RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FLNB (Homo sapiens)

Ensembl gene IDs: ENSG00000136068

Ensembl transcript IDs: ENST00000295956.9, ENST00000358537.7, ENST00000419752.3, ENST00000419752.4, ENST00000429972.6, ENST00000466455.1, ENST00000468939.1, ENST00000470231.1, ENST00000475487.1, ENST00000477629.1, ENST00000481470.5, ENST00000484981.1, ENST00000490882.5, ENST00000491408.1, ENST00000493452.5, ENST00000682097.1, ENST00000682297.1, ENST00000682503.1, ENST00000682868.1, ENST00000682871.1, ENST00000682987.1, ENST00000683114.1, ENST00000683511.1, ENST00000683925.1, ENST00000684107.1, ENST00000684439.1, ENST00000684506.1, ENST00000684517.1, ENST00000684607.1

Found 1532 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGAGGGGACAGGTACTTGAGAGACATGTGGGCCTGGCTGCCACTCTaGCCTCTGAGTTTCTGTAGGGTGCCCGGCTGCCACTCTGCCCTC +
Preference number: 1 (lower is better)
Translates to: RGDRYLRDMWAWLPL*PLSFCRVPGCHSAL
Trigger: GAGGGCAGAGTGGCAGCCGGGCACCCTACAGAAACTCAGAGGGCAGAGTGGCAGCCAGGCCCACATGTCTCTCAAGTACCTGTCCCCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR GCA 90 bp CATATCACTGCTGTTGATTTGTCATGCCAACGACTGTGCCTGCACTaGCGTGGTGAGGCCAGGCGGCCGCATGCGGGGCACGGAGCACTG +
Preference number: 1 (lower is better)
Translates to: HITAVDLSCQRLCLH*RGEARRPHAGHGAL
Trigger: CAGTGCTCCGTGCCCCGCATGCGGCCGCCTGGCCTCACCACGGCAGTGCAGGCACAGTCGTTGGCATGACAAATCAACAGCAGTGATATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470231.1
3UTR TCA 90 bp TGCCTGCCCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTaGCACTTTAACCTCATTCCAAAGCCAGCTCAGGTCTGCAGGAAG +
Preference number: 1 (lower is better)
Translates to: CLPRPHYTFGLRQRP*HFNLIPKPAQVCRK
Trigger: CTTCCTGCAGACCTGAGCTGGCTTTGGAATGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGGGCAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR CCA 90 bp CGTTTGATTCCAGTTTGGCTTCCGTGTCCCAGCTTACAACACCCGTaGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGG +
Preference number: 1 (lower is better)
Translates to: RLIPVWLPCPSLQHP*SFHIRLRAVPLSVG
Trigger: CCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAAGCCAAACTGGAATCAAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
3UTR TCA 90 bp CATGGGACGGACCTTGGGATGAGGGCGTTAATCCATGGGCCCCTCTaGGATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAA +
Preference number: 1 (lower is better)
Translates to: HGTDLGMRALIHGPL*DHFKHFGKTAQADE
Trigger: TTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGATCTCAGAGGGGCCCATGGATTAACGCCCTCATCCCAAGGTCCGTCCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR GCA 90 bp CTCTCACTGTTTCTGCCAATGGTGAAAAGACCACCAATAAGCTGCTaGCCTTCTCTCCCCCAACCATTCCCAACTTTCAGGCCAAAGACC +
Preference number: 1 (lower is better)
Translates to: LSLFLPMVKRPPISC*PSLPQPFPTFRPKT
Trigger: GGTCTTTGGCCTGAAAGTTGGGAATGGTTGGGGGAGAGAAGGGCAGCAGCTTATTGGTGGTCTTTTCACCATTGGCAGAAACAGTGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR GCA 90 bp CAGCTCTCACTGTTTCTGCCAATGGTGAAAAGACCACCAATAAGCTaGTGCCCTTCTCTCCCCCAACCATTCCCAACTTTCAGGCCAAAG +
Preference number: 1 (lower is better)
Translates to: QLSLFLPMVKRPPIS*CPSLPQPFPTFRPK
Trigger: CTTTGGCCTGAAAGTTGGGAATGGTTGGGGGAGAGAAGGGCAGCAGCTTATTGGTGGTCTTTTCACCATTGGCAGAAACAGTGAGAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR GCA 90 bp TGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTaGACCACACAGCTCTCACTGTTTCTGCCAATGGTGAAAAGACCA +
Preference number: 1 (lower is better)
Translates to: CRKAGKIPYTSFLDF*TTQLSLFLPMVKRP
Trigger: TGGTCTTTTCACCATTGGCAGAAACAGTGAGAGCTGTGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR TCA 90 bp CCAAGGAAGGGACTGAAACGGACTTGGAAAACTAAAGCAAAACCATaGCTGCCGGGATGGTCTCGTGTGGTGATTCTGCAAGAAATAATC +
Preference number: 1 (lower is better)
Translates to: PRKGLKRTWKTKAKP*LPGWSRVVILQEII
Trigger: GATTATTTCTTGCAGAATCACCACACGAGACCATCCCGGCAGTCATGGTTTTGCTTTAGTTTTCCAAGTCCGTTTCAGTCCCTTCCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR TCA 90 bp GAGTTCTGGTTTGCACCTAGTGTACTCAGGATCTTCTCAGCCCCCTaGACAAGCTTGCATTTCTTAAGATTCTCCAATATGTCCCTCAAG +
Preference number: 1 (lower is better)
Translates to: EFWFAPSVLRIFSAP*TSLHFLRFSNMSLK
Trigger: CTTGAGGGACATATTGGAGAATCTTAAGAAATGCAAGCTTGTTCAGGGGGCTGAGAAGATCCTGAGTACACTAGGTGCAAACCAGAACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR TCA 90 bp ATGTTTTATTTAATAAGTTATAAGATACAATTTACAGTCGGCGTTTaGTTCCAGTTTGGCTTCCGTGTCCCAGCTTACAACACCCGTGGT +
Preference number: 1 (lower is better)
Translates to: MFYLISYKIQFTVGV*FQFGFRVPAYNTRG
Trigger: ACCACGGGTGTTGTAAGCTGGGACACGGAAGCCAAACTGGAATCAAACGCCGACTGTAAATTGTATCTTATAACTTATTAAATAAAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
3UTR-3UTR TCA 90 bp CTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGATGAGGGCGTTGAGGGGACAGGTACTTaGGAGACATGTGGGCCTGGC +
Preference number: 2 (lower is better)
Translates to: LGRVWSVMSWDGPWDEGVEGTGT*ETCGPG
Trigger: GCCAGGCCCACATGTCTCTCAAGTACCTGTCCCCTC...AACGCCCTCATCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR TCA 90 bp TGGGACGGACCTTGGGATGAGGGCGTTAATCCATGGGCCCCTCTGAGATCACTTTGCCACTCTGCCCTCTaGGTTTCTGTAGGGTGCCCG +
Preference number: 2 (lower is better)
Translates to: WDGPWDEGVNPWAPLRSLCHSAL*VSVGCP
Trigger: CGGGCACCCTACAGAAACTCAGAGGGCAGAGTGGCA...AAGTGATCTCAGAGGGGCCCATGGATTAACGCCCTCATCCCAAGGTCCGTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR TCA 90 bp CTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTACCCCTGCCACTCTGCCCTCTaGGTTTCTGTAGGGTGCCCG +
Preference number: 2 (lower is better)
Translates to: LSHQAPGCSTFCRVGFYPCHSAL*VSVGCP
Trigger: CGGGCACCCTACAGAAACTCAGAGGGCAGAGTGGCA...GGGGTAAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR CCA 90 bp CTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTACCCCAGAGACATGTGGGCCTaGCTGCCACTCTGCCCTCTG +
Preference number: 2 (lower is better)
Translates to: LSHQAPGCSTFCRVGFYPRDMWA*LPLCPL
Trigger: CAGAGGGCAGAGTGGCAGCCAGGCCCACATGTCTCT...GGGGTAAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR TCA 90 bp TGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTTGGGGGTGTTGGCGATaGGGAGCGGTAAAGCAGTGC +
Preference number: 2 (lower is better)
Translates to: WSFHIRLRAVPLSVGWAFWGCWR*GAVKQC
Trigger: GCACTGCTTTACCGCTCCTCATCGCCAACACCCCCA...AAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR GCA 90 bp CCCAACACTCGCCCCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGAAGCAAAACCATGACTaGCGGGATGGTCTCGTGTGG +
Preference number: 2 (lower is better)
Translates to: PNTRPRYYTCHKSGHFLRKQNHD*RDGLVW
Trigger: CCACACGAGACCATCCCGGCAGTCATGGTTTTGCTT...CCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGGGCGAGTGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR CCA 90 bp GTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTAAAGCAGTGGTCTGTCTGCTGCAGTaGCTGGTCTGTTCCACCAAG +
Preference number: 2 (lower is better)
Translates to: VRRPQSMGVLAMRSGKAVVCLLQ*LVCSTK
Trigger: CTTGGTGGAACAGACCAGCCACTGCAGCAGACAGAC...CACTGCTTTACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR CCA 90 bp ATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGAGGGATCTTTGGCAAGTaGGAAACTGCTCGCCACTGC +
Preference number: 2 (lower is better)
Translates to: MKLAGAGVECYVMGRTLGGIFGK*ETARHC
Trigger: GCAGTGGCGAGCAGTTTCCCACTTGCCAAAGATCCC...TCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAGCCAACTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR CCA 90 bp TTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCGGGCTGTCATGGGACGGACCTTaGGATGAGGGCGTTAATCCA +
Preference number: 2 (lower is better)
Translates to: FRVPAYNTRGPFTSGSGLSWDGP*DEGVNP
Trigger: TGGATTAACGCCCTCATCCCAAGGTCCGTCCCATGA...CAGCCCGGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
3UTR-3UTR TCA 90 bp TTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCGGGCTGACTAAAGCAAAACCATaGCTGCCGGGATGGTCTCGT +
Preference number: 2 (lower is better)
Translates to: FRVPAYNTRGPFTSGSGLTKAKP*LPGWSR
Trigger: ACGAGACCATCCCGGCAGTCATGGTTTTGCTTTAGT...CAGCCCGGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
3UTR-3UTR GCA 90 bp CTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTACCCCTCCTGGTCTGTCTGCTaGAGTGGCTGGTCTGTTCCA +
Preference number: 2 (lower is better)
Translates to: LSHQAPGCSTFCRVGFYPSWSVC*SGWSVP
Trigger: TGGAACAGACCAGCCACTGCAGCAGACAGACCAGGA...GGGGTAAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR GCA 90 bp CTGAGAAGTGTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTTGTTCCTGGTCTGTCTaGTGCAGTGGCTGGTCTGTT +
Preference number: 2 (lower is better)
Translates to: LRSVRRPQSMGVLAMRSGCSWSV*CSGWSV
Trigger: AACAGACCAGCCACTGCAGCAGACAGACCAGGAACA...ACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTACACTTCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR GCA 90 bp TTTGGCTTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCCCACCAATAAGCTGCTaGCCTTCTCTCCCCCAACCA +
Preference number: 2 (lower is better)
Translates to: FGFRVPAYNTRGPFTSGSPPISC*PSLPQP
Trigger: TGGTTGGGGGAGAGAAGGGCAGCAGCTTATTGGTGG...GGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAAGCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
3UTR-3UTR GCA 90 bp TTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCGGGCTGAAGCCAGCTCAGGTCTaGAGGAAGGCAGGCAAAATT +
Preference number: 2 (lower is better)
Translates to: FRVPAYNTRGPFTSGSGLKPAQV*RKAGKI
Trigger: AATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTT...CAGCCCGGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
3UTR-3UTR CCA 90 bp TGGGACGGACCTTGGGATGAGGGCGTTAATCCATGGGCCCCTCTGAGATCACTTGTCTCATTGTGTTCCTaGTCTGTCTGCTGCAGTGGC +
Preference number: 2 (lower is better)
Translates to: WDGPWDEGVNPWAPLRSLVSLCS*SVCCSG
Trigger: GCCACTGCAGCAGACAGACCAGGAACACAATGAGAC...AAGTGATCTCAGAGGGGCCCATGGATTAACGCCCTCATCCCAAGGTCCGTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR CCA 90 bp TCTGCCTGCCCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTGTCTCATTGTGTTCCTaGTCTGTCTGCTGCAGTGGC +
Preference number: 2 (lower is better)
Translates to: SACPDHTTHLGSGNVPDTVSLCS*SVCCSG
Trigger: GCCACTGCAGCAGACAGACCAGGAACACAATGAGAC...AGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGGGCAGGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR TCA 90 bp GCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCGAGGGGACAGGTACTTaGGAGACATGTGGGCCTGGC +
Preference number: 2 (lower is better)
Translates to: AQVCRKAGKIPYTSFLDFEGTGT*ETCGPG
Trigger: GCCAGGCCCACATGTCTCTCAAGTACCTGTCCCCTC...GAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR TCA 90 bp CCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGAGAGGGGACAGGTACTTaGGAGACATGTGGGCCTGGC +
Preference number: 2 (lower is better)
Translates to: PTFRPKTRRSFILSCLYREGTGT*ETCGPG
Trigger: GCCAGGCCCACATGTCTCTCAAGTACCTGTCCCCTC...TCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR CCA 90 bp CTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTACCCCGTCTGCTGCAGTGGCTaGTCTGTTCCACCAAGAGTT +
Preference number: 2 (lower is better)
Translates to: LSHQAPGCSTFCRVGFYPVCCSG*SVPPRV
Trigger: AACTCTTGGTGGAACAGACCAGCCACTGCAGCAGAC...GGGGTAAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR CCA 90 bp GTGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTCATGGGACGGACCTTaGGATGAGGGCGTTAATCCA +
Preference number: 2 (lower is better)
Translates to: VVLSHQAPGCSTFCRVGFSWDGP*DEGVNP
Trigger: TGGATTAACGCCCTCATCCCAAGGTCCGTCCCATGA...AAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR CAA 90 bp GTCTGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTaGCACCTAGTGTACTCAGGATCTTCTCAGCCCCCTGAACAAGCT +
Preference number: 2 (lower is better)
Translates to: VCLLQWLVCSTKSSG*HLVYSGSSQPPEQA
Trigger: AGCTTGTTCAGGGGGCTGAGAAGATCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR TCA 90 bp CACTTTAACCTCATTCCAAAGCCAGCTCAGGTCTGCAGGAAGGCAGGCAAAATTTGGGGGTGTTGGCGATaGGGAGCGGTAAAGCAGTGC +
Preference number: 2 (lower is better)
Translates to: HFNLIPKPAQVCRKAGKIWGCWR*GAVKQC
Trigger: GCACTGCTTTACCGCTCCTCATCGCCAACACCCCCA...AATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGGAATGAGGTTAAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR TCA 90 bp ATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTGGAGCGTGGAGGGGACAGGTACTTaGGAGACATGTGGGCCTGGC +
Preference number: 2 (lower is better)
Translates to: ITLNILVRLPRLMKGWSVEGTGT*ETCGPG
Trigger: GCCAGGCCCACATGTCTCTCAAGTACCTGTCCCCTC...CACGCTCCAGCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR TCA 90 bp GTGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTCTCAGGCAACGTCCCTaGCACTTTAACCTCATTCCA +
Preference number: 2 (lower is better)
Translates to: VVLSHQAPGCSTFCRVGFLRQRP*HFNLIP
Trigger: TGGAATGAGGTTAAAGTGTCAGGGACGTTGCCTGAG...AAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR GCA 90 bp GCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCGCCCGGCTGCCACTCTaGCCTCTGAGAAGTGTAAGA +
Preference number: 2 (lower is better)
Translates to: AQVCRKAGKIPYTSFLDFARLPL*PLRSVR
Trigger: TCTTACACTTCTCAGAGGGCAGAGTGGCAGCCGGGC...GAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR GCA 90 bp CCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAACCACCAATAAGCTGCTaGCCTTCTCTCCCCCAACCA +
Preference number: 2 (lower is better)
Translates to: PDTTPATRVATSSGLSSKPPISC*PSLPQP
Trigger: TGGTTGGGGGAGAGAAGGGCAGCAGCTTATTGGTGG...TTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR GCA 90 bp CTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTACCCCAAGCCAGCTCAGGTCTaGAGGAAGGCAGGCAAAATT +
Preference number: 2 (lower is better)
Translates to: LSHQAPGCSTFCRVGFYPKPAQV*RKAGKI
Trigger: AATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTT...GGGGTAAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR CCA 90 bp ATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGAGCCCCACAAACAGGCTaGAGGGCTTTGTATAAAATG +
Preference number: 2 (lower is better)
Translates to: MKLAGAGVECYVMGRTLGAPQTG*RALYKM
Trigger: CATTTTATACAAAGCCCTCCAGCCTGTTTGTGGGGC...TCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAGCCAACTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
3UTR-3UTR CCA 90 bp ACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCATTCCAAAGCAGAGACATGTGGGCCTaGCTGCCACTCTGCCCTCTG +
Preference number: 2 (lower is better)
Translates to: TTHLGSGNVPDTLTSFQSRDMWA*LPLCPL
Trigger: CAGAGGGCAGAGTGGCAGCCAGGCCCACATGTCTCT...GCTTTGGAATGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR CCA 90 bp CTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTAGAGACATGTGGGCCTaGCTGCCACTCTGCCCTCTG +
Preference number: 2 (lower is better)
Translates to: LRSAGRQAKFPTPHFWISRDMWA*LPLCPL
Trigger: CAGAGGGCAGAGTGGCAGCCAGGCCCACATGTCTCT...AGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR CCA 90 bp TCATTCCAAAGCCAGCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTGGGATCTTTGGCAAGTaGGAAACTGCTCGCCACTGC +
Preference number: 2 (lower is better)
Translates to: SFQSQLRSAGRQAKFPTPGIFGK*ETARHC
Trigger: GCAGTGGCGAGCAGTTTCCCACTTGCCAAAGATCCC...AGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGGAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR GCA 90 bp TCCCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACATCCTGGTCTGTCTGCTaGAGTGGCTGGTCTGTTCCA +
Preference number: 2 (lower is better)
Translates to: SQLSGQRPAGVSFCPVCTSWSVC*SGWSVP
Trigger: TGGAACAGACCAGCCACTGCAGCAGACAGACCAGGA...TGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR GCA 90 bp TGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACAGCCCGGCTGCCACTCTaGCCTCTGAGAAGTGTAAGA +
Preference number: 2 (lower is better)
Translates to: CRKAGKIPYTSFLDFCTTARLPL*PLRSVR
Trigger: TCTTACACTTCTCAGAGGGCAGAGTGGCAGCCGGGC...TGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR GCA 90 bp CCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCAAAGCAAAACCATGACTaGCGGGATGGTCTCGTGTGG +
Preference number: 2 (lower is better)
Translates to: PDHTTHLGSGNVPDTLTSKQNHD*RDGLVW
Trigger: CCACACGAGACCATCCCGGCAGTCATGGTTTTGCTT...TGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR GCA 90 bp TGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTCAAAACCTAAAGGTCTaGCTGCCCAGACCACACTAC +
Preference number: 2 (lower is better)
Translates to: WSFHIRLRAVPLSVGWAFQNLKV*LPRPHY
Trigger: GTAGTGTGGTCTGGGCAGGCAGACCTTTAGGTTTTG...AAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR CCA 90 bp CCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGAGTCTGTCTGCTGCAGTaGCTGGTCTGTTCCACCAAG +
Preference number: 2 (lower is better)
Translates to: PTFRPKTRRSFILSCLYRVCLLQ*LVCSTK
Trigger: CTTGGTGGAACAGACCAGCCACTGCAGCAGACAGAC...TCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR CCA 90 bp AGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCATGGCTGGGGCGGGTGTaGAGTGTTATGTCATGGGAC +
Preference number: 2 (lower is better)
Translates to: RSAGRQAKFPTPHFWISAWLGRV*SVMSWD
Trigger: GTCCCATGACATAACACTCCACACCCGCCCCAGCCA...TGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR TCA 90 bp TCTGCCTGCCCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTATCCATGGGCCCCTCTaGGATCACTTTAAACATTTT +
Preference number: 2 (lower is better)
Translates to: SACPDHTTHLGSGNVPDTIHGPL*DHFKHF
Trigger: AAAATGTTTAAAGTGATCTCAGAGGGGCCCATGGAT...AGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGGGCAGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR TCA 90 bp AGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCAAGAAAAAGTGACCCATaGAGTTGGCTGGGGCGGGTG +
Preference number: 2 (lower is better)
Translates to: RSAGRQAKFPTPHFWISARKSDP*SWLGRV
Trigger: CACCCGCCCCAGCCAACTTCATGGGTCACTTTTTCT...TGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR GCA 90 bp CTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTTCCTGGTCTGTCTGCTaGAGTGGCTGGTCTGTTCCA +
Preference number: 2 (lower is better)
Translates to: LRSAGRQAKFPTPHFWISSWSVC*SGWSVP
Trigger: TGGAACAGACCAGCCACTGCAGCAGACAGACCAGGA...AGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR GCA 90 bp GAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACACAGCTTCCTGGTCTGTCTGCTaGAGTGGCTGGTCTGTTCCA +
Preference number: 2 (lower is better)
Translates to: EGRQNSLHLISGFLHHTASWSVC*SGWSVP
Trigger: TGGAACAGACCAGCCACTGCAGCAGACAGACCAGGA...AGCTGTGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR GCA 90 bp CTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTACCCCGAAACTGCTCGCCACTaGAGAATTTCTTCAGACCAA +
Preference number: 2 (lower is better)
Translates to: LSHQAPGCSTFCRVGFYPETARH*RISSDQ
Trigger: TTGGTCTGAAGAAATTCTGCAGTGGCGAGCAGTTTC...GGGGTAAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR GCA 90 bp GTGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTGAAACTGCTCGCCACTaGAGAATTTCTTCAGACCAA +
Preference number: 2 (lower is better)
Translates to: VVLSHQAPGCSTFCRVGFETARH*RISSDQ
Trigger: TTGGTCTGAAGAAATTCTGCAGTGGCGAGCAGTTTC...AAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR CCA 90 bp TCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCAGTCTGTCTGCTGCAGTaGCTGGTCTGTTCCACCAAG +
Preference number: 2 (lower is better)
Translates to: SAGRQAKFPTPHFWISAPVCLLQ*LVCSTK
Trigger: CTTGGTGGAACAGACCAGCCACTGCAGCAGACAGAC...TGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR CCA 90 bp TCCCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGTCTCATTGTGTTCCTaGTCTGTCTGCTGCAGTGGC +
Preference number: 2 (lower is better)
Translates to: SQLSGQRPAGVSFCPVCTVSLCS*SVCCSG
Trigger: GCCACTGCAGCAGACAGACCAGGAACACAATGAGAC...TGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR GCA 90 bp ATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTGGAGCGTGAAGCAAAACCATGACTaGCGGGATGGTCTCGTGTGG +
Preference number: 2 (lower is better)
Translates to: ITLNILVRLPRLMKGWSVKQNHD*RDGLVW
Trigger: CCACACGAGACCATCCCGGCAGTCATGGTTTTGCTT...CACGCTCCAGCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR CCA 90 bp AGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCAGTCTGCTGCAGTGGCTaGTCTGTTCCACCAAGAGTT +
Preference number: 2 (lower is better)
Translates to: RSAGRQAKFPTPHFWISAVCCSG*SVPPRV
Trigger: AACTCTTGGTGGAACAGACCAGCCACTGCAGCAGAC...TGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR CCA 90 bp AGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCAGTCTCATTGTGTTCCTaGTCTGTCTGCTGCAGTGGC +
Preference number: 2 (lower is better)
Translates to: RSAGRQAKFPTPHFWISAVSLCS*SVCCSG
Trigger: GCCACTGCAGCAGACAGACCAGGAACACAATGAGAC...TGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR CCA 90 bp GAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACACAGCTGAGGGCGTTAATCCATaGGCCCCTCTGAGATCACTT +
Preference number: 2 (lower is better)
Translates to: EGRQNSLHLISGFLHHTAEGVNP*APLRSL
Trigger: AAGTGATCTCAGAGGGGCCCATGGATTAACGCCCTC...AGCTGTGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR TCA 90 bp GTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTAAAGCAGTGTCTAGGACTTATTTCTaGAGGCATTTTACAACAGCA +
Preference number: 2 (lower is better)
Translates to: VRRPQSMGVLAMRSGKAVSRTYF*RHFTTA
Trigger: TGCTGTTGTAAAATGCCTTCAGAAATAAGTCCTAGA...CACTGCTTTACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR GCA 90 bp CCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAATCATTTCTGGATTTCTaGACCACACAGCTCTCACTG +
Preference number: 2 (lower is better)
Translates to: PDTTPATRVATSSGLSSKSFLDF*TTQLSL
Trigger: CAGTGAGAGCTGTGTGGTGCAGAAATCCAGAAATGA...TTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR CCA 90 bp GGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACGCCCCACAAACAGGCTaGAGGGCTTTGTATAAAATG +
Preference number: 2 (lower is better)
Translates to: GLQEGRQNSLHLISGFLHAPQTG*RALYKM
Trigger: CATTTTATACAAAGCCCTCCAGCCTGTTTGTGGGGC...GTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
3UTR-3UTR CCA 90 bp TCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCATGGAGTGTTATGTCATaGGACGGACCTTGGGATGAG +
Preference number: 2 (lower is better)
Translates to: SAGRQAKFPTPHFWISAPWSVMS*DGPWDE
Trigger: CTCATCCCAAGGTCCGTCCCATGACATAACACTCCA...TGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR CCA 90 bp AGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCAGCCCCACAAACAGGCTaGAGGGCTTTGTATAAAATG +
Preference number: 2 (lower is better)
Translates to: RSAGRQAKFPTPHFWISAAPQTG*RALYKM
Trigger: CATTTTATACAAAGCCCTCCAGCCTGTTTGTGGGGC...TGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
3UTR-3UTR TCA 90 bp TGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTTCTAGGACTTATTTCTaGAGGCATTTTACAACAGCA +
Preference number: 2 (lower is better)
Translates to: WSFHIRLRAVPLSVGWAFSRTYF*RHFTTA
Trigger: TGCTGTTGTAAAATGCCTTCAGAAATAAGTCCTAGA...AAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR TCA 90 bp ATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTGGAGCGTGATCTTCTCAGCCCCCTaGACAAGCTTGCATTTCTTA +
Preference number: 2 (lower is better)
Translates to: ITLNILVRLPRLMKGWSVIFSAP*TSLHFL
Trigger: TAAGAAATGCAAGCTTGTTCAGGGGGCTGAGAAGAT...CACGCTCCAGCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR TCA 90 bp CACTTTAACCTCATTCCAAAGCCAGCTCAGGTCTGCAGGAAGGCAGGCAAAATTATCTTCTCAGCCCCCTaGACAAGCTTGCATTTCTTA +
Preference number: 2 (lower is better)
Translates to: HFNLIPKPAQVCRKAGKIIFSAP*TSLHFL
Trigger: TAAGAAATGCAAGCTTGTTCAGGGGGCTGAGAAGAT...AATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGGAATGAGGTTAAAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR TCA 90 bp TACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAAACCTATTGTTTCATAAATGCTaGAGAGTGAACCAGCAGCTC +
Preference number: 2 (lower is better)
Translates to: YYTCHKSGHFLRTKQQNLLFHKC*RVNQQL
Trigger: GAGCTGCTGGTTCACTCTTCAGCATTTATGAAACAA...TAGGTTTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR GCA 90 bp TGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACAGAAACTGCTCGCCACTaGAGAATTTCTTCAGACCAA +
Preference number: 2 (lower is better)
Translates to: CRKAGKIPYTSFLDFCTTETARH*RISSDQ
Trigger: TTGGTCTGAAGAAATTCTGCAGTGGCGAGCAGTTTC...TGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR CCA 90 bp CCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGGGGATCTTTGGCAAGTaGGAAACTGCTCGCCACTGC +
Preference number: 2 (lower is better)
Translates to: PQEFHSVLSVQIIIFQKKGIFGK*ETARHC
Trigger: GCAGTGGCGAGCAGTTTCCCACTTGCCAAAGATCCC...CTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR TCA 90 bp CTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTTTGTTTCATAAATGCTaGAGAGTGAACCAGCAGCTC +
Preference number: 2 (lower is better)
Translates to: LRSAGRQAKFPTPHFWISLFHKC*RVNQQL
Trigger: GAGCTGCTGGTTCACTCTTCAGCATTTATGAAACAA...AGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR TCA 90 bp ATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTGGAGCGTGTTGTTTCATAAATGCTaGAGAGTGAACCAGCAGCTC +
Preference number: 2 (lower is better)
Translates to: ITLNILVRLPRLMKGWSVLFHKC*RVNQQL
Trigger: GAGCTGCTGGTTCACTCTTCAGCATTTATGAAACAA...CACGCTCCAGCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR GCA 90 bp CCAGAAAAAGTGACCCATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATTTAAGTCATCTCCTTTaGCAAATGACAACCAAACTA +
Preference number: 2 (lower is better)
Translates to: PEKVTHEVGWGGCGVLCHLSHLL*QMTTKL
Trigger: TAGTTTGGTTGTCATTTGGCAAAGGAGATGACTTAA...ATGACATAACACTCCACACCCGCCCCAGCCAACTTCATGGGTCACTTTTTCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR CCA 90 bp GAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACACAGCTGGACTGAAACGGACTTaGAAAACTAAAGCAAAACCA +
Preference number: 2 (lower is better)
Translates to: EGRQNSLHLISGFLHHTAGLKRT*KTKAKP
Trigger: TGGTTTTGCTTTAGTTTTCCAAGTCCGTTTCAGTCC...AGCTGTGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR CCA 90 bp CACTTTAACCTCATTCCAAAGCCAGCTCAGGTCTGCAGGAAGGCAGGCAAAATTGGACTGAAACGGACTTaGAAAACTAAAGCAAAACCA +
Preference number: 2 (lower is better)
Translates to: HFNLIPKPAQVCRKAGKIGLKRT*KTKAKP
Trigger: TGGTTTTGCTTTAGTTTTCCAAGTCCGTTTCAGTCC...AATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGGAATGAGGTTAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR CCA 90 bp ACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCATTCCAAAGCGGACTGAAACGGACTTaGAAAACTAAAGCAAAACCA +
Preference number: 2 (lower is better)
Translates to: TTHLGSGNVPDTLTSFQSGLKRT*KTKAKP
Trigger: TGGTTTTGCTTTAGTTTTCCAAGTCCGTTTCAGTCC...GCTTTGGAATGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR GCA 90 bp CCCTCTGAGATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTTAAGTCATCTCCTTTaGCAAATGACAACCAAACTA +
Preference number: 2 (lower is better)
Translates to: PSEITLNILVRLPRLMKGLSHLL*QMTTKL
Trigger: TAGTTTGGTTGTCATTTGGCAAAGGAGATGACTTAA...GCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGATCTCAGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR CCA 90 bp CCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGGGACTGAAACGGACTTaGAAAACTAAAGCAAAACCA +
Preference number: 2 (lower is better)
Translates to: PQEFHSVLSVQIIIFQKKGLKRT*KTKAKP
Trigger: TGGTTTTGCTTTAGTTTTCCAAGTCCGTTTCAGTCC...CTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR TCA 90 bp CCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGTCTAGGACTTATTTCTaGAGGCATTTTACAACAGCA +
Preference number: 2 (lower is better)
Translates to: PQEFHSVLSVQIIIFQKKSRTYF*RHFTTA
Trigger: TGCTGTTGTAAAATGCCTTCAGAAATAAGTCCTAGA...CTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR GCA 72 bp GCTGTTGATTTGTCATGCCAACGACTGTGCCTGCACTaGCGTGGTGAGGCCAGGCGGCCGCATGCGGGGCAC +
Preference number: 3 (lower is better)
Translates to: AVDLSCQRLCLH*RGEARRPHAGH
Trigger: GTGCCCCGCATGCGGCCGCCTGGCCTCACCACGGCAGTGCAGGCACAGTCGTTGGCATGACAAATCAACAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470231.1
3UTR GCA 72 bp TCACTGCTGTTGATTTGTCATGCCAACGACTGTGCCTaGACTGCCGTGGTGAGGCCAGGCGGCCGCATGCGG +
Preference number: 3 (lower is better)
Translates to: SLLLICHANDCA*TAVVRPGGRMR
Trigger: CCGCATGCGGCCGCCTGGCCTCACCACGGCAGTGCAGGCACAGTCGTTGGCATGACAAATCAACAGCAGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470231.1
3UTR CCA 72 bp GGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTaGGATGAGGGCGTTAATCCATGGGCCCCTCTGAGA +
Preference number: 3 (lower is better)
Translates to: GRVWSVMSWDGP*DEGVNPWAPLR
Trigger: TCTCAGAGGGGCCCATGGATTAACGCCCTCATCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR CAA 90 bp TTTGGCTTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCCGAGGGGACAGGTACTaGAGAGACATGTGGGCCTGG +
Preference number: 3 (lower is better)
Translates to: FGFRVPAYNTRGPFTSGSRGDRY*RDMWAW
Trigger: CCAGGCCCACATGTCTCTCAAGTACCTGTCCCCTCG...GGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAAGCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
3UTR GCA 72 bp CATATCACTGCTGTTGATTTGTCATGCCAACGACTGTaGCTGCACTGCCGTGGTGAGGCCAGGCGGCCGCAT +
Preference number: 3 (lower is better)
Translates to: HITAVDLSCQRL*LHCRGEARRPH
Trigger: ATGCGGCCGCCTGGCCTCACCACGGCAGTGCAGGCACAGTCGTTGGCATGACAAATCAACAGCAGTGATATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470231.1
3UTR TCA 72 bp GCAAGAAATAATCACCAGAGCGAGGGGACAGGTACTTaGGAGACATGTGGGCCTGGCTGCCACTCTGCCCTC +
Preference number: 3 (lower is better)
Translates to: ARNNHQSEGTGT*ETCGPGCHSAL
Trigger: GAGGGCAGAGTGGCAGCCAGGCCCACATGTCTCTCAAGTACCTGTCCCCTCGCTCTGGTGATTATTTCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR CCA 72 bp CCAGTTTGGCTTCCGTGTCCCAGCTTACAACACCCGTaGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTT +
Preference number: 3 (lower is better)
Translates to: PVWLPCPSLQHP*SFHIRLRAVPL
Trigger: AAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAAGCCAAACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
3UTR-3UTR CAA 90 bp CCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAACGAGGGGACAGGTACTaGAGAGACATGTGGGCCTGG +
Preference number: 3 (lower is better)
Translates to: PDTTPATRVATSSGLSSKRGDRY*RDMWAW
Trigger: CCAGGCCCACATGTCTCTCAAGTACCTGTCCCCTCG...TTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR CAA 90 bp TACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAAACCTACGAGGGGACAGGTACTaGAGAGACATGTGGGCCTGG +
Preference number: 3 (lower is better)
Translates to: YYTCHKSGHFLRTKQQNLRGDRY*RDMWAW
Trigger: CCAGGCCCACATGTCTCTCAAGTACCTGTCCCCTCG...TAGGTTTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR CAA 90 bp TACCCCCAACACTCGCCCCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTACCAAGAGTTCTGGTTaGCACCTAGTGTACTCAGGA +
Preference number: 3 (lower is better)
Translates to: YPQHSPQILHLPQEWPLPTKSSG*HLVYSG
Trigger: TCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGT...AGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGGGCGAGTGTTGGGGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR CAA 90 bp GCCGGGATGGTCTCGTGTGGTGATTCTGCAAGAAATAATCACCAGAGCGAGGGGACCAAGAGTTCTGGTTaGCACCTAGTGTACTCAGGA +
Preference number: 3 (lower is better)
Translates to: AGMVSCGDSARNNHQSEGTKSSG*HLVYSG
Trigger: TCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGT...CCCCTCGCTCTGGTGATTATTTCTTGCAGAATCACCACACGAGACCATCCCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR CAA 90 bp TGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTGAAATGTCAGTCTCATaGTGTTCCTGGTCTGTCTGC +
Preference number: 3 (lower is better)
Translates to: WSFHIRLRAVPLSVGWAFEMSVS*CSWSVC
Trigger: GCAGACAGACCAGGAACACAATGAGACTGACATTTC...AAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR CAA 90 bp CTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGATGAGGGCGTTTTTAAGTCATCTCCTTaGCCAAATGACAACCAAACT +
Preference number: 3 (lower is better)
Translates to: LGRVWSVMSWDGPWDEGVFKSSP*PNDNQT
Trigger: AGTTTGGTTGTCATTTGGCAAAGGAGATGACTTAAA...AACGCCCTCATCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR TCA 72 bp AGACCACACTACACATTTGGGCTCAGGCAACGTCCCTaGCACTTTAACCTCATTCCAAAGCCAGCTCAGGTC +
Preference number: 3 (lower is better)
Translates to: RPHYTFGLRQRP*HFNLIPKPAQV
Trigger: GACCTGAGCTGGCTTTGGAATGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR TCA 72 bp GACCTTGGGATGAGGGCGTTAATCCATGGGCCCCTCTaGGATCACTTTAAACATTTTGGTAAGACTGCCCAG +
Preference number: 3 (lower is better)
Translates to: DLGMRALIHGPL*DHFKHFGKTAQ
Trigger: CTGGGCAGTCTTACCAAAATGTTTAAAGTGATCTCAGAGGGGCCCATGGATTAACGCCCTCATCCCAAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR GCA 72 bp GAAATGTCAGTCTCATTGTGTTCCTGGTCTGTCTGCTaGAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTT +
Preference number: 3 (lower is better)
Translates to: EMSVSLCSWSVC*SGWSVPPRVLV
Trigger: AACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACAGACCAGGAACACAATGAGACTGACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR CCA 72 bp GCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTaGATTTCTGCACCACACAGCTCTCACTGTTTCTGC +
Preference number: 3 (lower is better)
Translates to: AGRQAKFPTPHF*ISAPHSSHCFC
Trigger: GCAGAAACAGTGAGAGCTGTGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR CAA 90 bp TCCCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAACCAAGAGTTCTGGTTaGCACCTAGTGTACTCAGGA +
Preference number: 3 (lower is better)
Translates to: SQLSGQRPAGVSFCPVCTTKSSG*HLVYSG
Trigger: TCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGT...TGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR TCA 72 bp GGACTGAAACGGACTTGGAAAACTAAAGCAAAACCATaGCTGCCGGGATGGTCTCGTGTGGTGATTCTGCAA +
Preference number: 3 (lower is better)
Translates to: GLKRTWKTKAKP*LPGWSRVVILQ
Trigger: TTGCAGAATCACCACACGAGACCATCCCGGCAGTCATGGTTTTGCTTTAGTTTTCCAAGTCCGTTTCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR GCA 72 bp TTTGAAATGTCAGTCTCATTGTGTTCCTGGTCTGTCTaGTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTG +
Preference number: 3 (lower is better)
Translates to: FEMSVSLCSWSV*CSGWSVPPRVL
Trigger: CAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACAGACCAGGAACACAATGAGACTGACATTTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR GCA 72 bp GCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTaGACCACACAGCTCTCACTGTTTCTGCCAATGGTG +
Preference number: 3 (lower is better)
Translates to: AGKIPYTSFLDF*TTQLSLFLPMV
Trigger: CACCATTGGCAGAAACAGTGAGAGCTGTGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR CAA 90 bp TGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACAACCAAGAGTTCTGGTTaGCACCTAGTGTACTCAGGA +
Preference number: 3 (lower is better)
Translates to: CRKAGKIPYTSFLDFCTTTKSSG*HLVYSG
Trigger: TCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGT...TGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR CAA 90 bp GGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACATCACTTTAAACATTTaGGTAAGACTGCCCAGGCTG +
Preference number: 3 (lower is better)
Translates to: GLQEGRQNSLHLISGFLHITLNI*VRLPRL
Trigger: CAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGAT...GTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR CAA 90 bp AGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCAATCACTTTAAACATTTaGGTAAGACTGCCCAGGCTG +
Preference number: 3 (lower is better)
Translates to: RSAGRQAKFPTPHFWISAITLNI*VRLPRL
Trigger: CAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGAT...TGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR-3UTR CAA 90 bp CCCTCTGAGATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTTTAAGTCATCTCCTTaGCCAAATGACAACCAAACT +
Preference number: 3 (lower is better)
Translates to: PSEITLNILVRLPRLMKGFKSSP*PNDNQT
Trigger: AGTTTGGTTGTCATTTGGCAAAGGAGATGACTTAAA...GCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGATCTCAGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
3UTR TCA 72 bp TTAATAAGTTATAAGATACAATTTACAGTCGGCGTTTaGTTCCAGTTTGGCTTCCGTGTCCCAGCTTACAAC +
Preference number: 3 (lower is better)
Translates to: LISYKIQFTVGV*FQFGFRVPAYN
Trigger: GTTGTAAGCTGGGACACGGAAGCCAAACTGGAATCAAACGCCGACTGTAAATTGTATCTTATAACTTATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GCCTGCACTGCCGTGGTGAGGCCAGGCGGCCGCATGCGGGGCACGGAGCACTGCCCTGCACTGCCGTGGTaGGGCCAGGCGGCCGCATGC +
Preference number: 4 (lower is better)
Translates to: ACTAVVRPGGRMRGTEHCPALPW*GQAAAC
Trigger: GCATGCGGCCGCCTGGCCTCACCACGGCAGTGCAGG...GCAGTGCTCCGTGCCCCGCATGCGGCCGCCTGGCCTCACCACGGCAGTGCAGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470231.1
CDS-3UTR GCA 90 bp GCCTGCACTGCCGTGGTGAGGCCAGGCGGCCGCATGCGGGGCACGGAGCACTGCCGGGGCACGGAGCACTaGCATCACCTAGAGCCAGTA +
Preference number: 4 (lower is better)
Translates to: ACTAVVRPGGRMRGTEHCRGTEH*HHLEPV
Trigger: TACTGGCTCTAGGTGATGGCAGTGCTCCGTGCCCCG...GCAGTGCTCCGTGCCCCGCATGCGGCCGCCTGGCCTCACCACGGCAGTGCAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470231.1
CDS-3UTR CCA 90 bp GCCTGCACTGCCGTGGTGAGGCCAGGCGGCCGCATGCGGGGCACGGAGCACTGCGATCTTCACGGTAAATaGGCTCCCAGGCACGTGCTC +
Preference number: 4 (lower is better)
Translates to: ACTAVVRPGGRMRGTEHCDLHGK*APRHVL
Trigger: GAGCACGTGCCTGGGAGCCCATTTACCGTGAAGATC...GCAGTGCTCCGTGCCCCGCATGCGGCCGCCTGGCCTCACCACGGCAGTGCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470231.1
CDS-3UTR CCA 90 bp GCCTGCACTGCCGTGGTGAGGCCAGGCGGCCGCATGCGGGGCACGGAGCACTGCCATGACTCTGACCCCTaGGATTTTCAGGTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: ACTAVVRPGGRMRGTEHCHDSDP*DFQVQV
Trigger: GACCTGAACCTGAAAATCCCAGGGGTCAGAGTCATG...GCAGTGCTCCGTGCCCCGCATGCGGCCGCCTGGCCTCACCACGGCAGTGCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000470231.1
CDS-3UTR TCA 90 bp TTTGGCTTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCCGGCGGGCTCCACCTTaGCCCGGGCGGGGAAGTGTG +
Preference number: 4 (lower is better)
Translates to: FGFRVPAYNTRGPFTSGSRRAPP*PGRGSV
Trigger: CACACTTCCCCGCCCGGGTCAAGGTGGAGCCCGCCG...GGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAAGCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TCACCAGAGCGAGGGGACAGGTACTTGAGAGACATGTGGGCCTGGCTGCCACTCGGCGTCGTCGGAGGGTaGGATGACCGGCACCAGGTA +
Preference number: 4 (lower is better)
Translates to: SPERGDRYLRDMWAWLPLGVVGG*DDRHQV
Trigger: TACCTGGTGCCGGTCATCGCACCCTCCGACGACGCC...GAGTGGCAGCCAGGCCCACATGTCTCTCAAGTACCTGTCCCCTCGCTCTGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGATGAGGGCGTTAAATGCTCCCGACAGTaGCCACGGACGGGGCCCGAC +
Preference number: 4 (lower is better)
Translates to: LGRVWSVMSWDGPWDEGVKCSRQ*PRTGPD
Trigger: GTCGGGCCCCGTCCGTGGCCACTGTCGGGAGCATTT...AACGCCCTCATCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TCACCAGAGCGAGGGGACAGGTACTTGAGAGACATGTGGGCCTGGCTGCCACTCCGGGGCCGGCAATCTTaGCCTTGCTGGGGTCCACAA +
Preference number: 4 (lower is better)
Translates to: SPERGDRYLRDMWAWLPLRGRQS*PCWGPQ
Trigger: TTGTGGACCCCAGCAAGGTCAAGATTGCCGGCCCCG...GAGTGGCAGCCAGGCCCACATGTCTCTCAAGTACCTGTCCCCTCGCTCTGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CCCAACACTCGCCCCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGGGCCAGAGGGGCTGGTaGCGTGGGCCGACATATCAC +
Preference number: 4 (lower is better)
Translates to: PNTRPRYYTCHKSGHFLRGQRGW*RGPTYH
Trigger: GTGATATGTCGGCCCACGTCACCAGCCCCTCTGGCC...CCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGGGCGAGTGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCGGGCTGGGCCAGAGGGGCTGGTaGCGTGGGCCGACATATCAC +
Preference number: 4 (lower is better)
Translates to: FRVPAYNTRGPFTSGSGLGQRGW*RGPTYH
Trigger: GTGATATGTCGGCCCACGTCACCAGCCCCTCTGGCC...CAGCCCGGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGATGAGGGCGTTCCGTGGCCAGGCACTTaGTGGCATCACCCGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LGRVWSVMSWDGPWDEGVPWPGT*WHHPSV
Trigger: CACAGACGGGTGATGCCAGCAAGTGCCTGGCCACGG...AACGCCCTCATCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CCCAACACTCGCCCCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGCGGCCTCGGCCTCAGTaGCATCTGGGGTCAGAACCG +
Preference number: 4 (lower is better)
Translates to: PNTRPRYYTCHKSGHFLRRPRPQ*HLGSEP
Trigger: CGGTTCTGACCCCAGATGGCACTGAGGCCGAGGCCG...CCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGGGCGAGTGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGATGAGGGCGTTCGCGGCCATAGACTTTaGCTCGGCGGGCGTCACCAA +
Preference number: 4 (lower is better)
Translates to: LGRVWSVMSWDGPWDEGVRGHRL*LGGRHQ
Trigger: TTGGTGACGCCCGCCGAGCCAAAGTCTATGGCCGCG...AACGCCCTCATCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCGGGCTGCCGTGGCTGGGTGGATaGAGGCCATGTACGGGCTGT +
Preference number: 4 (lower is better)
Translates to: FRVPAYNTRGPFTSGSGLPWLGG*RPCTGC
Trigger: ACAGCCCGTACATGGCCTTCATCCACCCAGCCACGG...CAGCCCGGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GTGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTCTCGGTGGAGGCCCCTaGGGGGTTGGCAATGTGGGC +
Preference number: 4 (lower is better)
Translates to: VVLSHQAPGCSTFCRVGFLGGGP*GVGNVG
Trigger: GCCCACATTGCCAACCCCTCAGGGGCCTCCACCGAG...AAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGCGTCGGAGGGTGCGATaGCCGGCACCAGGTAGGGGC +
Preference number: 4 (lower is better)
Translates to: CLLQWLVCSTKSSGLHLVRRRVR*PAPGRG
Trigger: GCCCCTACCTGGTGCCGGTCATCGCACCCTCCGACG...CACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TCACCAGAGCGAGGGGACAGGTACTTGAGAGACATGTGGGCCTGGCTGCCACTCACCATCACGTCTCCTTaGCCGGCGCTGATGGTGTCC +
Preference number: 4 (lower is better)
Translates to: SPERGDRYLRDMWAWLPLTITSP*PALMVS
Trigger: GGACACCATCAGCGCCGGGCAAGGAGACGTGATGGT...GAGTGGCAGCCAGGCCCACATGTCTCTCAAGTACCTGTCCCCTCGCTCTGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp ATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGACGGCCTCGGCCTCAGTaGCATCTGGGGTCAGAACCG +
Preference number: 4 (lower is better)
Translates to: MKLAGAGVECYVMGRTLGRPRPQ*HLGSEP
Trigger: CGGTTCTGACCCCAGATGGCACTGAGGCCGAGGCCG...TCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAGCCAACTTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CTGTTGATTTGTCATGCCAACGACTGTGCCTGCACTGCCGTGGTGAGGCCAGGCGCCAACGACTGTGCCTaGACTGCCGTGGTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: LLICHANDCACTAVVRPGANDCA*TAVVRP
Trigger: TGGCCTCACCACGGCAGTGCAGGCACAGTCGTTGGC...GCCTGGCCTCACCACGGCAGTGCAGGCACAGTCGTTGGCATGACAAATCAACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470231.1
CDS-3UTR CCA 90 bp CTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGATGAGGGCGTTGGATGTCCACTTTGCTaGGGCCTTCCACCGCCAAGG +
Preference number: 4 (lower is better)
Translates to: LGRVWSVMSWDGPWDEGVGCPLC*GLPPPR
Trigger: CCTTGGCGGTGGAAGGCCCCAGCAAAGTGGACATCC...AACGCCCTCATCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp ACTGCTGTTGATTTGTCATGCCAACGACTGTGCCTGCACTGCCGTGGTGAGGCCAAATGCTCCCGACAGTaGCCACGGACGGGGCCCGAC +
Preference number: 4 (lower is better)
Translates to: TAVDLSCQRLCLHCRGEAKCSRQ*PRTGPD
Trigger: GTCGGGCCCCGTCCGTGGCCACTGTCGGGAGCATTT...GGCCTCACCACGGCAGTGCAGGCACAGTCGTTGGCATGACAAATCAACAGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470231.1
CDS-3UTR CCA 90 bp CCCAACACTCGCCCCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGTGCACGCCCATCTCCTaGGGCACAAACCGGACGCAG +
Preference number: 4 (lower is better)
Translates to: PNTRPRYYTCHKSGHFLRCTPIS*GTNRTQ
Trigger: CTGCGTCCGGTTTGTGCCCCAGGAGATGGGCGTGCA...CCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGGGCGAGTGTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TACCCCCAACACTCGCCCCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCCTTCACAGGAACCCTaGAGGGGCTGCCGGGGATGT +
Preference number: 4 (lower is better)
Translates to: YPQHSPQILHLPQEWPLPPSQEP*RGCRGC
Trigger: ACATCCCCGGCAGCCCCTTCAGGGTTCCTGTGAAGG...AGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGGGCGAGTGTTGGGGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp ATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGACCCGGGTCCAAATGCTaGACTCAGCTGGGACTCCCG +
Preference number: 4 (lower is better)
Translates to: MKLAGAGVECYVMGRTLGPGSKC*TQLGLP
Trigger: CGGGAGTCCCAGCTGAGTTCAGCATTTGGACCCGGG...TCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAGCCAACTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TACCCCCAACACTCGCCCCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCCGTGGCCAGGCACTTaGTGGCATCACCCGTCTGTG +
Preference number: 4 (lower is better)
Translates to: YPQHSPQILHLPQEWPLPPWPGT*WHHPSV
Trigger: CACAGACGGGTGATGCCAGCAAGTGCCTGGCCACGG...AGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGGGCGAGTGTTGGGGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TTGATTTGTCATGCCAACGACTGTGCCTGCACTGCCGTGGTGAGGCCAGGCGGCGGTTCAGGTCACAAATaGTCCCGACAGTGGCCACGG +
Preference number: 4 (lower is better)
Translates to: LICHANDCACTAVVRPGGGSGHK*SRQWPR
Trigger: CCGTGGCCACTGTCGGGAGCATTTGTGACCTGAACC...GCCGCCTGGCCTCACCACGGCAGTGCAGGCACAGTCGTTGGCATGACAAATCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470231.1
CDS-3UTR GCA 90 bp TGGGACGGACCTTGGGATGAGGGCGTTAATCCATGGGCCCCTCTGAGATCACTTTTGACGCTGACCGTGTaGACGCCCATCTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: WDGPWDEGVNPWAPLRSLLTLTV*TPISWG
Trigger: GCCCCAGGAGATGGGCGTGCACACGGTCAGCGTCAA...AAGTGATCTCAGAGGGGCCCATGGATTAACGCCCTCATCCCAAGGTCCGTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TACCCCCAACACTCGCCCCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTGTAGGCCTCGGCCACTaGCCCGGCAGGCATTTGGAT +
Preference number: 4 (lower is better)
Translates to: YPQHSPQILHLPQEWPLPVGLGH*PGRHLD
Trigger: ATCCAAATGCCTGCCGGGCCAGTGGCCGAGGCCTAC...AGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGGGCGAGTGTTGGGGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TACCCCCAACACTCGCCCCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTTGGTCACCCCCAACCTaGGTCAGCGGCCGAGAGTCA +
Preference number: 4 (lower is better)
Translates to: YPQHSPQILHLPQEWPLPWSPPT*VSGRES
Trigger: TGACTCTCGGCCGCTGACCCAGGTTGGGGGTGACCA...AGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGGGCGAGTGTTGGGGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TCACCAGAGCGAGGGGACAGGTACTTGAGAGACATGTGGGCCTGGCTGCCACTCATGTGGGCCTTGATGTaGTCACCCCCAACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: SPERGDRYLRDMWAWLPLMWALM*SPPTWV
Trigger: GACCCAGGTTGGGGGTGACCACATCAAGGCCCACAT...GAGTGGCAGCCAGGCCCACATGTCTCTCAAGTACCTGTCCCCTCGCTCTGGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTACCCCAAATGCTCCCGACAGTaGCCACGGACGGGGCCCGAC +
Preference number: 4 (lower is better)
Translates to: LSHQAPGCSTFCRVGFYPKCSRQ*PRTGPD
Trigger: GTCGGGCCCCGTCCGTGGCCACTGTCGGGAGCATTT...GGGGTAAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTACCCCTACCACGAAGTCCGCTaGCCGCCCGACAATCCCACC +
Preference number: 4 (lower is better)
Translates to: LSHQAPGCSTFCRVGFYPYHEVR*PPDNPT
Trigger: GGTGGGATTGTCGGGCGGTCAGCGGACTTCGTGGTA...GGGGTAAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTACCCCCCGTGGCTGGGTGGATaGAGGCCATGTACGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LSHQAPGCSTFCRVGFYPPWLGG*RPCTGC
Trigger: ACAGCCCGTACATGGCCTTCATCCACCCAGCCACGG...GGGGTAAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TGGGACGGACCTTGGGATGAGGGCGTTAATCCATGGGCCCCTCTGAGATCACTTCAGGAAGTCAGCGGCTaGGCCCAACTTCACCTGGGA +
Preference number: 4 (lower is better)
Translates to: WDGPWDEGVNPWAPLRSLQEVSG*AQLHLG
Trigger: TCCCAGGTGAAGTTGGGCTCAGCCGCTGACTTCCTG...AAGTGATCTCAGAGGGGCCCATGGATTAACGCCCTCATCCCAAGGTCCGTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CCCAACACTCGCCCCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGCCACTTCCCGGGGGATaGAGGAGATGCCAATGTGGT +
Preference number: 4 (lower is better)
Translates to: PNTRPRYYTCHKSGHFLRPLPGG*RRCQCG
Trigger: ACCACATTGGCATCTCCTTCATCCCCCGGGAAGTGG...CCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGGGCGAGTGTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCGGGCTGAAACCGGACGCAGTGTaGGTTCTTCCCCATGGGCAC +
Preference number: 4 (lower is better)
Translates to: FRVPAYNTRGPFTSGSGLKPDAV*VLPHGH
Trigger: GTGCCCATGGGGAAGAACTCACACTGCGTCCGGTTT...CAGCCCGGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTGGAGCGTGTGCGTCGGAGGGTGCGATaGCCGGCACCAGGTAGGGGC +
Preference number: 4 (lower is better)
Translates to: HFKHFGKTAQADEGLERVRRRVR*PAPGRG
Trigger: GCCCCTACCTGGTGCCGGTCATCGCACCCTCCGACG...CACACGCTCCAGCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp ATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGATGCCACTCTGCCCTCTaGGTTTCTGTAGGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: MKLAGAGVECYVMGRTLGCHSAL*VSVGCP
Trigger: CGGGCACCCTACAGAAACTCAGAGGGCAGAGTGGCA...TCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAGCCAACTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp ATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGAGAGGGGACAGGTACTTaGGAGACATGTGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: MKLAGAGVECYVMGRTLGEGTGT*ETCGPG
Trigger: GCCAGGCCCACATGTCTCTCAAGTACCTGTCCCCTC...TCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAGCCAACTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp ATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGATGGTCAACGTGTACATaGCGGCCGTCAGGGGCACGT +
Preference number: 4 (lower is better)
Translates to: MKLAGAGVECYVMGRTLGWSTCT*RPSGAR
Trigger: ACGTGCCCCTGACGGCCGGCATGTACACGTTGACCA...TCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAGCCAACTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTACCCCTTGACGCTGACCGTGTaGACGCCCATCTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LSHQAPGCSTFCRVGFYPLTLTV*TPISWG
Trigger: GCCCCAGGAGATGGGCGTGCACACGGTCAGCGTCAA...GGGGTAAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TGTTCCTGGTCTGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTGGCGTCGTCGGAGGGTaGGATGACCGGCACCAGGTA +
Preference number: 4 (lower is better)
Translates to: CSWSVCCSGWSVPPRVLVGVVGG*DDRHQV
Trigger: TACCTGGTGCCGGTCATCGCACCCTCCGACGACGCC...AACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACAGACCAGGAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CCCAACACTCGCCCCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGGCCCGGCTGCCACTCTaGCCTCTGAGAAGTGTAAGA +
Preference number: 4 (lower is better)
Translates to: PNTRPRYYTCHKSGHFLRARLPL*PLRSVR
Trigger: TCTTACACTTCTCAGAGGGCAGAGTGGCAGCCGGGC...CCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGGGCGAGTGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp GCTGTTGATTTGTCATGCCAACGACTGTGCCTGCACTGCCGTGGTGAGGCCAGGTCATGCCAACGACTGTaGCTGCACTGCCGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: AVDLSCQRLCLHCRGEARSCQRL*LHCRGE
Trigger: CTCACCACGGCAGTGCAGGCACAGTCGTTGGCATGA...CCTGGCCTCACCACGGCAGTGCAGGCACAGTCGTTGGCATGACAAATCAACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470231.1
CDS-3UTR CCA 90 bp CTGAGAAGTGTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTGGCCCGGCAGGCATTTaGATTGCAGGCTTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: LRSVRRPQSMGVLAMRSGGPAGI*IAGFPN
Trigger: GTTGGGGAAGCCTGCAATCCAAATGCCTGCCGGGCC...ACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTACACTTCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp ATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGAGGATACGGACGCCTTTaGGTTGTAGGCCTCGGCCAC +
Preference number: 4 (lower is better)
Translates to: MKLAGAGVECYVMGRTLGGYGRL*VVGLGH
Trigger: GTGGCCGAGGCCTACAACCCAAAGGCGTCCGTATCC...TCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAGCCAACTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TTTGGCTTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCCCGACAATCCCACCATaGAGCCCAGGGCCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: FGFRVPAYNTRGPFTSGSPTIPP*SPGPQA
Trigger: TGCTTGGGGCCCTGGGCTCCATGGTGGGATTGTCGG...GGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAAGCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGGGACGGACCTTGGGATGAGGGCGTTAATCCATGGGCCCCTCTGAGATCACTTCTTGCTGGGATCTGGTaGCAGCGAGGCCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: WDGPWDEGVNPWAPLRSLLAGIW*QRGLHC
Trigger: ACAGTGGAGGCCTCGCTGCCACCAGATCCCAGCAAG...AAGTGATCTCAGAGGGGCCCATGGATTAACGCCCTCATCCCAAGGTCCGTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCGGGCTGCGGAGCACTCGATTTTaGCCTCGCACGGACCTTCCA +
Preference number: 4 (lower is better)
Translates to: FRVPAYNTRGPFTSGSGLRSTRF*PRTDLP
Trigger: TGGAAGGTCCGTGCGAGGCCAAAATCGAGTGCTCCG...CAGCCCGGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TCTGCCTGCCCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTGTCCACCACGTTCACTaGCTCCACCAAGCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: SACPDHTTHLGSGNVPDTVHHVH*LHQASW
Trigger: CCACGAGGCTTGGTGGAGCCAGTGAACGTGGTGGAC...AGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGGGCAGGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp ATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGATGGCCAGGCACTTGCTaGCATCACCCGTCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: MKLAGAGVECYVMGRTLGWPGTC*HHPSVW
Trigger: CCACACAGACGGGTGATGCCAGCAAGTGCCTGGCCA...TCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAGCCAACTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGATGAGGGCGTTTTGATGTGCATCTCATaGAGCCCGACCTCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: LGRVWSVMSWDGPWDEGVLMCIS*SPTSVG
Trigger: CCCCACTGAGGTCGGGCTCCATGAGATGCACATCAA...AACGCCCTCATCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGGGACGGACCTTGGGATGAGGGCGTTAATCCATGGGCCCCTCTGAGATCACTTCTCGTCTCGGCCAGATaGGGCCTTAATGCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: WDGPWDEGVNPWAPLRSLLVSAR*GLNAGR
Trigger: ACGGCCAGCATTAAGGCCCCATCTGGCCGAGACGAG...AAGTGATCTCAGAGGGGCCCATGGATTAACGCCCTCATCCCAAGGTCCGTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTAAAGCAGTGGGATGTCCACTTTGCTaGGGCCTTCCACCGCCAAGG +
Preference number: 4 (lower is better)
Translates to: VRRPQSMGVLAMRSGKAVGCPLC*GLPPPR
Trigger: CCTTGGCGGTGGAAGGCCCCAGCAAAGTGGACATCC...CACTGCTTTACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TCACCAGAGCGAGGGGACAGGTACTTGAGAGACATGTGGGCCTGGCTGCCACTCGATCTTCACGGTAAATaGGCTCCCAGGCACGTGCTC +
Preference number: 4 (lower is better)
Translates to: SPERGDRYLRDMWAWLPLDLHGK*APRHVL
Trigger: GAGCACGTGCCTGGGAGCCCATTTACCGTGAAGATC...GAGTGGCAGCCAGGCCCACATGTCTCTCAAGTACCTGTCCCCTCGCTCTGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGAAATGCTCCCGACAGTaGCCACGGACGGGGCCCGAC +
Preference number: 4 (lower is better)
Translates to: CLLQWLVCSTKSSGLHLVKCSRQ*PRTGPD
Trigger: GTCGGGCCCCGTCCGTGGCCACTGTCGGGAGCATTT...CACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGACCTCGCAGGGGGTGGTaGGCCCATGGACCCCGATCA +
Preference number: 4 (lower is better)
Translates to: QWLVCSTKSSGLHLVYSGPRRGW*AHGPRS
Trigger: TGATCGGGGTCCATGGGCCCACCACCCCCTGCGAGG...TCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GTTGATTTGTCATGCCAACGACTGTGCCTGCACTGCCGTGGTGAGGCCAGGCGGCAGCCCCACAGGATCTaGGCAGAGCAGTTCATGACT +
Preference number: 4 (lower is better)
Translates to: VDLSCQRLCLHCRGEARRQPHRI*AEQFMT
Trigger: AGTCATGAACTGCTCTGCCCAGATCCTGTGGGGCTG...CCGCCTGGCCTCACCACGGCAGTGCAGGCACAGTCGTTGGCATGACAAATCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470231.1
CDS-3UTR TCA 90 bp TCTGCCTGCCCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTAAGATCTTGACCACGTaGGGGCCAGGCTGCATGGGT +
Preference number: 4 (lower is better)
Translates to: SACPDHTTHLGSGNVPDTKILTT*GPGCMG
Trigger: ACCCATGCAGCCTGGCCCTCACGTGGTCAAGATCTT...AGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGGGCAGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp AGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCCGGCGGGCTCCACCTTaGCCCGGGCGGGGAAGTGTG +
Preference number: 4 (lower is better)
Translates to: SHLLCQMTTKLGVPFFSARRAPP*PGRGSV
Trigger: CACACTTCCCCGCCCGGGTCAAGGTGGAGCCCGCCG...GGCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CCCAACACTCGCCCCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGCTGGTCCAAAGACTTTaGTCCTGCTGGTGTCCACGG +
Preference number: 4 (lower is better)
Translates to: PNTRPRYYTCHKSGHFLRLVQRL*SCWCPR
Trigger: CCGTGGACACCAGCAGGATCAAAGTCTTTGGACCAG...CCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGGGCGAGTGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TGTTCCTGGTCTGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTCGGGGCCGGCAATCTTaGCCTTGCTGGGGTCCACAA +
Preference number: 4 (lower is better)
Translates to: CSWSVCCSGWSVPPRVLVRGRQS*PCWGPQ
Trigger: TTGTGGACCCCAGCAAGGTCAAGATTGCCGGCCCCG...AACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACAGACCAGGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TACCCCCAACACTCGCCCCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCGTCACCCCCGTAGGTaGCTCCAATCATATAGCGCC +
Preference number: 4 (lower is better)
Translates to: YPQHSPQILHLPQEWPLPRHPRR*LQSYSA
Trigger: GGCGCTATATGATTGGAGTCACCTACGGGGGTGACG...AGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGGGCGAGTGTTGGGGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GCCGGGATGGTCTCGTGTGGTGATTCTGCAAGAAATAATCACCAGAGCGAGGGGCAGGAAGTCAGCGGCTaGGCCCAACTTCACCTGGGA +
Preference number: 4 (lower is better)
Translates to: AGMVSCGDSARNNHQSEGQEVSG*AQLHLG
Trigger: TCCCAGGTGAAGTTGGGCTCAGCCGCTGACTTCCTG...CCCCTCGCTCTGGTGATTATTTCTTGCAGAATCACCACACGAGACCATCCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CTGAGAAGTGTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTCCACTTCCCGGGGGATaGAGGAGATGCCAATGTGGT +
Preference number: 4 (lower is better)
Translates to: LRSVRRPQSMGVLAMRSGPLPGG*RRCQCG
Trigger: ACCACATTGGCATCTCCTTCATCCCCCGGGAAGTGG...ACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTACACTTCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp ATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGAAAACCGGACGCAGTGTaGGTTCTTCCCCATGGGCAC +
Preference number: 4 (lower is better)
Translates to: MKLAGAGVECYVMGRTLGKPDAV*VLPHGH
Trigger: GTGCCCATGGGGAAGAACTCACACTGCGTCCGGTTT...TCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAGCCAACTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GCCGGGATGGTCTCGTGTGGTGATTCTGCAAGAAATAATCACCAGAGCGAGGGGGAGGGGACAGGTACTTaGGAGACATGTGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: AGMVSCGDSARNNHQSEGEGTGT*ETCGPG
Trigger: GCCAGGCCCACATGTCTCTCAAGTACCTGTCCCCTC...CCCCTCGCTCTGGTGATTATTTCTTGCAGAATCACCACACGAGACCATCCCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TGTTCCTGGTCTGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTCGTGGGCCTTCACCTTaGTGGGATCTGGTGGCAGCG +
Preference number: 4 (lower is better)
Translates to: CSWSVCCSGWSVPPRVLVRGPSP*WDLVAA
Trigger: CGCTGCCACCAGATCCCAGCAAGGTGAAGGCCCACG...AACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACAGACCAGGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCGGGCTGCCACCGCCAAGGATATaGCACCATAACCTGCATCCC +
Preference number: 4 (lower is better)
Translates to: FRVPAYNTRGPFTSGSGLPPPRI*HHNLHP
Trigger: GGGATGCAGGTTATGGTGGCATATCCTTGGCGGTGG...CAGCCCGGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCGGGCTGCATGGGCACAATCTCTaGCTCAGTCACACGGCCAGA +
Preference number: 4 (lower is better)
Translates to: FRVPAYNTRGPFTSGSGLHGHNL*LSHTAR
Trigger: TCTGGCCGTGTGACTGAGGCAGAGATTGTGCCCATG...CAGCCCGGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGATGAGGGCGTTTGTTCCTGGTCTGTCTaGTGCAGTGGCTGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: LGRVWSVMSWDGPWDEGVCSWSV*CSGWSV
Trigger: AACAGACCAGCCACTGCAGCAGACAGACCAGGAACA...AACGCCCTCATCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TCTGCCTGCCCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTGCCCGGCTGCCACTCTaGCCTCTGAGAAGTGTAAGA +
Preference number: 4 (lower is better)
Translates to: SACPDHTTHLGSGNVPDTARLPL*PLRSVR
Trigger: TCTTACACTTCTCAGAGGGCAGAGTGGCAGCCGGGC...AGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGGGCAGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGCCTCCCGTGGCTGGGTaGATGAAGGCCATGTACGGG +
Preference number: 4 (lower is better)
Translates to: CLLQWLVCSTKSSGLHLVPPVAG*MKAMYG
Trigger: CCCGTACATGGCCTTCATCCACCCAGCCACGGGAGG...CACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGGGGCCTTCACCTTGCTaGGATCTGGTGGCAGCGAGG +
Preference number: 4 (lower is better)
Translates to: CLLQWLVCSTKSSGLHLVGPSPC*DLVAAR
Trigger: CCTCGCTGCCACCAGATCCCAGCAAGGTGAAGGCCC...CACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CTGAGAAGTGTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTCGGAGCACTCGATTTTaGCCTCGCACGGACCTTCCA +
Preference number: 4 (lower is better)
Translates to: LRSVRRPQSMGVLAMRSGRSTRF*PRTDLP
Trigger: TGGAAGGTCCGTGCGAGGCCAAAATCGAGTGCTCCG...ACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTACACTTCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp ATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGAATGTGGGCCTTGATGTaGTCACCCCCAACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: MKLAGAGVECYVMGRTLGMWALM*SPPTWV
Trigger: GACCCAGGTTGGGGGTGACCACATCAAGGCCCACAT...TCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAGCCAACTTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGGGACGGACCTTGGGATGAGGGCGTTAATCCATGGGCCCCTCTGAGATCACTTATGTGGGCCTTGATGTaGTCACCCCCAACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: WDGPWDEGVNPWAPLRSLMWALM*SPPTWV
