RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FLI1 (Homo sapiens)

Ensembl gene IDs: ENSG00000151702

Ensembl transcript IDs: ENST00000281428.12, ENST00000344954.10, ENST00000429175.7, ENST00000527767.7, ENST00000527786.7, ENST00000528790.1, ENST00000534087.3, ENST00000608055.1, ENST00000608303.5

Found 899 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCCAGCCAGCGCAAGCCCTGCGTGCGGCCATGGGGCTCCACGGCTaGCGCTCAGGGTGGGTACAGGTGAAGCCCAGCATAAAAGGCTGC +
Preference number: 1 (lower is better)
Translates to: LQPAQALRAAMGLHG*RSGWVQVKPSIKGC
Trigger: GCAGCCTTTTATGCTGGGCTTCACCTGTACCCACCCTGAGCGGCAGCCGTGGAGCCCCATGGCCGCACGCAGGGCTTGCGCTGGCTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429175.7
3UTR CCA 90 bp CCTGAAGGAAGCAGGGCGCTTATTCTTTGCTGGAGTGGCAGAAGGTaGCCGTCTGGGTCTGAAGTGCCCAGGGGAGGCTGCAGAGTTAAA +
Preference number: 1 (lower is better)
Translates to: PEGSRALILCWSGRR*PSGSEVPRGGCRVK
Trigger: TTTAACTCTGCAGCCTCCCCTGGGCACTTCAGACCCAGACGGCCACCTTCTGCCACTCCAGCAAAGAATAAGCGCCCTGCTTCCTTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
3UTR GCA 90 bp TGTACATGGACGACTCGGTCGGATGTGGCTGCAGAGCCTGGGCAATaGCGTGGAAGTCAAATTTGTAAGCATATCTTTTGCCGTGCACTT +
Preference number: 1 (lower is better)
Translates to: CTWTTRSDVAAEPGQ*RGSQICKHIFCRAL
Trigger: AAGTGCACGGCAAAAGATATGCTTACAAATTTGACTTCCACGGCATTGCCCAGGCTCTGCAGCCACATCCGACCGAGTCGTCCATGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR CCA 90 bp GAAGTGCCCAGGGGAGGCTGCAGAGTTAAATCTCACAGACCAGTCTaGATAGACCAGCTCGCTTTGCTCCAGTCCTTACATACAGGTTTA +
Preference number: 1 (lower is better)
Translates to: EVPRGGCRVKSHRPV*IDQLALLQSLHTGL
Trigger: TAAACCTGTATGTAAGGACTGGAGCAAAGCGAGCTGGTCTATCCAGACTGGTCTGTGAGATTTAACTCTGCAGCCTCCCCTGGGCACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
3UTR GCA 90 bp TGGCCCTGGTCTGATGGTCTGACAAGCGCACAGCACTTGCGAATCTaGTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGACC +
Preference number: 1 (lower is better)
Translates to: WPWSDGLTSAQHLRI*LSLEIPTTFPSSGT
Trigger: GGTCCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAGACCATCAGACCAGGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR CCA 90 bp CTCTGCATAATTTATACAGTAAGTTGCCTTCTGATTGGTTGGCCCTaGTCTGATGGTCTGACAAGCGCACAGCACTTGCGAATCTGCTTG +
Preference number: 1 (lower is better)
Translates to: LCIIYTVSCLLIGWP*SDGLTSAQHLRICL
Trigger: CAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAGACCATCAGACCAGGGCCAACCAATCAGAAGGCAACTTACTGTATAAATTATGCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR GCA 90 bp AGTGGTCAGCTGAGTGCATACTGTCCACTGAGAGGGATTCTGCAATaGCCTTGGCGTCTTAAACACACAAACCTTCTTTCCATCAAATTC +
Preference number: 1 (lower is better)
Translates to: SGQLSAYCPLRGILQ*PWRLKHTNLLSIKF
Trigger: GAATTTGATGGAAAGAAGGTTTGTGTGTTTAAGACGCCAAGGGCATTGCAGAATCCCTCTCAGTGGACAGTATGCACTCAGCTGACCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR CCA 90 bp CACATATGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATaGGCTTCAGCTAGAAGGCCACTGATGAGTAAGCTTCTAGTAGTA +
Preference number: 1 (lower is better)
Translates to: HICPVESKASSKCAG*ASARRPLMSKLLVV
Trigger: TACTACTAGAAGCTTACTCATCAGTGGCCTTCTAGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACATATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR TCA 90 bp CATAATTTATACAGTAAGTTGCCTTCTGATTGGTTGGCCCTGGTCTaGTGGTCTGACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTT +
Preference number: 1 (lower is better)
Translates to: HNLYSKLPSDWLALV*WSDKRTALANLLEF
Trigger: AAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAGACCATCAGACCAGGGCCAACCAATCAGAAGGCAACTTACTGTATAAATTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR TCA 90 bp AGAAAAATGACCTTAAAAATCTGCATGAGCCATAAAGTCCTGGTCTaGGACCTGAAGGAAGCAGGGCGCTTATTCTTTGCTGGAGTGGCA +
Preference number: 1 (lower is better)
Translates to: RKMTLKICMSHKVLV*DLKEAGRLFFAGVA
Trigger: TGCCACTCCAGCAAAGAATAAGCGCCCTGCTTCCTTCAGGTCTCAGACCAGGACTTTATGGCTCATGCAGATTTTTAAGGTCATTTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
3UTR TCA 90 bp ATAAGCTTCCCACCTCTATTTGTCACTAAATCTCAAACCAGAACATaGCGGGTTAAGTCCATGATTCTGTGTCATACTGAACCCCGTGTA +
Preference number: 1 (lower is better)
Translates to: ISFPPLFVTKSQTRT*RVKSMILCHTEPRV
Trigger: TACACGGGGTTCAGTATGACACAGAATCATGGACTTAACCCGTCATGTTCTGGTTTGAGATTTAGTGACAAATAGAGGTGGGAAGCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR CCA 90 bp CTTGGCGTCTTAAACACACAAACCTTCTTTCCATCAAATTCCAGTTaGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCA +
Preference number: 1 (lower is better)
Translates to: LGVLNTQTFFPSNSS*VKTSLALQSMFQLP
Trigger: TGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTGTTTAAGACGCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR GCA 90 bp CTTCTTTCTCAGAACCATGACTTAACCATTCCAGTAATCTTAATATaGAACTCACAAGATGCTAGGAGACTGAGAATTCAAACTGGCATA +
Preference number: 1 (lower is better)
Translates to: LLSQNHDLTIPVILI*NSQDARRLRIQTGI
Trigger: TATGCCAGTTTGAATTCTCAGTCTCCTAGCATCTTGTGAGTTGCATATTAAGATTACTGGAATGGTTAAGTCATGGTTCTGAGAAAGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR GCA 90 bp TGTGATGCGGCTCCAAAGAAGCTGGAGGAAGTGACAGGCATGGAGGATGGATGGAGCCAGCGCAAGCCCTaGGTGCGGCCATGGGGCTCC +
Preference number: 2 (lower is better)
Translates to: CDAAPKKLEEVTGMEDGWSQRKP*VRPWGS
Trigger: GGAGCCCCATGGCCGCACGCAGGGCTTGCGCTGGCT...CCATCCATCCTCCATGCCTGTCACTTCCTCCAGCTTCTTTGGAGCCGCATCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429175.7
3UTR-3UTR TCA 90 bp TGTGATGCGGCTCCAAAGAAGCTGGAGGAAGTGACAGGCATGGAGGATGGATGGGTCGGGCCCAGGATCTaGTACGGATCTGGCTGGGGC +
Preference number: 2 (lower is better)
Translates to: CDAAPKKLEEVTGMEDGWVGPRI*YGSGWG
Trigger: GCCCCAGCCAGATCCGTATCAGATCCTGGGCCCGAC...CCATCCATCCTCCATGCCTGTCACTTCCTCCAGCTTCTTTGGAGCCGCATCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR-3UTR CCA 90 bp GGTCAGCTGAGTGCATACTGTCCACTGAGAGGGATTCTGCAATGCCCTTGGCGTCCGTGTTGTAGAGGGTaGTGGCGCGGAGGAAGTCCT +
Preference number: 2 (lower is better)
Translates to: GQLSAYCPLRGILQCPWRPCCRG*WRGGSP
Trigger: AGGACTTCCTCCGCGCCACCACCCTCTACAACACGG...ACGCCAAGGGCATTGCAGAATCCCTCTCAGTGGACAGTATGCACTCAGCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429175.7
3UTR-3UTR GCA 90 bp GACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTAGCGCAAGCCCTGCGTaGGGCCATGGGGCTCCACGG +
Preference number: 2 (lower is better)
Translates to: DKRTALANLLEFRNPYNFSASPA*GHGAPR
Trigger: CCGTGGAGCCCCATGGCCGCACGCAGGGCTTGCGCT...AAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429175.7
3UTR-3UTR GCA 90 bp AAGTGTGCAGGATGGGCTTCAGCTAGAAGGCCACTGATGAGTAAGCTTCTAGTAGGTTGGCTAGGCGACTaGTGGTCGGGCCCAGGATCT +
Preference number: 2 (lower is better)
Translates to: KCAGWASARRPLMSKLLVGWLGD*WSGPGS
Trigger: AGATCCTGGGCCCGACCAGCAGTCGCCTAGCCAACC...TACTAGAAGCTTACTCATCAGTGGCCTTCTAGCTGAAGCCCATCCTGCACACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR-3UTR GCA 90 bp TGTGATGCGGCTCCAAAGAAGCTGGAGGAAGTGACAGGCATGGAGGATGGATGGGCAGAGCCTGGGCAATaGCGTGGAAGTCAAATTTGT +
Preference number: 2 (lower is better)
Translates to: CDAAPKKLEEVTGMEDGWAEPGQ*RGSQIC
Trigger: ACAAATTTGACTTCCACGGCATTGCCCAGGCTCTGC...CCATCCATCCTCCATGCCTGTCACTTCCTCCAGCTTCTTTGGAGCCGCATCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR-3UTR GCA 90 bp CTGACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTCGGTCGGATGTGGCTaGAGAGCCTGGGCAATGCCG +
Preference number: 2 (lower is better)
Translates to: LTSAQHLRICLSLEIPTTSVGCG*RAWAMP
Trigger: CGGCATTGCCCAGGCTCTGCAGCCACATCCGACCGA...AGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR-3UTR TCA 90 bp TGTGATGCGGCTCCAAAGAAGCTGGAGGAAGTGACAGGCATGGAGGATGGATGGCTGAACCCCGTGTATTaGCAAGAAACTGCTTTGGTC +
Preference number: 2 (lower is better)
Translates to: CDAAPKKLEEVTGMEDGWLNPVY*QETALV
Trigger: GACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAG...CCATCCATCCTCCATGCCTGTCACTTCCTCCAGCTTCTTTGGAGCCGCATCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR-3UTR TCA 90 bp AAGTGTGCAGGATGGGCTTCAGCTAGAAGGCCACTGATGAGTAAGCTTCTAGTACCTGGTCTGATGGTCTaGCAAGCGCACAGCACTTGC +
Preference number: 2 (lower is better)
Translates to: KCAGWASARRPLMSKLLVPGLMV*QAHSTC
Trigger: GCAAGTGCTGTGCGCTTGTCAGACCATCAGACCAGG...TACTAGAAGCTTACTCATCAGTGGCCTTCTAGCTGAAGCCCATCCTGCACACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR-3UTR GCA 90 bp TGTGATGCGGCTCCAAAGAAGCTGGAGGAAGTGACAGGCATGGAGGATGGATGGAGAGGGATTCTGCAATaGCCTTGGCGTCTTAAACAC +
Preference number: 2 (lower is better)
Translates to: CDAAPKKLEEVTGMEDGWRGILQ*PWRLKH
Trigger: GTGTTTAAGACGCCAAGGGCATTGCAGAATCCCTCT...CCATCCATCCTCCATGCCTGTCACTTCCTCCAGCTTCTTTGGAGCCGCATCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR-3UTR GCA 90 bp AAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAGCTCCCAAGCACCGTaGCTCCTCCAGCCAGCGCAA +
Preference number: 2 (lower is better)
Translates to: KRTALANLLEFRNPYNFSSSQAP*LLQPAQ
Trigger: TTGCGCTGGCTGGAGGAGGCACGGTGCTTGGGAGCT...GGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429175.7
3UTR-3UTR CCA 90 bp ATATGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTCTCTCCTCTCGTTGGTaGTCATGTTGGGAGGAGGGG +
Preference number: 2 (lower is better)
Translates to: ICPVESKASSKCAGWASALSSRW*SCWEEG
Trigger: CCCCTCCTCCCAACATGACCACCAACGAGAGGAGAG...AGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429175.7
3UTR-3UTR CCA 90 bp GGTCAGCTGAGTGCATACTGTCCACTGAGAGGGATTCTGCAATGCCCTTGGCGTCCATCAAATTCCAGTTaGGTGAAAACTTCACTGGCC +
Preference number: 2 (lower is better)
Translates to: GQLSAYCPLRGILQCPWRPSNSS*VKTSLA
Trigger: GGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGG...ACGCCAAGGGCATTGCAGAATCCCTCTCAGTGGACAGTATGCACTCAGCTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CCA 90 bp TGTTACACGCATTTCCAAAGCATTAAAGATCTAAATGGATTATCTTTTCCCTGCCCCTGCGTGCGGCCATaGGGCTCCACGGCTGCCGCT +
Preference number: 2 (lower is better)
Translates to: CYTHFQSIKDLNGLSFPCPCVRP*GSTAAA
Trigger: AGCGGCAGCCGTGGAGCCCCATGGCCGCACGCAGGG...GCAGGGAAAAGATAATCCATTTAGATCTTTAATGCTTTGGAAATGCGTGTAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429175.7
3UTR-3UTR CCA 90 bp AAGTGTGCAGGATGGGCTTCAGCTAGAAGGCCACTGATGAGTAAGCTTCTAGTAGATCTGATACGGATCTaGCTGGGGCCGTTGCTCTGT +
Preference number: 2 (lower is better)
Translates to: KCAGWASARRPLMSKLLVDLIRI*LGPLLC
Trigger: ACAGAGCAACGGCCCCAGCCAGATCCGTATCAGATC...TACTAGAAGCTTACTCATCAGTGGCCTTCTAGCTGAAGCCCATCCTGCACACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR-3UTR TCA 90 bp AAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCTGGTTGGCCCTGGTCTaGTGGTCTGACAAGCGCACA +
Preference number: 2 (lower is better)
Translates to: KRTALANLLEFRNPYNFSWLALV*WSDKRT
Trigger: TGTGCGCTTGTCAGACCATCAGACCAGGGCCAACCA...GGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR TCA 90 bp AAACTGGAGACAAATGTTCCGAAACACATCCCATTTCATTTAGGTAGACATGTTGTGGCCGTCTGGGTCTaGAGTGCCCAGGGGAGGCTG +
Preference number: 2 (lower is better)
Translates to: KLETNVPKHIPFHLGRHVVAVWV*SAQGRL
Trigger: CAGCCTCCCCTGGGCACTTCAGACCCAGACGGCCAC...AACATGTCTACCTAAATGAAATGGGATGTGTTTCGGAACATTTGTCTCCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
3UTR-3UTR GCA 90 bp ATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTCATAAACCTCGCCCGCTCGCCTaGCAGTCCTCCCTCCATTCT +
Preference number: 2 (lower is better)
Translates to: ILCHTEPRVLTRNCFGHKPRPLA*QSSLHS
Trigger: AGAATGGAGGGAGGACTGGCAGGCGAGCGGGCGAGG...TTTATGACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429175.7
3UTR-3UTR GCA 90 bp GCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCGCCCACTCCAGCCATTaGCTCACATGCTCCTGTGTC +
Preference number: 2 (lower is better)
Translates to: ARRLRIQTGILAHGIIHLAHSSH*LTCSCV
Trigger: GACACAGGAGCATGTGAGGCAATGGCTGGAGTGGGC...GAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429175.7
3UTR-3UTR CCA 90 bp GACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTGTAGTTCATGGGGTTaGACTCGCCTCCGCCCACCA +
Preference number: 2 (lower is better)
Translates to: DKRTALANLLEFRNPYNFCSSWG*TRLRPP
Trigger: TGGTGGGCGGAGGCGAGTCCAACCCCATGAACTACA...AAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429175.7
3UTR-3UTR CCA 90 bp CTTGGCGTCTTAAACACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAGATGGCGGGGGACGTTaGGGTTGGGGTAGATTCCCC +
Preference number: 2 (lower is better)
Translates to: LGVLNTQTFFPSNSSWVKDGGGR*GWGRFP
Trigger: GGGGAATCTACCCCAACCCCAACGTCCCCCGCCATC...TTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTGTTTAAGACGCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR-3UTR CCA 90 bp ACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTACGTGGGTGTTAGGATaGCGGGGGACGTTGGGGTTG +
Preference number: 2 (lower is better)
Translates to: TSAQHLRICLSLEIPTTFTWVLG*RGTLGL
Trigger: CAACCCCAACGTCCCCCGCCATCCTAACACCCACGT...AAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR CAA 90 bp CCCTGGTCTGATGGTCTGACAAGCGCACAGCACTTGCGAATCTGCTaGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGACCACT +
Preference number: 2 (lower is better)
Translates to: PWSDGLTSAQHLRIC*SLEIPTTFPSSGTT
Trigger: AGTGGTCCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAGACCATCAGACCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR TCA 90 bp AAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCCCAGGGAAAACCCTTTaGCCTAACGGGGGCGGTAAA +
Preference number: 2 (lower is better)
Translates to: KRTALANLLEFRNPYNFSPGKTL*PNGGGK
Trigger: TTTACCGCCCCCGTTAGGTCAAAGGGTTTTCCCTGG...GGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
3UTR-3UTR GCA 90 bp CTGACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTAGCCATTGCCTCACATaGTCCTGTGTCCACAGTGTG +
Preference number: 2 (lower is better)
Translates to: LTSAQHLRICLSLEIPTTSHCLT*SCVHSV
Trigger: CACACTGTGGACACAGGAGCATGTGAGGCAATGGCT...AGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429175.7
3UTR-3UTR CCA 90 bp CTTGGCGTCTTAAACACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAATGGCTAGGCGACTGCTaGTCGGGCCCAGGATCTGAT +
Preference number: 2 (lower is better)
Translates to: LGVLNTQTFFPSNSSWVKWLGDC*SGPGSD
Trigger: ATCAGATCCTGGGCCCGACCAGCAGTCGCCTAGCCA...TTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTGTTTAAGACGCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR-3UTR CCA 90 bp CTTGGCGTCTTAAACACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAACGTGGGTGTTAGGATaGCGGGGGACGTTGGGGTTG +
Preference number: 2 (lower is better)
Translates to: LGVLNTQTFFPSNSSWVKTWVLG*RGTLGL
Trigger: CAACCCCAACGTCCCCCGCCATCCTAACACCCACGT...TTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTGTTTAAGACGCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR CAA 90 bp CTGATTGGTTGGCCCTGGTCTGATGGTCTGACAAGCGCACAGCACTaGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGT +
Preference number: 2 (lower is better)
Translates to: LIGWPWSDGLTSAQH*RICLSLEIPTTFPS
Trigger: ACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAGACCATCAGACCAGGGCCAACCAATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR CAA 90 bp TGCAGAGTTAAATCTCACAGACCAGTCTGGATAGACCAGCTCGCTTaGCTCCAGTCCTTACATACAGGTTTATCCATGGCCTTAGCTGCT +
Preference number: 2 (lower is better)
Translates to: CRVKSHRPVWIDQLA*LQSLHTGLSMALAA
Trigger: AGCAGCTAAGGCCATGGATAAACCTGTATGTAAGGACTGGAGCAAAGCGAGCTGGTCTATCCAGACTGGTCTGTGAGATTTAACTCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
3UTR-3UTR TCA 90 bp ATATGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTCTGAACCCCGTGTATTaGCAAGAAACTGCTTTGGTC +
Preference number: 2 (lower is better)
Translates to: ICPVESKASSKCAGWASALNPVY*QETALV
Trigger: GACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAG...AGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR TCA 90 bp TCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCATGGTTGGCCCTGGTCTaGTGGTCTGACAAGCGCACA +
Preference number: 2 (lower is better)
Translates to: SIKFQLGENFTGLTINVPWLALV*WSDKRT
Trigger: TGTGCGCTTGTCAGACCATCAGACCAGGGCCAACCA...TGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR GCA 90 bp AAGTGTGCAGGATGGGCTTCAGCTAGAAGGCCACTGATGAGTAAGCTTCTAGTAAGAGGGATTCTGCAATaGCCTTGGCGTCTTAAACAC +
Preference number: 2 (lower is better)
Translates to: KCAGWASARRPLMSKLLVRGILQ*PWRLKH
Trigger: GTGTTTAAGACGCCAAGGGCATTGCAGAATCCCTCT...TACTAGAAGCTTACTCATCAGTGGCCTTCTAGCTGAAGCCCATCCTGCACACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR-3UTR GCA 90 bp AAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCGAGTGGTCAGCTGAGTaGATACTGTCCACTGAGAGG +
Preference number: 2 (lower is better)
Translates to: KRTALANLLEFRNPYNFSEWSAE*ILSTER
Trigger: CCTCTCAGTGGACAGTATGCACTCAGCTGACCACTC...GGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CCA 90 bp ACAGTAAGTTGCCTTCTGATTGGTTGGCCCTGGTCTGATGGTCTGACAAGCGCAATTCTGCAATGCCCTTaGCGTCTTAAACACACAAAC +
Preference number: 2 (lower is better)
Translates to: TVSCLLIGWPWSDGLTSAILQCP*RLKHTN
Trigger: GTTTGTGTGTTTAAGACGCCAAGGGCATTGCAGAAT...TGCGCTTGTCAGACCATCAGACCAGGGCCAACCAATCAGAAGGCAACTTACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CCA 90 bp AAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCAGCTGTTGTAGTTCATaGGGTTGGACTCGCCTCCGC +
Preference number: 2 (lower is better)
Translates to: KLHWPYNQCSSCHPLNLVSCCSS*GWTRLR
Trigger: GCGGAGGCGAGTCCAACCCCATGAACTACAACAGCT...GACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429175.7
3UTR-3UTR CCA 90 bp CACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGGATCTGATACGGATCTaGCTGGGGCCGTTGCTCTGT +
Preference number: 2 (lower is better)
Translates to: HLRICLSLEIPTTFPSSGDLIRI*LGPLLC
Trigger: ACAGAGCAACGGCCCCAGCCAGATCCGTATCAGATC...CCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR-3UTR CCA 90 bp CTTGGCGTCTTAAACACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAAGGAATTGCCACAGCTaGATCTGCCCGCTTCCAGGG +
Preference number: 2 (lower is better)
Translates to: LGVLNTQTFFPSNSSWVKRNCHS*ICPLPG
Trigger: CCCTGGAAGCGGGCAGATCCAGCTGTGGCAATTCCT...TTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTGTTTAAGACGCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR-3UTR CCA 90 bp ATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTCATAAACGACTCGGTCGGATGTaGCTGCAGAGCCTGGGCAAT +
Preference number: 2 (lower is better)
Translates to: ILCHTEPRVLTRNCFGHKRLGRM*LQSLGN
Trigger: ATTGCCCAGGCTCTGCAGCCACATCCGACCGAGTCG...TTTATGACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR CAA 90 bp AAGAACATCCAGTTTTGTCTTCCCTTCAAGGCCACATATGTCCTGTaGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTA +
Preference number: 2 (lower is better)
Translates to: KNIQFCLPFKATYVL*SPKHPVSVQDGLQL
Trigger: TAGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACATATGTGGCCTTGAAGGGAAGACAAAACTGGATGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR TCA 90 bp CTGACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTCTGAACCCCGTGTATTaGCAAGAAACTGCTTTGGTC +
Preference number: 2 (lower is better)
Translates to: LTSAQHLRICLSLEIPTTLNPVY*QETALV
Trigger: GACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAG...AGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR TCA 90 bp ATATGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTGACGGGTTAAGTCCATaGTTCTGTGTCATACTGAAC +
Preference number: 2 (lower is better)
Translates to: ICPVESKASSKCAGWASADGLSP*FCVILN
Trigger: GTTCAGTATGACACAGAATCATGGACTTAACCCGTC...AGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR TCA 90 bp ATATGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTCAAATTCCAGTTGGGTaGAAACTTCACTGGCCTTAC +
Preference number: 2 (lower is better)
Translates to: ICPVESKASSKCAGWASAQIPVG*KLHWPY
Trigger: GTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTG...AGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR TCA 90 bp AAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCGTGCATACTGTCCACTaGGAGGGATTCTGCAATGCC +
Preference number: 2 (lower is better)
Translates to: KLHWPYNQCSSCHPLNLVVHTVH*EGFCNA
Trigger: GGCATTGCAGAATCCCTCTCAGTGGACAGTATGCAC...GACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR TCA 90 bp GTCCTTACATACAGGTTTATCCATGGCCTTAGCTGCTGTTTTATAAAACCCTTTCCTGGTCTGATGGTCTaGCAAGCGCACAGCACTTGC +
Preference number: 2 (lower is better)
Translates to: VLTYRFIHGLSCCFIKPFPGLMV*QAHSTC
Trigger: GCAAGTGCTGTGCGCTTGTCAGACCATCAGACCAGG...AAAGGGTTTTATAAAACAGCAGCTAAGGCCATGGATAAACCTGTATGTAAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
3UTR-3UTR TCA 90 bp ACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTGGAGGTCCAGTATTGTaGTGCGGCTCCAAAGAAGCT +
Preference number: 2 (lower is better)
Translates to: TSAQHLRICLSLEIPTTFGGPVL*CGSKEA
Trigger: AGCTTCTTTGGAGCCGCATCACAATACTGGACCTCC...AAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR-3UTR GCA 90 bp ACAGTAAGTTGCCTTCTGATTGGTTGGCCCTGGTCTGATGGTCTGACAAGCGCAAATCAATGTTCCAGTTaGCATCCACTGAATTTGGTC +
Preference number: 2 (lower is better)
Translates to: TVSCLLIGWPWSDGLTSANQCSS*HPLNLV
Trigger: GACCAAATTCAGTGGATGGCAACTGGAACATTGATT...TGCGCTTGTCAGACCATCAGACCAGGGCCAACCAATCAGAAGGCAACTTACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR GCA 90 bp CTGACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTAGAGGGATTCTGCAATaGCCTTGGCGTCTTAAACAC +
Preference number: 2 (lower is better)
Translates to: LTSAQHLRICLSLEIPTTRGILQ*PWRLKH
Trigger: GTGTTTAAGACGCCAAGGGCATTGCAGAATCCCTCT...AGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR GCA 90 bp CACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGCTTACTGATCGTTTGTaGCCCTCCAAGGGGAGGACT +
Preference number: 2 (lower is better)
Translates to: HLRICLSLEIPTTFPSSGLTDRL*PSKGRT
Trigger: AGTCCTCCCCTTGGAGGGGCACAAACGATCAGTAAG...CCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR-3UTR GCA 90 bp ACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCTTACTGATCGTTTGTaGCCCTCCAAGGGGAGGACT +
Preference number: 2 (lower is better)
Translates to: TSAQHLRICLSLEIPTTFLTDRL*PSKGRT
Trigger: AGTCCTCCCCTTGGAGGGGCACAAACGATCAGTAAG...AAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR-3UTR CCA 90 bp CACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGCTGATTGGTTGGCCCTaGTCTGATGGTCTGACAAGC +
Preference number: 2 (lower is better)
Translates to: HLRICLSLEIPTTFPSSGLIGWP*SDGLTS
Trigger: GCTTGTCAGACCATCAGACCAGGGCCAACCAATCAG...CCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR TCA 90 bp GACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTCTGAACCCCGTGTATTaGCAAGAAACTGCTTTGGTC +
Preference number: 2 (lower is better)
Translates to: DKRTALANLLEFRNPYNFLNPVY*QETALV
Trigger: GACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAG...AAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR TCA 90 bp CTGACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTGATTCTGTGTCATACTaGACCCCGTGTATTGACAAG +
Preference number: 2 (lower is better)
Translates to: LTSAQHLRICLSLEIPTTDSVSY*TPCIDK
Trigger: CTTGTCAATACACGGGGTTCAGTATGACACAGAATC...AGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR TCA 90 bp AAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCTTTGACACTCAATCGTaGGGATTGGTCGGTGTGGGA +
Preference number: 2 (lower is better)
Translates to: KLHWPYNQCSSCHPLNLVFDTQS*GLVGVG
Trigger: TCCCACACCGACCAATCCTCACGATTGAGTGTCAAA...GACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR-3UTR TCA 90 bp CACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGCCCAAGCTCCTCTTCTaGCTGAGTCATAAGAAGGGT +
Preference number: 2 (lower is better)
Translates to: HLRICLSLEIPTTFPSSGPKLLF*LSHKKG
