGTCATGCAGCTC...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCATGAACTCTGCCACCTaGAATGTGTGTCCCTCGGAA +
Preference number: 4 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCMNSAT*NVCPSE
Trigger: TTCCGAGGGACACACATTCCAGGTGGCAGAGTTCAT...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCCTGGAACCAGTTTCCTaGGATCTTGAGGTTGAGGTC +
Preference number: 4 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCLEPVS*DLEVEV
Trigger: GACCTCAACCTCAAGATCCCAGGAAACTGGTTCCAG...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCCCACCATCATCATGTTaGTGCCTGCTTTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCPPSSC*CLLCCS
Trigger: ACTGCAGCAAAGCAGGCACCAACATGATGATGGTGG...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CCA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCCAGCCGCACTTTATTTaGAGTTTTCCACCTAAGCAG +
Preference number: 4 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSQPHFI*SFPPKQ
Trigger: CTGCTTAGGTGGAAAACTCCAAATAAAGTGCGGCTG...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGTTGCTATTAAGGCCCTaGACTTTGATTTTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: VWHICVCVCVCVMCVWLELLLRP*TLILLR
Trigger: CCTCAGCAAAATCAAAGTTCAGGGCCTTAATAGCAA...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR TCA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGTTGCTATTAAGGCCCTaGACTTTGATTTTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWLLLRP*TLILLR
Trigger: CCTCAGCAAAATCAAAGTTCAGGGCCTTAATAGCAA...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CCA 90 bp GCTGCGCTGCGCTGCTCTCCTCTCCAACTTCTCTCGCGCCGGGGCTaGCGGGGCTCGGCGAGGCTCGGCGGGCCTCCTAGGCGCTCGGCC +
Preference number: 5 (lower is better)
Translates to: AALRCSPLQLLSRRG*RGSARLGGPPRRSA
Trigger: GGCCGAGCGCCTAGGAGGCCCGCCGAGCCTCGCCGAGCCCCGCCAGCCCCGGCGCGAGAGAAGTTGGAGAGGAGAGCAGCGCAGCGCAGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS GCA 90 bp GGGCTGTCGGGCGCTGTTGGGGCGCGACCACGGGACTCGCTGCGCTaGGCTGCTCTCCTCTCCAACTTCTCTCGCGCCGGGGCTGGCGGG +
Preference number: 5 (lower is better)
Translates to: GLSGAVGARPRDSLR*AALLSNFSRAGAGG
Trigger: CCCGCCAGCCCCGGCGCGAGAGAAGTTGGAGAGGAGAGCAGCGCAGCGCAGCGAGTCCCGTGGTCGCGCCCCAACAGCGCCCGACAGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CCA 90 bp GGGCTAGGGCCGCGGTTTGGGCTATCGGGGGCTGTCGGGCGCTGTTaGGGCGCGACCACGGGACTCGCTGCGCTGCGCTGCTCTCCTCTC +
Preference number: 5 (lower is better)
Translates to: GLGPRFGLSGAVGRC*GATTGLAALRCSPL
Trigger: GAGAGGAGAGCAGCGCAGCGCAGCGAGTCCCGTGGTCGCGCCCCAACAGCGCCCGACAGCCCCCGATAGCCCAAACCGCGGCCCTAGCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CCA 90 bp CCAGGCCGAGGCCGGCGTCTGAGTAGCCGCTGTTGTTCATCATGCTaGCGCGGGCTGGGGGTGCGGCCGGGGCTAGGGCCGCGGTTTGGG +
Preference number: 5 (lower is better)
Translates to: PGRGRRLSSRCCSSC*RGLGVRPGLGPRFG
Trigger: CCCAAACCGCGGCCCTAGCCCCGGCCGCACCCCCAGCCCGCGCCAGCATGATGAACAACAGCGGCTACTCAGACGCCGGCCTCGGCCTGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS TCA 90 bp CCTCCACCCGCACCTCGCGCTTTGTCTCCCCGCCCCGCGTCTTGCTaGTCTCCGTGCGCTCCGTGCGGGTGTAGGTGTGGCTGCTGCGTG +
Preference number: 5 (lower is better)
Translates to: PPPAPRALSPRPASC*SPCAPCGCRCGCCV
Trigger: CACGCAGCAGCCACACCTACACCCGCACGGAGCGCACGGAGATCAGCAAGACGCGGGGCGGGGAGACAAAGCGCGAGGTGCGGGTGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCCGCCTGGCTCCAGCTaGCAGGGGATGGGCCGGCGA +
Preference number: 5 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLPPGSS*QGMGRR
Trigger: TCGCCGGCCCATCCCCTGCAAGCTGGAGCCAGGCGG...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGGGGATGCCAGAGGCGTaGAGGCCTGGGCCGCTGGCC +
Preference number: 5 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWGMPEA*RPGPLA
Trigger: GGCCAGCGGCCCAGGCCTCAACGCCTCTGGCATCCC...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGCCCGCACCTCGCGCTTaGTCTCCCCGCCCCGCGTCT +
Preference number: 5 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWPAPRA*SPRPAS
Trigger: AGACGCGGGGCGGGGAGACAAAGCGCGAGGTGCGGG...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CCA 90 bp CAGCCTGGGCTTCCGCTCCACCGCCTGGCTCCAGCTTGCAGGGGATaGGCCGGCGAGAGGGCGAAGTCATCCGCACATCCAGTTGGCCCT +
Preference number: 5 (lower is better)
Translates to: QPGLPLHRLAPACRG*AGERAKSSAHPVGP
Trigger: AGGGCCAACTGGATGTGCGGATGACTTCGCCCTCTCGCCGGCCCATCCCCTGCAAGCTGGAGCCAGGCGGTGGAGCGGAAGCCCAGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGGGCTGTCGGGCGCTGTaGGGGCGCGACCACGGGACT +
Preference number: 5 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQGCRAL*GRDHGT
Trigger: AGTCCCGTGGTCGCGCCCCAACAGCGCCCGACAGCC...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGCCGCCTGGCTCCAGCTaGCAGGGGATGGGCCGGCGA +
Preference number: 5 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRPPGSS*QGMGRR
Trigger: TCGCCGGCCCATCCCCTGCAAGCTGGAGCCAGGCGG...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGAGGCAGGGCTCCTCGTaGCCCGAGGGGGCACGGATG +
Preference number: 5 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLRQGSS*PEGARM
Trigger: CATCCGTGCCCCCTCGGGCAACGAGGAGCCCTGCCT...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGCCCGCACCTCGCGCTTaGTCTCCCCGCCCCGCGTCT +
Preference number: 5 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRPAPRA*SPRPAS
Trigger: AGACGCGGGGCGGGGAGACAAAGCGCGAGGTGCGGG...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS TCA 90 bp GGACGGCATCTCGTCTGTCTCATCGCCCAGGCCGAGGCCGGCGTCTaGGTAGCCGCTGTTGTTCATCATGCTGGCGCGGGCTGGGGGTGC +
Preference number: 5 (lower is better)
Translates to: GRHLVCLIAQAEAGV*VAAVVHHAGAGWGC
Trigger: GCACCCCCAGCCCGCGCCAGCATGATGAACAACAGCGGCTACTCAGACGCCGGCCTCGGCCTGGGCGATGAGACAGACGAGATGCCGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS TCA 90 bp TGTAGACCAGCACCTCGCCCACGCCCGCGTCCACCGTCTGCACGGTaGAGTGGGCAGGCTGCAGCACGGTGTTGCCCTGTGGCTCGATGC +
Preference number: 5 (lower is better)
Translates to: CRPAPRPRPRPPSAR*SGQAAARCCPVARC
Trigger: GCATCGAGCCACAGGGCAACACCGTGCTGCAGCCTGCCCACTTCACCGTGCAGACGGTGGACGCGGGCGTGGGCGAGGTGCTGGTCTACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CCA 90 bp AGGTGGCTGCCTCACCGACCTTGCCGCGCTCCAGGCCCGGTCCACTaGCCCGCACCTTGCTCGGGTCAAACACAGGCCGAATGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: RWLPHRPCRAPGPVH*PAPCSGQTQAEWWL
Trigger: AAGCCACCATTCGGCCTGTGTTTGACCCGAGCAAGGTGCGGGCCAGTGGACCGGGCCTGGAGCGCGGCAAGGTCGGTGAGGCAGCCACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGAGGGCGCCCAGAGCTTaGCCGTCCTGCCAGTCACGG +
Preference number: 5 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWRAPRA*PSCQSR
Trigger: CCGTGACTGGCAGGACGGCAAAGCTCTGGGCGCCCT...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGTTCTCCACGGGCTGGTaGGGGTCCCAGGCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: ATRETRPSPRGQEGIWPAFSTGW*GSQASQ
Trigger: CTGGGAGGCCTGGGACCCCAACCAGCCCGTGGAGAA...CGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGGAGGCGCGGCAGGCGTaGGGGTTACAGGCTTCCGAC +
Preference number: 5 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLEARQA*GLQASD
Trigger: GTCGGAAGCCTGTAACCCCAACGCCTGCCGCGCCTC...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CTGGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCCCCTCGGAAAGCCCCTaGCCCCAGACCCGCACCTTG +
Preference number: 5 (lower is better)
Translates to: LAWVECTSLRPVHVPGHSPSESP*PQTRTL
Trigger: CAAGGTGCGGGTCTGGGGCAAGGGGCTTTCCGAGGG...GGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGCCTCCGGCCCGCACCTaGTGGGCACCACCTTCACCC +
Preference number: 5 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQPPART*WAPPSP
Trigger: GGGTGAAGGTGGTGCCCACAAGGTGCGGGCCGGAGG...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGAGGTCGGTCAGGCGCTaGCCCACGCACTTGAGGTGC +
Preference number: 5 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWRSVRR*PTHLRC
Trigger: GCACCTCAAGTGCGTGGGCAAGCGCCTGACCGACCT...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CTGGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCCCAAGCAGCCGCTGCTaGGGCGTCTGTTTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: LAWVECTSLRPVHVPGHSPSSRC*GVCLRA
Trigger: TGCCCGCAAACAGACGCCCAAGCAGCGGCTGCTTGG...GGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTCTCCACGGGCTGGTaGGGGTCCCAGGCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQFSTGW*GSQASQ
Trigger: CTGGGAGGCCTGGGACCCCAACCAGCCCGTGGAGAA...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGGGCTGCAGCACGGTGTaGCCCTGTGGCTCGATGCCA +
Preference number: 5 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWGCSTV*PCGSMP
Trigger: TGGCATCGAGCCACAGGGCAACACCGTGCTGCAGCC...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CTGGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTTCACGCGAACACCCTaGGGCTGCAGGCCTCGCCCA +
Preference number: 5 (lower is better)
Translates to: LAWVECTSLRPVHVPGHSFTRTP*GCRPRP
Trigger: TGGGCGAGGCCTGCAGCCCAAGGGTGTTCGCGTGAA...GGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCCCCTTGACCGTGACCTaGAGCTCCCCGCTGCCGGCA +
Preference number: 5 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTPLTVT*SSPLPA
Trigger: TGCCGGCAGCGGGGAGCTCAAGGTCACGGTCAAGGG...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGACACGGGTGGGGAATTaGGGCACGGGATGCCCGCCA +
Preference number: 5 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLTRVGN*GTGCPP
Trigger: TGGCGGGCATCCCGTGCCCAAATTCCCCACCCGTGT...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CTGGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCCGAGCCGTCACGTGGTaGCCGCCTGTGGCTGTTAGG +
Preference number: 5 (lower is better)
Translates to: LAWVECTSLRPVHVPGHSRAVTW*PPVAVR
Trigger: CCTAACAGCCACAGGCGGCAACCACGTGACGGCTCG...GGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCTTGGCCCCCGAGGGGTaGAGCACACGAGCCGTCACG +
Preference number: 5 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTLAPEG*STRAVT
Trigger: CGTGACGGCTCGTGTGCTCAACCCCTCGGGGGCCAA...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCAGGTGATCTCTGCCTaGGATGGGCCCTCCACGGCC +
Preference number: 5 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLQVISA*DGPSTA
Trigger: GGCCGTGGAGGGCCCATCCAAGGCAGAGATCACCTG...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGCCCTGGGAGCCTGGCTaGGGTGGAGTGCACATCGCT +
Preference number: 5 (lower is better)
Translates to: ATRETRPSPRGQEGIWPAPWEPG*GGVHIA
Trigger: AGCGATGTGCACTCCACCCAAGCCAGGCTCCCAGGG...CGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS TCA 90 bp CCTCCCGCAGGACACCGTGTGGCTCAACACCAGGCCCTGAGACCTTaGCGCCACTGGTATCGACCGCAGGCTGCACATGGACACGGGTGG +
Preference number: 5 (lower is better)
Translates to: PPAGHRVAQHQALRP*RHWYRPQAAHGHGW