Trigger: GACCCAGGTTGGGGGTGACCACATCAAGGCCCACAT...AAGTGATCTCAGAGGGGCCCATGGATTAACGCCCTCATCCCAAGGTCCGTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TACCCCCAACACTCGCCCCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTGGCTTGCACCCTAGATaGCTGGCAGCCTTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: YPQHSPQILHLPQEWPLPGLHPR*LAAFSD
Trigger: GTCACTGAAGGCTGCCAGCCATCTAGGGTGCAAGCC...AGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGGGCGAGTGTTGGGGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TACCCCCAACACTCGCCCCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTGGGCTGCCGGGGATGTaGGCTCCTCCATATGTGATA +
Preference number: 4 (lower is better)
Translates to: YPQHSPQILHLPQEWPLPGLPGM*APPYVI
Trigger: TATCACATATGGAGGAGCCCACATCCCCGGCAGCCC...AGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGGGCGAGTGTTGGGGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CTGAGAAGTGTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTGGGCTGCCGGGGATGTaGGCTCCTCCATATGTGATA +
Preference number: 4 (lower is better)
Translates to: LRSVRRPQSMGVLAMRSGGLPGM*APPYVI
Trigger: TATCACATATGGAGGAGCCCACATCCCCGGCAGCCC...ACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTACACTTCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGGGACGGACCTTGGGATGAGGGCGTTAATCCATGGGCCCCTCTGAGATCACTTGGGCTGCCGGGGATGTaGGCTCCTCCATATGTGATA +
Preference number: 4 (lower is better)
Translates to: WDGPWDEGVNPWAPLRSLGLPGM*APPYVI
Trigger: TATCACATATGGAGGAGCCCACATCCCCGGCAGCCC...AAGTGATCTCAGAGGGGCCCATGGATTAACGCCCTCATCCCAAGGTCCGTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TTTGGCTTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCCTCCACCAAGCCTCGTaGGCCCAGAACCCTCACTTC +
Preference number: 4 (lower is better)
Translates to: FGFRVPAYNTRGPFTSGSLHQAS*AQNPHF
Trigger: GAAGTGAGGGTTCTGGGCCCACGAGGCTTGGTGGAG...GGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAAGCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TCACCAGAGCGAGGGGACAGGTACTTGAGAGACATGTGGGCCTGGCTGCCACTCGCGATAAGGAGAAAGTaGGATGTCGTCACCCCCGTA +
Preference number: 4 (lower is better)
Translates to: SPERGDRYLRDMWAWLPLAIRRK*DVVTPV
Trigger: TACGGGGGTGACGACATCCCACTTTCTCCTTATCGC...GAGTGGCAGCCAGGCCCACATGTCTCTCAAGTACCTGTCCCCTCGCTCTGGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTACCCCTGGCCAGGCACTTGCTaGCATCACCCGTCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: LSHQAPGCSTFCRVGFYPWPGTC*HHPSVW
Trigger: CCACACAGACGGGTGATGCCAGCAAGTGCCTGGCCA...GGGGTAAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCCAACACTCGCCCCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGCACGTAGAACTGGAGTaGGCTCTCAGGGATGTGGCT +
Preference number: 4 (lower is better)
Translates to: PNTRPRYYTCHKSGHFLRHVELE*ALRDVA
Trigger: AGCCACATCCCTGAGAGCCCACTCCAGTTCTACGTG...CCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGGGCGAGTGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TCACCAGAGCGAGGGGACAGGTACTTGAGAGACATGTGGGCCTGGCTGCCACTCTGCCAATGTGGTTGTTaGGCAGCCTCTTCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: SPERGDRYLRDMWAWLPLCQCGC*AASSGD
Trigger: GTCTCCTGAAGAGGCTGCCCAACAACCACATTGGCA...GAGTGGCAGCCAGGCCCACATGTCTCTCAAGTACCTGTCCCCTCGCTCTGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTTGCACGCCCATCTCCTaGGGCACAAACCGGACGCAG +
Preference number: 4 (lower is better)
Translates to: WSFHIRLRAVPLSVGWAFCTPIS*GTNRTQ
Trigger: CTGCGTCCGGTTTGTGCCCCAGGAGATGGGCGTGCA...AAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TACCCCCAACACTCGCCCCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTGGGCTAACTAGACGCTaGCCTGTCACCTTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: YPQHSPQILHLPQEWPLPGLTRR*PVTLAL
Trigger: CAAGGCCAAGGTGACAGGCCAGCGTCTAGTTAGCCC...AGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGGGCGAGTGTTGGGGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTAAAGCAGTGGGGCTAACTAGACGCTaGCCTGTCACCTTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: VRRPQSMGVLAMRSGKAVGLTRR*PVTLAL
Trigger: CAAGGCCAAGGTGACAGGCCAGCGTCTAGTTAGCCC...CACTGCTTTACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGATGAGGGCGTTAGGATGCCTTGGGAATaGCGCTATAGCAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: LGRVWSVMSWDGPWDEGVRMPWE*RYSRSL
Trigger: CAGAGACCTGCTATAGCGCCATTCCCAAGGCATCCT...AACGCCCTCATCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TCACCAGAGCGAGGGGACAGGTACTTGAGAGACATGTGGGCCTGGCTGCCACTCCGATCAGCAGCATGTTaGAGCCAGCTTTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: SPERGDRYLRDMWAWLPLRSAAC*SQLCCS
Trigger: ACTGCAGCAAAGCTGGCTCCAACATGCTGCTGATCG...GAGTGGCAGCCAGGCCCACATGTCTCTCAAGTACCTGTCCCCTCGCTCTGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCGGGCTGGGGATCTTTGGCAAGTaGGAAACTGCTCGCCACTGC +
Preference number: 4 (lower is better)
Translates to: FRVPAYNTRGPFTSGSGLGIFGK*ETARHC
Trigger: GCAGTGGCGAGCAGTTTCCCACTTGCCAAAGATCCC...CAGCCCGGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp ATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGACTTTGTGTAGCCCGGTaGCCTTGGGCAGATACTCCA +
Preference number: 4 (lower is better)
Translates to: MKLAGAGVECYVMGRTLGLCVAR*PWADTP
Trigger: TGGAGTATCTGCCCAAGGTCACCGGGCTACACAAAG...TCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAGCCAACTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CTGAGAAGTGTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTCTTTGTGTAGCCCGGTaGCCTTGGGCAGATACTCCA +
Preference number: 4 (lower is better)
Translates to: LRSVRRPQSMGVLAMRSGLCVAR*PWADTP
Trigger: TGGAGTATCTGCCCAAGGTCACCGGGCTACACAAAG...ACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTACACTTCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CCAGAAAAAGTGACCCATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATCCGTGGCTGGGTGGATaGAGGCCATGTACGGGCTGT +
Preference number: 4 (lower is better)
Translates to: PEKVTHEVGWGGCGVLCHPWLGG*RPCTGC
Trigger: ACAGCCCGTACATGGCCTTCATCCACCCAGCCACGG...ATGACATAACACTCCACACCCGCCCCAGCCAACTTCATGGGTCACTTTTTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CTGAGAAGTGTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTCTTCACCGGGGTGTATaGGCATGCATATGTGCCGTC +
Preference number: 4 (lower is better)
Translates to: LRSVRRPQSMGVLAMRSGLHRGV*ACICAV
Trigger: GACGGCACATATGCATGCTCATACACCCCGGTGAAG...ACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTACACTTCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GTGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTCAGCAATGGTGTGCTTaGTGGCCTTCACCGGGGTGT +
Preference number: 4 (lower is better)
Translates to: VVLSHQAPGCSTFCRVGFQQWCA*WPSPGC
Trigger: ACACCCCGGTGAAGGCCATCAAGCACACCATTGCTG...AAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TTTGGCTTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCCAGCAATGGTGTGCTTaGTGGCCTTCACCGGGGTGT +
Preference number: 4 (lower is better)
Translates to: FGFRVPAYNTRGPFTSGSQQWCA*WPSPGC
Trigger: ACACCCCGGTGAAGGCCATCAAGCACACCATTGCTG...GGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAAGCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGATGAGGGCGTTCTGGCGGGGATTTCCTaGGATGCAAAGAGAACTTTG +
Preference number: 4 (lower is better)
Translates to: LGRVWSVMSWDGPWDEGVLAGIS*DAKRTL
Trigger: CAAAGTTCTCTTTGCATCTCAGGAAATCCCCGCCAG...AACGCCCTCATCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCGGGCTGCCTTGGTGTAGACAGTaGAGTGGGTCGGTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: FRVPAYNTRGPFTSGSGLPWCRQ*SGSVSH
Trigger: ATGGGAAACCGACCCACTTCACTGTCTACACCAAGG...CAGCCCGGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TCACCAGAGCGAGGGGACAGGTACTTGAGAGACATGTGGGCCTGGCTGCCACTCCTTCAAAGAGGATGTTaGCGAAGTACTCCCCGGGTT +
Preference number: 4 (lower is better)
Translates to: SPERGDRYLRDMWAWLPLLQRGC*RSTPRV
Trigger: AACCCGGGGAGTACTTCGTCAACATCCTCTTTGAAG...GAGTGGCAGCCAGGCCCACATGTCTCTCAAGTACCTGTCCCCTCGCTCTGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACACAGCTCTCGGTGGAGGCCCCTaGGGGGTTGGCAATGTGGGC +
Preference number: 4 (lower is better)
Translates to: EGRQNSLHLISGFLHHTALGGGP*GVGNVG
Trigger: GCCCACATTGCCAACCCCTCAGGGGCCTCCACCGAG...AGCTGTGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CTGAGAAGTGTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTCATCCGCATTGTCTGTaGCAAAGCACTCGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LRSVRRPQSMGVLAMRSGHPHCL*QSTRWR
Trigger: CCTCCACCGAGTGCTTTGTCACAGACAATGCGGATG...ACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTACACTTCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAACGGGGCCGGCAATCTTaGCCTTGCTGGGGTCCACAA +
Preference number: 4 (lower is better)
Translates to: PDTTPATRVATSSGLSSKRGRQS*PCWGPQ
Trigger: TTGTGGACCCCAGCAAGGTCAAGATTGCCGGCCCCG...TTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAACGGTCACCCAGGGCCTaGATCCAGGGGGACATGCAT +
Preference number: 4 (lower is better)
Translates to: PDTTPATRVATSSGLSSKRSPRA*IQGDMH
Trigger: ATGCATGTCCCCCTGGATTCAGGCCCTGGGTGACCG...TTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295956.9
CDS-3UTR TCA 90 bp GGAAACTGCTCGCCACTGCAGAATTTCTTCAGACCAAGGAAGGGACTGAAACGGGAAAGTCCGGCCTTCTaGCAGGCCGCGGCCATAGAC +
Preference number: 4 (lower is better)
Translates to: GNCSPLQNFFRPRKGLKRESPAF*QAAAID
Trigger: GTCTATGGCCGCGGCCTGTCAGAAGGCCGGACTTTC...CCGTTTCAGTCCCTTCCTTGGTCTGAAGAAATTCTGCAGTGGCGAGCAGTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TCACCAGAGCGAGGGGACAGGTACTTGAGAGACATGTGGGCCTGGCTGCCACTCCCCTTGTGTCCACGATaGAGTCAGACATCTCGAAAG +
Preference number: 4 (lower is better)
Translates to: SPERGDRYLRDMWAWLPLPLCPR*SQTSRK
Trigger: CTTTCGAGATGTCTGACTTCATCGTGGACACAAGGG...GAGTGGCAGCCAGGCCCACATGTCTCTCAAGTACCTGTCCCCTCGCTCTGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACGGCCAGAGGGGCTGGTaGCGTGGGCCGACATATCAC +
Preference number: 4 (lower is better)
Translates to: GLQEGRQNSLHLISGFLHGQRGW*RGPTYH
Trigger: GTGATATGTCGGCCCACGTCACCAGCCCCTCTGGCC...GTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CTGAGAAGTGTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTTGGGCTCGATTCCTCTaGCATAGGCCCTGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LRSVRRPQSMGVLAMRSGWARFL*HRPWLS
Trigger: AGAAAGCCAGGGCCTATGGCAGAGGAATCGAGCCCA...ACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTACACTTCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CTGAGAAGTGTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTCAAGCACGGACTTTCTaGATACCCGCTTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: LRSVRRPQSMGVLAMRSGQARTF*IPASGP
Trigger: TGGCCCTGAAGCGGGTATGCAGAAAGTCCGTGCTTG...ACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTACACTTCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CTGAGAAGTGTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTACCACAGCAATGGTGTaGTTGATGGCCTTCACCGGG +
Preference number: 4 (lower is better)
Translates to: LRSVRRPQSMGVLAMRSGTTAMV*LMAFTG
Trigger: CCCGGTGAAGGCCATCAAGCACACCATTGCTGTGGT...ACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTACACTTCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAATCACCCACCTTCCCGTaGTCGAGACCTGGCCCCGAT +
Preference number: 4 (lower is better)
Translates to: PDTTPATRVATSSGLSSKSPTFP*SRPGPD
Trigger: ATCGGGGCCAGGTCTCGAGCACGGGAAGGTGGGTGA...TTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCGGGCTGACTCAGCACTGCAGCTaGCATCCTTGTTGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: FRVPAYNTRGPFTSGSGLTQHCS*HPCCLC
Trigger: GCAGAGACAACAAGGATGGCAGCTGCAGTGCTGAGT...CAGCCCGGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGATCCACCGTGAAGGACTaGAGGACACGGGCTCGGACG +
Preference number: 4 (lower is better)
Translates to: QWLVCSTKSSGLHLVYSGSTVKD*RTRART
Trigger: CGTCCGAGCCCGTGTCCTGCAGTCCTTCACGGTGGA...TCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TCCCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACACGGCCTCGGCCTCAGTaGCATCTGGGGTCAGAACCG +
Preference number: 4 (lower is better)
Translates to: SQLSGQRPAGVSFCPVCTRPRPQ*HLGSEP
Trigger: CGGTTCTGACCCCAGATGGCACTGAGGCCGAGGCCG...TGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TCACCAGAGCGAGGGGACAGGTACTTGAGAGACATGTGGGCCTGGCTGCCACTCGAGGCCTGGACCGTATaGAGAAACACTTCCACTGTT +
Preference number: 4 (lower is better)
Translates to: SPERGDRYLRDMWAWLPLEAWTV*RNTSTV
Trigger: AACAGTGGAAGTGTTTCTGCATACGGTCCAGGCCTC...GAGTGGCAGCCAGGCCCACATGTCTCTCAAGTACCTGTCCCCTCGCTCTGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TCTGCCTGCCCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTCCACCGCCAAGGATATaGCACCATAACCTGCATCCC +
Preference number: 4 (lower is better)
Translates to: SACPDHTTHLGSGNVPDTPPPRI*HHNLHP
Trigger: GGGATGCAGGTTATGGTGGCATATCCTTGGCGGTGG...AGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGGGCAGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp ATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGACATGGGCACAATCTCTaGCTCAGTCACACGGCCAGA +
Preference number: 4 (lower is better)
Translates to: MKLAGAGVECYVMGRTLGHGHNL*LSHTAR
Trigger: TCTGGCCGTGTGACTGAGGCAGAGATTGTGCCCATG...TCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAGCCAACTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp GCCGGGATGGTCTCGTGTGGTGATTCTGCAAGAAATAATCACCAGAGCGAGGGGGCCCGGCTGCCACTCTaGCCTCTGAGAAGTGTAAGA +
Preference number: 4 (lower is better)
Translates to: AGMVSCGDSARNNHQSEGARLPL*PLRSVR
Trigger: TCTTACACTTCTCAGAGGGCAGAGTGGCAGCCGGGC...CCCCTCGCTCTGGTGATTATTTCTTGCAGAATCACCACACGAGACCATCCCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TCTGCCTGCCCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTACGGTGTTCTTCCCCTaGGGATCTTCCACCTCCACA +
Preference number: 4 (lower is better)
Translates to: SACPDHTTHLGSGNVPDTTVFFP*GSSTST
Trigger: TGTGGAGGTGGAAGATCCCCAGGGGAAGAACACCGT...AGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGGGCAGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTAAAGCAGTGACGGTGTTCTTCCCCTaGGGATCTTCCACCTCCACA +
Preference number: 4 (lower is better)
Translates to: VRRPQSMGVLAMRSGKAVTVFFP*GSSTST
Trigger: TGTGGAGGTGGAAGATCCCCAGGGGAAGAACACCGT...CACTGCTTTACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGGGACGGACCTTGGGATGAGGGCGTTAATCCATGGGCCCCTCTGAGATCACTTATCTCCCCGGGGTGCTaGGGTAATACTCGAATGCGT +
Preference number: 4 (lower is better)
Translates to: WDGPWDEGVNPWAPLRSLISPGC*GNTRMR
Trigger: ACGCATTCGAGTATTACCCCAGCACCCCGGGGAGAT...AAGTGATCTCAGAGGGGCCCATGGATTAACGCCCTCATCCCAAGGTCCGTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGACCGACAATCCCACCATaGAGCCCAGGGCCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: QWLVCSTKSSGLHLVYSGPTIPP*SPGPQA
Trigger: TGCTTGGGGCCCTGGGCTCCATGGTGGGATTGTCGG...TCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCAGAAAAAGTGACCCATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATCCGACAATCCCACCATaGAGCCCAGGGCCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: PEKVTHEVGWGGCGVLCHPTIPP*SPGPQA
Trigger: TGCTTGGGGCCCTGGGCTCCATGGTGGGATTGTCGG...ATGACATAACACTCCACACCCGCCCCAGCCAACTTCATGGGTCACTTTTTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCCAACACTCGCCCCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGTGCTTTGCTGAGCCCTaGGCCTTCTGCCTTCACTTT +
Preference number: 4 (lower is better)
Translates to: PNTRPRYYTCHKSGHFLRCFAEP*AFCLHF
Trigger: AAAGTGAAGGCAGAAGGCCCAGGGCTCAGCAAAGCA...CCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGGGCGAGTGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GGAAACTGCTCGCCACTGCAGAATTTCTTCAGACCAAGGAAGGGACTGAAACGGCACCTTGCTGGGATCTaGTGGCAGCGAGGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: GNCSPLQNFFRPRKGLKRHLAGI*WQRGLH
Trigger: GTGGAGGCCTCGCTGCCACCAGATCCCAGCAAGGTG...CCGTTTCAGTCCCTTCCTTGGTCTGAAGAAATTCTGCAGTGGCGAGCAGTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGAGGGCCTTCACCTTGCTaGGATCTGGTGGCAGCGAGG +
Preference number: 4 (lower is better)
Translates to: QWLVCSTKSSGLHLVYSGGPSPC*DLVAAR
Trigger: CCTCGCTGCCACCAGATCCCAGCAAGGTGAAGGCCC...TCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTACCCCCGGAGCACTCGATTTTaGCCTCGCACGGACCTTCCA +
Preference number: 4 (lower is better)
Translates to: LSHQAPGCSTFCRVGFYPRSTRF*PRTDLP
Trigger: TGGAAGGTCCGTGCGAGGCCAAAATCGAGTGCTCCG...GGGGTAAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCAGAAAAAGTGACCCATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATCCCGTGCTCGAGACCTaGCCCCGATGCCACGACTTT +
Preference number: 4 (lower is better)
Translates to: PEKVTHEVGWGGCGVLCHPVLET*PRCHDF
Trigger: AAAGTCGTGGCATCGGGGCCAGGTCTCGAGCACGGG...ATGACATAACACTCCACACCCGCCCCAGCCAACTTCATGGGTCACTTTTTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTACCCCGGCTTGCACCCTAGATaGCTGGCAGCCTTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: LSHQAPGCSTFCRVGFYPGLHPR*LAAFSD
Trigger: GTCACTGAAGGCTGCCAGCCATCTAGGGTGCAAGCC...GGGGTAAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGGTCCACCACGTTCACTaGCTCCACCAAGCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: CLLQWLVCSTKSSGLHLVVHHVH*LHQASW
Trigger: CCACGAGGCTTGGTGGAGCCAGTGAACGTGGTGGAC...CACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCGGGCTGGCGATAAGGAGAAAGTaGGATGTCGTCACCCCCGTA +
Preference number: 4 (lower is better)
Translates to: FRVPAYNTRGPFTSGSGLAIRRK*DVVTPV
Trigger: TACGGGGGTGACGACATCCCACTTTCTCCTTATCGC...CAGCCCGGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CTGAGAAGTGTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTTTGATGTGCATCTCATaGAGCCCGACCTCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: LRSVRRPQSMGVLAMRSGLMCIS*SPTSVG
Trigger: CCCCACTGAGGTCGGGCTCCATGAGATGCACATCAA...ACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTACACTTCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGTTCCTGGTCTGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTCTCGTCTCGGCCAGATaGGGCCTTAATGCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: CSWSVCCSGWSVPPRVLVLVSAR*GLNAGR
Trigger: ACGGCCAGCATTAAGGCCCCATCTGGCCGAGACGAG...AACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACAGACCAGGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCACGCGGCCATAGACTTTaGCTCGGCGGGCGTCACCAA +
Preference number: 4 (lower is better)
Translates to: PDHTTHLGSGNVPDTLTSRGHRL*LGGRHQ
Trigger: TTGGTGACGCCCGCCGAGCCAAAGTCTATGGCCGCG...TGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TTTGGCTTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCGGGCTAACTAGACGCTaGCCTGTCACCTTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: FGFRVPAYNTRGPFTSGSGLTRR*PVTLAL
Trigger: CAAGGCCAAGGTGACAGGCCAGCGTCTAGTTAGCCC...GGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAAGCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TCTGCCTGCCCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTCTGACTCCACCAGGATaGATGAGGTCTCGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: SACPDHTTHLGSGNVPDTLTPPG*MRSRWL
Trigger: CAGCCAACGAGACCTCATCCATCCTGGTGGAGTCAG...AGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGGGCAGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTACCCCCGTCCGAGGATGCCTTaGGAATGGCGCTATAGCAGG +
Preference number: 4 (lower is better)
Translates to: LSHQAPGCSTFCRVGFYPRPRMP*EWRYSR
Trigger: CCTGCTATAGCGCCATTCCCAAGGCATCCTCGGACG...GGGGTAAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCCTCTGAGATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCCCTCGCAGGGGGTGGTaGGCCCATGGACCCCGATCA +
Preference number: 4 (lower is better)
Translates to: PSEITLNILVRLPRLMKGPRRGW*AHGPRS
Trigger: TGATCGGGGTCCATGGGCCCACCACCCCCTGCGAGG...GCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGATCTCAGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACACCTCGCAGGGGGTGGTaGGCCCATGGACCCCGATCA +
Preference number: 4 (lower is better)
Translates to: CRKAGKIPYTSFLDFCTTPRRGW*AHGPRS
Trigger: TGATCGGGGTCCATGGGCCCACCACCCCCTGCGAGG...TGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TCTGCCTGCCCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTGTCTGTCTGCTGCAGTaGCTGGTCTGTTCCACCAAG +
Preference number: 4 (lower is better)
Translates to: SACPDHTTHLGSGNVPDTVCLLQ*LVCSTK
Trigger: CTTGGTGGAACAGACCAGCCACTGCAGCAGACAGAC...AGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGGGCAGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTGGAGCGTGTGTACCACGAAGTCCGCTaGCCGCCCGACAATCCCACC +
Preference number: 4 (lower is better)
Translates to: HFKHFGKTAQADEGLERVYHEVR*PPDNPT
Trigger: GGTGGGATTGTCGGGCGGTCAGCGGACTTCGTGGTA...CACACGCTCCAGCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATACCACGAAGTCCGCTaGCCGCCCGACAATCCCACC +
Preference number: 4 (lower is better)
Translates to: PTFRPKTRRSFILSCLYRYHEVR*PPDNPT
Trigger: GGTGGGATTGTCGGGCGGTCAGCGGACTTCGTGGTA...TCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGATGAGGGCGTTCTTCGTCGTCACACATaGTGTGAACAGCATATTCGC +
Preference number: 4 (lower is better)
Translates to: LGRVWSVMSWDGPWDEGVLRRHT*CEQHIR
Trigger: GCGAATATGCTGTTCACATCATGTGTGACGACGAAG...AACGCCCTCATCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CCCAACACTCGCCCCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGCTGGCGGGGATTTCCTaGGATGCAAAGAGAACTTTG +
Preference number: 4 (lower is better)
Translates to: PNTRPRYYTCHKSGHFLRLAGIS*DAKRTL
Trigger: CAAAGTTCTCTTTGCATCTCAGGAAATCCCCGCCAG...CCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGGGCGAGTGTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GGAAACTGCTCGCCACTGCAGAATTTCTTCAGACCAAGGAAGGGACTGAAACGGCCTTCCGAGAGGGGCTaGGGATTGTCACGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GNCSPLQNFFRPRKGLKRPSERG*GLSRPA
Trigger: AGCTGGACGTGACAATCCTCAGCCCCTCTCGGAAGG...CCGTTTCAGTCCCTTCCTTGGTCTGAAGAAATTCTGCAGTGGCGAGCAGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TTTGGCTTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCCTGGTCCAAAGACTTTaGTCCTGCTGGTGTCCACGG +
Preference number: 4 (lower is better)
Translates to: FGFRVPAYNTRGPFTSGSLVQRL*SCWCPR
Trigger: CCGTGGACACCAGCAGGATCAAAGTCTTTGGACCAG...GGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAAGCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GTGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTCATCCGCATTGTCTGTaGCAAAGCACTCGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: VVLSHQAPGCSTFCRVGFHPHCL*QSTRWR
Trigger: CCTCCACCGAGTGCTTTGTCACAGACAATGCGGATG...AAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCCCTTCACAGGAACCCTaGAGGGGCTGCCGGGGATGT +
Preference number: 4 (lower is better)
Translates to: AQVCRKAGKIPYTSFLDFPSQEP*RGCRGC
Trigger: ACATCCCCGGCAGCCCCTTCAGGGTTCCTGTGAAGG...GAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TCCCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACATGCTGCTGTCCACCGTaGAGGACTGCAGGACACGGG +
Preference number: 4 (lower is better)
Translates to: SQLSGQRPAGVSFCPVCTCCCPP*RTAGHG
Trigger: CCCGTGTCCTGCAGTCCTTCACGGTGGACAGCAGCA...TGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTAAAGCAGTGGGCTGCCCATGTATTTaGTGTGCATCTCATGGAGCC +
Preference number: 4 (lower is better)
Translates to: VRRPQSMGVLAMRSGKAVGCPCI*CASHGA
Trigger: GGCTCCATGAGATGCACATCAAATACATGGGCAGCC...CACTGCTTTACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCGAAAGTCCGGCCTTCTaGCAGGCCGCGGCCATAGAC +
Preference number: 4 (lower is better)
Translates to: AQVCRKAGKIPYTSFLDFESPAF*QAAAID
Trigger: GTCTATGGCCGCGGCCTGTCAGAAGGCCGGACTTTC...GAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAAACCTACCCGGGTCCAAATGCTaGACTCAGCTGGGACTCCCG +
Preference number: 4 (lower is better)
Translates to: YYTCHKSGHFLRTKQQNLPGSKC*TQLGLP
Trigger: CGGGAGTCCCAGCTGAGTTCAGCATTTGGACCCGGG...TAGGTTTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp AAGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCGTCGGAGGGTGCGATaGCCGGCACCAGGTAGGGGC +
Preference number: 4 (lower is better)
Translates to: KSSPLPNDNQTRCPLFLCRRRVR*PAPGRG
Trigger: GCCCCTACCTGGTGCCGGTCATCGCACCCTCCGACG...GCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTACCCCATGGGCCTTCGATGGTaGCGGATAATGTCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: LSHQAPGCSTFCRVGFYPMGLRW*RIMSLD
Trigger: GTCCAGGGACATTATCCGTCACCATCGAAGGCCCAT...GGGGTAAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TCTGCCTGCCCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTCCATGGGGGTGTACATaGCTTTGTACCCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: SACPDHTTHLGSGNVPDTPWGCT*LCTLQV
Trigger: CACCTGAAGGGTACAAAGTCATGTACACCCCCATGG...AGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGGGCAGGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTAAAGCAGTGCCATGGGGGTGTACATaGCTTTGTACCCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: VRRPQSMGVLAMRSGKAVPWGCT*LCTLQV
Trigger: CACCTGAAGGGTACAAAGTCATGTACACCCCCATGG...CACTGCTTTACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCATGGGGGTGTTGGCGATaGGGAGCGGTAAAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: PDHTTHLGSGNVPDTLTSWGCWR*GAVKQC
Trigger: GCACTGCTTTACCGCTCCTCATCGCCAACACCCCCA...TGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGAGAGGGGACAGGTACTTaGGAGACATGTGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: QWLVCSTKSSGLHLVYSGEGTGT*ETCGPG
Trigger: GCCAGGCCCACATGTCTCTCAAGTACCTGTCCCCTC...TCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TCACCAGAGCGAGGGGACAGGTACTTGAGAGACATGTGGGCCTGGCTGCCACTCCAACCCTGGACCTTTTaGAGTGACTTTACTGGCATC +
Preference number: 4 (lower is better)
Translates to: SPERGDRYLRDMWAWLPLQPWTF*SDFTGI
Trigger: GATGCCAGTAAAGTCACTGCAAAAGGTCCAGGGTTG...GAGTGGCAGCCAGGCCCACATGTCTCTCAAGTACCTGTCCCCTCGCTCTGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGATGAGGGCGTTTCCAGAAAGTCTTTCTaGTTCACCAGCTCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: LGRVWSVMSWDGPWDEGVSRKSF*FTSSSR
Trigger: TCTGGAGGAGCTGGTGAAGCAGAAAGACTTTCTGGA...AACGCCCTCATCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGATGAGGGCGTTGGGGTAATACTCGAATaGGTAGACCCCATCCAGAAA +
Preference number: 4 (lower is better)
Translates to: LGRVWSVMSWDGPWDEGVGVILE*VDPIQK
Trigger: TTTCTGGATGGGGTCTACGCATTCGAGTATTACCCC...AACGCCCTCATCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp GCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGATCTTCTCACCCACCTTCCCGTaGTCGAGACCTGGCCCCGAT +
Preference number: 4 (lower is better)
Translates to: AGLFHQEFWFAPSVLRIFSPTFP*SRPGPD
Trigger: ATCGGGGCCAGGTCTCGAGCACGGGAAGGTGGGTGA...GAAGATCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTACCCCAAGCCCACCAATTCCTaGGCCTCTGGTAACCACGGT +
Preference number: 4 (lower is better)
Translates to: LSHQAPGCSTFCRVGFYPKPTNS*ASGNHG
Trigger: ACCGTGGTTACCAGAGGCGCAGGAATTGGTGGGCTT...GGGGTAAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAAACCTACCGTGGCCAGGCACTTaGTGGCATCACCCGTCTGTG +
Preference number: 4 (lower is better)
Translates to: YYTCHKSGHFLRTKQQNLPWPGT*WHHPSV
Trigger: CACAGACGGGTGATGCCAGCAAGTGCCTGGCCACGG...TAGGTTTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGATGAGGGCGTTTATGCCACCATAACCTaGATCCCTTGTGTCCACGAT +
Preference number: 4 (lower is better)
Translates to: LGRVWSVMSWDGPWDEGVYATIT*IPCVHD
Trigger: ATCGTGGACACAAGGGATGCAGGTTATGGTGGCATA...AACGCCCTCATCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CCAGAAAAAGTGACCCATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATGGGCTCCCAGGCACGTaGTCGTCAGCGAATTTGGTG +
Preference number: 4 (lower is better)
Translates to: PEKVTHEVGWGGCGVLCHGLPGT*SSANLV
Trigger: CACCAAATTCGCTGACGAGCACGTGCCTGGGAGCCC...ATGACATAACACTCCACACCCGCCCCAGCCAACTTCATGGGTCACTTTTTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp ACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCATTCCAAAGCGGCGTCGTCGGAGGGTaGGATGACCGGCACCAGGTA +
Preference number: 4 (lower is better)
Translates to: TTHLGSGNVPDTLTSFQSGVVGG*DDRHQV
Trigger: TACCTGGTGCCGGTCATCGCACCCTCCGACGACGCC...GCTTTGGAATGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp ATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGAGCTCCAGAGGGGCTGTaGACCTTTGCATCAATCTTG +
Preference number: 4 (lower is better)
Translates to: MKLAGAGVECYVMGRTLGAPEGL*TFASIL
Trigger: CAAGATTGATGCAAAGGTGCACAGCCCCTCTGGAGC...TCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAGCCAACTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTGCTGGCGTCCGAGGATaGCTTGGGAATGGCGCTATA +
Preference number: 4 (lower is better)
Translates to: WSFHIRLRAVPLSVGWAFAGVRG*LGNGAI
Trigger: TATAGCGCCATTCCCAAGGCATCCTCGGACGCCAGC...AAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GGAAACTGCTCGCCACTGCAGAATTTCTTCAGACCAAGGAAGGGACTGAAACGGGGATACGGACGCCTTTaGGTTGTAGGCCTCGGCCAC +
Preference number: 4 (lower is better)
Translates to: GNCSPLQNFFRPRKGLKRGYGRL*VVGLGH
Trigger: GTGGCCGAGGCCTACAACCCAAAGGCGTCCGTATCC...CCGTTTCAGTCCCTTCCTTGGTCTGAAGAAATTCTGCAGTGGCGAGCAGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TTTGGCTTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCATCTCCCCGGGGTGCTaGGGTAATACTCGAATGCGT +
Preference number: 4 (lower is better)
Translates to: FGFRVPAYNTRGPFTSGSISPGC*GNTRMR
Trigger: ACGCATTCGAGTATTACCCCAGCACCCCGGGGAGAT...GGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAAGCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGATGAGGGCGTTGGAGACCCAGGTATGTaGACTTCTTCAAAGAGGATG +
Preference number: 4 (lower is better)
Translates to: LGRVWSVMSWDGPWDEGVGDPGM*TSSKRM
Trigger: CATCCTCTTTGAAGAAGTCCACATACCTGGGTCTCC...AACGCCCTCATCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCCCGGGCGGGGAAGTGTaGCACGAGTTCGCCACCATA +
Preference number: 4 (lower is better)
Translates to: AQVCRKAGKIPYTSFLDFPGGEV*HEFATI
Trigger: TATGGTGGCGAACTCGTGCCACACTTCCCCGCCCGG...GAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGGTCACCCCCAACCTaGGTCAGCGGCCGAGAGTCA +
Preference number: 4 (lower is better)
Translates to: AQVCRKAGKIPYTSFLDFWSPPT*VSGRES
Trigger: TGACTCTCGGCCGCTGACCCAGGTTGGGGGTGACCA...GAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAAACCTATGGTCACCCCCAACCTaGGTCAGCGGCCGAGAGTCA +
Preference number: 4 (lower is better)
Translates to: YYTCHKSGHFLRTKQQNLWSPPT*VSGRES
Trigger: TGACTCTCGGCCGCTGACCCAGGTTGGGGGTGACCA...TAGGTTTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGTTCCTGGTCTGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTGAGGGGTTGGCAATGTaGGCCTTGATGTGGTCACCC +
Preference number: 4 (lower is better)
Translates to: CSWSVCCSGWSVPPRVLVEGLAM*ALMWSP
Trigger: GGGTGACCACATCAAGGCCCACATTGCCAACCCCTC...AACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACAGACCAGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCACTCCACCAAGCCTCGTaGGCCCAGAACCCTCACTTC +
Preference number: 4 (lower is better)
Translates to: PDHTTHLGSGNVPDTLTSLHQAS*AQNPHF
Trigger: GAAGTGAGGGTTCTGGGCCCACGAGGCTTGGTGGAG...TGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGGGACGGACCTTGGGATGAGGGCGTTAATCCATGGGCCCCTCTGAGATCACTTAGGTCCCTCCTGAGATaGGGTGTAGGTTACTGTGTG +
Preference number: 4 (lower is better)
Translates to: WDGPWDEGVNPWAPLRSLRSLLR*GVGYCV
Trigger: CACACAGTAACCTACACCCCATCTCAGGAGGGACCT...AAGTGATCTCAGAGGGGCCCATGGATTAACGCCCTCATCCCAAGGTCCGTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CTGAGAAGTGTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTAGTCCACAGGTAGACTaGCAGGCACACCATAGGAAC +
Preference number: 4 (lower is better)
Translates to: LRSVRRPQSMGVLAMRSGSPQVD*QAHHRN
Trigger: GTTCCTATGGTGTGCCTGCCAGTCTACCTGTGGACT...ACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTACACTTCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTAAAGCAGTGAGTCCACAGGTAGACTaGCAGGCACACCATAGGAAC +
Preference number: 4 (lower is better)
Translates to: VRRPQSMGVLAMRSGKAVSPQVD*QAHHRN
Trigger: GTTCCTATGGTGTGCCTGCCAGTCTACCTGTGGACT...CACTGCTTTACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGACGATTCCAGGACCCGTaGCCAGGCACTTGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: QWLVCSTKSSGLHLVYSGRFQDP*PGTCWH
Trigger: ATGCCAGCAAGTGCCTGGCCACGGGTCCTGGAATCG...TCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGCGCCAGTTTTCACAGTaGAGGCGATTCCAGGACCCG +
Preference number: 4 (lower is better)
Translates to: CLLQWLVCSTKSSGLHLVRQFSQ*RRFQDP
Trigger: CGGGTCCTGGAATCGCCTCCACTGTGAAAACTGGCG...CACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTAAAGCAGTGCCTTCCCGGCAGTCTTaGCATCAACCACAAAGCCTA +
Preference number: 4 (lower is better)
Translates to: VRRPQSMGVLAMRSGKAVPSRQS*HQPQSL
Trigger: TAGGCTTTGTGGTTGATGCCAAGACTGCCGGGAAGG...CACTGCTTTACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CTGAGAAGTGTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTCCACAATCTCAGGTGTaGCTGTCTTCCCAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: LRSVRRPQSMGVLAMRSGPQSQV*LSSQKA
Trigger: TGCCTTCTGGGAAGACAGCCACACCTGAGATTGTGG...ACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTACACTTCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTAAAGCAGTGGGGCTCTCAGGGATGTaGCTGCCCATGTATTTGATG +
Preference number: 4 (lower is better)
Translates to: VRRPQSMGVLAMRSGKAVGLSGM*LPMYLM
Trigger: CATCAAATACATGGGCAGCCACATCCCTGAGAGCCC...CACTGCTTTACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GCCGGGATGGTCTCGTGTGGTGATTCTGCAAGAAATAATCACCAGAGCGAGGGGCACGTAGAACTGGAGTaGGCTCTCAGGGATGTGGCT +
Preference number: 4 (lower is better)
Translates to: AGMVSCGDSARNNHQSEGHVELE*ALRDVA
Trigger: AGCCACATCCCTGAGAGCCCACTCCAGTTCTACGTG...CCCCTCGCTCTGGTGATTATTTCTTGCAGAATCACCACACGAGACCATCCCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTAAAGCAGTGAGGTGGCAGTTTTGTTaGCCACTCCATACACGAGGC +
Preference number: 4 (lower is better)
Translates to: VRRPQSMGVLAMRSGKAVRWQFC*PLHTRG
Trigger: GCCTCGTGTATGGAGTGGCCAACAAAACTGCCACCT...CACTGCTTTACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCGCGGCCATAGACTTTaGCTCGGCGGGCGTCACCAA +
Preference number: 4 (lower is better)
Translates to: GLQEGRQNSLHLISGFLHRGHRL*LGGRHQ
Trigger: TTGGTGACGCCCGCCGAGCCAAAGTCTATGGCCGCG...GTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAAGGATGTCCACTTTGCTaGGGCCTTCCACCGCCAAGG +
Preference number: 4 (lower is better)
Translates to: PDTTPATRVATSSGLSSKGCPLC*GLPPPR
Trigger: CCTTGGCGGTGGAAGGCCCCAGCAAAGTGGACATCC...TTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGAGAGGGGCTGGTGACGTaGGCCGACATATCACTGCTG +
Preference number: 4 (lower is better)
Translates to: QWLVCSTKSSGLHLVYSGEGLVT*ADISLL
Trigger: CAGCAGTGATATGTCGGCCCACGTCACCAGCCCCTC...TCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAAGAGGGGCTGGTGACGTaGGCCGACATATCACTGCTG +
Preference number: 4 (lower is better)
Translates to: PDTTPATRVATSSGLSSKEGLVT*ADISLL
Trigger: CAGCAGTGATATGTCGGCCCACGTCACCAGCCCCTC...TTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TCCCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACACCGACTGGATACCTGTaGTGCCCCCTTCGAGTCCCG +
Preference number: 4 (lower is better)
Translates to: SQLSGQRPAGVSFCPVCTPTGYL*CPLRVP
Trigger: CGGGACTCGAAGGGGGCACCACAGGTATCCAGTCGG...TGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGGGACGGACCTTGGGATGAGGGCGTTAATCCATGGGCCCCTCTGAGATCACTTAGGATGCCTTGGGAATaGCGCTATAGCAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: WDGPWDEGVNPWAPLRSLRMPWE*RYSRSL
Trigger: CAGAGACCTGCTATAGCGCCATTCCCAAGGCATCCT...AAGTGATCTCAGAGGGGCCCATGGATTAACGCCCTCATCCCAAGGTCCGTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp ATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGAGTCTGCTGCAGTGGCTaGTCTGTTCCACCAAGAGTT +
Preference number: 4 (lower is better)
Translates to: MKLAGAGVECYVMGRTLGVCCSG*SVPPRV
Trigger: AACTCTTGGTGGAACAGACCAGCCACTGCAGCAGAC...TCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAGCCAACTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TCTGCCTGCCCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTCATGGGACGGACCTTaGGATGAGGGCGTTAATCCA +
Preference number: 4 (lower is better)
Translates to: SACPDHTTHLGSGNVPDTSWDGP*DEGVNP
Trigger: TGGATTAACGCCCTCATCCCAAGGTCCGTCCCATGA...AGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGGGCAGGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp ATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGACTGGACCTTTTGCAGTaGCTTTACTGGCATCTCCCT +
Preference number: 4 (lower is better)
Translates to: MKLAGAGVECYVMGRTLGLDLLQ*LYWHLP
Trigger: AGGGAGATGCCAGTAAAGTCACTGCAAAAGGTCCAG...TCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAGCCAACTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TCTGCCTGCCCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTCGTCACACATGATGTaGACAGCATATTCGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SACPDHTTHLGSGNVPDTSSHMM*TAYSPG
Trigger: GCCTGGCGAATATGCTGTTCACATCATGTGTGACGA...AGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGGGCAGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp ATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGATCGTCACACATGATGTaGACAGCATATTCGCCAGGC +
Preference number: 4 (lower is better)
Translates to: MKLAGAGVECYVMGRTLGSSHMM*TAYSPG
Trigger: GCCTGGCGAATATGCTGTTCACATCATGTGTGACGA...TCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAGCCAACTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TTTGGCTTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCTGTACGGGCTGTCCTTaGTGTCTTCGTCGTCACACA +
Preference number: 4 (lower is better)
Translates to: FGFRVPAYNTRGPFTSGSCTGCP*CLRRHT
Trigger: TGTGTGACGACGAAGACATCAAGGACAGCCCGTACA...GGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAAGCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCCTTCCGAGAGGGGCTaGGGATTGTCACGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GLQEGRQNSLHLISGFLHPSERG*GLSRPA
Trigger: AGCTGGACGTGACAATCCTCAGCCCCTCTCGGAAGG...GTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTGGAGCGTGTGCCTCCTCCCGAGGGATaGACTTGGCCGTGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: HFKHFGKTAQADEGLERVPPPEG*TWPCCS
Trigger: AGAACAGCACGGCCAAGTTCATCCCTCGGGAGGAGG...CACACGCTCCAGCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGACCTCCTCCCGAGGGATaGACTTGGCCGTGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: PTFRPKTRRSFILSCLYRPPPEG*TWPCCS
Trigger: AGAACAGCACGGCCAAGTTCATCCCTCGGGAGGAGG...TCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp ATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTGGAGCGTGTGCTGCTGTCCACCGTaGAGGACTGCAGGACACGGG +
Preference number: 4 (lower is better)
Translates to: ITLNILVRLPRLMKGWSVCCCPP*RTAGHG
Trigger: CCCGTGTCCTGCAGTCCTTCACGGTGGACAGCAGCA...CACGCTCCAGCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GTGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTGTCGGGGATGTAGGTaGCAGCATACGTGCCATCTT +
Preference number: 4 (lower is better)
Translates to: VVLSHQAPGCSTFCRVGFCRGCR*QHTCHL
Trigger: AAGATGGCACGTATGCTGTCACCTACATCCCCGACA...AAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TTTGGCTTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCTGTCGGGGATGTAGGTaGCAGCATACGTGCCATCTT +
Preference number: 4 (lower is better)
Translates to: FGFRVPAYNTRGPFTSGSCRGCR*QHTCHL
Trigger: AAGATGGCACGTATGCTGTCACCTACATCCCCGACA...GGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAAGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGACGTCACCCCCGTAGGTaGCTCCAATCATATAGCGCC +
Preference number: 4 (lower is better)
Translates to: QWLVCSTKSSGLHLVYSGRHPRR*LQSYSA
Trigger: GGCGCTATATGATTGGAGTCACCTACGGGGGTGACG...TCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TTTGGCTTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCCATCTTCATTCTCAATaGCATCGGCCTCGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: FGFRVPAYNTRGPFTSGSHLHSQ*HRPRPQ
Trigger: CTGAGGCCGAGGCCGATGTCATTGAGAATGAAGATG...GGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAAGCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGAAAGTCCGGCCTTCTaGCAGGCCGCGGCCATAGAC +
Preference number: 4 (lower is better)
Translates to: LRSAGRQAKFPTPHFWISESPAF*QAAAID
Trigger: GTCTATGGCCGCGGCCTGTCAGAAGGCCGGACTTTC...AGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACCCGGGTCCAAATGCTaGACTCAGCTGGGACTCCCG +
Preference number: 4 (lower is better)
Translates to: SAGRQAKFPTPHFWISAPPGSKC*TQLGLP
Trigger: CGGGAGTCCCAGCTGAGTTCAGCATTTGGACCCGGG...TGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCCCCCAACGCGCACTTTaGAGGGGCTTCCAACCACGT +
Preference number: 4 (lower is better)
Translates to: AQVCRKAGKIPYTSFLDFPQRAL*RGFQPR
Trigger: ACGTGGTTGGAAGCCCCTTCAAAGTGCGCGTTGGGG...GAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TGTTCCTGGTCTGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTATGGGCCTTCGATGGTaGCGGATAATGTCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: CSWSVCCSGWSVPPRVLVMGLRW*RIMSLD
Trigger: GTCCAGGGACATTATCCGTCACCATCGAAGGCCCAT...AACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACAGACCAGGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TCCCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACATGCCACTCTGCCCTCTaGGTTTCTGTAGGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: SQLSGQRPAGVSFCPVCTCHSAL*VSVGCP
Trigger: CGGGCACCCTACAGAAACTCAGAGGGCAGAGTGGCA...TGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TGTTCCTGGTCTGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTAGAAAAAGTGACCCATaGAGTTGGCTGGGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: CSWSVCCSGWSVPPRVLVRKSDP*SWLGRV
Trigger: CACCCGCCCCAGCCAACTTCATGGGTCACTTTTTCT...AACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACAGACCAGGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CTGAGAAGTGTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTGTGAACTTGGCTGGCTaGTTCACCATGTTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: LRSVRRPQSMGVLAMRSGVNLAG*FTMFPV
Trigger: CACTGGAAACATGGTGAAGCAGCCAGCCAAGTTCAC...ACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTACACTTCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCGGGCTGCAACCCTGGACCTTTTaGAGTGACTTTACTGGCATC +
Preference number: 4 (lower is better)
Translates to: FRVPAYNTRGPFTSGSGLQPWTF*SDFTGI
Trigger: GATGCCAGTAAAGTCACTGCAAAAGGTCCAGGGTTG...CAGCCCGGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTCAAGCACGGACTTTCTaGATACCCGCTTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: WSFHIRLRAVPLSVGWAFQARTF*IPASGP
Trigger: TGGCCCTGAAGCGGGTATGCAGAAAGTCCGTGCTTG...AAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TCATTCCAAAGCCAGCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCCCATTTTCCACACCTaGTTTGCTGAGCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SFQSQLRSAGRQAKFPTPPIFHT*FAEPWA
Trigger: GGCCCAGGGCTCAGCAAAGCAGGTGTGGAAAATGGG...AGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGGAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CCAGAAAAAGTGACCCATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATCCCATTTTCCACACCTaGTTTGCTGAGCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PEKVTHEVGWGGCGVLCHPIFHT*FAEPWA
Trigger: GGCCCAGGGCTCAGCAAAGCAGGTGTGGAAAATGGG...ATGACATAACACTCCACACCCGCCCCAGCCAACTTCATGGGTCACTTTTTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp AGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACGTGGGCCTTCACCTTaGTGGGATCTGGTGGCAGCG +
Preference number: 4 (lower is better)
Translates to: RSAGRQAKFPTPHFWISARGPSP*WDLVAA
Trigger: CGCTGCCACCAGATCCCAGCAAGGTGAAGGCCCACG...TGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp ACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCATTCCAAAGCCGTGGGCCTTCACCTTaGTGGGATCTGGTGGCAGCG +
Preference number: 4 (lower is better)
Translates to: TTHLGSGNVPDTLTSFQSRGPSP*WDLVAA
Trigger: CGCTGCCACCAGATCCCAGCAAGGTGAAGGCCCACG...GCTTTGGAATGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATGGTCAACGTGTACATaGCGGCCGTCAGGGGCACGT +
Preference number: 4 (lower is better)
Translates to: PTFRPKTRRSFILSCLYRWSTCT*RPSGAR
Trigger: ACGTGCCCCTGACGGCCGGCATGTACACGTTGACCA...TCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TTTGGCTTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCACTCAGCACTGCAGCTaGCATCCTTGTTGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: FGFRVPAYNTRGPFTSGSTQHCS*HPCCLC
Trigger: GCAGAGACAACAAGGATGGCAGCTGCAGTGCTGAGT...GGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAAGCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp GTGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTACTCAGCACTGCAGCTaGCATCCTTGTTGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: VVLSHQAPGCSTFCRVGFTQHCS*HPCCLC
Trigger: GCAGAGACAACAAGGATGGCAGCTGCAGTGCTGAGT...AAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp ACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCATTCCAAAGCTCCACCGTGAAGGACTaGAGGACACGGGCTCGGACG +
Preference number: 4 (lower is better)
Translates to: TTHLGSGNVPDTLTSFQSSTVKD*RTRART
Trigger: CGTCCGAGCCCGTGTCCTGCAGTCCTTCACGGTGGA...GCTTTGGAATGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CCCAACACTCGCCCCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGCACTGGCAGTCACTTTaGTGGCATCATATGTGGGAA +
Preference number: 4 (lower is better)
Translates to: PNTRPRYYTCHKSGHFLRHWQSL*WHHMWE
Trigger: TTCCCACATATGATGCCAGCAAAGTGACTGCCAGTG...CCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGGGCGAGTGTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGCTGGGGTCAGAACCGTaGAGGTCACTTTACCCTTCC +
Preference number: 4 (lower is better)
Translates to: CLLQWLVCSTKSSGLHLVLGSEP*RSLYPS
Trigger: GGAAGGGTAAAGTGACCTGCACGGTTCTGACCCCAG...CACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CTGAGAAGTGTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTCATAGATCACATATGTaGCCGGCTTGGCAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: LRSVRRPQSMGVLAMRSGHRSHM*PAWQLC
Trigger: ACACAGCTGCCAAGCCGGGCACATATGTGATCTATG...ACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTACACTTCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CTGAGAAGTGTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTGAGGCCTGGACCGTATaGAGAAACACTTCCACTGTT +
Preference number: 4 (lower is better)
Translates to: LRSVRRPQSMGVLAMRSGEAWTV*RNTSTV
Trigger: AACAGTGGAAGTGTTTCTGCATACGGTCCAGGCCTC...ACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTACACTTCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCATCTGGATGTCCACTTTaGTGGGGCCTTCCACCGCCA +
Preference number: 4 (lower is better)
Translates to: PDHTTHLGSGNVPDTLTSSGCPL*WGLPPP
Trigger: TGGCGGTGGAAGGCCCCAGCAAAGTGGACATCCAGA...TGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp AGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCATTGACGCTGACCGTGTaGACGCCCATCTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RSAGRQAKFPTPHFWISALTLTV*TPISWG
Trigger: GCCCCAGGAGATGGGCGTGCACACGGTCAGCGTCAA...TGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TGGGACGGACCTTGGGATGAGGGCGTTAATCCATGGGCCCCTCTGAGATCACTTGGGGCTGTGCACCTTTaGATCAATCTTGCCTTTTGC +
Preference number: 4 (lower is better)
Translates to: WDGPWDEGVNPWAPLRSLGAVHL*INLAFC
Trigger: GCAAAAGGCAAGATTGATGCAAAGGTGCACAGCCCC...AAGTGATCTCAGAGGGGCCCATGGATTAACGCCCTCATCCCAAGGTCCGTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGATGAGGGCGTTTCATTTCTGGATTTCTaGACCACACAGCTCTCACTG +
Preference number: 4 (lower is better)
Translates to: LGRVWSVMSWDGPWDEGVSFLDF*TTQLSL
Trigger: CAGTGAGAGCTGTGTGGTGCAGAAATCCAGAAATGA...AACGCCCTCATCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp GTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTAAAGCAGTGAAGCCAGCTCAGGTCTaGAGGAAGGCAGGCAAAATT +
Preference number: 4 (lower is better)
Translates to: VRRPQSMGVLAMRSGKAVKPAQV*RKAGKI
Trigger: AATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTT...CACTGCTTTACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TCTGCCTGCCCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTCAAAACCTAAAGGTCTaGCTGCCCAGACCACACTAC +
Preference number: 4 (lower is better)
Translates to: SACPDHTTHLGSGNVPDTQNLKV*LPRPHY
Trigger: GTAGTGTGGTCTGGGCAGGCAGACCTTTAGGTTTTG...AGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGGGCAGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp ACTGCTGTTGATTTGTCATGCCAACGACTGTGCCTGCACTGCCGTGGTGAGGCCGCTGTTGATTTGTCATaGCAACGACTGTGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: TAVDLSCQRLCLHCRGEAAVDLS*QRLCLH
Trigger: GTGCAGGCACAGTCGTTGGCATGACAAATCAACAGC...GGCCTCACCACGGCAGTGCAGGCACAGTCGTTGGCATGACAAATCAACAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470231.1
CDS-3UTR CCA 90 bp TCACCAGAGCGAGGGGACAGGTACTTGAGAGACATGTGGGCCTGGCTGCCACTCACACATCGATACACCTaGTTTCCTTTGTCTTCCACG +
Preference number: 4 (lower is better)
Translates to: SPERGDRYLRDMWAWLPLTHRYT*FPLSST
Trigger: CGTGGAAGACAAAGGAAACCAGGTGTATCGATGTGT...GAGTGGCAGCCAGGCCCACATGTCTCTCAAGTACCTGTCCCCTCGCTCTGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGATGAGGGCGTTACACATCGATACACCTaGTTTCCTTTGTCTTCCACG +
Preference number: 4 (lower is better)
Translates to: LGRVWSVMSWDGPWDEGVTHRYT*FPLSST
Trigger: CGTGGAAGACAAAGGAAACCAGGTGTATCGATGTGT...AACGCCCTCATCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TCCCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGGCCCGGCAGGCATTTaGATTGCAGGCTTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: SQLSGQRPAGVSFCPVCTGPAGI*IAGFPN
Trigger: GTTGGGGAAGCCTGCAATCCAAATGCCTGCCGGGCC...TGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCGGCCCGGCAGGCATTTaGATTGCAGGCTTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: AQVCRKAGKIPYTSFLDFGPAGI*IAGFPN
Trigger: GTTGGGGAAGCCTGCAATCCAAATGCCTGCCGGGCC...GAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp ACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCATTCCAAAGCGTAGGCCTCGGCCACTaGCCCGGCAGGCATTTGGAT +
Preference number: 4 (lower is better)
Translates to: TTHLGSGNVPDTLTSFQSVGLGH*PGRHLD
Trigger: ATCCAAATGCCTGCCGGGCCAGTGGCCGAGGCCTAC...GCTTTGGAATGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAAGTAGCCTCCCGTGGCTaGGTGGATGAAGGCCATGTA +
Preference number: 4 (lower is better)
Translates to: PDTTPATRVATSSGLSSKVASRG*VDEGHV
Trigger: TACATGGCCTTCATCCACCCAGCCACGGGAGGCTAC...TTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGATCTTCCTTGCTGGGATCTGGTaGCAGCGAGGCCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: AGLFHQEFWFAPSVLRIFLAGIW*QRGLHC
Trigger: ACAGTGGAGGCCTCGCTGCCACCAGATCCCAGCAAG...GAAGATCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGTTCCTGGTCTGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTACTCCCCGGGTTTTGTaGGAAGGTAAGAGACGGAGC +
Preference number: 4 (lower is better)
Translates to: CSWSVCCSGWSVPPRVLVTPRVL*EGKRRS
Trigger: GCTCCGTCTCTTACCTTCCCACAAAACCCGGGGAGT...AACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACAGACCAGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp ACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCATTCCAAAGCCCCGTGCTCGAGACCTaGCCCCGATGCCACGACTTT +
Preference number: 4 (lower is better)
Translates to: TTHLGSGNVPDTLTSFQSPVLET*PRCHDF
Trigger: AAAGTCGTGGCATCGGGGCCAGGTCTCGAGCACGGG...GCTTTGGAATGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACACAGCTCCCGTGCTCGAGACCTaGCCCCGATGCCACGACTTT +
Preference number: 4 (lower is better)
Translates to: EGRQNSLHLISGFLHHTAPVLET*PRCHDF
Trigger: AAAGTCGTGGCATCGGGGCCAGGTCTCGAGCACGGG...AGCTGTGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GTGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTCGCCACCATACTTCATaGTCAACGTGTACATGCCGG +
Preference number: 4 (lower is better)
Translates to: VVLSHQAPGCSTFCRVGFRHHTS*STCTCR
Trigger: CCGGCATGTACACGTTGACCATGAAGTATGGTGGCG...AAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACACAGCTCCGGGCGGGGAAGTGTaGCACGAGTTCGCCACCATA +
Preference number: 4 (lower is better)
Translates to: EGRQNSLHLISGFLHHTAPGGEV*HEFATI
Trigger: TATGGTGGCGAACTCGTGCCACACTTCCCCGCCCGG...AGCTGTGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTCCGGGCGGGGAAGTGTaGCACGAGTTCGCCACCATA +
Preference number: 4 (lower is better)
Translates to: LRSAGRQAKFPTPHFWISPGGEV*HEFATI
Trigger: TATGGTGGCGAACTCGTGCCACACTTCCCCGCCCGG...AGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAAGAGGGGTTGGCAATGTaGGCCTTGATGTGGTCACCC +
Preference number: 4 (lower is better)
Translates to: PDTTPATRVATSSGLSSKEGLAM*ALMWSP
Trigger: GGGTGACCACATCAAGGCCCACATTGCCAACCCCTC...TTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGAGTCCACCACGTTCACTaGCTCCACCAAGCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: PTFRPKTRRSFILSCLYRVHHVH*LHQASW
Trigger: CCACGAGGCTTGGTGGAGCCAGTGAACGTGGTGGAC...TCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GGAAACTGCTCGCCACTGCAGAATTTCTTCAGACCAAGGAAGGGACTGAAACGGCGCCAGTTTTCACAGTaGAGGCGATTCCAGGACCCG +
Preference number: 4 (lower is better)
Translates to: GNCSPLQNFFRPRKGLKRRQFSQ*RRFQDP
Trigger: CGGGTCCTGGAATCGCCTCCACTGTGAAAACTGGCG...CCGTTTCAGTCCCTTCCTTGGTCTGAAGAAATTCTGCAGTGGCGAGCAGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TACCCCCAACACTCGCCCCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTTCACCAATCTCCGACTaGACCACCATGATAGACACG +
Preference number: 4 (lower is better)
Translates to: YPQHSPQILHLPQEWPLPSPISD*TTMIDT
Trigger: CGTGTCTATCATGGTGGTCCAGTCGGAGATTGGTGA...AGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGGGCGAGTGTTGGGGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GTGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTAATGCTGAACTCAGCTaGGACTCCCGCTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: VVLSHQAPGCSTFCRVGFNAELS*DSRFSS
Trigger: AGAGGAGAAGCGGGAGTCCCAGCTGAGTTCAGCATT...AAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TTTGGCTTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCAATGCTGAACTCAGCTaGGACTCCCGCTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: FGFRVPAYNTRGPFTSGSNAELS*DSRFSS
Trigger: AGAGGAGAAGCGGGAGTCCCAGCTGAGTTCAGCATT...GGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAAGCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CACTTTAACCTCATTCCAAAGCCAGCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCGACTGGATACCTGTaGTGCCCCCTTCGAGTCCCG +
Preference number: 4 (lower is better)
Translates to: HFNLIPKPAQVCRKAGKIPTGYL*CPLRVP
Trigger: CGGGACTCGAAGGGGGCACCACAGGTATCCAGTCGG...AATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGGAATGAGGTTAAAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACACCGACTGGATACCTGTaGTGCCCCCTTCGAGTCCCG +
Preference number: 4 (lower is better)
Translates to: CRKAGKIPYTSFLDFCTTPTGYL*CPLRVP
Trigger: CGGGACTCGAAGGGGGCACCACAGGTATCCAGTCGG...TGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGCTGACTCCACCAGGATaGATGAGGTCTCGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: CLLQWLVCSTKSSGLHLVLTPPG*MRSRWL
Trigger: CAGCCAACGAGACCTCATCCATCCTGGTGGAGTCAG...CACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCAGAAAAAGTGACCCATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATCGTCCGAGGATGCCTTaGGAATGGCGCTATAGCAGG +
Preference number: 4 (lower is better)
Translates to: PEKVTHEVGWGGCGVLCHRPRMP*EWRYSR
Trigger: CCTGCTATAGCGCCATTCCCAAGGCATCCTCGGACG...ATGACATAACACTCCACACCCGCCCCAGCCAACTTCATGGGTCACTTTTTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAAACCTAAGAGACATGTGGGCCTaGCTGCCACTCTGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: YYTCHKSGHFLRTKQQNLRDMWA*LPLCPL
Trigger: CAGAGGGCAGAGTGGCAGCCAGGCCCACATGTCTCT...TAGGTTTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGGGGATCTTTGGCAAGTaGGAAACTGCTCGCCACTGC +
Preference number: 4 (lower is better)
Translates to: CLLQWLVCSTKSSGLHLVGIFGK*ETARHC
Trigger: GCAGTGGCGAGCAGTTTCCCACTTGCCAAAGATCCC...CACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GCCGGGATGGTCTCGTGTGGTGATTCTGCAAGAAATAATCACCAGAGCGAGGGGTCATGGGACGGACCTTaGGATGAGGGCGTTAATCCA +
Preference number: 4 (lower is better)
Translates to: AGMVSCGDSARNNHQSEGSWDGP*DEGVNP
Trigger: TGGATTAACGCCCTCATCCCAAGGTCCGTCCCATGA...CCCCTCGCTCTGGTGATTATTTCTTGCAGAATCACCACACGAGACCATCCCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTACCCCTCATGGGACGGACCTTaGGATGAGGGCGTTAATCCA +
Preference number: 4 (lower is better)
Translates to: LSHQAPGCSTFCRVGFYPSWDGP*DEGVNP
Trigger: TGGATTAACGCCCTCATCCCAAGGTCCGTCCCATGA...GGGGTAAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TTTGGCTTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCACCACACTACACATTTaGGCTCAGGCAACGTCCCTG +
Preference number: 4 (lower is better)
Translates to: FGFRVPAYNTRGPFTSGSTTLHI*AQATSL
Trigger: CAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGT...GGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAAGCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
3UTR CAA 72 bp CTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTaGCACCTAGTGTACTCAGGATCTTCTCAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: LQWLVCSTKSSG*HLVYSGSSQPP
Trigger: AGGGGGCTGAGAAGATCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.3
ENST00000429972.6
CDS-3UTR TCA 90 bp GGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACAAGATCTTGACCACGTaGGGGCCAGGCTGCATGGGT +
Preference number: 4 (lower is better)
Translates to: GLQEGRQNSLHLISGFLHKILTT*GPGCMG
Trigger: ACCCATGCAGCCTGGCCCTCACGTGGTCAAGATCTT...GTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GCCGGGATGGTCTCGTGTGGTGATTCTGCAAGAAATAATCACCAGAGCGAGGGGCTTTGGTGTCAACCTTaGAATCTGTGGTCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: AGMVSCGDSARNNHQSEGLWCQP*NLWSPG
Trigger: TCCGGGAGACCACAGATTTCAAGGTTGACACCAAAG...CCCCTCGCTCTGGTGATTATTTCTTGCAGAATCACCACACGAGACCATCCCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTTGTACGGGCTGTCCTTaGTGTCTTCGTCGTCACACA +
Preference number: 4 (lower is better)
Translates to: WSFHIRLRAVPLSVGWAFCTGCP*CLRRHT
Trigger: TGTGTGACGACGAAGACATCAAGGACAGCCCGTACA...AAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TACCCCCAACACTCGCCCCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTACTCGGCCAGGTTGTTaGCAATGCATCCAGATTTCT +
Preference number: 4 (lower is better)
Translates to: YPQHSPQILHLPQEWPLPTRPGC*QCIQIS
Trigger: AGAAATCTGGATGCATTGTCAACAACCTGGCCGAGT...AGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGGGCGAGTGTTGGGGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp ATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGAACTCGGCCAGGTTGTTaGCAATGCATCCAGATTTCT +
Preference number: 4 (lower is better)
Translates to: MKLAGAGVECYVMGRTLGTRPGC*QCIQIS
Trigger: AGAAATCTGGATGCATTGTCAACAACCTGGCCGAGT...TCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAGCCAACTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGACTTCACCGGGGTGTATaGGCATGCATATGTGCCGTC +
Preference number: 4 (lower is better)
Translates to: QWLVCSTKSSGLHLVYSGLHRGV*ACICAV
Trigger: GACGGCACATATGCATGCTCATACACCCCGGTGAAG...TCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TGTTCCTGGTCTGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTCCTTGGTGTAGACAGTaGAGTGGGTCGGTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: CSWSVCCSGWSVPPRVLVPWCRQ*SGSVSH
Trigger: ATGGGAAACCGACCCACTTCACTGTCTACACCAAGG...AACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACAGACCAGGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTCCTTGGTGTAGACAGTaGAGTGGGTCGGTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: WSFHIRLRAVPLSVGWAFPWCRQ*SGSVSH
Trigger: ATGGGAAACCGACCCACTTCACTGTCTACACCAAGG...AAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACACCTTCCGAGAGGGGCTaGGGATTGTCACGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: CRKAGKIPYTSFLDFCTTPSERG*GLSRPA
Trigger: AGCTGGACGTGACAATCCTCAGCCCCTCTCGGAAGG...TGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAACTTTGGTATCGATGGTaGACTCGGCAGGCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: PDTTPATRVATSSGLSSKLWYRW*TRQACP
Trigger: TGGGCAAGCCTGCCGAGTTCACCATCGATACCAAAG...TTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCCACCTTCACAGGAACCCTaGAGGGGCTGCCGGGGATGT +
Preference number: 4 (lower is better)
Translates to: SSPLPNDNQTRCPLFLCPPSQEP*RGCRGC
Trigger: ACATCCCCGGCAGCCCCTTCAGGGTTCCTGTGAAGG...TGGGCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TGTTCCTGGTCTGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTCATCTTCATTCTCAATaGCATCGGCCTCGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: CSWSVCCSGWSVPPRVLVHLHSQ*HRPRPQ
Trigger: CTGAGGCCGAGGCCGATGTCATTGAGAATGAAGATG...AACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACAGACCAGGAACA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GCCGGGATGGTCTCGTGTGGTGATTCTGCAAGAAATAATCACCAGAGCGAGGGGCCCTTGTGTCCACGATaGAGTCAGACATCTCGAAAG +
Preference number: 4 (lower is better)
Translates to: AGMVSCGDSARNNHQSEGPLCPR*SQTSRK
Trigger: CTTTCGAGATGTCTGACTTCATCGTGGACACAAGGG...CCCCTCGCTCTGGTGATTATTTCTTGCAGAATCACCACACGAGACCATCCCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACAAACCGGACGCAGTGTaGGTTCTTCCCCATGGGCAC +
Preference number: 4 (lower is better)
Translates to: GLQEGRQNSLHLISGFLHKPDAV*VLPHGH