Trigger: ACCCTTCTTATGACTCAGTCAGAAGAGGAGCTTGGG...CCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR-3UTR TCA 90 bp CTGACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTGGGGAGGACTTTTGTTaGGGCCAGAATTCATGTTAT +
Preference number: 2 (lower is better)
Translates to: LTSAQHLRICLSLEIPTTGEDFC*GQNSCY
Trigger: ATAACATGAATTCTGGCCTCAACAAAAGTCCTCCCC...AGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR-3UTR TCA 90 bp GCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCGCTCTGTATTCTTACTaGTCGTTTGTGCCCCTCCAA +
Preference number: 2 (lower is better)
Translates to: ARRLRIQTGILAHGIIHLALYSY*SFVPLQ
Trigger: TTGGAGGGGCACAAACGATCAGTAAGAATACAGAGC...GAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR-3UTR TCA 90 bp TCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAGGAGGTCCAGTATTGTaGTGCGGCTCCAAAGAAGCT +
Preference number: 2 (lower is better)
Translates to: SIKFQLGENFTGLTINVPGGPVL*CGSKEA
Trigger: AGCTTCTTTGGAGCCGCATCACAATACTGGACCTCC...TGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR-3UTR GCA 90 bp ACAGTAAGTTGCCTTCTGATTGGTTGGCCCTGGTCTGATGGTCTGACAAGCGCACCAGTAATCTTAATATaGAACTCACAAGATGCTAGG +
Preference number: 2 (lower is better)
Translates to: TVSCLLIGWPWSDGLTSAPVILI*NSQDAR
Trigger: CCTAGCATCTTGTGAGTTGCATATTAAGATTACTGG...TGCGCTTGTCAGACCATCAGACCAGGGCCAACCAATCAGAAGGCAACTTACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR GCA 90 bp CTTGGCGTCTTAAACACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAGAGTGGTCAGCTGAGTaGATACTGTCCACTGAGAGG +
Preference number: 2 (lower is better)
Translates to: LGVLNTQTFFPSNSSWVKEWSAE*ILSTER
Trigger: CCTCTCAGTGGACAGTATGCACTCAGCTGACCACTC...TTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTGTTTAAGACGCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CCA 90 bp ATATGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTACTGAGAATTCAAACTaGCATACTGGCCCATGGAAT +
Preference number: 2 (lower is better)
Translates to: ICPVESKASSKCAGWASATENSN*HTGPWN
Trigger: ATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGT...AGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CCA 90 bp CTTGGCGTCTTAAACACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAACTGATTGGTTGGCCCTaGTCTGATGGTCTGACAAGC +
Preference number: 2 (lower is better)
Translates to: LGVLNTQTFFPSNSSWVKLIGWP*SDGLTS
Trigger: GCTTGTCAGACCATCAGACCAGGGCCAACCAATCAG...TTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTGTTTAAGACGCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CCA 90 bp ACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCTCAATCGTGAGGATTaGTCGGTGTGGGAGGTTGTA +
Preference number: 2 (lower is better)
Translates to: TSAQHLRICLSLEIPTTFLNRED*SVWEVV
Trigger: TACAACCTCCCACACCGACCAATCCTCACGATTGAG...AAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR-3UTR TCA 90 bp TCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTAAGATGCTAGGAGACTaGGAATTCAAACTGGCATAC +
Preference number: 2 (lower is better)
Translates to: SLALQSMFQLPSTEFGPPKMLGD*EFKLAY
Trigger: GTATGCCAGTTTGAATTCTCAGTCTCCTAGCATCTT...AGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR TCA 90 bp CACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTCTGAACCCCGTGTATTaGCAAGAAACTGCTTTGGTC +
Preference number: 2 (lower is better)
Translates to: HTNLLSIKFQLGENFTGLLNPVY*QETALV
Trigger: GACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAG...AAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR TCA 90 bp GCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCGATTCTGTGTCATACTaGACCCCGTGTATTGACAAG +
Preference number: 2 (lower is better)
Translates to: ARRLRIQTGILAHGIIHLDSVSY*TPCIDK
Trigger: CTTGTCAATACACGGGGTTCAGTATGACACAGAATC...GAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR TCA 90 bp GACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTGATTCTGTGTCATACTaGACCCCGTGTATTGACAAG +
Preference number: 2 (lower is better)
Translates to: DKRTALANLLEFRNPYNFDSVSY*TPCIDK
Trigger: CTTGTCAATACACGGGGTTCAGTATGACACAGAATC...AAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR TCA 90 bp ATCCAGTTTTGTCTTCCCTTCAAGGCCACATATGTCCTGTTGAGTCCAAAGCATGACGGGTTAAGTCCATaGTTCTGTGTCATACTGAAC +
Preference number: 2 (lower is better)
Translates to: IQFCLPFKATYVLLSPKHDGLSP*FCVILN
Trigger: GTTCAGTATGACACAGAATCATGGACTTAACCCGTC...ATGCTTTGGACTCAACAGGACATATGTGGCCTTGAAGGGAAGACAAAACTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR TCA 90 bp AGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGACGGGTTAAGTCCATaGTTCTGTGTCATACTGAAC +
Preference number: 2 (lower is better)
Translates to: SWVKTSLALQSMFQLPSTDGLSP*FCVILN
Trigger: GTTCAGTATGACACAGAATCATGGACTTAACCCGTC...AGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR TCA 90 bp CTTCTGCTGTACTGCAGTAGGTACATTCGAAAAATTCTTGATAGTGCAAGAAGTGTGCATACTGTCCACTaGGAGGGATTCTGCAATGCC +
Preference number: 2 (lower is better)
Translates to: LLLYCSRYIRKILDSARSVHTVH*EGFCNA
Trigger: GGCATTGCAGAATCCCTCTCAGTGGACAGTATGCAC...ACTTCTTGCACTATCAAGAATTTTTCGAATGTACCTACTGCAGTACAGCAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
3UTR-3UTR TCA 90 bp TGTTACACGCATTTCCAAAGCATTAAAGATCTAAATGGATTATCTTTTCCCTGCTGGTTGGCCCTGGTCTaGTGGTCTGACAAGCGCACA +
Preference number: 2 (lower is better)
Translates to: CYTHFQSIKDLNGLSFPCWLALV*WSDKRT
Trigger: TGTGCGCTTGTCAGACCATCAGACCAGGGCCAACCA...GCAGGGAAAAGATAATCCATTTAGATCTTTAATGCTTTGGAAATGCGTGTAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR TCA 90 bp TCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCATTTGACACTCAATCGTaGGGATTGGTCGGTGTGGGA +
Preference number: 2 (lower is better)
Translates to: SIKFQLGENFTGLTINVPFDTQS*GLVGVG
Trigger: TCCCACACCGACCAATCCTCACGATTGAGTGTCAAA...TGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR-3UTR CCA 90 bp AAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCCCATCAAATTCCAGTTaGGTGAAAACTTCACTGGCC +
Preference number: 2 (lower is better)
Translates to: KRTALANLLEFRNPYNFSPSNSS*VKTSLA
Trigger: GGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGG...GGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CCA 90 bp CTGACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTATTCTGCAATGCCCTTaGCGTCTTAAACACACAAAC +
Preference number: 2 (lower is better)
Translates to: LTSAQHLRICLSLEIPTTILQCP*RLKHTN
Trigger: GTTTGTGTGTTTAAGACGCCAAGGGCATTGCAGAAT...AGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CCA 90 bp TGTTACACGCATTTCCAAAGCATTAAAGATCTAAATGGATTATCTTTTCCCTGCTGTTGTAGAGGGTGGTaGCGCGGAGGAAGTCCTCCT +
Preference number: 2 (lower is better)
Translates to: CYTHFQSIKDLNGLSFPCCCRGW*RGGSPP
Trigger: AGGAGGACTTCCTCCGCGCCACCACCCTCTACAACA...GCAGGGAAAAGATAATCCATTTAGATCTTTAATGCTTTGGAAATGCGTGTAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429175.7
3UTR CAA 90 bp CCTTGGCGTCTTAAACACACAAACCTTCTTTCCATCAAATTCCAGTaGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCC +
Preference number: 2 (lower is better)
Translates to: PWRLKHTNLLSIKFQ*GENFTGLTINVPVA
Trigger: GGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTGTTTAAGACGCCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR TCA 90 bp AAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGATGCTAGGAGACTaGGAATTCAAACTGGCATAC +
Preference number: 2 (lower is better)
Translates to: KRTALANLLEFRNPYNFSKMLGD*EFKLAY
Trigger: GTATGCCAGTTTGAATTCTCAGTCTCCTAGCATCTT...GGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR TCA 90 bp TCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCACTGAACCCCGTGTATTaGCAAGAAACTGCTTTGGTC +
Preference number: 2 (lower is better)
Translates to: SIKFQLGENFTGLTINVPLNPVY*QETALV
Trigger: GACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAG...TGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR TCA 90 bp CACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGGACGGGTTAAGTCCATaGTTCTGTGTCATACTGAAC +
Preference number: 2 (lower is better)
Translates to: HLRICLSLEIPTTFPSSGDGLSP*FCVILN
Trigger: GTTCAGTATGACACAGAATCATGGACTTAACCCGTC...CCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR TCA 90 bp ATCCAGTTTTGTCTTCCCTTCAAGGCCACATATGTCCTGTTGAGTCCAAAGCATTCTCAAACCAGAACATaGCGGGTTAAGTCCATGATT +
Preference number: 2 (lower is better)
Translates to: IQFCLPFKATYVLLSPKHSQTRT*RVKSMI
Trigger: AATCATGGACTTAACCCGTCATGTTCTGGTTTGAGA...ATGCTTTGGACTCAACAGGACATATGTGGCCTTGAAGGGAAGACAAAACTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR TCA 90 bp GCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCTCTCAAACCAGAACATaGCGGGTTAAGTCCATGATT +
Preference number: 2 (lower is better)
Translates to: ARRLRIQTGILAHGIIHLSQTRT*RVKSMI
Trigger: AATCATGGACTTAACCCGTCATGTTCTGGTTTGAGA...GAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR TCA 90 bp ATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTCATAAACCCAAGCTCCTCTTCTaGCTGAGTCATAAGAAGGGT +
Preference number: 2 (lower is better)
Translates to: ILCHTEPRVLTRNCFGHKPKLLF*LSHKKG
Trigger: ACCCTTCTTATGACTCAGTCAGAAGAGGAGCTTGGG...TTTATGACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR-3UTR GCA 90 bp ATATGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTCCAGTAATCTTAATATaGAACTCACAAGATGCTAGG +
Preference number: 2 (lower is better)
Translates to: ICPVESKASSKCAGWASAPVILI*NSQDAR
Trigger: CCTAGCATCTTGTGAGTTGCATATTAAGATTACTGG...AGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CCA 90 bp CTGACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTCAAACTGGCATACTaGCCCATGGAATTATTCATC +
Preference number: 2 (lower is better)
Translates to: LTSAQHLRICLSLEIPTTFKLAY*PMELFI
Trigger: GATGAATAATTCCATGGGCCAGTATGCCAGTTTGAA...AGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CCA 90 bp ATCCAGTTTTGTCTTCCCTTCAAGGCCACATATGTCCTGTTGAGTCCAAAGCATACTGAGAATTCAAACTaGCATACTGGCCCATGGAAT +
Preference number: 2 (lower is better)
Translates to: IQFCLPFKATYVLLSPKHTENSN*HTGPWN
Trigger: ATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGT...ATGCTTTGGACTCAACAGGACATATGTGGCCTTGAAGGGAAGACAAAACTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CCA 90 bp GACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTATTCTGCAATGCCCTTaGCGTCTTAAACACACAAAC +
Preference number: 2 (lower is better)
Translates to: DKRTALANLLEFRNPYNFILQCP*RLKHTN
Trigger: GTTTGTGTGTTTAAGACGCCAAGGGCATTGCAGAAT...AAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CCA 90 bp AAACTGGAGACAAATGTTCCGAAACACATCCCATTTCATTTAGGTAGACATGTTCTGATTGGTTGGCCCTaGTCTGATGGTCTGACAAGC +
Preference number: 2 (lower is better)
Translates to: KLETNVPKHIPFHLGRHVLIGWP*SDGLTS
Trigger: GCTTGTCAGACCATCAGACCAGGGCCAACCAATCAG...AACATGTCTACCTAAATGAAATGGGATGTGTTTCGGAACATTTGTCTCCAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
3UTR-3UTR CCA 90 bp AAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCTTGCCATCCATGTTCTaGAAAAAGGATGTGTCGATC +
Preference number: 2 (lower is better)
Translates to: KRTALANLLEFRNPYNFSLPSMF*KKDVSI
Trigger: GATCGACACATCCTTTTTCCAGAACATGGATGGCAA...GGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429175.7
3UTR-3UTR TCA 90 bp TCCATGATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTAAGATGCTAGGAGACTaGGAATTCAAACTGGCATAC +
Preference number: 2 (lower is better)
Translates to: SMILCHTEPRVLTRNCFGKMLGD*EFKLAY
Trigger: GTATGCCAGTTTGAATTCTCAGTCTCCTAGCATCTT...ACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAATCATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR TCA 90 bp TGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTAAAAAAGATGCTAGGAGACTaGGAATTCAAACTGGCATAC +
Preference number: 2 (lower is better)
Translates to: WPYNQCSSCHPLNLVLLKKMLGD*EFKLAY
Trigger: GTATGCCAGTTTGAATTCTCAGTCTCCTAGCATCTT...TTTTAGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR TCA 90 bp ACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTAAGATGCTAGGAGACTaGGAATTCAAACTGGCATAC +
Preference number: 2 (lower is better)
Translates to: TSAQHLRICLSLEIPTTFKMLGD*EFKLAY
Trigger: GTATGCCAGTTTGAATTCTCAGTCTCCTAGCATCTT...AAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR TCA 90 bp TCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAGATTCTGTGTCATACTaGACCCCGTGTATTGACAAG +
Preference number: 2 (lower is better)
Translates to: SIKFQLGENFTGLTINVPDSVSY*TPCIDK
Trigger: CTTGTCAATACACGGGGTTCAGTATGACACAGAATC...TGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR TCA 90 bp CACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGAACTGTCCTCAGCACTaGGAGAAGGAACCATTTATT +
Preference number: 2 (lower is better)
Translates to: HLRICLSLEIPTTFPSSGNCPQH*EKEPFI
Trigger: AATAAATGGTTCCTTCTCTCAGTGCTGAGGACAGTT...CCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
3UTR-3UTR TCA 90 bp ACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTAAGAAGGGTCTTCTTTaGCACTCAATCGTGAGGATT +
Preference number: 2 (lower is better)
Translates to: TSAQHLRICLSLEIPTTFKKGLL*HSIVRI
Trigger: AATCCTCACGATTGAGTGTCAAAGAAGACCCTTCTT...AAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR-3UTR TCA 90 bp ATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTCATAAAAGCTCCTCTTCTGACTaGGTCATAAGAAGGGTCTTC +
Preference number: 2 (lower is better)
Translates to: ILCHTEPRVLTRNCFGHKSSSSD*VIRRVF
Trigger: GAAGACCCTTCTTATGACTCAGTCAGAAGAGGAGCT...TTTATGACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR-3UTR GCA 90 bp TCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTCCAGTAATCTTAATATaGAACTCACAAGATGCTAGG +
Preference number: 2 (lower is better)
Translates to: SLALQSMFQLPSTEFGPPPVILI*NSQDAR
Trigger: CCTAGCATCTTGTGAGTTGCATATTAAGATTACTGG...AGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR GCA 90 bp AAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCATTTATACAGTAAGTTaGCTTCTGATTGGTTGGCCC +
Preference number: 2 (lower is better)
Translates to: KRTALANLLEFRNPYNFSIYTVS*LLIGWP
Trigger: GGGCCAACCAATCAGAAGGCAACTTACTGTATAAAT...GGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CCA 90 bp TCCATGATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTACTGAGAATTCAAACTaGCATACTGGCCCATGGAAT +
Preference number: 2 (lower is better)
Translates to: SMILCHTEPRVLTRNCFGTENSN*HTGPWN
Trigger: ATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGT...ACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAATCATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CCA 90 bp CACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGACTGAGAATTCAAACTaGCATACTGGCCCATGGAAT +
Preference number: 2 (lower is better)
Translates to: HLRICLSLEIPTTFPSSGTENSN*HTGPWN
Trigger: ATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGT...CCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CCA 90 bp TGTTACACGCATTTCCAAAGCATTAAAGATCTAAATGGATTATCTTTTCCCTGCCTGATTGGTTGGCCCTaGTCTGATGGTCTGACAAGC +
Preference number: 2 (lower is better)
Translates to: CYTHFQSIKDLNGLSFPCLIGWP*SDGLTS
Trigger: GCTTGTCAGACCATCAGACCAGGGCCAACCAATCAG...GCAGGGAAAAGATAATCCATTTAGATCTTTAATGCTTTGGAAATGCGTGTAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR TCA 90 bp ATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTCATAAAGATTCTGTGTCATACTaGACCCCGTGTATTGACAAG +
Preference number: 2 (lower is better)
Translates to: ILCHTEPRVLTRNCFGHKDSVSY*TPCIDK
Trigger: CTTGTCAATACACGGGGTTCAGTATGACACAGAATC...TTTATGACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR TCA 90 bp TCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCATCTCAAACCAGAACATaGCGGGTTAAGTCCATGATT +
Preference number: 2 (lower is better)
Translates to: SIKFQLGENFTGLTINVPSQTRT*RVKSMI
Trigger: AATCATGGACTTAACCCGTCATGTTCTGGTTTGAGA...TGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR TCA 90 bp CTTGGCGTCTTAAACACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAATCTCAAACCAGAACATaGCGGGTTAAGTCCATGATT +
Preference number: 2 (lower is better)
Translates to: LGVLNTQTFFPSNSSWVKSQTRT*RVKSMI
Trigger: AATCATGGACTTAACCCGTCATGTTCTGGTTTGAGA...TTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTGTTTAAGACGCCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR GCA 90 bp GCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCCCAGTAATCTTAATATaGAACTCACAAGATGCTAGG +
Preference number: 2 (lower is better)
Translates to: ARRLRIQTGILAHGIIHLPVILI*NSQDAR
Trigger: CCTAGCATCTTGTGAGTTGCATATTAAGATTACTGG...GAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR GCA 90 bp ACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTATTTATACAGTAAGTTaGCTTCTGATTGGTTGGCCC +
Preference number: 2 (lower is better)
Translates to: TSAQHLRICLSLEIPTTFIYTVS*LLIGWP
Trigger: GGGCCAACCAATCAGAAGGCAACTTACTGTATAAAT...AAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CCA 90 bp TGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTAAAATTCAAACTGGCATACTaGCCCATGGAATTATTCATC +
Preference number: 2 (lower is better)
Translates to: WPYNQCSSCHPLNLVLLKFKLAY*PMELFI
Trigger: GATGAATAATTCCATGGGCCAGTATGCCAGTTTGAA...TTTTAGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR CAA 90 bp CTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTaGGTCCTCCTAAAATTAGATTATAAGCTTCCCACCTCTATTTGT +
Preference number: 2 (lower is better)
Translates to: LHWPYNQCSSCHPLN*VLLKLDYKLPTSIC
Trigger: ACAAATAGAGGTGGGAAGCTTATAATCTAATTTTAGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR TCA 90 bp TTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTCTCAAACCAGAACATaGCGGGTTAAGTCCATGATT +
Preference number: 2 (lower is better)
Translates to: FFPSNSSWVKTSLALQSMSQTRT*RVKSMI
Trigger: AATCATGGACTTAACCCGTCATGTTCTGGTTTGAGA...CATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR TCA 90 bp ATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTCATAAATCTCAAACCAGAACATaGCGGGTTAAGTCCATGATT +
Preference number: 2 (lower is better)
Translates to: ILCHTEPRVLTRNCFGHKSQTRT*RVKSMI
Trigger: AATCATGGACTTAACCCGTCATGTTCTGGTTTGAGA...TTTATGACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR TCA 90 bp GTCCTTACATACAGGTTTATCCATGGCCTTAGCTGCTGTTTTATAAAACCCTTTGTAAAACTGCTTTTGTaGCCGAGGTCAACTCGTTTA +
Preference number: 2 (lower is better)
Translates to: VLTYRFIHGLSCCFIKPFVKLLL*PRSTRL
Trigger: TAAACGAGTTGACCTCGGTCACAAAAGCAGTTTTAC...AAAGGGTTTTATAAAACAGCAGCTAAGGCCATGGATAAACCTGTATGTAAGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
3UTR-3UTR TCA 90 bp CTTCTGCTGTACTGCAGTAGGTACATTCGAAAAATTCTTGATAGTGCAAGAAGTAACTGTCCTCAGCACTaGGAGAAGGAACCATTTATT +
Preference number: 2 (lower is better)
Translates to: LLLYCSRYIRKILDSARSNCPQH*EKEPFI
Trigger: AATAAATGGTTCCTTCTCTCAGTGCTGAGGACAGTT...ACTTCTTGCACTATCAAGAATTTTTCGAATGTACCTACTGCAGTACAGCAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
3UTR-3UTR GCA 90 bp TGTTACACGCATTTCCAAAGCATTAAAGATCTAAATGGATTATCTTTTCCCTGCAGAGGGATTCTGCAATaGCCTTGGCGTCTTAAACAC +
Preference number: 2 (lower is better)
Translates to: CYTHFQSIKDLNGLSFPCRGILQ*PWRLKH
Trigger: GTGTTTAAGACGCCAAGGGCATTGCAGAATCCCTCT...GCAGGGAAAAGATAATCCATTTAGATCTTTAATGCTTTGGAAATGCGTGTAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR GCA 90 bp ATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTCATAAACAGCACTTGCGAATCTaGTTGAGTTTAGAAATCCCT +
Preference number: 2 (lower is better)
Translates to: ILCHTEPRVLTRNCFGHKQHLRI*LSLEIP
Trigger: AGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTG...TTTATGACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR GCA 90 bp TCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAATTTATACAGTAAGTTaGCTTCTGATTGGTTGGCCC +
Preference number: 2 (lower is better)
Translates to: SIKFQLGENFTGLTINVPIYTVS*LLIGWP
Trigger: GGGCCAACCAATCAGAAGGCAACTTACTGTATAAAT...TGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR GCA 90 bp TCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCATTCCCTGCTTGTGTATaGCTGTTAAATAACTGTACC +
Preference number: 2 (lower is better)
Translates to: SIKFQLGENFTGLTINVPFPACV*LLNNCT
Trigger: GGTACAGTTATTTAACAGGCATACACAAGCAGGGAA...TGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR GCA 90 bp CACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGGGATTATCTTTTCCCTaGTTGTGTATGCCTGTTAAA +
Preference number: 2 (lower is better)
Translates to: HLRICLSLEIPTTFPSSGGLSFP*LCMPVK
Trigger: TTTAACAGGCATACACAAGCAGGGAAAAGATAATCC...CCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CCA 90 bp TCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCATGGCATACTGGCCCATaGAATTATTCATCTCTTTGT +
Preference number: 2 (lower is better)
Translates to: SIKFQLGENFTGLTINVPWHTGP*NYSSLC
Trigger: ACAAAGAGATGAATAATTCCATGGGCCAGTATGCCA...TGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR TCA 90 bp AAACTGGAGACAAATGTTCCGAAACACATCCCATTTCATTTAGGTAGACATGTTAACTGTCCTCAGCACTaGGAGAAGGAACCATTTATT +
Preference number: 2 (lower is better)
Translates to: KLETNVPKHIPFHLGRHVNCPQH*EKEPFI
Trigger: AATAAATGGTTCCTTCTCTCAGTGCTGAGGACAGTT...AACATGTCTACCTAAATGAAATGGGATGTGTTTCGGAACATTTGTCTCCAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
3UTR-3UTR GCA 90 bp CTTCTGCTGTACTGCAGTAGGTACATTCGAAAAATTCTTGATAGTGCAAGAAGTCAGAGCTGTGATTATTaGAGTACTGTTACACGCATT +
Preference number: 2 (lower is better)
Translates to: LLLYCSRYIRKILDSARSQSCDY*STVTRI
Trigger: AATGCGTGTAACAGTACTGCAATAATCACAGCTCTG...ACTTCTTGCACTATCAAGAATTTTTCGAATGTACCTACTGCAGTACAGCAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
3UTR-3UTR GCA 90 bp GTCCTTACATACAGGTTTATCCATGGCCTTAGCTGCTGTTTTATAAAACCCTTTTACCTTCTGCTGTACTaGAGTAGGTACATTCGAAAA +
Preference number: 2 (lower is better)
Translates to: VLTYRFIHGLSCCFIKPFYLLLY*SRYIRK
Trigger: TTTTCGAATGTACCTACTGCAGTACAGCAGAAGGTA...AAAGGGTTTTATAAAACAGCAGCTAAGGCCATGGATAAACCTGTATGTAAGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
3UTR-3UTR CCA 90 bp ATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTCATAAATGGCATACTGGCCCATaGAATTATTCATCTCTTTGT +
Preference number: 2 (lower is better)
Translates to: ILCHTEPRVLTRNCFGHKWHTGP*NYSSLC
Trigger: ACAAAGAGATGAATAATTCCATGGGCCAGTATGCCA...TTTATGACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CCA 90 bp TGTTACACGCATTTCCAAAGCATTAAAGATCTAAATGGATTATCTTTTCCCTGCCCATCAAATTCCAGTTaGGTGAAAACTTCACTGGCC +
Preference number: 2 (lower is better)
Translates to: CYTHFQSIKDLNGLSFPCPSNSS*VKTSLA
Trigger: GGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGG...GCAGGGAAAAGATAATCCATTTAGATCTTTAATGCTTTGGAAATGCGTGTAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR TCA 90 bp TGTTACACGCATTTCCAAAGCATTAAAGATCTAAATGGATTATCTTTTCCCTGCGTAAAACTGCTTTTGTaGCCGAGGTCAACTCGTTTA +
Preference number: 2 (lower is better)
Translates to: CYTHFQSIKDLNGLSFPCVKLLL*PRSTRL
Trigger: TAAACGAGTTGACCTCGGTCACAAAAGCAGTTTTAC...GCAGGGAAAAGATAATCCATTTAGATCTTTAATGCTTTGGAAATGCGTGTAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR GCA 90 bp GTCCTTACATACAGGTTTATCCATGGCCTTAGCTGCTGTTTTATAAAACCCTTTGGATTATCTTTTCCCTaGTTGTGTATGCCTGTTAAA +
Preference number: 2 (lower is better)
Translates to: VLTYRFIHGLSCCFIKPFGLSFP*LCMPVK
Trigger: TTTAACAGGCATACACAAGCAGGGAAAAGATAATCC...AAAGGGTTTTATAAAACAGCAGCTAAGGCCATGGATAAACCTGTATGTAAGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
3UTR-3UTR CCA 90 bp TGTTACACGCATTTCCAAAGCATTAAAGATCTAAATGGATTATCTTTTCCCTGCACTGAGAATTCAAACTaGCATACTGGCCCATGGAAT +
Preference number: 2 (lower is better)
Translates to: CYTHFQSIKDLNGLSFPCTENSN*HTGPWN
Trigger: ATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGT...GCAGGGAAAAGATAATCCATTTAGATCTTTAATGCTTTGGAAATGCGTGTAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CCA 90 bp TGTTACACGCATTTCCAAAGCATTAAAGATCTAAATGGATTATCTTTTCCCTGCTGGCATACTGGCCCATaGAATTATTCATCTCTTTGT +