Trigger: CCACCCGTGTCCATGTGCAGCCTGCGGTCGATACCAGTGGCGTCAAGGTCTCAGGGCCTGGTGTTGAGCCACACGGTGTCCTGCGGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGAACGTGCTGTCACCCTaGTCCTCCAGGGCCACCTCC +
Preference number: 5 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLNVLSP*SSRATS
Trigger: GGAGGTGGCCCTGGAGGACAAGGGTGACAGCACGTT...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CTGGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCAACGTGCTGTCACCCTaGTCCTCCAGGGCCACCTCC +
Preference number: 5 (lower is better)
Translates to: LAWVECTSLRPVHVPGHSNVLSP*SSRATS
Trigger: GGAGGTGGCCCTGGAGGACAAGGGTGACAGCACGTT...GGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCTTCACGCGAACACCCTaGGGCTGCAGGCCTCGCCCA +
Preference number: 5 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTFTRTP*GCRPRP
Trigger: TGGGCGAGGCCTGCAGCCCAAGGGTGTTCGCGTGAA...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCCCAGGCCCGGACCTTTaGCACTCCTGCCTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTPGPDL*HSCLWA
Trigger: AGCCCAGAGGCAGGAGTGCAAAAGGTCCGGGCCTGG...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCACCCGGAAGGGGCTCTaGGGCACGTTTACGCCTCCC +
Preference number: 5 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTTRKGL*GTFTPP
Trigger: GGGAGGCGTAAACGTGCCCAAGAGCCCCTTCCGGGT...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGTGGGATGGGTCCACCTaGATGTGGAAGGGGCTGGCG +
Preference number: 5 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLWDGST*MWKGLA
Trigger: CGCCAGCCCCTTCCACATCAAGGTGGACCCATCCCA...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CTGGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCACATCCAGCTTGGCCTaGCCGGCTCCCTTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: LAWVECTSLRPVHVPGHSTSSLA*PAPLVS
Trigger: GCTGACCAAGGGAGCCGGCAAGGCCAAGCTGGATGT...GGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGACATCCAGCTTGGCCTaGCCGGCTCCCTTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLTSSLA*PAPLVS
Trigger: GCTGACCAAGGGAGCCGGCAAGGCCAAGCTGGATGT...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CTGGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCGGGCGCCCGGCCAGCTaGACTGCAATCCACTGTGAA +
Preference number: 5 (lower is better)
Translates to: LAWVECTSLRPVHVPGHSGRPAS*TAIHCE
Trigger: TTCACAGTGGATTGCAGTCAAGCTGGCCGGGCGCCC...GGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGTGGGTGCCATCTCCATaGTCCCGCACCTCCACAGGC +
Preference number: 5 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLWVPSP*SRTSTG
Trigger: GCCTGTGGAGGTGCGGGACAATGGAGATGGCACCCA...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCCCCTCACCGGCTGCCTaGGCATCCACCGTGATCACC +
Preference number: 5 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTPSPAA*ASTVIT
Trigger: GGTGATCACGGTGGATGCCAAGGCAGCCGGTGAGGG...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGATCCCAATGTGCCGGTaGGGCAGGCGCTTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWIPMCR*GRRFSR
Trigger: CCTGCTGAAGCGCCTGCCCAACCGGCACATTGGGAT...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTCTGCGGCTTCCACCTaGCCCGATGGGCTGGTCACC +
Preference number: 5 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQSAAST*PDGLVT
Trigger: GGTGACCAGCCCATCGGGCAAGGTGGAAGCCGCAGA...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CTGGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGCCACGGTACTaGACAGCGACCGTATGGGGC +
Preference number: 5 (lower is better)
Translates to: LAWVECTSLRPVHVPGHSCWPRY*TATVWG
Trigger: GCCCCATACGGTCGCTGTCAAGTACCGTGGCCAGCA...GGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCCCTCCGGCCCGCACCTaGTGGGCACCACCTTCACCC +
Preference number: 5 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLAPPART*WAPPSP
Trigger: GGGTGAAGGTGGTGCCCACAAGGTGCGGGCCGGAGG...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGGGCCGGCGGTGCAGTTaGAGGGTGACCTCACACACA +
Preference number: 5 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWGRRCS*RVTSHT
Trigger: TGTGTGTGAGGTCACCCTCAAACTGCACCGCCGGCC...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CCA 90 bp CAGGGCTCCTCGTTGCCCGAGGGGGCACGGATGCTGGCGGTCAGCTaGCTCAGATCACTCTCGGTGATCTTCAGTGACACGTCCGTGGAG +
Preference number: 5 (lower is better)
Translates to: QGSSLPEGARMLAVS*LRSLSVIFSDTSVE
Trigger: CTCCACGGACGTGTCACTGAAGATCACCGAGAGTGATCTGAGCCAGCTGACCGCCAGCATCCGTGCCCCCTCGGGCAACGAGGAGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CCA 90 bp ATCACGCCCCGGGCACCGTTCAGCTGCACGGCAAAGGACGCTGGCTaGTTCACCTTGAGCCCCGTCTCCTGGAGGCTGGTGACAGTGAGA +
Preference number: 5 (lower is better)
Translates to: ITPRAPFSCTAKDAG*FTLSPVSWRLVTVR
Trigger: TCTCACTGTCACCAGCCTCCAGGAGACGGGGCTCAAGGTGAACCAGCCAGCGTCCTTTGCCGTGCAGCTGAACGGTGCCCGGGGCGTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCAGGGCGCCCAGAGCTTaGCCGTCCTGCCAGTCACGG +
Preference number: 5 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLARAPRA*PSCQSR
Trigger: CCGTGACTGGCAGGACGGCAAAGCTCTGGGCGCCCT...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CTGGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCAAGGTGCCGTCGCCGTaGGGGATCACCTTGATGTCG +
Preference number: 5 (lower is better)
Translates to: LAWVECTSLRPVHVPGHSKVPSP*GITLMS
Trigger: CGACATCAAGGTGATCCCCAACGGCGACGGCACCTT...GGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGATGCTCACGTCGCCTaGCCCCGCCTCGCTGCAGTC +
Preference number: 5 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLADAHVA*PRLAAV
Trigger: GACTGCAGCGAGGCGGGGCAAGGCGACGTGAGCATC...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGCGCACAACCTCGCCCTaGGCTGTCCCTGCAAACTGC +
Preference number: 5 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRRTTSP*AVPANC
Trigger: GCAGTTTGCAGGGACAGCCAAGGGCGAGGTTGTGCG...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGACTGTCACTGCCATGTaGCCCTGCTGGACAGCGGTG +
Preference number: 5 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWTVTAM*PCWTAV
Trigger: CACCGCTGTCCAGCAGGGCAACATGGCAGTGACAGT...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGACTGTCACTGCCATGTaGCCCTGCTGGACAGCGGTG +
Preference number: 5 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLTVTAM*PCWTAV
Trigger: CACCGCTGTCCAGCAGGGCAACATGGCAGTGACAGT...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTACACGGGTGGGGAATTaGGGCACGGGATGCCCGCCA +
Preference number: 5 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSTRVGN*GTGCPP
Trigger: TGGCGGGCATCCCGTGCCCAAATTCCCCACCCGTGT...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTCGAGCCGTCACGTGGTaGCCGCCTGTGGCTGTTAGG +
Preference number: 5 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSRAVTW*PPVAVR
Trigger: CCTAACAGCCACAGGCGGCAACCACGTGACGGCTCG...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGGGAGGACCTTGATCTaGAAGGGGCTGCGTGGCACC +
Preference number: 5 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRGRTLI*KGLRGT
Trigger: GGTGCCACGCAGCCCCTTCAAGATCAAGGTCCTCCC...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGATGCCAGAGGCGTaGAGGCCTGGGCCGCTGGCC +
Preference number: 5 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGGMPEA*RPGPLA
Trigger: GGCCAGCGGCCCAGGCCTCAACGCCTCTGGCATCCC...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGACTGTGACGAGGCACTaGCTGGCATCCCCAGTGGGC +
Preference number: 5 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRTVTRH*LASPVG
Trigger: GCCCACTGGGGATGCCAGCAAGTGCCTCGTCACAGT...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCATGGTGATGACGTACTaGCCCGGCTCGGGCGCTGTG +
Preference number: 5 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTMVMTY*PGSGAV
Trigger: CACAGCGCCCGAGCCGGGCAAGTACGTCATCACCAT...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCATCCCAATGTGCCGGTaGGGCAGGCGCTTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTIPMCR*GRRFSR
Trigger: CCTGCTGAAGCGCCTGCCCAACCGGCACATTGGGAT...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGACATGCTTGCCACTCTaGCGCACGCTCACCACGTGC +
Preference number: 5 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWTCLPL*RTLTTC
Trigger: GCACGTGGTGAGCGTGCGCAAGAGTGGCAAGCATGT...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGGCCCCACCAGGATCTaGAAGGGGCTGTTGGTGACA +
Preference number: 5 (lower is better)
Translates to: ATRETRPSPRGQEGIWPAGPTRI*KGLLVT
Trigger: TGTCACCAACAGCCCCTTCAAGATCCTGGTGGGGCC...CGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGCCTGGGATCTTGAGGTaGAGGTCACAGGTGCTGCCG +
Preference number: 5 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWPGILR*RSQVLP
Trigger: CGGCAGCACCTGTGACCTCAACCTCAAGATCCCAGG...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTCCCTGGGAGCCTGGCTaGGGTGGAGTGCACATCGCT +
Preference number: 5 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSPWEPG*GGVHIA
Trigger: AGCGATGTGCACTCCACCCAAGCCAGGCTCCCAGGG...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS TCA 90 bp CCTGTACCTCAAAGGGGCTGCGAGGGATGGCGTAGCCGCCCCACGTaGTGGTCACCACATACTTCCCAGGCACCACCGGGTAGTACTCGC +
Preference number: 5 (lower is better)
Translates to: PVPQRGCEGWRSRPT*WSPHTSQAPPGSTR
Trigger: GCGAGTACTACCCGGTGGTGCCTGGGAAGTATGTGGTGACCATCACGTGGGGCGGCTACGCCATCCCTCGCAGCCCCTTTGAGGTACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS TCA 90 bp TGGTGTCGATGGAGAATGGCGCGGGGGTGCCTACCAGTCCACCCTTaGGACCCGGGCCATAAGCACAGACCTTGGAGGGATCAGGGGGCA +
Preference number: 5 (lower is better)
Translates to: WCRWRMARGCLPVHP*DPGHKHRPWRDQGA
Trigger: TGCCCCCTGATCCCTCCAAGGTCTGTGCTTATGGCCCGGGTCTCAAGGGTGGACTGGTAGGCACCCCCGCGCCATTCTCCATCGACACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS GCA 90 bp GGGCTGTTGGTGACATGCTTGCCACTCTTGCGCACGCTCACCACGTaGTCCCCGACCTCCTTGGGGGTGAAGGAGATCCCAATGTGCCGG +
Preference number: 5 (lower is better)
Translates to: GLLVTCLPLLRTLTT*SPTSLGVKEIPMCR
Trigger: CCGGCACATTGGGATCTCCTTCACCCCCAAGGAGGTCGGGGAGCACGTGGTGAGCGTGCGCAAGAGTGGCAAGCATGTCACCAACAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CCA 90 bp CATTGCCCACAGGTTCCAGGCCAGGGCCACGGGCTGACACCTTGTTaGCATCTCCCAGGGCCATGCCCACGTTCACCTCAAAGGGACTGC +
Preference number: 5 (lower is better)
Translates to: HCPQVPGQGHGLTPC*HLPGPCPRSPQRDC
Trigger: GCAGTCCCTTTGAGGTGAACGTGGGCATGGCCCTGGGAGATGCCAACAAGGTGTCAGCCCGTGGCCCTGGCCTGGAACCTGTGGGCAATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CCA 90 bp ACTGCGGGTGATGGGGGCACCCGCAAAGGCCACATGCACGGTATGTaGCCCCTCCATGGCAGGTCTGTATGTGCAGCGGAACGTGCTGTC +
Preference number: 5 (lower is better)
Translates to: TAGDGGTRKGHMHGM*PLHGRSVCAAERAV
Trigger: GACAGCACGTTCCGCTGCACATACAGACCTGCCATGGAGGGGCCACATACCGTGCATGTGGCCTTTGCGGGTGCCCCCATCACCCGCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CCA 90 bp ATCAATCACGCCCCGGGCACCGTTCAGCTGCACGGCAAAGGACGCTaGCTGGTTCACCTTGAGCCCCGTCTCCTGGAGGCTGGTGACAGT +