Trigger: GTGCCCATGGGGAAGAACTCACACTGCGTCCGGTTT...GTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CCCTCTGAGATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTGGGGGTGTTGGCGATaGGGAGCGGTAAAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: PSEITLNILVRLPRLMKGWGCWR*GAVKQC
Trigger: GCACTGCTTTACCGCTCCTCATCGCCAACACCCCCA...GCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGATCTCAGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGGAGCTCCCCACTTCCTaGAGCTTTGGTGTCAACCTT +
Preference number: 4 (lower is better)
Translates to: CLLQWLVCSTKSSGLHLVELPTS*SFGVNL
Trigger: AAGGTTGACACCAAAGCTGCAGGAAGTGGGGAGCTC...CACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TCATTCCAAAGCCAGCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTAGAGGGCTGTTGAACTaGACGTTGAGCGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: SFQSQLRSAGRQAKFPTPRGLLN*TLSGAF
Trigger: GAAAGCCCCGCTCAACGTGCAGTTCAACAGCCCTCT...AGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGGAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACATGGTCAACGTGTACATaGCGGCCGTCAGGGGCACGT +
Preference number: 4 (lower is better)
Translates to: CRKAGKIPYTSFLDFCTTWSTCT*RPSGAR
Trigger: ACGTGCCCCTGACGGCCGGCATGTACACGTTGACCA...TGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACCAGGTCCTTGGGCTTaGACCCTAGATGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: SAGRQAKFPTPHFWISAPPGPWA*TLDGWQ
Trigger: CTGCCAGCCATCTAGGGTGCAAGCCCAAGGACCTGG...TGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp ACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCATTCCAAAGCCCAGGTCCTTGGGCTTaGACCCTAGATGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: TTHLGSGNVPDTLTSFQSPGPWA*TLDGWQ
Trigger: CTGCCAGCCATCTAGGGTGCAAGCCCAAGGACCTGG...GCTTTGGAATGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CCAGAAAAAGTGACCCATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATACATGCATTTACCGGTaGCTCCTCCACGGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: PEKVTHEVGWGGCGVLCHTCIYR*LLHGCD
Trigger: GTCACAGCCGTGGAGGAGGCACCGGTAAATGCATGT...ATGACATAACACTCCACACCCGCCCCAGCCAACTTCATGGGTCACTTTTTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295956.9
CDS-3UTR GCA 90 bp TACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAAACCTATCTGGATGTCCACTTTaGTGGGGCCTTCCACCGCCA +
Preference number: 4 (lower is better)
Translates to: YYTCHKSGHFLRTKQQNLSGCPL*WGLPPP
Trigger: TGGCGGTGGAAGGCCCCAGCAAAGTGGACATCCAGA...TAGGTTTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TCCCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGGTTCAGGTCACAAATaGTCCCGACAGTGGCCACGG +
Preference number: 4 (lower is better)
Translates to: SQLSGQRPAGVSFCPVCTGSGHK*SRQWPR
Trigger: CCGTGGCCACTGTCGGGAGCATTTGTGACCTGAACC...TGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp GCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCGGTTCAGGTCACAAATaGTCCCGACAGTGGCCACGG +
Preference number: 4 (lower is better)
Translates to: AQVCRKAGKIPYTSFLDFGSGHK*SRQWPR
Trigger: CCGTGGCCACTGTCGGGAGCATTTGTGACCTGAACC...GAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp GCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGATCTTCGGTTCAGGTCACAAATaGTCCCGACAGTGGCCACGG +
Preference number: 4 (lower is better)
Translates to: AGLFHQEFWFAPSVLRIFGSGHK*SRQWPR
Trigger: CCGTGGCCACTGTCGGGAGCATTTGTGACCTGAACC...GAAGATCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCAACTGGATACCTGTGGTaGCCCCTTCGAGTCCCGTGC +
Preference number: 4 (lower is better)
Translates to: SAGRQAKFPTPHFWISAPTGYLW*PLRVPC
Trigger: GCACGGGACTCGAAGGGGGCACCACAGGTATCCAGT...TGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp ATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTGGAGCGTGACTGGATACCTGTGGTaGCCCCTTCGAGTCCCGTGC +
Preference number: 4 (lower is better)
Translates to: ITLNILVRLPRLMKGWSVTGYLW*PLRVPC
Trigger: GCACGGGACTCGAAGGGGGCACCACAGGTATCCAGT...CACGCTCCAGCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CACTTTAACCTCATTCCAAAGCCAGCTCAGGTCTGCAGGAAGGCAGGCAAAATTACTGGATACCTGTGGTaGCCCCTTCGAGTCCCGTGC +
Preference number: 4 (lower is better)
Translates to: HFNLIPKPAQVCRKAGKITGYLW*PLRVPC
Trigger: GCACGGGACTCGAAGGGGGCACCACAGGTATCCAGT...AATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGGAATGAGGTTAAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTGTTCCTGGTCTGTCTaGTGCAGTGGCTGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: CLLQWLVCSTKSSGLHLVCSWSV*CSGWSV
Trigger: AACAGACCAGCCACTGCAGCAGACAGACCAGGAACA...CACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGACCACCAATAAGCTGCTaGCCTTCTCTCCCCCAACCA +
Preference number: 4 (lower is better)
Translates to: QWLVCSTKSSGLHLVYSGPPISC*PSLPQP
Trigger: TGGTTGGGGGAGAGAAGGGCAGCAGCTTATTGGTGG...TCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp GTGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTCAAAACCTAAAGGTCTaGCTGCCCAGACCACACTAC +
Preference number: 4 (lower is better)
Translates to: VVLSHQAPGCSTFCRVGFQNLKV*LPRPHY
Trigger: GTAGTGTGGTCTGGGCAGGCAGACCTTTAGGTTTTG...AAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TCTGCCTGCCCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTCTTCAAATGGGCTCTTaGAGATGTGCTGTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: SACPDHTTHLGSGNVPDTLQMGS*RCAVLQ
Trigger: TTGCAGGACAGCACATCTCCAAGAGCCCATTTGAAG...AGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGGGCAGGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TCTGCCTGCCCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTAGTAGGTGGGCTTATTaGCGATGTTCCCTACAGCTT +
Preference number: 4 (lower is better)
Translates to: SACPDHTTHLGSGNVPDTSRWAY*RCSLQL
Trigger: AAGCTGTAGGGAACATCGCCAATAAGCCCACCTACT...AGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGGGCAGGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGTTCCTGGTCTGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTGAGGGCCAGGCTGCATaGGTTTGTACACACATCGAT +
Preference number: 4 (lower is better)
Translates to: CSWSVCCSGWSVPPRVLVEGQAA*VCTHID
Trigger: ATCGATGTGTGTACAAACCCATGCAGCCTGGCCCTC...AACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACAGACCAGGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp ATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTGGAGCGTGGGATACGGACGCCTTTaGGTTGTAGGCCTCGGCCAC +
Preference number: 4 (lower is better)
Translates to: ITLNILVRLPRLMKGWSVGYGRL*VVGLGH
Trigger: GTGGCCGAGGCCTACAACCCAAAGGCGTCCGTATCC...CACGCTCCAGCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCCACCTCCCGTGGCTGGGTaGATGAAGGCCATGTACGGG +
Preference number: 4 (lower is better)
Translates to: SSPLPNDNQTRCPLFLCPPPVAG*MKAMYG
Trigger: CCCGTACATGGCCTTCATCCACCCAGCCACGGGAGG...TGGGCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGGGACGGACCTTGGGATGAGGGCGTTAATCCATGGGCCCCTCTGAGATCACTTGTCACCTCCACTACATaGAGACCTTTCTCAAAGGGT +
Preference number: 4 (lower is better)
Translates to: WDGPWDEGVNPWAPLRSLVTSTT*RPFSKG
Trigger: ACCCTTTGAGAAAGGTCTCCATGTAGTGGAGGTGAC...AAGTGATCTCAGAGGGGCCCATGGATTAACGCCCTCATCCCAAGGTCCGTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CACTTTAACCTCATTCCAAAGCCAGCTCAGGTCTGCAGGAAGGCAGGCAAAATTCTCCACCAAGCCTCGTaGGCCCAGAACCCTCACTTC +
Preference number: 4 (lower is better)
Translates to: HFNLIPKPAQVCRKAGKILHQAS*AQNPHF
Trigger: GAAGTGAGGGTTCTGGGCCCACGAGGCTTGGTGGAG...AATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGGAATGAGGTTAAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTAGGTCCCTCCTGAGATaGGGTGTAGGTTACTGTGTG +
Preference number: 4 (lower is better)
Translates to: WSFHIRLRAVPLSVGWAFRSLLR*GVGYCV
Trigger: CACACAGTAACCTACACCCCATCTCAGGAGGGACCT...AAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGGGACGGACCTTGGGATGAGGGCGTTAATCCATGGGCCCCTCTGAGATCACTTTGGCAGTCACTTTGCTaGCATCATATGTGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: WDGPWDEGVNPWAPLRSLWQSLC*HHMWEG
Trigger: TCCTTCCCACATATGATGCCAGCAAAGTGACTGCCA...AAGTGATCTCAGAGGGGCCCATGGATTAACGCCCTCATCCCAAGGTCCGTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp ATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTGGAGCGTGTGGCCAGGCACTTGCTaGCATCACCCGTCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: ITLNILVRLPRLMKGWSVWPGTC*HHPSVW
Trigger: CCACACAGACGGGTGATGCCAGCAAGTGCCTGGCCA...CACGCTCCAGCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCCTCTGAGATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCCGATTCCAGGACCCGTaGCCAGGCACTTGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: PSEITLNILVRLPRLMKGRFQDP*PGTCWH
Trigger: ATGCCAGCAAGTGCCTGGCCACGGGTCCTGGAATCG...GCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGATCTCAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACGATTCCAGGACCCGTaGCCAGGCACTTGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: SAGRQAKFPTPHFWISAPRFQDP*PGTCWH
Trigger: ATGCCAGCAAGTGCCTGGCCACGGGTCCTGGAATCG...TGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CTGAGAAGTGTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTCGTCAGCGAATTTGGTaGAGACGATATAAACCCCAG +
Preference number: 4 (lower is better)
Translates to: LRSVRRPQSMGVLAMRSGRQRIW*RRYKPQ
Trigger: CTGGGGTTTATATCGTCTCCACCAAATTCGCTGACG...ACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTACACTTCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TCTGCCTGCCCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTCGTCAGCGAATTTGGTaGAGACGATATAAACCCCAG +
Preference number: 4 (lower is better)
Translates to: SACPDHTTHLGSGNVPDTRQRIW*RRYKPQ
Trigger: CTGGGGTTTATATCGTCTCCACCAAATTCGCTGACG...AGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGGGCAGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TCTGCCTGCCCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTGCTCGTCAGCGAATTTaGTGGAGACGATATAAACCC +
Preference number: 4 (lower is better)
Translates to: SACPDHTTHLGSGNVPDTARQRI*WRRYKP
Trigger: GGGTTTATATCGTCTCCACCAAATTCGCTGACGAGC...AGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGGGCAGGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TACCCCCAACACTCGCCCCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTGCTCGTCAGCGAATTTaGTGGAGACGATATAAACCC +
Preference number: 4 (lower is better)
Translates to: YPQHSPQILHLPQEWPLPARQRI*WRRYKP
Trigger: GGGTTTATATCGTCTCCACCAAATTCGCTGACGAGC...AGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGGGCGAGTGTTGGGGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp ATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGACATTTTAACCTTGGATaGGCCTTCGATGGTGACGGA +
Preference number: 4 (lower is better)
Translates to: MKLAGAGVECYVMGRTLGHFNLG*AFDGDG
Trigger: TCCGTCACCATCGAAGGCCCATCCAAGGTTAAAATG...TCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAGCCAACTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTGGAGCGTGTGCGTCCGAGGATGCCTTaGGAATGGCGCTATAGCAGG +
Preference number: 4 (lower is better)
Translates to: HFKHFGKTAQADEGLERVRPRMP*EWRYSR
Trigger: CCTGCTATAGCGCCATTCCCAAGGCATCCTCGGACG...CACACGCTCCAGCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTGTCTCATTGTGTTCCTaGTCTGTCTGCTGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: WSFHIRLRAVPLSVGWAFVSLCS*SVCCSG
Trigger: GCCACTGCAGCAGACAGACCAGGAACACAATGAGAC...AAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CACTTTAACCTCATTCCAAAGCCAGCTCAGGTCTGCAGGAAGGCAGGCAAAATTAGAGACATGTGGGCCTaGCTGCCACTCTGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: HFNLIPKPAQVCRKAGKIRDMWA*LPLCPL
Trigger: CAGAGGGCAGAGTGGCAGCCAGGCCCACATGTCTCT...AATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGGAATGAGGTTAAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTACCCCCTTCGTCGTCACACATaGTGTGAACAGCATATTCGC +
Preference number: 4 (lower is better)
Translates to: LSHQAPGCSTFCRVGFYPLRRHT*CEQHIR
Trigger: GCGAATATGCTGTTCACATCATGTGTGACGACGAAG...GGGGTAAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GCCGGGATGGTCTCGTGTGGTGATTCTGCAAGAAATAATCACCAGAGCGAGGGGCTTCGTCGTCACACATaGTGTGAACAGCATATTCGC +
Preference number: 4 (lower is better)
Translates to: AGMVSCGDSARNNHQSEGLRRHT*CEQHIR
Trigger: GCGAATATGCTGTTCACATCATGTGTGACGACGAAG...CCCCTCGCTCTGGTGATTATTTCTTGCAGAATCACCACACGAGACCATCCCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCATGTACGGGCTGTCCTTaGTGTCTTCGTCGTCACACA +
Preference number: 4 (lower is better)
Translates to: PDHTTHLGSGNVPDTLTSCTGCP*CLRRHT
Trigger: TGTGTGACGACGAAGACATCAAGGACAGCCCGTACA...TGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGAAACACTTTGACCTTCTaGGGATGGCTACCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: QWLVCSTKSSGLHLVYSGNTLTF*GWLPCP
Trigger: CGGGCAAGGTAGCCATCCTCAGAAGGTCAAAGTGTT...TCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCACTGGCCCAAACACTTTaGCCTTCTGAGGATGGCTAC +
Preference number: 4 (lower is better)
Translates to: PDHTTHLGSGNVPDTLTSLAQTL*PSEDGY
Trigger: GTAGCCATCCTCAGAAGGTCAAAGTGTTTGGGCCAG...TGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TCATTCCAAAGCCAGCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCCCTGGTATCAACGGTaGACTCCTGATCCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: SFQSQLRSAGRQAKFPTPPWYQR*TPDPSQ
Trigger: TTGGGAAGGATCAGGAGTTCACCGTTGATACCAGGG...AGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGGAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTCTTCAAAGAGGATGTTaGCGAAGTACTCCCCGGGTT +
Preference number: 4 (lower is better)
Translates to: WSFHIRLRAVPLSVGWAFLQRGC*RSTPRV
Trigger: AACCCGGGGAGTACTTCGTCAACATCCTCTTTGAAG...AAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp AGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGTGACCGGCGGGCTCCACCTTaGCCCGGGCGGGGAAGTGTG +
Preference number: 4 (lower is better)
Translates to: RSFILSCLYRSLFSRKSDRRAPP*PGRGSV
Trigger: CACACTTCCCCGCCCGGGTCAAGGTGGAGCCCGCCG...GTCACTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp ATTCTCCAATATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTCTCGGTGGAGGCCCCTaGGGGGTTGGCAATGTGGGC +
Preference number: 4 (lower is better)
Translates to: ILQYVPQESSLGLISEGILGGGP*GVGNVG
Trigger: GCCCACATTGCCAACCCCTCAGGGGCCTCCACCGAG...AATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATATTGGAGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp AAGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCTGCTGCTGTCCACCGTaGAGGACTGCAGGACACGGG +
Preference number: 4 (lower is better)
Translates to: KSSPLPNDNQTRCPLFLCCCCPP*RTAGHG
Trigger: CCCGTGTCCTGCAGTCCTTCACGGTGGACAGCAGCA...GCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TCACCAGAGCGAGGGGACAGGTACTTGAGAGACATGTGGGCCTGGCTGCCACTCACATATCACTGCTGTTaGTTTCTGGGATTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: SPERGDRYLRDMWAWLPLTYHCC*FLGFSG
Trigger: ACCTGAAAATCCCAGAAATCAACAGCAGTGATATGT...GAGTGGCAGCCAGGCCCACATGTCTCTCAAGTACCTGTCCCCTCGCTCTGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp AGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCCCCCAACGCGCACTTTaGAGGGGCTTCCAACCACGT +
Preference number: 4 (lower is better)
Translates to: SHLLCQMTTKLGVPFFSAPQRAL*RGFQPR
Trigger: ACGTGGTTGGAAGCCCCTTCAAAGTGCGCGTTGGGG...GGCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCCACCCCAACGCGCACTTTaGAGGGGCTTCCAACCACGT +
Preference number: 4 (lower is better)
Translates to: SSPLPNDNQTRCPLFLCPPQRAL*RGFQPR
Trigger: ACGTGGTTGGAAGCCCCTTCAAAGTGCGCGTTGGGG...TGGGCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TACCCCCAACACTCGCCCCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTATCTTCTCAGCCCCCTaGACAAGCTTGCATTTCTTA +
Preference number: 4 (lower is better)
Translates to: YPQHSPQILHLPQEWPLPIFSAP*TSLHFL
Trigger: TAAGAAATGCAAGCTTGTTCAGGGGGCTGAGAAGAT...AGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGGGCGAGTGTTGGGGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp AGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCTGGGGGTGTTGGCGATaGGGAGCGGTAAAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: SHLLCQMTTKLGVPFFSAWGCWR*GAVKQC
Trigger: GCACTGCTTTACCGCTCCTCATCGCCAACACCCCCA...GGCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTACTAAAGCAAAACCATaGCTGCCGGGATGGTCTCGT +
Preference number: 4 (lower is better)
Translates to: WSFHIRLRAVPLSVGWAFTKAKP*LPGWSR
Trigger: ACGAGACCATCCCGGCAGTCATGGTTTTGCTTTAGT...AAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAAACCTAAGAAAAAGTGACCCATaGAGTTGGCTGGGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: YYTCHKSGHFLRTKQQNLRKSDP*SWLGRV
Trigger: CACCCGCCCCAGCCAACTTCATGGGTCACTTTTTCT...TAGGTTTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCAGAAAAAGTGACCCATaGAGTTGGCTGGGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: AQVCRKAGKIPYTSFLDFRKSDP*SWLGRV
Trigger: CACCCGCCCCAGCCAACTTCATGGGTCACTTTTTCT...GAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp ATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGAATTTTCCAGAAAAAGTaGCCCATGAAGTTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: MKLAGAGVECYVMGRTLGIFQKK*PMKLAG
Trigger: CCCAGCCAACTTCATGGGTCACTTTTTCTGGAAAAT...TCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAGCCAACTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTCTCAGGCAACGTCCCTaGCACTTTAACCTCATTCCA +
Preference number: 4 (lower is better)
Translates to: WSFHIRLRAVPLSVGWAFLRQRP*HFNLIP
Trigger: TGGAATGAGGTTAAAGTGTCAGGGACGTTGCCTGAG...AAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp GCCGGGATGGTCTCGTGTGGTGATTCTGCAAGAAATAATCACCAGAGCGAGGGGCATCCACAATGGCTTTaGTATCGATGGACACGAGCT +
Preference number: 4 (lower is better)
Translates to: AGMVSCGDSARNNHQSEGHPQWL*YRWTRA
Trigger: AGCTCGTGTCCATCGATAGCAAAGCCATTGTGGATG...CCCCTCGCTCTGGTGATTATTTCTTGCAGAATCACCACACGAGACCATCCCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp GTGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTCATCCACAATGGCTTTaGTATCGATGGACACGAGCT +
Preference number: 4 (lower is better)
Translates to: VVLSHQAPGCSTFCRVGFHPQWL*YRWTRA
Trigger: AGCTCGTGTCCATCGATAGCAAAGCCATTGTGGATG...AAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TTTGGCTTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCAGGGCTTTGCCGTCTTaGCAGTTCTGGTTAAAGTTG +
Preference number: 4 (lower is better)
Translates to: FGFRVPAYNTRGPFTSGSRALPS*QFWLKL
Trigger: CAACTTTAACCAGAACTGGCAAGACGGCAAAGCCCT...GGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAAGCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAAACCTATGGGCTCGATTCCTCTaGCATAGGCCCTGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: YYTCHKSGHFLRTKQQNLWARFL*HRPWLS
Trigger: AGAAAGCCAGGGCCTATGGCAGAGGAATCGAGCCCA...TAGGTTTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATGGGCTCGATTCCTCTaGCATAGGCCCTGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: PTFRPKTRRSFILSCLYRWARFL*HRPWLS
Trigger: AGAAAGCCAGGGCCTATGGCAGAGGAATCGAGCCCA...TCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAACAGGCTTCCCCAACCTaGACAACGAAGGGACTCTTA +
Preference number: 4 (lower is better)
Translates to: PDTTPATRVATSSGLSSKQASPT*TTKGLL
Trigger: TAAGAGTCCCTTCGTTGTGCAGGTTGGGGAAGCCTG...TTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGAGAGCTCCCCACTTCCTaGAGCTTTGGTGTCAACCTT +
Preference number: 4 (lower is better)
Translates to: QWLVCSTKSSGLHLVYSGELPTS*SFGVNL
Trigger: AAGGTTGACACCAAAGCTGCAGGAAGTGGGGAGCTC...TCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CCAGAAAAAGTGACCCATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATCAAACCTGGCCCGTATaGTCGAACCAGATCAGGGTT +
Preference number: 4 (lower is better)
Translates to: PEKVTHEVGWGGCGVLCHQTWPV*SNQIRV
Trigger: AACCCTGATCTGGTTCGAGCATACGGGCCAGGTTTG...ATGACATAACACTCCACACCCGCCCCAGCCAACTTCATGGGTCACTTTTTCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TGTTCCTGGTCTGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTCATCTGGATGTCAATaGGTTGGCCTTCCCCATCCT +
Preference number: 4 (lower is better)
Translates to: CSWSVCCSGWSVPPRVLVSSGCQ*VGLPHP
Trigger: AGGATGGGGAAGGCCAACGCATTGACATCCAGATGA...AACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACAGACCAGGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TTTGGCTTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCATGAGCATGCATATGTaGCGTCCATCCGGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: FGFRVPAYNTRGPFTSGSMSMHM*RPSGSS
Trigger: TGAAGAACCGGATGGACGGCACATATGCATGCTCAT...GGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAAGCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp GTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTAAAGCAGTGGTGTGTAGGTTCATTTaGCTTCAGACCACTTCTCTC +
Preference number: 4 (lower is better)
Translates to: VRRPQSMGVLAMRSGKAVVCRFI*LQTTSL
Trigger: GAGAGAAGTGGTCTGAAGGCAAATGAACCTACACAC...CACTGCTTTACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGATCGTAATCCCCCGGTaGGAAAGGAATGTACTCAGC +
Preference number: 4 (lower is better)
Translates to: CLLQWLVCSTKSSGLHLVIVIPR*ERNVLS
Trigger: GCTGAGTACATTCCTTTCGCACCGGGGGATTACGAT...CACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TGTTCCTGGTCTGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTATCGTAATCCCCCGGTaGGAAAGGAATGTACTCAGC +
Preference number: 4 (lower is better)
Translates to: CSWSVCCSGWSVPPRVLVIVIPR*ERNVLS
Trigger: GCTGAGTACATTCCTTTCGCACCGGGGGATTACGAT...AACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACAGACCAGGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp GCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCCTGGGGTCAGAACCGTaGAGGTCACTTTACCCTTCC +
Preference number: 4 (lower is better)
Translates to: AQVCRKAGKIPYTSFLDFLGSEP*RSLYPS
Trigger: GGAAGGGTAAAGTGACCTGCACGGTTCTGACCCCAG...GAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAACAGACCACCTTCTCCTaGATCCTCTGTGACGATGGT +
Preference number: 4 (lower is better)
Translates to: PDTTPATRVATSSGLSSKQTTFS*ILCDDG
Trigger: ACCATCGTCACAGAGGATGCAGGAGAAGGTGGTCTG...TTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TGGGACGGACCTTGGGATGAGGGCGTTAATCCATGGGCCCCTCTGAGATCACTTGCAGGTAGGTCACTGTaGATGTCCCATCTTTATTGT +
Preference number: 4 (lower is better)
Translates to: WDGPWDEGVNPWAPLRSLAGRSL*MSHLYC
Trigger: ACAATAAAGATGGGACATGCACAGTGACCTACCTGC...AAGTGATCTCAGAGGGGCCCATGGATTAACGCCCTCATCCCAAGGTCCGTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp GTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTAAAGCAGTGGCAGGTAGGTCACTGTaGATGTCCCATCTTTATTGT +
Preference number: 4 (lower is better)
Translates to: VRRPQSMGVLAMRSGKAVAGRSL*MSHLYC
Trigger: ACAATAAAGATGGGACATGCACAGTGACCTACCTGC...CACTGCTTTACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CCAGAAAAAGTGACCCATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATGCTCCAGAGGGGCTGTaGACCTTTGCATCAATCTTG +
Preference number: 4 (lower is better)
Translates to: PEKVTHEVGWGGCGVLCHAPEGL*TFASIL
Trigger: CAAGATTGATGCAAAGGTGCACAGCCCCTCTGGAGC...ATGACATAACACTCCACACCCGCCCCAGCCAACTTCATGGGTCACTTTTTCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TCCCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACACCACCAATAAGCTGCTaGCCTTCTCTCCCCCAACCA +
Preference number: 4 (lower is better)
Translates to: SQLSGQRPAGVSFCPVCTPPISC*PSLPQP
Trigger: TGGTTGGGGGAGAGAAGGGCAGCAGCTTATTGGTGG...TGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TCTGCCTGCCCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTCATTTCTGGATTTCTaGACCACACAGCTCTCACTG +
Preference number: 4 (lower is better)
Translates to: SACPDHTTHLGSGNVPDTSFLDF*TTQLSL
Trigger: CAGTGAGAGCTGTGTGGTGCAGAAATCCAGAAATGA...AGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGGGCAGGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GCCGGGATGGTCTCGTGTGGTGATTCTGCAAGAAATAATCACCAGAGCGAGGGGAGTAGGTGGGCTTATTaGCGATGTTCCCTACAGCTT +
Preference number: 4 (lower is better)
Translates to: AGMVSCGDSARNNHQSEGSRWAY*RCSLQL
Trigger: AAGCTGTAGGGAACATCGCCAATAAGCCCACCTACT...CCCCTCGCTCTGGTGATTATTTCTTGCAGAATCACCACACGAGACCATCCCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp AAGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCCTCCCGTGGCTGGGTaGATGAAGGCCATGTACGGG +
Preference number: 4 (lower is better)
Translates to: KSSPLPNDNQTRCPLFLCPPVAG*MKAMYG
Trigger: CCCGTACATGGCCTTCATCCACCCAGCCACGGGAGG...GCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp ACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCATTCCAAAGCGTAGCCTCCCGTGGCTaGGTGGATGAAGGCCATGTA +
Preference number: 4 (lower is better)
Translates to: TTHLGSGNVPDTLTSFQSVASRG*VDEGHV
Trigger: TACATGGCCTTCATCCACCCAGCCACGGGAGGCTAC...GCTTTGGAATGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCAGAAAAAGTGACCCATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATTGCTTTGCTGAGCCCTaGGCCTTCTGCCTTCACTTT +
Preference number: 4 (lower is better)
Translates to: PEKVTHEVGWGGCGVLCHCFAEP*AFCLHF
Trigger: AAAGTGAAGGCAGAAGGCCCAGGGCTCAGCAAAGCA...ATGACATAACACTCCACACCCGCCCCAGCCAACTTCATGGGTCACTTTTTCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CTTCTCAGCCCCCTGAACAAGCTTGCATTTCTTAAGATTCTCCAATATGTCCCTGGGCCTTCACCTTGCTaGGATCTGGTGGCAGCGAGG +
Preference number: 4 (lower is better)
Translates to: LLSPLNKLAFLKILQYVPGPSPC*DLVAAR
Trigger: CCTCGCTGCCACCAGATCCCAGCAAGGTGAAGGCCC...AGGGACATATTGGAGAATCTTAAGAAATGCAAGCTTGTTCAGGGGGCTGAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGATCTTCACTCCCCGGGTTTTGTaGGAAGGTAAGAGACGGAGC +
Preference number: 4 (lower is better)
Translates to: AGLFHQEFWFAPSVLRIFTPRVL*EGKRRS
Trigger: GCTCCGTCTCTTACCTTCCCACAAAACCCGGGGAGT...GAAGATCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TTTGGCTTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCGGAGACCCAGGTATGTaGACTTCTTCAAAGAGGATG +
Preference number: 4 (lower is better)
Translates to: FGFRVPAYNTRGPFTSGSGDPGM*TSSKRM
Trigger: CATCCTCTTTGAAGAAGTCCACATACCTGGGTCTCC...GGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAAGCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCCTCTGAGATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCGAGGGGTTGGCAATGTaGGCCTTGATGTGGTCACCC +
Preference number: 4 (lower is better)
Translates to: PSEITLNILVRLPRLMKGEGLAM*ALMWSP
Trigger: GGGTGACCACATCAAGGCCCACATTGCCAACCCCTC...GCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGATCTCAGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCAGAAAAAGTGACCCATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATTTCAATCCAGGTCCTTaGGCTTGCACCCTAGATGGC +
Preference number: 4 (lower is better)
Translates to: PEKVTHEVGWGGCGVLCHFNPGP*ACTLDG
Trigger: GCCATCTAGGGTGCAAGCCCAAGGACCTGGATTGAA...ATGACATAACACTCCACACCCGCCCCAGCCAACTTCATGGGTCACTTTTTCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCATTCAATCCAGGTCCTTaGGCTTGCACCCTAGATGGC +
Preference number: 4 (lower is better)
Translates to: PDHTTHLGSGNVPDTLTSFNPGP*ACTLDG
Trigger: GCCATCTAGGGTGCAAGCCCAAGGACCTGGATTGAA...TGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCAAGTCCACAGGTAGACTaGCAGGCACACCATAGGAAC +
Preference number: 4 (lower is better)
Translates to: PDHTTHLGSGNVPDTLTSSPQVD*QAHHRN
Trigger: GTTCCTATGGTGTGCCTGCCAGTCTACCTGTGGACT...TGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCCATCACCCGTCTGTGTaGCTCGGATGCGATAAGGAG +
Preference number: 4 (lower is better)
Translates to: AQVCRKAGKIPYTSFLDFHHPSV*LGCDKE
Trigger: CTCCTTATCGCATCCGAGCCACACAGACGGGTGATG...GAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACACAGCTCGCCAGTTTTCACAGTaGAGGCGATTCCAGGACCCG +
Preference number: 4 (lower is better)
Translates to: EGRQNSLHLISGFLHHTARQFSQ*RRFQDP
Trigger: CGGGTCCTGGAATCGCCTCCACTGTGAAAACTGGCG...AGCTGTGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTGGAGCGTGTGTTGATGTGCATCTCATaGAGCCCGACCTCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: HFKHFGKTAQADEGLERVLMCIS*SPTSVG
Trigger: CCCCACTGAGGTCGGGCTCCATGAGATGCACATCAA...CACACGCTCCAGCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TCATTCCAAAGCCAGCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTAGGTGGCAGTTTTGTTaGCCACTCCATACACGAGGC +
Preference number: 4 (lower is better)
Translates to: SFQSQLRSAGRQAKFPTPRWQFC*PLHTRG
Trigger: GCCTCGTGTATGGAGTGGCCAACAAAACTGCCACCT...AGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGGAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTAAGGAGATGCCAATGTaGTTGTTGGGCAGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: WSFHIRLRAVPLSVGWAFKEMPM*LLGSLF
Trigger: GAAGAGGCTGCCCAACAACCACATTGGCATCTCCTT...AAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTCACCAATCTCCGACTaGACCACCATGATAGACACG +
Preference number: 4 (lower is better)
Translates to: CLLQWLVCSTKSSGLHLVSPISD*TTMIDT
Trigger: CGTGTCTATCATGGTGGTCCAGTCGGAGATTGGTGA...CACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TTTGGCTTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCGCTCGTCAGCGAATTTaGTGGAGACGATATAAACCC +
Preference number: 4 (lower is better)
Translates to: FGFRVPAYNTRGPFTSGSARQRI*WRRYKP
Trigger: GGGTTTATATCGTCTCCACCAAATTCGCTGACGAGC...GGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAAGCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGATCTTCGATCTTCACGGTAAATaGGCTCCCAGGCACGTGCTC +
Preference number: 4 (lower is better)
Translates to: AGLFHQEFWFAPSVLRIFDLHGK*APRHVL
Trigger: GAGCACGTGCCTGGGAGCCCATTTACCGTGAAGATC...GAAGATCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp AAGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCTGCACGCCCATCTCCTaGGGCACAAACCGGACGCAG +
Preference number: 4 (lower is better)
Translates to: KSSPLPNDNQTRCPLFLCCTPIS*GTNRTQ
Trigger: CTGCGTCCGGTTTGTGCCCCAGGAGATGGGCGTGCA...GCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGATGAGGGCGTTCACGACCCATTTTTATaGTCATCGAATGTAATCTCG +
Preference number: 4 (lower is better)
Translates to: LGRVWSVMSWDGPWDEGVHDPFL*SSNVIS
Trigger: CGAGATTACATTCGATGACCATAAAAATGGGTCGTG...AACGCCCTCATCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GGAAACTGCTCGCCACTGCAGAATTTCTTCAGACCAAGGAAGGGACTGAAACGGGGGCTTCCAACCACGTaGCTCCCATTGAACTTGACA +
Preference number: 4 (lower is better)
Translates to: GNCSPLQNFFRPRKGLKRGLPTT*LPLNLT
Trigger: TGTCAAGTTCAATGGGAGCCACGTGGTTGGAAGCCC...CCGTTTCAGTCCCTTCCTTGGTCTGAAGAAATTCTGCAGTGGCGAGCAGTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCAGAAAAAGTGACCCATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATGGGCTTCCAACCACGTaGCTCCCATTGAACTTGACA +
Preference number: 4 (lower is better)
Translates to: PEKVTHEVGWGGCGVLCHGLPTT*LPLNLT
Trigger: TGTCAAGTTCAATGGGAGCCACGTGGTTGGAAGCCC...ATGACATAACACTCCACACCCGCCCCAGCCAACTTCATGGGTCACTTTTTCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCACGATCAGCAGCATGTTaGAGCCAGCTTTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: PDHTTHLGSGNVPDTLTSRSAAC*SQLCCS
Trigger: ACTGCAGCAAAGCTGGCTCCAACATGCTGCTGATCG...TGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCAGTCTGCTGCAGTGGCTaGTCTGTTCCACCAAGAGTT +
Preference number: 4 (lower is better)
Translates to: PDHTTHLGSGNVPDTLTSVCCSG*SVPPRV
Trigger: AACTCTTGGTGGAACAGACCAGCCACTGCAGCAGAC...TGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TCATTCCAAAGCCAGCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTGTCTGCTGCAGTGGCTaGTCTGTTCCACCAAGAGTT +
Preference number: 4 (lower is better)
Translates to: SFQSQLRSAGRQAKFPTPVCCSG*SVPPRV
Trigger: AACTCTTGGTGGAACAGACCAGCCACTGCAGCAGAC...AGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGGAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGAGTCTCATTGTGTTCCTaGTCTGTCTGCTGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: QWLVCSTKSSGLHLVYSGVSLCS*SVCCSG
Trigger: GCCACTGCAGCAGACAGACCAGGAACACAATGAGAC...TCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCCTCTGAGATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTGGCTGGGGCGGGTGTaGAGTGTTATGTCATGGGAC +
Preference number: 4 (lower is better)
Translates to: PSEITLNILVRLPRLMKGWLGRV*SVMSWD
Trigger: GTCCCATGACATAACACTCCACACCCGCCCCAGCCA...GCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGATCTCAGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTTGGCTGGGGCGGGTGTaGAGTGTTATGTCATGGGAC +
Preference number: 4 (lower is better)
Translates to: LRSAGRQAKFPTPHFWISWLGRV*SVMSWD
Trigger: GTCCCATGACATAACACTCCACACCCGCCCCAGCCA...AGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TCATTCCAAAGCCAGCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTACCACACTACACATTTaGGCTCAGGCAACGTCCCTG +
Preference number: 4 (lower is better)
Translates to: SFQSQLRSAGRQAKFPTPTTLHI*AQATSL
Trigger: CAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGT...AGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGGAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CCCTCTGAGATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCCTTTGTGTAGCCCGGTaGCCTTGGGCAGATACTCCA +
Preference number: 4 (lower is better)
Translates to: PSEITLNILVRLPRLMKGLCVAR*PWADTP
Trigger: TGGAGTATCTGCCCAAGGTCACCGGGCTACACAAAG...GCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGATCTCAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGATGAGGGCGTTGTATCATTGGCATTGTaGATAATGTCAAAATCCACG +
Preference number: 4 (lower is better)
Translates to: LGRVWSVMSWDGPWDEGVVSLAL*IMSKST
Trigger: CGTGGATTTTGACATTATTCACAATGCCAATGATAC...AACGCCCTCATCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCAACGGTGAACTCCTaGTCCTTCCCAACTTCCACC +
Preference number: 4 (lower is better)
Translates to: PTFRPKTRRSFILSCLYRSTVNS*SFPTST
Trigger: GGTGGAAGTTGGGAAGGATCAGGAGTTCACCGTTGA...TCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp AAGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCCTCCTCCCGAGGGATaGACTTGGCCGTGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: KSSPLPNDNQTRCPLFLCPPPEG*TWPCCS
Trigger: AGAACAGCACGGCCAAGTTCATCCCTCGGGAGGAGG...GCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CCCTCTGAGATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCCTTTGGTATCGATGGTaGACTCGGCAGGCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: PSEITLNILVRLPRLMKGLWYRW*TRQACP
Trigger: TGGGCAAGCCTGCCGAGTTCACCATCGATACCAAAG...GCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGATCTCAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACACTTTGGTATCGATGGTaGACTCGGCAGGCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: CRKAGKIPYTSFLDFCTTLWYRW*TRQACP
Trigger: TGGGCAAGCCTGCCGAGTTCACCATCGATACCAAAG...TGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CCCTCTGAGATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCCTGGTCCAAAGACTTTaGTCCTGCTGGTGTCCACGG +
Preference number: 4 (lower is better)
Translates to: PSEITLNILVRLPRLMKGLVQRL*SCWCPR
Trigger: CCGTGGACACCAGCAGGATCAAAGTCTTTGGACCAG...GCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGATCTCAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GGAAACTGCTCGCCACTGCAGAATTTCTTCAGACCAAGGAAGGGACTGAAACGGTCTTGGTCCGTTATTTaGACAGCAAGCAGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: GNCSPLQNFFRPRKGLKRSWSVI*TASRPS
Trigger: GGAAGGCCTGCTTGCTGTTCAAATAACGGACCAAGA...CCGTTTCAGTCCCTTCCTTGGTCTGAAGAAATTCTGCAGTGGCGAGCAGTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACGGCTGCCCATGTATTTaGTGTGCATCTCATGGAGCC +
Preference number: 4 (lower is better)
Translates to: GLQEGRQNSLHLISGFLHGCPCI*CASHGA
Trigger: GGCTCCATGAGATGCACATCAAATACATGGGCAGCC...GTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp AAGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCAGGAAGTCAGCGGCTaGGCCCAACTTCACCTGGGA +
Preference number: 4 (lower is better)
Translates to: KSSPLPNDNQTRCPLFLCQEVSG*AQLHLG
Trigger: TCCCAGGTGAAGTTGGGCTCAGCCGCTGACTTCCTG...GCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CCCAACACTCGCCCCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACATATCACTGCTGTTaGTTTCTGGGATTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: PNTRPRYYTCHKSGHFLRTYHCC*FLGFSG
Trigger: ACCTGAAAATCCCAGAAATCAACAGCAGTGATATGT...CCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGGGCGAGTGTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TCTGCCTGCCCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTGTTTCATAAATGCTaGAGAGTGAACCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: SACPDHTTHLGSGNVPDTLFHKC*RVNQQL
Trigger: GAGCTGCTGGTTCACTCTTCAGCATTTATGAAACAA...AGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGGGCAGGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GGAAACTGCTCGCCACTGCAGAATTTCTTCAGACCAAGGAAGGGACTGAAACGGACTAAAGCAAAACCATaGCTGCCGGGATGGTCTCGT +
Preference number: 4 (lower is better)
Translates to: GNCSPLQNFFRPRKGLKRTKAKP*LPGWSR
Trigger: ACGAGACCATCCCGGCAGTCATGGTTTTGCTTTAGT...CCGTTTCAGTCCCTTCCTTGGTCTGAAGAAATTCTGCAGTGGCGAGCAGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TACCCCCAACACTCGCCCCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTATCCATGGGCCCCTCTaGGATCACTTTAAACATTTT +
Preference number: 4 (lower is better)
Translates to: YPQHSPQILHLPQEWPLPIHGPL*DHFKHF
Trigger: AAAATGTTTAAAGTGATCTCAGAGGGGCCCATGGAT...AGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGGGCGAGTGTTGGGGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GCCGGGATGGTCTCGTGTGGTGATTCTGCAAGAAATAATCACCAGAGCGAGGGGATTTTCCAGAAAAAGTaGCCCATGAAGTTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: AGMVSCGDSARNNHQSEGIFQKK*PMKLAG
Trigger: CCCAGCCAACTTCATGGGTCACTTTTTCTGGAAAAT...CCCCTCGCTCTGGTGATTATTTCTTGCAGAATCACCACACGAGACCATCCCGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGCATCCACAATGGCTTTaGTATCGATGGACACGAGCT +
Preference number: 4 (lower is better)
Translates to: CLLQWLVCSTKSSGLHLVHPQWL*YRWTRA
Trigger: AGCTCGTGTCCATCGATAGCAAAGCCATTGTGGATG...CACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp AAGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCACCATCACGTCTCCTTaGCCGGCGCTGATGGTGTCC +
Preference number: 4 (lower is better)
Translates to: KSSPLPNDNQTRCPLFLCTITSP*PALMVS
Trigger: GGACACCATCAGCGCCGGGCAAGGAGACGTGATGGT...GCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGAGTCAGGGGTCACTTGTaGCTCCTCTTTGTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: PTFRPKTRRSFILSCLYRVRGHL*LLFVPF
Trigger: GAAGGGAACAAAGAGGAGGCACAAGTGACCCCTGAC...TCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp GCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCCAGGCTTCCCCAACCTaGACAACGAAGGGACTCTTA +
Preference number: 4 (lower is better)
Translates to: AQVCRKAGKIPYTSFLDFQASPT*TTKGLL
Trigger: TAAGAGTCCCTTCGTTGTGCAGGTTGGGGAAGCCTG...GAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp GGAAACTGCTCGCCACTGCAGAATTTCTTCAGACCAAGGAAGGGACTGAAACGGTCATCTGGATGTCAATaGGTTGGCCTTCCCCATCCT +
Preference number: 4 (lower is better)
Translates to: GNCSPLQNFFRPRKGLKRSSGCQ*VGLPHP
Trigger: AGGATGGGGAAGGCCAACGCATTGACATCCAGATGA...CCGTTTCAGTCCCTTCCTTGGTCTGAAGAAATTCTGCAGTGGCGAGCAGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp ACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCATTCCAAAGCAGAGGGCTGTTGAACTaGACGTTGAGCGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: TTHLGSGNVPDTLTSFQSRGLLN*TLSGAF
Trigger: GAAAGCCCCGCTCAACGTGCAGTTCAACAGCCCTCT...GCTTTGGAATGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCAGCTCAGATCCAGCGGTaGAGCAACACCCACAGTGAA +
Preference number: 4 (lower is better)
Translates to: SAGRQAKFPTPHFWISAPAQIQR*SNTHSE
Trigger: TTCACTGTGGGTGTTGCTGCACCGCTGGATCTGAGC...TGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp ACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCATTCCAAAGCGCTCAGATCCAGCGGTaGAGCAACACCCACAGTGAA +
Preference number: 4 (lower is better)
Translates to: TTHLGSGNVPDTLTSFQSAQIQR*SNTHSE
Trigger: TTCACTGTGGGTGTTGCTGCACCGCTGGATCTGAGC...GCTTTGGAATGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp AGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCAAAGCCCACCAATTCCTaGGCCTCTGGTAACCACGGT +
Preference number: 4 (lower is better)
Translates to: RSAGRQAKFPTPHFWISAKPTNS*ASGNHG
Trigger: ACCGTGGTTACCAGAGGCGCAGGAATTGGTGGGCTT...TGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCAGTCCCTCAACAGTTATaGCAAGCCCACCAATTCCTG +
Preference number: 4 (lower is better)
Translates to: PDHTTHLGSGNVPDTLTSVPQQL*QAHQFL
Trigger: CAGGAATTGGTGGGCTTGGCATAACTGTTGAGGGAC...TGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CCAGAAAAAGTGACCCATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATGTCCCTCAACAGTTATaGCAAGCCCACCAATTCCTG +
Preference number: 4 (lower is better)
Translates to: PEKVTHEVGWGGCGVLCHVPQQL*QAHQFL
Trigger: CAGGAATTGGTGGGCTTGGCATAACTGTTGAGGGAC...ATGACATAACACTCCACACCCGCCCCAGCCAACTTCATGGGTCACTTTTTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TGTTCCTGGTCTGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTCACTGGCAGTCACTTTaGTGGCATCATATGTGGGAA +
Preference number: 4 (lower is better)
Translates to: CSWSVCCSGWSVPPRVLVHWQSL*WHHMWE
Trigger: TTCCCACATATGATGCCAGCAAAGTGACTGCCAGTG...AACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACAGACCAGGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACACTGGGGTCAGAACCGTaGAGGTCACTTTACCCTTCC +
Preference number: 4 (lower is better)
Translates to: CRKAGKIPYTSFLDFCTTLGSEP*RSLYPS
Trigger: GGAAGGGTAAAGTGACCTGCACGGTTCTGACCCCAG...TGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCACATAGATCACATATGTaGCCGGCTTGGCAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: PDHTTHLGSGNVPDTLTSHRSHM*PAWQLC
Trigger: ACACAGCTGCCAAGCCGGGCACATATGTGATCTATG...TGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGACAGACCACCTTCTCCTaGATCCTCTGTGACGATGGT +
Preference number: 4 (lower is better)
Translates to: PTFRPKTRRSFILSCLYRQTTFS*ILCDDG
Trigger: ACCATCGTCACAGAGGATGCAGGAGAAGGTGGTCTG...TCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp GAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACACAGCTCCACCGCCAAGGATATaGCACCATAACCTGCATCCC +
Preference number: 4 (lower is better)
Translates to: EGRQNSLHLISGFLHHTAPPPRI*HHNLHP
Trigger: GGGATGCAGGTTATGGTGGCATATCCTTGGCGGTGG...AGCTGTGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp AAGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCGGGCTCCCAGGCACGTaGTCGTCAGCGAATTTGGTG +
Preference number: 4 (lower is better)
Translates to: KSSPLPNDNQTRCPLFLCGLPGT*SSANLV
Trigger: CACCAAATTCGCTGACGAGCACGTGCCTGGGAGCCC...GCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp ATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTGGAGCGTGCATGGGCACAATCTCTaGCTCAGTCACACGGCCAGA +
Preference number: 4 (lower is better)
Translates to: ITLNILVRLPRLMKGWSVHGHNL*LSHTAR
Trigger: TCTGGCCGTGTGACTGAGGCAGAGATTGTGCCCATG...CACGCTCCAGCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CCCAACACTCGCCCCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGATCAATCTTGCCTTTTaGGCCATTCAACCTTATAGC +
Preference number: 4 (lower is better)
Translates to: PNTRPRYYTCHKSGHFLRINLAF*AIQPYS
Trigger: GCTATAAGGTTGAATGGCGCAAAAGGCAAGATTGAT...CCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGGGCGAGTGTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTTTACAACAGCCCCTTCGAGTCCCGTaGCATAGGCGGACACCAGGG +
Preference number: 4 (lower is better)
Translates to: YVPQESSLGLISEGILQQPLRVP*HRRTPG
Trigger: CCCTGGTGTCCGCCTATGGCACGGGACTCGAAGGGG...CTGTTGTAAAATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp ATTCTCCAATATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTCCCCTTCGAGTCCCGTaGCATAGGCGGACACCAGGG +
Preference number: 4 (lower is better)
Translates to: ILQYVPQESSLGLISEGIPLRVP*HRRTPG
Trigger: CCCTGGTGTCCGCCTATGGCACGGGACTCGAAGGGG...AATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATATTGGAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACATCCTGGTCTGTCTGCTaGAGTGGCTGGTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: CRKAGKIPYTSFLDFCTTSWSVC*SGWSVP
Trigger: TGGAACAGACCAGCCACTGCAGCAGACAGACCAGGA...TGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTGGAGCGTGTGAAGCAAAACCATGACTaGCGGGATGGTCTCGTGTGG +
Preference number: 4 (lower is better)
Translates to: HFKHFGKTAQADEGLERVKQNHD*RDGLVW
Trigger: CCACACGAGACCATCCCGGCAGTCATGGTTTTGCTT...CACACGCTCCAGCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGATCACCATGTTTCCAGTaGGCTCGATTCCTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: QWLVCSTKSSGLHLVYSGSPCFQ*ARFLCH
Trigger: ATGGCAGAGGAATCGAGCCCACTGGAAACATGGTGA...TCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGATTACTGGCATCTCCCTaGGCCTTGTCAACACTCACT +
Preference number: 4 (lower is better)
Translates to: QWLVCSTKSSGLHLVYSGLLASP*ALSTLT
Trigger: AGTGAGTGTTGACAAGGCCCAGGGAGATGCCAGTAA...TCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCATTACTGGCATCTCCCTaGGCCTTGTCAACACTCACT +
Preference number: 4 (lower is better)
Translates to: PDHTTHLGSGNVPDTLTSLLASP*ALSTLT
Trigger: AGTGAGTGTTGACAAGGCCCAGGGAGATGCCAGTAA...TGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACACAGCTACGGTGTTCTTCCCCTaGGGATCTTCCACCTCCACA +
Preference number: 4 (lower is better)
Translates to: EGRQNSLHLISGFLHHTATVFFP*GSSTST
Trigger: TGTGGAGGTGGAAGATCCCCAGGGGAAGAACACCGT...AGCTGTGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTGGAGCGTGTGGAGGGCCAGGCTGCATaGGTTTGTACACACATCGAT +
Preference number: 4 (lower is better)
Translates to: HFKHFGKTAQADEGLERVEGQAA*VCTHID
Trigger: ATCGATGTGTGTACAAACCCATGCAGCCTGGCCCTC...CACACGCTCCAGCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTATCTCCCCGGGGTGCTaGGGTAATACTCGAATGCGT +
Preference number: 4 (lower is better)
Translates to: LRSAGRQAKFPTPHFWISISPGC*GNTRMR
Trigger: ACGCATTCGAGTATTACCCCAGCACCCCGGGGAGAT...AGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCAGAAAAAGTGACCCATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATAGATTTCTCCAAACCTaGCCCGTATGCTCGAACCAG +
Preference number: 4 (lower is better)
Translates to: PEKVTHEVGWGGCGVLCHRFLQT*PVCSNQ
Trigger: CTGGTTCGAGCATACGGGCCAGGTTTGGAGAAATCT...ATGACATAACACTCCACACCCGCCCCAGCCAACTTCATGGGTCACTTTTTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACTGCTTTGCTGAGCCCTaGGCCTTCTGCCTTCACTTT +
Preference number: 4 (lower is better)
Translates to: GLQEGRQNSLHLISGFLHCFAEP*AFCLHF
Trigger: AAAGTGAAGGCAGAAGGCCCAGGGCTCAGCAAAGCA...GTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGGGAGACCCAGGTATGTaGACTTCTTCAAAGAGGATG +
Preference number: 4 (lower is better)
Translates to: CLLQWLVCSTKSSGLHLVGDPGM*TSSKRM
Trigger: CATCCTCTTTGAAGAAGTCCACATACCTGGGTCTCC...CACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTGGCAGTCACTTTGCTaGCATCATATGTGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: CLLQWLVCSTKSSGLHLVWQSLC*HHMWEG
Trigger: TCCTTCCCACATATGATGCCAGCAAAGTGACTGCCA...CACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACACATCACCCGTCTGTGTaGCTCGGATGCGATAAGGAG +
Preference number: 4 (lower is better)
Translates to: CRKAGKIPYTSFLDFCTTHHPSV*LGCDKE
Trigger: CTCCTTATCGCATCCGAGCCACACAGACGGGTGATG...TGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTTCCCAGAAGGCATGTaGACCTCTCCAGTGATTTCT +
Preference number: 4 (lower is better)
Translates to: CLLQWLVCSTKSSGLHLVFPEGM*TSPVIS
Trigger: AGAAATCACTGGAGAGGTCCACATGCCTTCTGGGAA...CACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAAAAGGAGATGCCAATGTaGTTGTTGGGCAGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: PDTTPATRVATSSGLSSKKEMPM*LLGSLF
Trigger: GAAGAGGCTGCCCAACAACCACATTGGCATCTCCTT...TTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TCATTCCAAAGCCAGCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTTCACCAATCTCCGACTaGACCACCATGATAGACACG +
Preference number: 4 (lower is better)
Translates to: SFQSQLRSAGRQAKFPTPSPISD*TTMIDT
Trigger: CGTGTCTATCATGGTGGTCCAGTCGGAGATTGGTGA...AGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGGAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACAGATCTTCACGGTAAATaGGCTCCCAGGCACGTGCTC +
Preference number: 4 (lower is better)
Translates to: CRKAGKIPYTSFLDFCTTDLHGK*APRHVL
Trigger: GAGCACGTGCCTGGGAGCCCATTTACCGTGAAGATC...TGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp ATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGAACTGCTGTTGATTTCTaGGATTTTCAGGTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: MKLAGAGVECYVMGRTLGTAVDF*DFQVQV
Trigger: GACCTGAACCTGAAAATCCCAGAAATCAACAGCAGT...TCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAGCCAACTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGGGACGGACCTTGGGATGAGGGCGTTAATCCATGGGCCCCTCTGAGATCACTTACTGCTGTTGATTTCTaGGATTTTCAGGTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: WDGPWDEGVNPWAPLRSLTAVDF*DFQVQV
Trigger: GACCTGAACCTGAAAATCCCAGAAATCAACAGCAGT...AAGTGATCTCAGAGGGGCCCATGGATTAACGCCCTCATCCCAAGGTCCGTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp ATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGAGCAAAGGATGCTGGCTaGTTAACTTTTAATCCCGAT +
Preference number: 4 (lower is better)
Translates to: MKLAGAGVECYVMGRTLGAKDAG*LTFNPD
Trigger: ATCGGGATTAAAAGTTAACCAGCCAGCATCCTTTGC...TCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAGCCAACTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCGGGCTTCCAACCACGTaGCTCCCATTGAACTTGACA +
Preference number: 4 (lower is better)
Translates to: AQVCRKAGKIPYTSFLDFGLPTT*LPLNLT
Trigger: TGTCAAGTTCAATGGGAGCCACGTGGTTGGAAGCCC...GAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTATAAAGAATTCCGACTaGATACCTGTGGTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: WSFHIRLRAVPLSVGWAFIKNSD*IPVVPP
Trigger: AGGGGGCACCACAGGTATCCAGTCGGAATTCTTTAT...AAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGTTCCTGGTCTGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTATAAAGAATTCCGACTaGATACCTGTGGTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: CSWSVCCSGWSVPPRVLVIKNSD*IPVVPP
Trigger: AGGGGGCACCACAGGTATCCAGTCGGAATTCTTTAT...AACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACAGACCAGGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGAAGGATGCCTTGGGAATaGCGCTATAGCAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: PTFRPKTRRSFILSCLYRRMPWE*RYSRSL
Trigger: CAGAGACCTGCTATAGCGCCATTCCCAAGGCATCCT...TCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CACTTTAACCTCATTCCAAAGCCAGCTCAGGTCTGCAGGAAGGCAGGCAAAATTGTCTGTCTGCTGCAGTaGCTGGTCTGTTCCACCAAG +
Preference number: 4 (lower is better)
Translates to: HFNLIPKPAQVCRKAGKIVCLLQ*LVCSTK
Trigger: CTTGGTGGAACAGACCAGCCACTGCAGCAGACAGAC...AATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGGAATGAGGTTAAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGAGAGGGCGTTAATCCATaGGCCCCTCTGAGATCACTT +
Preference number: 4 (lower is better)
Translates to: PTFRPKTRRSFILSCLYREGVNP*APLRSL
Trigger: AAGTGATCTCAGAGGGGCCCATGGATTAACGCCCTC...TCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TCCCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGAGGGCGTTAATCCATaGGCCCCTCTGAGATCACTT +
Preference number: 4 (lower is better)
Translates to: SQLSGQRPAGVSFCPVCTEGVNP*APLRSL
Trigger: AAGTGATCTCAGAGGGGCCCATGGATTAACGCCCTC...TGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGTTCCTGGTCTGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTCCTACACCTCATTTCTaGATTTCTGCACCACACAGC +
Preference number: 4 (lower is better)
Translates to: CSWSVCCSGWSVPPRVLVPTPHF*ISAPHS
Trigger: GCTGTGTGGTGCAGAAATCCAGAAATGAGGTGTAGG...AACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACAGACCAGGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCACCACACTACACATTTaGGCTCAGGCAACGTCCCTG +
Preference number: 4 (lower is better)
Translates to: AQVCRKAGKIPYTSFLDFTTLHI*AQATSL
Trigger: CAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGT...GAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGAAGCTTACAACACCCGTaGTCCTTTCACATCAGGCTC +
Preference number: 4 (lower is better)
Translates to: QWLVCSTKSSGLHLVYSGSLQHP*SFHIRL
Trigger: GAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCT...TCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCTGGACCTTTTGCAGTaGCTTTACTGGCATCTCCCT +
Preference number: 4 (lower is better)
Translates to: GLQEGRQNSLHLISGFLHLDLLQ*LYWHLP
Trigger: AGGGAGATGCCAGTAAAGTCACTGCAAAAGGTCCAG...GTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTGGAGCGTGTGGCTTCAGGGCCAACTTaGACTTCAAAGGGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: HFKHFGKTAQADEGLERVASGPT*TSKGLF
Trigger: AAAGAGCCCCTTTGAAGTTCAAGTTGGCCCTGAAGC...CACACGCTCCAGCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAAACCTATACTCAATCTTTGCCTaGGAGGGGCCTTCAATGGCA +
Preference number: 4 (lower is better)
Translates to: YYTCHKSGHFLRTKQQNLYSIFA*EGPSMA
Trigger: TGCCATTGAAGGCCCCTCTCAGGCAAAGATTGAGTA...TAGGTTTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAAACTCGGCCAGGTTGTTaGCAATGCATCCAGATTTCT +
Preference number: 4 (lower is better)
Translates to: PDTTPATRVATSSGLSSKTRPGC*QCIQIS
Trigger: AGAAATCTGGATGCATTGTCAACAACCTGGCCGAGT...TTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACACAGCTAACACTTTGACCTTCTaGGGATGGCTACCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: EGRQNSLHLISGFLHHTANTLTF*GWLPCP
Trigger: CGGGCAAGGTAGCCATCCTCAGAAGGTCAAAGTGTT...AGCTGTGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CCCTCTGAGATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCCTGGCCCAAACACTTTaGCCTTCTGAGGATGGCTAC +
Preference number: 4 (lower is better)
Translates to: PSEITLNILVRLPRLMKGLAQTL*PSEDGY
Trigger: GTAGCCATCCTCAGAAGGTCAAAGTGTTTGGGCCAG...GCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGATCTCAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CCCTCTGAGATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTCAACGGTGAACTCCTaGTCCTTCCCAACTTCCACC +
Preference number: 4 (lower is better)
Translates to: PSEITLNILVRLPRLMKGSTVNS*SFPTST
Trigger: GGTGGAAGTTGGGAAGGATCAGGAGTTCACCGTTGA...GCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGATCTCAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACATCAACGGTGAACTCCTaGTCCTTCCCAACTTCCACC +
Preference number: 4 (lower is better)
Translates to: CRKAGKIPYTSFLDFCTTSTVNS*SFPTST
Trigger: GGTGGAAGTTGGGAAGGATCAGGAGTTCACCGTTGA...TGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACCCTGGTATCAACGGTaGACTCCTGATCCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: SAGRQAKFPTPHFWISAPPWYQR*TPDPSQ
Trigger: TTGGGAAGGATCAGGAGTTCACCGTTGATACCAGGG...TGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTTGTTGTTCTGAATACTaGCTTCGGCTTTTGTTCCCG +
Preference number: 4 (lower is better)
Translates to: WSFHIRLRAVPLSVGWAFCCSEY*LRLLFP
Trigger: CGGGAACAAAAGCCGAAGTCAGTATTCAGAACAACA...AAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp ACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCATTCCAAAGCTGTCGGGGATGTAGGTaGCAGCATACGTGCCATCTT +
Preference number: 4 (lower is better)
Translates to: TTHLGSGNVPDTLTSFQSCRGCR*QHTCHL
Trigger: AAGATGGCACGTATGCTGTCACCTACATCCCCGACA...GCTTTGGAATGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACACAGCTGGCTGCCCATGTATTTaGTGTGCATCTCATGGAGCC +
Preference number: 4 (lower is better)
Translates to: EGRQNSLHLISGFLHHTAGCPCI*CASHGA
Trigger: GGCTCCATGAGATGCACATCAAATACATGGGCAGCC...AGCTGTGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp AAGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCCACTTCCCGGGGGATaGAGGAGATGCCAATGTGGT +
Preference number: 4 (lower is better)
Translates to: KSSPLPNDNQTRCPLFLCPLPGG*RRCQCG
Trigger: ACCACATTGGCATCTCCTTCATCCCCCGGGAAGTGG...GCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTCCATGGGGGTGTACATaGCTTTGTACCCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: LRSAGRQAKFPTPHFWISPWGCT*LCTLQV
Trigger: CACCTGAAGGGTACAAAGTCATGTACACCCCCATGG...AGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TCCCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGTGAACTTGGCTGGCTaGTTCACCATGTTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: SQLSGQRPAGVSFCPVCTVNLAG*FTMFPV
Trigger: CACTGGAAACATGGTGAAGCAGCCAGCCAAGTTCAC...TGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp ATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTGGAGCGTGGTCAGGGGTCACTTGTaGCTCCTCTTTGTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: ITLNILVRLPRLMKGWSVVRGHL*LLFVPF
Trigger: GAAGGGAACAAAGAGGAGGCACAAGTGACCCCTGAC...CACGCTCCAGCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCCACAAGCACGGACTTTCTaGATACCCGCTTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SSPLPNDNQTRCPLFLCPQARTF*IPASGP
Trigger: TGGCCCTGAAGCGGGTATGCAGAAAGTCCGTGCTTG...TGGGCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp ACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCATTCCAAAGCCAAACCTGGCCCGTATaGTCGAACCAGATCAGGGTT +
Preference number: 4 (lower is better)
Translates to: TTHLGSGNVPDTLTSFQSQTWPV*SNQIRV
Trigger: AACCCTGATCTGGTTCGAGCATACGGGCCAGGTTTG...GCTTTGGAATGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CCAGAAAAAGTGACCCATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATATGAGCATGCATATGTaGCGTCCATCCGGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: PEKVTHEVGWGGCGVLCHMSMHM*RPSGSS
Trigger: TGAAGAACCGGATGGACGGCACATATGCATGCTCAT...ATGACATAACACTCCACACCCGCCCCAGCCAACTTCATGGGTCACTTTTTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCAATGAGCATGCATATGTaGCGTCCATCCGGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: PDHTTHLGSGNVPDTLTSMSMHM*RPSGSS
Trigger: TGAAGAACCGGATGGACGGCACATATGCATGCTCAT...TGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TCCCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAATCCAAATCCTTCACTaGATCGCCAGGAAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: SQLSGQRPAGVSFCPVCTIQILH*IARKRA
Trigger: AGCCCTCTTCCTGGCGATGCAGTGAAGGATTTGGAT...TGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp GCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCATCCAAATCCTTCACTaGATCGCCAGGAAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: AQVCRKAGKIPYTSFLDFIQILH*IARKRA
Trigger: AGCCCTCTTCCTGGCGATGCAGTGAAGGATTTGGAT...GAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGTCACCCACCTTCCCGTaGTCGAGACCTGGCCCCGAT +
Preference number: 4 (lower is better)
Translates to: PQEFHSVLSVQIIIFQKKSPTFP*SRPGPD
Trigger: ATCGGGGCCAGGTCTCGAGCACGGGAAGGTGGGTGA...CTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAAAGGTCACCGCGTAGGTaGCATCTTTGTTGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: PDTTPATRVATSSGLSSKRSPRR*HLCCSE
Trigger: TTCAGAACAACAAAGATGGCACCTACGCGGTGACCT...TTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp GCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCATCGTAATCCCCCGGTaGGAAAGGAATGTACTCAGC +
Preference number: 4 (lower is better)
Translates to: AQVCRKAGKIPYTSFLDFIVIPR*ERNVLS
Trigger: GCTGAGTACATTCCTTTCGCACCGGGGGATTACGAT...GAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCAAGGTTACTGTGTGTGTaGCATCTCCATTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: PDHTTHLGSGNVPDTLTSRLLCV*HLHCPP
Trigger: TGGTGGACAATGGAGATGGCACACACACAGTAACCT...TGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp GGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCATAGATCACATATGTaGCCGGCTTGGCAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: GLQEGRQNSLHLISGFLHHRSHM*PAWQLC
Trigger: ACACAGCTGCCAAGCCGGGCACATATGTGATCTATG...GTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp GGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCCCATGTATTTGATGTaGATCTCATGGAGCCCGACC +
Preference number: 4 (lower is better)
Translates to: GLQEGRQNSLHLISGFLHPMYLM*ISWSPT
Trigger: GGTCGGGCTCCATGAGATGCACATCAAATACATGGG...GTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp ATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTGGAGCGTGCAGACCACCTTCTCCTaGATCCTCTGTGACGATGGT +
Preference number: 4 (lower is better)
Translates to: ITLNILVRLPRLMKGWSVQTTFS*ILCDDG
Trigger: ACCATCGTCACAGAGGATGCAGGAGAAGGTGGTCTG...CACGCTCCAGCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TGTTCCTGGTCTGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTCCTTTGCATCAATCTTaGCTTTTGCGCCATTCAACC +
Preference number: 4 (lower is better)
Translates to: CSWSVCCSGWSVPPRVLVPLHQS*LLRHST
Trigger: GGTTGAATGGCGCAAAAGGCAAGATTGATGCAAAGG...AACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACAGACCAGGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGAGGGGCTGTGCACCTTTaGATCAATCTTGCCTTTTGC +
Preference number: 4 (lower is better)
Translates to: PTFRPKTRRSFILSCLYRGAVHL*INLAFC
Trigger: GCAAAAGGCAAGATTGATGCAAAGGTGCACAGCCCC...TCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp GAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACACAGCTAAGCAAAACCATGACTaGCGGGATGGTCTCGTGTGG +
Preference number: 4 (lower is better)
Translates to: EGRQNSLHLISGFLHHTAKQNHD*RDGLVW
Trigger: CCACACGAGACCATCCCGGCAGTCATGGTTTTGCTT...AGCTGTGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTTCATTTCTGGATTTCTaGACCACACAGCTCTCACTG +
Preference number: 4 (lower is better)
Translates to: WSFHIRLRAVPLSVGWAFSFLDF*TTQLSL
Trigger: CAGTGAGAGCTGTGTGGTGCAGAAATCCAGAAATGA...AAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp GGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCAAAACCTAAAGGTCTaGCTGCCCAGACCACACTAC +