Preference number: 2 (lower is better)
Translates to: CYTHFQSIKDLNGLSFPCWHTGP*NYSSLC
Trigger: ACAAAGAGATGAATAATTCCATGGGCCAGTATGCCA...GCAGGGAAAAGATAATCCATTTAGATCTTTAATGCTTTGGAAATGCGTGTAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR CCA 72 bp GCCTCCTCCAGCCAGCGCAAGCCCTGCGTGCGGCCATaGGGCTCCACGGCTGCCGCTCAGGGTGGGTACAGG +
Preference number: 3 (lower is better)
Translates to: ASSSQRKPCVRP*GSTAAAQGGYR
Trigger: CCTGTACCCACCCTGAGCGGCAGCCGTGGAGCCCCATGGCCGCACGCAGGGCTTGCGCTGGCTGGAGGAGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429175.7
3UTR GCA 72 bp GCGCAAGCCCTGCGTGCGGCCATGGGGCTCCACGGCTaGCGCTCAGGGTGGGTACAGGTGAAGCCCAGCATA +
Preference number: 3 (lower is better)
Translates to: AQALRAAMGLHG*RSGWVQVKPSI
Trigger: TATGCTGGGCTTCACCTGTACCCACCCTGAGCGGCAGCCGTGGAGCCCCATGGCCGCACGCAGGGCTTGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429175.7
3UTR GCA 72 bp GCTGCAGTCCACCGGAGACTCCCTCGCCCGCTCGCCTaGCAGTCCTCCCTCCATTCTTGCAGCTCCCAAGCA +
Preference number: 3 (lower is better)
Translates to: AAVHRRLPRPLA*QSSLHSCSSQA
Trigger: TGCTTGGGAGCTGCAAGAATGGAGGGAGGACTGGCAGGCGAGCGGGCGAGGGAGTCTCCGGTGGACTGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429175.7
3UTR CCA 72 bp CGTGCGGCCATGGGGCTCCACGGCTGCCGCTCAGGGTaGGTACAGGTGAAGCCCAGCATAAAAGGCTGCTCT +
Preference number: 3 (lower is better)
Translates to: RAAMGLHGCRSG*VQVKPSIKGCS
Trigger: AGAGCAGCCTTTTATGCTGGGCTTCACCTGTACCCACCCTGAGCGGCAGCCGTGGAGCCCCATGGCCGCACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429175.7
3UTR CCA 72 bp GGATCTGCCCGCTTCCAGGGTTGGCTAGGCGACTGCTaGTCGGGCCCAGGATCTGATACGGATCTGGCTGGG +
Preference number: 3 (lower is better)
Translates to: GSARFQGWLGDC*SGPGSDTDLAG
Trigger: CCCAGCCAGATCCGTATCAGATCCTGGGCCCGACCAGCAGTCGCCTAGCCAACCCTGGAAGCGGGCAGATCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR GCA 72 bp GCTGGATCTGCCCGCTTCCAGGGTTGGCTAGGCGACTaGTGGTCGGGCCCAGGATCTGATACGGATCTGGCT +
Preference number: 3 (lower is better)
Translates to: AGSARFQGWLGD*WSGPGSDTDLA
Trigger: AGCCAGATCCGTATCAGATCCTGGGCCCGACCAGCAGTCGCCTAGCCAACCCTGGAAGCGGGCAGATCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR CCA 72 bp AGCAGGGCGCTTATTCTTTGCTGGAGTGGCAGAAGGTaGCCGTCTGGGTCTGAAGTGCCCAGGGGAGGCTGC +
Preference number: 3 (lower is better)
Translates to: SRALILCWSGRR*PSGSEVPRGGC
Trigger: GCAGCCTCCCCTGGGCACTTCAGACCCAGACGGCCACCTTCTGCCACTCCAGCAAAGAATAAGCGCCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
3UTR-3UTR CAA 90 bp TGGCTAGGCGACTGCTGGTCGGGCCCAGGATCTGATACGGATCTGGCTGGGGCCGCCACATATGTCCTGTaGAGTCCAAAGCATCCAGTA +
Preference number: 3 (lower is better)
Translates to: WLGDCWSGPGSDTDLAGAATYVL*SPKHPV
Trigger: TACTGGATGCTTTGGACTCAACAGGACATATGTGGC...GGCCCCAGCCAGATCCGTATCAGATCCTGGGCCCGACCAGCAGTCGCCTAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR CCA 72 bp CTGAGACCTGAAGGAAGCAGGGCGCTTATTCTTTGCTaGAGTGGCAGAAGGTGGCCGTCTGGGTCTGAAGTG +
Preference number: 3 (lower is better)
Translates to: LRPEGSRALILC*SGRRWPSGSEV
Trigger: CACTTCAGACCCAGACGGCCACCTTCTGCCACTCCAGCAAAGAATAAGCGCCCTGCTTCCTTCAGGTCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
3UTR CCA 72 bp GGCCATTCTTCTCGTCCATATAGCTGTTGTAGTTCATaGGGTTGGACTCGCCTCCGCCCACCAGCTTGCTGC +
Preference number: 3 (lower is better)
Translates to: GHSSRPYSCCSS*GWTRLRPPACC
Trigger: GCAGCAAGCTGGTGGGCGGAGGCGAGTCCAACCCCATGAACTACAACAGCTATATGGACGAGAAGAATGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429175.7
3UTR CCA 72 bp TCTTCTCGTCCATATAGCTGTTGTAGTTCATGGGGTTaGACTCGCCTCCGCCCACCAGCTTGCTGCATTTGC +
Preference number: 3 (lower is better)
Translates to: SSRPYSCCSSWG*TRLRPPACCIC
Trigger: GCAAATGCAGCAAGCTGGTGGGCGGAGGCGAGTCCAACCCCATGAACTACAACAGCTATATGGACGAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429175.7
3UTR-3UTR CAA 90 bp AAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCTGCCCGCTTCCAGGGTaGGCTAGGCGACTGCTGGTC +
Preference number: 3 (lower is better)
Translates to: KRTALANLLEFRNPYNFSCPLPG*ARRLLV
Trigger: GACCAGCAGTCGCCTAGCCAACCCTGGAAGCGGGCA...GGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR CCA 72 bp GGTGTGACAACAGCACTTCCGTGTTGTAGAGGGTGGTaGCGCGGAGGAAGTCCTCCTTGTTCATTTTACACA +
Preference number: 3 (lower is better)
Translates to: GVTTALPCCRGW*RGGSPPCSFYT
Trigger: TGTGTAAAATGAACAAGGAGGACTTCCTCCGCGCCACCACCCTCTACAACACGGAAGTGCTGTTGTCACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429175.7
3UTR-3UTR CAA 90 bp ACAGTAAGTTGCCTTCTGATTGGTTGGCCCTGGTCTGATGGTCTGACAAGCGCAATTCTTACTGATCGTTaGTGCCCCTCCAAGGGGAGG +
Preference number: 3 (lower is better)
Translates to: TVSCLLIGWPWSDGLTSAILTDR*CPSKGR
Trigger: CCTCCCCTTGGAGGGGCACAAACGATCAGTAAGAAT...TGCGCTTGTCAGACCATCAGACCAGGGCCAACCAATCAGAAGGCAACTTACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR-3UTR CAA 90 bp GGTCAGCTGAGTGCATACTGTCCACTGAGAGGGATTCTGCAATGCCCTTGGCGTACTGAACCCCGTGTATaGACAAGAAACTGCTTTGGT +
Preference number: 3 (lower is better)
Translates to: GQLSAYCPLRGILQCPWRTEPRV*TRNCFG
Trigger: ACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGT...ACGCCAAGGGCATTGCAGAATCCCTCTCAGTGGACAGTATGCACTCAGCTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CAA 90 bp TGTGATGCGGCTCCAAAGAAGCTGGAGGAAGTGACAGGCATGGAGGATGGATGGAGGGGAGGACTTTTGTaGAGGCCAGAATTCATGTTA +
Preference number: 3 (lower is better)
Translates to: CDAAPKKLEEVTGMEDGWRGGLL*RPEFML
Trigger: TAACATGAATTCTGGCCTCAACAAAAGTCCTCCCCT...CCATCCATCCTCCATGCCTGTCACTTCCTCCAGCTTCTTTGGAGCCGCATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR TCA 72 bp TACAGTAAGTTGCCTTCTGATTGGTTGGCCCTGGTCTaGTGGTCTGACAAGCGCACAGCACTTGCGAATCTG +
Preference number: 3 (lower is better)
Translates to: YSKLPSDWLALV*WSDKRTALANL
Trigger: CAGATTCGCAAGTGCTGTGCGCTTGTCAGACCATCAGACCAGGGCCAACCAATCAGAAGGCAACTTACTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR GCA 72 bp ACGACTCGGTCGGATGTGGCTGCAGAGCCTGGGCAATaGCGTGGAAGTCAAATTTGTAAGCATATCTTTTGC +
Preference number: 3 (lower is better)
Translates to: TTRSDVAAEPGQ*RGSQICKHIFC
Trigger: GCAAAAGATATGCTTACAAATTTGACTTCCACGGCATTGCCCAGGCTCTGCAGCCACATCCGACCGAGTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR CCA 72 bp AGGGGAGGCTGCAGAGTTAAATCTCACAGACCAGTCTaGATAGACCAGCTCGCTTTGCTCCAGTCCTTACAT +
Preference number: 3 (lower is better)
Translates to: RGGCRVKSHRPV*IDQLALLQSLH
Trigger: ATGTAAGGACTGGAGCAAAGCGAGCTGGTCTATCCAGACTGGTCTGTGAGATTTAACTCTGCAGCCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
3UTR-3UTR CAA 90 bp ACAGTAAGTTGCCTTCTGATTGGTTGGCCCTGGTCTGATGGTCTGACAAGCGCATCCATCAAATTCCAGTaGGGTGAAAACTTCACTGGC +
Preference number: 3 (lower is better)
Translates to: TVSCLLIGWPWSDGLTSASIKFQ*GENFTG
Trigger: GCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA...TGCGCTTGTCAGACCATCAGACCAGGGCCAACCAATCAGAAGGCAACTTACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CAA 90 bp GACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTACCAGCTTGCTGCATTaGCTAACGCTGCAGTCCACC +
Preference number: 3 (lower is better)
Translates to: DKRTALANLLEFRNPYNFTSLLH*LTLQST
Trigger: GGTGGACTGCAGCGTTAGCAAATGCAGCAAGCTGGT...AAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429175.7
3UTR-3UTR CAA 90 bp CTTGGCGTCTTAAACACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAACCTCCGCCCACCAGCTaGCTGCATTTGCTAACGCTG +
Preference number: 3 (lower is better)
Translates to: LGVLNTQTFFPSNSSWVKPPPTS*LHLLTL
Trigger: CAGCGTTAGCAAATGCAGCAAGCTGGTGGGCGGAGG...TTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTGTTTAAGACGCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429175.7
3UTR-3UTR CAA 90 bp ATATGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTCCAAGGGGAGGACTTTaGTTGAGGCCAGAATTCATG +
Preference number: 3 (lower is better)
Translates to: ICPVESKASSKCAGWASAPRGGL*LRPEFM
Trigger: CATGAATTCTGGCCTCAACAAAAGTCCTCCCCTTGG...AGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR GCA 72 bp CTGAGTGCATACTGTCCACTGAGAGGGATTCTGCAATaGCCTTGGCGTCTTAAACACACAAACCTTCTTTCC +
Preference number: 3 (lower is better)
Translates to: LSAYCPLRGILQ*PWRLKHTNLLS
Trigger: GGAAAGAAGGTTTGTGTGTTTAAGACGCCAAGGGCATTGCAGAATCCCTCTCAGTGGACAGTATGCACTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR CCA 72 bp ATTTATACAGTAAGTTGCCTTCTGATTGGTTGGCCCTaGTCTGATGGTCTGACAAGCGCACAGCACTTGCGA +
Preference number: 3 (lower is better)
Translates to: IYTVSCLLIGWP*SDGLTSAQHLR
Trigger: TCGCAAGTGCTGTGCGCTTGTCAGACCATCAGACCAGGGCCAACCAATCAGAAGGCAACTTACTGTATAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CAA 90 bp ACAGTAAGTTGCCTTCTGATTGGTTGGCCCTGGTCTGATGGTCTGACAAGCGCAGCTTCCCACCTCTATTaGTCACTAAATCTCAAACCA +
Preference number: 3 (lower is better)
Translates to: TVSCLLIGWPWSDGLTSAASHLY*SLNLKP
Trigger: TGGTTTGAGATTTAGTGACAAATAGAGGTGGGAAGC...TGCGCTTGTCAGACCATCAGACCAGGGCCAACCAATCAGAAGGCAACTTACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CAA 90 bp ACAGTAAGTTGCCTTCTGATTGGTTGGCCCTGGTCTGATGGTCTGACAAGCGCACAATCAATGTTCCAGTaGCCATCCACTGAATTTGGT +
Preference number: 3 (lower is better)
Translates to: TVSCLLIGWPWSDGLTSAQSMFQ*PSTEFG
Trigger: ACCAAATTCAGTGGATGGCAACTGGAACATTGATTG...TGCGCTTGTCAGACCATCAGACCAGGGCCAACCAATCAGAAGGCAACTTACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CAA 90 bp ATATGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTACTGAACCCCGTGTATaGACAAGAAACTGCTTTGGT +
Preference number: 3 (lower is better)
Translates to: ICPVESKASSKCAGWASATEPRV*TRNCFG
Trigger: ACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGT...AGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CAA 90 bp AAGTGTGCAGGATGGGCTTCAGCTAGAAGGCCACTGATGAGTAAGCTTCTAGTATCCATCAAATTCCAGTaGGGTGAAAACTTCACTGGC +
Preference number: 3 (lower is better)
Translates to: KCAGWASARRPLMSKLLVSIKFQ*GENFTG
Trigger: GCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA...TACTAGAAGCTTACTCATCAGTGGCCTTCTAGCTGAAGCCCATCCTGCACACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR-3UTR CAA 90 bp AGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGCCACATATGTCCTGTaGAGTCCAAAGCATCCAGTA +
Preference number: 3 (lower is better)
Translates to: SWVKTSLALQSMFQLPSTATYVL*SPKHPV
Trigger: TACTGGATGCTTTGGACTCAACAGGACATATGTGGC...AGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CAA 90 bp ATCCAGTTTTGTCTTCCCTTCAAGGCCACATATGTCCTGTTGAGTCCAAAGCATGCCACATATGTCCTGTaGAGTCCAAAGCATCCAGTA +
Preference number: 3 (lower is better)
Translates to: IQFCLPFKATYVLLSPKHATYVL*SPKHPV
Trigger: TACTGGATGCTTTGGACTCAACAGGACATATGTGGC...ATGCTTTGGACTCAACAGGACATATGTGGCCTTGAAGGGAAGACAAAACTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CAA 90 bp TCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTACTGAACCCCGTGTATaGACAAGAAACTGCTTTGGT +
Preference number: 3 (lower is better)
Translates to: SLALQSMFQLPSTEFGPPTEPRV*TRNCFG
Trigger: ACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGT...AGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CAA 90 bp AAGTGTGCAGGATGGGCTTCAGCTAGAAGGCCACTGATGAGTAAGCTTCTAGTACACTTGCGAATCTGCTaGAGTTTAGAAATCCCTACA +
Preference number: 3 (lower is better)
Translates to: KCAGWASARRPLMSKLLVHLRIC*SLEIPT
Trigger: TGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG...TACTAGAAGCTTACTCATCAGTGGCCTTCTAGCTGAAGCCCATCCTGCACACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR-3UTR CAA 90 bp ATCCAGTTTTGTCTTCCCTTCAAGGCCACATATGTCCTGTTGAGTCCAAAGCATCCAGAATTCATGTTATaGCCCCAAGCTCCTCTTCTG +
Preference number: 3 (lower is better)
Translates to: IQFCLPFKATYVLLSPKHPEFML*PQAPLL
Trigger: CAGAAGAGGAGCTTGGGGCAATAACATGAATTCTGG...ATGCTTTGGACTCAACAGGACATATGTGGCCTTGAAGGGAAGACAAAACTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR-3UTR CAA 90 bp CTTGGCGTCTTAAACACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAATTCTTACTGATCGTTaGTGCCCCTCCAAGGGGAGG +
Preference number: 3 (lower is better)
Translates to: LGVLNTQTFFPSNSSWVKILTDR*CPSKGR
Trigger: CCTCCCCTTGGAGGGGCACAAACGATCAGTAAGAAT...TTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTGTTTAAGACGCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR-3UTR CAA 90 bp AAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCATCTGGCTGGGGCCGTaGCTCTGTATTCTTACTGAT +
Preference number: 3 (lower is better)
Translates to: KLHWPYNQCSSCHPLNLVIWLGP*LCILTD
Trigger: ATCAGTAAGAATACAGAGCAACGGCCCCAGCCAGAT...GACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR-3UTR CAA 90 bp ACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTATGTCAGAAGGGTACTaGTACATGGACGACTCGGTC +
Preference number: 3 (lower is better)
Translates to: TSAQHLRICLSLEIPTTFMSEGY*YMDDSV
Trigger: GACCGAGTCGTCCATGTACAAGTACCCTTCTGACAT...AAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR TCA 72 bp ACCTTAAAAATCTGCATGAGCCATAAAGTCCTGGTCTaGGACCTGAAGGAAGCAGGGCGCTTATTCTTTGCT +
Preference number: 3 (lower is better)
Translates to: TLKICMSHKVLV*DLKEAGRLFFA
Trigger: AGCAAAGAATAAGCGCCCTGCTTCCTTCAGGTCTCAGACCAGGACTTTATGGCTCATGCAGATTTTTAAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
3UTR-3UTR CAA 90 bp AAGTGTGCAGGATGGGCTTCAGCTAGAAGGCCACTGATGAGTAAGCTTCTAGTATGCCATCCACTGAATTaGGTCCTCCTAAAATTAGAT +
Preference number: 3 (lower is better)
Translates to: KCAGWASARRPLMSKLLVCHPLN*VLLKLD
Trigger: ATCTAATTTTAGGAGGACCAAATTCAGTGGATGGCA...TACTAGAAGCTTACTCATCAGTGGCCTTCTAGCTGAAGCCCATCCTGCACACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR-3UTR CAA 90 bp ATATGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTTGCCATCCACTGAATTaGGTCCTCCTAAAATTAGAT +
Preference number: 3 (lower is better)
Translates to: ICPVESKASSKCAGWASACHPLN*VLLKLD
Trigger: ATCTAATTTTAGGAGGACCAAATTCAGTGGATGGCA...AGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CAA 90 bp CTGACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTCACTTGCGAATCTGCTaGAGTTTAGAAATCCCTACA +
Preference number: 3 (lower is better)
Translates to: LTSAQHLRICLSLEIPTTHLRIC*SLEIPT
Trigger: TGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG...AGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CAA 90 bp AAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCACAAGCGCACAGCACTaGCGAATCTGCTTGAGTTTA +
Preference number: 3 (lower is better)
Translates to: KLHWPYNQCSSCHPLNLVTSAQH*RICLSL
Trigger: TAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGT...GACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CAA 90 bp ATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTCATAAAATGACTCTCCTCTCGTaGGTGGTCATGTTGGGAGGA +
Preference number: 3 (lower is better)
Translates to: ILCHTEPRVLTRNCFGHKMTLLS*VVMLGG
Trigger: TCCTCCCAACATGACCACCAACGAGAGGAGAGTCAT...TTTATGACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429175.7
3UTR GCA 72 bp TCTGATGGTCTGACAAGCGCACAGCACTTGCGAATCTaGTTGAGTTTAGAAATCCCTACAACTTTTCCAAGT +
Preference number: 3 (lower is better)
Translates to: SDGLTSAQHLRI*LSLEIPTTFPS
Trigger: ACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAGACCATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CAA 90 bp CACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACTGAACCCCGTGTATaGACAAGAAACTGCTTTGGT +
Preference number: 3 (lower is better)
Translates to: HTNLLSIKFQLGENFTGLTEPRV*TRNCFG
Trigger: ACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGT...AAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CAA 90 bp CACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGACTGAACCCCGTGTATaGACAAGAAACTGCTTTGGT +
Preference number: 3 (lower is better)
Translates to: HLRICLSLEIPTTFPSSGTEPRV*TRNCFG
Trigger: ACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGT...CCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CAA 90 bp GACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTGCTTCCCACCTCTATTaGTCACTAAATCTCAAACCA +
Preference number: 3 (lower is better)
Translates to: DKRTALANLLEFRNPYNFASHLY*SLNLKP
Trigger: TGGTTTGAGATTTAGTGACAAATAGAGGTGGGAAGC...AAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CAA 90 bp CTGACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTAATTTATACAGTAAGTaGCCTTCTGATTGGTTGGCC +
Preference number: 3 (lower is better)
Translates to: LTSAQHLRICLSLEIPTTNLYSK*PSDWLA
Trigger: GGCCAACCAATCAGAAGGCAACTTACTGTATAAATT...AGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CAA 90 bp AAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAACTGTACCAGTGCTTaGCTTTCTCATAAGTCAGTG +
Preference number: 3 (lower is better)
Translates to: KRTALANLLEFRNPYNFSNCTSA*LSHKSV
Trigger: CACTGACTTATGAGAAAGCAAAGCACTGGTACAGTT...GGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CAA 90 bp ACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTAGGGGAGGACTTTTGTaGAGGCCAGAATTCATGTTA +
Preference number: 3 (lower is better)
Translates to: TSAQHLRICLSLEIPTTFRGGLL*RPEFML
Trigger: TAACATGAATTCTGGCCTCAACAAAAGTCCTCCCCT...AAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
3UTR-3UTR CAA 90 bp ACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCTTTGTTCAGCCACATATGTCCTGTaGAGTCCAAAGCATCCAGTA +
Preference number: 3 (lower is better)
Translates to: TENSNWHTGPWNYSSLCSATYVL*SPKHPV
Trigger: TACTGGATGCTTTGGACTCAACAGGACATATGTGGC...TGAACAAAGAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CAA 90 bp ATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTCATAAAGCCACATATGTCCTGTaGAGTCCAAAGCATCCAGTA +
Preference number: 3 (lower is better)
Translates to: ILCHTEPRVLTRNCFGHKATYVL*SPKHPV
Trigger: TACTGGATGCTTTGGACTCAACAGGACATATGTGGC...TTTATGACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CAA 90 bp TGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTAAAAGCTTCCCACCTCTATTaGTCACTAAATCTCAAACCA +
Preference number: 3 (lower is better)
Translates to: WPYNQCSSCHPLNLVLLKASHLY*SLNLKP
Trigger: TGGTTTGAGATTTAGTGACAAATAGAGGTGGGAAGC...TTTTAGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CAA 90 bp CACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTGCTTCCCACCTCTATTaGTCACTAAATCTCAAACCA +
Preference number: 3 (lower is better)
Translates to: HTNLLSIKFQLGENFTGLASHLY*SLNLKP
Trigger: TGGTTTGAGATTTAGTGACAAATAGAGGTGGGAAGC...AAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CAA 90 bp CACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGCAATCAATGTTCCAGTaGCCATCCACTGAATTTGGT +
Preference number: 3 (lower is better)
Translates to: HLRICLSLEIPTTFPSSGQSMFQ*PSTEFG
Trigger: ACCAAATTCAGTGGATGGCAACTGGAACATTGATTG...CCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CAA 90 bp CACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGCACTTGCGAATCTGCTaGAGTTTAGAAATCCCTACA +
Preference number: 3 (lower is better)
Translates to: HLRICLSLEIPTTFPSSGHLRIC*SLEIPT
Trigger: TGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG...CCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CAA 90 bp ACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTTGCCATCCACTGAATTaGGTCCTCCTAAAATTAGAT +
Preference number: 3 (lower is better)
Translates to: TSAQHLRICLSLEIPTTFCHPLN*VLLKLD
Trigger: ATCTAATTTTAGGAGGACCAAATTCAGTGGATGGCA...AAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CAA 90 bp CTTGGCGTCTTAAACACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAACAATCAATGTTCCAGTaGCCATCCACTGAATTTGGT +
Preference number: 3 (lower is better)
Translates to: LGVLNTQTFFPSNSSWVKQSMFQ*PSTEFG
Trigger: ACCAAATTCAGTGGATGGCAACTGGAACATTGATTG...TTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTGTTTAAGACGCCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CAA 90 bp GTCCTTACATACAGGTTTATCCATGGCCTTAGCTGCTGTTTTATAAAACCCTTTTCCATCAAATTCCAGTaGGGTGAAAACTTCACTGGC +
Preference number: 3 (lower is better)
Translates to: VLTYRFIHGLSCCFIKPFSIKFQ*GENFTG
Trigger: GCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA...AAAGGGTTTTATAAAACAGCAGCTAAGGCCATGGATAAACCTGTATGTAAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
3UTR-3UTR CAA 90 bp AAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCAATTTATACAGTAAGTaGCCTTCTGATTGGTTGGCC +
Preference number: 3 (lower is better)
Translates to: KLHWPYNQCSSCHPLNLVNLYSK*PSDWLA
Trigger: GGCCAACCAATCAGAAGGCAACTTACTGTATAAATT...GACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CAA 90 bp CTTCTGCTGTACTGCAGTAGGTACATTCGAAAAATTCTTGATAGTGCAAGAAGTGCTTCCCACCTCTATTaGTCACTAAATCTCAAACCA +
Preference number: 3 (lower is better)
Translates to: LLLYCSRYIRKILDSARSASHLY*SLNLKP
Trigger: TGGTTTGAGATTTAGTGACAAATAGAGGTGGGAAGC...ACTTCTTGCACTATCAAGAATTTTTCGAATGTACCTACTGCAGTACAGCAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
3UTR-3UTR CAA 90 bp CTTGGCGTCTTAAACACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAATGCCATCCACTGAATTaGGTCCTCCTAAAATTAGAT +
Preference number: 3 (lower is better)
Translates to: LGVLNTQTFFPSNSSWVKCHPLN*VLLKLD
Trigger: ATCTAATTTTAGGAGGACCAAATTCAGTGGATGGCA...TTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTGTTTAAGACGCCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CAA 90 bp AAACTGGAGACAAATGTTCCGAAACACATCCCATTTCATTTAGGTAGACATGTTTCCATCAAATTCCAGTaGGGTGAAAACTTCACTGGC +
Preference number: 3 (lower is better)
Translates to: KLETNVPKHIPFHLGRHVSIKFQ*GENFTG
Trigger: GCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA...AACATGTCTACCTAAATGAAATGGGATGTGTTTCGGAACATTTGTCTCCAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
3UTR-3UTR CAA 90 bp GTCCTTACATACAGGTTTATCCATGGCCTTAGCTGCTGTTTTATAAAACCCTTTCACTTGCGAATCTGCTaGAGTTTAGAAATCCCTACA +
Preference number: 3 (lower is better)
Translates to: VLTYRFIHGLSCCFIKPFHLRIC*SLEIPT
Trigger: TGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG...AAAGGGTTTTATAAAACAGCAGCTAAGGCCATGGATAAACCTGTATGTAAGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
3UTR-3UTR CAA 90 bp ATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTCATAAACACTTGCGAATCTGCTaGAGTTTAGAAATCCCTACA +
Preference number: 3 (lower is better)
Translates to: ILCHTEPRVLTRNCFGHKHLRIC*SLEIPT
Trigger: TGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG...TTTATGACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR TCA 72 bp CCACCTCTATTTGTCACTAAATCTCAAACCAGAACATaGCGGGTTAAGTCCATGATTCTGTGTCATACTGAA +
Preference number: 3 (lower is better)
Translates to: PPLFVTKSQTRT*RVKSMILCHTE
Trigger: TTCAGTATGACACAGAATCATGGACTTAACCCGTCATGTTCTGGTTTGAGATTTAGTGACAAATAGAGGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CAA 90 bp TGTTACACGCATTTCCAAAGCATTAAAGATCTAAATGGATTATCTTTTCCCTGCTCCATCAAATTCCAGTaGGGTGAAAACTTCACTGGC +
Preference number: 3 (lower is better)
Translates to: CYTHFQSIKDLNGLSFPCSIKFQ*GENFTG
Trigger: GCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA...GCAGGGAAAAGATAATCCATTTAGATCTTTAATGCTTTGGAAATGCGTGTAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CAA 90 bp GTCCTTACATACAGGTTTATCCATGGCCTTAGCTGCTGTTTTATAAAACCCTTTACAACATGGTCTTCTTaGACAGTTGTCAGCTTAACA +
Preference number: 3 (lower is better)
Translates to: VLTYRFIHGLSCCFIKPFTTWSS*TVVSLT
Trigger: TGTTAAGCTGACAACTGTCAAAGAAGACCATGTTGT...AAAGGGTTTTATAAAACAGCAGCTAAGGCCATGGATAAACCTGTATGTAAGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
3UTR-3UTR CAA 90 bp TGTTACACGCATTTCCAAAGCATTAAAGATCTAAATGGATTATCTTTTCCCTGCCAATCAATGTTCCAGTaGCCATCCACTGAATTTGGT +
Preference number: 3 (lower is better)
Translates to: CYTHFQSIKDLNGLSFPCQSMFQ*PSTEFG