Preference number: 5 (lower is better)
Translates to: INHAPGTVQLHGKGR*LVHLEPRLLEAGDS
Trigger: ACTGTCACCAGCCTCCAGGAGACGGGGCTCAAGGTGAACCAGCCAGCGTCCTTTGCCGTGCAGCTGAACGGTGCCCGGGGCGTGATTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGCGCTTGCCCACGCACTaGAGGTGCTCATTGCACCAG +
Preference number: 5 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQRLPTH*RCSLHQ
Trigger: CTGGTGCAATGAGCACCTCAAGTGCGTGGGCAAGCG...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGGTTCTCCAGCTTCATTaGGCGGAAGTTGGGGCGCGG +
Preference number: 5 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQVLQLH*AEVGAR
Trigger: CCGCGCCCCAACTTCCGCCAAATGAAGCTGGAGAAC...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTCTATGGACACGAGCTaGATGTGCTCGCGCTCGAGG +
Preference number: 5 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWSMDTS*MCSRSR
Trigger: CCTCGAGCGCGAGCACATCAAGCTCGTGTCCATAGA...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGACAGGGGCACCAGGTTaGAGCTTGGCCTTGGGGAAC +
Preference number: 5 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQTGAPG*SLALGN
Trigger: GTTCCCCAAGGCCAAGCTCAAACCTGGTGCCCCTGT...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGGGTTTGTTGGCCACATaGCCCACAGGTTCCAGGCCA +
Preference number: 5 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLGLLAT*PTGSRP
Trigger: TGGCCTGGAACCTGTGGGCAATGTGGCCAACAAACC...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTGTGCCCTTTGGCCCCTaGACCGTGACCTTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSVPFGP*TVTLSS
Trigger: GGAGCTCAAGGTCACGGTCAAGGGGCCAAAGGGCAC...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCGTGAACTCAGCGGGCTaGTCCACGATGCAGCCGGTA +
Preference number: 5 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTVNSAG*STMQPV
Trigger: TACCGGCTGCATCGTGGACAAGCCCGCTGAGTTCAC...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGGCGGGGATCTCCTGGTaGGCAAACAGCACCATGATG +
Preference number: 5 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWAGISW*ANSTMM
Trigger: CATCATGGTGCTGTTTGCCAACCAGGAGATCCCCGC...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGAACTGCACATCCAGCTaGGCCTTGCCGGCTCCCTTG +
Preference number: 5 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRNCTSS*ALPAPL
Trigger: CAAGGGAGCCGGCAAGGCCAAGCTGGATGTGCAGTT...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGACTCGGAAGGGGCTCTaGGGCACAGCGACCTCATCA +
Preference number: 5 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRTRKGL*GTATSS
Trigger: TGATGAGGTCGCTGTGCCCAAGAGCCCCTTCCGAGT...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTGGGAGGACCTTGATCTaGAAGGGGCTGCGTGGCACC +
Preference number: 5 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSGRTLI*KGLRGT
Trigger: GGTGCCACGCAGCCCCTTCAAGATCAAGGTCCTCCC...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTCGGATGTTGGCCTTCTaGGGCTTACCCTCGGGGTCC +
Preference number: 5 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSRMLAF*GLPSGS
Trigger: GGACCCCGAGGGTAAGCCCAAGAAGGCCAACATCCG...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGATGGTGCCGTCCTTGTaGTCGGTGATGTTGGGCCGT +
Preference number: 5 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWMVPSL*SVMLGR
Trigger: ACGGCCCAACATCACCGACAACAAGGACGGCACCAT...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGGTGATGGTGCCGTCCTaGTTGTCGGTGATGTTGGGC +
Preference number: 5 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWVMVPS*LSVMLG
Trigger: GCCCAACATCACCGACAACAAGGACGGCACCATCAC...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGCTCCCAGGGATGTGGTaGCCGTCATACTTGATCCCC +
Preference number: 5 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWLPGMW*PSYLIP
Trigger: GGGGATCAAGTATGACGGCAACCACATCCCTGGGAG...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CTGGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCAAGGTGGCTGGCTTGTaGACCATGCCATGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: LAWVECTSLRPVHVPGHSKVAGL*TMPWLR
Trigger: CCTGAGCCATGGCATGGTCAACAAGCCAGCCACCTT...GGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGCTGTTGGTGACATGCTaGCCACTCTTGCGCACGCTC +
Preference number: 5 (lower is better)
Translates to: ATRETRPSPRGQEGIWPALLVTC*PLLRTL
Trigger: GAGCGTGCGCAAGAGTGGCAAGCATGTCACCAACAG...CGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGCTGTTGGTGACATGCTaGCCACTCTTGCGCACGCTC +
Preference number: 5 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWLLVTC*PLLRTL
Trigger: GAGCGTGCGCAAGAGTGGCAAGCATGTCACCAACAG...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS GCA 90 bp CCAGATGCACGCCCTCCTCGTAGGCGGTGTACTGCACTCGGTAGGTaGCGTCCCCATTGTCTGTCACATAGGTGTCTGTCTTGGCCCCCG +
Preference number: 5 (lower is better)
Translates to: PDARPPRRRCTALGR*RPHCLSHRCLSWPP
Trigger: CGGGGGCCAAGACAGACACCTATGTGACAGACAATGGGGACGGCACCTACCGAGTGCAGTACACCGCCTACGAGGAGGGCGTGCATCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CCA 90 bp TGGGGGCACCCGCAAAGGCCACATGCACGGTATGTGGCCCCTCCATaGCAGGTCTGTATGTGCAGCGGAACGTGCTGTCACCCTTGTCCT +
Preference number: 5 (lower is better)
Translates to: WGHPQRPHARYVAPP*QVCMCSGTCCHPCP
Trigger: AGGACAAGGGTGACAGCACGTTCCGCTGCACATACAGACCTGCCATGGAGGGGCCACATACCGTGCATGTGGCCTTTGCGGGTGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CTGGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTTCATTTGGCGGAAGTaGGGGCGCGGATGGAACTTG +
Preference number: 5 (lower is better)
Translates to: LAWVECTSLRPVHVPGHSFIWRK*GRGWNL
Trigger: CAAGTTCCATCCGCGCCCCAACTTCCGCCAAATGAA...GGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTGTTCTCCAGCTTCATTaGGCGGAAGTTGGGGCGCGG +
Preference number: 5 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSVLQLH*AEVGAR
Trigger: CCGCGCCCCAACTTCCGCCAAATGAAGCTGGAGAAC...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGCCATCCACGATGGCCTaGCTGTCTATGGACACGAGC +
Preference number: 5 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQPSTMA*LSMDTS
Trigger: GCTCGTGTCCATAGACAGCAAGGCCATCGTGGATGG...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGTGCTTGGGCGTCTGTTaGCGGGCATCCTCATCATCT +
Preference number: 5 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLCLGVC*RASSSS
Trigger: AGATGATGAGGATGCCCGCAAACAGACGCCCAAGCA...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGAAGAGCACGGTCACCTaGTGTAACCCAGCGACCTTG +
Preference number: 5 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLKSTVT*CNPATL
Trigger: CAAGGTCGCTGGGTTACACAAGGTGACCGTGCTCTT...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGACAAAATCGGCTGACTaGCCCACCTGGCCAGTCTCC +
Preference number: 5 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRTKSAD*PTWPVS
Trigger: GGAGACTGGCCAGGTGGGCAAGTCAGCCGATTTTGT...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGTGCCATCCGCGTTGTaGTGGATCAGCACCTCGGCC +
Preference number: 5 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLAVPSAL*WISTSA
Trigger: GGCCGAGGTGCTGATCCACAACAACGCGGATGGCAC...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGAATCGGTTGGCCTTGTaGACCAAGCCACCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQNRLAL*TKPPSR
Trigger: CCTGGAGGGTGGCTTGGTCAACAAGGCCAACCGATT...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCCGGATGTTGGCCTTCTaGGGCTTACCCTCGGGGTCC +
Preference number: 5 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLARMLAF*GLPSGS
Trigger: GGACCCCGAGGGTAAGCCCAAGAAGGCCAACATCCG...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCCCATTGTCCCGGATGTaGGCCTTCTTGGGCTTACCC +
Preference number: 5 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTPLSRM*AFLGLP
Trigger: GGGTAAGCCCAAGAAGGCCAACATCCGGGACAATGG...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGTCAGCATGGACTCCATaGGCTCCACAGGCACCACTG +
Preference number: 5 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRSAWTP*APQAPL
Trigger: CAGTGGTGCCTGTGGAGCCAATGGAGTCCATGCTGA...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCATGGTGCCGTCCTTGTaGTCGGTGATGTTGGGCCGT +
Preference number: 5 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTMVPSL*SVMLGR
Trigger: ACGGCCCAACATCACCGACAACAAGGACGGCACCAT...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGATGGTGCCGTCCTaGTTGTCGGTGATGTTGGGC +
Preference number: 5 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRVMVPS*LSVMLG
Trigger: GCCCAACATCACCGACAACAAGGACGGCACCATCAC...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCAAGGTGGCTGGCTTGTaGACCATGCCATGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTKVAGL*TMPWLR
Trigger: CCTGAGCCATGGCATGGTCAACAAGCCAGCCACCTT...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTACATGCTTGCCACTCTaGCGCACGCTCACCACGTGC +
Preference number: 5 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSTCLPL*RTLTTC
Trigger: GCACGTGGTGAGCGTGCGCAAGAGTGGCAAGCATGT...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGGGGATGTGGGCACCGTaGAACTTGACATCGATGGAG +
Preference number: 5 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWGMWAP*NLTSME
Trigger: CTCCATCGATGTCAAGTTCAACGGTGCCCACATCCC...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGCCCACCATCATCATGTaGGTGCCTGCTTTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWPTIIM*VPALLQ
Trigger: CTGCAGCAAAGCAGGCACCAACATGATGATGGTGGG...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGCCCACCATCATCATGTaGGTGCCTGCTTTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: ATRETRPSPRGQEGIWPAPTIIM*VPALLQ
Trigger: CTGCAGCAAAGCAGGCACCAACATGATGATGGTGGG...CGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS TCA 90 bp ATGGGCCGGCGAGAGGGCGAAGTCATCCGCACATCCAGTTGGCCCTaGCCGCCAGCCCCTCGTGTGTTCACAGAGAATGCTTGTTCCTGT +
Preference number: 5 (lower is better)
Translates to: MGRREGEVIRTSSWP*PPAPRVFTENACSC
Trigger: ACAGGAACAAGCATTCTCTGTGAACACACGAGGGGCTGGCGGTCAGGGCCAACTGGATGTGCGGATGACTTCGCCCTCTCGCCGGCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS TCA 90 bp AGGGGGCACGGATGCTGGCGGTCAGCTGGCTCAGATCACTCTCGGTaGTCTTCAGTGACACGTCCGTGGAGGTGCCCACATTCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: RGHGCWRSAGSDHSR*SSVTRPWRCPHSAV
Trigger: CACAGCTGAATGTGGGCACCTCCACGGACGTGTCACTGAAGATCACCGAGAGTGATCTGAGCCAGCTGACCGCCAGCATCCGTGCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS GCA 90 bp ATCTCAAAGTCCCGCACAACCTCGCCCTTGGCTGTCCCTGCAAACTaGACATCCAGCTTGGCCTTGCCGGCTCCCTTGGTCAGCACCGTG +
Preference number: 5 (lower is better)
Translates to: ISKSRTTSPLAVPAN*TSSLALPAPLVSTV
Trigger: CACGGTGCTGACCAAGGGAGCCGGCAAGGCCAAGCTGGATGTGCAGTTTGCAGGGACAGCCAAGGGCGAGGTTGTGCGGGACTTTGAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CCA 90 bp GTGTCTGTCTTGGCCCCCGAGGGGTTGAGCACACGAGCCGTCACGTaGTTGCCGCCTGTGGCTGTTAGGGATCTTGCATCCACAGTGAAC +