Preference number: 4 (lower is better)
Translates to: GLQEGRQNSLHLISGFLHQNLKV*LPRPHY
Trigger: GTAGTGTGGTCTGGGCAGGCAGACCTTTAGGTTTTG...GTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp GAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACACAGCTCCCAGATACTACACCTaGCACAAGAGTGGCCACTTC +
Preference number: 4 (lower is better)
Translates to: EGRQNSLHLISGFLHHTAPRYYT*HKSGHF
Trigger: GAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGG...AGCTGTGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTTTACAACAGCTCTTCGGTCACCGGTaGCTCCTCCACGGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: YVPQESSLGLISEGILQQLFGHR*LLHGCD
Trigger: GTCACAGCCGTGGAGGAGGCACCGGTGACCGAAGAG...CTGTTGTAAAATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429972.6
CDS-3UTR CCA 90 bp GGAAACTGCTCGCCACTGCAGAATTTCTTCAGACCAAGGAAGGGACTGAAACGGCTTCAAATGGGCTCTTaGAGATGTGCTGTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: GNCSPLQNFFRPRKGLKRLQMGS*RCAVLQ
Trigger: TTGCAGGACAGCACATCTCCAAGAGCCCATTTGAAG...CCGTTTCAGTCCCTTCCTTGGTCTGAAGAAATTCTGCAGTGGCGAGCAGTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp AGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCAGAGGGCCAGGCTGCATaGGTTTGTACACACATCGAT +
Preference number: 4 (lower is better)
Translates to: RSAGRQAKFPTPHFWISAEGQAA*VCTHID
Trigger: ATCGATGTGTGTACAAACCCATGCAGCCTGGCCCTC...TGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTTTACAACAGGTAGGCCTCGGCCACTaGCCCGGCAGGCATTTGGAT +
Preference number: 4 (lower is better)
Translates to: YVPQESSLGLISEGILQQVGLGH*PGRHLD
Trigger: ATCCAAATGCCTGCCGGGCCAGTGGCCGAGGCCTAC...CTGTTGTAAAATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCAGATTTCTCCAAACCTaGCCCGTATGCTCGAACCAG +
Preference number: 4 (lower is better)
Translates to: AQVCRKAGKIPYTSFLDFRFLQT*PVCSNQ
Trigger: CTGGTTCGAGCATACGGGCCAGGTTTGGAGAAATCT...GAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAAACTTCTCTCCACACCTaGCCCAAACACTTTGACCTT +
Preference number: 4 (lower is better)
Translates to: PDTTPATRVATSSGLSSKTSLHT*PKHFDL
Trigger: AAGGTCAAAGTGTTTGGGCCAGGTGTGGAGAGAAGT...TTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGCACCTTGCTGGGATCTaGTGGCAGCGAGGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: PQEFHSVLSVQIIIFQKKHLAGI*WQRGLH
Trigger: GTGGAGGCCTCGCTGCCACCAGATCCCAGCAAGGTG...CTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CACTTTAACCTCATTCCAAAGCCAGCTCAGGTCTGCAGGAAGGCAGGCAAAATTTTCAATCCAGGTCCTTaGGCTTGCACCCTAGATGGC +
Preference number: 4 (lower is better)
Translates to: HFNLIPKPAQVCRKAGKIFNPGP*ACTLDG
Trigger: GCCATCTAGGGTGCAAGCCCAAGGACCTGGATTGAA...AATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGGAATGAGGTTAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp AGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCAAGGTCCCTCCTGAGATaGGGTGTAGGTTACTGTGTG +
Preference number: 4 (lower is better)
Translates to: RSAGRQAKFPTPHFWISARSLLR*GVGYCV
Trigger: CACACAGTAACCTACACCCCATCTCAGGAGGGACCT...TGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAATTCCCAGAAGGCATGTaGACCTCTCCAGTGATTTCT +
Preference number: 4 (lower is better)
Translates to: PDTTPATRVATSSGLSSKFPEGM*TSPVIS
Trigger: AGAAATCACTGGAGAGGTCCACATGCCTTCTGGGAA...TTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACCACAATCTCAGGTGTaGCTGTCTTCCCAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: SAGRQAKFPTPHFWISAPPQSQV*LSSQKA
Trigger: TGCCTTCTGGGAAGACAGCCACACCTGAGATTGTGG...TGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCCTCTGAGATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCCCACAATCTCAGGTGTaGCTGTCTTCCCAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: PSEITLNILVRLPRLMKGPQSQV*LSSQKA
Trigger: TGCCTTCTGGGAAGACAGCCACACCTGAGATTGTGG...GCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGATCTCAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGGGCTCTCAGGGATGTaGCTGCCCATGTATTTGATG +
Preference number: 4 (lower is better)
Translates to: LRSAGRQAKFPTPHFWISGLSGM*LPMYLM
Trigger: CATCAAATACATGGGCAGCCACATCCCTGAGAGCCC...AGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CACTTTAACCTCATTCCAAAGCCAGCTCAGGTCTGCAGGAAGGCAGGCAAAATTGGGCTCTCAGGGATGTaGCTGCCCATGTATTTGATG +
Preference number: 4 (lower is better)
Translates to: HFNLIPKPAQVCRKAGKIGLSGM*LPMYLM
Trigger: CATCAAATACATGGGCAGCCACATCCCTGAGAGCCC...AATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGGAATGAGGTTAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp AGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCCACGTAGAACTGGAGTaGGCTCTCAGGGATGTGGCT +
Preference number: 4 (lower is better)
Translates to: SHLLCQMTTKLGVPFFSAHVELE*ALRDVA
Trigger: AGCCACATCCCTGAGAGCCCACTCCAGTTCTACGTG...GGCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTCCATACACGAGGCCTaGACCGTATGCAGAAACACT +
Preference number: 4 (lower is better)
Translates to: AQVCRKAGKIPYTSFLDFSIHEA*TVCRNT
Trigger: AGTGTTTCTGCATACGGTCCAGGCCTCGTGTATGGA...GAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCCTCTGAGATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCAGGTGGCAGTTTTGTTaGCCACTCCATACACGAGGC +
Preference number: 4 (lower is better)
Translates to: PSEITLNILVRLPRLMKGRWQFC*PLHTRG
Trigger: GCCTCGTGTATGGAGTGGCCAACAAAACTGCCACCT...GCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGATCTCAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGATCTTCAAGGAGATGCCAATGTaGTTGTTGGGCAGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: AGLFHQEFWFAPSVLRIFKEMPM*LLGSLF
Trigger: GAAGAGGCTGCCCAACAACCACATTGGCATCTCCTT...GAAGATCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCAATAAAGAATTCCGACTaGATACCTGTGGTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: PDHTTHLGSGNVPDTLTSIKNSD*IPVVPP
Trigger: AGGGGGCACCACAGGTATCCAGTCGGAATTCTTTAT...TGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAACATTTTAACCTTGGATaGGCCTTCGATGGTGACGGA +
Preference number: 4 (lower is better)
Translates to: PDTTPATRVATSSGLSSKHFNLG*AFDGDG
Trigger: TCCGTCACCATCGAAGGCCCATCCAAGGTTAAAATG...TTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCCACTGACTCCACCAGGATaGATGAGGTCTCGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: SSPLPNDNQTRCPLFLCPLTPPG*MRSRWL
Trigger: CAGCCAACGAGACCTCATCCATCCTGGTGGAGTCAG...TGGGCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACACAGCTGTCTCATTGTGTTCCTaGTCTGTCTGCTGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: EGRQNSLHLISGFLHHTAVSLCS*SVCCSG
Trigger: GCCACTGCAGCAGACAGACCAGGAACACAATGAGAC...AGCTGTGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCCAGGGATCTTTGGCAAGTaGGAAACTGCTCGCCACTGC +
Preference number: 4 (lower is better)
Translates to: SSPLPNDNQTRCPLFLCPGIFGK*ETARHC
Trigger: GCAGTGGCGAGCAGTTTCCCACTTGCCAAAGATCCC...TGGGCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp ACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCATTCCAAAGCGAGGGCGTTAATCCATaGGCCCCTCTGAGATCACTT +
Preference number: 4 (lower is better)
Translates to: TTHLGSGNVPDTLTSFQSEGVNP*APLRSL
Trigger: AAGTGATCTCAGAGGGGCCCATGGATTAACGCCCTC...GCTTTGGAATGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TCCCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACATGGAGTGTTATGTCATaGGACGGACCTTGGGATGAG +
Preference number: 4 (lower is better)
Translates to: SQLSGQRPAGVSFCPVCTWSVMS*DGPWDE
Trigger: CTCATCCCAAGGTCCGTCCCATGACATAACACTCCA...TGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGACGTTTGATTCCAGTTTaGCTTCCGTGTCCCAGCTTA +
Preference number: 4 (lower is better)
Translates to: QWLVCSTKSSGLHLVYSGRLIPV*LPCPSL
Trigger: TAAGCTGGGACACGGAAGCCAAACTGGAATCAAACG...TCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACAGCTTCAGGGCCAACTTaGACTTCAAAGGGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: CRKAGKIPYTSFLDFCTTASGPT*TSKGLF
Trigger: AAAGAGCCCCTTTGAAGTTCAAGTTGGCCCTGAAGC...TGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CACTTTAACCTCATTCCAAAGCCAGCTCAGGTCTGCAGGAAGGCAGGCAAAATTTACTCAATCTTTGCCTaGGAGGGGCCTTCAATGGCA +
Preference number: 4 (lower is better)
Translates to: HFNLIPKPAQVCRKAGKIYSIFA*EGPSMA
Trigger: TGCCATTGAAGGCCCCTCTCAGGCAAAGATTGAGTA...AATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGGAATGAGGTTAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAAACCTACCTTGGGCCAGTATTTaGCATCACACGATCCATCAT +
Preference number: 4 (lower is better)
Translates to: YYTCHKSGHFLRTKQQNLPWASI*HHTIHH
Trigger: ATGATGGATCGTGTGATGTCAAATACTGGCCCAAGG...TAGGTTTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACATCGTCACACATGATGTaGACAGCATATTCGCCAGGC +
Preference number: 4 (lower is better)
Translates to: CRKAGKIPYTSFLDFCTTSSHMM*TAYSPG
Trigger: GCCTGGCGAATATGCTGTTCACATCATGTGTGACGA...TGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TACCCCCAACACTCGCCCCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTGTATCATTGGCATTGTaGATAATGTCAAAATCCACG +
Preference number: 4 (lower is better)
Translates to: YPQHSPQILHLPQEWPLPVSLAL*IMSKST
Trigger: CGTGGATTTTGACATTATTCACAATGCCAATGATAC...AGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGGGCGAGTGTTGGGGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp ATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTGGAGCGTGCTTCAAAGAGGATGTTaGCGAAGTACTCCCCGGGTT +
Preference number: 4 (lower is better)
Translates to: ITLNILVRLPRLMKGWSVLQRGC*RSTPRV
Trigger: AACCCGGGGAGTACTTCGTCAACATCCTCTTTGAAG...CACGCTCCAGCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CCAGAAAAAGTGACCCATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATTGTTGTTCTGAATACTaGCTTCGGCTTTTGTTCCCG +
Preference number: 4 (lower is better)
Translates to: PEKVTHEVGWGGCGVLCHCCSEY*LRLLFP
Trigger: CGGGAACAAAAGCCGAAGTCAGTATTCAGAACAACA...ATGACATAACACTCCACACCCGCCCCAGCCAACTTCATGGGTCACTTTTTCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTATCAGCATATTTAACTaGGACCATGTAAGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: WSFHIRLRAVPLSVGWAFISIFN*DHVRSL
Trigger: GAGGGACCTTACATGGTCTCAGTTAAATATGCTGAT...AAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACACAGCTTCTTGGTCCGTTATTTaGACAGCAAGCAGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: EGRQNSLHLISGFLHHTASWSVI*TASRPS
Trigger: GGAAGGCCTGCTTGCTGTTCAAATAACGGACCAAGA...AGCTGTGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp AGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCCTTGTGTCCACGATaGAGTCAGACATCTCGAAAG +
Preference number: 4 (lower is better)
Translates to: RSAGRQAKFPTPHFWISAPLCPR*SQTSRK
Trigger: CTTTCGAGATGTCTGACTTCATCGTGGACACAAGGG...TGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TACCCCCAACACTCGCCCCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTTCTAGGACTTATTTCTaGAGGCATTTTACAACAGCA +
Preference number: 4 (lower is better)
Translates to: YPQHSPQILHLPQEWPLPSRTYF*RHFTTA
Trigger: TGCTGTTGTAAAATGCCTTCAGAAATAAGTCCTAGA...AGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGGGCGAGTGTTGGGGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GGAAACTGCTCGCCACTGCAGAATTTCTTCAGACCAAGGAAGGGACTGAAACGGATCTTCTCAGCCCCCTaGACAAGCTTGCATTTCTTA +
Preference number: 4 (lower is better)
Translates to: GNCSPLQNFFRPRKGLKRIFSAP*TSLHFL
Trigger: TAAGAAATGCAAGCTTGTTCAGGGGGCTGAGAAGAT...CCGTTTCAGTCCCTTCCTTGGTCTGAAGAAATTCTGCAGTGGCGAGCAGTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGTGCCACTCTGCCCTCTaGGTTTCTGTAGGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: PQEFHSVLSVQIIIFQKKCHSAL*VSVGCP
Trigger: CGGGCACCCTACAGAAACTCAGAGGGCAGAGTGGCA...CTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACACAGCTCTCAGGCAACGTCCCTaGCACTTTAACCTCATTCCA +
Preference number: 4 (lower is better)
Translates to: EGRQNSLHLISGFLHHTALRQRP*HFNLIP
Trigger: TGGAATGAGGTTAAAGTGTCAGGGACGTTGCCTGAG...AGCTGTGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp AGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCGTCAGGGGTCACTTGTaGCTCCTCTTTGTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: SHLLCQMTTKLGVPFFSAVRGHL*LLFVPF
Trigger: GAAGGGAACAAAGAGGAGGCACAAGTGACCCCTGAC...GGCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAAACCTATCCAGAAAGTCTTTCTaGTTCACCAGCTCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: YYTCHKSGHFLRTKQQNLSRKSF*FTSSSR
Trigger: TCTGGAGGAGCTGGTGAAGCAGAAAGACTTTCTGGA...TAGGTTTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTGGAGCGTGTGTCCAGAAAGTCTTTCTaGTTCACCAGCTCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: HFKHFGKTAQADEGLERVSRKSF*FTSSSR
Trigger: TCTGGAGGAGCTGGTGAAGCAGAAAGACTTTCTGGA...CACACGCTCCAGCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGAGTTGTACTCAATCTTTaGCTGAGAGGGGCCTTCAAT +
Preference number: 4 (lower is better)
Translates to: QWLVCSTKSSGLHLVYSGVVLNL*LRGAFN
Trigger: ATTGAAGGCCCCTCTCAGGCAAAGATTGAGTACAAC...TCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp AGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCCAAACCTGGCCCGTATaGTCGAACCAGATCAGGGTT +
Preference number: 4 (lower is better)
Translates to: SHLLCQMTTKLGVPFFSAQTWPV*SNQIRV
Trigger: AACCCTGATCTGGTTCGAGCATACGGGCCAGGTTTG...GGCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CTTCTCAGCCCCCTGAACAAGCTTGCATTTCTTAAGATTCTCCAATATGTCCCTACCACAGCAATGGTGTaGTTGATGGCCTTCACCGGG +
Preference number: 4 (lower is better)
Translates to: LLSPLNKLAFLKILQYVPTTAMV*LMAFTG
Trigger: CCCGGTGAAGGCCATCAAGCACACCATTGCTGTGGT...AGGGACATATTGGAGAATCTTAAGAAATGCAAGCTTGTTCAGGGGGCTGAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCAATCCAAATCCTTCACTaGATCGCCAGGAAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: SAGRQAKFPTPHFWISAPIQILH*IARKRA
Trigger: AGCCCTCTTCCTGGCGATGCAGTGAAGGATTTGGAT...TGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp GCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCAGGTCACCGCGTAGGTaGCATCTTTGTTGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: AQVCRKAGKIPYTSFLDFRSPRR*HLCCSE
Trigger: TTCAGAACAACAAAGATGGCACCTACGCGGTGACCT...GAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGCCAGGTCCTTGGGCTTaGACCCTAGATGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: PQEFHSVLSVQIIIFQKKPGPWA*TLDGWQ
Trigger: CTGCCAGCCATCTAGGGTGCAAGCCCAAGGACCTGG...CTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAAACCTAGAATGTACTCAGCACTaGAGCTGCCATCCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: YYTCHKSGHFLRTKQQNLECTQH*SCHPCC
Trigger: ACAACAAGGATGGCAGCTGCAGTGCTGAGTACATTC...TAGGTTTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TCCCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAAGGTTACTGTGTGTGTaGCATCTCCATTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: SQLSGQRPAGVSFCPVCTRLLCV*HLHCPP
Trigger: TGGTGGACAATGGAGATGGCACACACACAGTAACCT...TGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCATCTGTGTGGCTCGGATaGGATAAGGAGAAAGTGGGA +
Preference number: 4 (lower is better)
Translates to: SAGRQAKFPTPHFWISAPSVWLG*DKEKVG
Trigger: TCCCACTTTCTCCTTATCGCATCCGAGCCACACAGA...TGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp GAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACACAGCTTCTGTGTGGCTCGGATaGGATAAGGAGAAAGTGGGA +
Preference number: 4 (lower is better)
Translates to: EGRQNSLHLISGFLHHTASVWLG*DKEKVG
Trigger: TCCCACTTTCTCCTTATCGCATCCGAGCCACACAGA...AGCTGTGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CACTTTAACCTCATTCCAAAGCCAGCTCAGGTCTGCAGGAAGGCAGGCAAAATTGAGGCCTGGACCGTATaGAGAAACACTTCCACTGTT +
Preference number: 4 (lower is better)
Translates to: HFNLIPKPAQVCRKAGKIEAWTV*RNTSTV
Trigger: AACAGTGGAAGTGTTTCTGCATACGGTCCAGGCCTC...AATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGGAATGAGGTTAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp GCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTATGCCACCATAACCTaGATCCCTTGTGTCCACGAT +
Preference number: 4 (lower is better)
Translates to: AQVCRKAGKIPYTSFLDFYATIT*IPCVHD
Trigger: ATCGTGGACACAAGGGATGCAGGTTATGGTGGCATA...GAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTTTACAACAGGGGCTCCCAGGCACGTaGTCGTCAGCGAATTTGGTG +
Preference number: 4 (lower is better)
Translates to: YVPQESSLGLISEGILQQGLPGT*SSANLV
Trigger: CACCAAATTCGCTGACGAGCACGTGCCTGGGAGCCC...CTGTTGTAAAATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CTTCTCAGCCCCCTGAACAAGCTTGCATTTCTTAAGATTCTCCAATATGTCCCTTCCTGGTCTGTCTGCTaGAGTGGCTGGTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: LLSPLNKLAFLKILQYVPSWSVC*SGWSVP
Trigger: TGGAACAGACCAGCCACTGCAGCAGACAGACCAGGA...AGGGACATATTGGAGAATCTTAAGAAATGCAAGCTTGTTCAGGGGGCTGAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCCATGTTCCTGGTCTGTCTaGTGCAGTGGCTGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: SSPLPNDNQTRCPLFLCPCSWSV*CSGWSV
Trigger: AACAGACCAGCCACTGCAGCAGACAGACCAGGAACA...TGGGCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGAGAAACTGCTCGCCACTaGAGAATTTCTTCAGACCAA +
Preference number: 4 (lower is better)
Translates to: QWLVCSTKSSGLHLVYSGETARH*RISSDQ
Trigger: TTGGTCTGAAGAAATTCTGCAGTGGCGAGCAGTTTC...TCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp ATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTGGAGCGTGAAGCCAGCTCAGGTCTaGAGGAAGGCAGGCAAAATT +
Preference number: 4 (lower is better)
Translates to: ITLNILVRLPRLMKGWSVKPAQV*RKAGKI
Trigger: AATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTT...CACGCTCCAGCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACACCACTTCAGAGCCAATaGATTCTACCACGAAGTCCG +
Preference number: 4 (lower is better)
Translates to: CRKAGKIPYTSFLDFCTTPLQSQ*ILPRSP
Trigger: CGGACTTCGTGGTAGAATCCATTGGCTCTGAAGTGG...TGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp ACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCATTCCAAAGCAGATTTCTCCAAACCTaGCCCGTATGCTCGAACCAG +
Preference number: 4 (lower is better)
Translates to: TTHLGSGNVPDTLTSFQSRFLQT*PVCSNQ
Trigger: CTGGTTCGAGCATACGGGCCAGGTTTGGAGAAATCT...GCTTTGGAATGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCCACGCCACCATACTTCATaGTCAACGTGTACATGCCGG +
Preference number: 4 (lower is better)
Translates to: SSPLPNDNQTRCPLFLCPRHHTS*STCTCR
Trigger: CCGGCATGTACACGTTGACCATGAAGTATGGTGGCG...TGGGCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GTGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTTTCCCTTCTATTCCTaGTCCAAAGACTTTGATCCT +
Preference number: 4 (lower is better)
Translates to: VVLSHQAPGCSTFCRVGFFPFYS*SKDFDP
Trigger: AGGATCAAAGTCTTTGGACCAGGAATAGAAGGGAAA...AAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCAC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAGGCTTGCACCCTAGATaGCTGGCAGCCTTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: DPQEFHSVLSVQIIIFQKGLHPR*LAAFSD
Trigger: GTCACTGAAGGCTGCCAGCCATCTAGGGTGCAAGCC...TTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGATCTTCTGGCAGTCACTTTGCTaGCATCATATGTGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: AGLFHQEFWFAPSVLRIFWQSLC*HHMWEG
Trigger: TCCTTCCCACATATGATGCCAGCAAAGTGACTGCCA...GAAGATCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CTGAGAAGTGTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTTATTGTCATGGACAATaGCTCTTTTGGGTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: LRSVRRPQSMGVLAMRSGYCHGQ*LFWVFL
Trigger: AAGGAAAACCCAAAAGAGCCATTGTCCATGACAATA...ACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTACACTTCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGACGTCAGCGAATTTGGTaGAGACGATATAAACCCCAG +
Preference number: 4 (lower is better)
Translates to: PTFRPKTRRSFILSCLYRRQRIW*RRYKPQ
Trigger: CTGGGGTTTATATCGTCTCCACCAAATTCGCTGACG...TCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGGAGGGGCTGGTGACGTaGGCCGACATATCACTGCTG +
Preference number: 4 (lower is better)
Translates to: PQEFHSVLSVQIIIFQKKEGLVT*ADISLL
Trigger: CAGCAGTGATATGTCGGCCCACGTCACCAGCCCCTC...CTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTGCAAAGGATGCTGGCTaGTTAACTTTTAATCCCGAT +
Preference number: 4 (lower is better)
Translates to: WSFHIRLRAVPLSVGWAFAKDAG*LTFNPD
Trigger: ATCGGGATTAAAAGTTAACCAGCCAGCATCCTTTGC...AAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TCCCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAAACAGCATACTTATCTaGCTCCAGCTCAGACACGTG +
Preference number: 4 (lower is better)
Translates to: SQLSGQRPAGVSFCPVCTNSILI*LQLRHV
Trigger: CACGTGTCTGAGCTGGAGCCAGATAAGTATGCTGTT...TGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCAACAGCATACTTATCTaGCTCCAGCTCAGACACGTG +
Preference number: 4 (lower is better)
Translates to: AQVCRKAGKIPYTSFLDFNSILI*LQLRHV
Trigger: CACGTGTCTGAGCTGGAGCCAGATAAGTATGCTGTT...GAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCCACGATCAGCAGCATGTTaGAGCCAGCTTTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: SSPLPNDNQTRCPLFLCPRSAAC*SQLCCS
Trigger: ACTGCAGCAAAGCTGGCTCCAACATGCTGCTGATCG...TGGGCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCGCCCCACAAACAGGCTaGAGGGCTTTGTATAAAATG +
Preference number: 4 (lower is better)
Translates to: AQVCRKAGKIPYTSFLDFAPQTG*RALYKM
Trigger: CATTTTATACAAAGCCCTCCAGCCTGTTTGTGGGGC...GAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACACAGCTTGGAGTGTTATGTCATaGGACGGACCTTGGGATGAG +
Preference number: 4 (lower is better)
Translates to: EGRQNSLHLISGFLHHTAWSVMS*DGPWDE
Trigger: CTCATCCCAAGGTCCGTCCCATGACATAACACTCCA...AGCTGTGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACACAGCTAGCTTACAACACCCGTaGTCCTTTCACATCAGGCTC +
Preference number: 4 (lower is better)
Translates to: EGRQNSLHLISGFLHHTASLQHP*SFHIRL
Trigger: GAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCT...AGCTGTGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCAAGCTTACAACACCCGTaGTCCTTTCACATCAGGCTC +
Preference number: 4 (lower is better)
Translates to: SAGRQAKFPTPHFWISAPSLQHP*SFHIRL
Trigger: GAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCT...TGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTTTACAACAGAAGATCTTGACCACGTaGGGGCCAGGCTGCATGGGT +
Preference number: 4 (lower is better)
Translates to: YVPQESSLGLISEGILQQKILTT*GPGCMG
Trigger: ACCCATGCAGCCTGGCCCTCACGTGGTCAAGATCTT...CTGTTGTAAAATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCCATACTCAATCTTTGCCTaGGAGGGGCCTTCAATGGCA +
Preference number: 4 (lower is better)
Translates to: SSPLPNDNQTRCPLFLCPYSIFA*EGPSMA
Trigger: TGCCATTGAAGGCCCCTCTCAGGCAAAGATTGAGTA...TGGGCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp ATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTGGAGCGTGCCTTGGGCCAGTATTTaGCATCACACGATCCATCAT +
Preference number: 4 (lower is better)
Translates to: ITLNILVRLPRLMKGWSVPWASI*HHTIHH
Trigger: ATGATGGATCGTGTGATGTCAAATACTGGCCCAAGG...CACGCTCCAGCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TGTTCCTGGTCTGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTACATATCACTGCTGTTaGTTTCTGGGATTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: CSWSVCCSGWSVPPRVLVTYHCC*FLGFSG
Trigger: ACCTGAAAATCCCAGAAATCAACAGCAGTGATATGT...AACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACAGACCAGGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTGGAGCGTGTGTTTAATCCCGATTCCTaGAGGCTCATAACAGTGAGG +
Preference number: 4 (lower is better)
Translates to: HFKHFGKTAQADEGLERVFNPDS*RLITVR
Trigger: CCTCACTGTTATGAGCCTTCAGGAATCGGGATTAAA...CACACGCTCCAGCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTTTAATCCCGATTCCTaGAGGCTCATAACAGTGAGG +
Preference number: 4 (lower is better)
Translates to: AQVCRKAGKIPYTSFLDFFNPDS*RLITVR
Trigger: CCTCACTGTTATGAGCCTTCAGGAATCGGGATTAAA...GAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAATTGTTTCATAAATGCTaGAGAGTGAACCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PDTTPATRVATSSGLSSKLFHKC*RVNQQL
Trigger: GAGCTGCTGGTTCACTCTTCAGCATTTATGAAACAA...TTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CACTTTAACCTCATTCCAAAGCCAGCTCAGGTCTGCAGGAAGGCAGGCAAAATTAGGGCTTTGCCGTCTTaGCAGTTCTGGTTAAAGTTG +
Preference number: 4 (lower is better)
Translates to: HFNLIPKPAQVCRKAGKIRALPS*QFWLKL
Trigger: CAACTTTAACCAGAACTGGCAAGACGGCAAAGCCCT...AATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGGAATGAGGTTAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTCAACCCTGGACCTTTTaGAGTGACTTTACTGGCATC +
Preference number: 4 (lower is better)
Translates to: LRSAGRQAKFPTPHFWISQPWTF*SDFTGI
Trigger: GATGCCAGTAAAGTCACTGCAAAAGGTCCAGGGTTG...AGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CTTCTCAGCCCCCTGAACAAGCTTGCATTTCTTAAGATTCTCCAATATGTCCCTCAGGCTTCCCCAACCTaGACAACGAAGGGACTCTTA +
Preference number: 4 (lower is better)
Translates to: LLSPLNKLAFLKILQYVPQASPT*TTKGLL
Trigger: TAAGAGTCCCTTCGTTGTGCAGGTTGGGGAAGCCTG...AGGGACATATTGGAGAATCTTAAGAAATGCAAGCTTGTTCAGGGGGCTGAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp AAGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCGAGCTCCCCACTTCCTaGAGCTTTGGTGTCAACCTT +
Preference number: 4 (lower is better)
Translates to: KSSPLPNDNQTRCPLFLCELPTS*SFGVNL
Trigger: AAGGTTGACACCAAAGCTGCAGGAAGTGGGGAGCTC...GCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGGGGTAATACTCGAATaGGTAGACCCCATCCAGAAA +
Preference number: 4 (lower is better)
Translates to: LRSAGRQAKFPTPHFWISGVILE*VDPIQK
Trigger: TTTCTGGATGGGGTCTACGCATTCGAGTATTACCCC...AGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTGGAGCGTGTGGTTGTACTCAATCTTTaGCTGAGAGGGGCCTTCAAT +
Preference number: 4 (lower is better)
Translates to: HFKHFGKTAQADEGLERVVVLNL*LRGAFN
Trigger: ATTGAAGGCCCCTCTCAGGCAAAGATTGAGTACAAC...CACACGCTCCAGCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp GGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACGTTGTACTCAATCTTTaGCTGAGAGGGGCCTTCAAT +
Preference number: 4 (lower is better)
Translates to: GLQEGRQNSLHLISGFLHVVLNL*LRGAFN
Trigger: ATTGAAGGCCCCTCTCAGGCAAAGATTGAGTACAAC...GTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTGGAGCGTGTGGTGTGTAGGTTCATTTaGCTTCAGACCACTTCTCTC +
Preference number: 4 (lower is better)
Translates to: HFKHFGKTAQADEGLERVVCRFI*LQTTSL
Trigger: GAGAGAAGTGGTCTGAAGGCAAATGAACCTACACAC...CACACGCTCCAGCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TGTTCCTGGTCTGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTGGGGATTTCCTGAGATaGAAAGAGAACTTTGATAGT +
Preference number: 4 (lower is better)
Translates to: CSWSVCCSGWSVPPRVLVGDFLR*KENFDS
Trigger: ACTATCAAAGTTCTCTTTGCATCTCAGGAAATCCCC...AACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACAGACCAGGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp ATTCTCCAATATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTCCCATTTTCCACACCTaGTTTGCTGAGCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: ILQYVPQESSLGLISEGIPIFHT*FAEPWA
Trigger: GGCCCAGGGCTCAGCAAAGCAGGTGTGGAAAATGGG...AATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATATTGGAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACAAGGTCACCGCGTAGGTaGCATCTTTGTTGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: CRKAGKIPYTSFLDFCTTRSPRR*HLCCSE
Trigger: TTCAGAACAACAAAGATGGCACCTACGCGGTGACCT...TGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp ATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTGGAGCGTGGAATGTACTCAGCACTaGAGCTGCCATCCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: ITLNILVRLPRLMKGWSVECTQH*SCHPCC
Trigger: ACAACAAGGATGGCAGCTGCAGTGCTGAGTACATTC...CACGCTCCAGCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp AGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGTGACTCCACCGTGAAGGACTaGAGGACACGGGCTCGGACG +
Preference number: 4 (lower is better)
Translates to: RSFILSCLYRSLFSRKSDSTVKD*RTRART
Trigger: CGTCCGAGCCCGTGTCCTGCAGTCCTTCACGGTGGA...GTCACTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCCACCCATGTATTTGATGTaGATCTCATGGAGCCCGACC +
Preference number: 4 (lower is better)
Translates to: SSPLPNDNQTRCPLFLCPPMYLM*ISWSPT
Trigger: GGTCGGGCTCCATGAGATGCACATCAAATACATGGG...TGGGCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp AGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCCCCATGTATTTGATGTaGATCTCATGGAGCCCGACC +
Preference number: 4 (lower is better)
Translates to: SHLLCQMTTKLGVPFFSAPMYLM*ISWSPT
Trigger: GGTCGGGCTCCATGAGATGCACATCAAATACATGGG...GGCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp GAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACACAGCTTATGCCACCATAACCTaGATCCCTTGTGTCCACGAT +
Preference number: 4 (lower is better)
Translates to: EGRQNSLHLISGFLHHTAYATIT*IPCVHD
Trigger: ATCGTGGACACAAGGGATGCAGGTTATGGTGGCATA...AGCTGTGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGATCAATCTTGCCTTTTaGGCCATTCAACCTTATAGC +
Preference number: 4 (lower is better)
Translates to: CLLQWLVCSTKSSGLHLVINLAF*AIQPYS
Trigger: GCTATAAGGTTGAATGGCGCAAAAGGCAAGATTGAT...CACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp ATTCTCCAATATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTGCTGGCGTCCGAGGATaGCTTGGGAATGGCGCTATA +
Preference number: 4 (lower is better)
Translates to: ILQYVPQESSLGLISEGIAGVRG*LGNGAI
Trigger: TATAGCGCCATTCCCAAGGCATCCTCGGACGCCAGC...AATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATATTGGAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CTTCTCAGCCCCCTGAACAAGCTTGCATTTCTTAAGATTCTCCAATATGTCCCTAAGCAAAACCATGACTaGCGGGATGGTCTCGTGTGG +
Preference number: 4 (lower is better)
Translates to: LLSPLNKLAFLKILQYVPKQNHD*RDGLVW
Trigger: CCACACGAGACCATCCCGGCAGTCATGGTTTTGCTT...AGGGACATATTGGAGAATCTTAAGAAATGCAAGCTTGTTCAGGGGGCTGAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCCAAAGCCAGCTCAGGTCTaGAGGAAGGCAGGCAAAATT +
Preference number: 4 (lower is better)
Translates to: SSPLPNDNQTRCPLFLCPKPAQV*RKAGKI
Trigger: AATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTT...TGGGCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CTTCTCAGCCCCCTGAACAAGCTTGCATTTCTTAAGATTCTCCAATATGTCCCTCCCAGATACTACACCTaGCACAAGAGTGGCCACTTC +
Preference number: 4 (lower is better)
Translates to: LLSPLNKLAFLKILQYVPPRYYT*HKSGHF
Trigger: GAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGG...AGGGACATATTGGAGAATCTTAAGAAATGCAAGCTTGTTCAGGGGGCTGAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCCTCTGAGATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCCTTCAAATGGGCTCTTaGAGATGTGCTGTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: PSEITLNILVRLPRLMKGLQMGS*RCAVLQ
Trigger: TTGCAGGACAGCACATCTCCAAGAGCCCATTTGAAG...GCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGATCTCAGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTGGAGCGTGTGACACATCGATACACCTaGTTTCCTTTGTCTTCCACG +
Preference number: 4 (lower is better)
Translates to: HFKHFGKTAQADEGLERVTHRYT*FPLSST
Trigger: CGTGGAAGACAAAGGAAACCAGGTGTATCGATGTGT...CACACGCTCCAGCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp ATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTGGAGCGTGATCCGGTTCTTCATCTaGATGTCAATGCGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: ITLNILVRLPRLMKGWSVIRFFI*MSMRWP
Trigger: AGGCCAACGCATTGACATCCAGATGAAGAACCGGAT...CACGCTCCAGCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTTTCCCTTCTATTCCTaGTCCAAAGACTTTGATCCT +
Preference number: 4 (lower is better)
Translates to: CLLQWLVCSTKSSGLHLVFPFYS*SKDFDP
Trigger: AGGATCAAAGTCTTTGGACCAGGAATAGAAGGGAAA...CACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGTCACCTCCACTACATaGAGACCTTTCTCAAAGGGT +
Preference number: 4 (lower is better)
Translates to: LRSAGRQAKFPTPHFWISVTSTT*RPFSKG
Trigger: ACCCTTTGAGAAAGGTCTCCATGTAGTGGAGGTGAC...AGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAAAAACACTTCCACTGTTaGGGTAGTTCACGTAGAACT +
Preference number: 4 (lower is better)
Translates to: PDTTPATRVATSSGLSSKKHFHC*GSSRRT
Trigger: AGTTCTACGTGAACTACCCCAACAGTGGAAGTGTTT...TTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp AGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCTCCATACACGAGGCCTaGACCGTATGCAGAAACACT +
Preference number: 4 (lower is better)
Translates to: SHLLCQMTTKLGVPFFSASIHEA*TVCRNT
Trigger: AGTGTTTCTGCATACGGTCCAGGCCTCGTGTATGGA...GGCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTAACAGCATACTTATCTaGCTCCAGCTCAGACACGTG +
Preference number: 4 (lower is better)
Translates to: LRSAGRQAKFPTPHFWISNSILI*LQLRHV
Trigger: CACGTGTCTGAGCTGGAGCCAGATAAGTATGCTGTT...AGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACACAGCTGCCCCACAAACAGGCTaGAGGGCTTTGTATAAAATG +
Preference number: 4 (lower is better)
Translates to: EGRQNSLHLISGFLHHTAAPQTG*RALYKM
Trigger: CATTTTATACAAAGCCCTCCAGCCTGTTTGTGGGGC...AGCTGTGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGTGGCTGGGGCGGGTGTaGAGTGTTATGTCATGGGAC +
Preference number: 4 (lower is better)
Translates to: PQEFHSVLSVQIIIFQKKWLGRV*SVMSWD
Trigger: GTCCCATGACATAACACTCCACACCCGCCCCAGCCA...CTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTCCTACACCTCATTTCTaGATTTCTGCACCACACAGC +
Preference number: 4 (lower is better)
Translates to: LRSAGRQAKFPTPHFWISPTPHF*ISAPHS
Trigger: GCTGTGTGGTGCAGAAATCCAGAAATGAGGTGTAGG...AGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CTTCTCAGCCCCCTGAACAAGCTTGCATTTCTTAAGATTCTCCAATATGTCCCTCTTTGGTGTCAACCTTaGAATCTGTGGTCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: LLSPLNKLAFLKILQYVPLWCQP*NLWSPG
Trigger: TCCGGGAGACCACAGATTTCAAGGTTGACACCAAAG...AGGGACATATTGGAGAATCTTAAGAAATGCAAGCTTGTTCAGGGGGCTGAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CTTCTCAGCCCCCTGAACAAGCTTGCATTTCTTAAGATTCTCCAATATGTCCCTGCTTCAGGGCCAACTTaGACTTCAAAGGGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: LLSPLNKLAFLKILQYVPASGPT*TSKGLF
Trigger: AAAGAGCCCCTTTGAAGTTCAAGTTGGCCCTGAAGC...AGGGACATATTGGAGAATCTTAAGAAATGCAAGCTTGTTCAGGGGGCTGAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp ATTCTCCAATATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTCTTCACCGGGGTGTATaGGCATGCATATGTGCCGTC +
Preference number: 4 (lower is better)
Translates to: ILQYVPQESSLGLISEGILHRGV*ACICAV
Trigger: GACGGCACATATGCATGCTCATACACCCCGGTGAAG...AATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATATTGGAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAACTGGCCCAAACACTTTaGCCTTCTGAGGATGGCTAC +
Preference number: 4 (lower is better)
Translates to: DPQEFHSVLSVQIIIFQKLAQTL*PSEDGY
Trigger: GTAGCCATCCTCAGAAGGTCAAAGTGTTTGGGCCAG...TTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAACCCTGGTATCAACGGTaGACTCCTGATCCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: DPQEFHSVLSVQIIIFQKPWYQR*TPDPSQ
Trigger: TTGGGAAGGATCAGGAGTTCACCGTTGATACCAGGG...TTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp ATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTGGAGCGTGTTTCAATGTCAGCTTTaGAGGGAGACCCAGGTATGT +
Preference number: 4 (lower is better)
Translates to: ITLNILVRLPRLMKGWSVFQCQL*RETQVC
Trigger: ACATACCTGGGTCTCCCTTCAAAGCTGACATTGAAA...CACGCTCCAGCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp ATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTGGAGCGTGTGTTGTTCTGAATACTaGCTTCGGCTTTTGTTCCCG +
Preference number: 4 (lower is better)
Translates to: ITLNILVRLPRLMKGWSVCCSEY*LRLLFP
Trigger: CGGGAACAAAAGCCGAAGTCAGTATTCAGAACAACA...CACGCTCCAGCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GGAAACTGCTCGCCACTGCAGAATTTCTTCAGACCAAGGAAGGGACTGAAACGGATTTATCTTCGACTCTaGTGGTCCCTCAACAGTTAT +
Preference number: 4 (lower is better)
Translates to: GNCSPLQNFFRPRKGLKRIYLRL*WSLNSY
Trigger: ATAACTGTTGAGGGACCATCAGAGTCGAAGATAAAT...CCGTTTCAGTCCCTTCCTTGGTCTGAAGAAATTCTGCAGTGGCGAGCAGTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAAATTTATCTTCGACTCTaGTGGTCCCTCAACAGTTAT +
Preference number: 4 (lower is better)
Translates to: PDTTPATRVATSSGLSSKIYLRL*WSLNSY
Trigger: ATAACTGTTGAGGGACCATCAGAGTCGAAGATAAAT...TTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp AGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCATTTAATCCCGATTCCTaGAGGCTCATAACAGTGAGG +
Preference number: 4 (lower is better)
Translates to: RSAGRQAKFPTPHFWISAFNPDS*RLITVR
Trigger: CCTCACTGTTATGAGCCTTCAGGAATCGGGATTAAA...TGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGATGGGCCTTCGATGGTaGCGGATAATGTCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: PQEFHSVLSVQIIIFQKKMGLRW*RIMSLD
Trigger: GTCCAGGGACATTATCCGTCACCATCGAAGGCCCAT...CTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTGGAGCGTGTGTTGTTTCATAAATGCTaGAGAGTGAACCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: HFKHFGKTAQADEGLERVLFHKC*RVNQQL
Trigger: GAGCTGCTGGTTCACTCTTCAGCATTTATGAAACAA...CACACGCTCCAGCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CTTCTCAGCCCCCTGAACAAGCTTGCATTTCTTAAGATTCTCCAATATGTCCCTACTAAAGCAAAACCATaGCTGCCGGGATGGTCTCGT +
Preference number: 4 (lower is better)
Translates to: LLSPLNKLAFLKILQYVPTKAKP*LPGWSR
Trigger: ACGAGACCATCCCGGCAGTCATGGTTTTGCTTTAGT...AGGGACATATTGGAGAATCTTAAGAAATGCAAGCTTGTTCAGGGGGCTGAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp AGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGTGACACCATCACGTCTCCTTaGCCGGCGCTGATGGTGTCC +
Preference number: 4 (lower is better)
Translates to: RSFILSCLYRSLFSRKSDTITSP*PALMVS
Trigger: GGACACCATCAGCGCCGGGCAAGGAGACGTGATGGT...GTCACTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTTTACAACAGACCACAGCAATGGTGTaGTTGATGGCCTTCACCGGG +
Preference number: 4 (lower is better)
Translates to: YVPQESSLGLISEGILQQTTAMV*LMAFTG
Trigger: CCCGGTGAAGGCCATCAAGCACACCATTGCTGTGGT...CTGTTGTAAAATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CACTTTAACCTCATTCCAAAGCCAGCTCAGGTCTGCAGGAAGGCAGGCAAAATTGTGTGTAGGTTCATTTaGCTTCAGACCACTTCTCTC +
Preference number: 4 (lower is better)
Translates to: HFNLIPKPAQVCRKAGKIVCRFI*LQTTSL
Trigger: GAGAGAAGTGGTCTGAAGGCAAATGAACCTACACAC...AATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGGAATGAGGTTAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTTTACAACAGAGAGGGCTGTTGAACTaGACGTTGAGCGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: YVPQESSLGLISEGILQQRGLLN*TLSGAF
Trigger: GAAAGCCCCGCTCAACGTGCAGTTCAACAGCCCTCT...CTGTTGTAAAATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp AGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCGAATGTACTCAGCACTaGAGCTGCCATCCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: SHLLCQMTTKLGVPFFSAECTQH*SCHPCC
Trigger: ACAACAAGGATGGCAGCTGCAGTGCTGAGTACATTC...GGCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCCAAGGTTACTGTGTGTGTaGCATCTCCATTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: SSPLPNDNQTRCPLFLCPRLLCV*HLHCPP
Trigger: TGGTGGACAATGGAGATGGCACACACACAGTAACCT...TGGGCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGGAATCCAGGGGGACATaGATTTACCGGTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: PQEFHSVLSVQIIIFQKKESRGT*IYRCLL
Trigger: GAGGAGGCACCGGTAAATGCATGTCCCCCTGGATTC...CTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000295956.9
CDS-3UTR GCA 90 bp TCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCAGCAGGTAGGTCACTGTaGATGTCCCATCTTTATTGT +
Preference number: 4 (lower is better)
Translates to: SAGRQAKFPTPHFWISAPAGRSL*MSHLYC
Trigger: ACAATAAAGATGGGACATGCACAGTGACCTACCTGC...TGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp GACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAGCTCCAGAGGGGCTGTaGACCTTTGCATCAATCTTG +
Preference number: 4 (lower is better)
Translates to: DPQEFHSVLSVQIIIFQKAPEGL*TFASIL
Trigger: CAAGATTGATGCAAAGGTGCACAGCCCCTCTGGAGC...TTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CTTCTCAGCCCCCTGAACAAGCTTGCATTTCTTAAGATTCTCCAATATGTCCCTTTACTGGCATCTCCCTaGGCCTTGTCAACACTCACT +
Preference number: 4 (lower is better)
Translates to: LLSPLNKLAFLKILQYVPLLASP*ALSTLT
Trigger: AGTGAGTGTTGACAAGGCCCAGGGAGATGCCAGTAA...AGGGACATATTGGAGAATCTTAAGAAATGCAAGCTTGTTCAGGGGGCTGAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp AGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCACTTCTCTCCACACCTaGCCCAAACACTTTGACCTT +
Preference number: 4 (lower is better)
Translates to: SHLLCQMTTKLGVPFFSATSLHT*PKHFDL
Trigger: AAGGTCAAAGTGTTTGGGCCAGGTGTGGAGAGAAGT...GGCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp AGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGTGACCTTGCTGGGATCTGGTaGCAGCGAGGCCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: RSFILSCLYRSLFSRKSDLAGIW*QRGLHC
Trigger: ACAGTGGAGGCCTCGCTGCCACCAGATCCCAGCAAG...GTCACTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGACTCCCCGGGTTTTGTaGGAAGGTAAGAGACGGAGC +
Preference number: 4 (lower is better)
Translates to: PQEFHSVLSVQIIIFQKKTPRVL*EGKRRS
Trigger: GCTCCGTCTCTTACCTTCCCACAAAACCCGGGGAGT...CTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGCATCACCCGTCTGTGTaGCTCGGATGCGATAAGGAG +
Preference number: 4 (lower is better)
Translates to: PQEFHSVLSVQIIIFQKKHHPSV*LGCDKE
Trigger: CTCCTTATCGCATCCGAGCCACACAGACGGGTGATG...CTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGACACGACCCATTTTTATaGTCATCGAATGTAATCTCG +
Preference number: 4 (lower is better)
Translates to: QWLVCSTKSSGLHLVYSGHDPFL*SSNVIS
Trigger: CGAGATTACATTCGATGACCATAAAAATGGGTCGTG...TCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TCCCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGCAAAGGATGCTGGCTaGTTAACTTTTAATCCCGAT +
Preference number: 4 (lower is better)
Translates to: SQLSGQRPAGVSFCPVCTAKDAG*LTFNPD
Trigger: ATCGGGATTAAAAGTTAACCAGCCAGCATCCTTTGC...TGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCCACATTTTAACCTTGGATaGGCCTTCGATGGTGACGGA +
Preference number: 4 (lower is better)
Translates to: SSPLPNDNQTRCPLFLCPHFNLG*AFDGDG
Trigger: TCCGTCACCATCGAAGGCCCATCCAAGGTTAAAATG...TGGGCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp AGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGTGACAGAGACATGTGGGCCTaGCTGCCACTCTGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: RSFILSCLYRSLFSRKSDRDMWA*LPLCPL
Trigger: CAGAGGGCAGAGTGGCAGCCAGGCCCACATGTCTCT...GTCACTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp AGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCCGTTTGATTCCAGTTTaGCTTCCGTGTCCCAGCTTA +
Preference number: 4 (lower is better)
Translates to: SHLLCQMTTKLGVPFFSARLIPV*LPCPSL
Trigger: TAAGCTGGGACACGGAAGCCAAACTGGAATCAAACG...GGCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
3UTR CAA 72 bp ATAAGATACAATTTACAGTCGGCGTTTGATTCCAGTTaGGCTTCCGTGTCCCAGCTTACAACACCCGTGGTC +
Preference number: 4 (lower is better)
Translates to: IRYNLQSAFDSS*ASVSQLTTPVV
Trigger: GACCACGGGTGTTGTAAGCTGGGACACGGAAGCCAAACTGGAATCAAACGCCGACTGTAAATTGTATCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAACTTTGGTGTCAACCTTaGAATCTGTGGTCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: DPQEFHSVLSVQIIIFQKLWCQP*NLWSPG
Trigger: TCCGGGAGACCACAGATTTCAAGGTTGACACCAAAG...TTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CTTCTCAGCCCCCTGAACAAGCTTGCATTTCTTAAGATTCTCCAATATGTCCCTCCTTGGGCCAGTATTTaGCATCACACGATCCATCAT +
Preference number: 4 (lower is better)
Translates to: LLSPLNKLAFLKILQYVPPWASI*HHTIHH
Trigger: ATGATGGATCGTGTGATGTCAAATACTGGCCCAAGG...AGGGACATATTGGAGAATCTTAAGAAATGCAAGCTTGTTCAGGGGGCTGAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp AGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGTGACCAGCAATGGTGTGCTTaGTGGCCTTCACCGGGGTGT +
Preference number: 4 (lower is better)
Translates to: RSFILSCLYRSLFSRKSDQQWCA*WPSPGC
Trigger: ACACCCCGGTGAAGGCCATCAAGCACACCATTGCTG...GTCACTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp ATTCTCCAATATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTAACACTTTGACCTTCTaGGGATGGCTACCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: ILQYVPQESSLGLISEGINTLTF*GWLPCP
Trigger: CGGGCAAGGTAGCCATCCTCAGAAGGTCAAAGTGTT...AATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATATTGGAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CACTTTAACCTCATTCCAAAGCCAGCTCAGGTCTGCAGGAAGGCAGGCAAAATTATCAGCATATTTAACTaGGACCATGTAAGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: HFNLIPKPAQVCRKAGKIISIFN*DHVRSL
Trigger: GAGGGACCTTACATGGTCTCAGTTAAATATGCTGAT...AATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGGAATGAGGTTAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTTTACAACAGCATCTTCATTCTCAATaGCATCGGCCTCGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: YVPQESSLGLISEGILQQHLHSQ*HRPRPQ
Trigger: CTGAGGCCGAGGCCGATGTCATTGAGAATGAAGATG...CTGTTGTAAAATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TCATTCCAAAGCCAGCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTTCTAGGACTTATTTCTaGAGGCATTTTACAACAGCA +
Preference number: 4 (lower is better)
Translates to: SFQSQLRSAGRQAKFPTPSRTYF*RHFTTA
Trigger: TGCTGTTGTAAAATGCCTTCAGAAATAAGTCCTAGA...AGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp ACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCATTCCAAAGCATCCATGGGCCCCTCTaGGATCACTTTAAACATTTT +
Preference number: 4 (lower is better)
Translates to: TTHLGSGNVPDTLTSFQSIHGPL*DHFKHF
Trigger: AAAATGTTTAAAGTGATCTCAGAGGGGCCCATGGAT...GCTTTGGAATGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp GACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAATCATCTGGATGTCAATaGGTTGGCCTTCCCCATCCT +
Preference number: 4 (lower is better)
Translates to: DPQEFHSVLSVQIIIFQKSSGCQ*VGLPHP
Trigger: AGGATGGGGAAGGCCAACGCATTGACATCCAGATGA...TTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAAACCTAGGGGATTTCCTGAGATaGAAAGAGAACTTTGATAGT +
Preference number: 4 (lower is better)
Translates to: YYTCHKSGHFLRTKQQNLGDFLR*KENFDS
Trigger: ACTATCAAAGTTCTCTTTGCATCTCAGGAAATCCCC...TAGGTTTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp AAGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCACTGGCAGTCACTTTaGTGGCATCATATGTGGGAA +
Preference number: 4 (lower is better)
Translates to: KSSPLPNDNQTRCPLFLCHWQSL*WHHMWE
Trigger: TTCCCACATATGATGCCAGCAAAGTGACTGCCAGTG...GCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTTAAGTCATCTCCTTTaGCAAATGACAACCAAACTA +
Preference number: 4 (lower is better)
Translates to: CLLQWLVCSTKSSGLHLVLSHLL*QMTTKL
Trigger: TAGTTTGGTTGTCATTTGGCAAAGGAGATGACTTAA...CACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp AGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCGAAACTGCTCGCCACTaGAGAATTTCTTCAGACCAA +
Preference number: 4 (lower is better)
Translates to: SHLLCQMTTKLGVPFFSAETARH*RISSDQ
Trigger: TTGGTCTGAAGAAATTCTGCAGTGGCGAGCAGTTTC...GGCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp AGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGTGACGTAGCCTCCCGTGGCTaGGTGGATGAAGGCCATGTA +
Preference number: 4 (lower is better)
Translates to: RSFILSCLYRSLFSRKSDVASRG*VDEGHV
Trigger: TACATGGCCTTCATCCACCCAGCCACGGGAGGCTAC...GTCACTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp ATTCTCCAATATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTCGCCACCATACTTCATaGTCAACGTGTACATGCCGG +
Preference number: 4 (lower is better)
Translates to: ILQYVPQESSLGLISEGIRHHTS*STCTCR
Trigger: CCGGCATGTACACGTTGACCATGAAGTATGGTGGCG...AATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATATTGGAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAATATTGTCATGGACAATaGCTCTTTTGGGTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: PDTTPATRVATSSGLSSKYCHGQ*LFWVFL
Trigger: AAGGAAAACCCAAAAGAGCCATTGTCCATGACAATA...TTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGGCGATAAGGAGAAAGTaGGATGTCGTCACCCCCGTA +
Preference number: 4 (lower is better)
Translates to: PQEFHSVLSVQIIIFQKKAIRRK*DVVTPV
Trigger: TACGGGGGTGACGACATCCCACTTTCTCCTTATCGC...CTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGTGCCAATGTGGTTGTTaGGCAGCCTCTTCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: PQEFHSVLSVQIIIFQKKCQCGC*AASSGD
Trigger: GTCTCCTGAAGAGGCTGCCCAACAACCACATTGGCA...CTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp ACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCATTCCAAAGCACTGCTGTTGATTTCTaGGATTTTCAGGTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: TTHLGSGNVPDTLTSFQSTAVDF*DFQVQV
Trigger: GACCTGAACCTGAAAATCCCAGAAATCAACAGCAGT...GCTTTGGAATGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp ATTCTCCAATATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTAATGCTGAACTCAGCTaGGACTCCCGCTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: ILQYVPQESSLGLISEGINAELS*DSRFSS
Trigger: AGAGGAGAAGCGGGAGTCCCAGCTGAGTTCAGCATT...AATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATATTGGAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTGGAGCGTGTGGGACTGAAACGGACTTaGAAAACTAAAGCAAAACCA +
Preference number: 4 (lower is better)
Translates to: HFKHFGKTAQADEGLERVGLKRT*KTKAKP
Trigger: TGGTTTTGCTTTAGTTTTCCAAGTCCGTTTCAGTCC...CACACGCTCCAGCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGCTGGCGGGGATTTCCTaGGATGCAAAGAGAACTTTG +
Preference number: 4 (lower is better)
Translates to: PQEFHSVLSVQIIIFQKKLAGIS*DAKRTL
Trigger: CAAAGTTCTCTTTGCATCTCAGGAAATCCCCGCCAG...CTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp AAGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCTTTCAATGTCAGCTTTaGAGGGAGACCCAGGTATGT +
Preference number: 4 (lower is better)
Translates to: KSSPLPNDNQTRCPLFLCFQCQL*RETQVC
Trigger: ACATACCTGGGTCTCCCTTCAAAGCTGACATTGAAA...GCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGTCTTGGTCCGTTATTTaGACAGCAAGCAGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: PQEFHSVLSVQIIIFQKKSWSVI*TASRPS
Trigger: GGAAGGCCTGCTTGCTGTTCAAATAACGGACCAAGA...CTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTTTACAACAGCTCAGGCAACGTCCCTaGCACTTTAACCTCATTCCA +
Preference number: 4 (lower is better)
Translates to: YVPQESSLGLISEGILQQLRQRP*HFNLIP
Trigger: TGGAATGAGGTTAAAGTGTCAGGGACGTTGCCTGAG...CTGTTGTAAAATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTTTACAACAGGTGAACTTGGCTGGCTaGTTCACCATGTTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: YVPQESSLGLISEGILQQVNLAG*FTMFPV
Trigger: CACTGGAAACATGGTGAAGCAGCCAGCCAAGTTCAC...CTGTTGTAAAATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp GACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAGGGGTAATACTCGAATaGGTAGACCCCATCCAGAAA +
Preference number: 4 (lower is better)
Translates to: DPQEFHSVLSVQIIIFQKGVILE*VDPIQK
Trigger: TTTCTGGATGGGGTCTACGCATTCGAGTATTACCCC...TTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp AGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGTGACAAGCCCACCAATTCCTaGGCCTCTGGTAACCACGGT +
Preference number: 4 (lower is better)
Translates to: RSFILSCLYRSLFSRKSDKPTNS*ASGNHG
Trigger: ACCGTGGTTACCAGAGGCGCAGGAATTGGTGGGCTT...GTCACTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp ATTCTCCAATATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTGTCCCTCAACAGTTATaGCAAGCCCACCAATTCCTG +
Preference number: 4 (lower is better)
Translates to: ILQYVPQESSLGLISEGIVPQQL*QAHQFL
Trigger: CAGGAATTGGTGGGCTTGGCATAACTGTTGAGGGAC...AATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATATTGGAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CCCTCTGAGATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCATCAATCTTGCCTTTTaGGCCATTCAACCTTATAGC +
Preference number: 4 (lower is better)
Translates to: PSEITLNILVRLPRLMKGINLAF*AIQPYS
Trigger: GCTATAAGGTTGAATGGCGCAAAAGGCAAGATTGAT...GCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGATCTCAGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp AAGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCCTTTGCATCAATCTTaGCTTTTGCGCCATTCAACC +
Preference number: 4 (lower is better)
Translates to: KSSPLPNDNQTRCPLFLCPLHQS*LLRHST
Trigger: GGTTGAATGGCGCAAAAGGCAAGATTGATGCAAAGG...GCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp AGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGTGACTCCTGGTCTGTCTGCTaGAGTGGCTGGTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: RSFILSCLYRSLFSRKSDSWSVC*SGWSVP
Trigger: TGGAACAGACCAGCCACTGCAGCAGACAGACCAGGA...GTCACTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp CCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCATTAAGTCATCTCCTTTaGCAAATGACAACCAAACTA +
Preference number: 4 (lower is better)
Translates to: PDHTTHLGSGNVPDTLTSLSHLL*QMTTKL
Trigger: TAGTTTGGTTGTCATTTGGCAAAGGAGATGACTTAA...TGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp AGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGTGACCCACCAATAAGCTGCTaGCCTTCTCTCCCCCAACCA +
Preference number: 4 (lower is better)
Translates to: RSFILSCLYRSLFSRKSDPPISC*PSLPQP
Trigger: TGGTTGGGGGAGAGAAGGGCAGCAGCTTATTGGTGG...GTCACTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGTCACCATGTTTCCAGTaGGCTCGATTCCTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: PQEFHSVLSVQIIIFQKKSPCFQ*ARFLCH
Trigger: ATGGCAGAGGAATCGAGCCCACTGGAAACATGGTGA...CTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAATCCGGTTCTTCATCTaGATGTCAATGCGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: DPQEFHSVLSVQIIIFQKIRFFI*MSMRWP
Trigger: AGGCCAACGCATTGACATCCAGATGAAGAACCGGAT...TTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGATCTTCTATTGTCATGGACAATaGCTCTTTTGGGTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: AGLFHQEFWFAPSVLRIFYCHGQ*LFWVFL
Trigger: AAGGAAAACCCAAAAGAGCCATTGTCCATGACAATA...GAAGATCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp GACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAATTCCCAGAAGGCATGTaGACCTCTCCAGTGATTTCT +
Preference number: 4 (lower is better)
Translates to: DPQEFHSVLSVQIIIFQKFPEGM*TSPVIS
Trigger: AGAAATCACTGGAGAGGTCCACATGCCTTCTGGGAA...TTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp ACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCATTCCAAAGCTCTAGGACTTATTTCTaGAGGCATTTTACAACAGCA +
Preference number: 4 (lower is better)
Translates to: TTHLGSGNVPDTLTSFQSSRTYF*RHFTTA
Trigger: TGCTGTTGTAAAATGCCTTCAGAAATAAGTCCTAGA...GCTTTGGAATGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAATTTTCCAGAAAAAGTaGCCCATGAAGTTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: DPQEFHSVLSVQIIIFQKIFQKK*PMKLAG
Trigger: CCCAGCCAACTTCATGGGTCACTTTTTCTGGAAAAT...TTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp AGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCGGGGATTTCCTGAGATaGAAAGAGAACTTTGATAGT +
Preference number: 4 (lower is better)
Translates to: SHLLCQMTTKLGVPFFSAGDFLR*KENFDS
Trigger: ACTATCAAAGTTCTCTTTGCATCTCAGGAAATCCCC...GGCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp GACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAACCTTTGCATCAATCTTaGCTTTTGCGCCATTCAACC +
Preference number: 4 (lower is better)
Translates to: DPQEFHSVLSVQIIIFQKPLHQS*LLRHST
Trigger: GGTTGAATGGCGCAAAAGGCAAGATTGATGCAAAGG...TTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp AGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGTGACCCCAGATACTACACCTaGCACAAGAGTGGCCACTTC +
Preference number: 4 (lower is better)
Translates to: RSFILSCLYRSLFSRKSDPRYYT*HKSGHF
Trigger: GAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGG...GTCACTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGAGTAGGTGGGCTTATTaGCGATGTTCCCTACAGCTT +
Preference number: 4 (lower is better)
Translates to: PQEFHSVLSVQIIIFQKKSRWAY*RCSLQL
Trigger: AAGCTGTAGGGAACATCGCCAATAAGCCCACCTACT...CTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp ATTCTCCAATATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTACTTCTCTCCACACCTaGCCCAAACACTTTGACCTT +
Preference number: 4 (lower is better)
Translates to: ILQYVPQESSLGLISEGITSLHT*PKHFDL
Trigger: AAGGTCAAAGTGTTTGGGCCAGGTGTGGAGAGAAGT...AATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATATTGGAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp TATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTTTACAACAGGTCACCTCCACTACATaGAGACCTTTCTCAAAGGGT +
Preference number: 4 (lower is better)
Translates to: YVPQESSLGLISEGILQQVTSTT*RPFSKG
Trigger: ACCCTTTGAGAAAGGTCTCCATGTAGTGGAGGTGAC...CTGTTGTAAAATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp AGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGTGACCCTTCCCGGCAGTCTTaGCATCAACCACAAAGCCTA +
Preference number: 4 (lower is better)
Translates to: RSFILSCLYRSLFSRKSDPSRQS*HQPQSL
Trigger: TAGGCTTTGTGGTTGATGCCAAGACTGCCGGGAAGG...GTCACTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp AAGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCAAACACTTCCACTGTTaGGGTAGTTCACGTAGAACT +
Preference number: 4 (lower is better)
Translates to: KSSPLPNDNQTRCPLFLCKHFHC*GSSRRT
Trigger: AGTTCTACGTGAACTACCCCAACAGTGGAAGTGTTT...GCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp AGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGTGACTGCCAATGTGGTTGTTaGGCAGCCTCTTCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: RSFILSCLYRSLFSRKSDCQCGC*AASSGD
Trigger: GTCTCCTGAAGAGGCTGCCCAACAACCACATTGGCA...GTCACTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp AGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCCACGACCCATTTTTATaGTCATCGAATGTAATCTCG +
Preference number: 4 (lower is better)
Translates to: SHLLCQMTTKLGVPFFSAHDPFL*SSNVIS
Trigger: CGAGATTACATTCGATGACCATAAAAATGGGTCGTG...GGCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp ATTCTCCAATATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTCCTACACCTCATTTCTaGATTTCTGCACCACACAGC +
Preference number: 4 (lower is better)
Translates to: ILQYVPQESSLGLISEGIPTPHF*ISAPHS
Trigger: GCTGTGTGGTGCAGAAATCCAGAAATGAGGTGTAGG...AATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATATTGGAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTTTACAACAGTTTCAATGTCAGCTTTaGAGGGAGACCCAGGTATGT +
Preference number: 4 (lower is better)
Translates to: YVPQESSLGLISEGILQQFQCQL*RETQVC
Trigger: ACATACCTGGGTCTCCCTTCAAAGCTGACATTGAAA...CTGTTGTAAAATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAATCCATGGGCCCCTCTaGGATCACTTTAAACATTTT +
Preference number: 4 (lower is better)
Translates to: DPQEFHSVLSVQIIIFQKIHGPL*DHFKHF
Trigger: AAAATGTTTAAAGTGATCTCAGAGGGGCCCATGGAT...TTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp AGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGTGACGGGGCTGTGCACCTTTaGATCAATCTTGCCTTTTGC +
Preference number: 4 (lower is better)
Translates to: RSFILSCLYRSLFSRKSDGAVHL*INLAFC
Trigger: GCAAAAGGCAAGATTGATGCAAAGGTGCACAGCCCC...GTCACTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCATTAAGTCATCTCCTTTaGCAAATGACAACCAAACTA +
Preference number: 4 (lower is better)
Translates to: SAGRQAKFPTPHFWISAPLSHLL*QMTTKL
Trigger: TAGTTTGGTTGTCATTTGGCAAAGGAGATGACTTAA...TGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR GCA 90 bp TATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTTTACAACAGGAAACTGCTCGCCACTaGAGAATTTCTTCAGACCAA +
Preference number: 4 (lower is better)
Translates to: YVPQESSLGLISEGILQQETARH*RISSDQ
Trigger: TTGGTCTGAAGAAATTCTGCAGTGGCGAGCAGTTTC...CTGTTGTAAAATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp AGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGTGACCCACTTCAGAGCCAATaGATTCTACCACGAAGTCCG +
Preference number: 4 (lower is better)
Translates to: RSFILSCLYRSLFSRKSDPLQSQ*ILPRSP
Trigger: CGGACTTCGTGGTAGAATCCATTGGCTCTGAAGTGG...GTCACTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CTTCTCAGCCCCCTGAACAAGCTTGCATTTCTTAAGATTCTCCAATATGTCCCTTTTCCCTTCTATTCCTaGTCCAAAGACTTTGATCCT +
Preference number: 4 (lower is better)
Translates to: LLSPLNKLAFLKILQYVPFPFYS*SKDFDP
Trigger: AGGATCAAAGTCTTTGGACCAGGAATAGAAGGGAAA...AGGGACATATTGGAGAATCTTAAGAAATGCAAGCTTGTTCAGGGGGCTGAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp AGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGTGACTCCATACACGAGGCCTaGACCGTATGCAGAAACACT +
Preference number: 4 (lower is better)
Translates to: RSFILSCLYRSLFSRKSDSIHEA*TVCRNT
Trigger: AGTGTTTCTGCATACGGTCCAGGCCTCGTGTATGGA...GTCACTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp AAGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCGGACTGAAACGGACTTaGAAAACTAAAGCAAAACCA +
Preference number: 4 (lower is better)
Translates to: KSSPLPNDNQTRCPLFLCGLKRT*KTKAKP
Trigger: TGGTTTTGCTTTAGTTTTCCAAGTCCGTTTCAGTCC...GCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp AGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGTGACTGGAGTGTTATGTCATaGGACGGACCTTGGGATGAG +
Preference number: 4 (lower is better)
Translates to: RSFILSCLYRSLFSRKSDWSVMS*DGPWDE
Trigger: CTCATCCCAAGGTCCGTCCCATGACATAACACTCCA...GTCACTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp GACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAATTTATCTTCGACTCTaGTGGTCCCTCAACAGTTAT +
Preference number: 4 (lower is better)
Translates to: DPQEFHSVLSVQIIIFQKIYLRL*WSLNSY
Trigger: ATAACTGTTGAGGGACCATCAGAGTCGAAGATAAAT...TTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp CCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGATCAGCATATTTAACTaGGACCATGTAAGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: PQEFHSVLSVQIIIFQKKISIFN*DHVRSL