Trigger: ACCAAATTCAGTGGATGGCAACTGGAACATTGATTG...GCAGGGAAAAGATAATCCATTTAGATCTTTAATGCTTTGGAAATGCGTGTAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR GCA 72 bp CAGAACCATGACTTAACCATTCCAGTAATCTTAATATaGAACTCACAAGATGCTAGGAGACTGAGAATTCAA +
Preference number: 3 (lower is better)
Translates to: QNHDLTIPVILI*NSQDARRLRIQ
Trigger: TTGAATTCTCAGTCTCCTAGCATCTTGTGAGTTGCATATTAAGATTACTGGAATGGTTAAGTCATGGTTCTG
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR CCA 72 bp TTAAACACACAAACCTTCTTTCCATCAAATTCCAGTTaGGTGAAAACTTCACTGGCCTTACAATCAATGTTC +
Preference number: 3 (lower is better)
Translates to: LNTQTFFPSNSS*VKTSLALQSMF
Trigger: GAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTGTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR-3UTR CAA 90 bp TGTTACACGCATTTCCAAAGCATTAAAGATCTAAATGGATTATCTTTTCCCTGCAATTTATACAGTAAGTaGCCTTCTGATTGGTTGGCC +
Preference number: 3 (lower is better)
Translates to: CYTHFQSIKDLNGLSFPCNLYSK*PSDWLA
Trigger: GGCCAACCAATCAGAAGGCAACTTACTGTATAAATT...GCAGGGAAAAGATAATCCATTTAGATCTTTAATGCTTTGGAAATGCGTGTAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp GCCAGCGCAAGCCCTGCGTGCGGCCATGGGGCTCCACGGCTGCCGCTCAGGGTGCCCTGCGTGCGGCCATaGGGCTCCACGGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: ASASPACGHGAPRLPLRVPCVRP*GSTAAA
Trigger: AGCGGCAGCCGTGGAGCCCCATGGCCGCACGCAGGG...CACCCTGAGCGGCAGCCGTGGAGCCCCATGGCCGCACGCAGGGCTTGCGCTGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429175.7
CDS-3UTR CCA 90 bp GCCAGCGCAAGCCCTGCGTGCGGCCATGGGGCTCCACGGCTGCCGCTCAGGGTGGGCTGCCGCTCAGGGTaGGTACAGGTGAAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: ASASPACGHGAPRLPLRVGCRSG*VQVKPS
Trigger: GCTGGGCTTCACCTGTACCCACCCTGAGCGGCAGCC...CACCCTGAGCGGCAGCCGTGGAGCCCCATGGCCGCACGCAGGGCTTGCGCTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429175.7
CDS-3UTR CCA 90 bp GCCAGCGCAAGCCCTGCGTGCGGCCATGGGGCTCCACGGCTGCCGCTCAGGGTGCTCTCCTCTCGTTGGTaGTCATGTTGGGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: ASASPACGHGAPRLPLRVLSSRW*SCWEEG
Trigger: CCCCTCCTCCCAACATGACCACCAACGAGAGGAGAG...CACCCTGAGCGGCAGCCGTGGAGCCCCATGGCCGCACGCAGGGCTTGCGCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429175.7
CDS-3UTR TCA 90 bp CACAGCTGGATCTGCCCGCTTCCAGGGTTGGCTAGGCGACTGCTGGTCGGGCCCTGGTCCCCTCCCAGGTaGTACAGCTGGCGTTGGCGC +
Preference number: 4 (lower is better)
Translates to: HSWICPLPGLARRLLVGPWSPPR*YSWRWR
Trigger: GCGCCAACGCCAGCTGTATCACCTGGGAGGGGACCA...GGGCCCGACCAGCAGTCGCCTAGCCAACCCTGGAAGCGGGCAGATCCAGCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
CDS-3UTR TCA 90 bp TGGCTAGGCGACTGCTGGTCGGGCCCAGGATCTGATACGGATCTGGCTGGGGCCGGTCTGCGGGGACGATaGCTCTCCTCTCGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: WLGDCWSGPGSDTDLAGAGLRGR*LSSRWW
Trigger: CCACCAACGAGAGGAGAGTCATCGTCCCCGCAGACC...GGCCCCAGCCAGATCCGTATCAGATCCTGGGCCCGACCAGCAGTCGCCTAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429175.7
3UTR CAA 72 bp GGGTTGGACTCGCCTCCGCCCACCAGCTTGCTGCATTaGCTAACGCTGCAGTCCACCGGAGACTCCCTCGCC +
Preference number: 4 (lower is better)
Translates to: GLDSPPPTSLLH*LTLQSTGDSLA
Trigger: GGCGAGGGAGTCTCCGGTGGACTGCAGCGTTAGCAAATGCAGCAAGCTGGTGGGCGGAGGCGAGTCCAACCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429175.7
CDS-3UTR CCA 90 bp CACAGCTGGATCTGCCCGCTTCCAGGGTTGGCTAGGCGACTGCTGGTCGGGCCCAGCTGTACTCCTTTATaGCCCACTCCAGCCATTGCC +
Preference number: 4 (lower is better)
Translates to: HSWICPLPGLARRLLVGPSCTPL*PTPAIA
Trigger: GGCAATGGCTGGAGTGGGCCATAAAGGAGTACAGCT...GGGCCCGACCAGCAGTCGCCTAGCCAACCCTGGAAGCGGGCAGATCCAGCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429175.7
CDS-3UTR TCA 90 bp GGTCAGCTGAGTGCATACTGTCCACTGAGAGGGATTCTGCAATGCCCTTGGCGTGACCCGGTTACAGCCTaGCCTCGCAGCCCCTTCGGA +
Preference number: 4 (lower is better)
Translates to: GQLSAYCPLRGILQCPWRDPVTA*PRSPFG
Trigger: TCCGAAGGGGCTGCGAGGTCAGGCTGTAACCGGGTC...ACGCCAAGGGCATTGCAGAATCCCTCTCAGTGGACAGTATGCACTCAGCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp GGTCAGCTGAGTGCATACTGTCCACTGAGAGGGATTCTGCAATGCCCTTGGCGTGTGGTGGGAGGGGGTTaGTCTTGTGGGGCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: GQLSAYCPLRGILQCPWRVVGGG*SCGAAR
Trigger: ACGGGCAGCCCCACAAGATCAACCCCCTCCCACCAC...ACGCCAAGGGCATTGCAGAATCCCTCTCAGTGGACAGTATGCACTCAGCTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp TGTGATGCGGCTCCAAAGAAGCTGGAGGAAGTGACAGGCATGGAGGATGGATGGTCGGCCTTGGGGAGATaGGCTGCCGCTCCGTACGCT +
Preference number: 4 (lower is better)
Translates to: CDAAPKKLEEVTGMEDGWSALGR*AAAPYA
Trigger: AGCGTACGGAGCGGCAGCCCATCTCCCCAAGGCCGA...CCATCCATCCTCCATGCCTGTCACTTCCTCCAGCTTCTTTGGAGCCGCATCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
CDS-3UTR CCA 90 bp TGGCTAGGCGACTGCTGGTCGGGCCCAGGATCTGATACGGATCTGGCTGGGGCCAAGGGTACTTGTACATaGACGACTCGGTCGGATGTG +
Preference number: 4 (lower is better)
Translates to: WLGDCWSGPGSDTDLAGAKGTCT*TTRSDV
Trigger: CACATCCGACCGAGTCGTCCATGTACAAGTACCCTT...GGCCCCAGCCAGATCCGTATCAGATCCTGGGCCCGACCAGCAGTCGCCTAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
CDS-3UTR CCA 90 bp TGGCTAGGCGACTGCTGGTCGGGCCCAGGATCTGATACGGATCTGGCTGGGGCCCTGTCTGAAACATCGTaGGTAGCTAAGGGTCGGGAA +
Preference number: 4 (lower is better)
Translates to: WLGDCWSGPGSDTDLAGALSETS*VAKGRE
Trigger: TTCCCGACCCTTAGCTACCCACGATGTTTCAGACAG...GGCCCCAGCCAGATCCGTATCAGATCCTGGGCCCGACCAGCAGTCGCCTAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608303.5
CDS-3UTR TCA 90 bp ACAGTAAGTTGCCTTCTGATTGGTTGGCCCTGGTCTGATGGTCTGACAAGCGCAGTGGTGGGAGGGGGTTaGTCTTGTGGGGCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: TVSCLLIGWPWSDGLTSAVVGGG*SCGAAR
Trigger: ACGGGCAGCCCCACAAGATCAACCCCCTCCCACCAC...TGCGCTTGTCAGACCATCAGACCAGGGCCAACCAATCAGAAGGCAACTTACTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp CACAGCTGGATCTGCCCGCTTCCAGGGTTGGCTAGGCGACTGCTGGTCGGGCCCAAGATGCTAGGAGACTaGGAATTCAAACTGGCATAC +
Preference number: 4 (lower is better)
Translates to: HSWICPLPGLARRLLVGPKMLGD*EFKLAY
Trigger: GTATGCCAGTTTGAATTCTCAGTCTCCTAGCATCTT...GGGCCCGACCAGCAGTCGCCTAGCCAACCCTGGAAGCGGGCAGATCCAGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
CDS-3UTR GCA 90 bp ATATGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTAGCGCAAGCCCTGCGTaGGGCCATGGGGCTCCACGG +
Preference number: 4 (lower is better)
Translates to: ICPVESKASSKCAGWASASASPA*GHGAPR
Trigger: CCGTGGAGCCCCATGGCCGCACGCAGGGCTTGCGCT...AGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281428.12
ENST00000429175.7
CDS-3UTR GCA 90 bp GGTCAGCTGAGTGCATACTGTCCACTGAGAGGGATTCTGCAATGCCCTTGGCGTTGCCACAGCTGGATCTaGCCGCTTCCAGGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: GQLSAYCPLRGILQCPWRCHSWI*PLPGLA
Trigger: AGCCAACCCTGGAAGCGGGCAGATCCAGCTGTGGCA...ACGCCAAGGGCATTGCAGAATCCCTCTCAGTGGACAGTATGCACTCAGCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp CTGACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTCCCTGCGTGCGGCCATaGGGCTCCACGGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: LTSAQHLRICLSLEIPTTPCVRP*GSTAAA
Trigger: AGCGGCAGCCGTGGAGCCCCATGGCCGCACGCAGGG...AGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281428.12
ENST00000429175.7
CDS-3UTR CCA 90 bp GGTCAGCTGAGTGCATACTGTCCACTGAGAGGGATTCTGCAATGCCCTTGGCGTTGGCTAGGCGACTGCTaGTCGGGCCCAGGATCTGAT +
Preference number: 4 (lower is better)
Translates to: GQLSAYCPLRGILQCPWRWLGDC*SGPGSD
Trigger: ATCAGATCCTGGGCCCGACCAGCAGTCGCCTAGCCA...ACGCCAAGGGCATTGCAGAATCCCTCTCAGTGGACAGTATGCACTCAGCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp GGTCAGCTGAGTGCATACTGTCCACTGAGAGGGATTCTGCAATGCCCTTGGCGTCCCTCACTGGCTGATTaGTCCACTCCTGCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: GQLSAYCPLRGILQCPWRPSLAD*STPAVV
Trigger: CACCACAGCAGGAGTGGATCAATCAGCCAGTGAGGG...ACGCCAAGGGCATTGCAGAATCCCTCTCAGTGGACAGTATGCACTCAGCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp GGTCAGCTGAGTGCATACTGTCCACTGAGAGGGATTCTGCAATGCCCTTGGCGTCCGACAGAGCCTCCTTaGTGTAAGACGACGTGTCGG +
Preference number: 4 (lower is better)
Translates to: GQLSAYCPLRGILQCPWRPTEPP*CKTTCR
Trigger: CCGACACGTCGTCTTACATCAAGGAGGCTCTGTCGG...ACGCCAAGGGCATTGCAGAATCCCTCTCAGTGGACAGTATGCACTCAGCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344954.10
ENST00000608303.5
CDS-3UTR GCA 90 bp CTGACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTCCCTGCGTGCCCCCTaGGAGCGCCCTGCCCTCACT +
Preference number: 4 (lower is better)
Translates to: LTSAQHLRICLSLEIPTTSLRAP*ERPALT
Trigger: AGTGAGGGCAGGGCGCTCGCAGGGGGCACGCAGGGA...AGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR GCA 90 bp ACAGTAAGTTGCCTTCTGATTGGTTGGCCCTGGTCTGATGGTCTGACAAGCGCAGGTTGGCTAGGCGACTaGTGGTCGGGCCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: TVSCLLIGWPWSDGLTSAGWLGD*WSGPGS
Trigger: AGATCCTGGGCCCGACCAGCAGTCGCCTAGCCAACC...TGCGCTTGTCAGACCATCAGACCAGGGCCAACCAATCAGAAGGCAACTTACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp TGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTAGATCGGCCTTGGGGAGATaGGCTGCCGCTCCGTACGCT +
Preference number: 4 (lower is better)
Translates to: CPVESKASSKCAGWASARSALGR*AAAPYA
Trigger: AGCGTACGGAGCGGCAGCCCATCTCCCCAAGGCCGA...TCTAGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp GGTCAGCTGAGTGCATACTGTCCACTGAGAGGGATTCTGCAATGCCCTTGGCGTTGTAGTTCATGGGGTTaGACTCGCCTCCGCCCACCA +
Preference number: 4 (lower is better)
Translates to: GQLSAYCPLRGILQCPWRCSSWG*TRLRPP
Trigger: TGGTGGGCGGAGGCGAGTCCAACCCCATGAACTACA...ACGCCAAGGGCATTGCAGAATCCCTCTCAGTGGACAGTATGCACTCAGCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp GGTCAGCTGAGTGCATACTGTCCACTGAGAGGGATTCTGCAATGCCCTTGGCGTTGTTGTAGAGGGTGGTaGCGCGGAGGAAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GQLSAYCPLRGILQCPWRCCRGW*RGGSPP
Trigger: AGGAGGACTTCCTCCGCGCCACCACCCTCTACAACA...ACGCCAAGGGCATTGCAGAATCCCTCTCAGTGGACAGTATGCACTCAGCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp GCCATTCTTCTCGTCCATATAGCTGTTGTAGTTCATGGGGTTGGACTCGCCTCCTGCCGCTCCGTACGCTaGGTCAAAGAGGGACTGGTC +
Preference number: 4 (lower is better)
Translates to: AILLVHIAVVVHGVGLASCRSVR*VKEGLV
Trigger: GACCAGTCCCTCTTTGACTCAGCGTACGGAGCGGCA...GGAGGCGAGTCCAACCCCATGAACTACAACAGCTATATGGACGAGAAGAATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429175.7
CDS-3UTR TCA 90 bp ACAGTAAGTTGCCTTCTGATTGGTTGGCCCTGGTCTGATGGTCTGACAAGCGCATGCCGCTCCGTACGCTaGGTCAAAGAGGGACTGGTC +
Preference number: 4 (lower is better)
Translates to: TVSCLLIGWPWSDGLTSACRSVR*VKEGLV
Trigger: GACCAGTCCCTCTTTGACTCAGCGTACGGAGCGGCA...TGCGCTTGTCAGACCATCAGACCAGGGCCAACCAATCAGAAGGCAACTTACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp ATATGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTGTCGGGCCCAGGATCTaGTACGGATCTGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: ICPVESKASSKCAGWASAVGPRI*YGSGWG
Trigger: GCCCCAGCCAGATCCGTATCAGATCCTGGGCCCGAC...AGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp AGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTCCCCTGCGAGCGCCCTaGCCTCACTCCCCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: SWVKTSLALQSMFQLPSTPLRAP*PHSPVH
Trigger: GTGCACAGGGGAGTGAGGGCAGGGCGCTCGCAGGGG...AGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR GCA 90 bp ATCCAGTTTTGTCTTCCCTTCAAGGCCACATATGTCCTGTTGAGTCCAAAGCATAGCCAGCGCAAGCCCTaGGTGCGGCCATGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: IQFCLPFKATYVLLSPKHSQRKP*VRPWGS
Trigger: GGAGCCCCATGGCCGCACGCAGGGCTTGCGCTGGCT...ATGCTTTGGACTCAACAGGACATATGTGGCCTTGAAGGGAAGACAAAACTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281428.12
ENST00000429175.7
CDS-3UTR CCA 90 bp GGTCAGCTGAGTGCATACTGTCCACTGAGAGGGATTCTGCAATGCCCTTGGCGTGAGGCAGCTGGCGCCTaGATCCATTCATGTGGTCAT +
Preference number: 4 (lower is better)
Translates to: GQLSAYCPLRGILQCPWREAAGA*IHSCGH
Trigger: ATGACCACATGAATGGATCCAGGCGCCAGCTGCCTC...ACGCCAAGGGCATTGCAGAATCCCTCTCAGTGGACAGTATGCACTCAGCTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281428.12
ENST00000429175.7
CDS-3UTR CCA 90 bp ACAGTAAGTTGCCTTCTGATTGGTTGGCCCTGGTCTGATGGTCTGACAAGCGCACCGTGTTGTAGAGGGTaGTGGCGCGGAGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: TVSCLLIGWPWSDGLTSAPCCRG*WRGGSP
Trigger: AGGACTTCCTCCGCGCCACCACCCTCTACAACACGG...TGCGCTTGTCAGACCATCAGACCAGGGCCAACCAATCAGAAGGCAACTTACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp ACAGTAAGTTGCCTTCTGATTGGTTGGCCCTGGTCTGATGGTCTGACAAGCGCACGACTCGGTCGGATGTaGCTGCAGAGCCTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: TVSCLLIGWPWSDGLTSARLGRM*LQSLGN
Trigger: ATTGCCCAGGCTCTGCAGCCACATCCGACCGAGTCG...TGCGCTTGTCAGACCATCAGACCAGGGCCAACCAATCAGAAGGCAACTTACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp ACAGTAAGTTGCCTTCTGATTGGTTGGCCCTGGTCTGATGGTCTGACAAGCGCAACGTGGGTGTTAGGATaGCGGGGGACGTTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: TVSCLLIGWPWSDGLTSATWVLG*RGTLGL
Trigger: CAACCCCAACGTCCCCCGCCATCCTAACACCCACGT...TGCGCTTGTCAGACCATCAGACCAGGGCCAACCAATCAGAAGGCAACTTACTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp ACAGTAAGTTGCCTTCTGATTGGTTGGCCCTGGTCTGATGGTCTGACAAGCGCAGCGAGGGAGAGACGGTaGGATGGTGATGAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: TVSCLLIGWPWSDGLTSAARERR*DGDEVG
Trigger: CCCCACTTCATCACCATCCCACCGTCTCTCCCTCGC...TGCGCTTGTCAGACCATCAGACCAGGGCCAACCAATCAGAAGGCAACTTACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344954.10
ENST00000608303.5
CDS-3UTR TCA 90 bp TCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTGACCCGGTTACAGCCTaGCCTCGCAGCCCCTTCGGA +
Preference number: 4 (lower is better)
Translates to: SLALQSMFQLPSTEFGPPDPVTA*PRSPFG
Trigger: TCCGAAGGGGCTGCGAGGTCAGGCTGTAACCGGGTC...AGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp ACAGTAAGTTGCCTTCTGATTGGTTGGCCCTGGTCTGATGGTCTGACAAGCGCACCTGGTCTGATGGTCTaGCAAGCGCACAGCACTTGC +
Preference number: 4 (lower is better)
Translates to: TVSCLLIGWPWSDGLTSAPGLMV*QAHSTC
Trigger: GCAAGTGCTGTGCGCTTGTCAGACCATCAGACCAGG...TGCGCTTGTCAGACCATCAGACCAGGGCCAACCAATCAGAAGGCAACTTACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp CTGATACGGATCTGGCTGGGGCCGTTGCTCTGTATTCTTACTGATCGTTTGTGCTGGTTGGCCCTGGTCTaGTGGTCTGACAAGCGCACA +
Preference number: 4 (lower is better)
Translates to: LIRIWLGPLLCILTDRLCWLALV*WSDKRT
Trigger: TGTGCGCTTGTCAGACCATCAGACCAGGGCCAACCA...GCACAAACGATCAGTAAGAATACAGAGCAACGGCCCCAGCCAGATCCGTATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
CDS-3UTR GCA 90 bp TGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTAAAACCCCTGCGAGCGCCCTaGCCTCACTCCCCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: WPYNQCSSCHPLNLVLLKPLRAP*PHSPVH
Trigger: GTGCACAGGGGAGTGAGGGCAGGGCGCTCGCAGGGG...TTTTAGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR GCA 90 bp AAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCTCCCTGCGTGCCCCCTaGGAGCGCCCTGCCCTCACT +
Preference number: 4 (lower is better)
Translates to: KLHWPYNQCSSCHPLNLVSLRAP*ERPALT
Trigger: AGTGAGGGCAGGGCGCTCGCAGGGGGCACGCAGGGA...GACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR GCA 90 bp CTGACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTCCTCGCCCGCTCGCCTaGCAGTCCTCCCTCCATTCT +
Preference number: 4 (lower is better)
Translates to: LTSAQHLRICLSLEIPTTPRPLA*QSSLHS
Trigger: AGAATGGAGGGAGGACTGGCAGGCGAGCGGGCGAGG...AGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281428.12
ENST00000429175.7
CDS-3UTR GCA 90 bp GGTCAGCTGAGTGCATACTGTCCACTGAGAGGGATTCTGCAATGCCCTTGGCGTCTTACTGATCGTTTGTaGCCCTCCAAGGGGAGGACT +
Preference number: 4 (lower is better)
Translates to: GQLSAYCPLRGILQCPWRLTDRL*PSKGRT
Trigger: AGTCCTCCCCTTGGAGGGGCACAAACGATCAGTAAG...ACGCCAAGGGCATTGCAGAATCCCTCTCAGTGGACAGTATGCACTCAGCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp ATATGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTGGTTGGCTAGGCGACTaGTGGTCGGGCCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: ICPVESKASSKCAGWASAGWLGD*WSGPGS
Trigger: AGATCCTGGGCCCGACCAGCAGTCGCCTAGCCAACC...AGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp TGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTAGATGCCACAGCTGGATCTaGCCGCTTCCAGGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: CPVESKASSKCAGWASARCHSWI*PLPGLA
Trigger: AGCCAACCCTGGAAGCGGGCAGATCCAGCTGTGGCA...TCTAGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp ATATGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTTCGGTCGGATGTGGCTaGAGAGCCTGGGCAATGCCG +
Preference number: 4 (lower is better)
Translates to: ICPVESKASSKCAGWASASVGCG*RAWAMP
Trigger: CGGCATTGCCCAGGCTCTGCAGCCACATCCGACCGA...AGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp TGTGATGCGGCTCCAAAGAAGCTGGAGGAAGTGACAGGCATGGAGGATGGATGGGAGTGGTCAGCTGAGTaGATACTGTCCACTGAGAGG +
Preference number: 4 (lower is better)
Translates to: CDAAPKKLEEVTGMEDGWEWSAE*ILSTER
Trigger: CCTCTCAGTGGACAGTATGCACTCAGCTGACCACTC...CCATCCATCCTCCATGCCTGTCACTTCCTCCAGCTTCTTTGGAGCCGCATCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
CDS-3UTR CCA 90 bp ACAGTAAGTTGCCTTCTGATTGGTTGGCCCTGGTCTGATGGTCTGACAAGCGCATGTTGTAGAGGGTGGTaGCGCGGAGGAAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: TVSCLLIGWPWSDGLTSACCRGW*RGGSPP
Trigger: AGGAGGACTTCCTCCGCGCCACCACCCTCTACAACA...TGCGCTTGTCAGACCATCAGACCAGGGCCAACCAATCAGAAGGCAACTTACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp GGTCAGCTGAGTGCATACTGTCCACTGAGAGGGATTCTGCAATGCCCTTGGCGTCTGATTGGTTGGCCCTaGTCTGATGGTCTGACAAGC +
Preference number: 4 (lower is better)
Translates to: GQLSAYCPLRGILQCPWRLIGWP*SDGLTS
Trigger: GCTTGTCAGACCATCAGACCAGGGCCAACCAATCAG...ACGCCAAGGGCATTGCAGAATCCCTCTCAGTGGACAGTATGCACTCAGCTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp GGTCAGCTGAGTGCATACTGTCCACTGAGAGGGATTCTGCAATGCCCTTGGCGTTATTCTTTGCTGGAGTaGCAGAAGGTGGCCGTCTGG +
Preference number: 4 (lower is better)
Translates to: GQLSAYCPLRGILQCPWRYSLLE*QKVAVW
Trigger: CCAGACGGCCACCTTCTGCCACTCCAGCAAAGAATA...ACGCCAAGGGCATTGCAGAATCCCTCTCAGTGGACAGTATGCACTCAGCTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp GGTCAGCTGAGTGCATACTGTCCACTGAGAGGGATTCTGCAATGCCCTTGGCGTCCACCGGAGACTCCCTaGATCCATTCATGTGGTCAT +
Preference number: 4 (lower is better)
Translates to: GQLSAYCPLRGILQCPWRPPETP*IHSCGH
Trigger: ATGACCACATGAATGGATCCAGGGAGTCTCCGGTGG...ACGCCAAGGGCATTGCAGAATCCCTCTCAGTGGACAGTATGCACTCAGCTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp GACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTGACCCGGTTACAGCCTaGCCTCGCAGCCCCTTCGGA +
Preference number: 4 (lower is better)
Translates to: DKRTALANLLEFRNPYNFDPVTA*PRSPFG
Trigger: TCCGAAGGGGCTGCGAGGTCAGGCTGTAACCGGGTC...AAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp GGTCAGCTGAGTGCATACTGTCCACTGAGAGGGATTCTGCAATGCCCTTGGCGTGAGGTAACTGAGGTGTaGCAACAGCACTTCCGTGTT +
Preference number: 4 (lower is better)
Translates to: GQLSAYCPLRGILQCPWREVTEV*QQHFRV
Trigger: AACACGGAAGTGCTGTTGTCACACCTCAGTTACCTC...ACGCCAAGGGCATTGCAGAATCCCTCTCAGTGGACAGTATGCACTCAGCTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp AGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGTCGGGCCCAGGATCTaGTACGGATCTGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SWVKTSLALQSMFQLPSTVGPRI*YGSGWG
Trigger: GCCCCAGCCAGATCCGTATCAGATCCTGGGCCCGAC...AGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp ATCCAGTTTTGTCTTCCCTTCAAGGCCACATATGTCCTGTTGAGTCCAAAGCATTGGTCCCCTCCCAGGTaGTACAGCTGGCGTTGGCGC +
Preference number: 4 (lower is better)
Translates to: IQFCLPFKATYVLLSPKHWSPPR*YSWRWR
Trigger: GCGCCAACGCCAGCTGTATCACCTGGGAGGGGACCA...ATGCTTTGGACTCAACAGGACATATGTGGCCTTGAAGGGAAGACAAAACTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp GCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCTGGTCCCCTCCCAGGTaGTACAGCTGGCGTTGGCGC +
Preference number: 4 (lower is better)
Translates to: ARRLRIQTGILAHGIIHLWSPPR*YSWRWR
Trigger: GCGCCAACGCCAGCTGTATCACCTGGGAGGGGACCA...GAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp AAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCGTGGCCGTCTGGGTCTaGAGTGCCCAGGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: KLHWPYNQCSSCHPLNLVVAVWV*SAQGRL
Trigger: CAGCCTCCCCTGGGCACTTCAGACCCAGACGGCCAC...GACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR GCA 90 bp TCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAAGCGCAAGCCCTGCGTaGGGCCATGGGGCTCCACGG +
Preference number: 4 (lower is better)
Translates to: SIKFQLGENFTGLTINVPSASPA*GHGAPR
Trigger: CCGTGGAGCCCCATGGCCGCACGCAGGGCTTGCGCT...TGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281428.12
ENST00000429175.7
CDS-3UTR GCA 90 bp TGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTAGAGCCCACTCCAGCCATTaGCTCACATGCTCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: CPVESKASSKCAGWASARAHSSH*LTCSCV
Trigger: GACACAGGAGCATGTGAGGCAATGGCTGGAGTGGGC...TCTAGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR GCA 90 bp ATATGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTTGCCACAGCTGGATCTaGCCGCTTCCAGGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: ICPVESKASSKCAGWASACHSWI*PLPGLA
Trigger: AGCCAACCCTGGAAGCGGGCAGATCCAGCTGTGGCA...AGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp ATCCAGTTTTGTCTTCCCTTCAAGGCCACATATGTCCTGTTGAGTCCAAAGCATTCGGCCTTGGGGAGATaGGCTGCCGCTCCGTACGCT +
Preference number: 4 (lower is better)
Translates to: IQFCLPFKATYVLLSPKHSALGR*AAAPYA
Trigger: AGCGTACGGAGCGGCAGCCCATCTCCCCAAGGCCGA...ATGCTTTGGACTCAACAGGACATATGTGGCCTTGAAGGGAAGACAAAACTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp AAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCTCGGCCTTGGGGAGATaGGCTGCCGCTCCGTACGCT +
Preference number: 4 (lower is better)
Translates to: KRTALANLLEFRNPYNFSSALGR*AAAPYA
Trigger: AGCGTACGGAGCGGCAGCCCATCTCCCCAAGGCCGA...GGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp TGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTAGACCACTCCTGCTGTGGTaGGAGGGGGTTGATCTTGTG +
Preference number: 4 (lower is better)
Translates to: CPVESKASSKCAGWASARPLLLW*EGVDLV
Trigger: CACAAGATCAACCCCCTCCCACCACAGCAGGAGTGG...TCTAGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp ACAGTAAGTTGCCTTCTGATTGGTTGGCCCTGGTCTGATGGTCTGACAAGCGCAGATCCACTCCTGCTGTaGTGGGAGGGGGTTGATCTT +
Preference number: 4 (lower is better)
Translates to: TVSCLLIGWPWSDGLTSADPLLL*WEGVDL
Trigger: AAGATCAACCCCCTCCCACCACAGCAGGAGTGGATC...TGCGCTTGTCAGACCATCAGACCAGGGCCAACCAATCAGAAGGCAACTTACTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp TGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTAGACTCTCCTCTCGTTGGTaGTCATGTTGGGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: CPVESKASSKCAGWASARLSSRW*SCWEEG
Trigger: CCCCTCCTCCCAACATGACCACCAACGAGAGGAGAG...TCTAGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp ATATGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTTGGCTAGGCGACTGCTaGTCGGGCCCAGGATCTGAT +
Preference number: 4 (lower is better)
Translates to: ICPVESKASSKCAGWASAWLGDC*SGPGSD
Trigger: ATCAGATCCTGGGCCCGACCAGCAGTCGCCTAGCCA...AGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp GCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCGCCCGCTTCCAGGGTTaGCTAGGCGACTGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: ARRLRIQTGILAHGIIHLARFQG*LGDCWS
Trigger: CGACCAGCAGTCGCCTAGCCAACCCTGGAAGCGGGC...GAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp AAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCGCCCGCTTCCAGGGTTaGCTAGGCGACTGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: KRTALANLLEFRNPYNFSARFQG*LGDCWS