Preference number: 5 (lower is better)
Translates to: VSVLAPEGLSTRAVT*LPPVAVRDLASTVN
Trigger: GTTCACTGTGGATGCAAGATCCCTAACAGCCACAGGCGGCAACCACGTGACGGCTCGTGTGCTCAACCCCTCGGGGGCCAAGACAGACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CCA 90 bp CATGGTTCTCAACCACATCCACATCGAGCTCTGCCCCATCCGGCGTaGACACCGTGCATGTCACCTTCCCCTCACCGGCTGCCTTGGCAT +
Preference number: 5 (lower is better)
Translates to: HGSQPHPHRALPHPA*TPCMSPSPHRLPWH
Trigger: ATGCCAAGGCAGCCGGTGAGGGGAAGGTGACATGCACGGTGTCCACGCCGGATGGGGCAGAGCTCGATGTGGATGTGGTTGAGAACCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCTTCATTTGGCGGAAGTaGGGGCGCGGATGGAACTTG +
Preference number: 5 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTFIWRK*GRGWNL
Trigger: CAAGTTCCATCCGCGCCCCAACTTCCGCCAAATGAA...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGGTGCGATCCTTGTCATaGTTGGGAACCACCTTAGCC +
Preference number: 5 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLVRSLS*LGTTLA
Trigger: GGCTAAGGTGGTTCCCAACAATGACAAGGATCGCAC...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTCCGCTGCCGGCACCCTaGGTAAACACCTTGAAGTCA +
Preference number: 5 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSPLPAP*VNTLKS
Trigger: TGACTTCAAGGTGTTTACCAAGGGTGCCGGCAGCGG...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTACAAAATCGGCTGACTaGCCCACCTGGCCAGTCTCC +
Preference number: 5 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSTKSAD*PTWPVS
Trigger: GGAGACTGGCCAGGTGGGCAAGTCAGCCGATTTTGT...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGTGAACTCAGCGGGCTaGTCCACGATGCAGCCGGTA +
Preference number: 5 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLAVNSAG*STMQPV
Trigger: TACCGGCTGCATCGTGGACAAGCCCGCTGAGTTCAC...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTGCGGGGATCTCCTGGTaGGCAAACAGCACCATGATG +
Preference number: 5 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSAGISW*ANSTMM
Trigger: CATCATGGTGCTGTTTGCCAACCAGGAGATCCCCGC...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGGTTCACAGAGAATGCTaGTTCCTGTCCCACAGCCAC +
Preference number: 5 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLVHREC*FLSHSH
Trigger: GTGGCTGTGGGACAGGAACAAGCATTCTCTGTGAAC...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAATCAGCACCTCGGCCTaGACCCCGGCATCCGACAGG +
Preference number: 5 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGISTSA*TPASDR
Trigger: CCTGTCGGATGCCGGGGTCAAGGCCGAGGTGCTGAT...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTCCATTGTCCCGGATGTaGGCCTTCTTGGGCTTACCC +
Preference number: 5 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSPLSRM*AFLGLP
Trigger: GGGTAAGCCCAAGAAGGCCAACATCCGGGACAATGG...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CTGGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTCATCACCGCCATACTaGATGGTGATGGTGTACCGG +
Preference number: 5 (lower is better)
Translates to: LAWVECTSLRPVHVPGHSSSPPY*MVMVYR
Trigger: CCGGTACACCATCACCATCAAGTATGGCGGTGATGA...GGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCTTGTTGTCGGTGATGTaGGGCCGTGCCGTCTTCCCC +
Preference number: 5 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLALLSVM*GRAVFP
Trigger: GGGGAAGACGGCACGGCCCAACATCACCGACAACAA...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGATCTTGAAGGGGCTGTaGGTGACATGCTTGCCACTC +
Preference number: 5 (lower is better)
Translates to: ATRETRPSPRGQEGIWPAILKGL*VTCLPL
Trigger: GAGTGGCAAGCATGTCACCAACAGCCCCTTCAAGAT...CGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCGGGATGTGGGCACCGTaGAACTTGACATCGATGGAG +
Preference number: 5 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTGMWAP*NLTSME
Trigger: CTCCATCGATGTCAAGTTCAACGGTGCCCACATCCC...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GGCTTGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGGTGTGGCACATTaGTGTGTGTGTGTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: GLGGVHIAQAGPCARPLLLGVAH*CVCVCV
Trigger: CACACACACACACACACACAAATGTGCCACACCCAG...CAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGGGCTGTCGGGCGCTGTaGGGGCGCGACCACGGGACT +
Preference number: 5 (lower is better)
Translates to: VWHICVCVCVCVMCVWLEGCRAL*GRDHGT
Trigger: AGTCCCGTGGTCGCGCCCCAACAGCGCCCGACAGCC...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTTGCTTGGGCGTCTGTTaGCGGGCATCCTCATCATCT +
Preference number: 5 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSCLGVC*RASSSS
Trigger: AGATGATGAGGATGCCCGCAAACAGACGCCCAAGCA...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTAAGAGCACGGTCACCTaGTGTAACCCAGCGACCTTG +
Preference number: 5 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSKSTVT*CNPATL
Trigger: CAAGGTCGCTGGGTTACACAAGGTGACCGTGCTCTT...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCGAGGCGCGGCAGGCGTaGGGGTTACAGGCTTCCGAC +
Preference number: 5 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVEARQA*GLQASD
Trigger: GTCGGAAGCCTGTAACCCCAACGCCTGCCGCGCCTC...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGACGCACAACCTCGCCCTaGGCTGTCCCTGCAAACTGC +
Preference number: 5 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGRTTSP*AVPANC
Trigger: GCAGTTTGCAGGGACAGCCAAGGGCGAGGTTGTGCG...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGGTGACCGTTCACAGAGAATGCTaGTTCCTGTCCCACAGCCAC +
Preference number: 5 (lower is better)
Translates to: QVLGVRRVSGRRCSLRVTVHREC*FLSHSH
Trigger: GTGGCTGTGGGACAGGAACAAGCATTCTCTGTGAAC...GGTCACCCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCCATCCGCACATCCAGTaGGCCCTGACCGCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVHPHIQ*ALTASP
Trigger: GGGGCTGGCGGTCAGGGCCAACTGGATGTGCGGATG...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCTTGGCCCCCGAGGGGTaGAGCACACGAGCCGTCACG +
Preference number: 5 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVLAPEG*STRAVT
Trigger: CGTGACGGCTCGTGTGCTCAACCCCTCGGGGGCCAA...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCTCAGCATGGACTCCATaGGCTCCACAGGCACCACTG +
Preference number: 5 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLASAWTP*APQAPL
Trigger: CAGTGGTGCCTGTGGAGCCAATGGAGTCCATGCTGA...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGTGAAGGTGGCTGGCTaGTTGACCATGCCATGGCTC +
Preference number: 5 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLAVKVAG*LTMPWL
Trigger: GAGCCATGGCATGGTCAACAAGCCAGCCACCTTCAC...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TGGGTGGAGTGCACATCGCTCAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGCAGGTGCCATCCTTGTaGTCCTTACAGGTGATCTCT +
Preference number: 5 (lower is better)
Translates to: WVECTSLRPVHVPGHSCWQVPSL*SLQVIS
Trigger: AGAGATCACCTGTAAGGACAACAAGGATGGCACCTG...CCAGCAGGAGTGGCCTGGCACATGGACCGGCCTGAGCGATGTGCACTCCACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGATGCTCCCCGACCTCCTaGGGGGTGAAGGAGATCCCA +
Preference number: 5 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGCSPTS*GVKEIP
Trigger: TGGGATCTCCTTCACCCCCAAGGAGGTCGGGGAGCA...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGTTTGAGGAATGCAATCTCCGCTTaGCTAGGACCCTCCACAGCA +
Preference number: 5 (lower is better)
Translates to: PDQVLGVRRVSGRRCSLRNAISA*LGPSTA
Trigger: TGCTGTGGAGGGTCCTAGCAAAGCGGAGATTGCATT...CCTCAAACTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS TCA 90 bp TCACGTGGTTGCCGCCTGTGGCTGTTAGGGATCTTGCATCCACAGTaGACTCAGTGGTCACCTCCCGCAGGACACCGTGTGGCTCAACAC +
Preference number: 5 (lower is better)
Translates to: SRGCRLWLLGILHPQ*TQWSPPAGHRVAQH
Trigger: GTGTTGAGCCACACGGTGTCCTGCGGGAGGTGACCACTGAGTTCACTGTGGATGCAAGATCCCTAACAGCCACAGGCGGCAACCACGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS GCA 90 bp GTCTATGATCTCAAAGTCCCGCACAACCTCGCCCTTGGCTGTCCCTaGAAACTGCACATCCAGCTTGGCCTTGCCGGCTCCCTTGGTCAG +
Preference number: 5 (lower is better)
Translates to: VYDLKVPHNLALGCP*KLHIQLGLAGSLGQ
Trigger: CTGACCAAGGGAGCCGGCAAGGCCAAGCTGGATGTGCAGTTTGCAGGGACAGCCAAGGGCGAGGTTGTGCGGGACTTTGAGATCATAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS GCA 90 bp TGGTGTACCGGCCACTCATGTCCGGCAGGTAGGACACAGTGTACGTaGCATCCCCATTGTCCCGGATGTTGGCCTTCTTGGGCTTACCCT +
Preference number: 5 (lower is better)
Translates to: WCTGHSCPAGRTQCT*HPHCPGCWPSWAYP
Trigger: AGGGTAAGCCCAAGAAGGCCAACATCCGGGACAATGGGGATGGCACGTACACTGTGTCCTACCTGCCGGACATGAGTGGCCGGTACACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS GCA 90 bp GTCAAAGGTACCGTCATGGTTCTCAACCACATCCACATCGAGCTCTaGCCCATCCGGCGTGGACACCGTGCATGTCACCTTCCCCTCACC +
Preference number: 5 (lower is better)
Translates to: VKGTVMVLNHIHIEL*PIRRGHRACHLPLT
Trigger: GGTGAGGGGAAGGTGACATGCACGGTGTCCACGCCGGATGGGGCAGAGCTCGATGTGGATGTGGTTGAGAACCATGACGGTACCTTTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCCCCTTGACCGTGACCTaGAGCTCCCCGCTGCCGGCA +
Preference number: 5 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSPLTVT*SSPLPA
Trigger: TGCCGGCAGCGGGGAGCTCAAGGTCACGGTCAAGGG...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGACCGTTGGGGATCACCTaGATGTCGATGGGACAGCCG +
Preference number: 5 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGPLGIT*MSMGQP
Trigger: CGGCTGTCCCATCGACATCAAGGTGATCCCCAACGG...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCGATGCTCACGTCGCCTaGCCCCGCCTCGCTGCAGTC +
Preference number: 5 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSDAHVA*PRLAAV
Trigger: GACTGCAGCGAGGCGGGGCAAGGCGACGTGAGCATC...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CAGGCCGGTCCATGTGCCAGGCCACTCCTGCTGGTTCGGGGGCTGTTTTCTTCTTCAGCAAACAGGATGTaGATGGTGTACTCGCCAGGC +
Preference number: 5 (lower is better)
Translates to: QAGPCARPLLLVRGLFSSSANRM*MVYSPG
Trigger: GCCTGGCGAGTACACCATCAACATCCTGTTTGCTGA...AGAAGAAAACAGCCCCCGAACCAGCAGGAGTGGCCTGGCACATGGACCGGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCCCACTGGCCCGCACCTaGCTCGGGTCAAACACAGGC +
Preference number: 5 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVPLART*LGSNTG
Trigger: GCCTGTGTTTGACCCGAGCAAGGTGCGGGCCAGTGG...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp AGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCGGCGGTGCAGCAGGTGCCATCCTTGTaGTCCTTACAGGTGATCTCT +
Preference number: 5 (lower is better)
Translates to: RETRPSPRGQEGIWPAVQQVPSL*SLQVIS
Trigger: AGAGATCACCTGTAAGGACAACAAGGATGGCACCTG...CTGCACCGCCGGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGAGGCAGGGCTCCTCGTaGCCCGAGGGGGCACGGATG +
Preference number: 5 (lower is better)
Translates to: VWHICVCVCVCVMCVWLERQGSS*PEGARM
Trigger: CATCCGTGCCCCCTCGGGCAACGAGGAGCCCTGCCT...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGTCCCCGCCCCGCGTCTaGCTGATCTCCGTGCGCTCC +
Preference number: 5 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWSPPRV*LISVRS