Trigger: GAGGGACCTTACATGGTCTCAGTTAAATATGCTGAT...CTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp AGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGTGACATCCGGTTCTTCATCTaGATGTCAATGCGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: RSFILSCLYRSLFSRKSDIRFFI*MSMRWP
Trigger: AGGCCAACGCATTGACATCCAGATGAAGAACCGGAT...GTCACTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp CCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGAAACACTTCCACTGTTaGGGTAGTTCACGTAGAACT +
Preference number: 4 (lower is better)
Translates to: PQEFHSVLSVQIIIFQKKKHFHC*GSSRRT
Trigger: AGTTCTACGTGAACTACCCCAACAGTGGAAGTGTTT...CTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp AGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGTGACGCCCCACAAACAGGCTaGAGGGCTTTGTATAAAATG +
Preference number: 4 (lower is better)
Translates to: RSFILSCLYRSLFSRKSDAPQTG*RALYKM
Trigger: CATTTTATACAAAGCCCTCCAGCCTGTTTGTGGGGC...GTCACTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CCA 90 bp AGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGTGACCGTTTGATTCCAGTTTaGCTTCCGTGTCCCAGCTTA +
Preference number: 4 (lower is better)
Translates to: RSFILSCLYRSLFSRKSDRLIPV*LPCPSL
Trigger: TAAGCTGGGACACGGAAGCCAAACTGGAATCAAACG...GTCACTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR TCA 90 bp TATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTTTACAACAGGTATCATTGGCATTGTaGATAATGTCAAAATCCACG +
Preference number: 4 (lower is better)
Translates to: YVPQESSLGLISEGILQQVSLAL*IMSKST
Trigger: CGTGGATTTTGACATTATTCACAATGCCAATGATAC...CTGTTGTAAAATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS TCA 90 bp GCTGCTGTCCACCGTGAAGGACTGCAGGACACGGGCTCGGACGCCTaGGCCCAGCCCGGGGCCGGCAATCTTGACCTTGCTGGGGTCCAC +
Preference number: 5 (lower is better)
Translates to: AAVHREGLQDTGSDA*AQPGAGNLDLAGVH
Trigger: GTGGACCCCAGCAAGGTCAAGATTGCCGGCCCCGGGCTGGGCTCAGGCGTCCGAGCCCGTGTCCTGCAGTCCTTCACGGTGGACAGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS TCA 90 bp TGGGGAGTCTGGCAGCACTCACACCACCCCTGTGGGTGGCTTTGCTaGGGCCACTGCTTTGGCCAGAGTCCCGGGCAGCCTGCCAGCCCA +
Preference number: 5 (lower is better)
Translates to: WGVWQHSHHPCGWLC*GHCFGQSPGQPASP
Trigger: TGGGCTGGCAGGCTGCCCGGGACTCTGGCCAAAGCAGTGGCCTCAGCAAAGCCACCCACAGGGGTGGTGTGAGTGCTGCCAGACTCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CCA 90 bp GCACTCACACCACCCCTGTGGGTGGCTTTGCTGAGGCCACTGCTTTaGCCAGAGTCCCGGGCAGCCTGCCAGCCCACCAGTCACTCCTGC +
Preference number: 5 (lower is better)
Translates to: ALTPPLWVALLRPLL*PESRAACQPTSHSC
Trigger: GCAGGAGTGACTGGTGGGCTGGCAGGCTGCCCGGGACTCTGGCCAAAGCAGTGGCCTCAGCAAAGCCACCCACAGGGGTGGTGTGAGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS GCA 90 bp GCAGCTGCTGTGAGGCCTGGCCTGAAGCCTGCCACGCGCTCCAAGTaGCGAGAGGACCCCACCTGGGCCCTCAAAGGTGAGTACCTTGTC +
Preference number: 5 (lower is better)
Translates to: AAAVRPGLKPATRSK*REDPTWALKGEYLV
Trigger: GACAAGGTACTCACCTTTGAGGGCCCAGGTGGGGTCCTCTCGGCACTTGGAGCGCGTGGCAGGCTTCAGGCCAGGCCTCACAGCAGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CCA 90 bp AAGCCGCAGGCCCAGAGTTCAGCGTGGAGCCGGGCTGGATTTGCCTaGGGAGTCTGGCAGCACTCACACCACCCCTGTGGGTGGCTTTGC +
Preference number: 5 (lower is better)
Translates to: KPQAQSSAWSRAGFA*GVWQHSHHPCGWLC
Trigger: GCAAAGCCACCCACAGGGGTGGTGTGAGTGCTGCCAGACTCCCCAGGCAAATCCAGCCCGGCTCCACGCTGAACTCTGGGCCTGCGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CCA 90 bp GGCCTGAAGCCTGCCACGCGCTCCAAGTGCCGAGAGGACCCCACCTaGGCCCTCAAAGGTGAGTACCTTGTCAGGGCCCAAGTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: GLKPATRSKCREDPT*ALKGEYLVRAQVPA
Trigger: TGCTGGCACTTGGGCCCTGACAAGGTACTCACCTTTGAGGGCCCAGGTGGGGTCCTCTCGGCACTTGGAGCGCGTGGCAGGCTTCAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS-3UTR CAA 90 bp TCACCAGAGCGAGGGGACAGGTACTTGAGAGACATGTGGGCCTGGCTGCCACTCACGGCGGGCTCCACCTaGACCCGGGCGGGGAAGTGT +
Preference number: 5 (lower is better)
Translates to: SPERGDRYLRDMWAWLPLTAGST*TRAGKC
Trigger: ACACTTCCCCGCCCGGGTCAAGGTGGAGCCCGCCGT...GAGTGGCAGCCAGGCCCACATGTCTCTCAAGTACCTGTCCCCTCGCTCTGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS TCA 90 bp GGCCGCATGCGGGGCACGGAGCACTGCCATCACCTAGAGCCAGTATaGAACTGCACCCTCCAGCCCCACAGGATCTGGGCAGAGCAGTTC +
Preference number: 5 (lower is better)
Translates to: GRMRGTEHCHHLEPV*NCTLQPHRIWAEQF
Trigger: GAACTGCTCTGCCCAGATCCTGTGGGGCTGGAGGGTGCAGTTTCATACTGGCTCTAGGTGATGGCAGTGCTCCGTGCCCCGCATGCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470231.1
CDS GCA 90 bp AGAAGCAGAAGAGTGGGTTACCTGTGGTGCCCCCTTCGAGTCCCGTaGCATAGGCGGACACCAGGGCAGGGTTCCCCGCTTGTCCAGGCT +
Preference number: 5 (lower is better)
Translates to: RSRRVGYLWCPLRVP*HRRTPGQGSPLVQA
Trigger: AGCCTGGACAAGCGGGGAACCCTGCCCTGGTGTCCGCCTATGGCACGGGACTCGAAGGGGGCACCACAGGTAACCCACTCTTCTGCTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475487.1
CDS GCA 90 bp AGCTGCCCCTGCCTGGGGCAGATGAATGTCTGCAGGAAGGCAGGGTaGACACTTACCTCGTGGGCCCAGAACCCTCACTTCCAGCGGAGC +
Preference number: 5 (lower is better)
Translates to: SCPCLGQMNVCRKAG*TLTSWAQNPHFQRS
Trigger: GCTCCGCTGGAAGTGAGGGTTCTGGGCCCACGAGGTAAGTGTGCACCCTGCCTTCCTGCAGACATTCATCTGCCCCAGGCAGGGGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS CCA 90 bp GCTGGTGTCCACGGCGGGCTCCACCTTGACCCGGGCGGGGAAGTGTaGCACGAGTTCGCCACCATACTTCATGGTCAACGTGTACATGCC +
Preference number: 5 (lower is better)
Translates to: AGVHGGLHLDPGGEV*HEFATILHGQRVHA
Trigger: GGCATGTACACGTTGACCATGAAGTATGGTGGCGAACTCGTGCCACACTTCCCCGCCCGGGTCAAGGTGGAGCCCGCCGTGGACACCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS-3UTR CAA 90 bp CTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGATGAGGGCGTTCCGTGGGCCTTCACCTaGCTGGGATCTGGTGGCAGC +
Preference number: 5 (lower is better)
Translates to: LGRVWSVMSWDGPWDEGVPWAFT*LGSGGS
Trigger: GCTGCCACCAGATCCCAGCAAGGTGAAGGCCCACGG...AACGCCCTCATCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp ATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGAGGCAGGGTTCCCCGCTaGTCCAGGCTCCCCAACGCG +
Preference number: 5 (lower is better)
Translates to: MKLAGAGVECYVMGRTLGGRVPR*SRLPNA
Trigger: CGCGTTGGGGAGCCTGGACAAGCGGGGAACCCTGCC...TCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAGCCAACTTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS TCA 90 bp CAGAGACCCCACTTCAGAGCCAATGGATTCTACCACGAAGTCCGCTaGCCGCCCGACAATCCCACCATGGAGCCCAGGGCCCCAAGCACG +
Preference number: 5 (lower is better)
Translates to: QRPHFRANGFYHEVR*PPDNPTMEPRAPST
Trigger: CGTGCTTGGGGCCCTGGGCTCCATGGTGGGATTGTCGGGCGGTCAGCGGACTTCGTGGTAGAATCCATTGGCTCTGAAGTGGGGTCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682097.1
ENST00000682868.1
ENST00000682871.1
ENST00000682987.1
ENST00000683511.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS TCA 90 bp GCGAACAGCCAAAAGGAAATGGGAGAGGGCCCAGGCACAGCGGCATaGGCCAGCAGGAGGGTGAGATGCTTCCTGGCCAGTGTGGGAGAC +
Preference number: 5 (lower is better)
Translates to: ANSQKEMGEGPGTAA*ASRRVRCFLASVGD
Trigger: GTCTCCCACACTGGCCAGGAAGCATCTCACCCTCCTGCTGGCTCATGCCGCTGTGCCTGGGCCCTCTCCCATTTCCTTTTGGCTGTTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS GCA 90 bp TCCGAGCAGTCGACGCTAAGGAGGCCAGCTTCACCCACCTTCCCGTaGTCGAGACCTGGCCCCGATGCCACGACTTTAGAGGGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: SEQSTLRRPASPTFP*SRPGPDATTLEGSK
Trigger: CTTTGACCCCTCTAAAGTCGTGGCATCGGGGCCAGGTCTCGAGCACGGGAAGGTGGGTGAAGCTGGCCTCCTTAGCGTCGACTGCTCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS GCA 90 bp GGGCCCTCAAAGGTGAGTACCTTGTCAGGGCCCAAGTGCCAGCACTaGTGCCTGGAAAGTACTCCTGAGTGGCTGGGAGGACAGGGGTCC +
Preference number: 5 (lower is better)
Translates to: GPSKVSTLSGPKCQH*CLESTPEWLGGQGS
Trigger: GGACCCCTGTCCTCCCAGCCACTCAGGAGTACTTTCCAGGCAGCAGTGCTGGCACTTGGGCCCTGACAAGGTACTCACCTTTGAGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS GCA 90 bp TCACCCCAGGCACTGTGCTGCAGACCGGGTGCAGCCACTGTGACCTaGCAGCCCACCCACTTTGCCGTGAATTCCAGCAACAAGCACAGG +
Preference number: 5 (lower is better)
Translates to: SPQALCCRPGAATVT*QPTHFAVNSSNKHR
Trigger: CCTGTGCTTGTTGCTGGAATTCACGGCAAAGTGGGTGGGCTGGCAGGTCACAGTGGCTGCACCCGGTCTGCAGCACAGTGCCTGGGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS GCA 90 bp TGGCTGAGGGCAAGAAGCCTGAGTCACACTGTGAGCCTGAAGTGCTaGTTCAGCCACCAGAGTCCAGCTCTCCCTCCAGGGGTGTGGGGG +
Preference number: 5 (lower is better)
Translates to: WLRARSLSHTVSLKC*FSHQSPALPPGVWG
Trigger: CCCCCACACCCCTGGAGGGAGAGCTGGACTCTGGTGGCTGAAGCAGCACTTCAGGCTCACAGTGTGACTCAGGCTTCTTGCCCTCAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CCA 90 bp GGGCAGATGAATGTCTGCAGGAAGGCAGGGTGCACACTTACCTCGTaGGCCCAGAACCCTCACTTCCAGCGGAGCCAGGCCAGCCTTGCT +
Preference number: 5 (lower is better)
Translates to: GQMNVCRKAGCTLTS*AQNPHFQRSQASLA
Trigger: AGCAAGGCTGGCCTGGCTCCGCTGGAAGTGAGGGTTCTGGGCCCACGAGGTAAGTGTGCACCCTGCCTTCCTGCAGACATTCATCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS CCA 90 bp AGCTACCAGCCCAGACTGACATCAGCCTATGGACAGCTGCCCGTGTaGGCCAACAGTAGCACACGTGGCCTCTGGGGCCAACTCCCTGTC +
Preference number: 5 (lower is better)
Translates to: SYQPRLTSAYGQLPV*ANSSTRGLWGQLPV
Trigger: GACAGGGAGTTGGCCCCAGAGGCCACGTGTGCTACTGTTGGCCCACACGGGCAGCTGTCCATAGGCTGATGTCAGTCTGGGCTGGTAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682097.1
CDS-3UTR CAA 90 bp TGGGACGGACCTTGGGATGAGGGCGTTAATCCATGGGCCCCTCTGAGATCACTTCCTCCTGCCCGCACCTaGTGGGCGCCTCCTTCACCA +
Preference number: 5 (lower is better)
Translates to: WDGPWDEGVNPWAPLRSLPPART*WAPPSP
Trigger: TGGTGAAGGAGGCGCCCACAAGGTGCGGGCAGGAGG...AAGTGATCTCAGAGGGGCCCATGGATTAACGCCCTCATCCCAAGGTCCGTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTACCCCGGCAGGGTTCCCCGCTaGTCCAGGCTCCCCAACGCG +
Preference number: 5 (lower is better)
Translates to: LSHQAPGCSTFCRVGFYPGRVPR*SRLPNA
Trigger: CGCGTTGGGGAGCCTGGACAAGCGGGGAACCCTGCC...GGGGTAAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS TCA 90 bp CCGTTAAGCCCAGACCTCCAGTACCAGCTCCTTTGGTATCGATGGTaGACTCGGCAGGCTTGCCCACGAGACCACCTTCGAGGCCGGGAC +
Preference number: 5 (lower is better)
Translates to: PLSPDLQYQLLWYRW*TRQACPRDHLRGRD
Trigger: GTCCCGGCCTCGAAGGTGGTCTCGTGGGCAAGCCTGCCGAGTTCACCATCGATACCAAAGGAGCTGGTACTGGAGGTCTGGGCTTAACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS TCA 90 bp CGTGAATTCCAGCAACAAGCACAGGAACAGAACAGCAGCTCCCGCTaGCGGGGCATGCGTACCCCACTCCGGCTCCAGGTCCTGTGCACA +
Preference number: 5 (lower is better)
Translates to: REFQQQAQEQNSSSR*RGMRTPLRLQVLCT
Trigger: TGTGCACAGGACCTGGAGCCGGAGTGGGGTACGCATGCCCCGTCAGCGGGAGCTGCTGTTCTGTTCCTGTGCTTGTTGCTGGAATTCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS GCA 90 bp CCCTCAAAGGTGAGTACCTTGTCAGGGCCCAAGTGCCAGCACTGCTaGCTGGAAAGTACTCCTGAGTGGCTGGGAGGACAGGGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: PSKVSTLSGPKCQHC*LESTPEWLGGQGSW
Trigger: CCAGGACCCCTGTCCTCCCAGCCACTCAGGAGTACTTTCCAGGCAGCAGTGCTGGCACTTGGGCCCTGACAAGGTACTCACCTTTGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS GCA 90 bp ACCCCACCTGGGCCCTCAAAGGTGAGTACCTTGTCAGGGCCCAAGTaGCAGCACTGCTGCCTGGAAAGTACTCCTGAGTGGCTGGGAGGA +
Preference number: 5 (lower is better)
Translates to: TPPGPSKVSTLSGPK*QHCCLESTPEWLGG
Trigger: TCCTCCCAGCCACTCAGGAGTACTTTCCAGGCAGCAGTGCTGGCACTTGGGCCCTGACAAGGTACTCACCTTTGAGGGCCCAGGTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS GCA 90 bp GGAGAGCCTCCTTCAGTCATCAGGTCTGGCGCATGCCTGCTACAGTaGCCTCTATGGGGCATGCCTGGCATAGCATCCCCATGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: GEPPSVIRSGACLLQ*PLWGMPGIASPCRA
Trigger: AGCCCTGCATGGGGATGCTATGCCAGGCATGCCCCATAGAGGGCACTGTAGCAGGCATGCGCCAGACCTGATGACTGAAGGAGGCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS GCA 90 bp GGGTCACCAGTGCTAGGACGCAAGACCACATCACTCTCCGTGAGCTaGTCACGTCATGCCAACGACTGTGCCTGCACTGCCGTGGTGAGG +
Preference number: 5 (lower is better)
Translates to: GSPVLGRKTTSLSVS*SRHANDCACTAVVR
Trigger: CCTCACCACGGCAGTGCAGGCACAGTCGTTGGCATGACGTGAGCAGCTCACGGAGAGTGATGTGGTCTTGCGTCCTAGCACTGGTGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682503.1
CDS CCA 90 bp GTTGTTGGGCAGCCTCTTCAGGAGACAGGGCTCGTCTCGGCCAGATaGGGCCTTAATGCTGGCCGTCAGGCTGCTGAGGTCAGTCTCACT +
Preference number: 5 (lower is better)
Translates to: VVGQPLQETGLVSAR*GLNAGRQAAEVSLT
Trigger: AGTGAGACTGACCTCAGCAGCCTGACGGCCAGCATTAAGGCCCCATCTGGCCGAGACGAGCCCTGTCTCCTGAAGAGGCTGCCCAACAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000481470.5
ENST00000490882.5
ENST00000491408.1
ENST00000493452.5
ENST00000682297.1
ENST00000682871.1
ENST00000683925.1
ENST00000684439.1
ENST00000684506.1
ENST00000684607.1
CDS CCA 90 bp ACCATGCCTTTCACAAAAGGCAAGCCGCAGGCCCAGAGTTCAGCGTaGAGCCGGGCTGGATTTGCCTGGGGAGTCTGGCAGCACTCACAC +
Preference number: 5 (lower is better)
Translates to: TMPFTKGKPQAQSSA*SRAGFAWGVWQHSH
Trigger: GTGTGAGTGCTGCCAGACTCCCCAGGCAAATCCAGCCCGGCTCCACGCTGAACTCTGGGCCTGCGGCTTGCCTTTTGTGAAAGGCATGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CCA 90 bp GGCCCAAGTGCCAGCACTGCTGCCTGGAAAGTACTCCTGAGTGGCTaGGAGGACAGGGGTCCTGGTTTAGGACATCCCCAAAGTGGGCTG +
Preference number: 5 (lower is better)
Translates to: GPSASTAAWKVLLSG*EDRGPGLGHPQSGL
Trigger: CAGCCCACTTTGGGGATGTCCTAAACCAGGACCCCTGTCCTCCCAGCCACTCAGGAGTACTTTCCAGGCAGCAGTGCTGGCACTTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CCA 90 bp CGGCAGGCATTTGGATTGCAGGCAAGCAAGAGGCCTCTGGCCCAGTaGTCTCAACTAGGAAGCCAACAGCTTCAGGGTCCAGGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: RQAFGLQASKRPLAQ*SQLGSQQLQGPGWP
Trigger: GGGCCAGCCTGGACCCTGAAGCTGTTGGCTTCCTAGTTGAGACCACTGGGCCAGAGGCCTCTTGCTTGCCTGCAATCCAAATGCCTGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000682097.1
ENST00000683511.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
CDS CCA 90 bp TATGGACAGCTGCCCGTGTGGGCCAACAGTAGCACACGTGGCCTCTaGGGCCAACTCCCTGTCAGCCAGGCTGGCTCAGACTTGATGCTT +
Preference number: 5 (lower is better)
Translates to: YGQLPVWANSSTRGL*GQLPVSQAGSDLML
Trigger: AAGCATCAAGTCTGAGCCAGCCTGGCTGACAGGGAGTTGGCCCCAGAGGCCACGTGTGCTACTGTTGGCCCACACGGGCAGCTGTCCATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682097.1
CDS-3UTR CAA 90 bp CCCAACACTCGCCCCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGCACCATCACGTCTCCTaGCCCGGCGCTGATGGTGTC +
Preference number: 5 (lower is better)
Translates to: PNTRPRYYTCHKSGHFLRHHHVS*PGADGV
Trigger: GACACCATCAGCGCCGGGCAAGGAGACGTGATGGTG...CCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGGGCGAGTGTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGATGAGGGCGTTCGGCAGGCATTTGGATaGCAGGCTTCCCCAACCTGC +
Preference number: 5 (lower is better)
Translates to: LGRVWSVMSWDGPWDEGVRQAFG*QASPTC
Trigger: GCAGGTTGGGGAAGCCTGCAATCCAAATGCCTGCCG...AACGCCCTCATCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TGGGACGGACCTTGGGATGAGGGCGTTAATCCATGGGCCCCTCTGAGATCACTTGGAGCCAGGCCAGCCTaGCTGCTGTCCACCGTGAAG +
Preference number: 5 (lower is better)
Translates to: WDGPWDEGVNPWAPLRSLGARPA*LLSTVK
Trigger: CTTCACGGTGGACAGCAGCAAGGCTGGCCTGGCTCC...AAGTGATCTCAGAGGGGCCCATGGATTAACGCCCTCATCCCAAGGTCCGTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TCTGCCTGCCCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTCCCGTGGCCAGGCACTaGCTGGCATCACCCGTCTGT +
Preference number: 5 (lower is better)
Translates to: SACPDHTTHLGSGNVPDTPVARH*LASPVC
Trigger: ACAGACGGGTGATGCCAGCAAGTGCCTGGCCACGGG...AGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGGGCAGGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS TCA 90 bp CCACTTAGAGAGGGGGCCAAGCTCGGGGGTTCAGCGCATAGGCTCTaGGGTCACGGATGTAGACTGATTCCTGGTTCTGCCTCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: PLREGAKLGGSAHRL*GHGCRLIPGSASSQ
Trigger: CTGGGAGGAGGCAGAACCAGGAATCAGTCTACATCCGTGACCTCAGAGCCTATGCGCTGAACCCCCGAGCTTGGCCCCCTCTCTAAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS GCA 90 bp GGGCTGTGCGGGATGTTCACGCCTCCCCAGACCACAGCAATGGTGTaGTTGATGGCCTTCACCGGGGTGTATGAGCATGCATATGTGCCG +
Preference number: 5 (lower is better)
Translates to: GLCGMFTPPQTTAMV*LMAFTGVYEHAYVP
Trigger: CGGCACATATGCATGCTCATACACCCCGGTGAAGGCCATCAAGCACACCATTGCTGTGGTCTGGGGAGGCGTGAACATCCCGCACAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS GCA 90 bp TTCGGTCACCCAGGGCCTGAATCCAGGGGGACATGCATTTACCGGTaGCTCCTCCACGGCTGTGACTTCCCCATCTGTGGCCATGACAGT +
Preference number: 5 (lower is better)
Translates to: FGHPGPESRGTCIYR*LLHGCDFPICGHDS
Trigger: ACTGTCATGGCCACAGATGGGGAAGTCACAGCCGTGGAGGAGGCACCGGTAAATGCATGTCCCCCTGGATTCAGGCCCTGGGTGACCGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295956.9
ENST00000490882.5
CDS GCA 90 bp GACATAGGCCTCTTCGGTCACCCAGGGCCTGAATCCAGGGGGACATaGATTTACCGGTGCCTCCTCCACGGCTGTGACTTCCCCATCTGT +
Preference number: 5 (lower is better)
Translates to: DIGLFGHPGPESRGT*IYRCLLHGCDFPIC
Trigger: ACAGATGGGGAAGTCACAGCCGTGGAGGAGGCACCGGTAAATGCATGTCCCCCTGGATTCAGGCCCTGGGTGACCGAAGAGGCCTATGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295956.9
ENST00000490882.5
CDS GCA 90 bp TTGTGGCTGAGGGCAAGAAGCCTGAGTCACACTGTGAGCCTGAAGTaGTGCTTCAGCCACCAGAGTCCAGCTCTCCCTCCAGGGGTGTGG +
Preference number: 5 (lower is better)
Translates to: LWLRARSLSHTVSLK*CFSHQSPALPPGVW
Trigger: CCACACCCCTGGAGGGAGAGCTGGACTCTGGTGGCTGAAGCAGCACTTCAGGCTCACAGTGTGACTCAGGCTTCTTGCCCTCAGCCACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CCA 90 bp TCAGGGCCCAAGTGCCAGCACTGCTGCCTGGAAAGTACTCCTGAGTaGCTGGGAGGACAGGGGTCCTGGTTTAGGACATCCCCAAAGTGG +
Preference number: 5 (lower is better)
Translates to: SGPKCQHCCLESTPE*LGGQGSWFRTSPKW
Trigger: CCACTTTGGGGATGTCCTAAACCAGGACCCCTGTCCTCCCAGCCACTCAGGAGTACTTTCCAGGCAGCAGTGCTGGCACTTGGGCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CCA 90 bp AACCATGTCTGCATGGCTCTGGTGCCAGGCTCATCTCTTGACCCCTaGATGGGCAGTGGAGCTGCCTCAGATCCCCTAACTGCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: NHVCMALVPGSSLDP*MGSGAASDPLTAAL
Trigger: CAGGGCTGCAGTTAGGGGATCTGAGGCAGCTCCACTGCCCATCCAGGGGTCAAGAGATGAGCCTGGCACCAGAGCCATGCAGACATGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS-3UTR CAA 90 bp CTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGATGAGGGCGTTAGGTCGGTCTGCAGGTaGCCGATGCGTTTGTTCACG +
Preference number: 5 (lower is better)
Translates to: LGRVWSVMSWDGPWDEGVRSVCR*PMRLFT
Trigger: CGTGAACAAACGCATCGGCAACCTGCAGACCGACCT...AACGCCCTCATCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTAAAGCAGTGCGGATACGGACGCCTTaGGGTTGTAGGCCTCGGCCA +
Preference number: 5 (lower is better)
Translates to: VRRPQSMGVLAMRSGKAVRIRTP*GCRPRP
Trigger: TGGCCGAGGCCTACAACCCAAAGGCGTCCGTATCCG...CACTGCTTTACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGAACGGCGGGCTCCACCTaGACCCGGGCGGGGAAGTGT +
Preference number: 5 (lower is better)
Translates to: QWLVCSTKSSGLHLVYSGTAGST*TRAGKC
Trigger: ACACTTCCCCGCCCGGGTCAAGGTGGAGCCCGCCGT...TCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCGGGCTGTCCAGGTCCTTGGGCTaGCACCCTAGATGGCTGGCA +
Preference number: 5 (lower is better)
Translates to: FRVPAYNTRGPFTSGSGLSRSLG*HPRWLA
Trigger: TGCCAGCCATCTAGGGTGCAAGCCCAAGGACCTGGA...CAGCCCGGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TCACCAGAGCGAGGGGACAGGTACTTGAGAGACATGTGGGCCTGGCTGCCACTCCCGATCAGCAGCATGTaGGAGCCAGCTTTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: SPERGDRYLRDMWAWLPLPISSM*EPALLQ
Trigger: CTGCAGCAAAGCTGGCTCCAACATGCTGCTGATCGG...GAGTGGCAGCCAGGCCCACATGTCTCTCAAGTACCTGTCCCCTCGCTCTGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS TCA 90 bp CATCGTAGGTCACGTCTACAGCATACAGCCCCTCCTCCCGAGGGATaGACTTGGCCGTGCTGTTCTCCCGGCCTGTCACAGGTGTCACTA +
Preference number: 5 (lower is better)
Translates to: HRRSRLQHTAPPPEG*TWPCCSPGLSQVSL
Trigger: TAGTGACACCTGTGACAGGCCGGGAGAACAGCACGGCCAAGTTCATCCCTCGGGAGGAGGGGCTGTATGCTGTAGACGTGACCTACGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS TCA 90 bp GCTGCTGAGGTCAGTCTCACTGATGTCGAGCAGGAAGTCAGCGGCTaGGCCCAACTTCACCTGGGAGCACCGCCTGCTGTCATCTGTGAT +
Preference number: 5 (lower is better)
Translates to: AAEVSLTDVEQEVSG*AQLHLGAPPAVICD
Trigger: ATCACAGATGACAGCAGGCGGTGCTCCCAGGTGAAGTTGGGCTCAGCCGCTGACTTCCTGCTCGACATCAGTGAGACTGACCTCAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000481470.5
ENST00000490882.5
ENST00000491408.1
ENST00000493452.5
ENST00000682297.1
ENST00000682871.1
ENST00000683925.1
ENST00000684439.1
ENST00000684506.1
ENST00000684607.1
CDS TCA 90 bp CCTTGTGTCCACGATGAAGTCAGACATCTCGAAAGTCCGGCCTTCTaGCAGGCCGCGGCCATAGACTTTGGCTCGGCGGGCGTCACCAAT +
Preference number: 5 (lower is better)
Translates to: PCVHDEVRHLESPAF*QAAAIDFGSAGVTN
Trigger: ATTGGTGACGCCCGCCGAGCCAAAGTCTATGGCCGCGGCCTGTCAGAAGGCCGGACTTTCGAGATGTCTGACTTCATCGTGGACACAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000481470.5
ENST00000490882.5
ENST00000493452.5
ENST00000682297.1
ENST00000682871.1
ENST00000683925.1
ENST00000684439.1
ENST00000684506.1
ENST00000684607.1
CDS TCA 90 bp GTGTTGATGACTTGGAGGGCTTTCCTGGGAGCACTGAGGCCGTGGTaGGGGACACACATAGATCCCCTTACAGAGGGCTCACCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: VLMTWRAFLGALRPW*GTHIDPLTEGSPWW
Trigger: CCACCAGGGTGAGCCCTCTGTAAGGGGATCTATGTGTGTCCCTCACCACGGCCTCAGTGCTCCCAGGAAAGCCCTCCAAGTCATCAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS TCA 90 bp GCATGGAGTGGGCAGGGCCCTTCAGGCCACCCATGCTGGGGGCACTaGGACTTTTTGCCAAAGGTGACGTGGTCATCCATCATGCACAGA +
Preference number: 5 (lower is better)
Translates to: AWSGQGPSGHPCWGH*DFLPKVTWSSIMHR
Trigger: TCTGTGCATGATGGATGACCACGTCACCTTTGGCAAAAAGTCTCAGTGCCCCCAGCATGGGTGGCCTGAAGGGCCCTGCCCACTCCATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000682503.1
CDS GCA 90 bp AGTGTGGCACGAGTTCGCCACCATACTTCATGGTCAACGTGTACATaGCGGCCGTCAGGGGCACGTAGGTCACCGCGTAGGTGCCATCTT +
Preference number: 5 (lower is better)
Translates to: SVARVRHHTSWSTCT*RPSGARRSPRRCHL
Trigger: AAGATGGCACCTACGCGGTGACCTACGTGCCCCTGACGGCCGGCATGTACACGTTGACCATGAAGTATGGTGGCGAACTCGTGCCACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS GCA 90 bp GGTTCAGTTAAGGCTTCAAGAAGCAGAAGAGTGGGTTACCTGTGGTaGCCCCTTCGAGTCCCGTGCCATAGGCGGACACCAGGGCAGGGT +
Preference number: 5 (lower is better)
Translates to: GSVKASRSRRVGYLW*PLRVPCHRRTPGQG
Trigger: ACCCTGCCCTGGTGTCCGCCTATGGCACGGGACTCGAAGGGGGCACCACAGGTAACCCACTCTTCTGCTTCTTGAAGCCTTAACTGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475487.1
CDS CCA 90 bp TGGCCCGTATGCTCGAACCAGATCAGGGTTGTAGCCTCCCGTGGCTaGGTGGATGAAGGCCATGTACGGGCTGTCCTTGATGTCTTCGTC +
Preference number: 5 (lower is better)
Translates to: WPVCSNQIRVVASRG*VDEGHVRAVLDVFV
Trigger: GACGAAGACATCAAGGACAGCCCGTACATGGCCTTCATCCACCCAGCCACGGGAGGCTACAACCCTGATCTGGTTCGAGCATACGGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS CCA 90 bp GACGCTAAGGAGGCCAGCTTCACCCACCTTCCCGTGCTCGAGACCTaGCCCCGATGCCACGACTTTAGAGGGGTCAAAGGGCATTTCAAT +
Preference number: 5 (lower is better)
Translates to: DAKEASFTHLPVLET*PRCHDFRGVKGHFN
Trigger: ATTGAAATGCCCTTTGACCCCTCTAAAGTCGTGGCATCGGGGCCAGGTCTCGAGCACGGGAAGGTGGGTGAAGCTGGCCTCCTTAGCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CCA 90 bp CCTTCAGTCATCAGGTCTGGCGCATGCCTGCTACAGTGCCCTCTATaGGGCATGCCTGGCATAGCATCCCCATGCAGGGCTATGCTTCTG +
Preference number: 5 (lower is better)
Translates to: PSVIRSGACLLQCPL*GMPGIASPCRAMLL
Trigger: CAGAAGCATAGCCCTGCATGGGGATGCTATGCCAGGCATGCCCCATAGAGGGCACTGTAGCAGGCATGCGCCAGACCTGATGACTGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CCA 90 bp GGCACAATCTCTGCCTCAGTCACACGGCCAGAGGGGCTGGTGACGTaGGCCGACATATCACTGCTGTTGATTTCAGGCACGTGCTCGTCA +
Preference number: 5 (lower is better)
Translates to: GTISASVTRPEGLVT*ADISLLLISGTCSS
Trigger: TGACGAGCACGTGCCTGAAATCAACAGCAGTGATATGTCGGCCCACGTCACCAGCCCCTCTGGCCGTGTGACTGAGGCAGAGATTGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466455.1
CDS CCA 90 bp GCTGGTTCAGTTAAGGCTTCAAGAAGCAGAAGAGTGGGTTACCTGTaGTGCCCCCTTCGAGTCCCGTGCCATAGGCGGACACCAGGGCAG +
Preference number: 5 (lower is better)
Translates to: AGSVKASRSRRVGYL*CPLRVPCHRRTPGQ
Trigger: CTGCCCTGGTGTCCGCCTATGGCACGGGACTCGAAGGGGGCACCACAGGTAACCCACTCTTCTGCTTCTTGAAGCCTTAACTGAACCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475487.1
CDS-3UTR CAA 90 bp CCCAACACTCGCCCCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGAGGTCGGTCTGCAGGTaGCCGATGCGTTTGTTCACG +
Preference number: 5 (lower is better)
Translates to: PNTRPRYYTCHKSGHFLRRSVCR*PMRLFT
Trigger: CGTGAACAAACGCATCGGCAACCTGCAGACCGACCT...CCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGGGCGAGTGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TCACCAGAGCGAGGGGACAGGTACTTGAGAGACATGTGGGCCTGGCTGCCACTCTGGGAAGGGTCAACTTaGACTCTGAAAGGGCTGGCG +
Preference number: 5 (lower is better)
Translates to: SPERGDRYLRDMWAWLPLWEGST*TLKGLA
Trigger: CGCCAGCCCTTTCAGAGTCAAAGTTGACCCTTCCCA...GAGTGGCAGCCAGGCCCACATGTCTCTCAAGTACCTGTCCCCTCGCTCTGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TCTGCCTGCCCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTCCAGGAAGAGGGCTGTaGAACTGCACGTTGAGCGGG +
Preference number: 5 (lower is better)
Translates to: SACPDHTTHLGSGNVPDTPGRGL*NCTLSG
Trigger: CCCGCTCAACGTGCAGTTCAACAGCCCTCTTCCTGG...AGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGGGCAGGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GTGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTCCCGAGGGATGAACTaGGCCGTGCTGTTCTCCCGG +
Preference number: 5 (lower is better)
Translates to: VVLSHQAPGCSTFCRVGFSRGMN*AVLFSR
Trigger: CCGGGAGAACAGCACGGCCAAGTTCATCCCTCGGGA...AAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TACCCCCAACACTCGCCCCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTTCGGAGCACTCGATTTaGGCCTCGCACGGACCTTCC +
Preference number: 5 (lower is better)
Translates to: YPQHSPQILHLPQEWPLPSEHSI*ASHGPS
Trigger: GGAAGGTCCGTGCGAGGCCAAAATCGAGTGCTCCGA...AGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGGGCGAGTGTTGGGGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GCCGGGATGGTCTCGTGTGGTGATTCTGCAAGAAATAATCACCAGAGCGAGGGGGAGGCCCCTGAGGGGTaGGCAATGTGGGCCTTGATG +
Preference number: 5 (lower is better)
Translates to: AGMVSCGDSARNNHQSEGEAPEG*AMWALM
Trigger: CATCAAGGCCCACATTGCCAACCCCTCAGGGGCCTC...CCCCTCGCTCTGGTGATTATTTCTTGCAGAATCACCACACGAGACCATCCCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CTGAGAAGTGTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTTCCAGGTCCTTGGGCTaGCACCCTAGATGGCTGGCA +
Preference number: 5 (lower is better)
Translates to: LRSVRRPQSMGVLAMRSGSRSLG*HPRWLA
Trigger: TGCCAGCCATCTAGGGTGCAAGCCCAAGGACCTGGA...ACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTACACTTCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TCACCAGAGCGAGGGGACAGGTACTTGAGAGACATGTGGGCCTGGCTGCCACTCGTGACCGTGCCGTCCTaGTTGTCCACAATCTCAGGT +
Preference number: 5 (lower is better)
Translates to: SPERGDRYLRDMWAWLPLVTVPS*LSTISG
Trigger: ACCTGAGATTGTGGACAACAAGGACGGCACGGTCAC...GAGTGGCAGCCAGGCCCACATGTCTCTCAAGTACCTGTCCCCTCGCTCTGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GTGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTGCTGCCCACGGTACTaGACGCTGACCGTGTGCACG +
Preference number: 5 (lower is better)
Translates to: VVLSHQAPGCSTFCRVGFCCPRY*TLTVCT
Trigger: CGTGCACACGGTCAGCGTCAAGTACCGTGGGCAGCA...AAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGAGGCAGGGTTCCCCGCTaGTCCAGGCTCCCCAACGCG +
Preference number: 5 (lower is better)
Translates to: PTFRPKTRRSFILSCLYRGRVPR*SRLPNA
Trigger: CGCGTTGGGGAGCCTGGACAAGCGGGGAACCCTGCC...TCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS TCA 90 bp TGTGCGGGATGTTCACGCCTCCCCAGACCACAGCAATGGTGTGCTTaGTGGCCTTCACCGGGGTGTATGAGCATGCATATGTGCCGTCCA +
Preference number: 5 (lower is better)
Translates to: CAGCSRLPRPQQWCA*WPSPGCMSMHMCRP
Trigger: TGGACGGCACATATGCATGCTCATACACCCCGGTGAAGGCCATCAAGCACACCATTGCTGTGGTCTGGGGAGGCGTGAACATCCCGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS TCA 90 bp CAAAGGGTGTGTATTCCACCTGGTAGGTCCCATCCGCATTGTCTGTaGCAAAGCACTCGGTGGAGGCCCCTGAGGGGTTGGCAATGTGGG +
Preference number: 5 (lower is better)
Translates to: QRVCIPPGRSHPHCL*QSTRWRPLRGWQCG
Trigger: CCCACATTGCCAACCCCTCAGGGGCCTCCACCGAGTGCTTTGTCACAGACAATGCGGATGGGACCTACCAGGTGGAATACACACCCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS GCA 90 bp AGCACTTGCAGAGCACAGCCTGAAACCCAAGCTCCCAAAAAGGTGTaGGAACAGCCAAAAGGAAATGGGAGAGGGCCCAGGCACAGCGGC +
Preference number: 5 (lower is better)
Translates to: STCRAQPETQAPKKV*EQPKGNGRGPRHSG
Trigger: GCCGCTGTGCCTGGGCCCTCTCCCATTTCCTTTTGGCTGTTCGCACACCTTTTTGGGAGCTTGGGTTTCAGGCTGTGCTCTGCAAGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS GCA 90 bp CCTGACACAGCCCGGAAGCCCTGTAATCCTCAGTCCTCCAGAAGATaGTGGTCAGCTGTGTCCACTTACCCAGAGACCCCACTTCAGAGC +
Preference number: 5 (lower is better)
Translates to: PDTARKPCNPQSSRR*WSAVSTYPETPLQS
Trigger: GCTCTGAAGTGGGGTCTCTGGGTAAGTGGACACAGCTGACCAGCATCTTCTGGAGGACTGAGGATTACAGGGCTTCCGGGCTGTGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682987.1
ENST00000683511.1
CDS GCA 90 bp AAATTGTACCCAGGGCCTGAATCCAGGGGGACATGCATTTACCGGTaGCTCCTCCACGGCTGTGACTTCCCCATCTGTGGCCTGGTCAGT +
Preference number: 5 (lower is better)
Translates to: KLYPGPESRGTCIYR*LLHGCDFPICGLVS
Trigger: ACTGACCAGGCCACAGATGGGGAAGTCACAGCCGTGGAGGAGGCACCGGTAAATGCATGTCCCCCTGGATTCAGGCCCTGGGTACAATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684439.1
CDS CCA 90 bp GCTGGCATCACCCGTCTGTGTGGCTCGGATGCGATAAGGAGAAAGTaGGATGTCGTCACCCCCGTAGGTGACTCCAATCATATAGCGCCC +
Preference number: 5 (lower is better)
Translates to: AGITRLCGSDAIRRK*DVVTPVGDSNHIAP
Trigger: GGGCGCTATATGATTGGAGTCACCTACGGGGGTGACGACATCCCACTTTCTCCTTATCGCATCCGAGCCACACAGACGGGTGATGCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000481470.5
ENST00000490882.5
ENST00000493452.5
ENST00000682297.1
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CCA 90 bp TCATTAGGAAAATTGCTCAGCGGCTCCAAAGAATCTGGAGCTCCCTaGTCTATCTCCCAGCCTCTCAAGCCGCCTCCAGCAGGGTCCCGC +
Preference number: 5 (lower is better)
Translates to: SLGKLLSGSKESGAP*SISQPLKPPPAGSR
Trigger: GCGGGACCCTGCTGGAGGCGGCTTGAGAGGCTGGGAGATAGACCAGGGAGCTCCAGATTCTTTGGAGCCGCTGAGCAATTTTCCTAATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CCA 90 bp CAACAGCCTGGACACCCTGTTCTCTCCTCTGGGCATGAGCCATTGTaGCTGAGGGCAAGAAGCCTGAGTCACACTGTGAGCCTGAAGTGC +
Preference number: 5 (lower is better)
Translates to: QQPGHPVLSSGHEPL*LRARSLSHTVSLKC
Trigger: GCACTTCAGGCTCACAGTGTGACTCAGGCTTCTTGCCCTCAGCCACAATGGCTCATGCCCAGAGGAGAGAACAGGGTGTCCAGGCTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CCA 90 bp TGGTCCCTGGAGCTGGTTCAGTTAAGGCTTCAAGAAGCAGAAGAGTaGGTTACCTGTGGTGCCCCCTTCGAGTCCCGTGCCATAGGCGGA +
Preference number: 5 (lower is better)
Translates to: WSLELVQLRLQEAEE*VTCGAPFESRAIGG
Trigger: TCCGCCTATGGCACGGGACTCGAAGGGGGCACCACAGGTAACCCACTCTTCTGCTTCTTGAAGCCTTAACTGAACCAGCTCCAGGGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475487.1
CDS CCA 90 bp GGCACAATCTCTGCCTCAGTCACACGGCCAGAGGGGCTGGTGACGTaGGCCGACATATCACTGCTGTTGATTTCTGAAAGAGGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: GTISASVTRPEGLVT*ADISLLLISERGRE
Trigger: CTCCCTCCCTCTTTCAGAAATCAACAGCAGTGATATGTCGGCCCACGTCACCAGCCCCTCTGGCCGTGTGACTGAGGCAGAGATTGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682503.1
CDS CCA 90 bp GCACAGCAGCTGATTCACCAGATCAGGGTTGTAGCCTCCCGTGGCTaGGTGGATGAAGGCCATGTACGGGCTGTCCTTGATGTCTTCGTC +
Preference number: 5 (lower is better)
Translates to: AQQLIHQIRVVASRG*VDEGHVRAVLDVFV
Trigger: GACGAAGACATCAAGGACAGCCCGTACATGGCCTTCATCCACCCAGCCACGGGAGGCTACAACCCTGATCTGGTGAATCAGCTGCTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682097.1
CDS-3UTR CAA 90 bp CTGAGAAGTGTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTAGGTCGGTCTGCAGGTaGCCGATGCGTTTGTTCACG +
Preference number: 5 (lower is better)
Translates to: LRSVRRPQSMGVLAMRSGRSVCR*PMRLFT
Trigger: CGTGAACAAACGCATCGGCAACCTGCAGACCGACCT...ACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTACACTTCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp ATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGATGTAGCCCGGTGACCTaGGGCAGATACTCCACAGAG +
Preference number: 5 (lower is better)
Translates to: MKLAGAGVECYVMGRTLGCSPVT*GRYSTE
Trigger: CTCTGTGGAGTATCTGCCCAAGGTCACCGGGCTACA...TCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAGCCAACTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TCACCAGAGCGAGGGGACAGGTACTTGAGAGACATGTGGGCCTGGCTGCCACTCGCTTTGGTGTCAACCTaGAAATCTGTGGTCTCCCGG +
Preference number: 5 (lower is better)
Translates to: SPERGDRYLRDMWAWLPLALVST*KSVVSR
Trigger: CCGGGAGACCACAGATTTCAAGGTTGACACCAAAGC...GAGTGGCAGCCAGGCCCACATGTCTCTCAAGTACCTGTCCCCTCGCTCTGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TCTGCCTGCCCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTACAGCAATGGTGTGCTaGATGGCCTTCACCGGGGTG +
Preference number: 5 (lower is better)
Translates to: SACPDHTTHLGSGNVPDTTAMVC*MAFTGV
Trigger: CACCCCGGTGAAGGCCATCAAGCACACCATTGCTGT...AGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGGGCAGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCGGGCTGACCAGAACCTGCATGTaGCCCTGTTGGGTGGGTGTA +
Preference number: 5 (lower is better)
Translates to: FRVPAYNTRGPFTSGSGLTRTCM*PCWVGV
Trigger: TACACCCACCCAACAGGGCAACATGCAGGTTCTGGT...CAGCCCGGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGGTGAACTCGGCAGGCTaGCCCACGAGACCACCTTCG +
Preference number: 5 (lower is better)
Translates to: CLLQWLVCSTKSSGLHLVVNSAG*PTRPPS
Trigger: CGAAGGTGGTCTCGTGGGCAAGCCTGCCGAGTTCAC...CACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TGTTCCTGGTCTGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTGAGGCCCCTGAGGGGTaGGCAATGTGGGCCTTGATG +
Preference number: 5 (lower is better)
Translates to: CSWSVCCSGWSVPPRVLVEAPEG*AMWALM
Trigger: CATCAAGGCCCACATTGCCAACCCCTCAGGGGCCTC...AACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACAGACCAGGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TCACCAGAGCGAGGGGACAGGTACTTGAGAGACATGTGGGCCTGGCTGCCACTCATGCCAATGTGGTTGTaGGGCAGCCTCTTCAGGAGA +
Preference number: 5 (lower is better)
Translates to: SPERGDRYLRDMWAWLPLMPMWL*GSLFRR
Trigger: TCTCCTGAAGAGGCTGCCCAACAACCACATTGGCAT...GAGTGGCAGCCAGGCCCACATGTCTCTCAAGTACCTGTCCCCTCGCTCTGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGATCTTCCCTCCTGCCCGCACCTaGTGGGCGCCTCCTTCACCA +
Preference number: 5 (lower is better)
Translates to: AGLFHQEFWFAPSVLRIFPPART*WAPPSP
Trigger: TGGTGAAGGAGGCGCCCACAAGGTGCGGGCAGGAGG...GAAGATCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GTGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTCCCCAACGCGCACTTaGAAGGGGCTTCCAACCACG +
Preference number: 5 (lower is better)
Translates to: VVLSHQAPGCSTFCRVGFSPTRT*KGLPTT
Trigger: CGTGGTTGGAAGCCCCTTCAAAGTGCGCGTTGGGGA...AAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS TCA 90 bp TGGTATCTAATCTGTGCAGCCAAGAAGCCCCTCAAGCAGCAGCTCTaGGGCCTGGGGCTACGTAGGGAAGAAGCGGGAGGTGAGCAACAA +
Preference number: 5 (lower is better)
Translates to: WYLICAAKKPLKQQL*GLGLRREEAGGEQQ
Trigger: TTGTTGCTCACCTCCCGCTTCTTCCCTACGTAGCCCCAGGCCTCAGAGCTGCTGCTTGAGGGGCTTCTTGGCTGCACAGATTAGATACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS TCA 90 bp GGTGAAGCTACAGGGGTTAGAGCTGCTGGGAATTCTACAAGCCAGTaGGGCCGGGATTTGGGAATGCGGCTGCCCATTGTGGTATGGGCT +
Preference number: 5 (lower is better)
Translates to: GEATGVRAAGNSTSQ*GRDLGMRLPIVVWA
Trigger: AGCCCATACCACAATGGGCAGCCGCATTCCCAAATCCCGGCCTCACTGGCTTGTAGAATTCCCAGCAGCTCTAACCCCTGTAGCTTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684439.1
CDS GCA 90 bp CTGGGAATTCTACAAGCCAGTGAGGCCGGGATTTGGGAATGCGGCTaGCCATTGTGGTATGGGCTTTGTCTAAGTGGCTCCAGACCCAGG +
Preference number: 5 (lower is better)
Translates to: LGILQASEAGIWECG*PLWYGLCLSGSRPR
Trigger: CCTGGGTCTGGAGCCACTTAGACAAAGCCCATACCACAATGGGCAGCCGCATTCCCAAATCCCGGCCTCACTGGCTTGTAGAATTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684439.1
CDS CCA 90 bp AGGGACACACATAGATCCCCTTACAGAGGGCTCACCCTGGTGGCATaGGAACCCACTGGCACTAGCTCTGAACTTCTGGCAGAGAGAACC +
Preference number: 5 (lower is better)
Translates to: RDTHRSPYRGLTLVA*EPTGTSSELLAERT
Trigger: GGTTCTCTCTGCCAGAAGTTCAGAGCTAGTGCCAGTGGGTTCCCATGCCACCAGGGTGAGCCCTCTGTAAGGGGATCTATGTGTGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CCA 90 bp GACACAGCCCGGAAGCCCTGTAATCCTCAGTCCTCCAGAAGATGCTaGTCAGCTGTGTCCACTTACCCAGAGACCCCACTTCAGAGCCAA +
Preference number: 5 (lower is better)
Translates to: DTARKPCNPQSSRRC*SAVSTYPETPLQSQ
Trigger: TTGGCTCTGAAGTGGGGTCTCTGGGTAAGTGGACACAGCTGACCAGCATCTTCTGGAGGACTGAGGATTACAGGGCTTCCGGGCTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682987.1
ENST00000683511.1
CDS CCA 90 bp CTACAAGCCAGTGAGGCCGGGATTTGGGAATGCGGCTGCCCATTGTaGTATGGGCTTTGTCTAAGTGGCTCCAGACCCAGGGTAGAACCT +
Preference number: 5 (lower is better)
Translates to: LQASEAGIWECGCPL*YGLCLSGSRPRVEP
Trigger: AGGTTCTACCCTGGGTCTGGAGCCACTTAGACAAAGCCCATACCACAATGGGCAGCCGCATTCCCAAATCCCGGCCTCACTGGCTTGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684439.1
CDS-3UTR CAA 90 bp GCCGGGATGGTCTCGTGTGGTGATTCTGCAAGAAATAATCACCAGAGCGAGGGGTGTAGCCCGGTGACCTaGGGCAGATACTCCACAGAG +
Preference number: 5 (lower is better)
Translates to: AGMVSCGDSARNNHQSEGCSPVT*GRYSTE
Trigger: CTCTGTGGAGTATCTGCCCAAGGTCACCGGGCTACA...CCCCTCGCTCTGGTGATTATTTCTTGCAGAATCACCACACGAGACCATCCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GGAAACTGCTCGCCACTGCAGAATTTCTTCAGACCAAGGAAGGGACTGAAACGGCGGATACGGACGCCTTaGGGTTGTAGGCCTCGGCCA +
Preference number: 5 (lower is better)
Translates to: GNCSPLQNFFRPRKGLKRRIRTP*GCRPRP
Trigger: TGGCCGAGGCCTACAACCCAAAGGCGTCCGTATCCG...CCGTTTCAGTCCCTTCCTTGGTCTGAAGAAATTCTGCAGTGGCGAGCAGTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TGGGACGGACCTTGGGATGAGGGCGTTAATCCATGGGCCCCTCTGAGATCACTTCTGAGGATGGCTACCTaGCCCGATGTTGACCCTGTA +
Preference number: 5 (lower is better)
Translates to: WDGPWDEGVNPWAPLRSLLRMAT*PDVDPV
Trigger: TACAGGGTCAACATCGGGCAAGGTAGCCATCCTCAG...AAGTGATCTCAGAGGGGCCCATGGATTAACGCCCTCATCCCAAGGTCCGTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TCTGCCTGCCCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTCTGAGGATGGCTACCTaGCCCGATGTTGACCCTGTA +
Preference number: 5 (lower is better)
Translates to: SACPDHTTHLGSGNVPDTLRMAT*PDVDPV
Trigger: TACAGGGTCAACATCGGGCAAGGTAGCCATCCTCAG...AGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGGGCAGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGACCGTGGGCCTTCACCTaGCTGGGATCTGGTGGCAGC +
Preference number: 5 (lower is better)
Translates to: PTFRPKTRRSFILSCLYRPWAFT*LGSGGS
Trigger: GCTGCCACCAGATCCCAGCAAGGTGAAGGCCCACGG...TCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCAGTGAACTCGGCAGGCTaGCCCACGAGACCACCTTCG +
Preference number: 5 (lower is better)
Translates to: PDHTTHLGSGNVPDTLTSVNSAG*PTRPPS
Trigger: CGAAGGTGGTCTCGTGGGCAAGCCTGCCGAGTTCAC...TGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GCCGGGATGGTCTCGTGTGGTGATTCTGCAAGAAATAATCACCAGAGCGAGGGGTTGGCAATGTGGGCCTaGATGTGGTCACCCCCAACC +
Preference number: 5 (lower is better)
Translates to: AGMVSCGDSARNNHQSEGLAMWA*MWSPPT
Trigger: GGTTGGGGGTGACCACATCAAGGCCCACATTGCCAA...CCCCTCGCTCTGGTGATTATTTCTTGCAGAATCACCACACGAGACCATCCCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTTCCAGGTCCTTGGGCTaGCACCCTAGATGGCTGGCA +
Preference number: 5 (lower is better)
Translates to: WSFHIRLRAVPLSVGWAFSRSLG*HPRWLA
Trigger: TGCCAGCCATCTAGGGTGCAAGCCCAAGGACCTGGA...AAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GTGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTCCGGCAATCTTGACCTaGCTGGGGTCCACAACATCC +
Preference number: 5 (lower is better)
Translates to: VVLSHQAPGCSTFCRVGFPAILT*LGSTTS
Trigger: GGATGTTGTGGACCCCAGCAAGGTCAAGATTGCCGG...AAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TCCCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACACCGGGGCCGGCAATCTaGACCTTGCTGGGGTCCACA +
Preference number: 5 (lower is better)
Translates to: SQLSGQRPAGVSFCPVCTPGPAI*TLLGST
Trigger: TGTGGACCCCAGCAAGGTCAAGATTGCCGGCCCCGG...TGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GTGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTCCCTTCCCGGCAGTCTaGGCATCAACCACAAAGCCT +
Preference number: 5 (lower is better)
Translates to: VVLSHQAPGCSTFCRVGFPFPAV*ASTTKP
Trigger: AGGCTTTGTGGTTGATGCCAAGACTGCCGGGAAGGG...AAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GCCGGGATGGTCTCGTGTGGTGATTCTGCAAGAAATAATCACCAGAGCGAGGGGCCCTTCCCGGCAGTCTaGGCATCAACCACAAAGCCT +
Preference number: 5 (lower is better)
Translates to: AGMVSCGDSARNNHQSEGPFPAV*ASTTKP
Trigger: AGGCTTTGTGGTTGATGCCAAGACTGCCGGGAAGGG...CCCCTCGCTCTGGTGATTATTTCTTGCAGAATCACCACACGAGACCATCCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp ATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGAACCGTGCCGTCCTTGTaGTCCACAATCTCAGGTGTG +
Preference number: 5 (lower is better)
Translates to: MKLAGAGVECYVMGRTLGTVPSL*STISGV
Trigger: CACACCTGAGATTGTGGACAACAAGGACGGCACGGT...TCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAGCCAACTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TCTGCCTGCCCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTGTGACCGTGCCGTCCTaGTTGTCCACAATCTCAGGT +
Preference number: 5 (lower is better)
Translates to: SACPDHTTHLGSGNVPDTVTVPS*LSTISG
Trigger: ACCTGAGATTGTGGACAACAAGGACGGCACGGTCAC...AGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGGGCAGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CACTTTAACCTCATTCCAAAGCCAGCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCTCCTGCCCGCACCTaGTGGGCGCCTCCTTCACCA +
Preference number: 5 (lower is better)
Translates to: HFNLIPKPAQVCRKAGKIPPART*WAPPSP
Trigger: TGGTGAAGGAGGCGCCCACAAGGTGCGGGCAGGAGG...AATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGGAATGAGGTTAAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTTCCCCAACGCGCACTTaGAAGGGGCTTCCAACCACG +
Preference number: 5 (lower is better)
Translates to: WSFHIRLRAVPLSVGWAFSPTRT*KGLPTT
Trigger: CGTGGTTGGAAGCCCCTTCAAAGTGCGCGTTGGGGA...AAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TTGTCATGCCAACGACTGTGCCTGCACTGCCGTGGTGAGGCCAGGCGGCCGCATGACATATCACTGCTGTaGATTTGTCATGCCAACGAC +
Preference number: 5 (lower is better)
Translates to: LSCQRLCLHCRGEARRPHDISLL*ICHAND
Trigger: GTCGTTGGCATGACAAATCAACAGCAGTGATATGTC...ATGCGGCCGCCTGGCCTCACCACGGCAGTGCAGGCACAGTCGTTGGCATGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470231.1
CDS TCA 90 bp CTTCAGGCCACCCATGCTGGGGGCACTGAGACTTTTTGCCAAAGGTaGCGTGGTCATCCATCATGCACAGACGGGCTCCTTTCCACAGAT +
Preference number: 5 (lower is better)
Translates to: LQATHAGGTETFCQR*RGHPSCTDGLLSTD
Trigger: ATCTGTGGAAAGGAGCCCGTCTGTGCATGATGGATGACCACGTCACCTTTGGCAAAAAGTCTCAGTGCCCCCAGCATGGGTGGCCTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000682503.1
CDS GCA 90 bp GCTTCCCTGCAAGAGCAACTCCTTCTCTCAGCAGCGTCCAGCACTTaGAGAGCACAGCCTGAAACCCAAGCTCCCAAAAAGGTGTGCGAA +
Preference number: 5 (lower is better)
Translates to: ASLQEQLLLSAASST*RAQPETQAPKKVCE
Trigger: TTCGCACACCTTTTTGGGAGCTTGGGTTTCAGGCTGTGCTCTGCAAGTGCTGGACGCTGCTGAGAGAAGGAGTTGCTCTTGCAGGGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS GCA 90 bp GAGCTGCTGGGAATTCTACAAGCCAGTGAGGCCGGGATTTGGGAATaGGGCTGCCCATTGTGGTATGGGCTTTGTCTAAGTGGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: ELLGILQASEAGIWE*GCPLWYGLCLSGSR
Trigger: TCTGGAGCCACTTAGACAAAGCCCATACCACAATGGGCAGCCGCATTCCCAAATCCCGGCCTCACTGGCTTGTAGAATTCCCAGCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684439.1
CDS CCA 90 bp TGGTTTCCTTTGTCTTCCACGAGCAACTCCACGGTGTTCTTCCCCTaGGGATCTTCCACCTCCACACCAATGTCACCCACACCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: WFPLSSTSNSTVFFP*GSSTSTPMSPTPAP
Trigger: AGGAGCTGGTGTGGGTGACATTGGTGTGGAGGTGGAAGATCCCCAGGGGAAGAACACCGTGGAGTTGCTCGTGGAAGACAAAGGAAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682097.1
ENST00000682868.1
ENST00000682871.1
ENST00000682987.1
ENST00000683511.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS CCA 90 bp GGTAAAGGCCTCTTTCAATCCAGGTCCTTGGGCTTGCACCCTAGATaGCTGGCAGCCTTCAGTGACAGCCACCTTGAAGGGACTGTTTGG +
Preference number: 5 (lower is better)
Translates to: GKGLFQSRSLGLHPR*LAAFSDSHLEGTVW
Trigger: CCAAACAGTCCCTTCAAGGTGGCTGTCACTGAAGGCTGCCAGCCATCTAGGGTGCAAGCCCAAGGACCTGGATTGAAAGAGGCCTTTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CCA 90 bp TCCATCTTCATTCTCAATGACATCGGCCTCGGCCTCAGTGCCATCTaGGGTCAGAACCGTGCAGGTCACTTTACCCTTCCCGGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: SIFILNDIGLGLSAI*GQNRAGHFTLPGSL
Trigger: AAGACTGCCGGGAAGGGTAAAGTGACCTGCACGGTTCTGACCCCAGATGGCACTGAGGCCGAGGCCGATGTCATTGAGAATGAAGATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000481470.5
ENST00000490882.5
ENST00000493452.5
ENST00000682297.1
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CCA 90 bp CTCCATACACGAGGCCTGGACCGTATGCAGAAACACTTCCACTGTTaGGGTAGTTCACGTAGAACTGGAGTGGGCTCTCAGGGATGTGGC +
Preference number: 5 (lower is better)
Translates to: LHTRGLDRMQKHFHC*GSSRRTGVGSQGCG
Trigger: GCCACATCCCTGAGAGCCCACTCCAGTTCTACGTGAACTACCCCAACAGTGGAAGTGTTTCTGCATACGGTCCAGGCCTCGTGTATGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000481470.5
ENST00000490882.5
ENST00000493452.5
ENST00000682297.1
ENST00000684439.1
ENST00000684506.1
ENST00000684607.1
CDS CCA 90 bp ATTTACACAGGGTTTGAAGCAGGCGGTTCTGTACCTCTCCCCTCCTaGCTAGGAGCTTCCCTGCAAGAGCAACTCCTTCTCTCAGCAGCG +
Preference number: 5 (lower is better)
Translates to: IYTGFEAGGSVPLPS*LGASLQEQLLLSAA
Trigger: CGCTGCTGAGAGAAGGAGTTGCTCTTGCAGGGAAGCTCCTAGCCAGGAGGGGAGAGGTACAGAACCGCCTGCTTCAAACCCTGTGTAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CCA 90 bp AGAGGCAACTGCAAATGTACAGCAGCACGCAGAGATGGCTTAGGGTaGCCAGGAGGCCAGGAAGCTAAAGGTATTGAGGCTAGGCAAGGC +
Preference number: 5 (lower is better)
Translates to: RGNCKCTAARRDGLG*PGGQEAKGIEARQG
Trigger: GCCTTGCCTAGCCTCAATACCTTTAGCTTCCTGGCCTCCTGGCCACCCTAAGCCATCTCTGCGTGCTGCTGTACATTTGCAGTTGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682987.1
ENST00000683511.1
CDS CCA 90 bp GGGTTAGAGCTGCTGGGAATTCTACAAGCCAGTGAGGCCGGGATTTaGGAATGCGGCTGCCCATTGTGGTATGGGCTTTGTCTAAGTGGC +
Preference number: 5 (lower is better)
Translates to: GLELLGILQASEAGI*ECGCPLWYGLCLSG
Trigger: GCCACTTAGACAAAGCCCATACCACAATGGGCAGCCGCATTCCCAAATCCCGGCCTCACTGGCTTGTAGAATTCCCAGCAGCTCTAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684439.1
CDS CCA 90 bp AGACCCTGGACAACTGGCATCTTGACGTCCACCTCTCTACAGGTCTaGCGCCTCCTAAGCAGAGGCATGAAGAGACAGAAGGAGATGCAC +
Preference number: 5 (lower is better)
Translates to: RPWTTGILTSTSLQV*RLLSRGMKRQKEMH
Trigger: GTGCATCTCCTTCTGTCTCTTCATGCCTCTGCTTAGGAGGCGCCAGACCTGTAGAGAGGTGGACGTCAAGATGCCAGTTGTCCAGGGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683925.1
CDS-3UTR CAA 90 bp CTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGATGAGGGCGTTTCCACAGAGTATGTCTaGTTCTTGTCACTGTCAGGG +
Preference number: 5 (lower is better)
Translates to: LGRVWSVMSWDGPWDEGVSTEYV*FLSLSG
Trigger: CCCTGACAGTGACAAGAACAAGACATACTCTGTGGA...AACGCCCTCATCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp ATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGAAAGAGGACTGTGACTTaGTGTAGCCCGGTGACCTTG +
Preference number: 5 (lower is better)
Translates to: MKLAGAGVECYVMGRTLGKRTVT*CSPVTL
Trigger: CAAGGTCACCGGGCTACACAAAGTCACAGTCCTCTT...TCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAGCCAACTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TCTGCCTGCCCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTCCAGGCTGCATGGGTTaGTACACACATCGATACACC +
Preference number: 5 (lower is better)
Translates to: SACPDHTTHLGSGNVPDTPGCMG*YTHRYT
Trigger: GGTGTATCGATGTGTGTACAAACCCATGCAGCCTGG...AGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGGGCAGGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAAACCTACGGATACGGACGCCTTaGGGTTGTAGGCCTCGGCCA +
Preference number: 5 (lower is better)
Translates to: YYTCHKSGHFLRTKQQNLRIRTP*GCRPRP
Trigger: TGGCCGAGGCCTACAACCCAAAGGCGTCCGTATCCG...TAGGTTTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTAAAGCAGTGGCTTTGGTGTCAACCTaGAAATCTGTGGTCTCCCGG +
Preference number: 5 (lower is better)
Translates to: VRRPQSMGVLAMRSGKAVALVST*KSVVSR
Trigger: CCGGGAGACCACAGATTTCAAGGTTGACACCAAAGC...CACTGCTTTACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TTTGGCTTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCACCAGAACCTGCATGTaGCCCTGTTGGGTGGGTGTA +
Preference number: 5 (lower is better)
Translates to: FGFRVPAYNTRGPFTSGSTRTCM*PCWVGV
Trigger: TACACCCACCCAACAGGGCAACATGCAGGTTCTGGT...GGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAAGCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGATGAGGGCGTTCCATTGAGTTTTATCTaGCTCAGATCCAGCGGTGCA +
Preference number: 5 (lower is better)
Translates to: LGRVWSVMSWDGPWDEGVPLSFI*LRSSGA
Trigger: TGCACCGCTGGATCTGAGCAAGATAAAACTCAATGG...AACGCCCTCATCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACCGTGGGCCTTCACCTaGCTGGGATCTGGTGGCAGC +
Preference number: 5 (lower is better)
Translates to: SAGRQAKFPTPHFWISAPPWAFT*LGSGGS
Trigger: GCTGCCACCAGATCCCAGCAAGGTGAAGGCCCACGG...TGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAATCGGAGCACTCGATTTaGGCCTCGCACGGACCTTCC +
Preference number: 5 (lower is better)
Translates to: PDTTPATRVATSSGLSSKSEHSI*ASHGPS
Trigger: GGAAGGTCCGTGCGAGGCCAAAATCGAGTGCTCCGA...TTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TCACCAGAGCGAGGGGACAGGTACTTGAGAGACATGTGGGCCTGGCTGCCACTCGTGAAGACATTGGGCTaGTTGGTAAAGGCCTCTTTC +
Preference number: 5 (lower is better)
Translates to: SPERGDRYLRDMWAWLPLVKTLG*LVKASF
Trigger: GAAAGAGGCCTTTACCAACAAGCCCAATGTCTTCAC...GAGTGGCAGCCAGGCCCACATGTCTCTCAAGTACCTGTCCCCTCGCTCTGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TGGGACGGACCTTGGGATGAGGGCGTTAATCCATGGGCCCCTCTGAGATCACTTACCACGGTGAAGACATaGGGCTTGTTGGTAAAGGCC +
Preference number: 5 (lower is better)
Translates to: WDGPWDEGVNPWAPLRSLTTVKT*GLLVKA
Trigger: GGCCTTTACCAACAAGCCCAATGTCTTCACCGTGGT...AAGTGATCTCAGAGGGGCCCATGGATTAACGCCCTCATCCCAAGGTCCGTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACACAGCTCCGGGGCCGGCAATCTaGACCTTGCTGGGGTCCACA +
Preference number: 5 (lower is better)
Translates to: EGRQNSLHLISGFLHHTAPGPAI*TLLGST
Trigger: TGTGGACCCCAGCAAGGTCAAGATTGCCGGCCCCGG...AGCTGTGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GTGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTACCGTGCCGTCCTTGTaGTCCACAATCTCAGGTGTG +
Preference number: 5 (lower is better)
Translates to: VVLSHQAPGCSTFCRVGFTVPSL*STISGV
Trigger: CACACCTGAGATTGTGGACAACAAGGACGGCACGGT...AAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GTGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTGTGACCGTGCCGTCCTaGTTGTCCACAATCTCAGGT +
Preference number: 5 (lower is better)
Translates to: VVLSHQAPGCSTFCRVGFVTVPS*LSTISG
Trigger: ACCTGAGATTGTGGACAACAAGGACGGCACGGTCAC...AAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGATCTTCGTCTGGATGTCCACTTaGCTGGGGCCTTCCACCGCC +
Preference number: 5 (lower is better)
Translates to: AGLFHQEFWFAPSVLRIFVWMST*LGPSTA
Trigger: GGCGGTGGAAGGCCCCAGCAAAGTGGACATCCAGAC...GAAGATCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATGCTGCCCACGGTACTaGACGCTGACCGTGTGCACG +
Preference number: 5 (lower is better)
Translates to: PTFRPKTRRSFILSCLYRCCPRY*TLTVCT
Trigger: CGTGCACACGGTCAGCGTCAAGTACCGTGGGCAGCA...TCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGATGAGGGCGTTCAATCCATTTTAACCTaGGATGGGCCTTCGATGGTG +
Preference number: 5 (lower is better)
Translates to: LGRVWSVMSWDGPWDEGVQSILT*DGPSMV
Trigger: CACCATCGAAGGCCCATCCAAGGTTAAAATGGATTG...AACGCCCTCATCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTACCCCGACCACACTACACATTaGGGCTCAGGCAACGTCCCT +
Preference number: 5 (lower is better)
Translates to: LSHQAPGCSTFCRVGFYPDHTTH*GSGNVP
Trigger: AGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTC...GGGGTAAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS TCA 90 bp CCAGACCACAGCAATGGTGTGCTTGATGGCCTTCACCGGGGTGTATaGGCATGCATATGTGCCGTCCATCCGGTTCTTCATCTGGATGTC +
Preference number: 5 (lower is better)
Translates to: PDHSNGVLDGLHRGV*ACICAVHPVLHLDV
Trigger: GACATCCAGATGAAGAACCGGATGGACGGCACATATGCATGCTCATACACCCCGGTGAAGGCCATCAAGCACACCATTGCTGTGGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS TCA 90 bp GCACGTAGGTCACCGCGTAGGTGCCATCTTTGTTGTTCTGAATACTaGCTTCGGCTTTTGTTCCCGAGTCCGAGACAGCTTCCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: ARRSPRRCHLCCSEY*LRLLFPSPRQLPGP
Trigger: TGGGCCTGGAAGCTGTCTCGGACTCGGGAACAAAAGCCGAAGTCAGTATTCAGAACAACAAAGATGGCACCTACGCGGTGACCTACGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS TCA 90 bp ACAAGCAGAAGTCTCTCACCACTGCCTCTAGCTATAACCTGTATCTaGCACCACAAAACATCTCTGGGCGTGGCGGTCTTCCCCCACCCC +
Preference number: 5 (lower is better)
Translates to: TSRSLSPLPLAITCI*HHKTSLGVAVFPHP
Trigger: GGGGTGGGGGAAGACCGCCACGCCCAGAGATGTTTTGTGGTGTCAGATACAGGTTATAGCTAGAGGCAGTGGTGAGAGACTTCTGCTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS TCA 90 bp TATCGTGCAACTCTCAAACACAACCCAGCTGTTCCTGGAAGCTCTTaGGGCTCCTGCCCCAAGGTCCACCCCCAACACTATCTCAACCTC +
Preference number: 5 (lower is better)
Translates to: YRATLKHNPAVPGSS*GSCPKVHPQHYLNL
Trigger: GAGGTTGAGATAGTGTTGGGGGTGGACCTTGGGGCAGGAGCCTCAAGAGCTTCCAGGAACAGCTGGGTTGTGTTTGAGAGTTGCACGATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS GCA 90 bp CCCTGGGCCTTGTCAACACTCACTTCAAATGGGCTCTTGGAGATGTaGTGTCCTGCAAAGAGGACTGTGACTTTGTGTAGCCCGGTGACC +
Preference number: 5 (lower is better)
Translates to: PWALSTLTSNGLLEM*CPAKRTVTLCSPVT
Trigger: GGTCACCGGGCTACACAAAGTCACAGTCCTCTTTGCAGGACAGCACATCTCCAAGAGCCCATTTGAAGTGAGTGTTGACAAGGCCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682097.1
ENST00000682868.1
ENST00000682871.1
ENST00000682987.1
ENST00000683511.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS GCA 90 bp TTGGGCTTGTTGGTAAAGGCCTCTTTCAATCCAGGTCCTTGGGCTTaGACCCTAGATGGCTGGCAGCCTTCAGTGACAGCCACCTTGAAG +
Preference number: 5 (lower is better)
Translates to: LGLLVKASFNPGPWA*TLDGWQPSVTATLK
Trigger: CTTCAAGGTGGCTGTCACTGAAGGCTGCCAGCCATCTAGGGTGCAAGCCCAAGGACCTGGATTGAAAGAGGCCTTTACCAACAAGCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS GCA 90 bp ACAGCACCATTTACGCATGTGGTATGGAATCCTTTCCGTGATTCCTaGTTCACAAATGACTCTGCGGCTCAGGGAGGGGGCCAGTCACGC +
Preference number: 5 (lower is better)
Translates to: TAPFTHVVWNPFRDS*FTNDSAAQGGGQSR
Trigger: GCGTGACTGGCCCCCTCCCTGAGCCGCAGAGTCATTTGTGAAGCAGGAATCACGGAAAGGATTCCATACCACATGCGTAAATGGTGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS GCA 90 bp TACAAACTGCTGGGGAGGACCTTCTGCCCTCACGCCTCCAAGTACTaGACGTACCACCTTGGGGGTTTATCCACAGCCAGATCTGAGATT +
Preference number: 5 (lower is better)
Translates to: YKLLGRTFCPHASKY*TYHLGGLSTARSEI
Trigger: AATCTCAGATCTGGCTGTGGATAAACCCCCAAGGTGGTACGTGCAGTACTTGGAGGCGTGAGGGCAGAAGGTCCTCCCCAGCAGTTTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000477629.1
ENST00000683114.1
CDS GCA 90 bp ATGAAAAGGTCAGCACAGCCGACTTGGATACTGTGTTCTGGGCCATaGCTAAACTTGGTTCCCAAAGGCACCCACTGCCCTGAAGGCTGG +
Preference number: 5 (lower is better)
Translates to: MKRSAQPTWILCSGP*LNLVPKGTHCPEGW
Trigger: CCAGCCTTCAGGGCAGTGGGTGCCTTTGGGAACCAAGTTTAGGCATGGCCCAGAACACAGTATCCAAGTCGGCTGTGCTGACCTTTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477629.1
ENST00000683925.1
CDS GCA 90 bp GGCAAAGGCAGCTCTGTGAGCGACATTTGGAACAGCCCTATCCTCTaGCTGCACAGGTTGGAGCTATGCAGGGACATATCAGTCAGAAGG +
Preference number: 5 (lower is better)
Translates to: GKGSSVSDIWNSPIL*LHRLELCRDISVRR
Trigger: CCTTCTGACTGATATGTCCCTGCATAGCTCCAACCTGTGCAGGCAGAGGATAGGGCTGTTCCAAATGTCGCTCACAGAGCTGCCTTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS CCA 90 bp AAGACATTGGGCTTGTTGGTAAAGGCCTCTTTCAATCCAGGTCCTTaGGCTTGCACCCTAGATGGCTGGCAGCCTTCAGTGACAGCCACC +
Preference number: 5 (lower is better)
Translates to: KTLGLLVKASFNPGP*ACTLDGWQPSVTAT
Trigger: GGTGGCTGTCACTGAAGGCTGCCAGCCATCTAGGGTGCAAGCCCAAGGACCTGGATTGAAAGAGGCCTTTACCAACAAGCCCAATGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CCA 90 bp CTGGACCATTTCATTAGGAAAATTGCTCAGCGGCTCCAAAGAATCTaGAGCTCCCTGGTCTATCTCCCAGCCTCTCAAGCCGCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: LDHFIRKIAQRLQRI*SSLVYLPASQAASS
Trigger: GCTGGAGGCGGCTTGAGAGGCTGGGAGATAGACCAGGGAGCTCCAGATTCTTTGGAGCCGCTGAGCAATTTTCCTAATGAAATGGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS-3UTR CAA 90 bp TCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACACCATCACGTCTCCTaGCCCGGCGCTGATGGTGTC +
Preference number: 5 (lower is better)
Translates to: SAGRQAKFPTPHFWISAPHHHVS*PGADGV
Trigger: GACACCATCAGCGCCGGGCAAGGAGACGTGATGGTG...TGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GTGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTAAGAGGACTGTGACTTaGTGTAGCCCGGTGACCTTG +
Preference number: 5 (lower is better)
Translates to: VVLSHQAPGCSTFCRVGFKRTVT*CSPVTL
Trigger: CAAGGTCACCGGGCTACACAAAGTCACAGTCCTCTT...AAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TCTGCCTGCCCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTACTTCAAATGGGCTCTaGGAGATGTGCTGTCCTGCA +
Preference number: 5 (lower is better)
Translates to: SACPDHTTHLGSGNVPDTTSNGL*EMCCPA
Trigger: TGCAGGACAGCACATCTCCAAGAGCCCATTTGAAGT...AGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGGGCAGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CTGAGAAGTGTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTTACACCTGGTTTCCTTaGTCTTCCACGAGCAACTCC +
Preference number: 5 (lower is better)
Translates to: LRSVRRPQSMGVLAMRSGYTWFP*SSTSNS
Trigger: GGAGTTGCTCGTGGAAGACAAAGGAAACCAGGTGTA...ACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTACACTTCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TCCCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACACGGCAGGCATTTGGATaGCAGGCTTCCCCAACCTGC +
Preference number: 5 (lower is better)
Translates to: SQLSGQRPAGVSFCPVCTRQAFG*QASPTC
Trigger: GCAGGTTGGGGAAGCCTGCAATCCAAATGCCTGCCG...TGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp ATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGACGTTGTACTCAATCTTaGCCTGAGAGGGGCCTTCAA +
Preference number: 5 (lower is better)
Translates to: MKLAGAGVECYVMGRTLGRCTQS*PERGLQ
Trigger: TTGAAGGCCCCTCTCAGGCAAAGATTGAGTACAACG...TCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAGCCAACTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TCTGCCTGCCCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTCGTTGTACTCAATCTTaGCCTGAGAGGGGCCTTCAA +
Preference number: 5 (lower is better)
Translates to: SACPDHTTHLGSGNVPDTRCTQS*PERGLQ
Trigger: TTGAAGGCCCCTCTCAGGCAAAGATTGAGTACAACG...AGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGGGCAGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTACCCCATGTACGGGCTGTCCTaGATGTCTTCGTCGTCACAC +
Preference number: 5 (lower is better)
Translates to: LSHQAPGCSTFCRVGFYPMYGLS*MSSSSH
Trigger: GTGTGACGACGAAGACATCAAGGACAGCCCGTACAT...GGGGTAAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CTGAGAAGTGTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTGTGAACTCGGCCAGGTaGTTGACAATGCATCCAGAT +
Preference number: 5 (lower is better)
Translates to: LRSVRRPQSMGVLAMRSGVNSAR*LTMHPD
Trigger: ATCTGGATGCATTGTCAACAACCTGGCCGAGTTCAC...ACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTACACTTCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTGGGAAGGGTCAACTTaGACTCTGAAAGGGCTGGCG +
Preference number: 5 (lower is better)
Translates to: CLLQWLVCSTKSSGLHLVWEGST*TLKGLA
Trigger: CGCCAGCCCTTTCAGAGTCAAAGTTGACCCTTCCCA...CACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCTGGAGCGTGTGCTGTTGAACTGCACGTaGAGCGGGGCTTTCCCAGCC +
Preference number: 5 (lower is better)
Translates to: HFKHFGKTAQADEGLERVLLNCT*SGAFPA
Trigger: GGCTGGGAAAGCCCCGCTCAACGTGCAGTTCAACAG...CACACGCTCCAGCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAAACCTACTGTTGAACTGCACGTaGAGCGGGGCTTTCCCAGCC +
Preference number: 5 (lower is better)
Translates to: YYTCHKSGHFLRTKQQNLLLNCT*SGAFPA
Trigger: GGCTGGGAAAGCCCCGCTCAACGTGCAGTTCAACAG...TAGGTTTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGACCAGAACCTGCATGTaGCCCTGTTGGGTGGGTGTA +
Preference number: 5 (lower is better)
Translates to: CLLQWLVCSTKSSGLHLVTRTCM*PCWVGV
Trigger: TACACCCACCCAACAGGGCAACATGCAGGTTCTGGT...CACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CCCAACACTCGCCCCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGCCATTGAGTTTTATCTaGCTCAGATCCAGCGGTGCA +
Preference number: 5 (lower is better)
Translates to: PNTRPRYYTCHKSGHFLRPLSFI*LRSSGA
Trigger: TGCACCGCTGGATCTGAGCAAGATAAAACTCAATGG...CCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGGGCGAGTGTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCATCCCGAGGGATGAACTaGGCCGTGCTGTTCTCCCGG +
Preference number: 5 (lower is better)
Translates to: SAGRQAKFPTPHFWISAPSRGMN*AVLFSR
Trigger: CCGGGAGAACAGCACGGCCAAGTTCATCCCTCGGGA...TGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CACTTTAACCTCATTCCAAAGCCAGCTCAGGTCTGCAGGAAGGCAGGCAAAATTTCCCGAGGGATGAACTaGGCCGTGCTGTTCTCCCGG +
Preference number: 5 (lower is better)
Translates to: HFNLIPKPAQVCRKAGKISRGMN*AVLFSR