Trigger: CGACCAGCAGTCGCCTAGCCAACCCTGGAAGCGGGC...GGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp ATATGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTCGACTCGGTCGGATGTaGCTGCAGAGCCTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: ICPVESKASSKCAGWASARLGRM*LQSLGN
Trigger: ATTGCCCAGGCTCTGCAGCCACATCCGACCGAGTCG...AGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp ACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTGTGGTGGGAGGGGGTTaGTCTTGTGGGGCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: TSAQHLRICLSLEIPTTFVVGGG*SCGAAR
Trigger: ACGGGCAGCCCCACAAGATCAACCCCCTCCCACCAC...AAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp ATCCAGTTTTGTCTTCCCTTCAAGGCCACATATGTCCTGTTGAGTCCAAAGCATGGTCTGCGGGGACGATaGCTCTCCTCTCGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: IQFCLPFKATYVLLSPKHGLRGR*LSSRWW
Trigger: CCACCAACGAGAGGAGAGTCATCGTCCCCGCAGACC...ATGCTTTGGACTCAACAGGACATATGTGGCCTTGAAGGGAAGACAAAACTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp GCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCGGTCTGCGGGGACGATaGCTCTCCTCTCGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: ARRLRIQTGILAHGIIHLGLRGR*LSSRWW
Trigger: CCACCAACGAGAGGAGAGTCATCGTCCCCGCAGACC...GAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp AAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCGTCGGGCCCAGGATCTaGTACGGATCTGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: KLHWPYNQCSSCHPLNLVVGPRI*YGSGWG
Trigger: GCCCCAGCCAGATCCGTATCAGATCCTGGGCCCGAC...GACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp GATGCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATGTCGGGCCCAGGATCTaGTACGGATCTGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: DARRLRIQTGILAHGIIHVGPRI*YGSGWG
Trigger: GCCCCAGCCAGATCCGTATCAGATCCTGGGCCCGAC...ATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp GATGCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATTGGTCCCCTCCCAGGTaGTACAGCTGGCGTTGGCGC +
Preference number: 4 (lower is better)
Translates to: DARRLRIQTGILAHGIIHWSPPR*YSWRWR
Trigger: GCGCCAACGCCAGCTGTATCACCTGGGAGGGGACCA...ATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp AAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCTGGTCCCCTCCCAGGTaGTACAGCTGGCGTTGGCGC +
Preference number: 4 (lower is better)
Translates to: KLHWPYNQCSSCHPLNLVWSPPR*YSWRWR
Trigger: GCGCCAACGCCAGCTGTATCACCTGGGAGGGGACCA...GACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp GGTCAGCTGAGTGCATACTGTCCACTGAGAGGGATTCTGCAATGCCCTTGGCGTCTGAACCCCGTGTATTaGCAAGAAACTGCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: GQLSAYCPLRGILQCPWRLNPVY*QETALV
Trigger: GACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAG...ACGCCAAGGGCATTGCAGAATCCCTCTCAGTGGACAGTATGCACTCAGCTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp CTGATACGGATCTGGCTGGGGCCGTTGCTCTGTATTCTTACTGATCGTTTGTGCGTGCATACTGTCCACTaGGAGGGATTCTGCAATGCC +
Preference number: 4 (lower is better)
Translates to: LIRIWLGPLLCILTDRLCVHTVH*EGFCNA
Trigger: GGCATTGCAGAATCCCTCTCAGTGGACAGTATGCAC...GCACAAACGATCAGTAAGAATACAGAGCAACGGCCCCAGCCAGATCCGTATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
CDS-3UTR TCA 90 bp ATATGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTTGGTTGGCCCTGGTCTaGTGGTCTGACAAGCGCACA +
Preference number: 4 (lower is better)
Translates to: ICPVESKASSKCAGWASAWLALV*WSDKRT
Trigger: TGTGCGCTTGTCAGACCATCAGACCAGGGCCAACCA...AGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp CTTGGCGTCTTAAACACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAGTGGCCGTCTGGGTCTaGAGTGCCCAGGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LGVLNTQTFFPSNSSWVKVAVWV*SAQGRL
Trigger: CAGCCTCCCCTGGGCACTTCAGACCCAGACGGCCAC...TTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTGTTTAAGACGCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR GCA 90 bp GTCCTTACATACAGGTTTATCCATGGCCTTAGCTGCTGTTTTATAAAACCCTTTTCCCTGCGTGCCCCCTaGGAGCGCCCTGCCCTCACT +
Preference number: 4 (lower is better)
Translates to: VLTYRFIHGLSCCFIKPFSLRAP*ERPALT
Trigger: AGTGAGGGCAGGGCGCTCGCAGGGGGCACGCAGGGA...AAAGGGTTTTATAAAACAGCAGCTAAGGCCATGGATAAACCTGTATGTAAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000281428.12
ENST00000527786.7
ENST00000534087.3
CDS-3UTR GCA 90 bp ATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTCATAAAAGCCAGCGCAAGCCCTaGGTGCGGCCATGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: ILCHTEPRVLTRNCFGHKSQRKP*VRPWGS
Trigger: GGAGCCCCATGGCCGCACGCAGGGCTTGCGCTGGCT...TTTATGACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281428.12
ENST00000429175.7
CDS-3UTR GCA 90 bp ACAGTAAGTTGCCTTCTGATTGGTTGGCCCTGGTCTGATGGTCTGACAAGCGCACTTACTGATCGTTTGTaGCCCTCCAAGGGGAGGACT +
Preference number: 4 (lower is better)
Translates to: TVSCLLIGWPWSDGLTSALTDRL*PSKGRT
Trigger: AGTCCTCCCCTTGGAGGGGCACAAACGATCAGTAAG...TGCGCTTGTCAGACCATCAGACCAGGGCCAACCAATCAGAAGGCAACTTACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp AAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCGGTTGGCTAGGCGACTaGTGGTCGGGCCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: KRTALANLLEFRNPYNFSGWLGD*WSGPGS
Trigger: AGATCCTGGGCCCGACCAGCAGTCGCCTAGCCAACC...GGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp GCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCGGTTGGCTAGGCGACTaGTGGTCGGGCCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: ARRLRIQTGILAHGIIHLGWLGD*WSGPGS
Trigger: AGATCCTGGGCCCGACCAGCAGTCGCCTAGCCAACC...GAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp GATGCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATTCGGCCTTGGGGAGATaGGCTGCCGCTCCGTACGCT +
Preference number: 4 (lower is better)
Translates to: DARRLRIQTGILAHGIIHSALGR*AAAPYA
Trigger: AGCGTACGGAGCGGCAGCCCATCTCCCCAAGGCCGA...ATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp CACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTGGCTGCCGCTCAGGGTaGGTACAGGTGAAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: HTNLLSIKFQLGENFTGLGCRSG*VQVKPS
Trigger: GCTGGGCTTCACCTGTACCCACCCTGAGCGGCAGCC...AAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281428.12
ENST00000429175.7
CDS-3UTR CCA 90 bp ACAGTAAGTTGCCTTCTGATTGGTTGGCCCTGGTCTGATGGTCTGACAAGCGCAAGCTGTACTCCTTTATaGCCCACTCCAGCCATTGCC +
Preference number: 4 (lower is better)
Translates to: TVSCLLIGWPWSDGLTSASCTPL*PTPAIA
Trigger: GGCAATGGCTGGAGTGGGCCATAAAGGAGTACAGCT...TGCGCTTGTCAGACCATCAGACCAGGGCCAACCAATCAGAAGGCAACTTACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp AAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCGCCCGCTTCCAGGGTTaGCTAGGCGACTGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: KLHWPYNQCSSCHPLNLVARFQG*LGDCWS
Trigger: CGACCAGCAGTCGCCTAGCCAACCCTGGAAGCGGGC...GACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp TCCATGATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTGCCCGCTTCCAGGGTTaGCTAGGCGACTGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: SMILCHTEPRVLTRNCFGARFQG*LGDCWS
Trigger: CGACCAGCAGTCGCCTAGCCAACCCTGGAAGCGGGC...ACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAATCATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp CACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGGCCCGCTTCCAGGGTTaGCTAGGCGACTGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: HLRICLSLEIPTTFPSSGARFQG*LGDCWS
Trigger: CGACCAGCAGTCGCCTAGCCAACCCTGGAAGCGGGC...CCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp GACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTGATGGCGGGGGACGTTaGGGTTGGGGTAGATTCCCC +
Preference number: 4 (lower is better)
Translates to: DKRTALANLLEFRNPYNFDGGGR*GWGRFP
Trigger: GGGGAATCTACCCCAACCCCAACGTCCCCCGCCATC...AAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp AGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGATGGCGGGGGACGTTaGGGTTGGGGTAGATTCCCC +
Preference number: 4 (lower is better)
Translates to: SWVKTSLALQSMFQLPSTDGGGR*GWGRFP
Trigger: GGGGAATCTACCCCAACCCCAACGTCCCCCGCCATC...AGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp CTGACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTACGTGGGTGTTAGGATaGCGGGGGACGTTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: LTSAQHLRICLSLEIPTTTWVLG*RGTLGL
Trigger: CAACCCCAACGTCCCCCGCCATCCTAACACCCACGT...AGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp TCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTACGTGGGTGTTAGGATaGCGGGGGACGTTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: SLALQSMFQLPSTEFGPPTWVLG*RGTLGL
Trigger: CAACCCCAACGTCCCCCGCCATCCTAACACCCACGT...AGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp ACAGTAAGTTGCCTTCTGATTGGTTGGCCCTGGTCTGATGGTCTGACAAGCGCACTGATTGGTTGGCCCTaGTCTGATGGTCTGACAAGC +
Preference number: 4 (lower is better)
Translates to: TVSCLLIGWPWSDGLTSALIGWP*SDGLTS
Trigger: GCTTGTCAGACCATCAGACCAGGGCCAACCAATCAG...TGCGCTTGTCAGACCATCAGACCAGGGCCAACCAATCAGAAGGCAACTTACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp CTGATACGGATCTGGCTGGGGCCGTTGCTCTGTATTCTTACTGATCGTTTGTGCCTGATTGGTTGGCCCTaGTCTGATGGTCTGACAAGC +
Preference number: 4 (lower is better)
Translates to: LIRIWLGPLLCILTDRLCLIGWP*SDGLTS
Trigger: GCTTGTCAGACCATCAGACCAGGGCCAACCAATCAG...GCACAAACGATCAGTAAGAATACAGAGCAACGGCCCCAGCCAGATCCGTATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
CDS-3UTR CCA 90 bp TGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTAGAGCGCTTATTCTTTGCTaGAGTGGCAGAAGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: CPVESKASSKCAGWASARALILC*SGRRWP
Trigger: CGGCCACCTTCTGCCACTCCAGCAAAGAATAAGCGC...TCTAGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp TCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAGACCCGGTTACAGCCTaGCCTCGCAGCCCCTTCGGA +
Preference number: 4 (lower is better)
Translates to: SIKFQLGENFTGLTINVPDPVTA*PRSPFG
Trigger: TCCGAAGGGGCTGCGAGGTCAGGCTGTAACCGGGTC...TGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp AAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCTGCCGCTCCGTACGCTaGGTCAAAGAGGGACTGGTC +
Preference number: 4 (lower is better)
Translates to: KRTALANLLEFRNPYNFSCRSVR*VKEGLV
Trigger: GACCAGTCCCTCTTTGACTCAGCGTACGGAGCGGCA...GGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp CTTGGCGTCTTAAACACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAGTGGTGGGAGGGGGTTaGTCTTGTGGGGCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: LGVLNTQTFFPSNSSWVKVVGGG*SCGAAR
Trigger: ACGGGCAGCCCCACAAGATCAACCCCCTCCCACCAC...TTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTGTTTAAGACGCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp CTGACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTCCCTCACTGGCTGATTaGTCCACTCCTGCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: LTSAQHLRICLSLEIPTTPSLAD*STPAVV
Trigger: CACCACAGCAGGAGTGGATCAATCAGCCAGTGAGGG...AGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp TGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTAGATTGACCCTCACTGGCTaGTTGATCCACTCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: CPVESKASSKCAGWASARLTLTG*LIHSCC
Trigger: ACAGCAGGAGTGGATCAATCAGCCAGTGAGGGTCAA...TCTAGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp ACAGTAAGTTGCCTTCTGATTGGTTGGCCCTGGTCTGATGGTCTGACAAGCGCATTTGACACTCAATCGTaGGGATTGGTCGGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: TVSCLLIGWPWSDGLTSAFDTQS*GLVGVG
Trigger: TCCCACACCGACCAATCCTCACGATTGAGTGTCAAA...TGCGCTTGTCAGACCATCAGACCAGGGCCAACCAATCAGAAGGCAACTTACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp GTCCATATAGCTGTTGTAGTTCATGGGGTTGGACTCGCCTCCGCCCACCAGCTTCAAATTCCAGTTGGGTaGAAACTTCACTGGCCTTAC +
Preference number: 4 (lower is better)
Translates to: VHIAVVVHGVGLASAHQLQIPVG*KLHWPY
Trigger: GTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTG...AAGCTGGTGGGCGGAGGCGAGTCCAACCCCATGAACTACAACAGCTATATGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429175.7
CDS-3UTR TCA 90 bp GGTCAGCTGAGTGCATACTGTCCACTGAGAGGGATTCTGCAATGCCCTTGGCGTCAAATTCCAGTTGGGTaGAAACTTCACTGGCCTTAC +
Preference number: 4 (lower is better)
Translates to: GQLSAYCPLRGILQCPWRQIPVG*KLHWPY
Trigger: GTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTG...ACGCCAAGGGCATTGCAGAATCCCTCTCAGTGGACAGTATGCACTCAGCTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp TGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTAGACATAAAGTCCTGGTCTaGGACCTGAAGGAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: CPVESKASSKCAGWASARHKVLV*DLKEAG
Trigger: CCCTGCTTCCTTCAGGTCTCAGACCAGGACTTTATG...TCTAGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR GCA 90 bp GATGCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATAGCTCCCAAGCACCGTaGCTCCTCCAGCCAGCGCAA +
Preference number: 4 (lower is better)
Translates to: DARRLRIQTGILAHGIIHSSQAP*LLQPAQ
Trigger: TTGCGCTGGCTGGAGGAGGCACGGTGCTTGGGAGCT...ATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281428.12
ENST00000429175.7
CDS-3UTR GCA 90 bp TCCATGATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTAGCTCCCAAGCACCGTaGCTCCTCCAGCCAGCGCAA +
Preference number: 4 (lower is better)
Translates to: SMILCHTEPRVLTRNCFGSSQAP*LLQPAQ
Trigger: TTGCGCTGGCTGGAGGAGGCACGGTGCTTGGGAGCT...ACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAATCATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281428.12
ENST00000429175.7
CDS-3UTR GCA 90 bp CTTGGCGTCTTAAACACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAACCTCGCCCGCTCGCCTaGCAGTCCTCCCTCCATTCT +
Preference number: 4 (lower is better)
Translates to: LGVLNTQTFFPSNSSWVKPRPLA*QSSLHS
Trigger: AGAATGGAGGGAGGACTGGCAGGCGAGCGGGCGAGG...TTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTGTTTAAGACGCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281428.12
ENST00000429175.7
CDS-3UTR GCA 90 bp ACAGTAAGTTGCCTTCTGATTGGTTGGCCCTGGTCTGATGGTCTGACAAGCGCATCTGGCTGGGGCCGTTaGTCTGTATTCTTACTGATC +
Preference number: 4 (lower is better)
Translates to: TVSCLLIGWPWSDGLTSASGWGR*SVFLLI
Trigger: GATCAGTAAGAATACAGAGCAACGGCCCCAGCCAGA...TGCGCTTGTCAGACCATCAGACCAGGGCCAACCAATCAGAAGGCAACTTACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp AAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCTGCCACAGCTGGATCTaGCCGCTTCCAGGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: KRTALANLLEFRNPYNFSCHSWI*PLPGLA
Trigger: AGCCAACCCTGGAAGCGGGCAGATCCAGCTGTGGCA...GGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp CACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTTCGGTCGGATGTGGCTaGAGAGCCTGGGCAATGCCG +
Preference number: 4 (lower is better)
Translates to: HTNLLSIKFQLGENFTGLSVGCG*RAWAMP
Trigger: CGGCATTGCCCAGGCTCTGCAGCCACATCCGACCGA...AAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp TCCATGATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTTCGGTCGGATGTGGCTaGAGAGCCTGGGCAATGCCG +
Preference number: 4 (lower is better)
Translates to: SMILCHTEPRVLTRNCFGSVGCG*RAWAMP
Trigger: CGGCATTGCCCAGGCTCTGCAGCCACATCCGACCGA...ACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAATCATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp TTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGACCTCGGTCGGATGTGGCTaGAGAGCCTGGGCAATGCCG +
Preference number: 4 (lower is better)
Translates to: LRICLSLEIPTTFPSSGTSVGCG*RAWAMP
Trigger: CGGCATTGCCCAGGCTCTGCAGCCACATCCGACCGA...GGTCCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp TGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTAGAGAGTGGTCAGCTGAGTaGATACTGTCCACTGAGAGG +
Preference number: 4 (lower is better)
Translates to: CPVESKASSKCAGWASAREWSAE*ILSTER
Trigger: CCTCTCAGTGGACAGTATGCACTCAGCTGACCACTC...TCTAGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp TCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCATCGGCCTTGGGGAGATaGGCTGCCGCTCCGTACGCT +
Preference number: 4 (lower is better)
Translates to: SIKFQLGENFTGLTINVPSALGR*AAAPYA
Trigger: AGCGTACGGAGCGGCAGCCCATCTCCCCAAGGCCGA...TGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp CACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGCAGTCATGTCGGCCTTaGGGAGATGGGCTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: HLRICLSLEIPTTFPSSGQSCRP*GDGLPL
Trigger: GAGCGGCAGCCCATCTCCCCAAGGCCGACATGACTG...CCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp TCCATGATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTCAGTCATGTCGGCCTTaGGGAGATGGGCTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: SMILCHTEPRVLTRNCFGQSCRP*GDGLPL
Trigger: GAGCGGCAGCCCATCTCCCCAAGGCCGACATGACTG...ACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAATCATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp CACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTCAGTCATGTCGGCCTTaGGGAGATGGGCTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: HTNLLSIKFQLGENFTGLQSCRP*GDGLPL
Trigger: GAGCGGCAGCCCATCTCCCCAAGGCCGACATGACTG...AAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp ATATGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTAGCTGTTGTAGTTCATaGGGTTGGACTCGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: ICPVESKASSKCAGWASASCCSS*GWTRLR
Trigger: GCGGAGGCGAGTCCAACCCCATGAACTACAACAGCT...AGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp TCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTAGGAATTGCCACAGCTaGATCTGCCCGCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SLALQSMFQLPSTEFGPPRNCHS*ICPLPG
Trigger: CCCTGGAAGCGGGCAGATCCAGCTGTGGCAATTCCT...AGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp ATCCAGTTTTGTCTTCCCTTCAAGGCCACATATGTCCTGTTGAGTCCAAAGCATCGACTCGGTCGGATGTaGCTGCAGAGCCTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: IQFCLPFKATYVLLSPKHRLGRM*LQSLGN
Trigger: ATTGCCCAGGCTCTGCAGCCACATCCGACCGAGTCG...ATGCTTTGGACTCAACAGGACATATGTGGCCTTGAAGGGAAGACAAAACTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp TTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGACCGATGGCGGGGGACGTTaGGGTTGGGGTAGATTCCCC +
Preference number: 4 (lower is better)
Translates to: LRICLSLEIPTTFPSSGTDGGGR*GWGRFP
Trigger: GGGGAATCTACCCCAACCCCAACGTCCCCCGCCATC...GGTCCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp ATCCAGTTTTGTCTTCCCTTCAAGGCCACATATGTCCTGTTGAGTCCAAAGCATACGTGGGTGTTAGGATaGCGGGGGACGTTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: IQFCLPFKATYVLLSPKHTWVLG*RGTLGL
Trigger: CAACCCCAACGTCCCCCGCCATCCTAACACCCACGT...ATGCTTTGGACTCAACAGGACATATGTGGCCTTGAAGGGAAGACAAAACTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp TCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTTGGAGTGGCAGAAGGTaGCCGTCTGGGTCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: SLALQSMFQLPSTEFGPPWSGRR*PSGSEV
Trigger: CACTTCAGACCCAGACGGCCACCTTCTGCCACTCCA...AGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp AAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCGCGAGGGAGAGACGGTaGGATGGTGATGAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: KRTALANLLEFRNPYNFSARERR*DGDEVG
Trigger: CCCCACTTCATCACCATCCCACCGTCTCTCCCTCGC...GGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344954.10
ENST00000608303.5
CDS-3UTR TCA 90 bp TTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGACCTGCCGCTCCGTACGCTaGGTCAAAGAGGGACTGGTC +
Preference number: 4 (lower is better)
Translates to: LRICLSLEIPTTFPSSGTCRSVR*VKEGLV
Trigger: GACCAGTCCCTCTTTGACTCAGCGTACGGAGCGGCA...GGTCCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp ATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTCATAAAGTGGTGGGAGGGGGTTaGTCTTGTGGGGCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: ILCHTEPRVLTRNCFGHKVVGGG*SCGAAR
Trigger: ACGGGCAGCCCCACAAGATCAACCCCCTCCCACCAC...TTTATGACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp GTCCTTACATACAGGTTTATCCATGGCCTTAGCTGCTGTTTTATAAAACCCTTTGTGGTGGGAGGGGGTTaGTCTTGTGGGGCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: VLTYRFIHGLSCCFIKPFVVGGG*SCGAAR
Trigger: ACGGGCAGCCCCACAAGATCAACCCCCTCCCACCAC...AAAGGGTTTTATAAAACAGCAGCTAAGGCCATGGATAAACCTGTATGTAAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp ATCCAGTTTTGTCTTCCCTTCAAGGCCACATATGTCCTGTTGAGTCCAAAGCATCCCTCACTGGCTGATTaGTCCACTCCTGCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: IQFCLPFKATYVLLSPKHPSLAD*STPAVV
Trigger: CACCACAGCAGGAGTGGATCAATCAGCCAGTGAGGG...ATGCTTTGGACTCAACAGGACATATGTGGCCTTGAAGGGAAGACAAAACTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp ACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCTTTGTTCAGTCGGGCCCAGGATCTaGTACGGATCTGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: TENSNWHTGPWNYSSLCSVGPRI*YGSGWG
Trigger: GCCCCAGCCAGATCCGTATCAGATCCTGGGCCCGAC...TGAACAAAGAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp ATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTCATAAAGTCGGGCCCAGGATCTaGTACGGATCTGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: ILCHTEPRVLTRNCFGHKVGPRI*YGSGWG
Trigger: GCCCCAGCCAGATCCGTATCAGATCCTGGGCCCGAC...TTTATGACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp ATATGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTGGAGGTCCAGTATTGTaGTGCGGCTCCAAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: ICPVESKASSKCAGWASAGGPVL*CGSKEA
Trigger: AGCTTCTTTGGAGCCGCATCACAATACTGGACCTCC...AGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp GGTCAGCTGAGTGCATACTGTCCACTGAGAGGGATTCTGCAATGCCCTTGGCGTTCTCAAACCAGAACATaGCGGGTTAAGTCCATGATT +
Preference number: 4 (lower is better)
Translates to: GQLSAYCPLRGILQCPWRSQTRT*RVKSMI
Trigger: AATCATGGACTTAACCCGTCATGTTCTGGTTTGAGA...ACGCCAAGGGCATTGCAGAATCCCTCTCAGTGGACAGTATGCACTCAGCTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp ATCCAGTTTTGTCTTCCCTTCAAGGCCACATATGTCCTGTTGAGTCCAAAGCATCCTGGTCTGATGGTCTaGCAAGCGCACAGCACTTGC +
Preference number: 4 (lower is better)
Translates to: IQFCLPFKATYVLLSPKHPGLMV*QAHSTC
Trigger: GCAAGTGCTGTGCGCTTGTCAGACCATCAGACCAGG...ATGCTTTGGACTCAACAGGACATATGTGGCCTTGAAGGGAAGACAAAACTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp TCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTCCAGGGAAAACCCTTTaGCCTAACGGGGGCGGTAAA +
Preference number: 4 (lower is better)
Translates to: SLALQSMFQLPSTEFGPPPGKTL*PNGGGK
Trigger: TTTACCGCCCCCGTTAGGTCAAAGGGTTTTCCCTGG...AGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp CTGACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTCCTGGTCTGAGACCTaGAGGAAGCAGGGCGCTTAT +
Preference number: 4 (lower is better)
Translates to: LTSAQHLRICLSLEIPTTSWSET*RKQGAY
Trigger: ATAAGCGCCCTGCTTCCTTCAGGTCTCAGACCAGGA...AGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR GCA 90 bp TCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTGCCCTCACTCCCCTGTaGACGTTTGTTGTTGTAGCG +
Preference number: 4 (lower is better)
Translates to: SLALQSMFQLPSTEFGPPALTPL*TFVVVA
Trigger: CGCTACAACAACAAACGTGCACAGGGGAGTGAGGGC...AGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281428.12
ENST00000527786.7
CDS-3UTR GCA 90 bp TGTTACACGCATTTCCAAAGCATTAAAGATCTAAATGGATTATCTTTTCCCTGCTCCCTGCGTGCCCCCTaGGAGCGCCCTGCCCTCACT +
Preference number: 4 (lower is better)
Translates to: CYTHFQSIKDLNGLSFPCSLRAP*ERPALT
Trigger: AGTGAGGGCAGGGCGCTCGCAGGGGGCACGCAGGGA...GCAGGGAAAAGATAATCCATTTAGATCTTTAATGCTTTGGAAATGCGTGTAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR GCA 90 bp AAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCGCCCACTCCAGCCATTaGCTCACATGCTCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: KRTALANLLEFRNPYNFSAHSSH*LTCSCV