Trigger: GGAGCGCACGGAGATCAGCAAGACGCGGGGCGGGGA...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGACCGCTGCCGGCACCCTaGGTAAACACCTTGAAGTCA +
Preference number: 5 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGPLPAP*VNTLKS
Trigger: TGACTTCAAGGTGTTTACCAAGGGTGCCGGCAGCGG...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCGCCTTGCCGGCTCCCTaGGTCAGCACCGTGAAGTGG +
Preference number: 5 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSALPAP*VSTVKW
Trigger: CCACTTCACGGTGCTGACCAAGGGAGCCGGCAAGGC...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGCATCCGCACATCCAGTaGGCCCTGACCGCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: VWHICVCVCVCVMCVWLEHPHIQ*ALTASP
Trigger: GGGGCTGGCGGTCAGGGCCAACTGGATGTGCGGATG...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCCATGAGCCATCACCATaGTCCTGGCACTCGATCTTG +
Preference number: 5 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLAHEPSP*SWHSIL
Trigger: CAAGATCGAGTGCCAGGACAATGGTGATGGCTCATG...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCATCAGCACCTCGGCCTaGACCCCGGCATCCGACAGG +
Preference number: 5 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSISTSA*TPASDR
Trigger: CCTGTCGGATGCCGGGGTCAAGGCCGAGGTGCTGAT...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCGGGCGCCCGGCCAGCTaGACTGCAATCCACTGTGAA +
Preference number: 5 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVGRPAS*TAIHCE
Trigger: TTCACAGTGGATTGCAGTCAAGCTGGCCGGGCGCCC...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCACTGTGACGAGGCACTaGCTGGCATCCCCAGTGGGC +
Preference number: 5 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVTVTRH*LASPVG
Trigger: GCCCACTGGGGATGCCAGCAAGTGCCTCGTCACAGT...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGACTCCCAGGGATGTGGTaGCCGTCATACTTGATCCCC +
Preference number: 5 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGLPGMW*PSYLIP
Trigger: GGGGATCAAGTATGACGGCAACCACATCCCTGGGAG...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGTGAAGGTGGCTGGCTaGTTGACCATGCCATGGCTC +
Preference number: 5 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGVKVAG*LTMPWL
Trigger: GAGCCATGGCATGGTCAACAAGCCAGCCACCTTCAC...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCTGCGGCTTCCACCTaGCCCGATGGGCTGGTCACC +
Preference number: 5 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSSAAST*PDGLVT
Trigger: GGTGACCAGCCCATCGGGCAAGGTGGAAGCCGCAGA...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAGGGTATCTGGCCCCGCAGGAGCCATCTTaGCGATCCTCAAATGCAATC +
Preference number: 5 (lower is better)
Translates to: CSHQRDQTKSSGSGGYLAPQEPS*RSSNAI
Trigger: GATTGCATTTGAGGATCGCAAAGATGGCTCCTGCGG...GGCCAGATACCCTCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS GCA 90 bp ATCCAGTTGGCCCTGACCGCCAGCCCCTCGTGTGTTCACAGAGAATaGTTGTTCCTGTCCCACAGCCACCTTGCTATTAAGGCCCTGAAC +
Preference number: 5 (lower is better)
Translates to: IQLALTASPSCVHRE*LFLSHSHLAIKALN
Trigger: GTTCAGGGCCTTAATAGCAAGGTGGCTGTGGGACAGGAACAAGCATTCTCTGTGAACACACGAGGGGCTGGCGGTCAGGGCCAACTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS GCA 90 bp GACGACATAGGAGACGCCGCAGGAGCCATCTTTGCGATCCTCAAATaGAATCTCCGCTTTGCTAGGACCCTCCACAGCAATGGACAGGCC +
Preference number: 5 (lower is better)
Translates to: DDIGDAAGAIFAILK*NLRFARTLHSNGQA
Trigger: GGCCTGTCCATTGCTGTGGAGGGTCCTAGCAAAGCGGAGATTGCATTTGAGGATCGCAAAGATGGCTCCTGCGGCGTCTCCTATGTCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCCAAGCAGCCGCTGCTaGGGCGTCTGTTTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWPSSRC*GVCLRA
Trigger: TGCCCGCAAACAGACGCCCAAGCAGCGGCTGCTTGG...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCACAGGGGCACCAGGTTaGAGCTTGGCCTTGGGGAAC +
Preference number: 5 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVTGAPG*SLALGN
Trigger: GTTCCCCAAGGCCAAGCTCAAACCTGGTGCCCCTGT...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGGGCTGCAGCACGGTGTaGCCCTGTGGCTCGATGCCA +
Preference number: 5 (lower is better)
Translates to: VWHICVCVCVCVMCVWLEGCSTV*PCGSMP
Trigger: TGGCATCGAGCCACAGGGCAACACCGTGCTGCAGCC...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCAAGGTGCCGTCGCCGTaGGGGATCACCTTGATGTCG +
Preference number: 5 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVKVPSP*GITLMS
Trigger: CGACATCAAGGTGATCCCCAACGGCGACGGCACCTT...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGGCCTTGCCGGCTCCCTaGGTCAGCACCGTGAAGTGG +
Preference number: 5 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWALPAP*VSTVKW
Trigger: CCACTTCACGGTGCTGACCAAGGGAGCCGGCAAGGC...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCGGCCGAATGGTGGCTTaGAAGGGCGAGCCAGGGATG +
Preference number: 5 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSGRMVA*KGEPGM
Trigger: CATCCCTGGCTCGCCCTTCAAAGCCACCATTCGGCC...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCCACTGGCCCGCACCTaGCTCGGGTCAAACACAGGC +
Preference number: 5 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWPLART*LGSNTG
Trigger: GCCTGTGTTTGACCCGAGCAAGGTGCGGGCCAGTGG...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCCCAGGCCCTGAGACCTaGACGCCACTGGTATCGACC +
Preference number: 5 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSPGPET*TPLVST
Trigger: GGTCGATACCAGTGGCGTCAAGGTCTCAGGGCCTGG...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGCCCTCACCGGCTGCCTaGGCATCCACCGTGATCACC +
Preference number: 5 (lower is better)
Translates to: VWHICVCVCVCVMCVWLEPSPAA*ASTVIT
Trigger: GGTGATCACGGTGGATGCCAAGGCAGCCGGTGAGGG...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCATGGTGATGACGTACTaGCCCGGCTCGGGCGCTGTG +
Preference number: 5 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSMVMTY*PGSGAV
Trigger: CACAGCGCCCGAGCCGGGCAAGTACGTCATCACCAT...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGATGGTTGCCGTCATACTaGATCCCCATCTGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGWLPSY*IPIWCR
Trigger: CCTGCACCAGATGGGGATCAAGTATGACGGCAACCA...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCAGGTGATCTCTGCCTaGGATGGGCCCTCCACGGCC +
Preference number: 5 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWQVISA*DGPSTA
Trigger: GGCCGTGGAGGGCCCATCCAAGGCAGAGATCACCTG...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCCTCCCCGGGATGTGCTaGTCATCGAAGCGCACGATG +
Preference number: 5 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVLPGMC*SSKRTM
Trigger: CATCGTGCGCTTCGATGACAAGCACATCCCGGGGAG...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCGGCCGGCGGTGCAGTTaGAGGGTGACCTCACACACA +
Preference number: 5 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSGRRCS*RVTSHT
Trigger: TGTGTGTGAGGTCACCCTCAAACTGCACCGCCGGCC...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGGTGCCCTTTGGCCCCTaGACCGTGACCTTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWVPFGP*TVTLSS
Trigger: GGAGCTCAAGGTCACGGTCAAGGGGCCAAAGGGCAC...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCCCAGGCCCGGACCTTTaGCACTCCTGCCTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCPGPDL*HSCLWA
Trigger: AGCCCAGAGGCAGGAGTGCAAAAGGTCCGGGCCTGG...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCCCGTTGGGGATCACCTaGATGTCGATGGGACAGCCG +
Preference number: 5 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSPLGIT*MSMGQP
Trigger: CGGCTGTCCCATCGACATCAAGGTGATCCCCAACGG...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGTGGGATGGGTCCACCTaGATGTGGAAGGGGCTGGCG +
Preference number: 5 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWWDGST*MWKGLA
Trigger: CGCCAGCCCCTTCCACATCAAGGTGGACCCATCCCA...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGGGCCGAATGGTGGCTTaGAAGGGCGAGCCAGGGATG +
Preference number: 5 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWGRMVA*KGEPGM
Trigger: CATCCCTGGCTCGCCCTTCAAAGCCACCATTCGGCC...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGGTGCCATCCGCGTTGTaGTGGATCAGCACCTCGGCC +
Preference number: 5 (lower is better)
Translates to: VWHICVCVCVCVMCVWLEVPSAL*WISTSA
Trigger: GGCCGAGGTGCTGATCCACAACAACGCGGATGGCAC...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGCCAGGCCCTGAGACCTaGACGCCACTGGTATCGACC +
Preference number: 5 (lower is better)
Translates to: VWHICVCVCVCVMCVWLEPGPET*TPLVST
Trigger: GGTCGATACCAGTGGCGTCAAGGTCTCAGGGCCTGG...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GCCTTCACTTCACCCCCAAGGCAGGTGTTTGTAGTGTCTGATTCTGTGCGTGTCGTGAATCGGTTGGCCTaGTTGACCAAGCCACCCTCC +
Preference number: 5 (lower is better)
Translates to: AFTSPPRQVFVVSDSVRVVNRLA*LTKPPS
Trigger: GGAGGGTGGCTTGGTCAACAAGGCCAACCGATTCAC...GACACGCACAGAATCAGACACTACAAACACCTGCCTTGGGGGTGAAGTGAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGGGTGCCATCTCCATaGTCCCGCACCTCCACAGGC +
Preference number: 5 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTWVPSP*SRTSTG
Trigger: GCCTGTGGAGGTGCGGGACAATGGAGATGGCACCCA...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCCTCCCCGGGATGTGCTaGTCATCGAAGCGCACGATG +
Preference number: 5 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSLPGMC*SSKRTM
Trigger: CATCGTGCGCTTCGATGACAAGCACATCCCGGGGAG...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGCTCCCCGACCTCCTaGGGGGTGAAGGAGATCCCA +
Preference number: 5 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTCSPTS*GVKEIP
Trigger: TGGGATCTCCTTCACCCCCAAGGAGGTCGGGGAGCA...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCGGCCCCACCAGGATCTaGAAGGGGCTGTTGGTGACA +
Preference number: 5 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSGPTRI*KGLLVT
Trigger: TGTCACCAACAGCCCCTTCAAGATCCTGGTGGGGCC...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCCCTGGGATCTTGAGGTaGAGGTCACAGGTGCTGCCG +
Preference number: 5 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSPGILR*RSQVLP
Trigger: CGGCAGCACCTGTGACCTCAACCTCAAGATCCCAGG...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGTGCTGGCCACGGTACTaGACAGCGACCGTATGGGGC +
Preference number: 5 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWCWPRY*TATVWG
Trigger: GCCCCATACGGTCGCTGTCAAGTACCGTGGCCAGCA...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGAAATGCAATCTCCGCTTaGCTAGGACCCTCCACAGCA +
Preference number: 5 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGNAISA*LGPSTA
Trigger: TGCTGTGGAGGGTCCTAGCAAAGCGGAGATTGCATT...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp AAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCGGGGTCAGGACCGCAGGAGCCATCTTaGCGATCCTCAAATGCAATC +
Preference number: 5 (lower is better)
Translates to: KLWGCSHQRDQTKSSGSGPQEPS*RSSNAI
Trigger: GATTGCATTTGAGGATCGCAAAGATGGCTCCTGCGG...TCCTGACCCCGAGGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCGCTTGCCCACGCACTaGAGGTGCTCATTGCACCAG +