Trigger: CCGGGAGAACAGCACGGCCAAGTTCATCCCTCGGGA...AATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGGAATGAGGTTAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp AGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCAGTGAACTCGGCAGGCTaGCCCACGAGACCACCTTCG +
Preference number: 5 (lower is better)
Translates to: RSAGRQAKFPTPHFWISAVNSAG*PTRPPS
Trigger: CGAAGGTGGTCTCGTGGGCAAGCCTGCCGAGTTCAC...TGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGATCTTCTCGGAGCACTCGATTTaGGCCTCGCACGGACCTTCC +
Preference number: 5 (lower is better)
Translates to: AGLFHQEFWFAPSVLRIFSEHSI*ASHGPS
Trigger: GGAAGGTCCGTGCGAGGCCAAAATCGAGTGCTCCGA...GAAGATCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GTGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTCAGGTCCCATCACCATaGTCGGAGCACTCGATTTTG +
Preference number: 5 (lower is better)
Translates to: VVLSHQAPGCSTFCRVGFQVPSP*SEHSIL
Trigger: CAAAATCGAGTGCTCCGACAATGGTGATGGGACCTG...AAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TGGGACGGACCTTGGGATGAGGGCGTTAATCCATGGGCCCCTCTGAGATCACTTTCTTCAAAGAGGATGTaGACGAAGTACTCCCCGGGT +
Preference number: 5 (lower is better)
Translates to: WDGPWDEGVNPWAPLRSLSSKRM*TKYSPG
Trigger: ACCCGGGGAGTACTTCGTCAACATCCTCTTTGAAGA...AAGTGATCTCAGAGGGGCCCATGGATTAACGCCCTCATCCCAAGGTCCGTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAACCGGCAATCTTGACCTaGCTGGGGTCCACAACATCC +
Preference number: 5 (lower is better)
Translates to: PDTTPATRVATSSGLSSKPAILT*LGSTTS
Trigger: GGATGTTGTGGACCCCAGCAAGGTCAAGATTGCCGG...TTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TTTGGCTTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCTATGTGGGAAGGACCTaGACCTTGAAGGGACTGCGA +
Preference number: 5 (lower is better)
Translates to: FGFRVPAYNTRGPFTSGSYVGRT*TLKGLR
Trigger: TCGCAGTCCCTTCAAGGTCAAGGTCCTTCCCACATA...GGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAAGCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTAAAGCAGTGCATCTCGGGCATCAATaGCAAAGTCCACAGGTAGAC +
Preference number: 5 (lower is better)
Translates to: VRRPQSMGVLAMRSGKAVHLGHQ*QSPQVD
Trigger: GTCTACCTGTGGACTTTGCAATTGATGCCCGAGATG...CACTGCTTTACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCGGGCTGTGGACAATGGCTCTTTaGGGTTTTCCTTCTTGGTCC +
Preference number: 5 (lower is better)
Translates to: FRVPAYNTRGPFTSGSGLWTMAL*GFPSWS
Trigger: GGACCAAGAAGGAAAACCCAAAAGAGCCATTGTCCA...CAGCCCGGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CCCAACACTCGCCCCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGGGGATGTGCTTGTCATaGTACTTGACCAGAATGCTG +
Preference number: 5 (lower is better)
Translates to: PNTRPRYYTCHKSGHFLRGMCLS*YLTRML
Trigger: CAGCATTCTGGTCAAGTACAATGACAAGCACATCCC...CCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGGGCGAGTGTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TGTTCCTGGTCTGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTGAGATGCCAATGTGGTaGTTGGGCAGCCTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: CSWSVCCSGWSVPPRVLVEMPMW*LGSLFR
Trigger: CCTGAAGAGGCTGCCCAACAACCACATTGGCATCTC...AACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACAGACCAGGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TCTGCCTGCCCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTGGGGTGTACATGACTTaGTACCCTTCAGGTGTTTCC +
Preference number: 5 (lower is better)
Translates to: SACPDHTTHLGSGNVPDTGVYMT*YPSGVS
Trigger: GGAAACACCTGAAGGGTACAAAGTCATGTACACCCC...AGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGGGCAGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS TCA 90 bp GCAACTCCTTCTCTCAGCAGCGTCCAGCACTTGCAGAGCACAGCCTaGAACCCAAGCTCCCAAAAAGGTGTGCGAACAGCCAAAAGGAAA +
Preference number: 5 (lower is better)
Translates to: ATPSLSSVQHLQSTA*NPSSQKGVRTAKRK
Trigger: TTTCCTTTTGGCTGTTCGCACACCTTTTTGGGAGCTTGGGTTTCAGGCTGTGCTCTGCAAGTGCTGGACGCTGCTGAGAGAAGGAGTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS TCA 90 bp CAAGGCACGCGTTGGGTTGCAGAGTCCAGATCCCAGCTTCCAACGTaGCAGTCAAGGATGGGTCAACTCCAGGGTAGGTTAATCAAAGGA +
Preference number: 5 (lower is better)
Translates to: QGTRWVAESRSQLPT*QSRMGQLQGRLIKG
Trigger: TCCTTTGATTAACCTACCCTGGAGTTGACCCATCCTTGACTGTCACGTTGGAAGCTGGGATCTGGACTCTGCAACCCAACGCGTGCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481470.5
ENST00000682868.1
CDS TCA 90 bp TCTCCCTGGAATGAGAGAATAAAGACCCAAACCAGGTACTGTAGGTaGTCGTCCCTTTCTGCCTTCAGCAGTGGTCAGGGGGCAGTGGGT +
Preference number: 5 (lower is better)
Translates to: SPWNERIKTQTRYCR*SSLSAFSSGQGAVG
Trigger: ACCCACTGCCCCCTGACCACTGCTGAAGGCAGAAAGGGACGATCACCTACAGTACCTGGTTTGGGTCTTTATTCTCTCATTCCAGGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS TCA 90 bp AAAGGAATATCATTTGGCCAAAACGGGGTAGCTACCAGCCCAGACTaGCATCAGCCTATGGACAGCTGCCCGTGTGGGCCAACAGTAGCA +
Preference number: 5 (lower is better)
Translates to: KGISFGQNGVATSPD*HQPMDSCPCGPTVA
Trigger: TGCTACTGTTGGCCCACACGGGCAGCTGTCCATAGGCTGATGTCAGTCTGGGCTGGTAGCTACCCCGTTTTGGCCAAATGATATTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682097.1
CDS GCA 90 bp GGTGGCAGTTTTGTTGGCCACTCCATACACGAGGCCTGGACCGTATaGAGAAACACTTCCACTGTTGGGGTAGTTCACGTAGAACTGGAG +
Preference number: 5 (lower is better)
Translates to: GGSFVGHSIHEAWTV*RNTSTVGVVHVELE
Trigger: CTCCAGTTCTACGTGAACTACCCCAACAGTGGAAGTGTTTCTGCATACGGTCCAGGCCTCGTGTATGGAGTGGCCAACAAAACTGCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000481470.5
ENST00000490882.5
ENST00000493452.5
ENST00000682297.1
ENST00000682871.1
ENST00000683925.1
ENST00000684439.1
ENST00000684506.1
ENST00000684607.1
CDS GCA 90 bp TTACCCCCAAATCATTGCACCAGCAGGCCCATGACCACTGCTCAGTaGTTGGCTGCTCTTCCCTCCTTCCACCTAATTCTAACCAACCAG +
Preference number: 5 (lower is better)
Translates to: LPPNHCTSRPMTTAQ*LAALPSFHLILTNQ
Trigger: CTGGTTGGTTAGAATTAGGTGGAAGGAGGGAAGAGCAGCCAAGCACTGAGCAGTGGTCATGGGCCTGCTGGTGCAATGATTTGGGGGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS GCA 90 bp AAGGATACACTCAGTAGACTACCACCACAGAGCTGCTTCCCCCACTaGTCCATCTTGAACTGCAGTGAGCCACTCACTCTAGCGAAGGAC +
Preference number: 5 (lower is better)
Translates to: KDTLSRLPPQSCFPH*SILNCSEPLTLAKD
Trigger: GTCCTTCGCTAGAGTGAGTGGCTCACTGCAGTTCAAGATGGAGCAGTGGGGGAAGCAGCTCTGTGGTGGTAGTCTACTGAGTGTATCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000684439.1
CDS CCA 90 bp AGATGGCTGGCAGCCTTCAGTGACAGCCACCTTGAAGGGACTGTTTaGGATAGGCACGTCATCATATGTCACCTCCACTACATGGAGACC +
Preference number: 5 (lower is better)
Translates to: RWLAAFSDSHLEGTV*DRHVIICHLHYMET
Trigger: GGTCTCCATGTAGTGGAGGTGACATATGATGACGTGCCTATCCCAAACAGTCCCTTCAAGGTGGCTGTCACTGAAGGCTGCCAGCCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CCA 90 bp AGAGGGAGGTTTGCTTTGTTCAGAAGGTCAGGATACTGGGCGCTCTaGCGGCCAAGCACAGATACCTTTTCATTCCATGCACACTGCAGC +
Preference number: 5 (lower is better)
Translates to: RGRFALFRRSGYWAL*RPSTDTFSFHAHCS
Trigger: GCTGCAGTGTGCATGGAATGAAAAGGTATCTGTGCTTGGCCGCCAGAGCGCCCAGTATCCTGACCTTCTGAACAAAGCAAACCTCCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419752.4
ENST00000484981.1
CDS CCA 90 bp AAGGCAGTTAAGGAAGGAGGCCCTTCTGGTATACCCCGAGCACACTaGGGTTCCTGGACCATTTCATTAGGAAAATTGCTCAGCGGCTCC +
Preference number: 5 (lower is better)
Translates to: KAVKEGGPSGIPRAH*GSWTISLGKLLSGS
Trigger: GGAGCCGCTGAGCAATTTTCCTAATGAAATGGTCCAGGAACCCCAGTGTGCTCGGGGTATACCAGAAGGGCCTCCTTCCTTAACTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CCA 90 bp CCCCACTCCGGCTCCAGGTCCTGTGCACAGCACCATTTACGCATGTaGTATGGAATCCTTTCCGTGATTCCTGCTTCACAAATGACTCTG +
Preference number: 5 (lower is better)
Translates to: PHSGSRSCAQHHLRM*YGILSVIPASQMTL
Trigger: CAGAGTCATTTGTGAAGCAGGAATCACGGAAAGGATTCCATACCACATGCGTAAATGGTGCTGTGCACAGGACCTGGAGCCGGAGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CCA 90 bp CACTCTAGCGAAGGACACTTTCTTACTGCCCTTTTGGAAGGCAGTTaGTGTCCTCTCTTCAACTGTCAGATGCGCATGCCCTGTGAGCCC +
Preference number: 5 (lower is better)
Translates to: HSSEGHFLTALLEGS*CPLFNCQMRMPCEP
Trigger: GGGCTCACAGGGCATGCGCATCTGACAGTTGAAGAGAGGACACCAACTGCCTTCCAAAAGGGCAGTAAGAAAGTGTCCTTCGCTAGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684439.1
CDS CCA 90 bp CTCCATACACGAGGCCTGGACCGTATGCAGAAACACTTCCACTGTTaGGGTAGTTCACGTAGAACTGGAGTGGGCTCTCTGGGTTTACGA +
Preference number: 5 (lower is better)
Translates to: LHTRGLDRMQKHFHC*GSSRRTGVGSLGLR
Trigger: TCGTAAACCCAGAGAGCCCACTCCAGTTCTACGTGAACTACCCCAACAGTGGAAGTGTTTCTGCATACGGTCCAGGCCTCGTGTATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683925.1
CDS-3UTR CAA 90 bp CTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTACCCCTACACCTGGTTTCCTTaGTCTTCCACGAGCAACTCC +
Preference number: 5 (lower is better)
Translates to: LSHQAPGCSTFCRVGFYPYTWFP*SSTSNS
Trigger: GGAGTTGCTCGTGGAAGACAAAGGAAACCAGGTGTA...GGGGTAAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGCCAGGCTGCATGGGTTaGTACACACATCGATACACC +
Preference number: 5 (lower is better)
Translates to: CLLQWLVCSTKSSGLHLVPGCMG*YTHRYT
Trigger: GGTGTATCGATGTGTGTACAAACCCATGCAGCCTGG...CACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGCGCTTCAGGGCCAACTaGAACTTCAAAGGGGCTCTT +
Preference number: 5 (lower is better)
Translates to: CLLQWLVCSTKSSGLHLVRFRAN*NFKGAL
Trigger: AAGAGCCCCTTTGAAGTTCAAGTTGGCCCTGAAGCG...CACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTCGCTTCAGGGCCAACTaGAACTTCAAAGGGGCTCTT +
Preference number: 5 (lower is better)
Translates to: WSFHIRLRAVPLSVGWAFRFRAN*NFKGAL
Trigger: AAGAGCCCCTTTGAAGTTCAAGTTGGCCCTGAAGCG...AAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TGTTCCTGGTCTGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTCGCTTCAGGGCCAACTaGAACTTCAAAGGGGCTCTT +
Preference number: 5 (lower is better)
Translates to: CSWSVCCSGWSVPPRVLVRFRAN*NFKGAL
Trigger: AAGAGCCCCTTTGAAGTTCAAGTTGGCCCTGAAGCG...AACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACAGACCAGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TACCCCCAACACTCGCCCCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTTCCTTGGGCCAGTATTaGACATCACACGATCCATCA +
Preference number: 5 (lower is better)
Translates to: YPQHSPQILHLPQEWPLPSLGQY*TSHDPS
Trigger: TGATGGATCGTGTGATGTCAAATACTGGCCCAAGGA...AGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGGGCGAGTGTTGGGGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp ATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGAAACTCGGCCAGGTTGTaGACAATGCATCCAGATTTC +
Preference number: 5 (lower is better)
Translates to: MKLAGAGVECYVMGRTLGNSARL*TMHPDF
Trigger: GAAATCTGGATGCATTGTCAACAACCTGGCCGAGTT...TCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAGCCAACTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCTGGATGTCAATGCGTaGGCCTTCCCCATCCTGAGC +
Preference number: 5 (lower is better)
Translates to: GLQEGRQNSLHLISGFLHLDVNA*AFPILS
Trigger: GCTCAGGATGGGGAAGGCCAACGCATTGACATCCAG...GTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCCTGGATGTCAATGCGTaGGCCTTCCCCATCCTGAGC +
Preference number: 5 (lower is better)
Translates to: AQVCRKAGKIPYTSFLDFLDVNA*AFPILS
Trigger: GCTCAGGATGGGGAAGGCCAACGCATTGACATCCAG...GAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCGGGCTGGATGCAAAGAGAACTTaGATAGTGTATCGCCCAGCA +
Preference number: 5 (lower is better)
Translates to: FRVPAYNTRGPFTSGSGLDAKRT*IVYRPA
Trigger: TGCTGGGCGATACACTATCAAAGTTCTCTTTGCATC...CAGCCCGGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp ACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCATTCCAAAGCCCAGGAAGAGGGCTGTaGAACTGCACGTTGAGCGGG +
Preference number: 5 (lower is better)
Translates to: TTHLGSGNVPDTLTSFQSPGRGL*NCTLSG
Trigger: CCCGCTCAACGTGCAGTTCAACAGCCCTCTTCCTGG...GCTTTGGAATGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACCAGGAAGAGGGCTGTaGAACTGCACGTTGAGCGGG +
Preference number: 5 (lower is better)
Translates to: SAGRQAKFPTPHFWISAPPGRGL*NCTLSG
Trigger: CCCGCTCAACGTGCAGTTCAACAGCCCTCTTCCTGG...TGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CTGAGAAGTGTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTCTGCATGTTGCCCTGTaGGGTGGGTGTATATTTAAC +
Preference number: 5 (lower is better)
Translates to: LRSVRRPQSMGVLAMRSGLHVAL*GGCIFN
Trigger: GTTAAATATACACCCACCCAACAGGGCAACATGCAG...ACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTACACTTCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAAAGTACTCCCCGGGTTTaGTGGGAAGGTAAGAGACGG +
Preference number: 5 (lower is better)
Translates to: PDTTPATRVATSSGLSSKSTPRV*WEGKRR
Trigger: CCGTCTCTTACCTTCCCACAAAACCCGGGGAGTACT...TTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGACCTGGTCCAAAGACTTaGATCCTGCTGGTGTCCACG +
Preference number: 5 (lower is better)
Translates to: QWLVCSTKSSGLHLVYSGPGPKT*ILLVST
Trigger: CGTGGACACCAGCAGGATCAAAGTCTTTGGACCAGG...TCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GGAAACTGCTCGCCACTGCAGAATTTCTTCAGACCAAGGAAGGGACTGAAACGGCCTGGTCCAAAGACTTaGATCCTGCTGGTGTCCACG +
Preference number: 5 (lower is better)
Translates to: GNCSPLQNFFRPRKGLKRPGPKT*ILLVST
Trigger: CGTGGACACCAGCAGGATCAAAGTCTTTGGACCAGG...CCGTTTCAGTCCCTTCCTTGGTCTGAAGAAATTCTGCAGTGGCGAGCAGTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp AGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCGAGGCCCCTGAGGGGTaGGCAATGTGGGCCTTGATG +
Preference number: 5 (lower is better)
Translates to: SHLLCQMTTKLGVPFFSAEAPEG*AMWALM
Trigger: CATCAAGGCCCACATTGCCAACCCCTCAGGGGCCTC...GGCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TGGGACGGACCTTGGGATGAGGGCGTTAATCCATGGGCCCCTCTGAGATCACTTTTCTTGGTCCGTTATTaGAACAGCAAGCAGGCCTTC +
Preference number: 5 (lower is better)
Translates to: WDGPWDEGVNPWAPLRSLFLVRY*NSKQAF
Trigger: GAAGGCCTGCTTGCTGTTCAAATAACGGACCAAGAA...AAGTGATCTCAGAGGGGCCCATGGATTAACGCCCTCATCCCAAGGTCCGTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TCACCAGAGCGAGGGGACAGGTACTTGAGAGACATGTGGGCCTGGCTGCCACTCTTTGGGTTTTCCTTCTaGGTCCGTTATTTGAACAGC +
Preference number: 5 (lower is better)
Translates to: SPERGDRYLRDMWAWLPLFGFSF*VRYLNS
Trigger: GCTGTTCAAATAACGGACCAAGAAGGAAAACCCAAA...GAGTGGCAGCCAGGCCCACATGTCTCTCAAGTACCTGTCCCCTCGCTCTGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CTTCTCAGCCCCCTGAACAAGCTTGCATTTCTTAAGATTCTCCAATATGTCCCTCCCGTGGCCAGGCACTaGCTGGCATCACCCGTCTGT +
Preference number: 5 (lower is better)
Translates to: LLSPLNKLAFLKILQYVPPVARH*LASPVC
Trigger: ACAGACGGGTGATGCCAGCAAGTGCCTGGCCACGGG...AGGGACATATTGGAGAATCTTAAGAAATGCAAGCTTGTTCAGGGGGCTGAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCCCTTCCCGGCAGTCTaGGCATCAACCACAAAGCCT +
Preference number: 5 (lower is better)
Translates to: GLQEGRQNSLHLISGFLHPFPAV*ASTTKP
Trigger: AGGCTTTGTGGTTGATGCCAAGACTGCCGGGAAGGG...GTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TCATTCCAAAGCCAGCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTACCGTGCCGTCCTTGTaGTCCACAATCTCAGGTGTG +
Preference number: 5 (lower is better)
Translates to: SFQSQLRSAGRQAKFPTPTVPSL*STISGV
Trigger: CACACCTGAGATTGTGGACAACAAGGACGGCACGGT...AGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGGAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTAAGGTGGCAGTTTTGTaGGCCACTCCATACACGAGG +
Preference number: 5 (lower is better)
Translates to: WSFHIRLRAVPLSVGWAFKVAVL*ATPYTR
Trigger: CCTCGTGTATGGAGTGGCCAACAAAACTGCCACCTT...AAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCGGGCTGACCTTTGCATCAATCTaGCCTTTTGCGCCATTCAAC +
Preference number: 5 (lower is better)
Translates to: FRVPAYNTRGPFTSGSGLTFASI*PFAPFN
Trigger: GTTGAATGGCGCAAAAGGCAAGATTGATGCAAAGGT...CAGCCCGGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GTGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTAGGGGCTGTGCACCTTaGCATCAATCTTGCCTTTTG +
Preference number: 5 (lower is better)
Translates to: VVLSHQAPGCSTFCRVGFRGCAP*HQSCLL
Trigger: CAAAAGGCAAGATTGATGCAAAGGTGCACAGCCCCT...AAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CTGAGAAGTGTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTCAATCCATTTTAACCTaGGATGGGCCTTCGATGGTG +
Preference number: 5 (lower is better)
Translates to: LRSVRRPQSMGVLAMRSGQSILT*DGPSMV
Trigger: CACCATCGAAGGCCCATCCAAGGTTAAAATGGATTG...ACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTACACTTCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCCCGATCAGCAGCATGTaGGAGCCAGCTTTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: AQVCRKAGKIPYTSFLDFPISSM*EPALLQ
Trigger: CTGCAGCAAAGCTGGCTCCAACATGCTGCTGATCGG...GAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TCTGCCTGCCCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTGAAATGTCAGTCTCATaGTGTTCCTGGTCTGTCTGC +
Preference number: 5 (lower is better)
Translates to: SACPDHTTHLGSGNVPDTEMSVS*CSWSVC
Trigger: GCAGACAGACCAGGAACACAATGAGACTGACATTTC...AGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGGGCAGGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACGAGGGGACAGGTACTaGAGAGACATGTGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: SAGRQAKFPTPHFWISAPRGDRY*RDMWAW
Trigger: CCAGGCCCACATGTCTCTCAAGTACCTGTCCCCTCG...TGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGATGAGGGCGTTATCACTTTAAACATTTaGGTAAGACTGCCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: LGRVWSVMSWDGPWDEGVITLNI*VRLPRL
Trigger: CAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGAT...AACGCCCTCATCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CTGCTGTTGATTTGTCATGCCAACGACTGTGCCTGCACTGCCGTGGTGAGGCCAATCACTGCTGTTGATTaGTCATGCCAACGACTGTGC +
Preference number: 5 (lower is better)
Translates to: LLLICHANDCACTAVVRPITAVD*SCQRLC
Trigger: GCACAGTCGTTGGCATGACAAATCAACAGCAGTGAT...TGGCCTCACCACGGCAGTGCAGGCACAGTCGTTGGCATGACAAATCAACAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470231.1
CDS TCA 90 bp GGACTCTTAGGAATAGTGTCCCCAGCAAAGAAGATCTTGACCACGTaGGGGCCAGGCTGCATGGGTTTGTACACACATCGATACACCTGG +
Preference number: 5 (lower is better)
Translates to: GLLGIVSPAKKILTT*GPGCMGLYTHRYTW
Trigger: CCAGGTGTATCGATGTGTGTACAAACCCATGCAGCCTGGCCCTCACGTGGTCAAGATCTTCTTTGCTGGGGACACTATTCCTAAGAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682097.1
ENST00000682868.1
ENST00000682871.1
ENST00000682987.1
ENST00000683511.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS TCA 90 bp ACACGACGGCTGGCGATTCGTGGAGCACGGATGGTGACGCAAAGGTaGTCTTATTACAGAAAAAGCAGGGATCATCGTGATGGGCTGATC +
Preference number: 5 (lower is better)
Translates to: TRRLAIRGARMVTQR*SYYRKSRDHRDGLI
Trigger: GATCAGCCCATCACGATGATCCCTGCTTTTTCTGTAATAAGATCACCTTTGCGTCACCATCCGTGCTCCACGAATCGCCAGCCGTCGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000684439.1
CDS TCA 90 bp CGTGATCACAGACACGACGGCTGGCGATTCGTGGAGCACGGATGGTaGCGCAAAGGTGATCTTATTACAGAAAAAGCAGGGATCATCGTG +
Preference number: 5 (lower is better)
Translates to: RDHRHDGWRFVEHGW*RKGDLITEKAGIIV
Trigger: CACGATGATCCCTGCTTTTTCTGTAATAAGATCACCTTTGCGTCACCATCCGTGCTCCACGAATCGCCAGCCGTCGTGTCTGTGATCACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000684439.1
CDS GCA 90 bp TCTTCTCTTACCCCCAAATCATTGCACCAGCAGGCCCATGACCACTaGTCAGTGCTTGGCTGCTCTTCCCTCCTTCCACCTAATTCTAAC +
Preference number: 5 (lower is better)
Translates to: SSLTPKSLHQQAHDH*SVLGCSSLLPPNSN
Trigger: GTTAGAATTAGGTGGAAGGAGGGAAGAGCAGCCAAGCACTGAGCAGTGGTCATGGGCCTGCTGGTGCAATGATTTGGGGGTAAGAGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS GCA 90 bp GAACCATACTGGAAGGATACACTCAGTAGACTACCACCACAGAGCTaGTTCCCCCACTGCTCCATCTTGAACTGCAGTGAGCCACTCACT +
Preference number: 5 (lower is better)
Translates to: EPYWKDTLSRLPPQS*FPHCSILNCSEPLT
Trigger: AGTGAGTGGCTCACTGCAGTTCAAGATGGAGCAGTGGGGGAAGCAGCTCTGTGGTGGTAGTCTACTGAGTGTATCCTTCCAGTATGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000684439.1
CDS CCA 90 bp GCTTCCAACCCTGGACCTTTTGCAGTGACTTTACTGGCATCTCCCTaGGCCTTGTCAACACTCACTTCAAATGGGCTCTTGGAGATGTGC +
Preference number: 5 (lower is better)
Translates to: ASNPGPFAVTLLASP*ALSTLTSNGLLEMC
Trigger: GCACATCTCCAAGAGCCCATTTGAAGTGAGTGTTGACAAGGCCCAGGGAGATGCCAGTAAAGTCACTGCAAAAGGTCCAGGGTTGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682097.1
ENST00000682868.1
ENST00000682871.1
ENST00000682987.1
ENST00000683511.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS CCA 90 bp CTGTGGCCTGGTCAGTGGCAAATGGAGATTAGTTGGGAACCATACTaGAAGGATACACTCAGTAGACTACCACCACAGAGCTGCTTCCCC +
Preference number: 5 (lower is better)
Translates to: LWPGQWQMEISWEPY*KDTLSRLPPQSCFP
Trigger: GGGGAAGCAGCTCTGTGGTGGTAGTCTACTGAGTGTATCCTTCCAGTATGGTTCCCAACTAATCTCCATTTGCCACTGACCAGGCCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684439.1
CDS CCA 90 bp CAAACTGCACCGAGCGTGATCACAGACACGACGGCTGGCGATTCGTaGAGCACGGATGGTGACGCAAAGGTGATCTTATTACAGAAAAAG +
Preference number: 5 (lower is better)
Translates to: QTAPSVITDTTAGDS*STDGDAKVILLQKK
Trigger: CTTTTTCTGTAATAAGATCACCTTTGCGTCACCATCCGTGCTCCACGAATCGCCAGCCGTCGTGTCTGTGATCACGCTCGGTGCAGTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000684439.1
CDS CCA 90 bp GGACACAAACAAAATTGGTGCTCATTAAGGGGTGAACGAAGACCCTaGACAACTGGCATCTTGACGTCCACCTCTCTACAGGTCTGGCGC +
Preference number: 5 (lower is better)
Translates to: GHKQNWCSLRGERRP*TTGILTSTSLQVWR
Trigger: GCGCCAGACCTGTAGAGAGGTGGACGTCAAGATGCCAGTTGTCCAGGGTCTTCGTTCACCCCTTAATGAGCACCAATTTTGTTTGTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683925.1
CDS-3UTR CAA 90 bp CTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTACCCCGAGTATGTCTTGTTCTaGTCACTGTCAGGGGTCACT +
Preference number: 5 (lower is better)
Translates to: LSHQAPGCSTFCRVGFYPEYVLF*SLSGVT
Trigger: AGTGACCCCTGACAGTGACAAGAACAAGACATACTC...GGGGTAAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TGTTCCTGGTCTGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTACACCTGGTTTCCTTaGTCTTCCACGAGCAACTCC +
Preference number: 5 (lower is better)
Translates to: CSWSVCCSGWSVPPRVLVYTWFP*SSTSNS
Trigger: GGAGTTGCTCGTGGAAGACAAAGGAAACCAGGTGTA...AACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACAGACCAGGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp AGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCCGGCAGGCATTTGGATaGCAGGCTTCCCCAACCTGC +
Preference number: 5 (lower is better)
Translates to: SHLLCQMTTKLGVPFFSARQAFG*QASPTC
Trigger: GCAGGTTGGGGAAGCCTGCAATCCAAATGCCTGCCG...GGCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGAATGTACGGGCTGTCCTaGATGTCTTCGTCGTCACAC +
Preference number: 5 (lower is better)
Translates to: QWLVCSTKSSGLHLVYSGMYGLS*MSSSSH
Trigger: GTGTGACGACGAAGACATCAAGGACAGCCCGTACAT...TCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTACCCCAACTCGGCCAGGTTGTaGACAATGCATCCAGATTTC +
Preference number: 5 (lower is better)
Translates to: LSHQAPGCSTFCRVGFYPNSARL*TMHPDF
Trigger: GAAATCTGGATGCATTGTCAACAACCTGGCCGAGTT...GGGGTAAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp ACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCATTCCAAAGCCTGGATGTCAATGCGTaGGCCTTCCCCATCCTGAGC +
Preference number: 5 (lower is better)
Translates to: TTHLGSGNVPDTLTSFQSLDVNA*AFPILS
Trigger: GCTCAGGATGGGGAAGGCCAACGCATTGACATCCAG...GCTTTGGAATGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TACCCCCAACACTCGCCCCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTGCAGGAGGCACATATTaGACTGTGAACGTATCATTG +
Preference number: 5 (lower is better)
Translates to: YPQHSPQILHLPQEWPLPAGGTY*TVNVSL
Trigger: CAATGATACGTTCACAGTCAAATATGTGCCTCCTGC...AGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGGGCGAGTGTTGGGGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCGGGCTGCTGTTTTCCAGCCCATaGAGTTTTATCTTGCTCAGA +
Preference number: 5 (lower is better)
Translates to: FRVPAYNTRGPFTSGSGLLFSSP*SFILLR
Trigger: TCTGAGCAAGATAAAACTCAATGGGCTGGAAAACAG...CAGCCCGGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAACAGGTCCCATCACCATaGTCGGAGCACTCGATTTTG +
Preference number: 5 (lower is better)
Translates to: PDTTPATRVATSSGLSSKQVPSP*SEHSIL
Trigger: CAAAATCGAGTGCTCCGACAATGGTGATGGGACCTG...TTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGATCTTCAGTACTCCCCGGGTTTaGTGGGAAGGTAAGAGACGG +
Preference number: 5 (lower is better)
Translates to: AGLFHQEFWFAPSVLRIFSTPRV*WEGKRR
Trigger: CCGTCTCTTACCTTCCCACAAAACCCGGGGAGTACT...GAAGATCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTTCTTCAAAGAGGATGTaGACGAAGTACTCCCCGGGT +
Preference number: 5 (lower is better)
Translates to: WSFHIRLRAVPLSVGWAFSSKRM*TKYSPG
Trigger: ACCCGGGGAGTACTTCGTCAACATCCTCTTTGAAGA...AAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGACCTGGTCCAAAGACTTaGATCCTGCTGGTGTCCACG +
Preference number: 5 (lower is better)
Translates to: PTFRPKTRRSFILSCLYRPGPKT*ILLVST
Trigger: CGTGGACACCAGCAGGATCAAAGTCTTTGGACCAGG...TCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp AGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCATTGGCAATGTGGGCCTaGATGTGGTCACCCCCAACC +
Preference number: 5 (lower is better)
Translates to: RSAGRQAKFPTPHFWISALAMWA*MWSPPT
Trigger: GGTTGGGGGTGACCACATCAAGGCCCACATTGCCAA...TGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GGAAACTGCTCGCCACTGCAGAATTTCTTCAGACCAAGGAAGGGACTGAAACGGCCACTGGCAGTCACTTaGCTGGCATCATATGTGGGA +
Preference number: 5 (lower is better)
Translates to: GNCSPLQNFFRPRKGLKRPLAVT*LASYVG
Trigger: TCCCACATATGATGCCAGCAAAGTGACTGCCAGTGG...CCGTTTCAGTCCCTTCCTTGGTCTGAAGAAATTCTGCAGTGGCGAGCAGTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TTTGGCTTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCTGGACAATGGCTCTTTaGGGTTTTCCTTCTTGGTCC +
Preference number: 5 (lower is better)
Translates to: FGFRVPAYNTRGPFTSGSWTMAL*GFPSWS
Trigger: GGACCAAGAAGGAAAACCCAAAAGAGCCATTGTCCA...GGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAAGCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GGAAACTGCTCGCCACTGCAGAATTTCTTCAGACCAAGGAAGGGACTGAAACGGAAGGTGGCAGTTTTGTaGGCCACTCCATACACGAGG +
Preference number: 5 (lower is better)
Translates to: GNCSPLQNFFRPRKGLKRKVAVL*ATPYTR
Trigger: CCTCGTGTATGGAGTGGCCAACAAAACTGCCACCTT...CCGTTTCAGTCCCTTCCTTGGTCTGAAGAAATTCTGCAGTGGCGAGCAGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAAAAGGTGGCAGTTTTGTaGGCCACTCCATACACGAGG +
Preference number: 5 (lower is better)
Translates to: PDTTPATRVATSSGLSSKKVAVL*ATPYTR
Trigger: CCTCGTGTATGGAGTGGCCAACAAAACTGCCACCTT...TTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TTTGGCTTCCGTGTCCCAGCTTACAACACCCGTGGTCCTTTCACATCAGGCTCCGGGATGTGCTTGTCATaGTACTTGACCAGAATGCTG +
Preference number: 5 (lower is better)
Translates to: FGFRVPAYNTRGPFTSGSGMCLS*YLTRML
Trigger: CAGCATTCTGGTCAAGTACAATGACAAGCACATCCC...GGAGCCTGATGTGAAAGGACCACGGGTGTTGTAAGCTGGGACACGGAAGCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CTTCTCAGCCCCCTGAACAAGCTTGCATTTCTTAAGATTCTCCAATATGTCCCTTGCTGCCCACGGTACTaGACGCTGACCGTGTGCACG +
Preference number: 5 (lower is better)
Translates to: LLSPLNKLAFLKILQYVPCCPRY*TLTVCT
Trigger: CGTGCACACGGTCAGCGTCAAGTACCGTGGGCAGCA...AGGGACATATTGGAGAATCTTAAGAAATGCAAGCTTGTTCAGGGGGCTGAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTAAAGCAGTGGTAGTTACCAGGCTCTaGGGCAATATAAGATACACC +
Preference number: 5 (lower is better)
Translates to: VRRPQSMGVLAMRSGKAVVVTRL*GNIRYT
Trigger: GGTGTATCTTATATTGCCCAAGAGCCTGGTAACTAC...CACTGCTTTACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GGAAACTGCTCGCCACTGCAGAATTTCTTCAGACCAAGGAAGGGACTGAAACGGACCACGTGGCTCCCATaGAACTTGACATCGATGGTG +
Preference number: 5 (lower is better)
Translates to: GNCSPLQNFFRPRKGLKRTTWLP*NLTSMV
Trigger: CACCATCGATGTCAAGTTCAATGGGAGCCACGTGGT...CCGTTTCAGTCCCTTCCTTGGTCTGAAGAAATTCTGCAGTGGCGAGCAGTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CACTTTAACCTCATTCCAAAGCCAGCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCGATCAGCAGCATGTaGGAGCCAGCTTTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: HFNLIPKPAQVCRKAGKIPISSM*EPALLQ
Trigger: CTGCAGCAAAGCTGGCTCCAACATGCTGCTGATCGG...AATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGGAATGAGGTTAAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCCACGAGGGGACAGGTACTaGAGAGACATGTGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: SSPLPNDNQTRCPLFLCPRGDRY*RDMWAW
Trigger: CCAGGCCCACATGTCTCTCAAGTACCTGTCCCCTCG...TGGGCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CCCAACACTCGCCCCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGATCACTTTAAACATTTaGGTAAGACTGCCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: PNTRPRYYTCHKSGHFLRITLNI*VRLPRL
Trigger: CAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGAT...CCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGGGGCGAGTGTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGAGACCACACTACACATTaGGGCTCAGGCAACGTCCCT +
Preference number: 5 (lower is better)
Translates to: PTFRPKTRRSFILSCLYRDHTTH*GSGNVP
Trigger: AGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTC...TCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAAGCGTTTGATTCCAGTTaGGCTTCCGTGTCCCAGCTT +
Preference number: 5 (lower is better)
Translates to: PDTTPATRVATSSGLSSKAFDSS*ASVSQL
Trigger: AAGCTGGGACACGGAAGCCAAACTGGAATCAAACGC...TTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS TCA 90 bp GTGGTGGTAGTGACTTCTGAGTGCCAGGGATTTGGCATTTATGCTTaGCTCGCAACCTTAGTGCGGATTCAGTTGCCAAGGATAGCTGGC +
Preference number: 5 (lower is better)
Translates to: VVVVTSECQGFGIYA*LATLVRIQLPRIAG
Trigger: GCCAGCTATCCTTGGCAACTGAATCCGCACTAAGGTTGCGAGTCAAGCATAAATGCCAAATCCCTGGCACTCAGAAGTCACTACCACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684107.1
CDS GCA 90 bp CATGCCATTCAACCTGTAAGGAATCAACCCCACAGTGGTCTTCTCTaGCCACCCCGACTCCTAGCCCTATGTAAGCACTTTCATTTCTGC +
Preference number: 5 (lower is better)
Translates to: HAIQPVRNQPHSGLL*PPRLLALCKHFHFC
Trigger: GCAGAAATGAAAGTGCTTACATAGGGCTAGGAGTCGGGGTGGGCAGAGAAGACCACTGTGGGGTTGATTCCTTACAGGTTGAATGGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683925.1
CDS CCA 90 bp GAAGTGTGTAGGTTCATTTGCCTTCAGACCACTTCTCTCCACACCTaGCCCAAACACTTTGACCTTCTGAGGATGGCTACCTTGCCCGAT +
Preference number: 5 (lower is better)
Translates to: EVCRFICLQTTSLHT*PKHFDLLRMATLPD
Trigger: ATCGGGCAAGGTAGCCATCCTCAGAAGGTCAAAGTGTTTGGGCCAGGTGTGGAGAGAAGTGGTCTGAAGGCAAATGAACCTACACACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS CCA 90 bp GGTTCTGCCTCCTCCCAGCTGACTGCTTTTTGGGGGAGTGTTGTTTaGGGAGTGACTCAACCTCTGCATCTCACTTTCCACATCTGTAAA +
Preference number: 5 (lower is better)
Translates to: GSASSQLTAFWGSVV*GVTQPLHLTFHICK
Trigger: TTTACAGATGTGGAAAGTGAGATGCAGAGGTTGAGTCACTCCCCAAACAACACTCCCCCAAAAAGCAGTCAGCTGGGAGGAGGCAGAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CCA 90 bp AGTGAGCCACTCACTCTAGCGAAGGACACTTTCTTACTGCCCTTTTaGAAGGCAGTTGGTGTCCTCTCTTCAACTGTCAGATGCGCATGC +
Preference number: 5 (lower is better)
Translates to: SEPLTLAKDTFLLPF*KAVGVLSSTVRCAC
Trigger: GCATGCGCATCTGACAGTTGAAGAGAGGACACCAACTGCCTTCCAAAAGGGCAGTAAGAAAGTGTCCTTCGCTAGAGTGAGTGGCTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684439.1
CDS-3UTR CAA 90 bp TGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTGAGTATGTCTTGTTCTaGTCACTGTCAGGGGTCACT +
Preference number: 5 (lower is better)
Translates to: WSFHIRLRAVPLSVGWAFEYVLF*SLSGVT
Trigger: AGTGACCCCTGACAGTGACAAGAACAAGACATACTC...AAAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACGCTTTGGTGTCAACCTaGAAATCTGTGGTCTCCCGG +
Preference number: 5 (lower is better)
Translates to: GLQEGRQNSLHLISGFLHALVST*KSVVSR
Trigger: CCGGGAGACCACAGATTTCAAGGTTGACACCAAAGC...GTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGCCACTTCCTGCAGCTTaGGTGTCAACCTTGAAATCT +
Preference number: 5 (lower is better)
Translates to: CLLQWLVCSTKSSGLHLVPLPAA*VSTLKS
Trigger: AGATTTCAAGGTTGACACCAAAGCTGCAGGAAGTGG...CACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGATATTCGCCAGGCTCCTaGGGCCAGTATTTGACATCA +
Preference number: 5 (lower is better)
Translates to: QWLVCSTKSSGLHLVYSGYSPGS*GQYLTS
Trigger: TGATGTCAAATACTGGCCCAAGGAGCCTGGCGAATA...TCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TGTTCCTGGTCTGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTCTGCATGTTGCCCTGTaGGGTGGGTGTATATTTAAC +
Preference number: 5 (lower is better)
Translates to: CSWSVCCSGWSVPPRVLVLHVAL*GGCIFN
Trigger: GTTAAATATACACCCACCCAACAGGGCAACATGCAG...AACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACAGACCAGGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGACCAGTACCAGCTCCTTaGGTATCGATGGTGAACTCG +
Preference number: 5 (lower is better)
Translates to: PTFRPKTRRSFILSCLYRPVPAP*VSMVNS
Trigger: CGAGTTCACCATCGATACCAAAGGAGCTGGTACTGG...TCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TCCCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACACCAGTACCAGCTCCTTaGGTATCGATGGTGAACTCG +
Preference number: 5 (lower is better)
Translates to: SQLSGQRPAGVSFCPVCTPVPAP*VSMVNS
Trigger: CGAGTTCACCATCGATACCAAAGGAGCTGGTACTGG...TGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp AGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGTGACACGGCGGGCTCCACCTaGACCCGGGCGGGGAAGTGT +
Preference number: 5 (lower is better)
Translates to: RSFILSCLYRSLFSRKSDTAGST*TRAGKC
Trigger: ACACTTCCCCGCCCGGGTCAAGGTGGAGCCCGCCGT...GTCACTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCATCAGTGACAGCCACCTaGAAGGGACTGTTTGGGATA +
Preference number: 5 (lower is better)
Translates to: PDHTTHLGSGNVPDTLTSSVTAT*KGLFGI
Trigger: TATCCCAAACAGTCCCTTCAAGGTGGCTGTCACTGA...TGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATTTCAATCCAGGTCCTaGGGCTTGCACCCTAGATGG +
Preference number: 5 (lower is better)
Translates to: PTFRPKTRRSFILSCLYRFQSRS*GLHPRW
Trigger: CCATCTAGGGTGCAAGCCCAAGGACCTGGATTGAAA...TCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTTTCAATCCAGGTCCTaGGGCTTGCACCCTAGATGG +
Preference number: 5 (lower is better)
Translates to: AQVCRKAGKIPYTSFLDFFQSRS*GLHPRW
Trigger: CCATCTAGGGTGCAAGCCCAAGGACCTGGATTGAAA...GAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TGTTCCTGGTCTGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTGTGAAGACATTGGGCTaGTTGGTAAAGGCCTCTTTC +
Preference number: 5 (lower is better)
Translates to: CSWSVCCSGWSVPPRVLVVKTLG*LVKASF
Trigger: GAAAGAGGCCTTTACCAACAAGCCCAATGTCTTCAC...AACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACAGACCAGGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTTTACAACAGCCGGGGCCGGCAATCTaGACCTTGCTGGGGTCCACA +
Preference number: 5 (lower is better)
Translates to: YVPQESSLGLISEGILQQPGPAI*TLLGST
Trigger: TGTGGACCCCAGCAAGGTCAAGATTGCCGGCCCCGG...CTGTTGTAAAATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp ATTCTCCAATATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTGGAGCCAGGCCAGCCTaGCTGCTGTCCACCGTGAAG +
Preference number: 5 (lower is better)
Translates to: ILQYVPQESSLGLISEGIGARPA*LLSTVK
Trigger: CTTCACGGTGGACAGCAGCAAGGCTGGCCTGGCTCC...AATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATATTGGAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGATCTTCTATGTGGGAAGGACCTaGACCTTGAAGGGACTGCGA +
Preference number: 5 (lower is better)
Translates to: AGLFHQEFWFAPSVLRIFYVGRT*TLKGLR
Trigger: TCGCAGTCCCTTCAAGGTCAAGGTCCTTCCCACATA...GAAGATCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCACATCTCGGGCATCAATaGCAAAGTCCACAGGTAGAC +
Preference number: 5 (lower is better)
Translates to: PDHTTHLGSGNVPDTLTSHLGHQ*QSPQVD
Trigger: GTCTACCTGTGGACTTTGCAATTGATGCCCGAGATG...TGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GTAAGAAGGCCACAGAGCATGGGGGTGTTGGCGATGAGGAGCGGTAAAGCAGTGGACATATCACTGCTGTaGATTTCTGGGATTTTCAGG +
Preference number: 5 (lower is better)
Translates to: VRRPQSMGVLAMRSGKAVDISLL*ISGIFR
Trigger: CCTGAAAATCCCAGAAATCAACAGCAGTGATATGTC...CACTGCTTTACCGCTCCTCATCGCCAACACCCCCATGCTCTGTGGCCTTCTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TCCCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAACCACGTGGCTCCCATaGAACTTGACATCGATGGTG +
Preference number: 5 (lower is better)
Translates to: SQLSGQRPAGVSFCPVCTTTWLP*NLTSMV
Trigger: CACCATCGATGTCAAGTTCAATGGGAGCCACGTGGT...TGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGAACCACGTGGCTCCCATaGAACTTGACATCGATGGTG +
Preference number: 5 (lower is better)
Translates to: PTFRPKTRRSFILSCLYRTTWLP*NLTSMV
Trigger: CACCATCGATGTCAAGTTCAATGGGAGCCACGTGGT...TCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CTTCTCAGCCCCCTGAACAAGCTTGCATTTCTTAAGATTCTCCAATATGTCCCTCGAGGGGACAGGTACTaGAGAGACATGTGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: LLSPLNKLAFLKILQYVPRGDRY*RDMWAW
Trigger: CCAGGCCCACATGTCTCTCAAGTACCTGTCCCCTCG...AGGGACATATTGGAGAATCTTAAGAAATGCAAGCTTGTTCAGGGGGCTGAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp ATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATGGGACGGACCTTGGGAATCACTTTAAACATTTaGGTAAGACTGCCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: MKLAGAGVECYVMGRTLGITLNI*VRLPRL
Trigger: CAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGAT...TCCCAAGGTCCGTCCCATGACATAACACTCCACACCCGCCCCAGCCAACTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp AGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCAGACCACACTACACATTaGGGCTCAGGCAACGTCCCT +
Preference number: 5 (lower is better)
Translates to: RSAGRQAKFPTPHFWISADHTTH*GSGNVP
Trigger: AGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTC...TGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TGTTCCTGGTCTGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTATTTACAGTCGGCGTTaGATTCCAGTTTGGCTTCCG +
Preference number: 5 (lower is better)
Translates to: CSWSVCCSGWSVPPRVLVIYSRR*IPVWLP
Trigger: CGGAAGCCAAACTGGAATCAAACGCCGACTGTAAAT...AACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACAGACCAGGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS TCA 90 bp ATTTGTCTAGAATTCACCAGCGTGGCCATCCTTCAAGAAAGCAGATaGCTGGAGGCACTGGGGTGTGGCAAGCTTGGAAGAGACACAATC +
Preference number: 5 (lower is better)
Translates to: ICLEFTSVAILQESR*LEALGCGKLGRDTI
Trigger: GATTGTGTCTCTTCCAAGCTTGCCACACCCCAGTGCCTCCAGTCATCTGCTTTCTTGAAGGATGGCCACGCTGGTGAATTCTAGACAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477629.1
ENST00000683114.1
CDS TCA 90 bp AAGAACCTGTTAACTAAAGCCAAGAAGGCGGAGTCGACAGCTCCGTaGCTCGTTAGGAAGGATGGGAGATGCAGTGTAGAAAGACAACCC +
Preference number: 5 (lower is better)
Translates to: KNLLTKAKKAESTAP*LVRKDGRCSVERQP
Trigger: GGGTTGTCTTTCTACACTGCATCTCCCATCCTTCCTAACGAGTCACGGAGCTGTCGACTCCGCCTTCTTGGCTTTAGTTAACAGGTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477629.1
CDS TCA 90 bp AACCCATCTGCTCTCCATTCAGGCACTTACTGTTTTCCAGCCCATTaGGTTTTATCTTGCTCAGATCCAGCGGTGCAGCAACACCCACAG +
Preference number: 5 (lower is better)
Translates to: NPSALHSGTYCFPAH*VLSCSDPAVQQHPQ
Trigger: CTGTGGGTGTTGCTGCACCGCTGGATCTGAGCAAGATAAAACTCAATGGGCTGGAAAACAGTAAGTGCCTGAATGGAGAGCAGATGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684107.1
CDS TCA 90 bp AAAGGTGATCTTATTACAGAAAAAGCAGGGATCATCGTGATGGGCTaGTCAGTGAGGGGCACACCAATGACCAGGACACCCACAGGGCTT +
Preference number: 5 (lower is better)
Translates to: KGDLITEKAGIIVMG*SVRGTPMTRTPTGL
Trigger: AAGCCCTGTGGGTGTCCTGGTCATTGGTGTGCCCCTCACTGATCAGCCCATCACGATGATCCCTGCTTTTTCTGTAATAAGATCACCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684439.1
CDS GCA 90 bp CGTGTGAGAGTAGTCATAATTATCGATGATATCCAAATCCTTCACTaGATCGCCAGGAAGAGGGCTGTTGAACTGCACGTTGAGCGGGGC +
Preference number: 5 (lower is better)
Translates to: RVRVVIIIDDIQILH*IARKRAVELHVERG
Trigger: GCCCCGCTCAACGTGCAGTTCAACAGCCCTCTTCCTGGCGATGCAGTGAAGGATTTGGATATCATCGATAATTATGACTACTCTCACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684107.1
ENST00000684506.1
ENST00000684607.1
CDS GCA 90 bp TGGGGAACTAAGACAATGACAAAGCCACGTATCACGTGCATCATGTaGCTGGCATTCCCAGAGGTTCTGGTATGTACCACATGGACACCA +
Preference number: 5 (lower is better)
Translates to: WGTKTMTKPRITCIM*LAFPEVLVCTTWTP
Trigger: TGGTGTCCATGTGGTACATACCAGAACCTCTGGGAATGCCAGGCACATGATGCACGTGATACGTGGCTTTGTCATTGTCTTAGTTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS GCA 90 bp CTCTCTCTCTGGGGAACTAAGACAATGACAAAGCCACGTATCACGTaGATCATGTGCCTGGCATTCCCAGAGGTTCTGGTATGTACCACA +
Preference number: 5 (lower is better)
Translates to: LSLWGTKTMTKPRIT*IMCLAFPEVLVCTT
Trigger: TGTGGTACATACCAGAACCTCTGGGAATGCCAGGCACATGATGCACGTGATACGTGGCTTTGTCATTGTCTTAGTTCCCCAGAGAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS GCA 90 bp AAATCATTGCACCAGCAGGCCCATGACCACTGCTCAGTGCTTGGCTaGTCTTCCCTCCTTCCACCTAATTCTAACCAACCAGATAAAACC +
Preference number: 5 (lower is better)
Translates to: KSLHQQAHDHCSVLG*SSLLPPNSNQPDKT
Trigger: GGTTTTATCTGGTTGGTTAGAATTAGGTGGAAGGAGGGAAGAGCAGCCAAGCACTGAGCAGTGGTCATGGGCCTGCTGGTGCAATGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS GCA 90 bp CTCTGCCCACCCCGACTCCTAGCCCTATGTAAGCACTTTCATTTCTaGAGTGTTCGGGTGCACATCAGGAAAAGACCTAAGTGTTCACAA +
Preference number: 5 (lower is better)
Translates to: LCPPRLLALCKHFHF*SVRVHIRKRPKCSQ
Trigger: TTGTGAACACTTAGGTCTTTTCCTGATGTGCACCCGAACACTGCAGAAATGAAAGTGCTTACATAGGGCTAGGAGTCGGGGTGGGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683925.1
CDS GCA 90 bp CTGGAGTGGGCTCTCTGGGTTTACGAAGGACACAAACAAAATTGGTaGTCATTAAGGGGTGAACGAAGACCCTGGACAACTGGCATCTTG +
Preference number: 5 (lower is better)
Translates to: LEWALWVYEGHKQNW*SLRGERRPWTTGIL
Trigger: CAAGATGCCAGTTGTCCAGGGTCTTCGTTCACCCCTTAATGAGCACCAATTTTGTTTGTGTCCTTCGTAAACCCAGAGAGCCCACTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683925.1
CDS CCA 90 bp GGTGGGAAAAGAGAAAGCAGGGGTTATGGGACAAGAGCTACTACTTaGCTGTTACCTCCTCTACAGCTCCAAACAAGCCTATTAGGTGGG +
Preference number: 5 (lower is better)
Translates to: GGKRESRGYGTRATT*LLPPLQLQTSLLGG
Trigger: CCCACCTAATAGGCTTGTTTGGAGCTGTAGAGGAGGTAACAGCCAAGTAGTAGCTCTTGTCCCATAACCCCTGCTTTCTCTTTTCCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CCA 90 bp CGTGGCCATCCTTCAAGAAAGCAGATGACTGGAGGCACTGGGGTGTaGCAAGCTTGGAAGAGACACAATCTAACTCAAACCATCTCAAAG +
Preference number: 5 (lower is better)
Translates to: RGHPSRKQMTGGTGV*QAWKRHNLTQTISK
Trigger: CTTTGAGATGGTTTGAGTTAGATTGTGTCTCTTCCAAGCTTGCCACACCCCAGTGCCTCCAGTCATCTGCTTTCTTGAAGGATGGCCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477629.1
ENST00000683114.1
CDS CCA 90 bp GAACTGGAGTGGGCTCTCTGGGTTTACGAAGGACACAAACAAAATTaGTGCTCATTAAGGGGTGAACGAAGACCCTGGACAACTGGCATC +
Preference number: 5 (lower is better)
Translates to: ELEWALWVYEGHKQN*CSLRGERRPWTTGI
Trigger: GATGCCAGTTGTCCAGGGTCTTCGTTCACCCCTTAATGAGCACCAATTTTGTTTGTGTCCTTCGTAAACCCAGAGAGCCCACTCCAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683925.1
CDS-3UTR CAA 90 bp GAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACACAGCTCCATCCACAATGGCTTaGCTATCGATGGACACGAGC +
Preference number: 5 (lower is better)
Translates to: EGRQNSLHLISGFLHHTAPSTMA*LSMDTS
Trigger: GCTCGTGTCCATCGATAGCAAAGCCATTGTGGATGG...AGCTGTGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACAAAGAGGACTGTGACTTaGTGTAGCCCGGTGACCTTG +
Preference number: 5 (lower is better)
Translates to: CRKAGKIPYTSFLDFCTTKRTVT*CSPVTL
Trigger: CAAGGTCACCGGGCTACACAAAGTCACAGTCCTCTT...TGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CACTTTAACCTCATTCCAAAGCCAGCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCAGGCTGCATGGGTTaGTACACACATCGATACACC +
Preference number: 5 (lower is better)
Translates to: HFNLIPKPAQVCRKAGKIPGCMG*YTHRYT
Trigger: GGTGTATCGATGTGTGTACAAACCCATGCAGCCTGG...AATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGGAATGAGGTTAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGACCACTTCCTGCAGCTTaGGTGTCAACCTTGAAATCT +
Preference number: 5 (lower is better)
Translates to: QWLVCSTKSSGLHLVYSGPLPAA*VSTLKS
Trigger: AGATTTCAAGGTTGACACCAAAGCTGCAGGAAGTGG...TCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAACCACTTCCTGCAGCTTaGGTGTCAACCTTGAAATCT +
Preference number: 5 (lower is better)
Translates to: PDTTPATRVATSSGLSSKPLPAA*VSTLKS
Trigger: AGATTTCAAGGTTGACACCAAAGCTGCAGGAAGTGG...TTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTATTCGCCAGGCTCCTaGGGCCAGTATTTGACATCA +
Preference number: 5 (lower is better)
Translates to: AQVCRKAGKIPYTSFLDFYSPGS*GQYLTS
Trigger: TGATGTCAAATACTGGCCCAAGGAGCCTGGCGAATA...GAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp ACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCATTCCAAAGCATGTACGGGCTGTCCTaGATGTCTTCGTCGTCACAC +
Preference number: 5 (lower is better)
Translates to: TTHLGSGNVPDTLTSFQSMYGLS*MSSSSH
Trigger: GTGTGACGACGAAGACATCAAGGACAGCCCGTACAT...GCTTTGGAATGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAAACCTAGTGAACTCGGCCAGGTaGTTGACAATGCATCCAGAT +
Preference number: 5 (lower is better)
Translates to: YYTCHKSGHFLRTKQQNLVNSAR*LTMHPD
Trigger: ATCTGGATGCATTGTCAACAACCTGGCCGAGTTCAC...TAGGTTTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGGCAGGAGGCACATATTaGACTGTGAACGTATCATTG +
Preference number: 5 (lower is better)
Translates to: CLLQWLVCSTKSSGLHLVAGGTY*TVNVSL
Trigger: CAATGATACGTTCACAGTCAAATATGTGCCTCCTGC...CACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CTTCTCAGCCCCCTGAACAAGCTTGCATTTCTTAAGATTCTCCAATATGTCCCTTTGGCAATGTGGGCCTaGATGTGGTCACCCCCAACC +
Preference number: 5 (lower is better)
Translates to: LLSPLNKLAFLKILQYVPLAMWA*MWSPPT
Trigger: GGTTGGGGGTGACCACATCAAGGCCCACATTGCCAA...AGGGACATATTGGAGAATCTTAAGAAATGCAAGCTTGTTCAGGGGGCTGAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTCAGTGACAGCCACCTaGAAGGGACTGTTTGGGATA +
Preference number: 5 (lower is better)
Translates to: AQVCRKAGKIPYTSFLDFSVTAT*KGLFGI
Trigger: TATCCCAAACAGTCCCTTCAAGGTGGCTGTCACTGA...GAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACACAGCTACCACGGTGAAGACATaGGGCTTGTTGGTAAAGGCC +
Preference number: 5 (lower is better)
Translates to: EGRQNSLHLISGFLHHTATTVKT*GLLVKA
Trigger: GGCCTTTACCAACAAGCCCAATGTCTTCACCGTGGT...AGCTGTGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TCATTCCAAAGCCAGCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCTGCAGCTGCCATCCTaGTTGTCTCTGCAATTTATC +
Preference number: 5 (lower is better)
Translates to: SFQSQLRSAGRQAKFPTPLQLPS*LSLQFI
Trigger: GATAAATTGCAGAGACAACAAGGATGGCAGCTGCAG...AGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGGAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp AGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCTGTGTGCCATCTCCATaGTCCACCACGTTCACTGGC +
Preference number: 5 (lower is better)
Translates to: SHLLCQMTTKLGVPFFSACVPSP*STTFTG
Trigger: GCCAGTGAACGTGGTGGACAATGGAGATGGCACACA...GGCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp ACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCATTCCAAAGCCCACTGGCAGTCACTTaGCTGGCATCATATGTGGGA +
Preference number: 5 (lower is better)
Translates to: TTHLGSGNVPDTLTSFQSPLAVT*LASYVG
Trigger: TCCCACATATGATGCCAGCAAAGTGACTGCCAGTGG...GCTTTGGAATGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CCCTCTGAGATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCCCACTGGCAGTCACTTaGCTGGCATCATATGTGGGA +
Preference number: 5 (lower is better)
Translates to: PSEITLNILVRLPRLMKGPLAVT*LASYVG
Trigger: TCCCACATATGATGCCAGCAAAGTGACTGCCAGTGG...GCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGATCTCAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAAACCTACATCTCGGGCATCAATaGCAAAGTCCACAGGTAGAC +
Preference number: 5 (lower is better)
Translates to: YYTCHKSGHFLRTKQQNLHLGHQ*QSPQVD
Trigger: GTCTACCTGTGGACTTTGCAATTGATGCCCGAGATG...TAGGTTTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TCCCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACATGGCTGCCCATGTATTaGATGTGCATCTCATGGAGC +
Preference number: 5 (lower is better)
Translates to: SQLSGQRPAGVSFCPVCTWLPMY*MCISWS
Trigger: GCTCCATGAGATGCACATCAAATACATGGGCAGCCA...TGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAAACCTATGGCTGCCCATGTATTaGATGTGCATCTCATGGAGC +
Preference number: 5 (lower is better)
Translates to: YYTCHKSGHFLRTKQQNLWLPMY*MCISWS
Trigger: GCTCCATGAGATGCACATCAAATACATGGGCAGCCA...TAGGTTTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCAGGGATGTGCTTGTCATaGTACTTGACCAGAATGCTG +
Preference number: 5 (lower is better)
Translates to: PDHTTHLGSGNVPDTLTSGMCLS*YLTRML
Trigger: CAGCATTCTGGTCAAGTACAATGACAAGCACATCCC...TGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp AGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCGAGATGCCAATGTGGTaGTTGGGCAGCCTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: SHLLCQMTTKLGVPFFSAEMPMW*LGSLFR
Trigger: CCTGAAGAGGCTGCCCAACAACCACATTGGCATCTC...GGCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp ATTCTCCAATATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTGTCTGGATGTCCACTTaGCTGGGGCCTTCCACCGCC +
Preference number: 5 (lower is better)
Translates to: ILQYVPQESSLGLISEGIVWMST*LGPSTA
Trigger: GGCGGTGGAAGGCCCCAGCAAAGTGGACATCCAGAC...AATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATATTGGAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GGAAACTGCTCGCCACTGCAGAATTTCTTCAGACCAAGGAAGGGACTGAAACGGCAATCCATTTTAACCTaGGATGGGCCTTCGATGGTG +
Preference number: 5 (lower is better)
Translates to: GNCSPLQNFFRPRKGLKRQSILT*DGPSMV
Trigger: CACCATCGAAGGCCCATCCAAGGTTAAAATGGATTG...CCGTTTCAGTCCCTTCCTTGGTCTGAAGAAATTCTGCAGTGGCGAGCAGTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAAACCTAGGGGTGTACATGACTTaGTACCCTTCAGGTGTTTCC +
Preference number: 5 (lower is better)
Translates to: YYTCHKSGHFLRTKQQNLGVYMT*YPSGVS
Trigger: GGAAACACCTGAAGGGTACAAAGTCATGTACACCCC...TAGGTTTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGATCTTCGGGGTGTACATGACTTaGTACCCTTCAGGTGTTTCC +
Preference number: 5 (lower is better)
Translates to: AGLFHQEFWFAPSVLRIFGVYMT*YPSGVS
Trigger: GGAAACACCTGAAGGGTACAAAGTCATGTACACCCC...GAAGATCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CCAGAAAAAGTGACCCATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATACCAAGAGTTCTGGTTaGCACCTAGTGTACTCAGGA +
Preference number: 5 (lower is better)
Translates to: PEKVTHEVGWGGCGVLCHTKSSG*HLVYSG
Trigger: TCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGT...ATGACATAACACTCCACACCCGCCCCAGCCAACTTCATGGGTCACTTTTTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACACAGCTGCGTTTGATTCCAGTTaGGCTTCCGTGTCCCAGCTT +
Preference number: 5 (lower is better)
Translates to: EGRQNSLHLISGFLHHTAAFDSS*ASVSQL
Trigger: AAGCTGGGACACGGAAGCCAAACTGGAATCAAACGC...AGCTGTGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TCATTCCAAAGCCAGCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTATTTACAGTCGGCGTTaGATTCCAGTTTGGCTTCCG +
Preference number: 5 (lower is better)
Translates to: SFQSQLRSAGRQAKFPTPIYSRR*IPVWLP
Trigger: CGGAAGCCAAACTGGAATCAAACGCCGACTGTAAAT...AGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGGAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS TCA 90 bp CCCAGAGGTTCTGGTATGTACCACATGGACACCAAGATATCTCAATaGGTTATCACCTCCAAACCCCACCATCTGCCACATCCAGAGCAA +
Preference number: 5 (lower is better)
Translates to: PRGSGMYHMDTKISQ*VITSKPHHLPHPEQ
Trigger: TTGCTCTGGATGTGGCAGATGGTGGGGTTTGGAGGTGATAACTCATTGAGATATCTTGGTGTCCATGTGGTACATACCAGAACCTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS TCA 90 bp AGCTATGCAGGGACATATCAGTCAGAAGGAAGATCTTTCAATGGCTaGGCTATGGCCTTTGGTCCAGGACTTCTCAAAGGCAATGGGCAG +
Preference number: 5 (lower is better)
Translates to: SYAGTYQSEGRSFNG*AMAFGPGLLKGNGQ
Trigger: CTGCCCATTGCCTTTGAGAAGTCCTGGACCAAAGGCCATAGCTCAGCCATTGAAAGATCTTCCTTCTGACTGATATGTCCCTGCATAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS TCA 90 bp CTGGGTTTACGAAGGACACAAACAAAATTGGTGCTCATTAAGGGGTaGACGAAGACCCTGGACAACTGGCATCTTGACGTCCACCTCTCT +
Preference number: 5 (lower is better)
Translates to: LGLRRTQTKLVLIKG*TKTLDNWHLDVHLS
Trigger: AGAGAGGTGGACGTCAAGATGCCAGTTGTCCAGGGTCTTCGTTCACCCCTTAATGAGCACCAATTTTGTTTGTGTCCTTCGTAAACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683925.1
CDS GCA 90 bp GGGTTCAACAAACGGCAGCTGTTACAGTTTCCACCAATAACAGCATaGTCGGGAGAAGGAATTTTCCTTACCATGACAGTGAAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: GFNKRQLLQFPPITA*SGEGIFLTMTVKGL
Trigger: CAGCCCCTTCACTGTCATGGTAAGGAAAATTCCTTCTCCCGAGCATGCTGTTATTGGTGGAAACTGTAACAGCTGCCGTTTGTTGAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS CCA 90 bp TGCATCATGTGCCTGGCATTCCCAGAGGTTCTGGTATGTACCACATaGACACCAAGATATCTCAATGAGTTATCACCTCCAAACCCCACC +
Preference number: 5 (lower is better)
Translates to: CIMCLAFPEVLVCTT*TPRYLNELSPPNPT
Trigger: GGTGGGGTTTGGAGGTGATAACTCATTGAGATATCTTGGTGTCCATGTGGTACATACCAGAACCTCTGGGAATGCCAGGCACATGATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS-3UTR CAA 90 bp CTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTACTTCAAATGGGCTCTaGGAGATGTGCTGTCCTGCA +
Preference number: 5 (lower is better)
Translates to: LRSAGRQAKFPTPHFWISTSNGL*EMCCPA
Trigger: TGCAGGACAGCACATCTCCAAGAGCCCATTTGAAGT...AGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCATCTCCCTGGGCCTaGTCAACACTCACTTCAAAT +
Preference number: 5 (lower is better)
Translates to: LRSAGRQAKFPTPHFWISASPWA*STLTSN
Trigger: ATTTGAAGTGAGTGTTGACAAGGCCCAGGGAGATGC...AGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CCCTCTGAGATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCGCATCTCCCTGGGCCTaGTCAACACTCACTTCAAAT +
Preference number: 5 (lower is better)
Translates to: PSEITLNILVRLPRLMKGASPWA*STLTSN
Trigger: ATTTGAAGTGAGTGTTGACAAGGCCCAGGGAGATGC...GCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGATCTCAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CACTTTAACCTCATTCCAAAGCCAGCTCAGGTCTGCAGGAAGGCAGGCAAAATTGCATCTCCCTGGGCCTaGTCAACACTCACTTCAAAT +
Preference number: 5 (lower is better)
Translates to: HFNLIPKPAQVCRKAGKIASPWA*STLTSN
Trigger: ATTTGAAGTGAGTGTTGACAAGGCCCAGGGAGATGC...AATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGGAATGAGGTTAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACACGTTGTACTCAATCTTaGCCTGAGAGGGGCCTTCAA +
Preference number: 5 (lower is better)
Translates to: CRKAGKIPYTSFLDFCTTRCTQS*PERGLQ
Trigger: TTGAAGGCCCCTCTCAGGCAAAGATTGAGTACAACG...TGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp AAGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCTGAGGATGGCTACCTaGCCCGATGTTGACCCTGTA +
Preference number: 5 (lower is better)
Translates to: KSSPLPNDNQTRCPLFLCLRMAT*PDVDPV
Trigger: TACAGGGTCAACATCGGGCAAGGTAGCCATCCTCAG...GCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGAGATGCAAAGAGAACTTaGATAGTGTATCGCCCAGCA +
Preference number: 5 (lower is better)
Translates to: QWLVCSTKSSGLHLVYSGDAKRT*IVYRPA
Trigger: TGCTGGGCGATACACTATCAAAGTTCTCTTTGCATC...TCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp ATTCTCCAATATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTCTGTTGAACTGCACGTaGAGCGGGGCTTTCCCAGCC +
Preference number: 5 (lower is better)
Translates to: ILQYVPQESSLGLISEGILLNCT*SGAFPA
Trigger: GGCTGGGAAAGCCCCGCTCAACGTGCAGTTCAACAG...AATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATATTGGAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp AAGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCAGTACTCCCCGGGTTTaGTGGGAAGGTAAGAGACGG +
Preference number: 5 (lower is better)
Translates to: KSSPLPNDNQTRCPLFLCSTPRV*WEGKRR
Trigger: CCGTCTCTTACCTTCCCACAAAACCCGGGGAGTACT...GCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCATCTTCAAAGAGGATGTaGACGAAGTACTCCCCGGGT +
Preference number: 5 (lower is better)
Translates to: SAGRQAKFPTPHFWISAPSSKRM*TKYSPG
Trigger: ACCCGGGGAGTACTTCGTCAACATCCTCTTTGAAGA...TGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCCATTTCAATCCAGGTCCTaGGGCTTGCACCCTAGATGG +
Preference number: 5 (lower is better)
Translates to: SSPLPNDNQTRCPLFLCPFQSRS*GLHPRW
Trigger: CCATCTAGGGTGCAAGCCCAAGGACCTGGATTGAAA...TGGGCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGACTGCAGCTGCCATCCTaGTTGTCTCTGCAATTTATC +
Preference number: 5 (lower is better)
Translates to: PTFRPKTRRSFILSCLYRLQLPS*LSLQFI
Trigger: GATAAATTGCAGAGACAACAAGGATGGCAGCTGCAG...TCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp AAGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCTGTGTGCCATCTCCATaGTCCACCACGTTCACTGGC +
Preference number: 5 (lower is better)
Translates to: KSSPLPNDNQTRCPLFLCCVPSP*STTFTG
Trigger: GCCAGTGAACGTGGTGGACAATGGAGATGGCACACA...GCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TCCCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACATTCTTGGTCCGTTATTaGAACAGCAAGCAGGCCTTC +
Preference number: 5 (lower is better)
Translates to: SQLSGQRPAGVSFCPVCTFLVRY*NSKQAF
Trigger: GAAGGCCTGCTTGCTGTTCAAATAACGGACCAAGAA...TGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGGACAATGGCTCTTTaGGGTTTTCCTTCTTGGTCC +
Preference number: 5 (lower is better)
Translates to: AQVCRKAGKIPYTSFLDFWTMAL*GFPSWS
Trigger: GGACCAAGAAGGAAAACCCAAAAGAGCCATTGTCCA...GAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACATGGCTGCCCATGTATTaGATGTGCATCTCATGGAGC +
Preference number: 5 (lower is better)
Translates to: CRKAGKIPYTSFLDFCTTWLPMY*MCISWS
Trigger: GCTCCATGAGATGCACATCAAATACATGGGCAGCCA...TGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TCATTCCAAAGCCAGCTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTTGGTTGCCATTTTTCTaGATGCTGACCAGATGTTCG +
Preference number: 5 (lower is better)
Translates to: SFQSQLRSAGRQAKFPTPWLPFF*MLTRCS
Trigger: CGAACATCTGGTCAGCATCAAGAAAAATGGCAACCA...AGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGGAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTACTCAGGATCTTCGAAATGTCAGTCTCATaGTGTTCCTGGTCTGTCTGC +
Preference number: 5 (lower is better)
Translates to: AGLFHQEFWFAPSVLRIFEMSVS*CSWSVC
Trigger: GCAGACAGACCAGGAACACAATGAGACTGACATTTC...GAAGATCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS TCA 90 bp GACCTTGAAGGGACTGCGAGGAATCTCTTCATCAGCATATTTAACTaGGACCATGTAAGGTCCCTCCTGAGATGGGGTGTAGGTTACTGT +
Preference number: 5 (lower is better)
Translates to: DLEGTARNLFISIFN*DHVRSLLRWGVGYC
Trigger: ACAGTAACCTACACCCCATCTCAGGAGGGACCTTACATGGTCTCAGTTAAATATGCTGATGAAGAGATTCCTCGCAGTCCCTTCAAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000481470.5
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CCA 90 bp ATTAAAAACAGAGGGAGGTTTGCTTTGTTCAGAAGGTCAGGATACTaGGCGCTCTGGCGGCCAAGCACAGATACCTTTTCATTCCATGCA +
Preference number: 5 (lower is better)
Translates to: IKNRGRFALFRRSGY*ALWRPSTDTFSFHA
Trigger: TGCATGGAATGAAAAGGTATCTGTGCTTGGCCGCCAGAGCGCCCAGTATCCTGACCTTCTGAACAAAGCAAACCTCCCTCTGTTTTTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419752.4
ENST00000484981.1
CDS CCA 90 bp CAGAGGAAGGCCTATTTACCCATGTTAACTGCTTTGTGTGTATCTTaGGATCTGCAGAAAGGCAAAGGCAGCTCTGTGAGCGACATTTGG +
Preference number: 5 (lower is better)
Translates to: QRKAYLPMLTALCVS*DLQKGKGSSVSDIW
Trigger: CCAAATGTCGCTCACAGAGCTGCCTTTGCCTTTCTGCAGATCCCAAGATACACACAAAGCAGTTAACATGGGTAAATAGGCCTTCCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS CCA 90 bp TGCAGAAACACTTCCACTGTTGGGGTAGTTCACGTAGAACTGGAGTaGGCTCTCTGGGTTTACGAAGGACACAAACAAAATTGGTGCTCA +
Preference number: 5 (lower is better)
Translates to: CRNTSTVGVVHVELE*ALWVYEGHKQNWCS
Trigger: TGAGCACCAATTTTGTTTGTGTCCTTCGTAAACCCAGAGAGCCCACTCCAGTTCTACGTGAACTACCCCAACAGTGGAAGTGTTTCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683925.1
CDS-3UTR CAA 90 bp CACTTTAACCTCATTCCAAAGCCAGCTCAGGTCTGCAGGAAGGCAGGCAAAATTGAGTATGTCTTGTTCTaGTCACTGTCAGGGGTCACT +
Preference number: 5 (lower is better)
Translates to: HFNLIPKPAQVCRKAGKIEYVLF*SLSGVT
Trigger: AGTGACCCCTGACAGTGACAAGAACAAGACATACTC...AATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGGAATGAGGTTAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACACAGCTTCCACAGAGTATGTCTaGTTCTTGTCACTGTCAGGG +
Preference number: 5 (lower is better)
Translates to: EGRQNSLHLISGFLHHTASTEYV*FLSLSG
Trigger: CCCTGACAGTGACAAGAACAAGACATACTCTGTGGA...AGCTGTGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp ACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCATTCCAAAGCTCCTTGGGCCAGTATTaGACATCACACGATCCATCA +
Preference number: 5 (lower is better)
Translates to: TTHLGSGNVPDTLTSFQSSLGQY*TSHDPS
Trigger: TGATGGATCGTGTGATGTCAAATACTGGCCCAAGGA...GCTTTGGAATGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CACTTTAACCTCATTCCAAAGCCAGCTCAGGTCTGCAGGAAGGCAGGCAAAATTAACTCGGCCAGGTTGTaGACAATGCATCCAGATTTC +
Preference number: 5 (lower is better)
Translates to: HFNLIPKPAQVCRKAGKINSARL*TMHPDF
Trigger: GAAATCTGGATGCATTGTCAACAACCTGGCCGAGTT...AATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGGAATGAGGTTAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp ATTCTCCAATATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTACAGCAATGGTGTGCTaGATGGCCTTCACCGGGGTG +
Preference number: 5 (lower is better)
Translates to: ILQYVPQESSLGLISEGITAMVC*MAFTGV
Trigger: CACCCCGGTGAAGGCCATCAAGCACACCATTGCTGT...AATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATATTGGAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAATGGGAAGGGTCAACTTaGACTCTGAAAGGGCTGGCG +
Preference number: 5 (lower is better)
Translates to: DPQEFHSVLSVQIIIFQKWEGST*TLKGLA
Trigger: CGCCAGCCCTTTCAGAGTCAAAGTTGACCCTTCCCA...TTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CTCAGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTCTGCATGTTGCCCTGTaGGGTGGGTGTATATTTAAC +
Preference number: 5 (lower is better)
Translates to: LRSAGRQAKFPTPHFWISLHVAL*GGCIFN