Trigger: GACACAGGAGCATGTGAGGCAATGGCTGGAGTGGGC...GGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR GCA 90 bp TGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTAGATCTGGCTGGGGCCGTTaGTCTGTATTCTTACTGATC +
Preference number: 4 (lower is better)
Translates to: CPVESKASSKCAGWASARSGWGR*SVFLLI
Trigger: GATCAGTAAGAATACAGAGCAACGGCCCCAGCCAGA...TCTAGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp TCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAGGTTGGCTAGGCGACTaGTGGTCGGGCCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: SIKFQLGENFTGLTINVPGWLGD*WSGPGS
Trigger: AGATCCTGGGCCCGACCAGCAGTCGCCTAGCCAACC...TGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp TTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGACCTGCCACAGCTGGATCTaGCCGCTTCCAGGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: LRICLSLEIPTTFPSSGTCHSWI*PLPGLA
Trigger: AGCCAACCCTGGAAGCGGGCAGATCCAGCTGTGGCA...GGTCCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp TCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCATCGGTCGGATGTGGCTaGAGAGCCTGGGCAATGCCG +
Preference number: 4 (lower is better)
Translates to: SIKFQLGENFTGLTINVPSVGCG*RAWAMP
Trigger: CGGCATTGCCCAGGCTCTGCAGCCACATCCGACCGA...TGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp CTTGGCGTCTTAAACACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAACAGTCATGTCGGCCTTaGGGAGATGGGCTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: LGVLNTQTFFPSNSSWVKQSCRP*GDGLPL
Trigger: GAGCGGCAGCCCATCTCCCCAAGGCCGACATGACTG...TTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTGTTTAAGACGCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp TCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCACAGTCATGTCGGCCTTaGGGAGATGGGCTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: SIKFQLGENFTGLTINVPQSCRP*GDGLPL
Trigger: GAGCGGCAGCCCATCTCCCCAAGGCCGACATGACTG...TGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp AGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTCCACTCCTGCTGTGGTaGGAGGGGGTTGATCTTGTG +
Preference number: 4 (lower is better)
Translates to: SWVKTSLALQSMFQLPSTPLLLW*EGVDLV
Trigger: CACAAGATCAACCCCCTCCCACCACAGCAGGAGTGG...AGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp AAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCCCACTCCTGCTGTGGTaGGAGGGGGTTGATCTTGTG +
Preference number: 4 (lower is better)
Translates to: KRTALANLLEFRNPYNFSPLLLW*EGVDLV
Trigger: CACAAGATCAACCCCCTCCCACCACAGCAGGAGTGG...GGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp ATATGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTGACGTTGACCCTCACTaGCTGATTGATCCACTCCTG +
Preference number: 4 (lower is better)
Translates to: ICPVESKASSKCAGWASADVDPH*LIDPLL
Trigger: CAGGAGTGGATCAATCAGCCAGTGAGGGTCAACGTC...AGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp TGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTAGACTGGATCCATTCATGTaGTCATACTCCCGCTTGACG +
Preference number: 4 (lower is better)
Translates to: CPVESKASSKCAGWASARLDPFM*SYSRLT
Trigger: CGTCAAGCGGGAGTATGACCACATGAATGGATCCAG...TCTAGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp TCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTAGCTGTTGTAGTTCATaGGGTTGGACTCGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: SLALQSMFQLPSTEFGPPSCCSS*GWTRLR
Trigger: GCGGAGGCGAGTCCAACCCCATGAACTACAACAGCT...AGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp ATATGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTAGCTGTACTCCTTTATaGCCCACTCCAGCCATTGCC +
Preference number: 4 (lower is better)
Translates to: ICPVESKASSKCAGWASASCTPL*PTPAIA
Trigger: GGCAATGGCTGGAGTGGGCCATAAAGGAGTACAGCT...AGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp GCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCTGTTGTAGAGGGTGGTaGCGCGGAGGAAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ARRLRIQTGILAHGIIHLCCRGW*RGGSPP
Trigger: AGGAGGACTTCCTCCGCGCCACCACCCTCTACAACA...GAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp TCCATGATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTTGGCTAGGCGACTGCTaGTCGGGCCCAGGATCTGAT +
Preference number: 4 (lower is better)
Translates to: SMILCHTEPRVLTRNCFGWLGDC*SGPGSD
Trigger: ATCAGATCCTGGGCCCGACCAGCAGTCGCCTAGCCA...ACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAATCATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp CACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTTGGCTAGGCGACTGCTaGTCGGGCCCAGGATCTGAT +
Preference number: 4 (lower is better)
Translates to: HTNLLSIKFQLGENFTGLWLGDC*SGPGSD
Trigger: ATCAGATCCTGGGCCCGACCAGCAGTCGCCTAGCCA...AAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp CACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGTGGCTAGGCGACTGCTaGTCGGGCCCAGGATCTGAT +
Preference number: 4 (lower is better)
Translates to: HLRICLSLEIPTTFPSSGWLGDC*SGPGSD
Trigger: ATCAGATCCTGGGCCCGACCAGCAGTCGCCTAGCCA...CCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp GACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTAGGAATTGCCACAGCTaGATCTGCCCGCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: DKRTALANLLEFRNPYNFRNCHS*ICPLPG
Trigger: CCCTGGAAGCGGGCAGATCCAGCTGTGGCAATTCCT...AAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp CACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGCGACTCGGTCGGATGTaGCTGCAGAGCCTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: HLRICLSLEIPTTFPSSGRLGRM*LQSLGN
Trigger: ATTGCCCAGGCTCTGCAGCCACATCCGACCGAGTCG...CCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp TGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTAAAACGACTCGGTCGGATGTaGCTGCAGAGCCTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: WPYNQCSSCHPLNLVLLKRLGRM*LQSLGN
Trigger: ATTGCCCAGGCTCTGCAGCCACATCCGACCGAGTCG...TTTTAGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp TCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAGATGGCGGGGGACGTTaGGGTTGGGGTAGATTCCCC +
Preference number: 4 (lower is better)
Translates to: SIKFQLGENFTGLTINVPDGGGR*GWGRFP
Trigger: GGGGAATCTACCCCAACCCCAACGTCCCCCGCCATC...TGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp TGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTAAAAACGTGGGTGTTAGGATaGCGGGGGACGTTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: WPYNQCSSCHPLNLVLLKTWVLG*RGTLGL
Trigger: CAACCCCAACGTCCCCCGCCATCCTAACACCCACGT...TTTTAGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp ATATGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTCTGATTGGTTGGCCCTaGTCTGATGGTCTGACAAGC +
Preference number: 4 (lower is better)
Translates to: ICPVESKASSKCAGWASALIGWP*SDGLTS
Trigger: GCTTGTCAGACCATCAGACCAGGGCCAACCAATCAG...AGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp AAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCTGGAGTGGCAGAAGGTaGCCGTCTGGGTCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: KRTALANLLEFRNPYNFSWSGRR*PSGSEV
Trigger: CACTTCAGACCCAGACGGCCACCTTCTGCCACTCCA...GGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp ATCCAGTTTTGTCTTCCCTTCAAGGCCACATATGTCCTGTTGAGTCCAAAGCATTGGAGTGGCAGAAGGTaGCCGTCTGGGTCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: IQFCLPFKATYVLLSPKHWSGRR*PSGSEV
Trigger: CACTTCAGACCCAGACGGCCACCTTCTGCCACTCCA...ATGCTTTGGACTCAACAGGACATATGTGGCCTTGAAGGGAAGACAAAACTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp CACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTCCCTCACTGGCTGATTaGTCCACTCCTGCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: HTNLLSIKFQLGENFTGLPSLAD*STPAVV
Trigger: CACCACAGCAGGAGTGGATCAATCAGCCAGTGAGGG...AAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp GATGCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCCCTCACTGGCTGATTaGTCCACTCCTGCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: DARRLRIQTGILAHGIIHPSLAD*STPAVV
Trigger: CACCACAGCAGGAGTGGATCAATCAGCCAGTGAGGG...ATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp TTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGACCCCCTCACTGGCTGATTaGTCCACTCCTGCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: LRICLSLEIPTTFPSSGTPSLAD*STPAVV
Trigger: CACCACAGCAGGAGTGGATCAATCAGCCAGTGAGGG...GGTCCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp ACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCTTTGTTCAGGTCTGCGGGGACGATaGCTCTCCTCTCGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: TENSNWHTGPWNYSSLCSGLRGR*LSSRWW
Trigger: CCACCAACGAGAGGAGAGTCATCGTCCCCGCAGACC...TGAACAAAGAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp ATATGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTTTTGACACTCAATCGTaGGGATTGGTCGGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: ICPVESKASSKCAGWASAFDTQS*GLVGVG
Trigger: TCCCACACCGACCAATCCTCACGATTGAGTGTCAAA...AGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp ATATGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTCCCAAGCTCCTCTTCTaGCTGAGTCATAAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: ICPVESKASSKCAGWASAPKLLF*LSHKKG
Trigger: ACCCTTCTTATGACTCAGTCAGAAGAGGAGCTTGGG...AGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp GCCATTCTTCTCGTCCATATAGCTGTTGTAGTTCATGGGGTTGGACTCGCCTCCGACGGGTTAAGTCCATaGTTCTGTGTCATACTGAAC +
Preference number: 4 (lower is better)
Translates to: AILLVHIAVVVHGVGLASDGLSP*FCVILN
Trigger: GTTCAGTATGACACAGAATCATGGACTTAACCCGTC...GGAGGCGAGTCCAACCCCATGAACTACAACAGCTATATGGACGAGAAGAATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429175.7
CDS-3UTR TCA 90 bp CACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGCCTGGTCTGATGGTCTaGCAAGCGCACAGCACTTGC +
Preference number: 4 (lower is better)
Translates to: HLRICLSLEIPTTFPSSGPGLMV*QAHSTC
Trigger: GCAAGTGCTGTGCGCTTGTCAGACCATCAGACCAGG...CCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp TTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGACCTGGTTGGCCCTGGTCTaGTGGTCTGACAAGCGCACA +
Preference number: 4 (lower is better)
Translates to: LRICLSLEIPTTFPSSGTWLALV*WSDKRT
Trigger: TGTGCGCTTGTCAGACCATCAGACCAGGGCCAACCA...GGTCCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp TCCATGATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTTGGTTGGCCCTGGTCTaGTGGTCTGACAAGCGCACA +
Preference number: 4 (lower is better)
Translates to: SMILCHTEPRVLTRNCFGWLALV*WSDKRT
Trigger: TGTGCGCTTGTCAGACCATCAGACCAGGGCCAACCA...ACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAATCATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp AAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCTGGTTGGCCCTGGTCTaGTGGTCTGACAAGCGCACA +
Preference number: 4 (lower is better)
Translates to: KLHWPYNQCSSCHPLNLVWLALV*WSDKRT
Trigger: TGTGCGCTTGTCAGACCATCAGACCAGGGCCAACCA...GACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp GCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCCCAGGGAAAACCCTTTaGCCTAACGGGGGCGGTAAA +
Preference number: 4 (lower is better)
Translates to: ARRLRIQTGILAHGIIHLPGKTL*PNGGGK
Trigger: TTTACCGCCCCCGTTAGGTCAAAGGGTTTTCCCTGG...GAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp TGTTACACGCATTTCCAAAGCATTAAAGATCTAAATGGATTATCTTTTCCCTGCGTGGCCGTCTGGGTCTaGAGTGCCCAGGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: CYTHFQSIKDLNGLSFPCVAVWV*SAQGRL
Trigger: CAGCCTCCCCTGGGCACTTCAGACCCAGACGGCCAC...GCAGGGAAAAGATAATCCATTTAGATCTTTAATGCTTTGGAAATGCGTGTAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR GCA 90 bp ACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTGCCCACTCCAGCCATTaGCTCACATGCTCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: TSAQHLRICLSLEIPTTFAHSSH*LTCSCV
Trigger: GACACAGGAGCATGTGAGGCAATGGCTGGAGTGGGC...AAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR GCA 90 bp GTCCTTACATACAGGTTTATCCATGGCCTTAGCTGCTGTTTTATAAAACCCTTTGGTTGGCTAGGCGACTaGTGGTCGGGCCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: VLTYRFIHGLSCCFIKPFGWLGD*WSGPGS
Trigger: AGATCCTGGGCCCGACCAGCAGTCGCCTAGCCAACC...AAAGGGTTTTATAAAACAGCAGCTAAGGCCATGGATAAACCTGTATGTAAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR GCA 90 bp TGTGATGCGGCTCCAAAGAAGCTGGAGGAAGTGACAGGCATGGAGGATGGATGGAATCAATGTTCCAGTTaGCATCCACTGAATTTGGTC +
Preference number: 4 (lower is better)
Translates to: CDAAPKKLEEVTGMEDGWNQCSS*HPLNLV
Trigger: GACCAAATTCAGTGGATGGCAACTGGAACATTGATT...CCATCCATCCTCCATGCCTGTCACTTCCTCCAGCTTCTTTGGAGCCGCATCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
CDS-3UTR GCA 90 bp GTCCATATAGCTGTTGTAGTTCATGGGGTTGGACTCGCCTCCGCCCACCAGCTTTTCCCTGCTTGTGTATaGCTGTTAAATAACTGTACC +
Preference number: 4 (lower is better)
Translates to: VHIAVVVHGVGLASAHQLFPACV*LLNNCT
Trigger: GGTACAGTTATTTAACAGGCATACACAAGCAGGGAA...AAGCTGGTGGGCGGAGGCGAGTCCAACCCCATGAACTACAACAGCTATATGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429175.7
CDS-3UTR CCA 90 bp AGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTATAGTCCCGTCCATTTaGCCAAGTCTGCAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: SWVKTSLALQSMFQLPSTIVPSI*PSLQPS
Trigger: GCTCGGCTGCAGACTTGGCCAAATGGACGGGACTAT...AGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp GACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTGATCCACTCCTGCTGTaGTGGGAGGGGGTTGATCTT +
Preference number: 4 (lower is better)
Translates to: DKRTALANLLEFRNPYNFDPLLL*WEGVDL
Trigger: AAGATCAACCCCCTCCCACCACAGCAGGAGTGGATC...AAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp CTGACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTGACGTTGACCCTCACTaGCTGATTGATCCACTCCTG +
Preference number: 4 (lower is better)
Translates to: LTSAQHLRICLSLEIPTTDVDPH*LIDPLL
Trigger: CAGGAGTGGATCAATCAGCCAGTGAGGGTCAACGTC...AGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp GACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTGAGGCAGCTGGCGCCTaGATCCATTCATGTGGTCAT +
Preference number: 4 (lower is better)
Translates to: DKRTALANLLEFRNPYNFEAAGA*IHSCGH
Trigger: ATGACCACATGAATGGATCCAGGCGCCAGCTGCCTC...AAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281428.12
ENST00000429175.7
CDS-3UTR CCA 90 bp TTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGACCTGTAGTTCATGGGGTTaGACTCGCCTCCGCCCACCA +
Preference number: 4 (lower is better)
Translates to: LRICLSLEIPTTFPSSGTCSSWG*TRLRPP
Trigger: TGGTGGGCGGAGGCGAGTCCAACCCCATGAACTACA...GGTCCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp AGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTAGCTGTTGTAGTTCATaGGGTTGGACTCGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: SWVKTSLALQSMFQLPSTSCCSS*GWTRLR
Trigger: GCGGAGGCGAGTCCAACCCCATGAACTACAACAGCT...AGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp ATCCAGTTTTGTCTTCCCTTCAAGGCCACATATGTCCTGTTGAGTCCAAAGCATAGCTGTTGTAGTTCATaGGGTTGGACTCGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: IQFCLPFKATYVLLSPKHSCCSS*GWTRLR
Trigger: GCGGAGGCGAGTCCAACCCCATGAACTACAACAGCT...ATGCTTTGGACTCAACAGGACATATGTGGCCTTGAAGGGAAGACAAAACTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp TGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTAAAACTCTCCTCTCGTTGGTaGTCATGTTGGGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: WPYNQCSSCHPLNLVLLKLSSRW*SCWEEG
Trigger: CCCCTCCTCCCAACATGACCACCAACGAGAGGAGAG...TTTTAGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp GCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCGATCTGATACGGATCTaGCTGGGGCCGTTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: ARRLRIQTGILAHGIIHLDLIRI*LGPLLC
Trigger: ACAGAGCAACGGCCCCAGCCAGATCCGTATCAGATC...GAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp ATCCAGTTTTGTCTTCCCTTCAAGGCCACATATGTCCTGTTGAGTCCAAAGCATGATCTGATACGGATCTaGCTGGGGCCGTTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: IQFCLPFKATYVLLSPKHDLIRI*LGPLLC
Trigger: ACAGAGCAACGGCCCCAGCCAGATCCGTATCAGATC...ATGCTTTGGACTCAACAGGACATATGTGGCCTTGAAGGGAAGACAAAACTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp GACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTGATCTGATACGGATCTaGCTGGGGCCGTTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: DKRTALANLLEFRNPYNFDLIRI*LGPLLC
Trigger: ACAGAGCAACGGCCCCAGCCAGATCCGTATCAGATC...AAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp GATGCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATAGGAATTGCCACAGCTaGATCTGCCCGCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: DARRLRIQTGILAHGIIHRNCHS*ICPLPG
Trigger: CCCTGGAAGCGGGCAGATCCAGCTGTGGCAATTCCT...ATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp TGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTAAAAAGGAATTGCCACAGCTaGATCTGCCCGCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: WPYNQCSSCHPLNLVLLKRNCHS*ICPLPG
Trigger: CCCTGGAAGCGGGCAGATCCAGCTGTGGCAATTCCT...TTTTAGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp ATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTCATAAAGATGGCGGGGGACGTTaGGGTTGGGGTAGATTCCCC +
Preference number: 4 (lower is better)
Translates to: ILCHTEPRVLTRNCFGHKDGGGR*GWGRFP
Trigger: GGGGAATCTACCCCAACCCCAACGTCCCCCGCCATC...TTTATGACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp GTCCATATAGCTGTTGTAGTTCATGGGGTTGGACTCGCCTCCGCCCACCAGCTTTGGCATACTGGCCCATaGAATTATTCATCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: VHIAVVVHGVGLASAHQLWHTGP*NYSSLC
Trigger: ACAAAGAGATGAATAATTCCATGGGCCAGTATGCCA...AAGCTGGTGGGCGGAGGCGAGTCCAACCCCATGAACTACAACAGCTATATGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429175.7
CDS-3UTR CCA 90 bp AGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGCGCTTATTCTTTGCTaGAGTGGCAGAAGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: SWVKTSLALQSMFQLPSTALILC*SGRRWP
Trigger: CGGCCACCTTCTGCCACTCCAGCAAAGAATAAGCGC...AGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp GACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTGCGCTTATTCTTTGCTaGAGTGGCAGAAGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: DKRTALANLLEFRNPYNFALILC*SGRRWP
Trigger: CGGCCACCTTCTGCCACTCCAGCAAAGAATAAGCGC...AAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp TCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTCCACCGGAGACTCCCTaGATCCATTCATGTGGTCAT +
Preference number: 4 (lower is better)
Translates to: SLALQSMFQLPSTEFGPPPPETP*IHSCGH
Trigger: ATGACCACATGAATGGATCCAGGGAGTCTCCGGTGG...AGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp TGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTAAAACTCAATTCCACTTCCTaGGGAGGGGGCTCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: WPYNQCSSCHPLNLVLLKLNSTS*GGGSAV
Trigger: CACTGCTGAGCCCCCTCCCCAGGAAGTGGAATTGAG...TTTTAGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534087.3
3UTR CAA 72 bp CAGTTTTGTCTTCCCTTCAAGGCCACATATGTCCTGTaGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGG +
Preference number: 4 (lower is better)
Translates to: QFCLPFKATYVL*SPKHPVSVQDG
Trigger: CCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACATATGTGGCCTTGAAGGGAAGACAAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR CAA 72 bp AAATCTCACAGACCAGTCTGGATAGACCAGCTCGCTTaGCTCCAGTCCTTACATACAGGTTTATCCATGGCC +
Preference number: 4 (lower is better)
Translates to: KSHRPVWIDQLA*LQSLHTGLSMA
Trigger: GGCCATGGATAAACCTGTATGTAAGGACTGGAGCAAAGCGAGCTGGTCTATCCAGACTGGTCTGTGAGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp AGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTTTGACCCTCACTGGCTaGTTGATCCACTCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SWVKTSLALQSMFQLPSTLTLTG*LIHSCC
Trigger: ACAGCAGGAGTGGATCAATCAGCCAGTGAGGGTCAA...AGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp CTGACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTGAGGTAACTGAGGTGTaGCAACAGCACTTCCGTGTT +
Preference number: 4 (lower is better)
Translates to: LTSAQHLRICLSLEIPTTEVTEV*QQHFRV
Trigger: AACACGGAAGTGCTGTTGTCACACCTCAGTTACCTC...AGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp TCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTGAGGTAACTGAGGTGTaGCAACAGCACTTCCGTGTT +
Preference number: 4 (lower is better)
Translates to: SLALQSMFQLPSTEFGPPEVTEV*QQHFRV
Trigger: AACACGGAAGTGCTGTTGTCACACCTCAGTTACCTC...AGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp TCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTCCCAAGCTCCTCTTCTaGCTGAGTCATAAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: SLALQSMFQLPSTEFGPPPKLLF*LSHKKG
Trigger: ACCCTTCTTATGACTCAGTCAGAAGAGGAGCTTGGG...AGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp AAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCGGAGGTCCAGTATTGTaGTGCGGCTCCAAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: KRTALANLLEFRNPYNFSGGPVL*CGSKEA
Trigger: AGCTTCTTTGGAGCCGCATCACAATACTGGACCTCC...GGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp ACAGTAAGTTGCCTTCTGATTGGTTGGCCCTGGTCTGATGGTCTGACAAGCGCAAAGATGCTAGGAGACTaGGAATTCAAACTGGCATAC +
Preference number: 4 (lower is better)
Translates to: TVSCLLIGWPWSDGLTSAKMLGD*EFKLAY
Trigger: GTATGCCAGTTTGAATTCTCAGTCTCCTAGCATCTT...TGCGCTTGTCAGACCATCAGACCAGGGCCAACCAATCAGAAGGCAACTTACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp AAGTGTGCAGGATGGGCTTCAGCTAGAAGGCCACTGATGAGTAAGCTTCTAGTACTGAACCCCGTGTATTaGCAAGAAACTGCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: KCAGWASARRPLMSKLLVLNPVY*QETALV
Trigger: GACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAG...TACTAGAAGCTTACTCATCAGTGGCCTTCTAGCTGAAGCCCATCCTGCACACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
CDS-3UTR TCA 90 bp ATCCAGTTTTGTCTTCCCTTCAAGGCCACATATGTCCTGTTGAGTCCAAAGCATGTGCATACTGTCCACTaGGAGGGATTCTGCAATGCC +
Preference number: 4 (lower is better)
Translates to: IQFCLPFKATYVLLSPKHVHTVH*EGFCNA
Trigger: GGCATTGCAGAATCCCTCTCAGTGGACAGTATGCAC...ATGCTTTGGACTCAACAGGACATATGTGGCCTTGAAGGGAAGACAAAACTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp CTTGGCGTCTTAAACACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAATGGTTGGCCCTGGTCTaGTGGTCTGACAAGCGCACA +
Preference number: 4 (lower is better)
Translates to: LGVLNTQTFFPSNSSWVKWLALV*WSDKRT
Trigger: TGTGCGCTTGTCAGACCATCAGACCAGGGCCAACCA...TTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTGTTTAAGACGCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp ACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAGGGAAAACCCTTTaGCCTAACGGGGGCGGTAAA +
Preference number: 4 (lower is better)
Translates to: TSAQHLRICLSLEIPTTFPGKTL*PNGGGK
Trigger: TTTACCGCCCCCGTTAGGTCAAAGGGTTTTCCCTGG...AAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp CACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTTCCTGGTCTGAGACCTaGAGGAAGCAGGGCGCTTAT +
Preference number: 4 (lower is better)
Translates to: HTNLLSIKFQLGENFTGLSWSET*RKQGAY
Trigger: ATAAGCGCCCTGCTTCCTTCAGGTCTCAGACCAGGA...AAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp TGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTAAAATCCTGGTCTGAGACCTaGAGGAAGCAGGGCGCTTAT +
Preference number: 4 (lower is better)
Translates to: WPYNQCSSCHPLNLVLLKSWSET*RKQGAY
Trigger: ATAAGCGCCCTGCTTCCTTCAGGTCTCAGACCAGGA...TTTTAGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR GCA 90 bp GCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCAGCCATTGCCTCACATaGTCCTGTGTCCACAGTGTG +
Preference number: 4 (lower is better)
Translates to: ARRLRIQTGILAHGIIHLSHCLT*SCVHSV
Trigger: CACACTGTGGACACAGGAGCATGTGAGGCAATGGCT...GAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR GCA 90 bp ATCCAGTTTTGTCTTCCCTTCAAGGCCACATATGTCCTGTTGAGTCCAAAGCATAGCCATTGCCTCACATaGTCCTGTGTCCACAGTGTG +