Preference number: 5 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWRLPTH*RCSLHQ
Trigger: CTGGTGCAATGAGCACCTCAAGTGCGTGGGCAAGCG...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCCCATCCACGATGGCCTaGCTGTCTATGGACACGAGC +
Preference number: 5 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSPSTMA*LSMDTS
Trigger: GCTCGTGTCCATAGACAGCAAGGCCATCGTGGATGG...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGAACTGCACATCCAGCTaGGCCTTGCCGGCTCCCTTG +
Preference number: 5 (lower is better)
Translates to: VWHICVCVCVCVMCVWLENCTSS*ALPAPL
Trigger: CAAGGGAGCCGGCAAGGCCAAGCTGGATGTGCAGTT...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACAACTCGGAAGGGGCTCTaGGGCACAGCGACCTCATCA +
Preference number: 5 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTTRKGL*GTATSS
Trigger: TGATGAGGTCGCTGTGCCCAAGAGCCCCTTCCGAGT...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTACGTGCCATCCCCATaGTCCCGGATGTTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSYVPSP*SRMLAF
Trigger: GAAGGCCAACATCCGGGACAATGGGGATGGCACGTA...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGTTGTTGTCGGTGATGTaGGGCCGTGCCGTCTTCCCC +
Preference number: 5 (lower is better)
Translates to: VWHICVCVCVCVMCVWLELLSVM*GRAVFP
Trigger: GGGGAAGACGGCACGGCCCAACATCACCGACAACAA...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGTTGGGGTTCAGCTGCTaGGATCGAACAGGGGCACCA +
Preference number: 5 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWLGFSC*DRTGAP
Trigger: TGGTGCCCCTGTTCGATCCAAGCAGCTGAACCCCAA...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGTTGGGGTTCAGCTGCTaGGATCGAACAGGGGCACCA +
Preference number: 5 (lower is better)
Translates to: VWHICVCVCVCVMCVWLELGFSC*DRTGAP
Trigger: TGGTGCCCCTGTTCGATCCAAGCAGCTGAACCCCAA...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGGTGGGCTCATTGGCCTaGAGGCCTGTCTTCTCCACT +
Preference number: 5 (lower is better)
Translates to: VWHICVCVCVCVMCVWLEVGSLA*RPVFST
Trigger: AGTGGAGAAGACAGGCCTCAAGGCCAATGAGCCCAC...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGAATCGGTTGGCCTTGTaGACCAAGCCACCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: VWHICVCVCVCVMCVWLENRLAL*TKPPSR
Trigger: CCTGGAGGGTGGCTTGGTCAACAAGGCCAACCGATT...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGGTGAATCGGTTGGCCTaGTTGACCAAGCCACCCTCC +
Preference number: 5 (lower is better)
Translates to: VWHICVCVCVCVMCVWLEVNRLA*LTKPPS
Trigger: GGAGGGTGGCTTGGTCAACAAGGCCAACCGATTCAC...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCTCTATGGACACGAGCTaGATGTGCTCGCGCTCGAGG +
Preference number: 5 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCSMDTS*MCSRSR
Trigger: CCTCGAGCGCGAGCACATCAAGCTCGTGTCCATAGA...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCGTGGGCTCATTGGCCTaGAGGCCTGTCTTCTCCACT +
Preference number: 5 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCVGSLA*RPVFST
Trigger: AGTGGAGAAGACAGGCCTCAAGGCCAATGAGCCCAC...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCTCCACAGTGAATCGGTaGGCCTTGTTGACCAAGCCA +
Preference number: 5 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSSTVNR*ALLTKP
Trigger: TGGCTTGGTCAACAAGGCCAACCGATTCACTGTGGA...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCTACGTGCCATCCCCATaGTCCCGGATGTTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCYVPSP*SRMLAF
Trigger: GAAGGCCAACATCCGGGACAATGGGGATGGCACGTA...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACAGTGCGATCCTTGTCATaGTTGGGAACCACCTTAGCC +
Preference number: 5 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTVRSLS*LGTTLA
Trigger: GGCTAAGGTGGTTCCCAACAATGACAAGGATCGCAC...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp CGCACTTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACACATGAGCCATCACCATaGTCCTGGCACTCGATCTTG +
Preference number: 5 (lower is better)
Translates to: RTLFGVFHLSSSQLSCMTHEPSP*SWHSIL
Trigger: CAAGATCGAGTGCCAGGACAATGGTGATGGCTCATG...TGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGTCAGCAAACAGGATGTaGATGGTGTACTCGCCAGGC +
Preference number: 5 (lower is better)
Translates to: VWHICVCVCVCVMCVWLESANRM*MVYSPG
Trigger: GCCTGGCGAGTACACCATCAACATCCTGTTTGCTGA...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GTCTGGGTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGTCCACAGTGAATCGGTaGGCCTTGTTGACCAAGCCA +
Preference number: 5 (lower is better)
Translates to: VWVWHICVCVCVCVMCVWSTVNR*ALLTKP
Trigger: TGGCTTGGTCAACAAGGCCAACCGATTCACTGTGGA...CCACACACACATTACACACACACACACACACACACAAATGTGCCACACCCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TCCAAGTCCTTAAAACTCTGGGGTTGTAGCCACCAGAGAGACCAGACCAAGTCCCCTTCTCCAGCATCTTaGGTGACAATAGTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: SKSLKLWGCSHQRDQTKSPSPAS*VTIVKV
Trigger: CACCTTCACTATTGTCACCAAAGATGCTGGAGAAGG...GGACTTGGTCTGGTCTCTCTGGTGGCTACAACCCCAGAGTTTTAAGGACTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp TTTATTTGGAGTTTTCCACCTAAGCAGCTCCCAGCTGAGCTGCATGACATGTGCATCTTGAAGGGGCTGTaGGTGACATGCTTGCCACTC +
Preference number: 5 (lower is better)
Translates to: FIWSFPPKQLPAELHDMCILKGL*VTCLPL
Trigger: GAGTGGCAAGCATGTCACCAACAGCCCCTTCAAGAT...GCACATGTCATGCAGCTCAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS-3UTR CAA 90 bp GTGTGGCACATTTGTGTGTGTGTGTGTGTGTGTGTAATGTGTGTGTGGCTGGAGCCTTCTCCAGCATCTTaGGTGACAATAGTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: VWHICVCVCVCVMCVWLEPSPAS*VTIVKV
Trigger: CACCTTCACTATTGTCACCAAAGATGCTGGAGAAGG...CTCCAGCCACACACACATTACACACACACACACACACACACAAATGTGCCACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CCA 72 bp AGGCTCGGCGGGCCTCCTAGGCGCTCGGCCGCTCTCTaGCTCTCTCTCCCTCCAGGGCCGGAGCGGTGCTCG +
Preference number: 6 (lower is better)
Translates to: RLGGPPRRSAAL*LSLPPGPERCS
Trigger: CGAGCACCGCTCCGGCCCTGGAGGGAGAGAGAGCCAGAGAGCGGCCGAGCGCCTAGGAGGCCCGCCGAGCCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325888.13
CDS CCA 72 bp CGCTGCTCTCCTCTCCAACTTCTCTCGCGCCGGGGCTaGCGGGGCTCGGCGAGGCTCGGCGGGCCTCCTAGG +
Preference number: 6 (lower is better)
Translates to: RCSPLQLLSRRG*RGSARLGGPPR
Trigger: CCTAGGAGGCCCGCCGAGCCTCGCCGAGCCCCGCCAGCCCCGGCGCGAGAGAAGTTGGAGAGGAGAGCAGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CCA 72 bp CCGCGGTTTGGGCTATCGGGGGCTGTCGGGCGCTGTTaGGGCGCGACCACGGGACTCGCTGCGCTGCGCTGC +
Preference number: 6 (lower is better)
Translates to: PRFGLSGAVGRC*GATTGLAALRC
Trigger: GCAGCGCAGCGCAGCGAGTCCCGTGGTCGCGCCCCAACAGCGCCCGACAGCCCCCGATAGCCCAAACCGCGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CAA 72 bp GCCGCGGTTTGGGCTATCGGGGGCTGTCGGGCGCTGTaGGGGCGCGACCACGGGACTCGCTGCGCTGCGCTG +
Preference number: 6 (lower is better)
Translates to: AAVWAIGGCRAL*GRDHGTRCAAL
Trigger: CAGCGCAGCGCAGCGAGTCCCGTGGTCGCGCCCCAACAGCGCCCGACAGCCCCCGATAGCCCAAACCGCGGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CCA 72 bp GGCCGGCGTCTGAGTAGCCGCTGTTGTTCATCATGCTaGCGCGGGCTGGGGGTGCGGCCGGGGCTAGGGCCG +
Preference number: 6 (lower is better)
Translates to: GRRLSSRCCSSC*RGLGVRPGLGP
Trigger: CGGCCCTAGCCCCGGCCGCACCCCCAGCCCGCGCCAGCATGATGAACAACAGCGGCTACTCAGACGCCGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS TCA 72 bp CAGCCTCTGCAGGGCCCACCACGCCTGGGGCGCACTTaGTGCCGATGCTCACGTCGCCTTGCCCCGCCTCGC +
Preference number: 6 (lower is better)
Translates to: QPLQGPPRLGRT*CRCSRRLAPPR
Trigger: GCGAGGCGGGGCAAGGCGACGTGAGCATCGGCATCAAGTGCGCCCCAGGCGTGGTGGGCCCTGCAGAGGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325888.13
ENST00000346177.6
ENST00000388853.3
CDS GCA 72 bp GGCGCTGTTGGGGCGCGACCACGGGACTCGCTGCGCTaGGCTGCTCTCCTCTCCAACTTCTCTCGCGCCGGG +
Preference number: 6 (lower is better)
Translates to: GAVGARPRDSLR*AALLSNFSRAG
Trigger: CCCGGCGCGAGAGAAGTTGGAGAGGAGAGCAGCGCAGCGCAGCGAGTCCCGTGGTCGCGCCCCAACAGCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS TCA 72 bp GCACCTCGCCCACGCCCGCGTCCACCGTCTGCACGGTaGAGTGGGCAGGCTGCAGCACGGTGTTGCCCTGTG +
Preference number: 6 (lower is better)
Translates to: APRPRPRPPSAR*SGQAAARCCPV
Trigger: CACAGGGCAACACCGTGCTGCAGCCTGCCCACTTCACCGTGCAGACGGTGGACGCGGGCGTGGGCGAGGTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS GCA 72 bp TGTTGGGGCGCGACCACGGGACTCGCTGCGCTGCGCTaGTCTCCTCTCCAACTTCTCTCGCGCCGGGGCTGG +
Preference number: 6 (lower is better)
Translates to: CWGATTGLAALR*SPLQLLSRRGW
Trigger: CCAGCCCCGGCGCGAGAGAAGTTGGAGAGGAGAGCAGCGCAGCGCAGCGAGTCCCGTGGTCGCGCCCCAACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CCA 72 bp TCGCCCACGCCCGCGTCCACCGTCTGCACGGTGAAGTaGGCAGGCTGCAGCACGGTGTTGCCCTGTGGCTCG +
Preference number: 6 (lower is better)
Translates to: SPTPASTVCTVK*AGCSTVLPCGS
Trigger: CGAGCCACAGGGCAACACCGTGCTGCAGCCTGCCCACTTCACCGTGCAGACGGTGGACGCGGGCGTGGGCGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CAA 72 bp GAGCAGTCCACAGTGAAGGTGGCTGCCTCACCGACCTaGCCGCGCTCCAGGCCCGGTCCACTGGCCCGCACC +
Preference number: 6 (lower is better)
Translates to: EQSTVKVAASPT*PRSRPGPLART
Trigger: GGTGCGGGCCAGTGGACCGGGCCTGGAGCGCGGCAAGGTCGGTGAGGCAGCCACCTTCACTGTGGACTGCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS GCA 72 bp TGTCGGGCGCTGTTGGGGCGCGACCACGGGACTCGCTaGGCTGCGCTGCTCTCCTCTCCAACTTCTCTCGCG +
Preference number: 6 (lower is better)
Translates to: CRALLGRDHGTR*AALLSSPTSLA
Trigger: CGCGAGAGAAGTTGGAGAGGAGAGCAGCGCAGCGCAGCGAGTCCCGTGGTCGCGCCCCAACAGCGCCCGACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CCA 72 bp CCTCACCGACCTTGCCGCGCTCCAGGCCCGGTCCACTaGCCCGCACCTTGCTCGGGTCAAACACAGGCCGAA +
Preference number: 6 (lower is better)
Translates to: PHRPCRAPGPVH*PAPCSGQTQAE
Trigger: TTCGGCCTGTGTTTGACCCGAGCAAGGTGCGGGCCAGTGGACCGGGCCTGGAGCGCGGCAAGGTCGGTGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CCA 72 bp CTTCCGCTCCACCGCCTGGCTCCAGCTTGCAGGGGATaGGCCGGCGAGAGGGCGAAGTCATCCGCACATCCA +
Preference number: 6 (lower is better)
Translates to: LPLHRLAPACRG*AGERAKSSAHP
Trigger: TGGATGTGCGGATGACTTCGCCCTCTCGCCGGCCCATCCCCTGCAAGCTGGAGCCAGGCGGTGGAGCGGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CCA 72 bp TCGGTTGGCCTTGTTGACCAAGCCACCCTCCAGGCCTaGCCCGAAGGCTCGGACGCGGGTGGGATCACAGCC +
Preference number: 6 (lower is better)
Translates to: SVGLVDQATLQA*PEGSDAGGITA
Trigger: GGCTGTGATCCCACCCGCGTCCGAGCCTTCGGGCCAGGCCTGGAGGGTGGCTTGGTCAACAAGGCCAACCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CCA 72 bp GCCCCGGGCACCGTTCAGCTGCACGGCAAAGGACGCTaGCTGGTTCACCTTGAGCCCCGTCTCCTGGAGGCT +
Preference number: 6 (lower is better)
Translates to: APGTVQLHGKGR*LVHLEPRLLEA
Trigger: AGCCTCCAGGAGACGGGGCTCAAGGTGAACCAGCCAGCGTCCTTTGCCGTGCAGCTGAACGGTGCCCGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CAA 90 bp CCCTCCATGGCAGGTCTGTATGTGCAGCGGAACGTGCTGTCACCCTaGTCCTCCAGGGCCACCTCCACTGTGTCCCGCCGGCCCTGTGGG +