Trigger: GTTAAATATACACCCACCCAACAGGGCAACATGCAG...AGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp AGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCATTGAGTTTTATCTaGCTCAGATCCAGCGGTGCA +
Preference number: 5 (lower is better)
Translates to: RSAGRQAKFPTPHFWISAPLSFI*LRSSGA
Trigger: TGCACCGCTGGATCTGAGCAAGATAAAACTCAATGG...TGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CCAGATACTACACCTGCCACAAGAGTGGCCACTTCCTCAGGACTAAGCAGCAAACTGTTTTCCAGCCCATaGAGTTTTATCTTGCTCAGA +
Preference number: 5 (lower is better)
Translates to: PDTTPATRVATSSGLSSKLFSSP*SFILLR
Trigger: TCTGAGCAAGATAAAACTCAATGGGCTGGAAAACAG...TTTGCTGCTTAGTCCTGAGGAAGTGGCCACTCTTGTGGCAGGTGTAGTATCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CACTTTAACCTCATTCCAAAGCCAGCTCAGGTCTGCAGGAAGGCAGGCAAAATTGTGAAGACATTGGGCTaGTTGGTAAAGGCCTCTTTC +
Preference number: 5 (lower is better)
Translates to: HFNLIPKPAQVCRKAGKIVKTLG*LVKASF
Trigger: GAAAGAGGCCTTTACCAACAAGCCCAATGTCTTCAC...AATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGGAATGAGGTTAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp AGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACTGCAGCTGCCATCCTaGTTGTCTCTGCAATTTATC +
Preference number: 5 (lower is better)
Translates to: RSAGRQAKFPTPHFWISALQLPS*LSLQFI
Trigger: GATAAATTGCAGAGACAACAAGGATGGCAGCTGCAG...TGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp ACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCATTCCAAAGCTTCTTGGTCCGTTATTaGAACAGCAAGCAGGCCTTC +
Preference number: 5 (lower is better)
Translates to: TTHLGSGNVPDTLTSFQSFLVRY*NSKQAF
Trigger: GAAGGCCTGCTTGCTGTTCAAATAACGGACCAAGAA...GCTTTGGAATGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CCAGACCACACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCATACGTGCCATCTTTATaGTCATGGACAATGGCTCTT +
Preference number: 5 (lower is better)
Translates to: PDHTTHLGSGNVPDTLTSYVPSL*SWTMAL
Trigger: AAGAGCCATTGTCCATGACAATAAAGATGGCACGTA...TGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGTGTGGTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CCAGAAAAAGTGACCCATGAAGTTGGCTGGGGCGGGTGTGGAGTGTTATGTCATTACGTGCCATCTTTATaGTCATGGACAATGGCTCTT +
Preference number: 5 (lower is better)
Translates to: PEKVTHEVGWGGCGVLCHYVPSL*SWTMAL
Trigger: AAGAGCCATTGTCCATGACAATAAAGATGGCACGTA...ATGACATAACACTCCACACCCGCCCCAGCCAACTTCATGGGTCACTTTTTCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp AAGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCATGCCAATGTGGTTGTaGGGCAGCCTCTTCAGGAGA +
Preference number: 5 (lower is better)
Translates to: KSSPLPNDNQTRCPLFLCMPMWL*GSLFRR
Trigger: TCTCCTGAAGAGGCTGCCCAACAACCACATTGGCAT...GCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp AGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGTGACGTCTGGATGTCCACTTaGCTGGGGCCTTCCACCGCC +
Preference number: 5 (lower is better)
Translates to: RSFILSCLYRSLFSRKSDVWMST*LGPSTA
Trigger: GGCGGTGGAAGGCCCCAGCAAAGTGGACATCCAGAC...GTCACTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CCCTCTGAGATCACTTTAAACATTTTGGTAAGACTGCCCAGGCTGATGAAGGGCACCAAGAGTTCTGGTTaGCACCTAGTGTACTCAGGA +
Preference number: 5 (lower is better)
Translates to: PSEITLNILVRLPRLMKGTKSSG*HLVYSG
Trigger: TCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGT...GCCCTTCATCAGCCTGGGCAGTCTTACCAAAATGTTTAAAGTGATCTCAGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GTGGTCCTTTCACATCAGGCTCCGGGCTGTTCCACTTTCTGTAGGGTGGGCTTTTTTAAGTCATCTCCTTaGCCAAATGACAACCAAACT +
Preference number: 5 (lower is better)
Translates to: VVLSHQAPGCSTFCRVGFFKSSP*PNDNQT
Trigger: AGTTTGGTTGTCATTTGGCAAAGGAGATGACTTAAA...AAAGCCCACCCTACAGAAAGTGGAACAGCCCGGAGCCTGATGTGAAAGGACCAC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CTTCTCAGCCCCCTGAACAAGCTTGCATTTCTTAAGATTCTCCAATATGTCCCTGCGTTTGATTCCAGTTaGGCTTCCGTGTCCCAGCTT +
Preference number: 5 (lower is better)
Translates to: LLSPLNKLAFLKILQYVPAFDSS*ASVSQL
Trigger: AAGCTGGGACACGGAAGCCAAACTGGAATCAAACGC...AGGGACATATTGGAGAATCTTAAGAAATGCAAGCTTGTTCAGGGGGCTGAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS TCA 90 bp AGGCACAATACCCACATAAGGTTTCTGCCCTCAAGGTCTCCTGAATaGATCAATGCTGGTATCAGAGGCAACTGCAAATGTACAGCAGCA +
Preference number: 5 (lower is better)
Translates to: RHNTHIRFLPSRSPE*INAGIRGNCKCTAA
Trigger: TGCTGCTGTACATTTGCAGTTGCCTCTGATACCAGCATTGATTCATTCAGGAGACCTTGAGGGCAGAAACCTTATGTGGGTATTGTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682987.1
ENST00000683511.1
CDS TCA 90 bp TTCCTTCTTGGTCCTGCGAGGAATCTCTTCATCAGCATATTTAACTaGGACCATGTAAGGTCCCTCCTGAGATGGGGTGTAGGTTACTGT +
Preference number: 5 (lower is better)
Translates to: FLLGPARNLFISIFN*DHVRSLLRWGVGYC
Trigger: ACAGTAACCTACACCCCATCTCAGGAGGGACCTTACATGGTCTCAGTTAAATATGCTGATGAAGAGATTCCTCGCAGGACCAAGAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682297.1
CDS CCA 90 bp TGGACCTGCTCGGGTGGTGTTAATAAAGAATTCCGACTGGATACCTaGGAGAAAGGAATAGAAAATGCTGTGTTGATGACTTGGAGGGCT +
Preference number: 5 (lower is better)
Translates to: WTCSGGVNKEFRLDT*EKGIENAVLMTWRA
Trigger: AGCCCTCCAAGTCATCAACACAGCATTTTCTATTCCTTTCTCCCAGGTATCCAGTCGGAATTCTTTATTAACACCACCCGAGCAGGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS-3UTR CAA 90 bp CTTCTCAGCCCCCTGAACAAGCTTGCATTTCTTAAGATTCTCCAATATGTCCCTTATTCGCCAGGCTCCTaGGGCCAGTATTTGACATCA +
Preference number: 5 (lower is better)
Translates to: LLSPLNKLAFLKILQYVPYSPGS*GQYLTS
Trigger: TGATGTCAAATACTGGCCCAAGGAGCCTGGCGAATA...AGGGACATATTGGAGAATCTTAAGAAATGCAAGCTTGTTCAGGGGGCTGAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCACCACAGATGCAAAGAGAACTTaGATAGTGTATCGCCCAGCA +
Preference number: 5 (lower is better)
Translates to: CRKAGKIPYTSFLDFCTTDAKRT*IVYRPA
Trigger: TGCTGGGCGATACACTATCAAAGTTCTCTTTGCATC...TGTGGTGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAACAGGTCCCATCACCATaGTCGGAGCACTCGATTTTG +
Preference number: 5 (lower is better)
Translates to: DPQEFHSVLSVQIIIFQKQVPSP*SEHSIL
Trigger: CAAAATCGAGTGCTCCGACAATGGTGATGGGACCTG...TTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTTTACAACAGTGTGTGCCATCTCCATaGTCCACCACGTTCACTGGC +
Preference number: 5 (lower is better)
Translates to: YVPQESSLGLISEGILQQCVPSP*STTFTG
Trigger: GCCAGTGAACGTGGTGGACAATGGAGATGGCACACA...CTGTTGTAAAATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp ATTCTCCAATATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTGAGATGCCAATGTGGTaGTTGGGCAGCCTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: ILQYVPQESSLGLISEGIEMPMW*LGSLFR
Trigger: CCTGAAGAGGCTGCCCAACAACCACATTGGCATCTC...AATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATATTGGAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp ACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCATTCCAAAGCTGGTTGCCATTTTTCTaGATGCTGACCAGATGTTCG +
Preference number: 5 (lower is better)
Translates to: TTHLGSGNVPDTLTSFQSWLPFF*MLTRCS
Trigger: CGAACATCTGGTCAGCATCAAGAAAAATGGCAACCA...GCTTTGGAATGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp AGGTCTGCAGGAAGGCAGGCAAAATTCCCTACACCTCATTTCTGGATTTCTGCATGGTTGCCATTTTTCTaGATGCTGACCAGATGTTCG +
Preference number: 5 (lower is better)
Translates to: RSAGRQAKFPTPHFWISAWLPFF*MLTRCS
Trigger: CGAACATCTGGTCAGCATCAAGAAAAATGGCAACCA...TGCAGAAATCCAGAAATGAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CCAACTTTCAGGCCAAAGACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGAGACATATCACTGCTGTaGATTTCTGGGATTTTCAGG +
Preference number: 5 (lower is better)
Translates to: PTFRPKTRRSFILSCLYRDISLL*ISGIFR
Trigger: CCTGAAAATCCCAGAAATCAACAGCAGTGATATGTC...TCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTCTTTGGCCTGAAAGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp ACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCATTCCAAAGCGTAGTTACCAGGCTCTaGGGCAATATAAGATACACC +
Preference number: 5 (lower is better)
Translates to: TTHLGSGNVPDTLTSFQSVVTRL*GNIRYT
Trigger: GGTGTATCTTATATTGCCCAAGAGCCTGGTAACTAC...GCTTTGGAATGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp AGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGTGACTCCCCAACGCGCACTTaGAAGGGGCTTCCAACCACG +
Preference number: 5 (lower is better)
Translates to: RSFILSCLYRSLFSRKSDSPTRT*KGLPTT
Trigger: CGTGGTTGGAAGCCCCTTCAAAGTGCGCGTTGGGGA...GTCACTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TGTCTGCTGCAGTGGCTGGTCTGTTCCACCAAGAGTTCTGGTTTGCACCTAGTGTTTAAGTCATCTCCTTaGCCAAATGACAACCAAACT +
Preference number: 5 (lower is better)
Translates to: CLLQWLVCSTKSSGLHLVFKSSP*PNDNQT
Trigger: AGTTTGGTTGTCATTTGGCAAAGGAGATGACTTAAA...CACTAGGTGCAAACCAGAACTCTTGGTGGAACAGACCAGCCACTGCAGCAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS TCA 90 bp ATAGAAAGAACTTGGAACACATTTCAGACAGACTGTGTGACCTGTTaGCTGGCTAATCGGGGCCCAAGAAGAACAATTCACCACCAAAGG +
Preference number: 5 (lower is better)
Translates to: IERTWNTFQTDCVTC*LANRGPRRTIHHQR
Trigger: CCTTTGGTGGTGAATTGTTCTTCTTGGGCCCCGATTAGCCAGTCAACAGGTCACACAGTCTGTCTGAAATGTGTTCCAAGTTCTTTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477629.1
CDS TCA 90 bp AAAACCATGCCCAAACTAACCCATGCTCCCTGCCTTATTCTGAGTTaGCCTAAAGAACTTCTAACAACTGGGGCAGAGACCTCTAGTCAT +
Preference number: 5 (lower is better)
Translates to: KTMPKLTHAPCLILS*PKELLTTGAETSSH
Trigger: ATGACTAGAGGTCTCTGCCCCAGTTGTTAGAAGTTCTTTAGGTCAACTCAGAATAAGGCAGGGAGCATGGGTTAGTTTGGGCATGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682097.1
CDS GCA 90 bp TTAATTGATGTGTGTAAGGACCTTGACTGGTGCTGTCTGTGGTCGTaGAAAACTAAAGCAACCCAATGTCCATCTGGAAGGGATTTGGTC +
Preference number: 5 (lower is better)
Translates to: LIDVCKDLDWCCLWS*KTKATQCPSGRDLV
Trigger: GACCAAATCCCTTCCAGATGGACATTGGGTTGCTTTAGTTTTGCACGACCACAGACAGCACCAGTCAAGGTCCTTACACACATCAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684439.1
CDS CCA 90 bp TACTTGGCTGTTACCTCCTCTACAGCTCCAAACAAGCCTATTAGGTaGGTCCTGTTATTAATCCTGTTTTACAGGAAAGGAAGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: YLAVTSSTAPNKPIR*VLLLILFYRKGSRG
Trigger: GCCTCTGCTTCCTTTCCTGTAAAACAGGATTAATAACAGGACCCACCTAATAGGCTTGTTTGGAGCTGTAGAGGAGGTAACAGCCAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS-3UTR CAA 90 bp TATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTTTACAACAGCCATCCACAATGGCTTaGCTATCGATGGACACGAGC +
Preference number: 5 (lower is better)
Translates to: YVPQESSLGLISEGILQQPSTMA*LSMDTS
Trigger: GCTCGTGTCCATCGATAGCAAAGCCATTGTGGATGG...CTGTTGTAAAATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp AAGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCTCCACAGAGTATGTCTaGTTCTTGTCACTGTCAGGG +
Preference number: 5 (lower is better)
Translates to: KSSPLPNDNQTRCPLFLCSTEYV*FLSLSG
Trigger: CCCTGACAGTGACAAGAACAAGACATACTCTGTGGA...GCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGACCACGGTGAAGACATaGGGCTTGTTGGTAAAGGCC +
Preference number: 5 (lower is better)
Translates to: PQEFHSVLSVQIIIFQKKTTVKT*GLLVKA
Trigger: GGCCTTTACCAACAAGCCCAATGTCTTCACCGTGGT...CTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp ATTCTCCAATATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTTATGTGGGAAGGACCTaGACCTTGAAGGGACTGCGA +
Preference number: 5 (lower is better)
Translates to: ILQYVPQESSLGLISEGIYVGRT*TLKGLR
Trigger: TCGCAGTCCCTTCAAGGTCAAGGTCCTTCCCACATA...AATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATATTGGAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp ACTACACATTTGGGCTCAGGCAACGTCCCTGACACTTTAACCTCATTCCAAAGCTTTGGGTTTTCCTTCTaGGTCCGTTATTTGAACAGC +
Preference number: 5 (lower is better)
Translates to: TTHLGSGNVPDTLTSFQSFGFSF*VRYLNS
Trigger: GCTGTTCAAATAACGGACCAAGAAGGAAAACCCAAA...GCTTTGGAATGAGGTTAAAGTGTCAGGGACGTTGCCTGAGCCCAAATGTGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGATGCCAATGTGGTTGTaGGGCAGCCTCTTCAGGAGA +
Preference number: 5 (lower is better)
Translates to: PQEFHSVLSVQIIIFQKKMPMWL*GSLFRR
Trigger: TCTCCTGAAGAGGCTGCCCAACAACCACATTGGCAT...CTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CACTTTAACCTCATTCCAAAGCCAGCTCAGGTCTGCAGGAAGGCAGGCAAAATTGACATATCACTGCTGTaGATTTCTGGGATTTTCAGG +
Preference number: 5 (lower is better)
Translates to: HFNLIPKPAQVCRKAGKIDISLL*ISGIFR
Trigger: CCTGAAAATCCCAGAAATCAACAGCAGTGATATGTC...AATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGGAATGAGGTTAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAGGGGCTGTGCACCTTaGCATCAATCTTGCCTTTTG +
Preference number: 5 (lower is better)
Translates to: DPQEFHSVLSVQIIIFQKRGCAP*HQSCLL
Trigger: CAAAAGGCAAGATTGATGCAAAGGTGCACAGCCCCT...TTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp AAGTCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCACCAAGAGTTCTGGTTaGCACCTAGTGTACTCAGGA +
Preference number: 5 (lower is better)
Translates to: KSSPLPNDNQTRCPLFLCTKSSG*HLVYSG
Trigger: TCCTGAGTACACTAGGTGCAAACCAGAACTCTTGGT...GCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS CCA 90 bp ACAGAGTATAGACTGTTCGGAAGAAAGTCCCTGAGCTTTGGAGTTTaGAATGGAGTCTTCATGCACCTCTCCATTGCTGCACAAAATGAA +
Preference number: 5 (lower is better)
Translates to: TEYRLFGRKSLSFGV*NGVFMHLSIAAQNE
Trigger: TTCATTTTGTGCAGCAATGGAGAGGTGCATGAAGACTCCATTCCAAACTCCAAAGCTCAGGGACTTTCTTCCGAACAGTCTATACTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS-3UTR CAA 90 bp TATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTTTACAACAGTCAGTGACAGCCACCTaGAAGGGACTGTTTGGGATA +
Preference number: 5 (lower is better)
Translates to: YVPQESSLGLISEGILQQSVTAT*KGLFGI
Trigger: TATCCCAAACAGTCCCTTCAAGGTGGCTGTCACTGA...CTGTTGTAAAATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TCATCTCCTTTGCCAAATGACAACCAAACTAGGTGTCCCCTTTTTCTCTGCCCATACGTGCCATCTTTATaGTCATGGACAATGGCTCTT +
Preference number: 5 (lower is better)
Translates to: SSPLPNDNQTRCPLFLCPYVPSL*SWTMAL
Trigger: AAGAGCCATTGTCCATGACAATAAAGATGGCACGTA...TGGGCAGAGAAAAAGGGGACACCTAGTTTGGTTGTCATTTGGCAAAGGAGATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp GACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAGAAATGTCAGTCTCATaGTGTTCCTGGTCTGTCTGC +
Preference number: 5 (lower is better)
Translates to: DPQEFHSVLSVQIIIFQKEMSVS*CSWSVC
Trigger: GCAGACAGACCAGGAACACAATGAGACTGACATTTC...TTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS TCA 90 bp GAAAACAGAAAGAGATGCTTCATTTCCACAAAAGCTCTGCTCAGATaGCCATGGTCTTGGCCAATCAACCCAACATTCTTTGCTTGGAGA +
Preference number: 5 (lower is better)
Translates to: ENRKRCFISTKALLR*PWSWPINPTFFAWR
Trigger: TCTCCAAGCAAAGAATGTTGGGTTGATTGGCCAAGACCATGGTCATCTGAGCAGAGCTTTTGTGGAAATGAAGCATCTCTTTCTGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683114.1
CDS CCA 90 bp AAGACACAATATAACCTTTCAAGCTGGTTAGGCACGCTTAGGATGTaGCAATTTTACTCTACAGCTGAGACACTGCCAAAGAGTCCAGAA +
Preference number: 5 (lower is better)
Translates to: KTQYNLSSWLGTLRM*QFYSTAETLPKSPE
Trigger: TTCTGGACTCTTTGGCAGTGTCTCAGCTGTAGAGTAAAATTGCCACATCCTAAGCGTGCCTAACCAGCTTGAAAGGTTATATTGTGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481470.5
ENST00000682868.1
CDS CCA 90 bp GCCTCCAGATCTCTGGCATGCTGTTTACAGATAAACAGACGTCGATaGAAGGGAATAATACTACAACAGAGTATAGACTGTTCGGAAGAA +
Preference number: 5 (lower is better)
Translates to: ASRSLACCLQINRRR*KGIILQQSIDCSEE
Trigger: TTCTTCCGAACAGTCTATACTCTGTTGTAGTATTATTCCCTTCCATCGACGTCTGTTTATCTGTAAACAGCATGCCAGAGATCTGGAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS CCA 90 bp ATCTGGAAGGGATTTGGTCAAATAAATTCTGGTGAGTCTGTCCAGTaGAACATGGCAGTCAGGTCCAATGAATCAATATGTAAGGGTACC +
Preference number: 5 (lower is better)
Translates to: IWKGFGQINSGESVQ*NMAVRSNESICKGT
Trigger: GGTACCCTTACATATTGATTCATTGGACCTGACTGCCATGTTCCACTGGACAGACTCACCAGAATTTATTTGACCAAATCCCTTCCAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684439.1
CDS-3UTR CAA 90 bp GACCCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAGCAGGAGGCACATATTaGACTGTGAACGTATCATTG +
Preference number: 5 (lower is better)
Translates to: DPQEFHSVLSVQIIIFQKAGGTY*TVNVSL
Trigger: CAATGATACGTTCACAGTCAAATATGTGCCTCCTGC...TTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp CCGCAGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGATTTACAGTCGGCGTTaGATTCCAGTTTGGCTTCCG +
Preference number: 5 (lower is better)
Translates to: PQEFHSVLSVQIIIFQKKIYSRR*IPVWLP
Trigger: CGGAAGCCAAACTGGAATCAAACGCCGACTGTAAAT...CTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCTGCGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS TCA 90 bp GCAGCAGGAGGCACATATTTGACTGTGAACGTATCATTGGCATTGTaGATAATGTCAAAATCCACGTCTTCCTCATCTTCACTTAACACC +
Preference number: 5 (lower is better)
Translates to: AAGGTYLTVNVSLAL*IMSKSTSSSSSLNT
Trigger: GGTGTTAAGTGAAGATGAGGAAGACGTGGATTTTGACATTATTCACAATGCCAATGATACGTTCACAGTCAAATATGTGCCTCCTGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS GCA 90 bp CTCAAAGAGAAAACAGAAAGAGATGCTTCATTTCCACAAAAGCTCTaGTCAGATGACCATGGTCTTGGCCAATCAACCCAACATTCTTTG +
Preference number: 5 (lower is better)
Translates to: LKEKTERDASFPQKL*SDDHGLGQSTQHSL
Trigger: CAAAGAATGTTGGGTTGATTGGCCAAGACCATGGTCATCTGAGCAGAGCTTTTGTGGAAATGAAGCATCTCTTTCTGTTTTCTCTTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683114.1
CDS CCA 90 bp AGGCCACATCTGGCCCATTGCTTACTTTTGCAAATAAAGTTTTACTaGAACATGGCCACACACGTTTGTTTACGTATTCCTATAGCTGCT +
Preference number: 5 (lower is better)
Translates to: RPHLAHCLLLQIKFY*NMATHVCLRIPIAA
Trigger: AGCAGCTATAGGAATACGTAAACAAACGTGTGTGGCCATGTTCCAGTAAAACTTTATTTGCAAAAGTAAGCAATGGGCCAGATGTGGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000682987.1
ENST00000683511.1
CDS-3UTR CAA 90 bp AGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGTGACACTTCAAATGGGCTCTaGGAGATGTGCTGTCCTGCA +
Preference number: 5 (lower is better)
Translates to: RSFILSCLYRSLFSRKSDTSNGL*EMCCPA
Trigger: TGCAGGACAGCACATCTCCAAGAGCCCATTTGAAGT...GTCACTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp AGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGTGACGTGAACTCGGCCAGGTaGTTGACAATGCATCCAGAT +
Preference number: 5 (lower is better)
Translates to: RSFILSCLYRSLFSRKSDVNSAR*LTMHPD
Trigger: ATCTGGATGCATTGTCAACAACCTGGCCGAGTTCAC...GTCACTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp ATTCTCCAATATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTGTAGTTACCAGGCTCTaGGGCAATATAAGATACACC +
Preference number: 5 (lower is better)
Translates to: ILQYVPQESSLGLISEGIVVTRL*GNIRYT
Trigger: GGTGTATCTTATATTGCCCAAGAGCCTGGTAACTAC...AATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATATTGGAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp ATTCTCCAATATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTACCTTTGCATCAATCTaGCCTTTTGCGCCATTCAAC +
Preference number: 5 (lower is better)
Translates to: ILQYVPQESSLGLISEGITFASI*PFAPFN
Trigger: GTTGAATGGCGCAAAAGGCAAGATTGATGCAAAGGT...AATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATATTGGAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp AGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGTGACAGGGGCTGTGCACCTTaGCATCAATCTTGCCTTTTG +
Preference number: 5 (lower is better)
Translates to: RSFILSCLYRSLFSRKSDRGCAP*HQSCLL
Trigger: CAAAAGGCAAGATTGATGCAAAGGTGCACAGCCCCT...GTCACTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp AGGAGTTTCATTCTGTCCTGTCTGTACAGATCATTATTTTCCAGAAAAAGTGACTCCTTGGGCCAGTATTaGACATCACACGATCCATCA +
Preference number: 5 (lower is better)
Translates to: RSFILSCLYRSLFSRKSDSLGQY*TSHDPS
Trigger: TGATGGATCGTGTGATGTCAAATACTGGCCCAAGGA...GTCACTTTTTCTGGAAAATAATGATCTGTACAGACAGGACAGAATGAAACTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS-3UTR CAA 90 bp TATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTTTACAACAGCTGTTTTCCAGCCCATaGAGTTTTATCTTGCTCAGA +
Preference number: 5 (lower is better)
Translates to: YVPQESSLGLISEGILQQLFSSP*SFILLR
Trigger: TCTGAGCAAGATAAAACTCAATGGGCTGGAAAACAG...CTGTTGTAAAATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS TCA 90 bp GGGCTAAAAACAGATTCTGAAAACTACAACTGGTACCCTTCTCTGTaGATAAGGACATCAACTTCCCAGCTGTATTTCTTTCTTCCTACA +
Preference number: 5 (lower is better)
Translates to: GLKTDSENYNWYPSL*IRTSTSQLYFFLPT
Trigger: TGTAGGAAGAAAGAAATACAGCTGGGAAGTTGATGTCCTTATTCACAGAGAAGGGTACCAGTTGTAGTTTTCAGAATCTGTTTTTAGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS TCA 90 bp TATTCTTGCTTTGTGTGTATTCAGGGGCTAGAAGACACTTATTACTaGGTTTGGAAGCCTCCACTTCTGCAAAAAGGGTCCTCAATTTTT +
Preference number: 5 (lower is better)
Translates to: YSCFVCIQGLEDTYY*VWKPPLLQKGSSIF
Trigger: AAAAATTGAGGACCCTTTTTGCAGAAGTGGAGGCTTCCAAACTCAGTAATAAGTGTCTTCTAGCCCCTGAATACACACAAAGCAAGAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS TCA 90 bp AGTTGTGTGGTCTCATTCACAAGAGAAATACAAATAAAGCAACGCTaGGATTCTGTTTCTTTCCAACCATCAGACTGGCAAAGCTCCAAA +
Preference number: 5 (lower is better)
Translates to: SCVVSFTREIQIKQR*DSVSFQPSDWQSSK
Trigger: TTTGGAGCTTTGCCAGTCTGATGGTTGGAAAGAAACAGAATCTCAGCGTTGCTTTATTTGTATTTCTCTTGTGAATGAGACCACACAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683925.1
CDS GCA 90 bp ACATTTACATACTTGAGACATAAAAGAGCCTCCAGATCTCTGGCATaGTGTTTACAGATAAACAGACGTCGATGGAAGGGAATAATACTA +
Preference number: 5 (lower is better)
Translates to: TFTYLRHKRASRSLA*CLQINRRRWKGIIL
Trigger: TAGTATTATTCCCTTCCATCGACGTCTGTTTATCTGTAAACAGCATGCCAGAGATCTGGAGGCTCTTTTATGTCTCAAGTATGTAAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS-3UTR CAA 90 bp ATTCTCCAATATGTCCCTCAAGAGTCCAGTCTAGGACTTATTTCTGAAGGCATTTTTAAGTCATCTCCTTaGCCAAATGACAACCAAACT +
Preference number: 5 (lower is better)
Translates to: ILQYVPQESSLGLISEGIFKSSP*PNDNQT
Trigger: AGTTTGGTTGTCATTTGGCAAAGGAGATGACTTAAA...AATGCCTTCAGAAATAAGTCCTAGACTGGACTCTTGAGGGACATATTGGAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
CDS TCA 90 bp AATTTTCCTGCGATGAACCTACATTCTTTATGTAACAGTGAATCATaGCGTGTGGAAGGGATTTACTACAGTGTTTATGGTGGTTACCTT +
Preference number: 5 (lower is better)
Translates to: NFPAMNLHSLCNSES*RVEGIYYSVYGGYL
Trigger: AAGGTAACCACCATAAACACTGTAGTAAATCCCTTCCACACGTCATGATTCACTGTTACATAAAGAATGTAGGTTCATCGCAGGAAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481470.5
CDS CCA 90 bp AAAAGAATGTTGCAGACTATTGGAATAAAGGCAGAAGAGGTTAAATaGATGTCAAGACCACTACCTTTAGGCACAGAACATTCTACTAAG +
Preference number: 5 (lower is better)
Translates to: KRMLQTIGIKAEEVK*MSRPLPLGTEHSTK
Trigger: CTTAGTAGAATGTTCTGTGCCTAAAGGTAGTGGTCTTGACATCCATTTAACCTCTTCTGCCTTTATTCCAATAGTCTGCAACATTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684517.1
CDS GCA 90 bp TTAATTTTAATCCCTAGGATTTCAAAATTCTCTCTTTCAGGATCCTaGTCACCCTATCTTCACTATTGCATACCTGAAACTTCAAATCAC +
Preference number: 5 (lower is better)
Translates to: LILIPRISKFSLSGS*SPYLHYCIPETSNH
Trigger: GTGATTTGAAGTTTCAGGTATGCAATAGTGAAGATAGGGTGAGCAGGATCCTGAAAGAGAGAATTTTGAAATCCTAGGGATTAAAATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684517.1
CDS TCA 72 bp CCAGCGGAGCCAGGCCAGCCTTGCTGCTGTCCACCGTaGAGGACTGCAGGACACGGGCTCGGACGCCTGAGC +
Preference number: 6 (lower is better)
Translates to: PAEPGQPCCCPP*RTAGHGLGRLS
Trigger: GCTCAGGCGTCCGAGCCCGTGTCCTGCAGTCCTTCACGGTGGACAGCAGCAAGGCTGGCCTGGCTCCGCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CAA 90 bp CCTCGTGGGCCCAGAACCCTCACTTCCAGCGGAGCCAGGCCAGCCTaGCTGCTGTCCACCGTGAAGGACTGCAGGACACGGGCTCGGACG +
Preference number: 6 (lower is better)
Translates to: PRGPRTLTSSGARPA*LLSTVKDCRTRART
Trigger: CGTCCGAGCCCGTGTCCTGCAGTCCTTCACGGTGGACAGCAGCAAGGCTGGCCTGGCTCCGCTGGAAGTGAGGGTTCTGGGCCCACGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000493452.5
ENST00000682868.1
CDS CAA 90 bp GCTCGTGGGCCCAGAACCCTCACTTCCAGCGGAGCCAGGCCAGCCTaGCTGCTGTCCACCGTGAAGGACTGCAGGACACGGGCTCGGACG +
Preference number: 6 (lower is better)
Translates to: ARGPRTLTSSGARPA*LLSTVKDCRTRART
Trigger: CGTCCGAGCCCGTGTCCTGCAGTCCTTCACGGTGGACAGCAGCAAGGCTGGCCTGGCTCCGCTGGAAGTGAGGGTTCTGGGCCCACGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000490882.5
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS TCA 72 bp CACCGTGAAGGACTGCAGGACACGGGCTCGGACGCCTaGGCCCAGCCCGGGGCCGGCAATCTTGACCTTGCT +
Preference number: 6 (lower is better)
Translates to: HREGLQDTGSDA*AQPGAGNLDLA
Trigger: AGCAAGGTCAAGATTGCCGGCCCCGGGCTGGGCTCAGGCGTCCGAGCCCGTGTCCTGCAGTCCTTCACGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS GCA 72 bp GTGAGGCCTGGCCTGAAGCCTGCCACGCGCTCCAAGTaGCGAGAGGACCCCACCTGGGCCCTCAAAGGTGAG +
Preference number: 6 (lower is better)
Translates to: VRPGLKPATRSK*REDPTWALKGE
Trigger: CTCACCTTTGAGGGCCCAGGTGGGGTCCTCTCGGCACTTGGAGCGCGTGGCAGGCTTCAGGCCAGGCCTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CAA 90 bp TGCCTGGGGAGTCTGGCAGCACTCACACCACCCCTGTGGGTGGCTTaGCTGAGGCCACTGCTTTGGCCAGAGTCCCGGGCAGCCTGCCAG +
Preference number: 6 (lower is better)
Translates to: CLGSLAALTPPLWVA*LRPLLWPESRAACQ
Trigger: CTGGCAGGCTGCCCGGGACTCTGGCCAAAGCAGTGGCCTCAGCAAAGCCACCCACAGGGGTGGTGTGAGTGCTGCCAGACTCCCCAGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CAA 90 bp AAGGCAAGCCGCAGGCCCAGAGTTCAGCGTGGAGCCGGGCTGGATTaGCCTGGGGAGTCTGGCAGCACTCACACCACCCCTGTGGGTGGC +
Preference number: 6 (lower is better)
Translates to: KASRRPRVQRGAGLD*PGESGSTHTTPVGG
Trigger: GCCACCCACAGGGGTGGTGTGAGTGCTGCCAGACTCCCCAGGCAAATCCAGCCCGGCTCCACGCTGAACTCTGGGCCTGCGGCTTGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS GCA 72 bp CCGACTGGATACCTGTGGTGCCCCCTTCGAGTCCCGTaGCATAGGCGGACACCAGGGCAGGGTTCCCCGCTT +
Preference number: 6 (lower is better)
Translates to: PTGYLWCPLRVP*HRRTPGQGSPL
Trigger: AAGCGGGGAACCCTGCCCTGGTGTCCGCCTATGGCACGGGACTCGAAGGGGGCACCACAGGTATCCAGTCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000481470.5
ENST00000490882.5
ENST00000493452.5
ENST00000682297.1
ENST00000682503.1
ENST00000682871.1
ENST00000683114.1
ENST00000684439.1
ENST00000684506.1
ENST00000684607.1
CDS CCA 72 bp GCCCAGAGTTCAGCGTGGAGCCGGGCTGGATTTGCCTaGGGAGTCTGGCAGCACTCACACCACCCCTGTGGG +
Preference number: 6 (lower is better)
Translates to: AQSSAWSRAGFA*GVWQHSHHPCG
Trigger: CCCACAGGGGTGGTGTGAGTGCTGCCAGACTCCCCAGGCAAATCCAGCCCGGCTCCACGCTGAACTCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CCA 72 bp CTGCCCGTGTGGGCCAACAGTAGCACACGTGGCCTCTaGGGCCAACTCCCTGTCAGCCAGGCTGGCTCAGAC +
Preference number: 6 (lower is better)
Translates to: LPVWANSSTRGL*GQLPVSQAGSD
Trigger: GTCTGAGCCAGCCTGGCTGACAGGGAGTTGGCCCCAGAGGCCACGTGTGCTACTGTTGGCCCACACGGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682097.1
CDS CAA 72 bp CGCAGGCCCAGAGTTCAGCGTGGAGCCGGGCTGGATTaGCCTGGGGAGTCTGGCAGCACTCACACCACCCCT +
Preference number: 6 (lower is better)
Translates to: RRPRVQRGAGLD*PGESGSTHTTP
Trigger: AGGGGTGGTGTGAGTGCTGCCAGACTCCCCAGGCAAATCCAGCCCGGCTCCACGCTGAACTCTGGGCCTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS GCA 72 bp CACAGGAACAGAACAGCAGCTCCCGCTGACGGGGCATaGGTACCCCACTCCGGCTCCAGGTCCTGTGCACAG +
Preference number: 6 (lower is better)
Translates to: HRNRTAAPADGA*VPHSGSRSCAQ
Trigger: CTGTGCACAGGACCTGGAGCCGGAGTGGGGTACGCATGCCCCGTCAGCGGGAGCTGCTGTTCTGTTCCTGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS GCA 72 bp AGAGTGGGTTACCTGTGGTGCCCCCTTCGAGTCCCGTaGCATAGGCGGACACCAGGGCAGGGTTCCCCGCTT +
Preference number: 6 (lower is better)
Translates to: RVGYLWCPLRVP*HRRTPGQGSPL
Trigger: AAGCGGGGAACCCTGCCCTGGTGTCCGCCTATGGCACGGGACTCGAAGGGGGCACCACAGGTAACCCACTCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475487.1
CDS CCA 72 bp TCAGCGTGGAGCCGGGCTGGATTTGCCTGGGGAGTCTaGCAGCACTCACACCACCCCTGTGGGTGGCTTTGC +
Preference number: 6 (lower is better)
Translates to: SAWSRAGFAWGV*QHSHHPCGWLC
Trigger: GCAAAGCCACCCACAGGGGTGGTGTGAGTGCTGCCAGACTCCCCAGGCAAATCCAGCCCGGCTCCACGCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CCA 72 bp CAAGCCGCAGGCCCAGAGTTCAGCGTGGAGCCGGGCTaGATTTGCCTGGGGAGTCTGGCAGCACTCACACCA +
Preference number: 6 (lower is better)
Translates to: QAAGPEFSVEPG*ICLGSLAALTP
Trigger: TGGTGTGAGTGCTGCCAGACTCCCCAGGCAAATCCAGCCCGGCTCCACGCTGAACTCTGGGCCTGCGGCTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CAA 72 bp ACTTTGATCCTGCTGGTGTCCACGGCGGGCTCCACCTaGACCCGGGCGGGGAAGTGTGGCACGAGTTCGCCA +
Preference number: 6 (lower is better)
Translates to: TLILLVSTAGST*TRAGKCGTSSP
Trigger: TGGCGAACTCGTGCCACACTTCCCCGCCCGGGTCAAGGTGGAGCCCGCCGTGGACACCAGCAGGATCAAAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CAA 72 bp CCCAGAACCCTCACTTCCAGCGGAGCCAGGCCAGCCTaGCTGCTGTCCACCGTGAAGGACTGCAGGACACGG +
Preference number: 6 (lower is better)
Translates to: PRTLTSSGARPA*LLSTVKDCRTR
Trigger: CCGTGTCCTGCAGTCCTTCACGGTGGACAGCAGCAAGGCTGGCCTGGCTCCGCTGGAAGTGAGGGTTCTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS TCA 72 bp CTCGGACGCCTGAGCCCAGCCCGGGGCCGGCAATCTTaGCCTTGCTGGGGTCCACAACATCCTTCACAGGAA +
Preference number: 6 (lower is better)
Translates to: LGRLSPARGRQS*PCWGPQHPSQE
Trigger: TTCCTGTGAAGGATGTTGTGGACCCCAGCAAGGTCAAGATTGCCGGCCCCGGGCTGGGCTCAGGCGTCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS TCA 72 bp CAGCAACAAGCACAGGAACAGAACAGCAGCTCCCGCTaGCGGGGCATGCGTACCCCACTCCGGCTCCAGGTC +
Preference number: 6 (lower is better)
Translates to: QQQAQEQNSSSR*RGMRTPLRLQV
Trigger: GACCTGGAGCCGGAGTGGGGTACGCATGCCCCGTCAGCGGGAGCTGCTGTTCTGTTCCTGTGCTTGTTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS GCA 72 bp CAGTGGAGGCGATTCCAGGACCCGTGGCCAGGCACTTaGTGGCATCACCCGTCTGTGTGGCTCGGATGCGAT +
Preference number: 6 (lower is better)
Translates to: QWRRFQDPWPGT*WHHPSVWLGCD
Trigger: ATCGCATCCGAGCCACACAGACGGGTGATGCCAGCAAGTGCCTGGCCACGGGTCCTGGAATCGCCTCCACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000481470.5
ENST00000490882.5
ENST00000493452.5
ENST00000682297.1
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CCA 72 bp GAGGCCAGCTTCACCCACCTTCCCGTGCTCGAGACCTaGCCCCGATGCCACGACTTTAGAGGGGTCAAAGGG +
Preference number: 6 (lower is better)
Translates to: EASFTHLPVLET*PRCHDFRGVKG
Trigger: CCCTTTGACCCCTCTAAAGTCGTGGCATCGGGGCCAGGTCTCGAGCACGGGAAGGTGGGTGAAGCTGGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CCA 72 bp CACGGCGGGCTCCACCTTGACCCGGGCGGGGAAGTGTaGCACGAGTTCGCCACCATACTTCATGGTCAACGT +
Preference number: 6 (lower is better)
Translates to: HGGLHLDPGGEV*HEFATILHGQR
Trigger: ACGTTGACCATGAAGTATGGTGGCGAACTCGTGCCACACTTCCCCGCCCGGGTCAAGGTGGAGCCCGCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CCA 72 bp CAGCCTCTTCAGGAGACAGGGCTCGTCTCGGCCAGATaGGGCCTTAATGCTGGCCGTCAGGCTGCTGAGGTC +
Preference number: 6 (lower is better)
Translates to: QPLQETGLVSAR*GLNAGRQAAEV
Trigger: GACCTCAGCAGCCTGACGGCCAGCATTAAGGCCCCATCTGGCCGAGACGAGCCCTGTCTCCTGAAGAGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000481470.5
ENST00000490882.5
ENST00000491408.1
ENST00000493452.5
ENST00000682297.1
ENST00000682871.1
ENST00000683925.1
ENST00000684439.1
ENST00000684506.1
ENST00000684607.1
CDS CCA 72 bp AAGTCCGGCCTTCTGACAGGCCGCGGCCATAGACTTTaGCTCGGCGGGCGTCACCAATCTCCGACTGGACCA +
Preference number: 6 (lower is better)
Translates to: KSGLLTGRGHRL*LGGRHQSPTGP
Trigger: TGGTCCAGTCGGAGATTGGTGACGCCCGCCGAGCCAAAGTCTATGGCCGCGGCCTGTCAGAAGGCCGGACTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000481470.5
ENST00000490882.5
ENST00000493452.5
ENST00000682297.1
ENST00000682871.1
ENST00000683925.1
ENST00000684439.1
ENST00000684506.1
ENST00000684607.1
CDS CAA 72 bp CCAGCTCCTTTGGTATCGATGGTGAACTCGGCAGGCTaGCCCACGAGACCACCTTCGAGGCCGGGACCGTGG +
Preference number: 6 (lower is better)
Translates to: PAPLVSMVNSAG*PTRPPSRPGPW
Trigger: CCACGGTCCCGGCCTCGAAGGTGGTCTCGTGGGCAAGCCTGCCGAGTTCACCATCGATACCAAAGGAGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CAA 72 bp ACGCCTGAGCCCAGCCCGGGGCCGGCAATCTTGACCTaGCTGGGGTCCACAACATCCTTCACAGGAACCCTG +
Preference number: 6 (lower is better)
Translates to: TPEPSPGPAILT*LGSTTSFTGTL
Trigger: CAGGGTTCCTGTGAAGGATGTTGTGGACCCCAGCAAGGTCAAGATTGCCGGCCCCGGGCTGGGCTCAGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CAA 72 bp AGTCTGGCAGCACTCACACCACCCCTGTGGGTGGCTTaGCTGAGGCCACTGCTTTGGCCAGAGTCCCGGGCA +
Preference number: 6 (lower is better)
Translates to: SLAALTPPLWVA*LRPLLWPESRA
Trigger: TGCCCGGGACTCTGGCCAAAGCAGTGGCCTCAGCAAAGCCACCCACAGGGGTGGTGTGAGTGCTGCCAGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CAA 90 bp CCTCCAGTACCAGCTCCTTTGGTATCGATGGTGAACTCGGCAGGCTaGCCCACGAGACCACCTTCGAGGCCGGGACCGTGGGCCTTCACC +
Preference number: 6 (lower is better)
Translates to: PPVPAPLVSMVNSAG*PTRPPSRPGPWAFT
Trigger: GGTGAAGGCCCACGGTCCCGGCCTCGAAGGTGGTCTCGTGGGCAAGCCTGCCGAGTTCACCATCGATACCAAAGGAGCTGGTACTGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CAA 90 bp GGTCCAAAGACTTTGATCCTGCTGGTGTCCACGGCGGGCTCCACCTaGACCCGGGCGGGGAAGTGTGGCACGAGTTCGCCACCATACTTC +
Preference number: 6 (lower is better)
Translates to: GPKTLILLVSTAGST*TRAGKCGTSSPPYF
Trigger: GAAGTATGGTGGCGAACTCGTGCCACACTTCCCCGCCCGGGTCAAGGTGGAGCCCGCCGTGGACACCAGCAGGATCAAAGTCTTTGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS TCA 72 bp GTGTCACTAGGCATGGCACGACCTTCCGAGAGGGGCTaGGGATTGTCACGTCCAGCTTCCCCTGGCCTCCTG +
Preference number: 6 (lower is better)
Translates to: VSLGMARPSERG*GLSRPASPGLL
Trigger: CAGGAGGCCAGGGGAAGCTGGACGTGACAATCCTCAGCCCCTCTCGGAAGGTCGTGCCATGCCTAGTGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS TCA 72 bp CGGGGCACGGAGCACTGCCATCACCTAGAGCCAGTATaGAACTGCACCCTCCAGCCCCACAGGATCTGGGCA +
Preference number: 6 (lower is better)
Translates to: RGTEHCHHLEPV*NCTLQPHRIWA
Trigger: TGCCCAGATCCTGTGGGGCTGGAGGGTGCAGTTTCATACTGGCTCTAGGTGATGGCAGTGCTCCGTGCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470231.1
CDS GCA 72 bp TCGACGCTAAGGAGGCCAGCTTCACCCACCTTCCCGTaGTCGAGACCTGGCCCCGATGCCACGACTTTAGAG +
Preference number: 6 (lower is better)
Translates to: STLRRPASPTFP*SRPGPDATTLE
Trigger: CTCTAAAGTCGTGGCATCGGGGCCAGGTCTCGAGCACGGGAAGGTGGGTGAAGCTGGCCTCCTTAGCGTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS GCA 72 bp CCAGGGCCTGAATCCAGGGGGACATGCATTTACCGGTaGCTCCTCCACGGCTGTGACTTCCCCATCTGTGGC +
Preference number: 6 (lower is better)
Translates to: PGPESRGTCIYR*LLHGCDFPICG
Trigger: GCCACAGATGGGGAAGTCACAGCCGTGGAGGAGGCACCGGTAAATGCATGTCCCCCTGGATTCAGGCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295956.9
ENST00000490882.5
ENST00000684439.1
CDS CCA 72 bp TTCACAAAAGGCAAGCCGCAGGCCCAGAGTTCAGCGTaGAGCCGGGCTGGATTTGCCTGGGGAGTCTGGCAG +
Preference number: 6 (lower is better)
Translates to: FTKGKPQAQSSA*SRAGFAWGVWQ
Trigger: CTGCCAGACTCCCCAGGCAAATCCAGCCCGGCTCCACGCTGAACTCTGGGCCTGCGGCTTGCCTTTTGTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CCA 72 bp CAGCCAAGAAGCCCCTCAAGCAGCAGCTCTGAGGCCTaGGGCTACGTAGGGAAGAAGCGGGAGGTGAGCAAC +
Preference number: 6 (lower is better)
Translates to: QPRSPSSSSSEA*GYVGKKREVSN
Trigger: GTTGCTCACCTCCCGCTTCTTCCCTACGTAGCCCCAGGCCTCAGAGCTGCTGCTTGAGGGGCTTCTTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CCA 72 bp CCCAGACTGACATCAGCCTATGGACAGCTGCCCGTGTaGGCCAACAGTAGCACACGTGGCCTCTGGGGCCAA +
Preference number: 6 (lower is better)
Translates to: PRLTSAYGQLPV*ANSSTRGLWGQ
Trigger: TTGGCCCCAGAGGCCACGTGTGCTACTGTTGGCCCACACGGGCAGCTGTCCATAGGCTGATGTCAGTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682097.1
CDS TCA 72 bp CACTTCAGAGCCAATGGATTCTACCACGAAGTCCGCTaGCCGCCCGACAATCCCACCATGGAGCCCAGGGCC +
Preference number: 6 (lower is better)
Translates to: HFRANGFYHEVR*PPDNPTMEPRA
Trigger: GGCCCTGGGCTCCATGGTGGGATTGTCGGGCGGTCAGCGGACTTCGTGGTAGAATCCATTGGCTCTGAAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682097.1
ENST00000682868.1
ENST00000682871.1
ENST00000682987.1
ENST00000683511.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS TCA 72 bp TCACGTCTACAGCATACAGCCCCTCCTCCCGAGGGATaGACTTGGCCGTGCTGTTCTCCCGGCCTGTCACAG +
Preference number: 6 (lower is better)
Translates to: SRLQHTAPPPEG*TWPCCSPGLSQ
Trigger: CTGTGACAGGCCGGGAGAACAGCACGGCCAAGTTCATCCCTCGGGAGGAGGGGCTGTATGCTGTAGACGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS TCA 72 bp GTCAGTCTCACTGATGTCGAGCAGGAAGTCAGCGGCTaGGCCCAACTTCACCTGGGAGCACCGCCTGCTGTC +
Preference number: 6 (lower is better)
Translates to: VSLTDVEQEVSG*AQLHLGAPPAV
Trigger: GACAGCAGGCGGTGCTCCCAGGTGAAGTTGGGCTCAGCCGCTGACTTCCTGCTCGACATCAGTGAGACTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000481470.5
ENST00000490882.5
ENST00000491408.1
ENST00000493452.5
ENST00000682297.1
ENST00000682871.1
ENST00000683925.1
ENST00000684439.1
ENST00000684506.1
ENST00000684607.1
CDS TCA 72 bp CACGATGAAGTCAGACATCTCGAAAGTCCGGCCTTCTaGCAGGCCGCGGCCATAGACTTTGGCTCGGCGGGC +
Preference number: 6 (lower is better)
Translates to: HDEVRHLESPAF*QAAAIDFGSAG
Trigger: GCCCGCCGAGCCAAAGTCTATGGCCGCGGCCTGTCAGAAGGCCGGACTTTCGAGATGTCTGACTTCATCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000481470.5
ENST00000490882.5
ENST00000493452.5
ENST00000682297.1
ENST00000682871.1
ENST00000683925.1
ENST00000684439.1
ENST00000684506.1
ENST00000684607.1
CDS TCA 72 bp GAGGGGGCCAAGCTCGGGGGTTCAGCGCATAGGCTCTaGGGTCACGGATGTAGACTGATTCCTGGTTCTGCC +
Preference number: 6 (lower is better)
Translates to: EGAKLGGSAHRL*GHGCRLIPGSA
Trigger: GGCAGAACCAGGAATCAGTCTACATCCGTGACCTCAGAGCCTATGCGCTGAACCCCCGAGCTTGGCCCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS TCA 72 bp ATCTGTGCAGCCAAGAAGCCCCTCAAGCAGCAGCTCTaGGGCCTGGGGCTACGTAGGGAAGAAGCGGGAGGT +
Preference number: 6 (lower is better)
Translates to: ICAAKKPLKQQL*GLGLRREEAGG
Trigger: ACCTCCCGCTTCTTCCCTACGTAGCCCCAGGCCTCAGAGCTGCTGCTTGAGGGGCTTCTTGGCTGCACAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS GCA 72 bp TCCTTCACTGCATCGCCAGGAAGAGGGCTGTTGAACTaGACGTTGAGCGGGGCTTTCCCAGCCCCCTTGGTG +
Preference number: 6 (lower is better)
Translates to: SFTASPGRGLLN*TLSGAFPAPLV
Trigger: CACCAAGGGGGCTGGGAAAGCCCCGCTCAACGTGCAGTTCAACAGCCCTCTTCCTGGCGATGCAGTGAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684107.1
ENST00000684506.1
ENST00000684607.1
CDS GCA 72 bp CGAGTTCGCCACCATACTTCATGGTCAACGTGTACATaGCGGCCGTCAGGGGCACGTAGGTCACCGCGTAGG +
Preference number: 6 (lower is better)
Translates to: RVRHHTSWSTCT*RPSGARRSPRR
Trigger: CCTACGCGGTGACCTACGTGCCCCTGACGGCCGGCATGTACACGTTGACCATGAAGTATGGTGGCGAACTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS GCA 72 bp CTCTTCGGTCACCCAGGGCCTGAATCCAGGGGGACATaGATTTACCGGTGCCTCCTCCACGGCTGTGACTTC +
Preference number: 6 (lower is better)
Translates to: LFGHPGPESRGT*IYRCLLHGCDF
Trigger: GAAGTCACAGCCGTGGAGGAGGCACCGGTAAATGCATGTCCCCCTGGATTCAGGCCCTGGGTGACCGAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295956.9
ENST00000490882.5
CDS GCA 72 bp CAAGACCACATCACTCTCCGTGAGCTGCTCACGTCATaGCAACGACTGTGCCTGCACTGCCGTGGTGAGGCC +
Preference number: 6 (lower is better)
Translates to: QDHITLRELLTS*QRLCLHCRGEA
Trigger: GGCCTCACCACGGCAGTGCAGGCACAGTCGTTGGCATGACGTGAGCAGCTCACGGAGAGTGATGTGGTCTTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682503.1
CDS CCA 72 bp CGGGGAAGTGTGGCACGAGTTCGCCACCATACTTCATaGTCAACGTGTACATGCCGGCCGTCAGGGGCACGT +
Preference number: 6 (lower is better)
Translates to: RGSVARVRHHTS*STCTCRPSGAR
Trigger: ACGTGCCCCTGACGGCCGGCATGTACACGTTGACCATGAAGTATGGTGGCGAACTCGTGCCACACTTCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CCA 72 bp CGCATGCCTGCTACAGTGCCCTCTATGGGGCATGCCTaGCATAGCATCCCCATGCAGGGCTATGCTTCTGCC +
Preference number: 6 (lower is better)
Translates to: RMPATVPSMGHA*HSIPMQGYASA
Trigger: GGCAGAAGCATAGCCCTGCATGGGGATGCTATGCCAGGCATGCCCCATAGAGGGCACTGTAGCAGGCATGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CCA 72 bp ATCAGGTCTGGCGCATGCCTGCTACAGTGCCCTCTATaGGGCATGCCTGGCATAGCATCCCCATGCAGGGCT +
Preference number: 6 (lower is better)
Translates to: IRSGACLLQCPL*GMPGIASPCRA
Trigger: AGCCCTGCATGGGGATGCTATGCCAGGCATGCCCCATAGAGGGCACTGTAGCAGGCATGCGCCAGACCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CAA 72 bp TCTACAGCATACAGCCCCTCCTCCCGAGGGATGAACTaGGCCGTGCTGTTCTCCCGGCCTGTCACAGGTGTC +
Preference number: 6 (lower is better)
Translates to: STAYSPSSRGMN*AVLFSRPVTGV
Trigger: GACACCTGTGACAGGCCGGGAGAACAGCACGGCCAAGTTCATCCCTCGGGAGGAGGGGCTGTATGCTGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CAA 90 bp GTAGACGACCTGGTCACTGACTCCACCAGGATGGATGAGGTCTCGTaGGCTGAGCCAGGGCTAACTAGACGCTGGCCTGTCACCTTGGCC +
Preference number: 6 (lower is better)
Translates to: VDDLVTDSTRMDEVS*AEPGLTRRWPVTLA
Trigger: GGCCAAGGTGACAGGCCAGCGTCTAGTTAGCCCTGGCTCAGCCAACGAGACCTCATCCATCCTGGTGGAGTCAGTGACCAGGTCGTCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000419752.4
ENST00000429972.6
ENST00000484981.1
ENST00000490882.5
ENST00000493452.5
ENST00000682297.1
ENST00000682503.1
ENST00000682871.1
ENST00000683114.1
ENST00000684439.1
ENST00000684506.1
ENST00000684607.1
CDS TCA 72 bp CGCATTGTCTGTGACAAAGCACTCGGTGGAGGCCCCTaGGGGGTTGGCAATGTGGGCCTTGATGTGGTCACC +
Preference number: 6 (lower is better)
Translates to: RIVCDKALGGGP*GVGNVGLDVVT
Trigger: GGTGACCACATCAAGGCCCACATTGCCAACCCCTCAGGGGCCTCCACCGAGTGCTTTGTCACAGACAATGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS TCA 72 bp GGAGTGGGCTCTCAGGGATGTGGCTGCCCATGTATTTaGTGTGCATCTCATGGAGCCCGACCTCAGTGGGGG +
Preference number: 6 (lower is better)
Translates to: GVGSQGCGCPCI*CASHGARPQWG
Trigger: CCCCCACTGAGGTCGGGCTCCATGAGATGCACATCAAATACATGGGCAGCCACATCCCTGAGAGCCCACTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000481470.5
ENST00000490882.5
ENST00000493452.5
ENST00000682297.1
ENST00000684439.1
ENST00000684506.1
ENST00000684607.1
CDS GCA 72 bp GGCACTTGCTGGCATCACCCGTCTGTGTGGCTCGGATaGGATAAGGAGAAAGTGGGATGTCGTCACCCCCGT +
Preference number: 6 (lower is better)
Translates to: GTCWHHPSVWLG*DKEKVGCRHPR
Trigger: ACGGGGGTGACGACATCCCACTTTCTCCTTATCGCATCCGAGCCACACAGACGGGTGATGCCAGCAAGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000481470.5
ENST00000490882.5
ENST00000493452.5
ENST00000682297.1
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS GCA 72 bp GTGAGTACCTTGTCAGGGCCCAAGTGCCAGCACTGCTaGCTGGAAAGTACTCCTGAGTGGCTGGGAGGACAG +
Preference number: 6 (lower is better)
Translates to: VSTLSGPKCQHC*LESTPEWLGGQ
Trigger: CTGTCCTCCCAGCCACTCAGGAGTACTTTCCAGGCAGCAGTGCTGGCACTTGGGCCCTGACAAGGTACTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS GCA 72 bp GGGCCCTCAAAGGTGAGTACCTTGTCAGGGCCCAAGTaGCAGCACTGCTGCCTGGAAAGTACTCCTGAGTGG +
Preference number: 6 (lower is better)
Translates to: GPSKVSTLSGPK*QHCCLESTPEW
Trigger: CCACTCAGGAGTACTTTCCAGGCAGCAGTGCTGGCACTTGGGCCCTGACAAGGTACTCACCTTTGAGGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS GCA 72 bp CGGGGCATGCGTACCCCACTCCGGCTCCAGGTCCTGTaGACAGCACCATTTACGCATGTGGTATGGAATCCT +
Preference number: 6 (lower is better)
Translates to: RGMRTPLRLQVL*TAPFTHVVWNP
Trigger: AGGATTCCATACCACATGCGTAAATGGTGCTGTGCACAGGACCTGGAGCCGGAGTGGGGTACGCATGCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS GCA 72 bp CTGGGGAGGACCTTCTGCCCTCACGCCTCCAAGTACTaGACGTACCACCTTGGGGGTTTATCCACAGCCAGA +
Preference number: 6 (lower is better)
Translates to: LGRTFCPHASKY*TYHLGGLSTAR
Trigger: TCTGGCTGTGGATAAACCCCCAAGGTGGTACGTGCAGTACTTGGAGGCGTGAGGGCAGAAGGTCCTCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000477629.1
ENST00000683114.1
CDS GCA 72 bp TGTCCACTTTGCTGGGGCCTTCCACCGCCAAGGATATaGCACCATAACCTGCAACACAGCAGCCCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: CPLCWGLPPPRI*HHNLQHSSPRL
Trigger: CAGCCTGGGGCTGCTGTGTTGCAGGTTATGGTGGCATATCCTTGGCGGTGGAAGGCCCCAGCAAAGTGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477629.1
ENST00000683114.1
CDS GCA 72 bp TGCCTGGGGCAGATGAATGTCTGCAGGAAGGCAGGGTaGACACTTACCTCGTGGGCCCAGAACCCTCACTTC +
Preference number: 6 (lower is better)
Translates to: CLGQMNVCRKAG*TLTSWAQNPHF
Trigger: GAAGTGAGGGTTCTGGGCCCACGAGGTAAGTGTGCACCCTGCCTTCCTGCAGACATTCATCTGCCCCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS CCA 72 bp CCGTGGCCAGGCACTTGCTGGCATCACCCGTCTGTGTaGCTCGGATGCGATAAGGAGAAAGTGGGATGTCGT +
Preference number: 6 (lower is better)
Translates to: PWPGTCWHHPSV*LGCDKEKVGCR
Trigger: ACGACATCCCACTTTCTCCTTATCGCATCCGAGCCACACAGACGGGTGATGCCAGCAAGTGCCTGGCCACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000481470.5
ENST00000490882.5
ENST00000493452.5
ENST00000682297.1
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CCA 72 bp TGCATGGCTCTGGTGCCAGGCTCATCTCTTGACCCCTaGATGGGCAGTGGAGCTGCCTCAGATCCCCTAACT +
Preference number: 6 (lower is better)
Translates to: CMALVPGSSLDP*MGSGAASDPLT
Trigger: AGTTAGGGGATCTGAGGCAGCTCCACTGCCCATCCAGGGGTCAAGAGATGAGCCTGGCACCAGAGCCATGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CCA 72 bp TCTGCCTCAGTCACACGGCCAGAGGGGCTGGTGACGTaGGCCGACATATCACTGCTGTTGATTTCAGGCACG +
Preference number: 6 (lower is better)
Translates to: SASVTRPEGLVT*ADISLLLISGT
Trigger: CGTGCCTGAAATCAACAGCAGTGATATGTCGGCCCACGTCACCAGCCCCTCTGGCCGTGTGACTGAGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466455.1
CDS CAA 72 bp TCCAAATCCTTCACTGCATCGCCAGGAAGAGGGCTGTaGAACTGCACGTTGAGCGGGGCTTTCCCAGCCCCC +
Preference number: 6 (lower is better)
Translates to: SKSFTASPGRGL*NCTLSGAFPAP
Trigger: GGGGGCTGGGAAAGCCCCGCTCAACGTGCAGTTCAACAGCCCTCTTCCTGGCGATGCAGTGAAGGATTTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684107.1
ENST00000684506.1
ENST00000684607.1
CDS CAA 72 bp GCCAGTGAGGCCGGGATTTGGGAATGCGGCTGCCCATaGTGGTATGGGCTTTGTCTAAGTGGCTCCAGACCC +
Preference number: 6 (lower is better)
Translates to: ASEAGIWECGCP*WYGLCLSGSRP
Trigger: GGGTCTGGAGCCACTTAGACAAAGCCCATACCACAATGGGCAGCCGCATTCCCAAATCCCGGCCTCACTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684439.1
CDS CAA 90 bp CTGTGCGGGATGTTCACGCCTCCCCAGACCACAGCAATGGTGTGCTaGATGGCCTTCACCGGGGTGTATGAGCATGCATATGTGCCGTCC +
Preference number: 6 (lower is better)
Translates to: LCGMFTPPQTTAMVC*MAFTGVYEHAYVPS
Trigger: GGACGGCACATATGCATGCTCATACACCCCGGTGAAGGCCATCAAGCACACCATTGCTGTGGTCTGGGGAGGCGTGAACATCCCGCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS CAA 90 bp GCTTCCCGGAACACATCTTTCCCTTCTATTCCTGGTCCAAAGACTTaGATCCTGCTGGTGTCCACGGCGGGCTCCACCTTGACCCGGGCG +
Preference number: 6 (lower is better)
Translates to: ASRNTSFPSIPGPKT*ILLVSTAGSTLTRA
Trigger: CGCCCGGGTCAAGGTGGAGCCCGCCGTGGACACCAGCAGGATCAAAGTCTTTGGACCAGGAATAGAAGGGAAAGATGTGTTCCGGGAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CAA 90 bp CACCAACAGCCTGGACACCCTGTTCTCTCCTCTGGGCATGAGCCATaGTGGCTGAGGGCAAGAAGCCTGAGTCACACTGTGAGCCTGAAG +
Preference number: 6 (lower is better)
Translates to: HQQPGHPVLSSGHEP*WLRARSLSHTVSLK
Trigger: CTTCAGGCTCACAGTGTGACTCAGGCTTCTTGCCCTCAGCCACAATGGCTCATGCCCAGAGGAGAGAACAGGGTGTCCAGGCTGTTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CAA 90 bp TCAGCACAGCCGACTTGGATACTGTGTTCTGGGCCATGCCTAAACTaGGTTCCCAAAGGCACCCACTGCCCTGAAGGCTGGAGCCAAGGC +
Preference number: 6 (lower is better)
Translates to: SAQPTWILCSGPCLN*VPKGTHCPEGWSQG
Trigger: GCCTTGGCTCCAGCCTTCAGGGCAGTGGGTGCCTTTGGGAACCAAGTTTAGGCATGGCCCAGAACACAGTATCCAAGTCGGCTGTGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477629.1
ENST00000683925.1
CDS TCA 72 bp CCAGACCTCCAGTACCAGCTCCTTTGGTATCGATGGTaGACTCGGCAGGCTTGCCCACGAGACCACCTTCGA +
Preference number: 6 (lower is better)
Translates to: PDLQYQLLWYRW*TRQACPRDHLR
Trigger: TCGAAGGTGGTCTCGTGGGCAAGCCTGCCGAGTTCACCATCGATACCAAAGGAGCTGGTACTGGAGGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS GCA 72 bp GGGATGTTCACGCCTCCCCAGACCACAGCAATGGTGTaGTTGATGGCCTTCACCGGGGTGTATGAGCATGCA +
Preference number: 6 (lower is better)
Translates to: GMFTPPQTTAMV*LMAFTGVYEHA
Trigger: TGCATGCTCATACACCCCGGTGAAGGCCATCAAGCACACCATTGCTGTGGTCTGGGGAGGCGTGAACATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS GCA 72 bp AAGGTGAGTACCTTGTCAGGGCCCAAGTGCCAGCACTaGTGCCTGGAAAGTACTCCTGAGTGGCTGGGAGGA +
Preference number: 6 (lower is better)
Translates to: KVSTLSGPKCQH*CLESTPEWLGG
Trigger: TCCTCCCAGCCACTCAGGAGTACTTTCCAGGCAGCAGTGCTGGCACTTGGGCCCTGACAAGGTACTCACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS GCA 72 bp GGGTGCAGCCACTGTGACCTGCCAGCCCACCCACTTTaGCGTGAATTCCAGCAACAAGCACAGGAACAGAAC +
Preference number: 6 (lower is better)
Translates to: GCSHCDLPAHPL*REFQQQAQEQN
Trigger: GTTCTGTTCCTGTGCTTGTTGCTGGAATTCACGGCAAAGTGGGTGGGCTGGCAGGTCACAGTGGCTGCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS GCA 72 bp AGGGCAAGAAGCCTGAGTCACACTGTGAGCCTGAAGTaGTGCTTCAGCCACCAGAGTCCAGCTCTCCCTCCA +
Preference number: 6 (lower is better)
Translates to: RARSLSHTVSLK*CFSHQSPALPP
Trigger: TGGAGGGAGAGCTGGACTCTGGTGGCTGAAGCAGCACTTCAGGCTCACAGTGTGACTCAGGCTTCTTGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CCA 72 bp TGCTCGAACCAGATCAGGGTTGTAGCCTCCCGTGGCTaGGTGGATGAAGGCCATGTACGGGCTGTCCTTGAT +
Preference number: 6 (lower is better)
Translates to: CSNQIRVVASRG*VDEGHVRAVLD
Trigger: ATCAAGGACAGCCCGTACATGGCCTTCATCCACCCAGCCACGGGAGGCTACAACCCTGATCTGGTTCGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS CCA 72 bp TTGGCAATGTGGGCCTTGATGTGGTCACCCCCAACCTaGGTCAGCGGCCGAGAGTCAACTGTAAAGTCGGTG +
Preference number: 6 (lower is better)
Translates to: LAMWALMWSPPT*VSGRESTVKSV
Trigger: CACCGACTTTACAGTTGACTCTCGGCCGCTGACCCAGGTTGGGGGTGACCACATCAAGGCCCACATTGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CCA 72 bp AAGTGCCAGCACTGCTGCCTGGAAAGTACTCCTGAGTaGCTGGGAGGACAGGGGTCCTGGTTTAGGACATCC +
Preference number: 6 (lower is better)
Translates to: KCQHCCLESTPE*LGGQGSWFRTS
Trigger: GGATGTCCTAAACCAGGACCCCTGTCCTCCCAGCCACTCAGGAGTACTTTCCAGGCAGCAGTGCTGGCACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CCA 72 bp AGCTCCCAAAAAGGTGTGCGAACAGCCAAAAGGAAATaGGAGAGGGCCCAGGCACAGCGGCATGAGCCAGCA +
Preference number: 6 (lower is better)
Translates to: SSQKGVRTAKRK*ERAQAQRHEPA
Trigger: TGCTGGCTCATGCCGCTGTGCCTGGGCCCTCTCCCATTTCCTTTTGGCTGTTCGCACACCTTTTTGGGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CCA 72 bp GGGTTTGAAGCAGGCGGTTCTGTACCTCTCCCCTCCTaGCTAGGAGCTTCCCTGCAAGAGCAACTCCTTCTC +
Preference number: 6 (lower is better)
Translates to: GFEAGGSVPLPS*LGASLQEQLLL
Trigger: GAGAAGGAGTTGCTCTTGCAGGGAAGCTCCTAGCCAGGAGGGGAGAGGTACAGAACCGCCTGCTTCAAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CCA 72 bp GGACACCCTGTTCTCTCCTCTGGGCATGAGCCATTGTaGCTGAGGGCAAGAAGCCTGAGTCACACTGTGAGC +
Preference number: 6 (lower is better)
Translates to: GHPVLSSGHEPL*LRARSLSHTVS
Trigger: GCTCACAGTGTGACTCAGGCTTCTTGCCCTCAGCCACAATGGCTCATGCCCAGAGGAGAGAACAGGGTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CCA 72 bp GGGACACACATAGATCCCCTTACAGAGGGCTCACCCTaGTGGCATGGGAACCCACTGGCACTAGCTCTGAAC +
Preference number: 6 (lower is better)
Translates to: GTHIDPLTEGSP*WHGNPLALALN
Trigger: GTTCAGAGCTAGTGCCAGTGGGTTCCCATGCCACCAGGGTGAGCCCTCTGTAAGGGGATCTATGTGTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CCA 72 bp GGCCGGGATTTGGGAATGCGGCTGCCCATTGTGGTATaGGCTTTGTCTAAGTGGCTCCAGACCCAGGGTAGA +
Preference number: 6 (lower is better)
Translates to: GRDLGMRLPIVV*ALSKWLQTQGR
Trigger: TCTACCCTGGGTCTGGAGCCACTTAGACAAAGCCCATACCACAATGGGCAGCCGCATTCCCAAATCCCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684439.1
CDS CCA 72 bp AGTGAGGCCGGGATTTGGGAATGCGGCTGCCCATTGTaGTATGGGCTTTGTCTAAGTGGCTCCAGACCCAGG +
Preference number: 6 (lower is better)
Translates to: SEAGIWECGCPL*YGLCLSGSRPR
Trigger: CCTGGGTCTGGAGCCACTTAGACAAAGCCCATACCACAATGGGCAGCCGCATTCCCAAATCCCGGCCTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684439.1
CDS CAA 72 bp TGGAGTGGGCTCTCAGGGATGTGGCTGCCCATGTATTaGATGTGCATCTCATGGAGCCCGACCTCAGTGGGG +
Preference number: 6 (lower is better)
Translates to: WSGLSGMWLPMY*MCISWSPTSVG
Trigger: CCCCACTGAGGTCGGGCTCCATGAGATGCACATCAAATACATGGGCAGCCACATCCCTGAGAGCCCACTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000481470.5
ENST00000490882.5
ENST00000493452.5
ENST00000682297.1
ENST00000684439.1
ENST00000684506.1
ENST00000684607.1
CDS CAA 90 bp GTAGACGACCTGGTCACTGACTCCACCAGGATGGATGAGGTCTCGTaGGCTGAGCCAGGGCTAACTAGACGCTGGCCTAAGATACAGGAG +
Preference number: 6 (lower is better)
Translates to: VDDLVTDSTRMDEVS*AEPGLTRRWPKIQE
Trigger: CTCCTGTATCTTAGGCCAGCGTCTAGTTAGCCCTGGCTCAGCCAACGAGACCTCATCCATCCTGGTGGAGTCAGTGACCAGGTCGTCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481470.5
CDS CAA 90 bp TGGTGCTCATTAAGGGGTGAACGAAGACCCTGGACAACTGGCATCTaGACGTCCACCTCTCTACAGGTCTGGCGCCTCCTAAGCAGAGGC +
Preference number: 6 (lower is better)
Translates to: WCSLRGERRPWTTGI*TSTSLQVWRLLSRG
Trigger: GCCTCTGCTTAGGAGGCGCCAGACCTGTAGAGAGGTGGACGTCAAGATGCCAGTTGTCCAGGGTCTTCGTTCACCCCTTAATGAGCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683925.1
CDS GCA 72 bp GGGCTCTCAGGGATGTGGCTGCCCATGTATTTGATGTaGATCTCATGGAGCCCGACCTCAGTGGGGGCATAT +
Preference number: 6 (lower is better)
Translates to: GLSGMWLPMYLM*ISWSPTSVGAY
Trigger: ATATGCCCCCACTGAGGTCGGGCTCCATGAGATGCACATCAAATACATGGGCAGCCACATCCCTGAGAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000481470.5
ENST00000490882.5
ENST00000493452.5
ENST00000682297.1
ENST00000684439.1
ENST00000684506.1
ENST00000684607.1
CDS GCA 72 bp CCAAAATTGTACCCAGGGCCTGAATCCAGGGGGACATaGATTTACCGGTGCCTCCTCCACGGCTGTGACTTC +
Preference number: 6 (lower is better)
Translates to: PKLYPGPESRGT*IYRCLLHGCDF
Trigger: GAAGTCACAGCCGTGGAGGAGGCACCGGTAAATGCATGTCCCCCTGGATTCAGGCCCTGGGTACAATTTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684439.1
CDS GCA 72 bp CTACAAGCCAGTGAGGCCGGGATTTGGGAATGCGGCTaGCCATTGTGGTATGGGCTTTGTCTAAGTGGCTCC +
Preference number: 6 (lower is better)
Translates to: LQASEAGIWECG*PLWYGLCLSGS
Trigger: GGAGCCACTTAGACAAAGCCCATACCACAATGGGCAGCCGCATTCCCAAATCCCGGCCTCACTGGCTTGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684439.1
CDS CCA 72 bp CAATGGCAAACCCCAGAGACCCCACTTCAGAGCCAATaGATTCTACCACGAAGTCCGCTGACCGCCCGACAA +
Preference number: 6 (lower is better)
Translates to: QWQTPETPLQSQ*ILPRSPLTARQ
Trigger: TTGTCGGGCGGTCAGCGGACTTCGTGGTAGAATCCATTGGCTCTGAAGTGGGGTCTCTGGGGTTTGCCATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682097.1
ENST00000682868.1
ENST00000682871.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS CCA 72 bp CTCTTTCAATCCAGGTCCTTGGGCTTGCACCCTAGATaGCTGGCAGCCTTCAGTGACAGCCACCTTGAAGGG +
Preference number: 6 (lower is better)
Translates to: LFQSRSLGLHPR*LAAFSDSHLEG
Trigger: CCCTTCAAGGTGGCTGTCACTGAAGGCTGCCAGCCATCTAGGGTGCAAGCCCAAGGACCTGGATTGAAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CCA 72 bp TCTGCCTCAGTCACACGGCCAGAGGGGCTGGTGACGTaGGCCGACATATCACTGCTGTTGATTTCTGGGATT +
Preference number: 6 (lower is better)
Translates to: SASVTRPEGLVT*ADISLLLISGI
Trigger: AATCCCAGAAATCAACAGCAGTGATATGTCGGCCCACGTCACCAGCCCCTCTGGCCGTGTGACTGAGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000481470.5
ENST00000490882.5
ENST00000493452.5
ENST00000682297.1
ENST00000682871.1
ENST00000683114.1
ENST00000684439.1
ENST00000684506.1
ENST00000684607.1
CDS CCA 72 bp AAATTGCTCAGCGGCTCCAAAGAATCTGGAGCTCCCTaGTCTATCTCCCAGCCTCTCAAGCCGCCTCCAGCA +
Preference number: 6 (lower is better)
Translates to: KLLSGSKESGAP*SISQPLKPPPA
Trigger: TGCTGGAGGCGGCTTGAGAGGCTGGGAGATAGACCAGGGAGCTCCAGATTCTTTGGAGCCGCTGAGCAATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CCA 72 bp CATAGATCCCCTTACAGAGGGCTCACCCTGGTGGCATaGGAACCCACTGGCACTAGCTCTGAACTTCTGGCA +
Preference number: 6 (lower is better)
Translates to: HRSPYRGLTLVA*EPTGTSSELLA
Trigger: TGCCAGAAGTTCAGAGCTAGTGCCAGTGGGTTCCCATGCCACCAGGGTGAGCCCTCTGTAAGGGGATCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CCA 72 bp CTGATTCACCAGATCAGGGTTGTAGCCTCCCGTGGCTaGGTGGATGAAGGCCATGTACGGGCTGTCCTTGAT +
Preference number: 6 (lower is better)
Translates to: LIHQIRVVASRG*VDEGHVRAVLD
Trigger: ATCAAGGACAGCCCGTACATGGCCTTCATCCACCCAGCCACGGGAGGCTACAACCCTGATCTGGTGAATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682097.1
CDS CAA 72 bp TGGCCCAAACACTTTGACCTTCTGAGGATGGCTACCTaGCCCGATGTTGACCCTGTAGGGGCTGTGCGGGAT +
Preference number: 6 (lower is better)
Translates to: WPKHFDLLRMAT*PDVDPVGAVRD
Trigger: ATCCCGCACAGCCCCTACAGGGTCAACATCGGGCAAGGTAGCCATCCTCAGAAGGTCAAAGTGTTTGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS CAA 72 bp CCGACTTGGATACTGTGTTCTGGGCCATGCCTAAACTaGGTTCCCAAAGGCACCCACTGCCCTGAAGGCTGG +
Preference number: 6 (lower is better)
Translates to: PTWILCSGPCLN*VPKGTHCPEGW
Trigger: CCAGCCTTCAGGGCAGTGGGTGCCTTTGGGAACCAAGTTTAGGCATGGCCCAGAACACAGTATCCAAGTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477629.1
ENST00000683925.1
CDS CAA 90 bp TGGGCTTGCACCCTAGATGGCTGGCAGCCTTCAGTGACAGCCACCTaGAAGGGACTGTTTGGGATAGGCACGTCATCATATGTCACCTCC +
Preference number: 6 (lower is better)
Translates to: WACTLDGWQPSVTAT*KGLFGIGTSSYVTS
Trigger: GGAGGTGACATATGATGACGTGCCTATCCCAAACAGTCCCTTCAAGGTGGCTGTCACTGAAGGCTGCCAGCCATCTAGGGTGCAAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS TCA 72 bp TGTTCACGCCTCCCCAGACCACAGCAATGGTGTGCTTaGTGGCCTTCACCGGGGTGTATGAGCATGCATATG +
Preference number: 6 (lower is better)
Translates to: CSRLPRPQQWCA*WPSPGCMSMHM
Trigger: CATATGCATGCTCATACACCCCGGTGAAGGCCATCAAGCACACCATTGCTGTGGTCTGGGGAGGCGTGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS TCA 72 bp ACTCTCAAACACAACCCAGCTGTTCCTGGAAGCTCTTaGGGCTCCTGCCCCAAGGTCCACCCCCAACACTAT +
Preference number: 6 (lower is better)
Translates to: TLKHNPAVPGSS*GSCPKVHPQHY
Trigger: ATAGTGTTGGGGGTGGACCTTGGGGCAGGAGCCTCAAGAGCTTCCAGGAACAGCTGGGTTGTGTTTGAGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS TCA 72 bp ACCCATGCTGGGGGCACTGAGACTTTTTGCCAAAGGTaGCGTGGTCATCCATCATGCACAGACGGGCTCCTT +
Preference number: 6 (lower is better)
Translates to: THAGGTETFCQR*RGHPSCTDGLL
Trigger: AAGGAGCCCGTCTGTGCATGATGGATGACCACGTCACCTTTGGCAAAAAGTCTCAGTGCCCCCAGCATGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000682503.1
CDS GCA 72 bp TTGGTAAAGGCCTCTTTCAATCCAGGTCCTTGGGCTTaGACCCTAGATGGCTGGCAGCCTTCAGTGACAGCC +
Preference number: 6 (lower is better)
Translates to: LVKASFNPGPWA*TLDGWQPSVTA
Trigger: GGCTGTCACTGAAGGCTGCCAGCCATCTAGGGTGCAAGCCCAAGGACCTGGATTGAAAGAGGCCTTTACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS GCA 72 bp AAGGTGCTCTTCTCCATGGCCAGAGGGCGTGTGAACTaGAACAGCCCCTCTGAAGGGCAATTTGGCAAGATC +
Preference number: 6 (lower is better)
Translates to: KVLFSMARGRVN*NSPSEGQFGKI
Trigger: GATCTTGCCAAATTGCCCTTCAGAGGGGCTGTTGCAGTTCACACGCCCTCTGGCCATGGAGAAGAGCACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683925.1
CDS CCA 72 bp GGCTTGTTGGTAAAGGCCTCTTTCAATCCAGGTCCTTaGGCTTGCACCCTAGATGGCTGGCAGCCTTCAGTG +
Preference number: 6 (lower is better)
Translates to: GLLVKASFNPGP*ACTLDGWQPSV
Trigger: CACTGAAGGCTGCCAGCCATCTAGGGTGCAAGCCCAAGGACCTGGATTGAAAGAGGCCTTTACCAACAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CCA 72 bp ACCCGTCTGTGTGGCTCGGATGCGATAAGGAGAAAGTaGGATGTCGTCACCCCCGTAGGTGACTCCAATCAT +
Preference number: 6 (lower is better)
Translates to: TRLCGSDAIRRK*DVVTPVGDSNH
Trigger: ATGATTGGAGTCACCTACGGGGGTGACGACATCCCACTTTCTCCTTATCGCATCCGAGCCACACAGACGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000481470.5
ENST00000490882.5
ENST00000493452.5
ENST00000682297.1
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CCA 72 bp CGAGGCCTGGACCGTATGCAGAAACACTTCCACTGTTaGGGTAGTTCACGTAGAACTGGAGTGGGCTCTCAG +
Preference number: 6 (lower is better)
Translates to: RGLDRMQKHFHC*GSSRRTGVGSQ
Trigger: CTGAGAGCCCACTCCAGTTCTACGTGAACTACCCCAACAGTGGAAGTGTTTCTGCATACGGTCCAGGCCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000481470.5
ENST00000490882.5
ENST00000493452.5
ENST00000682297.1
ENST00000682871.1
ENST00000684439.1
ENST00000684506.1
ENST00000684607.1
CDS CCA 72 bp ACACACATAGATCCCCTTACAGAGGGCTCACCCTGGTaGCATGGGAACCCACTGGCACTAGCTCTGAACTTC +
Preference number: 6 (lower is better)
Translates to: THIDPLTEGSPW*HGNPLALALNF
Trigger: GAAGTTCAGAGCTAGTGCCAGTGGGTTCCCATGCCACCAGGGTGAGCCCTCTGTAAGGGGATCTATGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CCA 72 bp TCTGCCTCAGTCACACGGCCAGAGGGGCTGGTGACGTaGGCCGACATATCACTGCTGTTGATTTCTGAAAGA +
Preference number: 6 (lower is better)
Translates to: SASVTRPEGLVT*ADISLLLISER
Trigger: TCTTTCAGAAATCAACAGCAGTGATATGTCGGCCCACGTCACCAGCCCCTCTGGCCGTGTGACTGAGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682503.1
CDS CCA 72 bp TTTGGATTGCAGGCAAGCAAGAGGCCTCTGGCCCAGTaGTCTCAACTAGGAAGCCAACAGCTTCAGGGTCCA +
Preference number: 6 (lower is better)
Translates to: FGLQASKRPLAQ*SQLGSQQLQGP
Trigger: TGGACCCTGAAGCTGTTGGCTTCCTAGTTGAGACCACTGGGCCAGAGGCCTCTTGCTTGCCTGCAATCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000682097.1
ENST00000683511.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
CDS CCA 72 bp CCGAGCGTGATCACAGACACGACGGCTGGCGATTCGTaGAGCACGGATGGTGACGCAAAGGTGATCTTATTA +
Preference number: 6 (lower is better)
Translates to: PSVITDTTAGDS*STDGDAKVILL
Trigger: TAATAAGATCACCTTTGCGTCACCATCCGTGCTCCACGAATCGCCAGCCGTCGTGTCTGTGATCACGCTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684439.1
CDS CCA 72 bp CTGCTGGGAATTCTACAAGCCAGTGAGGCCGGGATTTaGGAATGCGGCTGCCCATTGTGGTATGGGCTTTGT +
Preference number: 6 (lower is better)
Translates to: LLGILQASEAGI*ECGCPLWYGLC
Trigger: ACAAAGCCCATACCACAATGGGCAGCCGCATTCCCAAATCCCGGCCTCACTGGCTTGTAGAATTCCCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684439.1
CDS CCA 72 bp CCATGCCATTCAACCTGTAAGGAATCAACCCCACAGTaGTCTTCTCTGCCCACCCCGACTCCTAGCCCTATG +