Preference number: 4 (lower is better)
Translates to: IQFCLPFKATYVLLSPKHSHCLT*SCVHSV
Trigger: CACACTGTGGACACAGGAGCATGTGAGGCAATGGCT...ATGCTTTGGACTCAACAGGACATATGTGGCCTTGAAGGGAAGACAAAACTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR GCA 90 bp GCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCCTTACTGATCGTTTGTaGCCCTCCAAGGGGAGGACT +
Preference number: 4 (lower is better)
Translates to: ARRLRIQTGILAHGIIHLLTDRL*PSKGRT
Trigger: AGTCCTCCCCTTGGAGGGGCACAAACGATCAGTAAG...GAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp ACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCTTTGTTCATGCCACAGCTGGATCTaGCCGCTTCCAGGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: TENSNWHTGPWNYSSLCSCHSWI*PLPGLA
Trigger: AGCCAACCCTGGAAGCGGGCAGATCCAGCTGTGGCA...TGAACAAAGAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp GACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTGAGTGGTCAGCTGAGTaGATACTGTCCACTGAGAGG +
Preference number: 4 (lower is better)
Translates to: DKRTALANLLEFRNPYNFEWSAE*ILSTER
Trigger: CCTCTCAGTGGACAGTATGCACTCAGCTGACCACTC...AAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp ATCCAGTTTTGTCTTCCCTTCAAGGCCACATATGTCCTGTTGAGTCCAAAGCATGTGCCCAGGGGAGGCTaGAGAGTTAAATCTCACAGA +
Preference number: 4 (lower is better)
Translates to: IQFCLPFKATYVLLSPKHVPRGG*RVKSHR
Trigger: TCTGTGAGATTTAACTCTGCAGCCTCCCCTGGGCAC...ATGCTTTGGACTCAACAGGACATATGTGGCCTTGAAGGGAAGACAAAACTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR GCA 90 bp AAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCGTGCCCAGGGGAGGCTaGAGAGTTAAATCTCACAGA +
Preference number: 4 (lower is better)
Translates to: KRTALANLLEFRNPYNFSVPRGG*RVKSHR
Trigger: TCTGTGAGATTTAACTCTGCAGCCTCCCCTGGGCAC...GGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp TGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTAAAAGATCCACTCCTGCTGTaGTGGGAGGGGGTTGATCTT +
Preference number: 4 (lower is better)
Translates to: WPYNQCSSCHPLNLVLLKDPLLL*WEGVDL
Trigger: AAGATCAACCCCCTCCCACCACAGCAGGAGTGGATC...TTTTAGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp GACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTGACGTTGACCCTCACTaGCTGATTGATCCACTCCTG +
Preference number: 4 (lower is better)
Translates to: DKRTALANLLEFRNPYNFDVDPH*LIDPLL
Trigger: CAGGAGTGGATCAATCAGCCAGTGAGGGTCAACGTC...AAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp AAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCGACGTTGACCCTCACTaGCTGATTGATCCACTCCTG +
Preference number: 4 (lower is better)
Translates to: KRTALANLLEFRNPYNFSDVDPH*LIDPLL
Trigger: CAGGAGTGGATCAATCAGCCAGTGAGGGTCAACGTC...GGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp GTCCTTACATACAGGTTTATCCATGGCCTTAGCTGCTGTTTTATAAAACCCTTTCCGTGTTGTAGAGGGTaGTGGCGCGGAGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: VLTYRFIHGLSCCFIKPFPCCRG*WRGGSP
Trigger: AGGACTTCCTCCGCGCCACCACCCTCTACAACACGG...AAAGGGTTTTATAAAACAGCAGCTAAGGCCATGGATAAACCTGTATGTAAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281428.12
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp ATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTCATAAACCGTGTTGTAGAGGGTaGTGGCGCGGAGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: ILCHTEPRVLTRNCFGHKPCCRG*WRGGSP
Trigger: AGGACTTCCTCCGCGCCACCACCCTCTACAACACGG...TTTATGACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp CTGACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTCTCAATCGTGAGGATTaGTCGGTGTGGGAGGTTGTA +
Preference number: 4 (lower is better)
Translates to: LTSAQHLRICLSLEIPTTLNRED*SVWEVV
Trigger: TACAACCTCCCACACCGACCAATCCTCACGATTGAG...AGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp TCCATGATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTGATCTGATACGGATCTaGCTGGGGCCGTTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: SMILCHTEPRVLTRNCFGDLIRI*LGPLLC
Trigger: ACAGAGCAACGGCCCCAGCCAGATCCGTATCAGATC...ACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAATCATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp TCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAAGGAATTGCCACAGCTaGATCTGCCCGCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SIKFQLGENFTGLTINVPRNCHS*ICPLPG
Trigger: CCCTGGAAGCGGGCAGATCCAGCTGTGGCAATTCCT...TGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp TCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTAAGGGTACTTGTACATaGACGACTCGGTCGGATGTG +
Preference number: 4 (lower is better)
Translates to: SLALQSMFQLPSTEFGPPKGTCT*TTRSDV
Trigger: CACATCCGACCGAGTCGTCCATGTACAAGTACCCTT...AGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp CTGACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTAAGGGTACTTGTACATaGACGACTCGGTCGGATGTG +
Preference number: 4 (lower is better)
Translates to: LTSAQHLRICLSLEIPTTKGTCT*TTRSDV
Trigger: CACATCCGACCGAGTCGTCCATGTACAAGTACCCTT...AGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp AAACTGGAGACAAATGTTCCGAAACACATCCCATTTCATTTAGGTAGACATGTTGATGGCGGGGGACGTTaGGGTTGGGGTAGATTCCCC +
Preference number: 4 (lower is better)
Translates to: KLETNVPKHIPFHLGRHVDGGGR*GWGRFP
Trigger: GGGGAATCTACCCCAACCCCAACGTCCCCCGCCATC...AACATGTCTACCTAAATGAAATGGGATGTGTTTCGGAACATTTGTCTCCAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp AGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTCTGATTGGTTGGCCCTaGTCTGATGGTCTGACAAGC +
Preference number: 4 (lower is better)
Translates to: SWVKTSLALQSMFQLPSTLIGWP*SDGLTS
Trigger: GCTTGTCAGACCATCAGACCAGGGCCAACCAATCAG...AGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp CTGACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTCTCACAGACCAGTCTaGATAGACCAGCTCGCTTTG +
Preference number: 4 (lower is better)
Translates to: LTSAQHLRICLSLEIPTTSHRPV*IDQLAL
Trigger: CAAAGCGAGCTGGTCTATCCAGACTGGTCTGTGAGA...AGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp AGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTTATTCTTTGCTGGAGTaGCAGAAGGTGGCCGTCTGG +
Preference number: 4 (lower is better)
Translates to: SWVKTSLALQSMFQLPSTYSLLE*QKVAVW
Trigger: CCAGACGGCCACCTTCTGCCACTCCAGCAAAGAATA...AGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp GCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCCAATATTCCACACATTaGCCCGGTTACAGCCTGACC +
Preference number: 4 (lower is better)
Translates to: ARRLRIQTGILAHGIIHLQYSTH*PGYSLT
Trigger: GGTCAGGCTGTAACCGGGTCAATGTGTGGAATATTG...GAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp AGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTCAATATTCCACACATTaGCCCGGTTACAGCCTGACC +
Preference number: 4 (lower is better)
Translates to: SWVKTSLALQSMFQLPSTQYSTH*PGYSLT
Trigger: GGTCAGGCTGTAACCGGGTCAATGTGTGGAATATTG...AGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp GATGCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATTTGACCCTCACTGGCTaGTTGATCCACTCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: DARRLRIQTGILAHGIIHLTLTG*LIHSCC
Trigger: ACAGCAGGAGTGGATCAATCAGCCAGTGAGGGTCAA...ATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp CACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTTTGACCCTCACTGGCTaGTTGATCCACTCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: HTNLLSIKFQLGENFTGLLTLTG*LIHSCC
Trigger: ACAGCAGGAGTGGATCAATCAGCCAGTGAGGGTCAA...AAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp GACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTTTGACACTCAATCGTaGGGATTGGTCGGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: DKRTALANLLEFRNPYNFFDTQS*GLVGVG
Trigger: TCCCACACCGACCAATCCTCACGATTGAGTGTCAAA...AAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp ATCCAGTTTTGTCTTCCCTTCAAGGCCACATATGTCCTGTTGAGTCCAAAGCATTTTGACACTCAATCGTaGGGATTGGTCGGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: IQFCLPFKATYVLLSPKHFDTQS*GLVGVG
Trigger: TCCCACACCGACCAATCCTCACGATTGAGTGTCAAA...ATGCTTTGGACTCAACAGGACATATGTGGCCTTGAAGGGAAGACAAAACTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp TCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTAGCTCCTCTTCTGACTaGGTCATAAGAAGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: SLALQSMFQLPSTEFGPPSSSSD*VIRRVF
Trigger: GAAGACCCTTCTTATGACTCAGTCAGAAGAGGAGCT...AGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp TTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGACCGGAGGTCCAGTATTGTaGTGCGGCTCCAAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: LRICLSLEIPTTFPSSGTGGPVL*CGSKEA
Trigger: AGCTTCTTTGGAGCCGCATCACAATACTGGACCTCC...GGTCCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp CACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTGTGCATACTGTCCACTaGGAGGGATTCTGCAATGCC +
Preference number: 4 (lower is better)
Translates to: HTNLLSIKFQLGENFTGLVHTVH*EGFCNA
Trigger: GGCATTGCAGAATCCCTCTCAGTGGACAGTATGCAC...AAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp ACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCTTTGTTCACCTGGTCTGATGGTCTaGCAAGCGCACAGCACTTGC +
Preference number: 4 (lower is better)
Translates to: TENSNWHTGPWNYSSLCSPGLMV*QAHSTC
Trigger: GCAAGTGCTGTGCGCTTGTCAGACCATCAGACCAGG...TGAACAAAGAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp TTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGCCTGGTCTGATGGTCTaGCAAGCGCACAGCACTTGC +
Preference number: 4 (lower is better)
Translates to: FFPSNSSWVKTSLALQSMPGLMV*QAHSTC
Trigger: GCAAGTGCTGTGCGCTTGTCAGACCATCAGACCAGG...CATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp TCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCATCCTGGTCTGAGACCTaGAGGAAGCAGGGCGCTTAT +
Preference number: 4 (lower is better)
Translates to: SIKFQLGENFTGLTINVPSWSET*RKQGAY
Trigger: ATAAGCGCCCTGCTTCCTTCAGGTCTCAGACCAGGA...TGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp GATGCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCATAAAGTCCTGGTCTaGGACCTGAAGGAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: DARRLRIQTGILAHGIIHHKVLV*DLKEAG
Trigger: CCCTGCTTCCTTCAGGTCTCAGACCAGGACTTTATG...ATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp AAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCATAAAGTCCTGGTCTaGGACCTGAAGGAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: KLHWPYNQCSSCHPLNLVHKVLV*DLKEAG
Trigger: CCCTGCTTCCTTCAGGTCTCAGACCAGGACTTTATG...GACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp TTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGCCGACAGAGCCTCCTTaGTGTAAGACGACGTGTCGG +
Preference number: 4 (lower is better)
Translates to: FFPSNSSWVKTSLALQSMPTEPP*CKTTCR
Trigger: CCGACACGTCGTCTTACATCAAGGAGGCTCTGTCGG...CATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344954.10
ENST00000608303.5
CDS-3UTR GCA 90 bp GATGCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATAGCCATTGCCTCACATaGTCCTGTGTCCACAGTGTG +
Preference number: 4 (lower is better)
Translates to: DARRLRIQTGILAHGIIHSHCLT*SCVHSV
Trigger: CACACTGTGGACACAGGAGCATGTGAGGCAATGGCT...ATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR GCA 90 bp GCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCTCTGGCTGGGGCCGTTaGTCTGTATTCTTACTGATC +
Preference number: 4 (lower is better)
Translates to: ARRLRIQTGILAHGIIHLSGWGR*SVFLLI
Trigger: GATCAGTAAGAATACAGAGCAACGGCCCCAGCCAGA...GAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp GACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTGCAGAGCCTGGGCAATaGCGTGGAAGTCAAATTTGT +
Preference number: 4 (lower is better)
Translates to: DKRTALANLLEFRNPYNFAEPGQ*RGSQIC
Trigger: ACAAATTTGACTTCCACGGCATTGCCCAGGCTCTGC...AAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp TTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGACCGAGTGGTCAGCTGAGTaGATACTGTCCACTGAGAGG +
Preference number: 4 (lower is better)
Translates to: LRICLSLEIPTTFPSSGTEWSAE*ILSTER
Trigger: CCTCTCAGTGGACAGTATGCACTCAGCTGACCACTC...GGTCCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp TCCATGATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTGAGTGGTCAGCTGAGTaGATACTGTCCACTGAGAGG +
Preference number: 4 (lower is better)
Translates to: SMILCHTEPRVLTRNCFGEWSAE*ILSTER
Trigger: CCTCTCAGTGGACAGTATGCACTCAGCTGACCACTC...ACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAATCATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp CACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTGTGCCCAGGGGAGGCTaGAGAGTTAAATCTCACAGA +
Preference number: 4 (lower is better)
Translates to: HTNLLSIKFQLGENFTGLVPRGG*RVKSHR
Trigger: TCTGTGAGATTTAACTCTGCAGCCTCCCCTGGGCAC...AAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp TCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAATAGTCCCGTCCATTTaGCCAAGTCTGCAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: SIKFQLGENFTGLTINVPIVPSI*PSLQPS
Trigger: GCTCGGCTGCAGACTTGGCCAAATGGACGGGACTAT...TGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp CTTGGCGTCTTAAACACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAATAGTCCCGTCCATTTaGCCAAGTCTGCAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: LGVLNTQTFFPSNSSWVKIVPSI*PSLQPS
Trigger: GCTCGGCTGCAGACTTGGCCAAATGGACGGGACTAT...TTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTGTTTAAGACGCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp ATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTCATAAAGAGTCAAAGAGGGACTaGTCGTCGCTCACCACCGAC +
Preference number: 4 (lower is better)
Translates to: ILCHTEPRVLTRNCFGHKESKRD*SSLTTD
Trigger: GTCGGTGGTGAGCGACGACCAGTCCCTCTTTGACTC...TTTATGACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp TGTTACACGCATTTCCAAAGCATTAAAGATCTAAATGGATTATCTTTTCCCTGCCAGTCATGTCGGCCTTaGGGAGATGGGCTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: CYTHFQSIKDLNGLSFPCQSCRP*GDGLPL
Trigger: GAGCGGCAGCCCATCTCCCCAAGGCCGACATGACTG...GCAGGGAAAAGATAATCCATTTAGATCTTTAATGCTTTGGAAATGCGTGTAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp CTTCTGCTGTACTGCAGTAGGTACATTCGAAAAATTCTTGATAGTGCAAGAAGTCCACTCCTGCTGTGGTaGGAGGGGGTTGATCTTGTG +
Preference number: 4 (lower is better)
Translates to: LLLYCSRYIRKILDSARSPLLLW*EGVDLV
Trigger: CACAAGATCAACCCCCTCCCACCACAGCAGGAGTGG...ACTTCTTGCACTATCAAGAATTTTTCGAATGTACCTACTGCAGTACAGCAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp TTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGCCACTCCTGCTGTGGTaGGAGGGGGTTGATCTTGTG +
Preference number: 4 (lower is better)
Translates to: FFPSNSSWVKTSLALQSMPLLLW*EGVDLV
Trigger: CACAAGATCAACCCCCTCCCACCACAGCAGGAGTGG...CATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp AAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCGACGTTGACCCTCACTaGCTGATTGATCCACTCCTG +
Preference number: 4 (lower is better)
Translates to: KLHWPYNQCSSCHPLNLVDVDPH*LIDPLL
Trigger: CAGGAGTGGATCAATCAGCCAGTGAGGGTCAACGTC...GACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp TTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTGTAGTTCATGGGGTTaGACTCGCCTCCGCCCACCA +
Preference number: 4 (lower is better)
Translates to: FFPSNSSWVKTSLALQSMCSSWG*TRLRPP
Trigger: TGGTGGGCGGAGGCGAGTCCAACCCCATGAACTACA...CATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp TTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGCTCTCCTCTCGTTGGTaGTCATGTTGGGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: FFPSNSSWVKTSLALQSMLSSRW*SCWEEG
Trigger: CCCCTCCTCCCAACATGACCACCAACGAGAGGAGAG...CATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp GATGCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATAGCTGTACTCCTTTATaGCCCACTCCAGCCATTGCC +
Preference number: 4 (lower is better)
Translates to: DARRLRIQTGILAHGIIHSCTPL*PTPAIA
Trigger: GGCAATGGCTGGAGTGGGCCATAAAGGAGTACAGCT...ATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp ATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTCATAAATGTTGTAGAGGGTGGTaGCGCGGAGGAAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ILCHTEPRVLTRNCFGHKCCRGW*RGGSPP
Trigger: AGGAGGACTTCCTCCGCGCCACCACCCTCTACAACA...TTTATGACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp CTTGGCGTCTTAAACACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAGATCTGATACGGATCTaGCTGGGGCCGTTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LGVLNTQTFFPSNSSWVKDLIRI*LGPLLC
Trigger: ACAGAGCAACGGCCCCAGCCAGATCCGTATCAGATC...TTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTGTTTAAGACGCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp AAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGGGTACTTGTACATaGACGACTCGGTCGGATGTG +
Preference number: 4 (lower is better)
Translates to: KRTALANLLEFRNPYNFSKGTCT*TTRSDV
Trigger: CACATCCGACCGAGTCGTCCATGTACAAGTACCCTT...GGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp GACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCTCACAGACCAGTCTaGATAGACCAGCTCGCTTTG +
Preference number: 4 (lower is better)
Translates to: DKRTALANLLEFRNPYNFSHRPV*IDQLAL
Trigger: CAAAGCGAGCTGGTCTATCCAGACTGGTCTGTGAGA...AAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp GTCCTTACATACAGGTTTATCCATGGCCTTAGCTGCTGTTTTATAAAACCCTTTTGGAGTGGCAGAAGGTaGCCGTCTGGGTCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: VLTYRFIHGLSCCFIKPFWSGRR*PSGSEV
Trigger: CACTTCAGACCCAGACGGCCACCTTCTGCCACTCCA...AAAGGGTTTTATAAAACAGCAGCTAAGGCCATGGATAAACCTGTATGTAAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp CACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGTATTCTTTGCTGGAGTaGCAGAAGGTGGCCGTCTGG +
Preference number: 4 (lower is better)
Translates to: HLRICLSLEIPTTFPSSGYSLLE*QKVAVW
Trigger: CCAGACGGCCACCTTCTGCCACTCCAGCAAAGAATA...CCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp TCCATGATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTCAATATTCCACACATTaGCCCGGTTACAGCCTGACC +
Preference number: 4 (lower is better)
Translates to: SMILCHTEPRVLTRNCFGQYSTH*PGYSLT
Trigger: GGTCAGGCTGTAACCGGGTCAATGTGTGGAATATTG...ACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAATCATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp GATGCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATGAGGTAACTGAGGTGTaGCAACAGCACTTCCGTGTT +
Preference number: 4 (lower is better)
Translates to: DARRLRIQTGILAHGIIHEVTEV*QQHFRV
Trigger: AACACGGAAGTGCTGTTGTCACACCTCAGTTACCTC...ATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp ACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTTTTGACACTCAATCGTaGGGATTGGTCGGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: TSAQHLRICLSLEIPTTFFDTQS*GLVGVG
Trigger: TCCCACACCGACCAATCCTCACGATTGAGTGTCAAA...AAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp GACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTAGCTCCTCTTCTGACTaGGTCATAAGAAGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: DKRTALANLLEFRNPYNFSSSSD*VIRRVF
Trigger: GAAGACCCTTCTTATGACTCAGTCAGAAGAGGAGCT...AAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp GCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCAGCTCCTCTTCTGACTaGGTCATAAGAAGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: ARRLRIQTGILAHGIIHLSSSSD*VIRRVF
Trigger: GAAGACCCTTCTTATGACTCAGTCAGAAGAGGAGCT...GAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp TGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTAAAACCCAAGCTCCTCTTCTaGCTGAGTCATAAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: WPYNQCSSCHPLNLVLLKPKLLF*LSHKKG
Trigger: ACCCTTCTTATGACTCAGTCAGAAGAGGAGCTTGGG...TTTTAGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp AAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCCCAAGCTCCTCTTCTaGCTGAGTCATAAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: KLHWPYNQCSSCHPLNLVPKLLF*LSHKKG
Trigger: ACCCTTCTTATGACTCAGTCAGAAGAGGAGCTTGGG...GACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp TCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTGGGGAGGACTTTTGTTaGGGCCAGAATTCATGTTAT +
Preference number: 4 (lower is better)
Translates to: SLALQSMFQLPSTEFGPPGEDFC*GQNSCY
Trigger: ATAACATGAATTCTGGCCTCAACAAAAGTCCTCCCC...AGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp AAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCGCTCTGTATTCTTACTaGTCGTTTGTGCCCCTCCAA +
Preference number: 4 (lower is better)
Translates to: KRTALANLLEFRNPYNFSALYSY*SFVPLQ
Trigger: TTGGAGGGGCACAAACGATCAGTAAGAATACAGAGC...GGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp CTGACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTGACGGGTTAAGTCCATaGTTCTGTGTCATACTGAAC +
Preference number: 4 (lower is better)
Translates to: LTSAQHLRICLSLEIPTTDGLSP*FCVILN
Trigger: GTTCAGTATGACACAGAATCATGGACTTAACCCGTC...AGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp TCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTCAAATTCCAGTTGGGTaGAAACTTCACTGGCCTTAC +
Preference number: 4 (lower is better)
Translates to: SLALQSMFQLPSTEFGPPQIPVG*KLHWPY
Trigger: GTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTG...AGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp CTTGGCGTCTTAAACACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAGTGCATACTGTCCACTaGGAGGGATTCTGCAATGCC +
Preference number: 4 (lower is better)
Translates to: LGVLNTQTFFPSNSSWVKVHTVH*EGFCNA
Trigger: GGCATTGCAGAATCCCTCTCAGTGGACAGTATGCAC...TTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTGTTTAAGACGCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp ATATGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTGTAAAACTGCTTTTGTaGCCGAGGTCAACTCGTTTA +
Preference number: 4 (lower is better)
Translates to: ICPVESKASSKCAGWASAVKLLL*PRSTRL
Trigger: TAAACGAGTTGACCTCGGTCACAAAAGCAGTTTTAC...AGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp CTTCTGCTGTACTGCAGTAGGTACATTCGAAAAATTCTTGATAGTGCAAGAAGTCCAGGGAAAACCCTTTaGCCTAACGGGGGCGGTAAA +
Preference number: 4 (lower is better)
Translates to: LLLYCSRYIRKILDSARSPGKTL*PNGGGK
Trigger: TTTACCGCCCCCGTTAGGTCAAAGGGTTTTCCCTGG...ACTTCTTGCACTATCAAGAATTTTTCGAATGTACCTACTGCAGTACAGCAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp TCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAGGGCTCAGCAGTGGATaGCCCAGAGAAAGAATTCCT +
Preference number: 4 (lower is better)
Translates to: SIKFQLGENFTGLTINVPGLSSG*PRERIP
Trigger: AGGAATTCTTTCTCTGGGTCATCCACTGCTGAGCCC...TGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534087.3
CDS-3UTR GCA 90 bp CTTCTGCTGTACTGCAGTAGGTACATTCGAAAAATTCTTGATAGTGCAAGAAGTGCCCTCACTCCCCTGTaGACGTTTGTTGTTGTAGCG +
Preference number: 4 (lower is better)
Translates to: LLLYCSRYIRKILDSARSALTPL*TFVVVA
Trigger: CGCTACAACAACAAACGTGCACAGGGGAGTGAGGGC...ACTTCTTGCACTATCAAGAATTTTTCGAATGTACCTACTGCAGTACAGCAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281428.12
ENST00000527786.7
CDS-3UTR GCA 90 bp GCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCCCCAGCATAAAAGGCTaGTCTTTAATGAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: ARRLRIQTGILAHGIIHLPSIKG*SLMRQL
Trigger: CAGCTGCCTCATTAAAGAGCAGCCTTTTATGCTGGG...GAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281428.12
ENST00000429175.7
CDS-3UTR GCA 90 bp AAACTGGAGACAAATGTTCCGAAACACATCCCATTTCATTTAGGTAGACATGTTGCCCACTCCAGCCATTaGCTCACATGCTCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: KLETNVPKHIPFHLGRHVAHSSH*LTCSCV
Trigger: GACACAGGAGCATGTGAGGCAATGGCTGGAGTGGGC...AACATGTCTACCTAAATGAAATGGGATGTGTTTCGGAACATTTGTCTCCAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281428.12
ENST00000527786.7
ENST00000534087.3
CDS-3UTR GCA 90 bp TCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCACTTACTGATCGTTTGTaGCCCTCCAAGGGGAGGACT +