Preference number: 6 (lower is better)
Translates to: PSMAGLYVQRNVLSP*SSRATSTVSRRPCG
Trigger: CCCACAGGGCCGGCGGGACACAGTGGAGGTGGCCCTGGAGGACAAGGGTGACAGCACGTTCCGCTGCACATACAGACCTGCCATGGAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CAA 90 bp TCACCGACCTTGCCGCGCTCCAGGCCCGGTCCACTGGCCCGCACCTaGCTCGGGTCAAACACAGGCCGAATGGTGGCTTTGAAGGGCGAG +
Preference number: 6 (lower is better)
Translates to: SPTLPRSRPGPLART*LGSNTGRMVALKGE
Trigger: CTCGCCCTTCAAAGCCACCATTCGGCCTGTGTTTGACCCGAGCAAGGTGCGGGCCAGTGGACCGGGCCTGGAGCGCGGCAAGGTCGGTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS TCA 72 bp CTCGTCTGTCTCATCGCCCAGGCCGAGGCCGGCGTCTaGGTAGCCGCTGTTGTTCATCATGCTGGCGCGGGC +
Preference number: 6 (lower is better)
Translates to: LVCLIAQAEAGV*VAAVVHHAGAG
Trigger: GCCCGCGCCAGCATGATGAACAACAGCGGCTACTCAGACGCCGGCCTCGGCCTGGGCGATGAGACAGACGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS TCA 72 bp TCAGCTCCGCCTCGCCTGCCTCTGAGCAGTCCACAGTaGAGGTGGCTGCCTCACCGACCTTGCCGCGCTCCA +
Preference number: 6 (lower is better)
Translates to: SAPPRLPLSSPQ*RWLPHRPCRAP
Trigger: TGGAGCGCGGCAAGGTCGGTGAGGCAGCCACCTTCACTGTGGACTGCTCAGAGGCAGGCGAGGCGGAGCTGA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS TCA 72 bp TGCGCTCCGTGCGGGTGTAGGTGTGGCTGCTGCGTGTaGAGGTGCGTGTCAGGCGCTCCTGGGCAGACACCA +
Preference number: 6 (lower is better)
Translates to: CAPCGCRCGCCV*RCVSGAPGQTP
Trigger: TGGTGTCTGCCCAGGAGCGCCTGACACGCACCTTCACACGCAGCAGCCACACCTACACCCGCACGGAGCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CCA 72 bp CGGGCACCGTTCAGCTGCACGGCAAAGGACGCTGGCTaGTTCACCTTGAGCCCCGTCTCCTGGAGGCTGGTG +
Preference number: 6 (lower is better)
Translates to: RAPFSCTAKDAG*FTLSPVSWRLV
Trigger: CACCAGCCTCCAGGAGACGGGGCTCAAGGTGAACCAGCCAGCGTCCTTTGCCGTGCAGCTGAACGGTGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CAA 72 bp GAGCAGCGGAAGGTGCCGTCGCCGTTGGGGATCACCTaGATGTCGATGGGACAGCCGTCGGCGTCCTGGGCA +
Preference number: 6 (lower is better)
Translates to: EQRKVPSPLGIT*MSMGQPSASWA
Trigger: TGCCCAGGACGCCGACGGCTGTCCCATCGACATCAAGGTGATCCCCAACGGCGACGGCACCTTCCGCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325888.13
ENST00000346177.6
ENST00000388853.3
CDS CAA 72 bp GGGCCGGCGAGAGGGCGAAGTCATCCGCACATCCAGTaGGCCCTGACCGCCAGCCCCTCGTGTGTTCACAGA +
Preference number: 6 (lower is better)
Translates to: GPARGRSHPHIQ*ALTASPSCVHR
Trigger: TCTGTGAACACACGAGGGGCTGGCGGTCAGGGCCAACTGGATGTGCGGATGACTTCGCCCTCTCGCCGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CAA 72 bp TTGCCGCGCTCCAGGCCCGGTCCACTGGCCCGCACCTaGCTCGGGTCAAACACAGGCCGAATGGTGGCTTTG +
Preference number: 6 (lower is better)
Translates to: LPRSRPGPLART*LGSNTGRMVAL
Trigger: CAAAGCCACCATTCGGCCTGTGTTTGACCCGAGCAAGGTGCGGGCCAGTGGACCGGGCCTGGAGCGCGGCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS TCA 72 bp CAAAGGGGCTGCGAGGGATGGCGTAGCCGCCCCACGTaGTGGTCACCACATACTTCCCAGGCACCACCGGGT +
Preference number: 6 (lower is better)
Translates to: QRGCEGWRSRPT*WSPHTSQAPPG
Trigger: ACCCGGTGGTGCCTGGGAAGTATGTGGTGACCATCACGTGGGGCGGCTACGCCATCCCTCGCAGCCCCTTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS TCA 72 bp AGCAGCGGAAGGTGCCGTCGCCGTTGGGGATCACCTTaGTGTCGATGGGACAGCCGTCGGCGTCCTGGGCAT +
Preference number: 6 (lower is better)
Translates to: SSGRCRRRWGSP*CRWDSRRRPGH
Trigger: ATGCCCAGGACGCCGACGGCTGTCCCATCGACATCAAGGTGATCCCCAACGGCGACGGCACCTTCCGCTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325888.13
ENST00000346177.6
ENST00000388853.3
CDS TCA 72 bp GGCTGGCGGGGATCTCCTGGTTGGCAAACAGCACCATaGTGGTGTAGCGGCCCGCCCCTGGTGGCGTGTACT +
Preference number: 6 (lower is better)
Translates to: GWRGSPGWQTAP*WCSGPPLVACT
Trigger: AGTACACGCCACCAGGGGCGGGCCGCTACACCATCATGGTGCTGTTTGCCAACCAGGAGATCCCCGCCAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS GCA 72 bp CCACATCGAGCTCTGCCCCATCCGGCGTGGACACCGTaGATGTCACCTTCCCCTCACCGGCTGCCTTGGCAT +
Preference number: 6 (lower is better)
Translates to: PHRALPHPAWTP*MSPSPHRLPWH
Trigger: ATGCCAAGGCAGCCGGTGAGGGGAAGGTGACATGCACGGTGTCCACGCCGGATGGGGCAGAGCTCGATGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS GCA 72 bp CTGCCACCTGGAATGTGTGTCCCTCGGAAAGCCCCTTaGCCCAGACCCGCACCTTGCTGGCGTCCCCGATCT +
Preference number: 6 (lower is better)
Translates to: LPPGMCVPRKAP*PRPAPCWRPRS
Trigger: AGATCGGGGACGCCAGCAAGGTGCGGGTCTGGGGCAAGGGGCTTTCCGAGGGACACACATTCCAGGTGGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CAA 72 bp GCAGGTCTGTATGTGCAGCGGAACGTGCTGTCACCCTaGTCCTCCAGGGCCACCTCCACTGTGTCCCGCCGG +
Preference number: 6 (lower is better)
Translates to: AGLYVQRNVLSP*SSRATSTVSRR
Trigger: CCGGCGGGACACAGTGGAGGTGGCCCTGGAGGACAAGGGTGACAGCACGTTCCGCTGCACATACAGACCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CAA 72 bp CTCTTGCGCACGCTCACCACGTGCTCCCCGACCTCCTaGGGGGTGAAGGAGATCCCAATGTGCCGGTTGGGC +
Preference number: 6 (lower is better)
Translates to: LLRTLTTCSPTS*GVKEIPMCRLG
Trigger: GCCCAACCGGCACATTGGGATCTCCTTCACCCCCAAGGAGGTCGGGGAGCACGTGGTGAGCGTGCGCAAGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CAA 90 bp GCAGGGGATGGGCCGGCGAGAGGGCGAAGTCATCCGCACATCCAGTaGGCCCTGACCGCCAGCCCCTCGTGTGTTCACAGAGAATGCTTG +
Preference number: 6 (lower is better)
Translates to: AGDGPARGRSHPHIQ*ALTASPSCVHRECL
Trigger: CAAGCATTCTCTGTGAACACACGAGGGGCTGGCGGTCAGGGCCAACTGGATGTGCGGATGACTTCGCCCTCTCGCCGGCCCATCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CAA 90 bp ACCTCCCGCAGGACACCGTGTGGCTCAACACCAGGCCCTGAGACCTaGACGCCACTGGTATCGACCGCAGGCTGCACATGGACACGGGTG +
Preference number: 6 (lower is better)
Translates to: TSRRTPCGSTPGPET*TPLVSTAGCTWTRV
Trigger: CACCCGTGTCCATGTGCAGCCTGCGGTCGATACCAGTGGCGTCAAGGTCTCAGGGCCTGGTGTTGAGCCACACGGTGTCCTGCGGGAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS TCA 72 bp CTGTCACATAGGTGTCTGTCTTGGCCCCCGAGGGGTTaGGCACACGAGCCGTCACGTGGTTGCCGCCTGTGG +
Preference number: 6 (lower is better)
Translates to: LSHRCLSWPPRG*AHEPSRGCRLW
Trigger: CCACAGGCGGCAACCACGTGACGGCTCGTGTGCTCAACCCCTCGGGGGCCAAGACAGACACCTATGTGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS GCA 72 bp GGACTGCGGGTGATGGGGGCACCCGCAAAGGCCACATaGACGGTATGTGGCCCCTCCATGGCAGGTCTGTAT +
Preference number: 6 (lower is better)
Translates to: GLRVMGAPAKAT*TVCGPSMAGLY
Trigger: ATACAGACCTGCCATGGAGGGGCCACATACCGTGCATGTGGCCTTTGCGGGTGCCCCCATCACCCGCAGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CCA 72 bp CTCGAACACACCATCCCCAGCCTCCCGCACCTTCACTaGCTCCTCTGTGCCCTTTGGCCCCTTGACCGTGAC +
Preference number: 6 (lower is better)
Translates to: LEHTIPSLPHLH*LLCALWPLDRD
Trigger: GTCACGGTCAAGGGGCCAAAGGGCACAGAGGAGCCAGTGAAGGTGCGGGAGGCTGGGGATGGTGTGTTCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CCA 72 bp ACCTTGACGCCACTGGTATCGACCGCAGGCTGCACATaGACACGGGTGGGGAATTTGGGCACGGGATGCCCG +
Preference number: 6 (lower is better)
Translates to: TLTPLVSTAGCT*TRVGNLGTGCP
Trigger: CGGGCATCCCGTGCCCAAATTCCCCACCCGTGTCCATGTGCAGCCTGCGGTCGATACCAGTGGCGTCAAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CCA 72 bp TTGGCCCCCGAGGGGTTGAGCACACGAGCCGTCACGTaGTTGCCGCCTGTGGCTGTTAGGGATCTTGCATCC +
Preference number: 6 (lower is better)
Translates to: LAPEGLSTRAVT*LPPVAVRDLAS
Trigger: GGATGCAAGATCCCTAACAGCCACAGGCGGCAACCACGTGACGGCTCGTGTGCTCAACCCCTCGGGGGCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CCA 72 bp CAACCACATCCACATCGAGCTCTGCCCCATCCGGCGTaGACACCGTGCATGTCACCTTCCCCTCACCGGCTG +
Preference number: 6 (lower is better)
Translates to: QPHPHRALPHPA*TPCMSPSPHRL
Trigger: CAGCCGGTGAGGGGAAGGTGACATGCACGGTGTCCACGCCGGATGGGGCAGAGCTCGATGTGGATGTGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CAA 72 bp CCAGCTGCACGAGCATCAATGGTGAACTCAGCGGGCTaGTCCACGATGCAGCCGGTAGGCTCCAGGCCAGGC +
Preference number: 6 (lower is better)
Translates to: PAARASMVNSAG*STMQPVGSRPG
Trigger: GCCTGGCCTGGAGCCTACCGGCTGCATCGTGGACAAGCCCGCTGAGTTCACCATTGATGCTCGTGCAGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325888.13
ENST00000346177.6
ENST00000388853.3
CDS CAA 72 bp GCCCCCGAGGGGTTGAGCACACGAGCCGTCACGTGGTaGCCGCCTGTGGCTGTTAGGGATCTTGCATCCACA +
Preference number: 6 (lower is better)
Translates to: APEGLSTRAVTW*PPVAVRDLAST
Trigger: TGTGGATGCAAGATCCCTAACAGCCACAGGCGGCAACCACGTGACGGCTCGTGTGCTCAACCCCTCGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CAA 90 bp GCCACATTGCCCACAGGTTCCAGGCCAGGGCCACGGGCTGACACCTaGTTGGCATCTCCCAGGGCCATGCCCACGTTCACCTCAAAGGGA +
Preference number: 6 (lower is better)
Translates to: ATLPTGSRPGPRADT*LASPRAMPTFTSKG
Trigger: TCCCTTTGAGGTGAACGTGGGCATGGCCCTGGGAGATGCCAACAAGGTGTCAGCCCGTGGCCCTGGCCTGGAACCTGTGGGCAATGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CAA 90 bp TCTCCCTTGCCAGCTGCACGAGCATCAATGGTGAACTCAGCGGGCTaGTCCACGATGCAGCCGGTAGGCTCCAGGCCAGGCCCAAAGGCC +
Preference number: 6 (lower is better)
Translates to: SPLPAARASMVNSAG*STMQPVGSRPGPKA
Trigger: GGCCTTTGGGCCTGGCCTGGAGCCTACCGGCTGCATCGTGGACAAGCCCGCTGAGTTCACCATTGATGCTCGTGCAGCTGGCAAGGGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325888.13
ENST00000346177.6
ENST00000388853.3
CDS CAA 90 bp ACATTGCCCACAGGTTCCAGGCCAGGGCCACGGGCTGACACCTTGTaGGCATCTCCCAGGGCCATGCCCACGTTCACCTCAAAGGGACTG +
Preference number: 6 (lower is better)
Translates to: TLPTGSRPGPRADTL*ASPRAMPTFTSKGL
Trigger: CAGTCCCTTTGAGGTGAACGTGGGCATGGCCCTGGGAGATGCCAACAAGGTGTCAGCCCGTGGCCCTGGCCTGGAACCTGTGGGCAATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS TCA 72 bp TGGAGAATGGCGCGGGGGTGCCTACCAGTCCACCCTTaGGACCCGGGCCATAAGCACAGACCTTGGAGGGAT +
Preference number: 6 (lower is better)
Translates to: WRMARGCLPVHP*DPGHKHRPWRD
Trigger: ATCCCTCCAAGGTCTGTGCTTATGGCCCGGGTCTCAAGGGTGGACTGGTAGGCACCCCCGCGCCATTCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS TCA 72 bp GGACACCGTGTGGCTCAACACCAGGCCCTGAGACCTTaGCGCCACTGGTATCGACCGCAGGCTGCACATGGA +
Preference number: 6 (lower is better)
Translates to: GHRVAQHQALRP*RHWYRPQAAHG
Trigger: TCCATGTGCAGCCTGCGGTCGATACCAGTGGCGTCAAGGTCTCAGGGCCTGGTGTTGAGCCACACGGTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS GCA 72 bp CTCAAAGTCCCGCACAACCTCGCCCTTGGCTGTCCCTaGAAACTGCACATCCAGCTTGGCCTTGCCGGCTCC +
Preference number: 6 (lower is better)
Translates to: LKVPHNLALGCP*KLHIQLGLAGS
Trigger: GGAGCCGGCAAGGCCAAGCTGGATGTGCAGTTTGCAGGGACAGCCAAGGGCGAGGTTGTGCGGGACTTTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS GCA 72 bp CCTGAGACCTTGACGCCACTGGTATCGACCGCAGGCTaGACATGGACACGGGTGGGGAATTTGGGCACGGGA +
Preference number: 6 (lower is better)
Translates to: PETLTPLVSTAG*TWTRVGNLGTG