Preference number: 6 (lower is better)
Translates to: PCHSTCKESTPQ*SSLPTPTPSPM
Trigger: CATAGGGCTAGGAGTCGGGGTGGGCAGAGAAGACCACTGTGGGGTTGATTCCTTACAGGTTGAATGGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683925.1
CDS CCA 72 bp CGAGGCCTGGACCGTATGCAGAAACACTTCCACTGTTaGGGTAGTTCACGTAGAACTGGAGTGGGCTCTCTG +
Preference number: 6 (lower is better)
Translates to: RGLDRMQKHFHC*GSSRRTGVGSL
Trigger: CAGAGAGCCCACTCCAGTTCTACGTGAACTACCCCAACAGTGGAAGTGTTTCTGCATACGGTCCAGGCCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683925.1
CDS CAA 72 bp GTTGGTAAAGGCCTCTTTCAATCCAGGTCCTTGGGCTaGCACCCTAGATGGCTGGCAGCCTTCAGTGACAGC +
Preference number: 6 (lower is better)
Translates to: VGKGLFQSRSLG*HPRWLAAFSDS
Trigger: GCTGTCACTGAAGGCTGCCAGCCATCTAGGGTGCAAGCCCAAGGACCTGGATTGAAAGAGGCCTTTACCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CAA 72 bp GGGCTTGTTGGTAAAGGCCTCTTTCAATCCAGGTCCTaGGGCTTGCACCCTAGATGGCTGGCAGCCTTCAGT +
Preference number: 6 (lower is better)
Translates to: GLVGKGLFQSRS*GLHPRWLAAFS
Trigger: ACTGAAGGCTGCCAGCCATCTAGGGTGCAAGCCCAAGGACCTGGATTGAAAGAGGCCTTTACCAACAAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CAA 72 bp GTCACGCTACACAACCAGAAAGTGGTAGAGCCGGGTTaGAACCATGTCTGCATGGCTCTGGTGCCAGGCTCA +
Preference number: 6 (lower is better)
Translates to: VTLHNQKVVEPG*NHVCMALVPGS
Trigger: TGAGCCTGGCACCAGAGCCATGCAGACATGGTTCAAACCCGGCTCTACCACTTTCTGGTTGTGTAGCGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CAA 72 bp ACTGAGCCCCACAGAGCCCCTGTCCCTCTTCCATCCTaGTTCAAACCTGCAGTGCTAGGTTTCGTCTGTTGC +
Preference number: 6 (lower is better)
Translates to: TEPHRAPVPLPS*FKPAVLGFVCC
Trigger: GCAACAGACGAAACCTAGCACTGCAGGTTTGAACAAGGATGGAAGAGGGACAGGGGCTCTGTGGGGCTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468939.1
CDS CAA 72 bp TTAAGGGGTGAACGAAGACCCTGGACAACTGGCATCTaGACGTCCACCTCTCTACAGGTCTGGCGCCTCCTA +
Preference number: 6 (lower is better)
Translates to: LRGERRPWTTGI*TSTSLQVWRLL
Trigger: TAGGAGGCGCCAGACCTGTAGAGAGGTGGACGTCAAGATGCCAGTTGTCCAGGGTCTTCGTTCACCCCTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683925.1
CDS CAA 90 bp GAAGACATTGGGCTTGTTGGTAAAGGCCTCTTTCAATCCAGGTCCTaGGGCTTGCACCCTAGATGGCTGGCAGCCTTCAGTGACAGCCAC +
Preference number: 6 (lower is better)
Translates to: EDIGLVGKGLFQSRS*GLHPRWLAAFSDSH
Trigger: GTGGCTGTCACTGAAGGCTGCCAGCCATCTAGGGTGCAAGCCCAAGGACCTGGATTGAAAGAGGCCTTTACCAACAAGCCCAATGTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CAA 90 bp CCACCAATTCCTGCGCCTCTGGTAACCACGGTGAAGACATTGGGCTaGTTGGTAAAGGCCTCTTTCAATCCAGGTCCTTGGGCTTGCACC +
Preference number: 6 (lower is better)
Translates to: PPIPAPLVTTVKTLG*LVKASFNPGPWACT
Trigger: GGTGCAAGCCCAAGGACCTGGATTGAAAGAGGCCTTTACCAACAAGCCCAATGTCTTCACCGTGGTTACCAGAGGCGCAGGAATTGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CAA 90 bp ATTCTACAAGCCAGTGAGGCCGGGATTTGGGAATGCGGCTGCCCATaGTGGTATGGGCTTTGTCTAAGTGGCTCCAGACCCAGGGTAGAA +
Preference number: 6 (lower is better)
Translates to: ILQASEAGIWECGCP*WYGLCLSGSRPRVE
Trigger: TTCTACCCTGGGTCTGGAGCCACTTAGACAAAGCCCATACCACAATGGGCAGCCGCATTCCCAAATCCCGGCCTCACTGGCTTGTAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684439.1
CDS TCA 72 bp GATAAGGAGAAAGTGGGATGTCGTCACCCCCGTAGGTaGCTCCAATCATATAGCGCCCAGTCTTGTCGGGGA +
Preference number: 6 (lower is better)
Translates to: DKEKVGCRHPRR*LQSYSAQSCRG
Trigger: TCCCCGACAAGACTGGGCGCTATATGATTGGAGTCACCTACGGGGGTGACGACATCCCACTTTCTCCTTATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000481470.5
ENST00000490882.5
ENST00000493452.5
ENST00000682297.1
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS TCA 72 bp ACTCAGCTGAGAGCAAAGAGAAACCTGGTTAGTGACTaGGCCCCACAGAGCCCCTGTCCCTCTTCCATCCTT +
Preference number: 6 (lower is better)
Translates to: TQLRAKRNLVSD*APQSPCPSSIL
Trigger: AAGGATGGAAGAGGGACAGGGGCTCTGTGGGGCTCAGTCACTAACCAGGTTTCTCTTTGCTCTCAGCTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468939.1
CDS TCA 72 bp GAATTCACCAGCGTGGCCATCCTTCAAGAAAGCAGATaGCTGGAGGCACTGGGGTGTGGCAAGCTTGGAAGA +
Preference number: 6 (lower is better)
Translates to: EFTSVAILQESR*LEALGCGKLGR
Trigger: TCTTCCAAGCTTGCCACACCCCAGTGCCTCCAGTCATCTGCTTTCTTGAAGGATGGCCACGCTGGTGAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477629.1
ENST00000683114.1
CDS TCA 72 bp CGTTGGGTTGCAGAGTCCAGATCCCAGCTTCCAACGTaGCAGTCAAGGATGGGTCAACTCCAGGGTAGGTTA +
Preference number: 6 (lower is better)
Translates to: RWVAESRSQLPT*QSRMGQLQGRL
Trigger: TAACCTACCCTGGAGTTGACCCATCCTTGACTGTCACGTTGGAAGCTGGGATCTGGACTCTGCAACCCAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481470.5
ENST00000682868.1
CDS GCA 72 bp CAAGAGCAACTCCTTCTCTCAGCAGCGTCCAGCACTTaGAGAGCACAGCCTGAAACCCAAGCTCCCAAAAAG +
Preference number: 6 (lower is better)
Translates to: QEQLLLSAASST*RAQPETQAPKK
Trigger: CTTTTTGGGAGCTTGGGTTTCAGGCTGTGCTCTGCAAGTGCTGGACGCTGCTGAGAGAAGGAGTTGCTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS GCA 72 bp CAGAGCCCCTGTCCCTCTTCCATCCTTGTTCAAACCTaGAGTGCTAGGTTTCGTCTGTTGCTAGCCCTTTCC +
Preference number: 6 (lower is better)
Translates to: QSPCPSSILVQT*SARFRLLLALS
Trigger: GGAAAGGGCTAGCAACAGACGAAACCTAGCACTGCAGGTTTGAACAAGGATGGAAGAGGGACAGGGGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468939.1
CDS GCA 72 bp CTCAGTAGACTACCACCACAGAGCTGCTTCCCCCACTaGTCCATCTTGAACTGCAGTGAGCCACTCACTCTA +
Preference number: 6 (lower is better)
Translates to: LSRLPPQSCFPH*SILNCSEPLTL
Trigger: TAGAGTGAGTGGCTCACTGCAGTTCAAGATGGAGCAGTGGGGGAAGCAGCTCTGTGGTGGTAGTCTACTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000684439.1
CDS CCA 72 bp GGGATGTGGCTGCCCATGTATTTGATGTGCATCTCATaGAGCCCGACCTCAGTGGGGGCATATCTAACAGTG +
Preference number: 6 (lower is better)
Translates to: GMWLPMYLMCIS*SPTSVGAYLTV
Trigger: CACTGTTAGATATGCCCCCACTGAGGTCGGGCTCCATGAGATGCACATCAAATACATGGGCAGCCACATCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000481470.5
ENST00000490882.5
ENST00000493452.5
ENST00000682297.1
ENST00000684439.1
ENST00000684506.1
ENST00000684607.1
CDS CCA 72 bp GGTGGCAGTTTTGTTGGCCACTCCATACACGAGGCCTaGACCGTATGCAGAAACACTTCCACTGTTGGGGTA +
Preference number: 6 (lower is better)
Translates to: GGSFVGHSIHEA*TVCRNTSTVGV
Trigger: TACCCCAACAGTGGAAGTGTTTCTGCATACGGTCCAGGCCTCGTGTATGGAGTGGCCAACAAAACTGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000481470.5
ENST00000490882.5
ENST00000493452.5
ENST00000682297.1
ENST00000682871.1
ENST00000683925.1
ENST00000684439.1
ENST00000684506.1
ENST00000684607.1
CDS CCA 72 bp AAACCCCTAGGATCCCACCCCCATACAACTAGGATCTaGCTTTCTGGGCAAATGGATGAGTCTGGCCTTGGC +
Preference number: 6 (lower is better)
Translates to: KPLGSHPHTTRI*LSGQMDESGLG
Trigger: GCCAAGGCCAGACTCATCCATTTGCCCAGAAAGCCAGATCCTAGTTGTATGGGGGTGGGATCCTAGGGGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481470.5
CDS CCA 72 bp TGCAAATGTACAGCAGCACGCAGAGATGGCTTAGGGTaGCCAGGAGGCCAGGAAGCTAAAGGTATTGAGGCT +
Preference number: 6 (lower is better)
Translates to: CKCTAARRDGLG*PGGQEAKGIEA
Trigger: AGCCTCAATACCTTTAGCTTCCTGGCCTCCTGGCCACCCTAAGCCATCTCTGCGTGCTGCTGTACATTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682987.1
ENST00000683511.1
CDS CCA 72 bp ACAACTGGCATCTTGACGTCCACCTCTCTACAGGTCTaGCGCCTCCTAAGCAGAGGCATGAAGAGACAGAAG +
Preference number: 6 (lower is better)
Translates to: TTGILTSTSLQV*RLLSRGMKRQK
Trigger: CTTCTGTCTCTTCATGCCTCTGCTTAGGAGGCGCCAGACCTGTAGAGAGGTGGACGTCAAGATGCCAGTTGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683925.1
CDS CAA 72 bp CCGGTGACCTTGGGCAGATACTCCACAGAGTATGTCTaGTTCTTGTCACTGTCAGGGGTCACTTGTGCCTCC +
Preference number: 6 (lower is better)
Translates to: PVTLGRYSTEYV*FLSLSGVTCAS
Trigger: GGAGGCACAAGTGACCCCTGACAGTGACAAGAACAAGACATACTCTGTGGAGTATCTGCCCAAGGTCACCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682097.1
ENST00000682868.1
ENST00000682871.1
ENST00000682987.1
ENST00000683511.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS CAA 72 bp ATGTTCACGCCTCCCCAGACCACAGCAATGGTGTGCTaGATGGCCTTCACCGGGGTGTATGAGCATGCATAT +
Preference number: 6 (lower is better)
Translates to: MFTPPQTTAMVC*MAFTGVYEHAY
Trigger: ATATGCATGCTCATACACCCCGGTGAAGGCCATCAAGCACACCATTGCTGTGGTCTGGGGAGGCGTGAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS CAA 72 bp CCTGCGCCTCTGGTAACCACGGTGAAGACATTGGGCTaGTTGGTAAAGGCCTCTTTCAATCCAGGTCCTTGG +
Preference number: 6 (lower is better)
Translates to: PAPLVTTVKTLG*LVKASFNPGPW
Trigger: CCAAGGACCTGGATTGAAAGAGGCCTTTACCAACAAGCCCAATGTCTTCACCGTGGTTACCAGAGGCGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CAA 72 bp GCCTTCCCTGTGACAAGAGCAATATTTACACAGGGTTaGAAGCAGGCGGTTCTGTACCTCTCCCCTCCTGGC +
Preference number: 6 (lower is better)
Translates to: AFPVTRAIFTQG*KQAVLYLSPPG
Trigger: GCCAGGAGGGGAGAGGTACAGAACCGCCTGCTTCAAACCCTGTGTAAATATTGCTCTTGTCACAGGGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CAA 90 bp CCAGGCTGCATGGGTTTGTACACACATCGATACACCTGGTTTCCTTaGTCTTCCACGAGCAACTCCACGGTGTTCTTCCCCTGGGGATCT +
Preference number: 6 (lower is better)
Translates to: PGCMGLYTHRYTWFP*SSTSNSTVFFPWGS
Trigger: AGATCCCCAGGGGAAGAACACCGTGGAGTTGCTCGTGGAAGACAAAGGAAACCAGGTGTATCGATGTGTGTACAAACCCATGCAGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682097.1
ENST00000682868.1
ENST00000682871.1
ENST00000682987.1
ENST00000683511.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS CAA 90 bp CCAATTCCTGCGCCTCTGGTAACCACGGTGAAGACATTGGGCTTGTaGGTAAAGGCCTCTTTCAATCCAGGTCCTTGGGCTTGCACCCTA +
Preference number: 6 (lower is better)
Translates to: PIPAPLVTTVKTLGL*VKASFNPGPWACTL
Trigger: TAGGGTGCAAGCCCAAGGACCTGGATTGAAAGAGGCCTTTACCAACAAGCCCAATGTCTTCACCGTGGTTACCAGAGGCGCAGGAATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CAA 90 bp TCTGGGGTCAGAACCGTGCAGGTCACTTTACCCTTCCCGGCAGTCTaGGCATCAACCACAAAGCCTACTTCTTCGCCAGTTTTCACAGTG +
Preference number: 6 (lower is better)
Translates to: SGVRTVQVTLPFPAV*ASTTKPTSSPVFTV
Trigger: CACTGTGAAAACTGGCGAAGAAGTAGGCTTTGTGGTTGATGCCAAGACTGCCGGGAAGGGTAAAGTGACCTGCACGGTTCTGACCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000481470.5
ENST00000490882.5
ENST00000493452.5
ENST00000682297.1
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS TCA 72 bp GATCCATCATTCTGGTCGTTGTACTCAATCTTTGCCTaGGAGGGGCCTTCAATGGCAAACCCCAGAGACCCC +
Preference number: 6 (lower is better)
Translates to: DPSFWSLYSIFA*EGPSMANPRDP
Trigger: GGGGTCTCTGGGGTTTGCCATTGAAGGCCCCTCTCAGGCAAAGATTGAGTACAACGACCAGAATGATGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682097.1
ENST00000682868.1
ENST00000682871.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS TCA 72 bp GGGCTGTCCTTGATGTCTTCGTCGTCACACATGATGTaGACAGCATATTCGCCAGGCTCCTTGGGCCAGTAT +
Preference number: 6 (lower is better)
Translates to: GLSLMSSSSHMM*TAYSPGSLGQY
Trigger: ATACTGGCCCAAGGAGCCTGGCGAATATGCTGTTCACATCATGTGTGACGACGAAGACATCAAGGACAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682097.1
ENST00000682868.1
ENST00000682871.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS TCA 72 bp AGCAATGGTGTGCTTGATGGCCTTCACCGGGGTGTATaGGCATGCATATGTGCCGTCCATCCGGTTCTTCAT +
Preference number: 6 (lower is better)
Translates to: SNGVLDGLHRGV*ACICAVHPVLH
Trigger: ATGAAGAACCGGATGGACGGCACATATGCATGCTCATACACCCCGGTGAAGGCCATCAAGCACACCATTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS TCA 72 bp AGACACGACGGCTGGCGATTCGTGGAGCACGGATGGTaGCGCAAAGGTGATCTTATTACAGAAAAAGCAGGG +
Preference number: 6 (lower is better)
Translates to: RHDGWRFVEHGW*RKGDLITEKAG
Trigger: CCCTGCTTTTTCTGTAATAAGATCACCTTTGCGTCACCATCCGTGCTCCACGAATCGCCAGCCGTCGTGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000684439.1
CDS GCA 72 bp TTTACGCATGTGGTATGGAATCCTTTCCGTGATTCCTaGTTCACAAATGACTCTGCGGCTCAGGGAGGGGGC +
Preference number: 6 (lower is better)
Translates to: FTHVVWNPFRDS*FTNDSAAQGGG
Trigger: GCCCCCTCCCTGAGCCGCAGAGTCATTTGTGAAGCAGGAATCACGGAAAGGATTCCATACCACATGCGTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS GCA 72 bp AATCATTGCACCAGCAGGCCCATGACCACTGCTCAGTaGTTGGCTGCTCTTCCCTCCTTCCACCTAATTCTA +
Preference number: 6 (lower is better)
Translates to: NHCTSRPMTTAQ*LAALPSFHLIL
Trigger: TAGAATTAGGTGGAAGGAGGGAAGAGCAGCCAAGCACTGAGCAGTGGTCATGGGCCTGCTGGTGCAATGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS GCA 72 bp AGCTCTGTGAGCGACATTTGGAACAGCCCTATCCTCTaGCTGCACAGGTTGGAGCTATGCAGGGACATATCA +
Preference number: 6 (lower is better)
Translates to: SSVSDIWNSPIL*LHRLELCRDIS
Trigger: TGATATGTCCCTGCATAGCTCCAACCTGTGCAGGCAGAGGATAGGGCTGTTCCAAATGTCGCTCACAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS GCA 72 bp TGGAAGGATACACTCAGTAGACTACCACCACAGAGCTaGTTCCCCCACTGCTCCATCTTGAACTGCAGTGAG +
Preference number: 6 (lower is better)
Translates to: WKDTLSRLPPQS*FPHCSILNCSE
Trigger: CTCACTGCAGTTCAAGATGGAGCAGTGGGGGAAGCAGCTCTGTGGTGGTAGTCTACTGAGTGTATCCTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000684439.1
CDS GCA 72 bp CAACCTGTAAGGAATCAACCCCACAGTGGTCTTCTCTaGCCACCCCGACTCCTAGCCCTATGTAAGCACTTT +
Preference number: 6 (lower is better)
Translates to: QPVRNQPHSGLL*PPRLLALCKHF
Trigger: AAAGTGCTTACATAGGGCTAGGAGTCGGGGTGGGCAGAGAAGACCACTGTGGGGTTGATTCCTTACAGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683925.1
CDS CCA 72 bp CCAGGCTGCATGGGTTTGTACACACATCGATACACCTaGTTTCCTTTGTCTTCCACGAGCAACTCCACGGTG +
Preference number: 6 (lower is better)
Translates to: PGCMGLYTHRYT*FPLSSTSNSTV
Trigger: CACCGTGGAGTTGCTCGTGGAAGACAAAGGAAACCAGGTGTATCGATGTGTGTACAAACCCATGCAGCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682097.1
ENST00000682868.1
ENST00000682871.1
ENST00000682987.1
ENST00000683511.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS CCA 72 bp GCAGCCTTCAGTGACAGCCACCTTGAAGGGACTGTTTaGGATAGGCACGTCATCATATGTCACCTCCACTAC +
Preference number: 6 (lower is better)
Translates to: AAFSDSHLEGTV*DRHVIICHLHY
Trigger: GTAGTGGAGGTGACATATGATGACGTGCCTATCCCAAACAGTCCCTTCAAGGTGGCTGTCACTGAAGGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CCA 72 bp TCCTCCCAGCTGACTGCTTTTTGGGGGAGTGTTGTTTaGGGAGTGACTCAACCTCTGCATCTCACTTTCCAC +
Preference number: 6 (lower is better)
Translates to: SSQLTAFWGSVV*GVTQPLHLTFH
Trigger: GTGGAAAGTGAGATGCAGAGGTTGAGTCACTCCCCAAACAACACTCCCCCAAAAAGCAGTCAGCTGGGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CCA 72 bp AGAGGGAGGTTTGCTTTGTTCAGAAGGTCAGGATACTaGGCGCTCTGGCGGCCAAGCACAGATACCTTTTCA +
Preference number: 6 (lower is better)
Translates to: RGRFALFRRSGY*ALWRPSTDTFS
Trigger: TGAAAAGGTATCTGTGCTTGGCCGCCAGAGCGCCCAGTATCCTGACCTTCTGAACAAAGCAAACCTCCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419752.4
ENST00000484981.1
CDS CAA 72 bp GCATCCTTAGGATCCACAGTGAACTCGGCCAGGTTGTaGACAATGCATCCAGATTTCTCCAAACCTGGCCCG +
Preference number: 6 (lower is better)
Translates to: ASLGSTVNSARL*TMHPDFSKPGP
Trigger: CGGGCCAGGTTTGGAGAAATCTGGATGCATTGTCAACAACCTGGCCGAGTTCACTGTGGATCCTAAGGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS CAA 72 bp AACACATCTTTCCCTTCTATTCCTGGTCCAAAGACTTaGATCCTGCTGGTGTCCACGGCGGGCTCCACCTTG +
Preference number: 6 (lower is better)
Translates to: NTSFPSIPGPKT*ILLVSTAGSTL
Trigger: CAAGGTGGAGCCCGCCGTGGACACCAGCAGGATCAAAGTCTTTGGACCAGGAATAGAAGGGAAAGATGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CAA 72 bp ACCCTAGATGGCTGGCAGCCTTCAGTGACAGCCACCTaGAAGGGACTGTTTGGGATAGGCACGTCATCATAT +
Preference number: 6 (lower is better)
Translates to: TLDGWQPSVTAT*KGLFGIGTSSY
Trigger: ATATGATGACGTGCCTATCCCAAACAGTCCCTTCAAGGTGGCTGTCACTGAAGGCTGCCAGCCATCTAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CAA 72 bp AGAACCGTGCAGGTCACTTTACCCTTCCCGGCAGTCTaGGCATCAACCACAAAGCCTACTTCTTCGCCAGTT +
Preference number: 6 (lower is better)
Translates to: RTVQVTLPFPAV*ASTTKPTSSPV
Trigger: AACTGGCGAAGAAGTAGGCTTTGTGGTTGATGCCAAGACTGCCGGGAAGGGTAAAGTGACCTGCACGGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000481470.5
ENST00000490882.5
ENST00000493452.5
ENST00000682297.1
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CAA 72 bp GCACACTGGGGTTCCTGGACCATTTCATTAGGAAAATaGCTCAGCGGCTCCAAAGAATCTGGAGCTCCCTGG +
Preference number: 6 (lower is better)
Translates to: AHWGSWTISLGK*LSGSKESGAPW
Trigger: CCAGGGAGCTCCAGATTCTTTGGAGCCGCTGAGCAATTTTCCTAATGAAATGGTCCAGGAACCCCAGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CAA 72 bp ACCATGGTCTTGGCCAATCAACCCAACATTCTTTGCTaGGAGAGACGCTGGGAAGCTGAGAACAAGGGTGGG +
Preference number: 6 (lower is better)
Translates to: TMVLANQPNILC*ERRWEAENKGG
Trigger: CCCACCCTTGTTCTCAGCTTCCCAGCGTCTCTCCAAGCAAAGAATGTTGGGTTGATTGGCCAAGACCATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683114.1
CDS CAA 90 bp AGCCCGGTGACCTTGGGCAGATACTCCACAGAGTATGTCTTGTTCTaGTCACTGTCAGGGGTCACTTGTGCCTCCTCTTTGTTCCCTTCT +
Preference number: 6 (lower is better)
Translates to: SPVTLGRYSTEYVLF*SLSGVTCASSLFPS
Trigger: AGAAGGGAACAAAGAGGAGGCACAAGTGACCCCTGACAGTGACAAGAACAAGACATACTCTGTGGAGTATCTGCCCAAGGTCACCGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682097.1
ENST00000682868.1
ENST00000682871.1
ENST00000682987.1
ENST00000683511.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS CAA 90 bp TTGTGTAGCCCGGTGACCTTGGGCAGATACTCCACAGAGTATGTCTaGTTCTTGTCACTGTCAGGGGTCACTTGTGCCTCCTCTTTGTTC +
Preference number: 6 (lower is better)
Translates to: LCSPVTLGRYSTEYV*FLSLSGVTCASSLF
Trigger: GAACAAAGAGGAGGCACAAGTGACCCCTGACAGTGACAAGAACAAGACATACTCTGTGGAGTATCTGCCCAAGGTCACCGGGCTACACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682097.1
ENST00000682868.1
ENST00000682871.1
ENST00000682987.1
ENST00000683511.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS CAA 90 bp AACCCTGGACCTTTTGCAGTGACTTTACTGGCATCTCCCTGGGCCTaGTCAACACTCACTTCAAATGGGCTCTTGGAGATGTGCTGTCCT +
Preference number: 6 (lower is better)
Translates to: NPGPFAVTLLASPWA*STLTSNGLLEMCCP
Trigger: AGGACAGCACATCTCCAAGAGCCCATTTGAAGTGAGTGTTGACAAGGCCCAGGGAGATGCCAGTAAAGTCACTGCAAAAGGTCCAGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682097.1
ENST00000682868.1
ENST00000682871.1
ENST00000682987.1
ENST00000683511.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS CAA 90 bp GCTTTTCCAGCATCCTTAGGATCCACAGTGAACTCGGCCAGGTTGTaGACAATGCATCCAGATTTCTCCAAACCTGGCCCGTATGCTCGA +
Preference number: 6 (lower is better)
Translates to: AFPASLGSTVNSARL*TMHPDFSKPGPYAR
Trigger: TCGAGCATACGGGCCAGGTTTGGAGAAATCTGGATGCATTGTCAACAACCTGGCCGAGTTCACTGTGGATCCTAAGGATGCTGGAAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS CAA 90 bp GGAGCTTTTCCAGCATCCTTAGGATCCACAGTGAACTCGGCCAGGTaGTTGACAATGCATCCAGATTTCTCCAAACCTGGCCCGTATGCT +
Preference number: 6 (lower is better)
Translates to: GAFPASLGSTVNSAR*LTMHPDFSKPGPYA
Trigger: AGCATACGGGCCAGGTTTGGAGAAATCTGGATGCATTGTCAACAACCTGGCCGAGTTCACTGTGGATCCTAAGGATGCTGGAAAAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS CAA 90 bp TCCTTCCCAACTTCCACCCTGTTTTCCAGCCCATTGAGTTTTATCTaGCTCAGATCCAGCGGTGCAGCAACACCCACAGTGAAAGGGCTT +
Preference number: 6 (lower is better)
Translates to: SFPTSTLFSSPLSFI*LRSSGAATPTVKGL
Trigger: AAGCCCTTTCACTGTGGGTGTTGCTGCACCGCTGGATCTGAGCAAGATAAAACTCAATGGGCTGGAAAACAGGGTGGAAGTTGGGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CAA 90 bp TCCCCCGGTGCGAAAGGAATGTACTCAGCACTGCAGCTGCCATCCTaGTTGTCTCTGCAATTTATCTTCGACTCTGATGGTCCCTCAACA +
Preference number: 6 (lower is better)
Translates to: SPGAKGMYSALQLPS*LSLQFIFDSDGPST
Trigger: TGTTGAGGGACCATCAGAGTCGAAGATAAATTGCAGAGACAACAAGGATGGCAGCTGCAGTGCTGAGTACATTCCTTTCGCACCGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CAA 90 bp CTGGGGCAGAGACCTCTAGTCATGCCCAGTTTCAACGTTCCCACTTaGAGGGGACTCAGAATCTTTACCACGGACAACATTTGCCCTAGA +
Preference number: 6 (lower is better)
Translates to: LGQRPLVMPSFNVPT*RGLRIFTTDNICPR
Trigger: TCTAGGGCAAATGTTGTCCGTGGTAAAGATTCTGAGTCCCCTCAAAGTGGGAACGTTGAAACTGGGCATGACTAGAGGTCTCTGCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682097.1
CDS TCA 72 bp AGTCTCTCACCACTGCCTCTAGCTATAACCTGTATCTaGCACCACAAAACATCTCTGGGCGTGGCGGTCTTC +
Preference number: 6 (lower is better)
Translates to: SLSPLPLAITCI*HHKTSLGVAVF
Trigger: GAAGACCGCCACGCCCAGAGATGTTTTGTGGTGTCAGATACAGGTTATAGCTAGAGGCAGTGGTGAGAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS TCA 72 bp AAGAGTTTCCTTTTAACAACTCATCCAGGGCAGCCCTaGTGCTGGGGACAATGGATTGACGCACTCCACGTG +
Preference number: 6 (lower is better)
Translates to: KSFLLTTHPGQP*CWGQWIDALHV
Trigger: CACGTGGAGTGCGTCAATCCATTGTCCCCAGCATCAGGGCTGCCCTGGATGAGTTGTTAAAAGGAAACTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491408.1
CDS TCA 72 bp CCCAAGACACACTCTCTCTCTGGGGAACTAAGACAATaGCAAAGCCACGTATCACGTGCATCATGTGCCTGG +
Preference number: 6 (lower is better)
Translates to: PKTHSLSGELRQ*QSHVSRASCAW
Trigger: CCAGGCACATGATGCACGTGATACGTGGCTTTGTCATTGTCTTAGTTCCCCAGAGAGAGAGTGTGTCTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS TCA 72 bp CTTATTACAGAAAAAGCAGGGATCATCGTGATGGGCTaGTCAGTGAGGGGCACACCAATGACCAGGACACCC +
Preference number: 6 (lower is better)
Translates to: LITEKAGIIVMG*SVRGTPMTRTP
Trigger: GGGTGTCCTGGTCATTGGTGTGCCCCTCACTGATCAGCCCATCACGATGATCCCTGCTTTTTCTGTAATAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684439.1
CDS GCA 72 bp TTTGTTGGCCACTCCATACACGAGGCCTGGACCGTATaGAGAAACACTTCCACTGTTGGGGTAGTTCACGTA +
Preference number: 6 (lower is better)
Translates to: FVGHSIHEAWTV*RNTSTVGVVHV
Trigger: TACGTGAACTACCCCAACAGTGGAAGTGTTTCTGCATACGGTCCAGGCCTCGTGTATGGAGTGGCCAACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000481470.5
ENST00000490882.5
ENST00000493452.5
ENST00000682297.1
ENST00000682871.1
ENST00000683925.1
ENST00000684439.1
ENST00000684506.1
ENST00000684607.1
CDS GCA 72 bp TATCTCAATGAGTTATCACCTCCAAACCCCACCATCTaGCACATCCAGAGCAACCCACCCCCTCACAAATGC +
Preference number: 6 (lower is better)
Translates to: YLNELSPPNPTI*HIQSNPPPHKC
Trigger: GCATTTGTGAGGGGGTGGGTTGCTCTGGATGTGGCAGATGGTGGGGTTTGGAGGTGATAACTCATTGAGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS CCA 72 bp CCTGGACCTTTTGCAGTGACTTTACTGGCATCTCCCTaGGCCTTGTCAACACTCACTTCAAATGGGCTCTTG +
Preference number: 6 (lower is better)
Translates to: PGPFAVTLLASP*ALSTLTSNGLL
Trigger: CAAGAGCCCATTTGAAGTGAGTGTTGACAAGGCCCAGGGAGATGCCAGTAAAGTCACTGCAAAAGGTCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682097.1
ENST00000682868.1
ENST00000682871.1
ENST00000682987.1
ENST00000683511.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS CCA 72 bp CAGGTTGTTGACAATGCATCCAGATTTCTCCAAACCTaGCCCGTATGCTCGAACCAGATCAGGGTTGTAGCC +
Preference number: 6 (lower is better)
Translates to: QVVDNASRFLQT*PVCSNQIRVVA
Trigger: GGCTACAACCCTGATCTGGTTCGAGCATACGGGCCAGGTTTGGAGAAATCTGGATGCATTGTCAACAACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS CCA 72 bp AGGTTCATTTGCCTTCAGACCACTTCTCTCCACACCTaGCCCAAACACTTTGACCTTCTGAGGATGGCTACC +
Preference number: 6 (lower is better)
Translates to: RFICLQTTSLHT*PKHFDLLRMAT
Trigger: GGTAGCCATCCTCAGAAGGTCAAAGTGTTTGGGCCAGGTGTGGAGAGAAGTGGTCTGAAGGCAAATGAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS CCA 72 bp TTCATTAGGAAAATTGCTCAGCGGCTCCAAAGAATCTaGAGCTCCCTGGTCTATCTCCCAGCCTCTCAAGCC +
Preference number: 6 (lower is better)
Translates to: FIRKIAQRLQRI*SSLVYLPASQA
Trigger: GGCTTGAGAGGCTGGGAGATAGACCAGGGAGCTCCAGATTCTTTGGAGCCGCTGAGCAATTTTCCTAATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CCA 72 bp AAGGAAGGAGGCCCTTCTGGTATACCCCGAGCACACTaGGGTTCCTGGACCATTTCATTAGGAAAATTGCTC +
Preference number: 6 (lower is better)
Translates to: KEGGPSGIPRAH*GSWTISLGKLL
Trigger: GAGCAATTTTCCTAATGAAATGGTCCAGGAACCCCAGTGTGCTCGGGGTATACCAGAAGGGCCTCCTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CCA 72 bp GGCTCCAGGTCCTGTGCACAGCACCATTTACGCATGTaGTATGGAATCCTTTCCGTGATTCCTGCTTCACAA +
Preference number: 6 (lower is better)
Translates to: GSRSCAQHHLRM*YGILSVIPASQ
Trigger: TTGTGAAGCAGGAATCACGGAAAGGATTCCATACCACATGCGTAAATGGTGCTGTGCACAGGACCTGGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CCA 72 bp GCAAGTTCCAATGCACTTCAGGGCTTTGTCCCTATATaGCCCGCTAGCCTTACCAAACCCAAGTTCCAAGCT +
Preference number: 6 (lower is better)
Translates to: ASSNALQGFVPI*PASLTKPKFQA
Trigger: AGCTTGGAACTTGGGTTTGGTAAGGCTAGCGGGCCATATAGGGACAAAGCCCTGAAGTGCATTGGAACTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS CAA 72 bp CACACGATCCATCATTCTGGTCGTTGTACTCAATCTTaGCCTGAGAGGGGCCTTCAATGGCAAACCCCAGAG +
Preference number: 6 (lower is better)
Translates to: HTIHHSGRCTQS*PERGLQWQTPE
Trigger: CTCTGGGGTTTGCCATTGAAGGCCCCTCTCAGGCAAAGATTGAGTACAACGACCAGAATGATGGATCGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682097.1
ENST00000682868.1
ENST00000682871.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS CAA 72 bp CCAGCATCCTTAGGATCCACAGTGAACTCGGCCAGGTaGTTGACAATGCATCCAGATTTCTCCAAACCTGGC +
Preference number: 6 (lower is better)
Translates to: PASLGSTVNSAR*LTMHPDFSKPG
Trigger: GCCAGGTTTGGAGAAATCTGGATGCATTGTCAACAACCTGGCCGAGTTCACTGTGGATCCTAAGGATGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS CAA 72 bp CCAATTCCTGCGCCTCTGGTAACCACGGTGAAGACATaGGGCTTGTTGGTAAAGGCCTCTTTCAATCCAGGT +
Preference number: 6 (lower is better)
Translates to: PIPAPLVTTVKT*GLLVKASFNPG
Trigger: ACCTGGATTGAAAGAGGCCTTTACCAACAAGCCCAATGTCTTCACCGTGGTTACCAGAGGCGCAGGAATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CAA 72 bp ACCTTCCCAATATGGTCTTCTCTTACCCCCAAATCATaGCACCAGCAGGCCCATGACCACTGCTCAGTGCTT +
Preference number: 6 (lower is better)
Translates to: TFPIWSSLTPKS*HQQAHDHCSVL
Trigger: AAGCACTGAGCAGTGGTCATGGGCCTGCTGGTGCAATGATTTGGGGGTAAGAGAAGACCATATTGGGAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS CAA 72 bp CGAAGGACACTTTCTTACTGCCCTTTTGGAAGGCAGTaGGTGTCCTCTCTTCAACTGTCAGATGCGCATGCC +
Preference number: 6 (lower is better)
Translates to: RRTLSYCPFGRQ*VSSLQLSDAHA
Trigger: GGCATGCGCATCTGACAGTTGAAGAGAGGACACCAACTGCCTTCCAAAAGGGCAGTAAGAAAGTGTCCTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684439.1
CDS CAA 90 bp CCCGGTGCGAAAGGAATGTACTCAGCACTGCAGCTGCCATCCTTGTaGTCTCTGCAATTTATCTTCGACTCTGATGGTCCCTCAACAGTT +
Preference number: 6 (lower is better)
Translates to: PGAKGMYSALQLPSL*SLQFIFDSDGPSTV
Trigger: AACTGTTGAGGGACCATCAGAGTCGAAGATAAATTGCAGAGACAACAAGGATGGCAGCTGCAGTGCTGAGTACATTCCTTTCGCACCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CAA 90 bp AGAGATACAGCAAACTCACCCATTAAAAACAGAGGGAGGTTTGCTTaGTTCAGAAGGTCAGGATACTGGGCGCTCTGGCGGCCAAGCACA +
Preference number: 6 (lower is better)
Translates to: RDTANSPIKNRGRFA*FRRSGYWALWRPST
Trigger: TGTGCTTGGCCGCCAGAGCGCCCAGTATCCTGACCTTCTGAACAAAGCAAACCTCCCTCTGTTTTTAATGGGTGAGTTTGCTGTATCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CAA 90 bp AGCCAAGAGATACAGCAAACTCACCCATTAAAAACAGAGGGAGGTTaGCTTTGTTCAGAAGGTCAGGATACTGGGCGCTCTGGCGGCCAA +
Preference number: 6 (lower is better)
Translates to: SQEIQQTHPLKTEGG*LCSEGQDTGRSGGQ
Trigger: TTGGCCGCCAGAGCGCCCAGTATCCTGACCTTCTGAACAAAGCAAACCTCCCTCTGTTTTTAATGGGTGAGTTTGCTGTATCTCTTGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CAA 90 bp CAAAAATTAACCAATGGGCTGGCTAGTCAAGACTTGTGGCCACCTTaGAGCAAAGAACACTGTGGTACCAGCATGCTGGGGCATAGGTGC +
Preference number: 6 (lower is better)
Translates to: QKLTNGLASQDLWPP*SKEHCGTSMLGHRC
Trigger: GCACCTATGCCCCAGCATGCTGGTACCACAGTGTTCTTTGCTCAAAGGTGGCCACAAGTCTTGACTAGCCAGCCCATTGGTTAATTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481470.5
ENST00000682868.1
CDS CAA 90 bp AAGAATTCCGACTGGATACCCATTAAAAACAGAGGGAGGTTTGCTTaGTTCAGAAGGTCAGGATACTGGGCGCTCTGGCGGCCAAGCACA +
Preference number: 6 (lower is better)
Translates to: KNSDWIPIKNRGRFA*FRRSGYWALWRPST
Trigger: TGTGCTTGGCCGCCAGAGCGCCCAGTATCCTGACCTTCTGAACAAAGCAAACCTCCCTCTGTTTTTAATGGGTATCCAGTCGGAATTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484981.1
CDS CAA 90 bp CAGCCAGGCTGGCTCAGACTTGATGCTTATCAGCCTGCTAAGGGTTaGAGAGGACACTCTTGGAAACATTGCTCCAACTTAAGAGACACG +
Preference number: 6 (lower is better)
Translates to: QPGWLRLDAYQPAKG*RGHSWKHCSNLRDT
Trigger: CGTGTCTCTTAAGTTGGAGCAATGTTTCCAAGAGTGTCCTCTCAAACCCTTAGCAGGCTGATAAGCATCAAGTCTGAGCCAGCCTGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682097.1
CDS CAA 90 bp CAACCCATCTGCTCTCCATTCAGGCACTTACTGTTTTCCAGCCCATaGAGTTTTATCTTGCTCAGATCCAGCGGTGCAGCAACACCCACA +
Preference number: 6 (lower is better)
Translates to: QPICSPFRHLLFSSP*SFILLRSSGAATPT
Trigger: TGTGGGTGTTGCTGCACCGCTGGATCTGAGCAAGATAAAACTCAATGGGCTGGAAAACAGTAAGTGCCTGAATGGAGAGCAGATGGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684107.1
CDS CAA 90 bp CAGCAAACCCTTCTGTTGGAGATGTGGCAACATGTGGCAAAAGCCTaGAACCAACACCCACTCTTAGCACCACCAAATCCACTTCTGGGT +
Preference number: 6 (lower is better)
Translates to: QQTLLLEMWQHVAKA*NQHPLLAPPNPLLG
Trigger: ACCCAGAAGTGGATTTGGTGGTGCTAAGAGTGGGTGTTGGTTCAAGGCTTTTGCCACATGTTGCCACATCTCCAACAGAAGGGTTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683511.1
CDS TCA 72 bp ATATGCCACCATAACCTGCATCCCTTGTGTCCACGATaGAGTCAGACATCTCGAAAGTCCGGCCTTCTGACA +
Preference number: 6 (lower is better)
Translates to: ICHHNLHPLCPR*SQTSRKSGLLT
Trigger: TGTCAGAAGGCCGGACTTTCGAGATGTCTGACTTCATCGTGGACACAAGGGATGCAGGTTATGGTGGCATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000481470.5
ENST00000490882.5
ENST00000493452.5
ENST00000682297.1
ENST00000682871.1
ENST00000683925.1
ENST00000684439.1
ENST00000684506.1
ENST00000684607.1
CDS TCA 72 bp TTAACTAAAGCCAAGAAGGCGGAGTCGACAGCTCCGTaGCTCGTTAGGAAGGATGGGAGATGCAGTGTAGAA +
Preference number: 6 (lower is better)
Translates to: LTKAKKAESTAP*LVRKDGRCSVE
Trigger: TTCTACACTGCATCTCCCATCCTTCCTAACGAGTCACGGAGCTGTCGACTCCGCCTTCTTGGCTTTAGTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477629.1
CDS TCA 72 bp AATGAGAGAATAAAGACCCAAACCAGGTACTGTAGGTaGTCGTCCCTTTCTGCCTTCAGCAGTGGTCAGGGG +
Preference number: 6 (lower is better)
Translates to: NERIKTQTRYCR*SSLSAFSSGQG
Trigger: CCCCTGACCACTGCTGAAGGCAGAAAGGGACGATCACCTACAGTACCTGGTTTGGGTCTTTATTCTCTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS TCA 72 bp GTGACTTCTGAGTGCCAGGGATTTGGCATTTATGCTTaGCTCGCAACCTTAGTGCGGATTCAGTTGCCAAGG +
Preference number: 6 (lower is better)
Translates to: VTSECQGFGIYA*LATLVRIQLPR
Trigger: CCTTGGCAACTGAATCCGCACTAAGGTTGCGAGTCAAGCATAAATGCCAAATCCCTGGCACTCAGAAGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684107.1
CDS GCA 72 bp ACACGATCCATCATTCTGGTCGTTGTACTCAATCTTTaGCTGAGAGGGGCCTTCAATGGCAAACCCCAGAGA +
Preference number: 6 (lower is better)
Translates to: TRSIILVVVLNL*LRGAFNGKPQR
Trigger: TCTCTGGGGTTTGCCATTGAAGGCCCCTCTCAGGCAAAGATTGAGTACAACGACCAGAATGATGGATCGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682097.1
ENST00000682868.1
ENST00000682871.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS GCA 72 bp CAGCCCATTGAGTTTTATCTTGCTCAGATCCAGCGGTaGAGCAACACCCACAGTGAAAGGGCTTTTAGGGAT +
Preference number: 6 (lower is better)
Translates to: QPIEFYLAQIQR*SNTHSERAFRD
Trigger: ATCCCTAAAAGCCCTTTCACTGTGGGTGTTGCTGCACCGCTGGATCTGAGCAAGATAAAACTCAATGGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684107.1
ENST00000684506.1
ENST00000684607.1
CDS GCA 72 bp TGGGGAACTAAGACAATGACAAAGCCACGTATCACGTaGATCATGTGCCTGGCATTCCCAGAGGTTCTGGTA +
Preference number: 6 (lower is better)
Translates to: WGTKTMTKPRIT*IMCLAFPEVLV
Trigger: TACCAGAACCTCTGGGAATGCCAGGCACATGATGCACGTGATACGTGGCTTTGTCATTGTCTTAGTTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS GCA 72 bp GGCAATTTGGCAAGATCTGTCAAAATCATAGATGCCTaGACTGGGGCCCTAGCATTGCCTCCTCTGGTAACT +
Preference number: 6 (lower is better)
Translates to: GNLARSVKIIDA*TGALALPPLVT
Trigger: AGTTACCAGAGGAGGCAATGCTAGGGCCCCAGTGCAGGCATCTATGATTTTGACAGATCTTGCCAAATTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683925.1
CDS GCA 72 bp CCCCGACTCCTAGCCCTATGTAAGCACTTTCATTTCTaGAGTGTTCGGGTGCACATCAGGAAAAGACCTAAG +
Preference number: 6 (lower is better)
Translates to: PRLLALCKHFHF*SVRVHIRKRPK
Trigger: CTTAGGTCTTTTCCTGATGTGCACCCGAACACTGCAGAAATGAAAGTGCTTACATAGGGCTAGGAGTCGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683925.1
CDS GCA 72 bp GGGAAGGTAAGTGGAAAGGGCTTTTGGAAGGCCATTTaGCCATGCCATTCAACCTGTAAGGAATCAACCCCA +
Preference number: 6 (lower is better)
Translates to: GKVSGKGFWKAI*PCHSTCKESTP
Trigger: TGGGGTTGATTCCTTACAGGTTGAATGGCATGGGCAAATGGCCTTCCAAAAGCCCTTTCCACTTACCTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683925.1
CDS CCA 72 bp TTTGCTTTGTTCAGAAGGTCAGGATACTGGGCGCTCTaGCGGCCAAGCACAGATACCTTTTCATTCCATGCA +
Preference number: 6 (lower is better)
Translates to: FALFRRSGYWAL*RPSTDTFSFHA
Trigger: TGCATGGAATGAAAAGGTATCTGTGCTTGGCCGCCAGAGCGCCCAGTATCCTGACCTTCTGAACAAAGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419752.4
ENST00000484981.1
CDS CCA 72 bp CAAAATTGGTGCTCATTAAGGGGTGAACGAAGACCCTaGACAACTGGCATCTTGACGTCCACCTCTCTACAG +
Preference number: 6 (lower is better)
Translates to: QNWCSLRGERRP*TTGILTSTSLQ
Trigger: CTGTAGAGAGGTGGACGTCAAGATGCCAGTTGTCCAGGGTCTTCGTTCACCCCTTAATGAGCACCAATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683925.1
CDS CAA 72 bp ACCTTGGGCAGATACTCCACAGAGTATGTCTTGTTCTaGTCACTGTCAGGGGTCACTTGTGCCTCCTCTTTG +
Preference number: 6 (lower is better)
Translates to: TLGRYSTEYVLF*SLSGVTCASSL
Trigger: CAAAGAGGAGGCACAAGTGACCCCTGACAGTGACAAGAACAAGACATACTCTGTGGAGTATCTGCCCAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682097.1
ENST00000682868.1
ENST00000682871.1
ENST00000682987.1
ENST00000683511.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS CAA 72 bp GCAAAGAGGACTGTGACTTTGTGTAGCCCGGTGACCTaGGGCAGATACTCCACAGAGTATGTCTTGTTCTTG +
Preference number: 6 (lower is better)
Translates to: AKRTVTLCSPVT*GRYSTEYVLFL
Trigger: CAAGAACAAGACATACTCTGTGGAGTATCTGCCCAAGGTCACCGGGCTACACAAAGTCACAGTCCTCTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682097.1
ENST00000682868.1
ENST00000682871.1
ENST00000682987.1
ENST00000683511.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS CAA 72 bp ATGGGTTTGTACACACATCGATACACCTGGTTTCCTTaGTCTTCCACGAGCAACTCCACGGTGTTCTTCCCC +
Preference number: 6 (lower is better)
Translates to: MGLYTHRYTWFP*SSTSNSTVFFP
Trigger: GGGGAAGAACACCGTGGAGTTGCTCGTGGAAGACAAAGGAAACCAGGTGTATCGATGTGTGTACAAACCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682097.1
ENST00000682868.1
ENST00000682871.1
ENST00000682987.1
ENST00000683511.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS CAA 72 bp CTGGATACCTGGGAGAAAGGAATAGAAAATGCTGTGTaGATGACTTGGAGGGCTTTCCTGGGAGCACTGAGG +
Preference number: 6 (lower is better)
Translates to: LDTWEKGIENAV*MTWRAFLGALR
Trigger: CCTCAGTGCTCCCAGGAAAGCCCTCCAAGTCATCAACACAGCATTTTCTATTCCTTTCTCCCAGGTATCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CAA 72 bp AGGCACTTACTGTTTTCCAGCCCATTGAGTTTTATCTaGCTCAGATCCAGCGGTGCAGCAACACCCACAGTG +
Preference number: 6 (lower is better)
Translates to: RHLLFSSPLSFI*LRSSGAATPTV
Trigger: CACTGTGGGTGTTGCTGCACCGCTGGATCTGAGCAAGATAAAACTCAATGGGCTGGAAAACAGTAAGTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684107.1
CDS CAA 90 bp AGGTGGGAAAAGAGAAAGCAGGGGTTATGGGACAAGAGCTACTACTaGGCTGTTACCTCCTCTACAGCTCCAAACAAGCCTATTAGGTGG +
Preference number: 6 (lower is better)
Translates to: RWEKRKQGLWDKSYY*AVTSSTAPNKPIRW
Trigger: CCACCTAATAGGCTTGTTTGGAGCTGTAGAGGAGGTAACAGCCAAGTAGTAGCTCTTGTCCCATAACCCCTGCTTTCTCTTTTCCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CAA 90 bp CCAGTCTGGGCACAGACTGAGACTTCTCCTCCGGGTGCTATGTTCTaGCATGAAGATGGGGATTATCCATTCCTTGAAGAAGTGGTGTTA +
Preference number: 6 (lower is better)
Translates to: PVWAQTETSPPGAMF*HEDGDYPFLEEVVL
Trigger: TAACACCACTTCTTCAAGGAATGGATAATCCCCATCTTCATGCAAGAACATAGCACCCGGAGGAGAAGTCTCAGTCTGTGCCCAGACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493452.5
CDS CAA 90 bp TCTCCATTCAGGCACTTACTGTTTTCCAGCCCATTGAGTTTTATCTaGCTCAGATCCAGCGGTGCAGCAACACCCACAGTGAAAGGGCTT +
Preference number: 6 (lower is better)
Translates to: SPFRHLLFSSPLSFI*LRSSGAATPTVKGL
Trigger: AAGCCCTTTCACTGTGGGTGTTGCTGCACCGCTGGATCTGAGCAAGATAAAACTCAATGGGCTGGAAAACAGTAAGTGCCTGAATGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684107.1
CDS TCA 72 bp GGGACTGCGAGGAATCTCTTCATCAGCATATTTAACTaGGACCATGTAAGGTCCCTCCTGAGATGGGGTGTA +
Preference number: 6 (lower is better)
Translates to: GTARNLFISIFN*DHVRSLLRWGV
Trigger: TACACCCCATCTCAGGAGGGACCTTACATGGTCTCAGTTAAATATGCTGATGAAGAGATTCCTCGCAGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000481470.5
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS TCA 72 bp GGTCCTGCGAGGAATCTCTTCATCAGCATATTTAACTaGGACCATGTAAGGTCCCTCCTGAGATGGGGTGTA +
Preference number: 6 (lower is better)
Translates to: GPARNLFISIFN*DHVRSLLRWGV
Trigger: TACACCCCATCTCAGGAGGGACCTTACATGGTCTCAGTTAAATATGCTGATGAAGAGATTCCTCGCAGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682297.1
CDS TCA 72 bp CCCAAACTAACCCATGCTCCCTGCCTTATTCTGAGTTaGCCTAAAGAACTTCTAACAACTGGGGCAGAGACC +
Preference number: 6 (lower is better)
Translates to: PKLTHAPCLILS*PKELLTTGAET
Trigger: GGTCTCTGCCCCAGTTGTTAGAAGTTCTTTAGGTCAACTCAGAATAAGGCAGGGAGCATGGGTTAGTTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682097.1
CDS TCA 72 bp GCTCTCCATTCAGGCACTTACTGTTTTCCAGCCCATTaGGTTTTATCTTGCTCAGATCCAGCGGTGCAGCAA +
Preference number: 6 (lower is better)
Translates to: ALHSGTYCFPAH*VLSCSDPAVQQ
Trigger: TTGCTGCACCGCTGGATCTGAGCAAGATAAAACTCAATGGGCTGGAAAACAGTAAGTGCCTGAATGGAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684107.1
CDS TCA 72 bp CTGGCGATTCGTGGAGCACGGATGGTGACGCAAAGGTaGTCTTATTACAGAAAAAGCAGGGATCATCGTGAT +
Preference number: 6 (lower is better)
Translates to: LAIRGARMVTQR*SYYRKSRDHRD
Trigger: ATCACGATGATCCCTGCTTTTTCTGTAATAAGATCACCTTTGCGTCACCATCCGTGCTCCACGAATCGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000684439.1
CDS TCA 72 bp CGAAGGACACAAACAAAATTGGTGCTCATTAAGGGGTaGACGAAGACCCTGGACAACTGGCATCTTGACGTC +
Preference number: 6 (lower is better)
Translates to: RRTQTKLVLIKG*TKTLDNWHLDV
Trigger: GACGTCAAGATGCCAGTTGTCCAGGGTCTTCGTTCACCCCTTAATGAGCACCAATTTTGTTTGTGTCCTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683925.1
CDS GCA 72 bp ATGTGCCGTCCATCCGGTTCTTCATCTGGATGTCAATaGGTTGGCCTTCCCCATCCTGAGCAAATATCTTTA +
Preference number: 6 (lower is better)
Translates to: MCRPSGSSSGCQ*VGLPHPEQISL
Trigger: TAAAGATATTTGCTCAGGATGGGGAAGGCCAACGCATTGACATCCAGATGAAGAACCGGATGGACGGCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS GCA 72 bp TCCTCCATATGTGATATTAACATCGTAATCCCCCGGTaGGAAAGGAATGTACTCAGCACTGCAGCTGCCATC +
Preference number: 6 (lower is better)
Translates to: SSICDINIVIPR*ERNVLSTAAAI
Trigger: GATGGCAGCTGCAGTGCTGAGTACATTCCTTTCGCACCGGGGGATTACGATGTTAATATCACATATGGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS GCA 72 bp AACAGCCCTATCCTCTGCCTGCACAGGTTGGAGCTATaGAGGGACATATCAGTCAGAAGGAAGATCTTTCAA +
Preference number: 6 (lower is better)
Translates to: NSPILCLHRLEL*RDISVRRKIFQ
Trigger: TTGAAAGATCTTCCTTCTGACTGATATGTCCCTGCATAGCTCCAACCTGTGCAGGCAGAGGATAGGGCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS CCA 72 bp AGAGAAAGCAGGGGTTATGGGACAAGAGCTACTACTTaGCTGTTACCTCCTCTACAGCTCCAAACAAGCCTA +
Preference number: 6 (lower is better)
Translates to: RESRGYGTRATT*LLPPLQLQTSL
Trigger: TAGGCTTGTTTGGAGCTGTAGAGGAGGTAACAGCCAAGTAGTAGCTCTTGTCCCATAACCCCTGCTTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CCA 72 bp AGACTGTTCGGAAGAAAGTCCCTGAGCTTTGGAGTTTaGAATGGAGTCTTCATGCACCTCTCCATTGCTGCA +
Preference number: 6 (lower is better)
Translates to: RLFGRKSLSFGV*NGVFMHLSIAA
Trigger: TGCAGCAATGGAGAGGTGCATGAAGACTCCATTCCAAACTCCAAAGCTCAGGGACTTTCTTCCGAACAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS CCA 72 bp ATCAGTCAGAAGGAAGATCTTTCAATGGCTGAGCTATaGCCTTTGGTCCAGGACTTCTCAAAGGCAATGGGC +
Preference number: 6 (lower is better)
Translates to: ISQKEDLSMAEL*PLVQDFSKAMG
Trigger: GCCCATTGCCTTTGAGAAGTCCTGGACCAAAGGCCATAGCTCAGCCATTGAAAGATCTTCCTTCTGACTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS CCA 72 bp GGTCAGTGGCAAATGGAGATTAGTTGGGAACCATACTaGAAGGATACACTCAGTAGACTACCACCACAGAGC +
Preference number: 6 (lower is better)
Translates to: GQWQMEISWEPY*KDTLSRLPPQS
Trigger: GCTCTGTGGTGGTAGTCTACTGAGTGTATCCTTCCAGTATGGTTCCCAACTAATCTCCATTTGCCACTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684439.1
CDS CCA 72 bp TGGGCTCTCTGGGTTTACGAAGGACACAAACAAAATTaGTGCTCATTAAGGGGTGAACGAAGACCCTGGACA +
Preference number: 6 (lower is better)
Translates to: WALWVYEGHKQN*CSLRGERRPWT
Trigger: TGTCCAGGGTCTTCGTTCACCCCTTAATGAGCACCAATTTTGTTTGTGTCCTTCGTAAACCCAGAGAGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683925.1
CDS CCA 72 bp GTTGGGGTAGTTCACGTAGAACTGGAGTGGGCTCTCTaGGTTTACGAAGGACACAAACAAAATTGGTGCTCA +
Preference number: 6 (lower is better)
Translates to: VGVVHVELEWAL*VYEGHKQNWCS
Trigger: TGAGCACCAATTTTGTTTGTGTCCTTCGTAAACCCAGAGAGCCCACTCCAGTTCTACGTGAACTACCCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683925.1
CDS CAA 72 bp AAGAGAAAGCAGGGGTTATGGGACAAGAGCTACTACTaGGCTGTTACCTCCTCTACAGCTCCAAACAAGCCT +
Preference number: 6 (lower is better)
Translates to: KRKQGLWDKSYY*AVTSSTAPNKP
Trigger: AGGCTTGTTTGGAGCTGTAGAGGAGGTAACAGCCAAGTAGTAGCTCTTGTCCCATAACCCCTGCTTTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CAA 72 bp TGCTCTCCATTCAGGCACTTACTGTTTTCCAGCCCATaGAGTTTTATCTTGCTCAGATCCAGCGGTGCAGCA +
Preference number: 6 (lower is better)
Translates to: CSPFRHLLFSSP*SFILLRSSGAA
Trigger: TGCTGCACCGCTGGATCTGAGCAAGATAAAACTCAATGGGCTGGAAAACAGTAAGTGCCTGAATGGAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684107.1
CDS CAA 72 bp CTTCTGTTGGAGATGTGGCAACATGTGGCAAAAGCCTaGAACCAACACCCACTCTTAGCACCACCAAATCCA +
Preference number: 6 (lower is better)
Translates to: LLLEMWQHVAKA*NQHPLLAPPNP
Trigger: TGGATTTGGTGGTGCTAAGAGTGGGTGTTGGTTCAAGGCTTTTGCCACATGTTGCCACATCTCCAACAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683511.1
CDS CAA 72 bp ACTCACTCTAGCGAAGGACACTTTCTTACTGCCCTTTaGGAAGGCAGTTGGTGTCCTCTCTTCAACTGTCAG +
Preference number: 6 (lower is better)
Translates to: THSSEGHFLTAL*EGSWCPLFNCQ
Trigger: CTGACAGTTGAAGAGAGGACACCAACTGCCTTCCAAAAGGGCAGTAAGAAAGTGTCCTTCGCTAGAGTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684439.1
CDS CAA 90 bp GATGCCACGACTTTAGAGGGGTCAAAGGGCATTTCAATGTCAGCTTaGAAGGGAGACCCAGGTATGTGGACTTCTTCAAAGAGGATGTTG +
Preference number: 6 (lower is better)
Translates to: DATTLEGSKGISMSA*KGDPGMWTSSKRML
Trigger: CAACATCCTCTTTGAAGAAGTCCACATACCTGGGTCTCCCTTCAAAGCTGACATTGAAATGCCCTTTGACCCCTCTAAAGTCGTGGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CAA 90 bp GAGATGCTTCATTTCCACAAAAGCTCTGCTCAGATGACCATGGTCTaGGCCAATCAACCCAACATTCTTTGCTTGGAGAGACGCTGGGAA +
Preference number: 6 (lower is better)
Translates to: EMLHFHKSSAQMTMV*ANQPNILCLERRWE
Trigger: TTCCCAGCGTCTCTCCAAGCAAAGAATGTTGGGTTGATTGGCCAAGACCATGGTCATCTGAGCAGAGCTTTTGTGGAAATGAAGCATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683114.1
CDS CAA 90 bp ACAGAGGAAGGCCTATTTACCCATGTTAACTGCTTTGTGTGTATCTaGGGATCTGCAGAAAGGCAAAGGCAGCTCTGTGAGCGACATTTG +
Preference number: 6 (lower is better)
Translates to: TEEGLFTHVNCFVCI*GSAERQRQLCERHL
Trigger: CAAATGTCGCTCACAGAGCTGCCTTTGCCTTTCTGCAGATCCCAAGATACACACAAAGCAGTTAACATGGGTAAATAGGCCTTCCTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS TCA 72 bp GCCATCCTTGTTGTCTCTGCAATTTATCTTCGACTCTaGTGGTCCCTCAACAGTTATGCCAAGCCCACCAAT +
Preference number: 6 (lower is better)
Translates to: AILVVSAIYLRL*WSLNSYAKPTN
Trigger: ATTGGTGGGCTTGGCATAACTGTTGAGGGACCATCAGAGTCGAAGATAAATTGCAGAGACAACAAGGATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS TCA 72 bp CAATCATATAGCGCCCAGTCTTGTCGGGGATGTAGGTaGCAGCATACGTGCCATCTTTATTGTCATGGACAA +
Preference number: 6 (lower is better)
Translates to: QSYSAQSCRGCR*QHTCHLYCHGQ
Trigger: TTGTCCATGACAATAAAGATGGCACGTATGCTGTCACCTACATCCCCGACAAGACTGGGCGCTATATGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000481470.5
ENST00000490882.5
ENST00000493452.5
ENST00000682297.1
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS TCA 72 bp ACTTGGAACACATTTCAGACAGACTGTGTGACCTGTTaGCTGGCTAATCGGGGCCCAAGAAGAACAATTCAC +
Preference number: 6 (lower is better)
Translates to: TWNTFQTDCVTC*LANRGPRRTIH
Trigger: GTGAATTGTTCTTCTTGGGCCCCGATTAGCCAGTCAACAGGTCACACAGTCTGTCTGAAATGTGTTCCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477629.1
CDS TCA 72 bp GTCCATCTGGAAGGGATTTGGTCAAATAAATTCTGGTaGGTCTGTCCAGTGGAACATGGCAGTCAGGTCCAA +
Preference number: 6 (lower is better)
Translates to: VHLEGIWSNKFW*VCPVEHGSQVQ
Trigger: TTGGACCTGACTGCCATGTTCCACTGGACAGACTCACCAGAATTTATTTGACCAAATCCCTTCCAGATGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684439.1
CDS GCA 72 bp TTGTCAACACTCACTTCAAATGGGCTCTTGGAGATGTaGTGTCCTGCAAAGAGGACTGTGACTTTGTGTAGC +
Preference number: 6 (lower is better)
Translates to: LSTLTSNGLLEM*CPAKRTVTLCS
Trigger: GCTACACAAAGTCACAGTCCTCTTTGCAGGACAGCACATCTCCAAGAGCCCATTTGAAGTGAGTGTTGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682097.1
ENST00000682868.1
ENST00000682871.1
ENST00000682987.1
ENST00000683511.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS GCA 72 bp CACAGACTGAGACTTCTCCTCCGGGTGCTATGTTCTTaGATGAAGATGGGGATTATCCATTCCTTGAAGAAG +
Preference number: 6 (lower is better)
Translates to: HRLRLLLRVLCS*MKMGIIHSLKK
Trigger: CTTCTTCAAGGAATGGATAATCCCCATCTTCATGCAAGAACATAGCACCCGGAGGAGAAGTCTCAGTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493452.5
CDS CCA 72 bp GTTCGGAAGAAAGTCCCTGAGCTTTGGAGTTTGGAATaGAGTCTTCATGCACCTCTCCATTGCTGCACAAAA +
Preference number: 6 (lower is better)
Translates to: VRKKVPELWSLE*SLHAPLHCCTK
Trigger: TTTTGTGCAGCAATGGAGAGGTGCATGAAGACTCCATTCCAAACTCCAAAGCTCAGGGACTTTCTTCCGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS CCA 72 bp TTTGCGCCATTCAACCTTATAGCAAAGGATGCTGGCTaGTTAACTTTTAATCCCGATTCCAGGCTCTTGGGC +
Preference number: 6 (lower is better)
Translates to: FAPFNLIAKDAG*LTFNPDSRLLG
Trigger: GCCCAAGAGCCTGGAATCGGGATTAAAAGTTAACCAGCCAGCATCCTTTGCTATAAGGTTGAATGGCGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684607.1
CDS CCA 72 bp CATCTGTGGCCTGGTCAGTGGCAAATGGAGATTAGTTaGGAACCATACTGGAAGGATACACTCAGTAGACTA +
Preference number: 6 (lower is better)
Translates to: HLWPGQWQMEIS*EPYWKDTLSRL
Trigger: TAGTCTACTGAGTGTATCCTTCCAGTATGGTTCCCAACTAATCTCCATTTGCCACTGACCAGGCCACAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684439.1
CDS CAA 72 bp AAAGGAATGTACTCAGCACTGCAGCTGCCATCCTTGTaGTCTCTGCAATTTATCTTCGACTCTGATGGTCCC +
Preference number: 6 (lower is better)
Translates to: KGMYSALQLPSL*SLQFIFDSDGP
Trigger: GGGACCATCAGAGTCGAAGATAAATTGCAGAGACAACAAGGATGGCAGCTGCAGTGCTGAGTACATTCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CAA 72 bp GCGAAAGGAATGTACTCAGCACTGCAGCTGCCATCCTaGTTGTCTCTGCAATTTATCTTCGACTCTGATGGT +
Preference number: 6 (lower is better)
Translates to: AKGMYSALQLPS*LSLQFIFDSDG
Trigger: ACCATCAGAGTCGAAGATAAATTGCAGAGACAACAAGGATGGCAGCTGCAGTGCTGAGTACATTCCTTTCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CAA 72 bp GAGCAAAAATTAACCAATGGGCTGGCTAGTCAAGACTaGTGGCCACCTTTGAGCAAAGAACACTGTGGTACC +
Preference number: 6 (lower is better)
Translates to: EQKLTNGLASQD*WPPLSKEHCGT
Trigger: GGTACCACAGTGTTCTTTGCTCAAAGGTGGCCACAAGTCTTGACTAGCCAGCCCATTGGTTAATTTTTGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000481470.5
ENST00000682868.1
CDS CAA 72 bp ATTCCGACTGGATACCCATTAAAAACAGAGGGAGGTTaGCTTTGTTCAGAAGGTCAGGATACTGGGCGCTCT +
Preference number: 6 (lower is better)
Translates to: IPTGYPLKTEGG*LCSEGQDTGRS
Trigger: AGAGCGCCCAGTATCCTGACCTTCTGAACAAAGCAAACCTCCCTCTGTTTTTAATGGGTATCCAGTCGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484981.1
CDS CAA 72 bp AGACCTCTAGTCATGCCCAGTTTCAACGTTCCCACTTaGAGGGGACTCAGAATCTTTACCACGGACAACATT +
Preference number: 6 (lower is better)
Translates to: RPLVMPSFNVPT*RGLRIFTTDNI
Trigger: AATGTTGTCCGTGGTAAAGATTCTGAGTCCCCTCAAAGTGGGAACGTTGAAACTGGGCATGACTAGAGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682097.1
CDS CAA 72 bp GTCAAAATCATAGATGCCTGCACTGGGGCCCTAGCATaGCCTCCTCTGGTAACTAAATCTCACAGATACATC +
Preference number: 6 (lower is better)
Translates to: VKIIDACTGALA*PPLVTKSHRYI
Trigger: GATGTATCTGTGAGATTTAGTTACCAGAGGAGGCAATGCTAGGGCCCCAGTGCAGGCATCTATGATTTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683925.1
CDS CAA 90 bp AATTGTGAAGAGCAAAAATTAACCAATGGGCTGGCTAGTCAAGACTaGTGGCCACCTTTGAGCAAAGAACACTGTGGTACCAGCATGCTG +
Preference number: 6 (lower is better)
Translates to: NCEEQKLTNGLASQD*WPPLSKEHCGTSML
Trigger: CAGCATGCTGGTACCACAGTGTTCTTTGCTCAAAGGTGGCCACAAGTCTTGACTAGCCAGCCCATTGGTTAATTTTTGCTCTTCACAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000481470.5
ENST00000682868.1
CDS TCA 72 bp GAGCCACCGCACCCATTTGGCCCTAATGCAATATTTTaGCCAACCAAAAATCAGTTCATCTTGACTGTGAGG +
Preference number: 6 (lower is better)
Translates to: EPPHPFGPNAIF*PTKNQFILTVR
Trigger: CCTCACAGTCAAGATGAACTGATTTTTGGTTGGTCAAAATATTGCATTAGGGCCAAATGGGTGCGGTGGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS TCA 72 bp AACCCCCTCTCCAGAGCTCGCAACACAAGCTCCATCTaGAGACGATTTAGATTTCCCTTCTCTGTAGAATTT +
Preference number: 6 (lower is better)
Translates to: NPLSRARNTSSI*RRFRFPFSVEF
Trigger: AAATTCTACAGAGAAGGGAAATCTAAATCGTCTTCAGATGGAGCTTGTGTTGCGAGCTCTGGAGAGGGGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477629.1
CDS TCA 72 bp GGCTTTACCACATTCCCATGTGACCCGACGTTGATGTaGCTACACAAGAAGAACCTGTTAACTAAAGCCAAG +
Preference number: 6 (lower is better)
Translates to: GFTTFPCDPTLM*LHKKNLLTKAK
Trigger: CTTGGCTTTAGTTAACAGGTTCTTCTTGTGTAGTCACATCAACGTCGGGTCACATGGGAATGTGGTAAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477629.1
CDS TCA 72 bp ACCCACATAAGGTTTCTGCCCTCAAGGTCTCCTGAATaGATCAATGCTGGTATCAGAGGCAACTGCAAATGT +
Preference number: 6 (lower is better)
Translates to: THIRFLPSRSPE*INAGIRGNCKC
Trigger: ACATTTGCAGTTGCCTCTGATACCAGCATTGATTCATTCAGGAGACCTTGAGGGCAGAAACCTTATGTGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682987.1
ENST00000683511.1
CDS TCA 72 bp CAATACCCACATAAGGTTTCTGCCCTCAAGGTCTCCTaGATGAATCAATGCTGGTATCAGAGGCAACTGCAA +
Preference number: 6 (lower is better)
Translates to: QYPHKVSALKVS*MNQCWYQRQLQ
Trigger: TTGCAGTTGCCTCTGATACCAGCATTGATTCATTCAGGAGACCTTGAGGGCAGAAACCTTATGTGGGTATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682987.1
ENST00000683511.1
CDS TCA 72 bp GTTAAGCTGTTTGTCCATGACTCCATGTGCTGTGTGTaGGTAGTGTATTTGAAGAAACCACCCTGTGGGTCT +
Preference number: 6 (lower is better)
Translates to: VKLFVHDSMCCV*VVYLKKPPCGS
Trigger: AGACCCACAGGGTGGTTTCTTCAAATACACTACTCACACACAGCACATGGAGTCATGGACAAACAGCTTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS GCA 72 bp CCTGTTAGAGATAGAAAACCACCTAACATCCTAACATaGTTTCTCAACTTCTGCACGGCTCCACTCTGTGGA +
Preference number: 6 (lower is better)
Translates to: PVRDRKPPNILT*FLNFCTAPLCG
Trigger: TCCACAGAGTGGAGCCGTGCAGAAGTTGAGAAAGCATGTTAGGATGTTAGGTGGTTTTCTATCTCTAACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481470.5
CDS GCA 72 bp AAACGGCAGCTGTTACAGTTTCCACCAATAACAGCATaGTCGGGAGAAGGAATTTTCCTTACCATGACAGTG +
Preference number: 6 (lower is better)
Translates to: KRQLLQFPPITA*SGEGIFLTMTV
Trigger: CACTGTCATGGTAAGGAAAATTCCTTCTCCCGAGCATGCTGTTATTGGTGGAAACTGTAACAGCTGCCGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS CCA 72 bp ATGACGTGTGGAAGGGATTTACTACAGTGTTTATGGTaGTTACCTTGGGTGGTGGCTGTGAAGTGGTTTTCA +
Preference number: 6 (lower is better)
Translates to: MTCGRDLLQCLW*LPWVVAVKWFS
Trigger: TGAAAACCACTTCACAGCCACCACCCAAGGTAACCACCATAAACACTGTAGTAAATCCCTTCCACACGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481470.5
CDS CCA 72 bp ATCATGACGTGTGGAAGGGATTTACTACAGTGTTTATaGTGGTTACCTTGGGTGGTGGCTGTGAAGTGGTTT +
Preference number: 6 (lower is better)
Translates to: IMTCGRDLLQCL*WLPWVVAVKWF
Trigger: AAACCACTTCACAGCCACCACCCAAGGTAACCACCATAAACACTGTAGTAAATCCCTTCCACACGTCATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481470.5
CDS CCA 72 bp GCTTATCAGCCTGCTAAGGGTTTGAGAGGACACTCTTaGAAACATTGCTCCAACTTAAGAGACACGGAACTA +
Preference number: 6 (lower is better)
Translates to: AYQPAKGLRGHS*KHCSNLRDTEL
Trigger: TAGTTCCGTGTCTCTTAAGTTGGAGCAATGTTTCCAAGAGTGTCCTCTCAAACCCTTAGCAGGCTGATAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682097.1
CDS CCA 72 bp ATTGATGTGTGTAAGGACCTTGACTGGTGCTGTCTGTaGTCGTGCAAAACTAAAGCAACCCAATGTCCATCT +
Preference number: 6 (lower is better)
Translates to: IDVCKDLDWCCL*SCKTKATQCPS
Trigger: AGATGGACATTGGGTTGCTTTAGTTTTGCACGACCACAGACAGCACCAGTCAAGGTCCTTACACACATCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684439.1
CDS CAA 72 bp ACTTTAGAGGGGTCAAAGGGCATTTCAATGTCAGCTTaGAAGGGAGACCCAGGTATGTGGACTTCTTCAAAG +
Preference number: 6 (lower is better)
Translates to: TLEGSKGISMSA*KGDPGMWTSSK
Trigger: CTTTGAAGAAGTCCACATACCTGGGTCTCCCTTCAAAGCTGACATTGAAATGCCCTTTGACCCCTCTAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684506.1
ENST00000684607.1
CDS CAA 72 bp ATACAGCAAACTCACCCATTAAAAACAGAGGGAGGTTaGCTTTGTTCAGAAGGTCAGGATACTGGGCGCTCT +
Preference number: 6 (lower is better)
Translates to: IQQTHPLKTEGG*LCSEGQDTGRS
Trigger: AGAGCGCCCAGTATCCTGACCTTCTGAACAAAGCAAACCTCCCTCTGTTTTTAATGGGTGAGTTTGCTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS TCA 72 bp AACTCTACAGTAATGAGGCTTTACCACATTCCCATGTaGCCCGACGTTGATGTGACTACACAAGAAGAACCT +
Preference number: 6 (lower is better)
Translates to: NSTVMRLYHIPM*PDVDVTTQEEP
Trigger: AGGTTCTTCTTGTGTAGTCACATCAACGTCGGGTCACATGGGAATGTGGTAAAGCCTCATTACTGTAGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477629.1
CDS TCA 72 bp TTTGTGTGTATTCAGGGGCTAGAAGACACTTATTACTaGGTTTGGAAGCCTCCACTTCTGCAAAAAGGGTCC +
Preference number: 6 (lower is better)
Translates to: FVCIQGLEDTYY*VWKPPLLQKGS
Trigger: GGACCCTTTTTGCAGAAGTGGAGGCTTCCAAACTCAGTAATAAGTGTCTTCTAGCCCCTGAATACACACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS GCA 72 bp GTAGTCATAATTATCGATGATATCCAAATCCTTCACTaGATCGCCAGGAAGAGGGCTGTTGAACTGCACGTT +
Preference number: 6 (lower is better)
Translates to: VVIIIDDIQILH*IARKRAVELHV
Trigger: AACGTGCAGTTCAACAGCCCTCTTCCTGGCGATGCAGTGAAGGATTTGGATATCATCGATAATTATGACTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684107.1
ENST00000684506.1
ENST00000684607.1
CDS GCA 72 bp TACTTGAGACATAAAAGAGCCTCCAGATCTCTGGCATaGTGTTTACAGATAAACAGACGTCGATGGAAGGGA +
Preference number: 6 (lower is better)
Translates to: YLRHKRASRSLA*CLQINRRRWKG
Trigger: TCCCTTCCATCGACGTCTGTTTATCTGTAAACAGCATGCCAGAGATCTGGAGGCTCTTTTATGTCTCAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS CCA 72 bp TTCTGGGCAGAGGAGCCTCAAAATTTTCACTCACAGTaGCTTCCCTCTGGAAGGATTCTTTATAGAAAGAAC +
Preference number: 6 (lower is better)
Translates to: FWAEEPQNFHSQ*LPSGRILYRKN
Trigger: GTTCTTTCTATAAAGAATCCTTCCAGAGGGAAGCCACTGTGAGTGAAAATTTTGAGGCTCCTCTGCCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477629.1
CDS CCA 72 bp TATAACCTTTCAAGCTGGTTAGGCACGCTTAGGATGTaGCAATTTTACTCTACAGCTGAGACACTGCCAAAG +
Preference number: 6 (lower is better)
Translates to: YNLSSWLGTLRM*QFYSTAETLPK
Trigger: CTTTGGCAGTGTCTCAGCTGTAGAGTAAAATTGCCACATCCTAAGCGTGCCTAACCAGCTTGAAAGGTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481470.5
ENST00000682868.1
CDS CAA 72 bp TACGTGCCATCTTTATTGTCATGGACAATGGCTCTTTaGGGTTTTCCTTCTTGGTCCTGCGAGGAATCTCTT +
Preference number: 6 (lower is better)
Translates to: YVPSLLSWTMAL*GFPSWSCEESL
Trigger: AAGAGATTCCTCGCAGGACCAAGAAGGAAAACCCAAAAGAGCCATTGTCCATGACAATAAAGATGGCACGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682297.1
CDS CCA 72 bp GTTACCTCCTCTACAGCTCCAAACAAGCCTATTAGGTaGGTCCTGTTATTAATCCTGTTTTACAGGAAAGGA +
Preference number: 6 (lower is better)
Translates to: VTSSTAPNKPIR*VLLLILFYRKG
Trigger: TCCTTTCCTGTAAAACAGGATTAATAACAGGACCCACCTAATAGGCTTGTTTGGAGCTGTAGAGGAGGTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS GCA 72 bp TTCTGGATATCAATAAAAACAAAAGAGCTGCTATCGTaGAACTCTCAAACACAACCCAGCTGTTCCTGGAAG +
Preference number: 6 (lower is better)
Translates to: FWISIKTKELLS*NSQTQPSCSWK
Trigger: CTTCCAGGAACAGCTGGGTTGTGTTTGAGAGTTGCACGATAGCAGCTCTTTTGTTTTTATTGATATCCAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419752.4
CDS CAA 90 bp ATGACTGGGAATCCGTGTCGTCAGCTAAAATCAAAAGGCTGTTACTaGAGAGTCCTTCATAATAGAGGCAGATATCCAAGTAAAGCTTCT +
Preference number: 6 (lower is better)
Translates to: MTGNPCRQLKSKGCY*RVLHNRGRYPSKAS
Trigger: AGAAGCTTTACTTGGATATCTGCCTCTATTATGAAGGACTCTCAAGTAACAGCCTTTTGATTTTAGCTGACGACACGGATTCCCAGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS GCA 72 bp AATGAAAGACCTTGGTCATTCACTAACCCAGGTGTTTaGATAATGGTTTCCTCCTTTTATTCCAGATGTTCC +
Preference number: 6 (lower is better)
Translates to: NERPWSFTNPGV*IMVSSFYSRCS
Trigger: GGAACATCTGGAATAAAAGGAGGAAACCATTATGCAAACACCTGGGTTAGTGAATGACCAAGGTCTTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS GCA 72 bp ATCCCTAGGATTTCAAAATTCTCTCTTTCAGGATCCTaGTCACCCTATCTTCACTATTGCATACCTGAAACT +
Preference number: 6 (lower is better)
Translates to: IPRISKFSLSGS*SPYLHYCIPET
Trigger: AGTTTCAGGTATGCAATAGTGAAGATAGGGTGAGCAGGATCCTGAAAGAGAGAATTTTGAAATCCTAGGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684517.1
CDS CCA 72 bp CTGGCCCATTGCTTACTTTTGCAAATAAAGTTTTACTaGAACATGGCCACACACGTTTGTTTACGTATTCCT +
Preference number: 6 (lower is better)
Translates to: LAHCLLLQIKFY*NMATHVCLRIP
Trigger: AGGAATACGTAAACAAACGTGTGTGGCCATGTTCCAGTAAAACTTTATTTGCAAAAGTAAGCAATGGGCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000682987.1
ENST00000683511.1
CDS CCA 72 bp CCATTTGCCACTTCTGTGAATCCAAGAACATATCATTaGCGAGGAAAATCCAGATTACGTAAGAAATTAGGC +
Preference number: 6 (lower is better)
Translates to: PFATSVNPRTYH*RGKSRLRKKLG
Trigger: GCCTAATTTCTTACGTAATCTGGATTTTCCTCGCCAATGATATGTTCTTGGATTCACAGAAGTGGCAAATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS CCA 72 bp TCTCTGGCATGCTGTTTACAGATAAACAGACGTCGATaGAAGGGAATAATACTACAACAGAGTATAGACTGT +
Preference number: 6 (lower is better)
Translates to: SLACCLQINRRR*KGIILQQSIDC
Trigger: ACAGTCTATACTCTGTTGTAGTATTATTCCCTTCCATCGACGTCTGTTTATCTGTAAACAGCATGCCAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS CCA 72 bp TTGCAGACTATTGGAATAAAGGCAGAAGAGGTTAAATaGATGTCAAGACCACTACCTTTAGGCACAGAACAT +
Preference number: 6 (lower is better)
Translates to: LQTIGIKAEEVK*MSRPLPLGTEH
Trigger: ATGTTCTGTGCCTAAAGGTAGTGGTCTTGACATCCATTTAACCTCTTCTGCCTTTATTCCAATAGTCTGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684517.1
CDS CAA 72 bp AATCCGTGTCGTCAGCTAAAATCAAAAGGCTGTTACTaGAGAGTCCTTCATAATAGAGGCAGATATCCAAGT +
Preference number: 6 (lower is better)
Translates to: NPCRQLKSKGCY*RVLHNRGRYPS
Trigger: ACTTGGATATCTGCCTCTATTATGAAGGACTCTCAAGTAACAGCCTTTTGATTTTAGCTGACGACACGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682868.1
CDS CAA 72 bp CTCCAAAAATTTGATACCATATTCTACTGGCAAATTTaGTGGAAAAGAAGGTGCTCTTCTCCATGGCCAGAG +
Preference number: 6 (lower is better)
Translates to: LQKFDTIFYWQI*WKRRCSSPWPE
Trigger: CTCTGGCCATGGAGAAGAGCACCTTCTTTTCCACAAAATTTGCCAGTAGAATATGGTATCAAATTTTTGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683925.1
CDS TCA 72 bp GGCACATATTTGACTGTGAACGTATCATTGGCATTGTaGATAATGTCAAAATCCACGTCTTCCTCATCTTCA +
Preference number: 6 (lower is better)
Translates to: GTYLTVNVSLAL*IMSKSTSSSSS
Trigger: TGAAGATGAGGAAGACGTGGATTTTGACATTATTCACAATGCCAATGATACGTTCACAGTCAAATATGTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000295956.9
ENST00000358537.7
ENST00000429972.6
ENST00000490882.5
ENST00000493452.5
ENST00000682868.1
ENST00000682871.1
ENST00000684107.1
ENST00000684506.1
ENST00000684517.1
ENST00000684607.1
CDS GCA 72 bp TTAGGATGTGGCAATTTTACTCTACAGCTGAGACACTaGCAAAGAGTCCAGAATTGTGAAGAGCAAAAATTA +
Preference number: 6 (lower is better)
Translates to: LGCGNFTLQLRH*QRVQNCEEQKL
Trigger: TAATTTTTGCTCTTCACAATTCTGGACTCTTTGGCAGTGTCTCAGCTGTAGAGTAAAATTGCCACATCCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481470.5
ENST00000682868.1
CDS CCA 72 bp ACCTACATTCTTTATGTAACAGTGAATCATGACGTGTaGAAGGGATTTACTACAGTGTTTATGGTGGTTACC +
Preference number: 6 (lower is better)
Translates to: TYILYVTVNHDV*KGFTTVFMVVT
Trigger: GGTAACCACCATAAACACTGTAGTAAATCCCTTCCACACGTCATGATTCACTGTTACATAAAGAATGTAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481470.5
CDS CAA 72 bp AAAACAAGAGCCATCATCCTTTACCGTCAAGAAGCTTaGGCATTTCTTTTAGGCAACAAGACAAAGTTAGAG +
Preference number: 6 (lower is better)
Translates to: KTRAIILYRQEA*AFLLGNKTKLE
Trigger: CTCTAACTTTGTCTTGTTGCCTAAAAGAAATGCCAAAGCTTCTTGACGGTAAAGGATGATGGCTCTTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682503.1
CDS CAA 72 bp TCTTTCCAACCATCAGACTGGCAAAGCTCCAAAAATTaGATACCATATTCTACTGGCAAATTTTGTGGAAAA +
Preference number: 6 (lower is better)
Translates to: SFQPSDWQSSKN*IPYSTGKFCGK
Trigger: TTTTCCACAAAATTTGCCAGTAGAATATGGTATCAAATTTTTGGAGCTTTGCCAGTCTGATGGTTGGAAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683925.1
CDS TCA 72 bp TTCAAACACTGCCCTCTGACATCTCATACTATTTACTaGCATTCAAAGTTCAAAGTAGCTTTAACACATCTA +
Preference number: 6 (lower is better)
Translates to: FKHCPLTSHTIY*HSKFKVALTHL
Trigger: TAGATGTGTTAAAGCTACTTTGAACTTTGAATGTCAGTAAATAGTATGAGATGTCAGAGGGCAGTGTTTGAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481470.5