Trigger: TCCCGTGCCCAAATTCCCCACCCGTGTCCATGTGCAGCCTGCGGTCGATACCAGTGGCGTCAAGGTCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS GCA 72 bp GTGACATGCTTGCCACTCTTGCGCACGCTCACCACGTaGTCCCCGACCTCCTTGGGGGTGAAGGAGATCCCA +
Preference number: 6 (lower is better)
Translates to: VTCLPLLRTLTT*SPTSLGVKEIP
Trigger: TGGGATCTCCTTCACCCCCAAGGAGGTCGGGGAGCACGTGGTGAGCGTGCGCAAGAGTGGCAAGCATGTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CCA 72 bp GATGGGGGCACCCGCAAAGGCCACATGCACGGTATGTaGCCCCTCCATGGCAGGTCTGTATGTGCAGCGGAA +
Preference number: 6 (lower is better)
Translates to: DGGTRKGHMHGM*PLHGRSVCAAE
Trigger: TTCCGCTGCACATACAGACCTGCCATGGAGGGGCCACATACCGTGCATGTGGCCTTTGCGGGTGCCCCCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CCA 72 bp TCGTTGCCCGAGGGGGCACGGATGCTGGCGGTCAGCTaGCTCAGATCACTCTCGGTGATCTTCAGTGACACG +
Preference number: 6 (lower is better)
Translates to: SLPEGARMLAVS*LRSLSVIFSDT
Trigger: CGTGTCACTGAAGATCACCGAGAGTGATCTGAGCCAGCTGACCGCCAGCATCCGTGCCCCCTCGGGCAACGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CAA 72 bp TCGCCCTTGGCTGTCCCTGCAAACTGCACATCCAGCTaGGCCTTGCCGGCTCCCTTGGTCAGCACCGTGAAG +
Preference number: 6 (lower is better)
Translates to: SPLAVPANCTSS*ALPAPLVSTVK
Trigger: CTTCACGGTGCTGACCAAGGGAGCCGGCAAGGCCAAGCTGGATGTGCAGTTTGCAGGGACAGCCAAGGGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CAA 72 bp AGGACACCGTGTGGCTCAACACCAGGCCCTGAGACCTaGACGCCACTGGTATCGACCGCAGGCTGCACATGG +
Preference number: 6 (lower is better)
Translates to: RTPCGSTPGPET*TPLVSTAGCTW
Trigger: CCATGTGCAGCCTGCGGTCGATACCAGTGGCGTCAAGGTCTCAGGGCCTGGTGTTGAGCCACACGGTGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS TCA 72 bp CGAGAGGGCGAAGTCATCCGCACATCCAGTTGGCCCTaGCCGCCAGCCCCTCGTGTGTTCACAGAGAATGCT +
Preference number: 6 (lower is better)
Translates to: REGEVIRTSSWP*PPAPRVFTENA
Trigger: AGCATTCTCTGTGAACACACGAGGGGCTGGCGGTCAGGGCCAACTGGATGTGCGGATGACTTCGCCCTCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS GCA 72 bp GGTGAGTCTCGGATGTCCTCATCGTCACAGATGACGTaGACAGCGTACTCCCCAGGCTCCGTGGGCCAGTAC +
Preference number: 6 (lower is better)
Translates to: GESRMSSSSQMT*TAYSPGSVGQY
Trigger: GTACTGGCCCACGGAGCCTGGGGAGTACGCTGTGCACGTCATCTGTGACGATGAGGACATCCGAGACTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CCA 72 bp GTGGCTCGATGCCAGGCCCATAGGCGATGGCTTTCTTaGGGTTCAGCTGCTTGGATCGAACAGGGGCACCAG +
Preference number: 6 (lower is better)
Translates to: VARCQAHRRWLS*GSAAWIEQGHQ
Trigger: CTGGTGCCCCTGTTCGATCCAAGCAGCTGAACCCCAAGAAAGCCATCGCCTATGGGCCTGGCATCGAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CCA 72 bp CCGCAAAGGCCACATGCACGGTATGTGGCCCCTCCATaGCAGGTCTGTATGTGCAGCGGAACGTGCTGTCAC +
Preference number: 6 (lower is better)
Translates to: PQRPHARYVAPP*QVCMCSGTCCH
Trigger: GTGACAGCACGTTCCGCTGCACATACAGACCTGCCATGGAGGGGCCACATACCGTGCATGTGGCCTTTGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CCA 72 bp GATGACCAGGTTGAAGGGCCTCAGCATGGACTCCATTaGCTCCACAGGCACCACTGGCTCCTCTGTGGCCCA +
Preference number: 6 (lower is better)
Translates to: DDQVEGPQHGLH*LHRHHWLLCGP
Trigger: TGGGCCACAGAGGAGCCAGTGGTGCCTGTGGAGCCAATGGAGTCCATGCTGAGGCCCTTCAACCTGGTCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325888.13
CDS CCA 72 bp TGGCTGCTGCGTGTGAAGGTGCGTGTCAGGCGCTCCTaGGCAGACACCATCTGGAACCAGTTTCCTGGGATC +
Preference number: 6 (lower is better)
Translates to: WLLRVKVRVRRS*ADTIWNQFPGI
Trigger: GATCCCAGGAAACTGGTTCCAGATGGTGTCTGCCCAGGAGCGCCTGACACGCACCTTCACACGCAGCAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CCA 72 bp GATGACCAGGTTGAAGGGCCTCAGCATGGACTCCATTaGCTCCACAGGCACCACTGGCTCCTCTGTGGCCAG +
Preference number: 6 (lower is better)
Translates to: DDQVEGPQHGLH*LHRHHWLLCGQ
Trigger: CTGGCCACAGAGGAGCCAGTGGTGCCTGTGGAGCCAATGGAGTCCATGCTGAGGCCCTTCAACCTGGTCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346177.6
CDS CAA 90 bp TCTGTCTTGGCCCCCGAGGGGTTGAGCACACGAGCCGTCACGTGGTaGCCGCCTGTGGCTGTTAGGGATCTTGCATCCACAGTGAACTCA +
Preference number: 6 (lower is better)
Translates to: SVLAPEGLSTRAVTW*PPVAVRDLASTVNS
Trigger: TGAGTTCACTGTGGATGCAAGATCCCTAACAGCCACAGGCGGCAACCACGTGACGGCTCGTGTGCTCAACCCCTCGGGGGCCAAGACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS TCA 72 bp GGAAGCAGTCAGGTGGGGCGGGCAGGATGTGGGCAATaGAGGGTGAGTCTCGGATGTCCTCATCGTCACAGA +
Preference number: 6 (lower is better)
Translates to: GSSQVGRAGCGQ*RVSLGCPHRHR
Trigger: TCTGTGACGATGAGGACATCCGAGACTCACCCTTCATTGCCCACATCCTGCCCGCCCCACCTGACTGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS TCA 72 bp TGCCGCCTGTGGCTGTTAGGGATCTTGCATCCACAGTaGACTCAGTGGTCACCTCCCGCAGGACACCGTGTG +
Preference number: 6 (lower is better)
Translates to: CRLWLLGILHPQ*TQWSPPAGHRV
Trigger: CACACGGTGTCCTGCGGGAGGTGACCACTGAGTTCACTGTGGATGCAAGATCCCTAACAGCCACAGGCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS TCA 72 bp GGATGCTGGCGGTCAGCTGGCTCAGATCACTCTCGGTaGTCTTCAGTGACACGTCCGTGGAGGTGCCCACAT +
Preference number: 6 (lower is better)
Translates to: GCWRSAGSDHSR*SSVTRPWRCPH
Trigger: ATGTGGGCACCTCCACGGACGTGTCACTGAAGATCACCGAGAGTGATCTGAGCCAGCTGACCGCCAGCATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS GCA 72 bp CGCCCTCCTCGTAGGCGGTGTACTGCACTCGGTAGGTaGCGTCCCCATTGTCTGTCACATAGGTGTCTGTCT +
Preference number: 6 (lower is better)
Translates to: RPPRRRCTALGR*RPHCLSHRCLS
Trigger: AGACAGACACCTATGTGACAGACAATGGGGACGGCACCTACCGAGTGCAGTACACCGCCTACGAGGAGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS GCA 72 bp GGCCACTCATGTCCGGCAGGTAGGACACAGTGTACGTaGCATCCCCATTGTCCCGGATGTTGGCCTTCTTGG +
Preference number: 6 (lower is better)
Translates to: GHSCPAGRTQCT*HPHCPGCWPSW
Trigger: CCAAGAAGGCCAACATCCGGGACAATGGGGATGGCACGTACACTGTGTCCTACCTGCCGGACATGAGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CCA 72 bp CCTGCATTGCGAGTGTCCACGATGAACTCTGCCACCTaGAATGTGTGTCCCTCGGAAAGCCCCTTGCCCCAG +
Preference number: 6 (lower is better)
Translates to: PALRVSTMNSAT*NVCPSESPLPQ
Trigger: CTGGGGCAAGGGGCTTTCCGAGGGACACACATTCCAGGTGGCAGAGTTCATCGTGGACACTCGCAATGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS GCA 72 bp ACCGTCATGGTTCTCAACCACATCCACATCGAGCTCTaGCCCATCCGGCGTGGACACCGTGCATGTCACCTT +
Preference number: 6 (lower is better)
Translates to: TVMVLNHIHIEL*PIRRGHRACHL
Trigger: AAGGTGACATGCACGGTGTCCACGCCGGATGGGGCAGAGCTCGATGTGGATGTGGTTGAGAACCATGACGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CCA 72 bp TGTTGCCCTGTGGCTCGATGCCAGGCCCATAGGCGATaGCTTTCTTGGGGTTCAGCTGCTTGGATCGAACAG +
Preference number: 6 (lower is better)
Translates to: CCPVARCQAHRR*LSWGSAAWIEQ
Trigger: CTGTTCGATCCAAGCAGCTGAACCCCAAGAAAGCCATCGCCTATGGGCCTGGCATCGAGCCACAGGGCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CAA 72 bp TACGTGCCATCCCCATTGTCCCGGATGTTGGCCTTCTaGGGCTTACCCTCGGGGTCCAAGATCTGGACAGTG +
Preference number: 6 (lower is better)
Translates to: YVPSPLSRMLAF*GLPSGSKIWTV
Trigger: CACTGTCCAGATCTTGGACCCCGAGGGTAAGCCCAAGAAGGCCAACATCCGGGACAATGGGGATGGCACGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CAA 72 bp ATCTCAGATGGCCCCACCAGGATCTTGAAGGGGCTGTaGGTGACATGCTTGCCACTCTTGCGCACGCTCACC +
Preference number: 6 (lower is better)
Translates to: ISDGPTRILKGL*VTCLPLLRTLT
Trigger: GGTGAGCGTGCGCAAGAGTGGCAAGCATGTCACCAACAGCCCCTTCAAGATCCTGGTGGGGCCATCTGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS GCA 72 bp GCCCTGACCGCCAGCCCCTCGTGTGTTCACAGAGAATaGTTGTTCCTGTCCCACAGCCACCTTGCTATTAAG +
Preference number: 6 (lower is better)
Translates to: ALTASPSCVHRE*LFLSHSHLAIK
Trigger: CTTAATAGCAAGGTGGCTGTGGGACAGGAACAAGCATTCTCTGTGAACACACGAGGGGCTGGCGGTCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CCA 72 bp AAGGTGCGTGTCAGGCGCTCCTGGGCAGACACCATCTaGAACCAGTTTCCTGGGATCTTGAGGTTGAGGTCA +
Preference number: 6 (lower is better)
Translates to: KVRVRRSWADTI*NQFPGILRLRS
Trigger: TGACCTCAACCTCAAGATCCCAGGAAACTGGTTCCAGATGGTGTCTGCCCAGGAGCGCCTGACACGCACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CAA 72 bp CTGACCGCCAGCCCCTCGTGTGTTCACAGAGAATGCTaGTTCCTGTCCCACAGCCACCTTGCTATTAAGGCC +
Preference number: 6 (lower is better)
Translates to: LTASPSCVHREC*FLSHSHLAIKA
Trigger: GGCCTTAATAGCAAGGTGGCTGTGGGACAGGAACAAGCATTCTCTGTGAACACACGAGGGGCTGGCGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CAA 90 bp CAGTTGGCCCTGACCGCCAGCCCCTCGTGTGTTCACAGAGAATGCTaGTTCCTGTCCCACAGCCACCTTGCTATTAAGGCCCTGAACTTT +
Preference number: 6 (lower is better)
Translates to: QLALTASPSCVHREC*FLSHSHLAIKALNF
Trigger: AAAGTTCAGGGCCTTAATAGCAAGGTGGCTGTGGGACAGGAACAAGCATTCTCTGTGAACACACGAGGGGCTGGCGGTCAGGGCCAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS TCA 72 bp TGTTCCTGTCCCACAGCCACCTTGCTATTAAGGCCCTaGACTTTGATTTTGCTGAGGTCCAGCGGGGGTGCC +
Preference number: 6 (lower is better)
Translates to: CSCPTATLLLRP*TLILLRSSGGA
Trigger: GGCACCCCCGCTGGACCTCAGCAAAATCAAAGTTCAGGGCCTTAATAGCAAGGTGGCTGTGGGACAGGAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS TCA 72 bp CCAAGCCCCCATAACCTGCATTGCGAGTGTCCACGATaGACTCTGCCACCTGGAATGTGTGTCCCTCGGAAA +
Preference number: 6 (lower is better)
Translates to: PSPHNLHCECPR*TLPPGMCVPRK
Trigger: TTTCCGAGGGACACACATTCCAGGTGGCAGAGTTCATCGTGGACACTCGCAATGCAGGTTATGGGGGCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS GCA 72 bp CCCATAACCTGCATTGCGAGTGTCCACGATGAACTCTaGCACCTGGAATGTGTGTCCCTCGGAAAGCCCCTT +
Preference number: 6 (lower is better)
Translates to: PITCIASVHDEL*HLECVSLGKPL
Trigger: AAGGGGCTTTCCGAGGGACACACATTCCAGGTGGCAGAGTTCATCGTGGACACTCGCAATGCAGGTTATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS GCA 72 bp GGAGACGCCGCAGGAGCCATCTTTGCGATCCTCAAATaGAATCTCCGCTTTGCTAGGACCCTCCACAGCAAT +
Preference number: 6 (lower is better)
Translates to: GDAAGAIFAILK*NLRFARTLHSN
Trigger: ATTGCTGTGGAGGGTCCTAGCAAAGCGGAGATTGCATTTGAGGATCGCAAAGATGGCTCCTGCGGCGTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CAA 72 bp TTGTCTATGATCTCAAAGTCCCGCACAACCTCGCCCTaGGCTGTCCCTGCAAACTGCACATCCAGCTTGGCC +
Preference number: 6 (lower is better)
Translates to: LSMISKSRTTSP*AVPANCTSSLA
Trigger: GGCCAAGCTGGATGTGCAGTTTGCAGGGACAGCCAAGGGCGAGGTTGTGCGGGACTTTGAGATCATAGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CAA 72 bp GAGCCATCTTTGCGATCCTCAAATGCAATCTCCGCTTaGCTAGGACCCTCCACAGCAATGGACAGGCCCCCA +
Preference number: 6 (lower is better)
Translates to: EPSLRSSNAISA*LGPSTAMDRPP
Trigger: TGGGGGCCTGTCCATTGCTGTGGAGGGTCCTAGCAAAGCGGAGATTGCATTTGAGGATCGCAAAGATGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6
CDS CCA 72 bp CAAAGAGCACGGTCACCTTGTGTAACCCAGCGACCTTaGGCACATAGGAGACAGCATAGGTGCGATCCTTGT +
Preference number: 6 (lower is better)
Translates to: QRARSPCVTQRP*AHRRQHRCDPC
Trigger: ACAAGGATCGCACCTATGCTGTCTCCTATGTGCCCAAGGTCGCTGGGTTACACAAGGTGACCGTGCTCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325888.13
ENST00000346177.6