Preference number: 4 (lower is better)
Translates to: SIKFQLGENFTGLTINVPLTDRL*PSKGRT
Trigger: AGTCCTCCCCTTGGAGGGGCACAAACGATCAGTAAG...TGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp ACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTTCTGGCTGGGGCCGTTaGTCTGTATTCTTACTGATC +
Preference number: 4 (lower is better)
Translates to: TSAQHLRICLSLEIPTTFSGWGR*SVFLLI
Trigger: GATCAGTAAGAATACAGAGCAACGGCCCCAGCCAGA...AAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp CACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTTCTGGCTGGGGCCGTTaGTCTGTATTCTTACTGATC +
Preference number: 4 (lower is better)
Translates to: HTNLLSIKFQLGENFTGLSGWGR*SVFLLI
Trigger: GATCAGTAAGAATACAGAGCAACGGCCCCAGCCAGA...AAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp CACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGGCAGAGCCTGGGCAATaGCGTGGAAGTCAAATTTGT +
Preference number: 4 (lower is better)
Translates to: HLRICLSLEIPTTFPSSGAEPGQ*RGSQIC
Trigger: ACAAATTTGACTTCCACGGCATTGCCCAGGCTCTGC...CCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp TGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTAAAAGCAGAGCCTGGGCAATaGCGTGGAAGTCAAATTTGT +
Preference number: 4 (lower is better)
Translates to: WPYNQCSSCHPLNLVLLKAEPGQ*RGSQIC
Trigger: ACAAATTTGACTTCCACGGCATTGCCCAGGCTCTGC...TTTTAGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp CACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTGCAGAGCCTGGGCAATaGCGTGGAAGTCAAATTTGT +
Preference number: 4 (lower is better)
Translates to: HTNLLSIKFQLGENFTGLAEPGQ*RGSQIC
Trigger: ACAAATTTGACTTCCACGGCATTGCCCAGGCTCTGC...AAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp GACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTAGAGGGATTCTGCAATaGCCTTGGCGTCTTAAACAC +
Preference number: 4 (lower is better)
Translates to: DKRTALANLLEFRNPYNFRGILQ*PWRLKH
Trigger: GTGTTTAAGACGCCAAGGGCATTGCAGAATCCCTCT...AAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp ACAGTAAGTTGCCTTCTGATTGGTTGGCCCTGGTCTGATGGTCTGACAAGCGCAGGATTATCTTTTCCCTaGTTGTGTATGCCTGTTAAA +
Preference number: 4 (lower is better)
Translates to: TVSCLLIGWPWSDGLTSAGLSFP*LCMPVK
Trigger: TTTAACAGGCATACACAAGCAGGGAAAAGATAATCC...TGCGCTTGTCAGACCATCAGACCAGGGCCAACCAATCAGAAGGCAACTTACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp CTGATACGGATCTGGCTGGGGCCGTTGCTCTGTATTCTTACTGATCGTTTGTGCGGATTATCTTTTCCCTaGTTGTGTATGCCTGTTAAA +
Preference number: 4 (lower is better)
Translates to: LIRIWLGPLLCILTDRLCGLSFP*LCMPVK
Trigger: TTTAACAGGCATACACAAGCAGGGAAAAGATAATCC...GCACAAACGATCAGTAAGAATACAGAGCAACGGCCCCAGCCAGATCCGTATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
CDS-3UTR GCA 90 bp TGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTAGATACCTTCTGCTGTACTaGAGTAGGTACATTCGAAAA +
Preference number: 4 (lower is better)
Translates to: CPVESKASSKCAGWASARYLLLY*SRYIRK
Trigger: TTTTCGAATGTACCTACTGCAGTACAGCAGAAGGTA...TCTAGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR GCA 90 bp TCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAGTGCCCAGGGGAGGCTaGAGAGTTAAATCTCACAGA +
Preference number: 4 (lower is better)
Translates to: SIKFQLGENFTGLTINVPVPRGG*RVKSHR
Trigger: TCTGTGAGATTTAACTCTGCAGCCTCCCCTGGGCAC...TGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp CTTCTGCTGTACTGCAGTAGGTACATTCGAAAAATTCTTGATAGTGCAAGAAGTATAGTCCCGTCCATTTaGCCAAGTCTGCAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: LLLYCSRYIRKILDSARSIVPSI*PSLQPS
Trigger: GCTCGGCTGCAGACTTGGCCAAATGGACGGGACTAT...ACTTCTTGCACTATCAAGAATTTTTCGAATGTACCTACTGCAGTACAGCAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281428.12
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp AAACTGGAGACAAATGTTCCGAAACACATCCCATTTCATTTAGGTAGACATGTTCCACTCCTGCTGTGGTaGGAGGGGGTTGATCTTGTG +
Preference number: 4 (lower is better)
Translates to: KLETNVPKHIPFHLGRHVPLLLW*EGVDLV
Trigger: CACAAGATCAACCCCCTCCCACCACAGCAGGAGTGG...AACATGTCTACCTAAATGAAATGGGATGTGTTTCGGAACATTTGTCTCCAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp TTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGGATCCACTCCTGCTGTaGTGGGAGGGGGTTGATCTT +
Preference number: 4 (lower is better)
Translates to: FFPSNSSWVKTSLALQSMDPLLL*WEGVDL
Trigger: AAGATCAACCCCCTCCCACCACAGCAGGAGTGGATC...CATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp ACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCTGGATCCATTCATGTaGTCATACTCCCGCTTGACG +
Preference number: 4 (lower is better)
Translates to: TSAQHLRICLSLEIPTTFLDPFM*SYSRLT
Trigger: CGTCAAGCGGGAGTATGACCACATGAATGGATCCAG...AAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp GATGCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTGGATCCATTCATGTaGTCATACTCCCGCTTGACG +
Preference number: 4 (lower is better)
Translates to: DARRLRIQTGILAHGIIHLDPFM*SYSRLT
Trigger: CGTCAAGCGGGAGTATGACCACATGAATGGATCCAG...ATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp TTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGACCCTCAATCGTGAGGATTaGTCGGTGTGGGAGGTTGTA +
Preference number: 4 (lower is better)
Translates to: LRICLSLEIPTTFPSSGTLNRED*SVWEVV
Trigger: TACAACCTCCCACACCGACCAATCCTCACGATTGAG...GGTCCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp CACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTCTCAATCGTGAGGATTaGTCGGTGTGGGAGGTTGTA +
Preference number: 4 (lower is better)
Translates to: HTNLLSIKFQLGENFTGLLNRED*SVWEVV
Trigger: TACAACCTCCCACACCGACCAATCCTCACGATTGAG...AAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp CTTCTGCTGTACTGCAGTAGGTACATTCGAAAAATTCTTGATAGTGCAAGAAGTGATCTGATACGGATCTaGCTGGGGCCGTTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LLLYCSRYIRKILDSARSDLIRI*LGPLLC
Trigger: ACAGAGCAACGGCCCCAGCCAGATCCGTATCAGATC...ACTTCTTGCACTATCAAGAATTTTTCGAATGTACCTACTGCAGTACAGCAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp TCCATGATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTAAGGGTACTTGTACATaGACGACTCGGTCGGATGTG +
Preference number: 4 (lower is better)
Translates to: SMILCHTEPRVLTRNCFGKGTCT*TTRSDV
Trigger: CACATCCGACCGAGTCGTCCATGTACAAGTACCCTT...ACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAATCATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp TGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTAGATTCAAACTGGCATACTaGCCCATGGAATTATTCATC +
Preference number: 4 (lower is better)
Translates to: CPVESKASSKCAGWASARFKLAY*PMELFI
Trigger: GATGAATAATTCCATGGGCCAGTATGCCAGTTTGAA...TCTAGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp TCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTCCATCAAATTCCAGTTaGGTGAAAACTTCACTGGCC +
Preference number: 4 (lower is better)
Translates to: SLALQSMFQLPSTEFGPPPSNSS*VKTSLA
Trigger: GGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGG...AGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp TTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGACCTCTCACAGACCAGTCTaGATAGACCAGCTCGCTTTG +
Preference number: 4 (lower is better)
Translates to: LRICLSLEIPTTFPSSGTSHRPV*IDQLAL
Trigger: CAAAGCGAGCTGGTCTATCCAGACTGGTCTGTGAGA...GGTCCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp CACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTCTGTCTGAAACATCGTaGGTAGCTAAGGGTCGGGAA +
Preference number: 4 (lower is better)
Translates to: HTNLLSIKFQLGENFTGLLSETS*VAKGRE
Trigger: TTCCCGACCCTTAGCTACCCACGATGTTTCAGACAG...AAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344954.10
ENST00000608303.5
CDS-3UTR TCA 90 bp CTTCTGCTGTACTGCAGTAGGTACATTCGAAAAATTCTTGATAGTGCAAGAAGTTTGACCCTCACTGGCTaGTTGATCCACTCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LLLYCSRYIRKILDSARSLTLTG*LIHSCC
Trigger: ACAGCAGGAGTGGATCAATCAGCCAGTGAGGGTCAA...ACTTCTTGCACTATCAAGAATTTTTCGAATGTACCTACTGCAGTACAGCAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp GCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCATTATAGGCCAGCAGTaGACTTTCCCTGAGGTAACT +
Preference number: 4 (lower is better)
Translates to: ARRLRIQTGILAHGIIHLIIGQQ*TFPEVT
Trigger: AGTTACCTCAGGGAAAGTTCACTGCTGGCCTATAAT...GAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp CTTGGCGTCTTAAACACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAATTTGACACTCAATCGTaGGGATTGGTCGGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: LGVLNTQTFFPSNSSWVKFDTQS*GLVGVG
Trigger: TCCCACACCGACCAATCCTCACGATTGAGTGTCAAA...TTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTGTTTAAGACGCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp CTGACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTAAGAAGGGTCTTCTTTaGCACTCAATCGTGAGGATT +
Preference number: 4 (lower is better)
Translates to: LTSAQHLRICLSLEIPTTKKGLL*HSIVRI
Trigger: AATCCTCACGATTGAGTGTCAAAGAAGACCCTTCTT...AGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp TCCATGATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTAGCTCCTCTTCTGACTaGGTCATAAGAAGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: SMILCHTEPRVLTRNCFGSSSSD*VIRRVF
Trigger: GAAGACCCTTCTTATGACTCAGTCAGAAGAGGAGCT...ACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAATCATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp TCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCACCCAAGCTCCTCTTCTaGCTGAGTCATAAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: SIKFQLGENFTGLTINVPPKLLF*LSHKKG
Trigger: ACCCTTCTTATGACTCAGTCAGAAGAGGAGCTTGGG...TGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp GCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCGGGGAGGACTTTTGTTaGGGCCAGAATTCATGTTAT +
Preference number: 4 (lower is better)
Translates to: ARRLRIQTGILAHGIIHLGEDFC*GQNSCY
Trigger: ATAACATGAATTCTGGCCTCAACAAAAGTCCTCCCC...GAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp CACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGGCTCTGTATTCTTACTaGTCGTTTGTGCCCCTCCAA +
Preference number: 4 (lower is better)
Translates to: HLRICLSLEIPTTFPSSGALYSY*SFVPLQ
Trigger: TTGGAGGGGCACAAACGATCAGTAAGAATACAGAGC...CCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp ATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTCATAAAGGAGGTCCAGTATTGTaGTGCGGCTCCAAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: ILCHTEPRVLTRNCFGHKGGPVL*CGSKEA
Trigger: AGCTTCTTTGGAGCCGCATCACAATACTGGACCTCC...TTTATGACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp AAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTGAACCCCGTGTATTaGCAAGAAACTGCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: KLHWPYNQCSSCHPLNLVLNPVY*QETALV
Trigger: GACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAG...GACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp AAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCGATTCTGTGTCATACTaGACCCCGTGTATTGACAAG +
Preference number: 4 (lower is better)
Translates to: KRTALANLLEFRNPYNFSDSVSY*TPCIDK
Trigger: CTTGTCAATACACGGGGTTCAGTATGACACAGAATC...GGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp AAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCCAAATTCCAGTTGGGTaGAAACTTCACTGGCCTTAC +
Preference number: 4 (lower is better)
Translates to: KRTALANLLEFRNPYNFSQIPVG*KLHWPY
Trigger: GTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTG...GGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp GCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCCAAATTCCAGTTGGGTaGAAACTTCACTGGCCTTAC +
Preference number: 4 (lower is better)
Translates to: ARRLRIQTGILAHGIIHLQIPVG*KLHWPY
Trigger: GTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTG...GAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp CACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTCCCAGCATAAAAGGCTaGTCTTTAATGAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: HTNLLSIKFQLGENFTGLPSIKG*SLMRQL
Trigger: CAGCTGCCTCATTAAAGAGCAGCCTTTTATGCTGGG...AAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281428.12
ENST00000429175.7
CDS-3UTR GCA 90 bp GTCCTTACATACAGGTTTATCCATGGCCTTAGCTGCTGTTTTATAAAACCCTTTAGCCATTGCCTCACATaGTCCTGTGTCCACAGTGTG +
Preference number: 4 (lower is better)
Translates to: VLTYRFIHGLSCCFIKPFSHCLT*SCVHSV
Trigger: CACACTGTGGACACAGGAGCATGTGAGGCAATGGCT...AAAGGGTTTTATAAAACAGCAGCTAAGGCCATGGATAAACCTGTATGTAAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281428.12
ENST00000527786.7
ENST00000534087.3
CDS-3UTR GCA 90 bp GTCCTTACATACAGGTTTATCCATGGCCTTAGCTGCTGTTTTATAAAACCCTTTCTTACTGATCGTTTGTaGCCCTCCAAGGGGAGGACT +
Preference number: 4 (lower is better)
Translates to: VLTYRFIHGLSCCFIKPFLTDRL*PSKGRT
Trigger: AGTCCTCCCCTTGGAGGGGCACAAACGATCAGTAAG...AAAGGGTTTTATAAAACAGCAGCTAAGGCCATGGATAAACCTGTATGTAAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR GCA 90 bp TGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTAAAAAGAGGGATTCTGCAATaGCCTTGGCGTCTTAAACAC +
Preference number: 4 (lower is better)
Translates to: WPYNQCSSCHPLNLVLLKRGILQ*PWRLKH
Trigger: GTGTTTAAGACGCCAAGGGCATTGCAGAATCCCTCT...TTTTAGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp AAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCAGAGGGATTCTGCAATaGCCTTGGCGTCTTAAACAC +
Preference number: 4 (lower is better)
Translates to: KLHWPYNQCSSCHPLNLVRGILQ*PWRLKH
Trigger: GTGTTTAAGACGCCAAGGGCATTGCAGAATCCCTCT...GACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp GTCCTTACATACAGGTTTATCCATGGCCTTAGCTGCTGTTTTATAAAACCCTTTGAGTGGTCAGCTGAGTaGATACTGTCCACTGAGAGG +
Preference number: 4 (lower is better)
Translates to: VLTYRFIHGLSCCFIKPFEWSAE*ILSTER
Trigger: CCTCTCAGTGGACAGTATGCACTCAGCTGACCACTC...AAAGGGTTTTATAAAACAGCAGCTAAGGCCATGGATAAACCTGTATGTAAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR GCA 90 bp AAGTGTGCAGGATGGGCTTCAGCTAGAAGGCCACTGATGAGTAAGCTTCTAGTAATTTATACAGTAAGTTaGCTTCTGATTGGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: KCAGWASARRPLMSKLLVIYTVS*LLIGWP
Trigger: GGGCCAACCAATCAGAAGGCAACTTACTGTATAAAT...TACTAGAAGCTTACTCATCAGTGGCCTTCTAGCTGAAGCCCATCCTGCACACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
CDS-3UTR GCA 90 bp TGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTAGAATCCATGGCCTTAGCTaGTGTTTTATAAAACCCTTT +
Preference number: 4 (lower is better)
Translates to: CPVESKASSKCAGWASARIHGLS*CFIKPF
Trigger: AAAGGGTTTTATAAAACAGCAGCTAAGGCCATGGAT...TCTAGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp AAACTGGAGACAAATGTTCCGAAACACATCCCATTTCATTTAGGTAGACATGTTGATCCACTCCTGCTGTaGTGGGAGGGGGTTGATCTT +
Preference number: 4 (lower is better)
Translates to: KLETNVPKHIPFHLGRHVDPLLL*WEGVDL
Trigger: AAGATCAACCCCCTCCCACCACAGCAGGAGTGGATC...AACATGTCTACCTAAATGAAATGGGATGTGTTTCGGAACATTTGTCTCCAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp CTTCTGCTGTACTGCAGTAGGTACATTCGAAAAATTCTTGATAGTGCAAGAAGTGACGTTGACCCTCACTaGCTGATTGATCCACTCCTG +
Preference number: 4 (lower is better)
Translates to: LLLYCSRYIRKILDSARSDVDPH*LIDPLL
Trigger: CAGGAGTGGATCAATCAGCCAGTGAGGGTCAACGTC...ACTTCTTGCACTATCAAGAATTTTTCGAATGTACCTACTGCAGTACAGCAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp TGTTACACGCATTTCCAAAGCATTAAAGATCTAAATGGATTATCTTTTCCCTGCTGTAGTTCATGGGGTTaGACTCGCCTCCGCCCACCA +
Preference number: 4 (lower is better)
Translates to: CYTHFQSIKDLNGLSFPCCSSWG*TRLRPP
Trigger: TGGTGGGCGGAGGCGAGTCCAACCCCATGAACTACA...GCAGGGAAAAGATAATCCATTTAGATCTTTAATGCTTTGGAAATGCGTGTAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp AGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTCCATCAAATTCCAGTTaGGTGAAAACTTCACTGGCC +
Preference number: 4 (lower is better)
Translates to: SWVKTSLALQSMFQLPSTPSNSS*VKTSLA
Trigger: GGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGG...AGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp GACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTCCATCAAATTCCAGTTaGGTGAAAACTTCACTGGCC +
Preference number: 4 (lower is better)
Translates to: DKRTALANLLEFRNPYNFPSNSS*VKTSLA
Trigger: GGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGG...AAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp TTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGGAGGGGGCTCAGCAGTaGATGACCCAGAGAAAGAAT +
Preference number: 4 (lower is better)
Translates to: FFPSNSSWVKTSLALQSMEGAQQ*MTQRKN
Trigger: ATTCTTTCTCTGGGTCATCCACTGCTGAGCCCCCTC...CATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534087.3
3UTR CAA 72 bp GATGGTCTGACAAGCGCACAGCACTTGCGAATCTGCTaGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: DGLTSAQHLRIC*SLEIPTTFPSS
Trigger: AGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAGACCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp ATCCAGTTTTGTCTTCCCTTCAAGGCCACATATGTCCTGTTGAGTCCAAAGCATAAGAAGGGTCTTCTTTaGCACTCAATCGTGAGGATT +
Preference number: 4 (lower is better)
Translates to: IQFCLPFKATYVLLSPKHKKGLL*HSIVRI
Trigger: AATCCTCACGATTGAGTGTCAAAGAAGACCCTTCTT...ATGCTTTGGACTCAACAGGACATATGTGGCCTTGAAGGGAAGACAAAACTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp CTTGGCGTCTTAAACACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAAGCTCCTCTTCTGACTaGGTCATAAGAAGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: LGVLNTQTFFPSNSSWVKSSSSD*VIRRVF
Trigger: GAAGACCCTTCTTATGACTCAGTCAGAAGAGGAGCT...TTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTGTTTAAGACGCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp ACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCTTTGTTCACCCAAGCTCCTCTTCTaGCTGAGTCATAAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: TENSNWHTGPWNYSSLCSPKLLF*LSHKKG
Trigger: ACCCTTCTTATGACTCAGTCAGAAGAGGAGCTTGGG...TGAACAAAGAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp TCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAGCTCTGTATTCTTACTaGTCGTTTGTGCCCCTCCAA +
Preference number: 4 (lower is better)
Translates to: SIKFQLGENFTGLTINVPALYSY*SFVPLQ
Trigger: TTGGAGGGGCACAAACGATCAGTAAGAATACAGAGC...TGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp CTTGGCGTCTTAAACACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAACTGAACCCCGTGTATTaGCAAGAAACTGCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: LGVLNTQTFFPSNSSWVKLNPVY*QETALV
Trigger: GACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAG...TTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTGTTTAAGACGCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp ACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTGATTCTGTGTCATACTaGACCCCGTGTATTGACAAG +
Preference number: 4 (lower is better)
Translates to: TSAQHLRICLSLEIPTTFDSVSY*TPCIDK
Trigger: CTTGTCAATACACGGGGTTCAGTATGACACAGAATC...AAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp AAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCGATTCTGTGTCATACTaGACCCCGTGTATTGACAAG +
Preference number: 4 (lower is better)
Translates to: KLHWPYNQCSSCHPLNLVDSVSY*TPCIDK
Trigger: CTTGTCAATACACGGGGTTCAGTATGACACAGAATC...GACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp AAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCGACGGGTTAAGTCCATaGTTCTGTGTCATACTGAAC +
Preference number: 4 (lower is better)
Translates to: KLHWPYNQCSSCHPLNLVDGLSP*FCVILN
Trigger: GTTCAGTATGACACAGAATCATGGACTTAACCCGTC...GACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp TTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGACCGACGGGTTAAGTCCATaGTTCTGTGTCATACTGAAC +
Preference number: 4 (lower is better)
Translates to: LRICLSLEIPTTFPSSGTDGLSP*FCVILN
Trigger: GTTCAGTATGACACAGAATCATGGACTTAACCCGTC...GGTCCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp TGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTAAAACAAATTCCAGTTGGGTaGAAACTTCACTGGCCTTAC +
Preference number: 4 (lower is better)
Translates to: WPYNQCSSCHPLNLVLLKQIPVG*KLHWPY
Trigger: GTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTG...TTTTAGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp GCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCGTAAAACTGCTTTTGTaGCCGAGGTCAACTCGTTTA +
Preference number: 4 (lower is better)
Translates to: ARRLRIQTGILAHGIIHLVKLLL*PRSTRL
Trigger: TAAACGAGTTGACCTCGGTCACAAAAGCAGTTTTAC...GAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp AGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTAACTGTCCTCAGCACTaGGAGAAGGAACCATTTATT +
Preference number: 4 (lower is better)
Translates to: SWVKTSLALQSMFQLPSTNCPQH*EKEPFI
Trigger: AATAAATGGTTCCTTCTCTCAGTGCTGAGGACAGTT...AGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp ACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTATTATAGGCCAGCAGTaGACCTGGATCCATTCATGT +
Preference number: 4 (lower is better)
Translates to: TSAQHLRICLSLEIPTTFIIGQQ*TWIHSC
Trigger: ACATGAATGGATCCAGGTTCACTGCTGGCCTATAAT...AAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344954.10
ENST00000608303.5
CDS-3UTR GCA 90 bp ATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTCATAAAGAAGTGACTTCACTTTaGGAATCGGGGAGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: ILCHTEPRVLTRNCFGHKEVTSL*ESGRKS
Trigger: GGACTTCCTCCCCGATTCGCAAAGTGAAGTCACTTC...TTTATGACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281428.12
CDS-3UTR GCA 90 bp TCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAAGAGGGATTCTGCAATaGCCTTGGCGTCTTAAACAC +
Preference number: 4 (lower is better)
Translates to: SIKFQLGENFTGLTINVPRGILQ*PWRLKH
Trigger: GTGTTTAAGACGCCAAGGGCATTGCAGAATCCCTCT...TGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp CTTGGCGTCTTAAACACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAAGAGGGATTCTGCAATaGCCTTGGCGTCTTAAACAC +
Preference number: 4 (lower is better)
Translates to: LGVLNTQTFFPSNSSWVKRGILQ*PWRLKH
Trigger: GTGTTTAAGACGCCAAGGGCATTGCAGAATCCCTCT...TTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTGTTTAAGACGCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp GACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTCAGCACTTGCGAATCTaGTTGAGTTTAGAAATCCCT +
Preference number: 4 (lower is better)
Translates to: DKRTALANLLEFRNPYNFQHLRI*LSLEIP
Trigger: AGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTG...AAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp ATCCAGTTTTGTCTTCCCTTCAAGGCCACATATGTCCTGTTGAGTCCAAAGCATCAGCACTTGCGAATCTaGTTGAGTTTAGAAATCCCT +
Preference number: 4 (lower is better)
Translates to: IQFCLPFKATYVLLSPKHQHLRI*LSLEIP
Trigger: AGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTG...ATGCTTTGGACTCAACAGGACATATGTGGCCTTGAAGGGAAGACAAAACTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp CTGACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTCCCTGCTTGTGTATaGCTGTTAAATAACTGTACC +
Preference number: 4 (lower is better)
Translates to: LTSAQHLRICLSLEIPTTFPACV*LLNNCT
Trigger: GGTACAGTTATTTAACAGGCATACACAAGCAGGGAA...AGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp CTGACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTCAGAGCTGTGATTATTaGAGTACTGTTACACGCATT +
Preference number: 4 (lower is better)
Translates to: LTSAQHLRICLSLEIPTTQSCDY*STVTRI
Trigger: AATGCGTGTAACAGTACTGCAATAATCACAGCTCTG...AGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp TCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTTACCTTCTGCTGTACTaGAGTAGGTACATTCGAAAA +
Preference number: 4 (lower is better)
Translates to: SLALQSMFQLPSTEFGPPYLLLY*SRYIRK
Trigger: TTTTCGAATGTACCTACTGCAGTACAGCAGAAGGTA...AGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp GTCCTTACATACAGGTTTATCCATGGCCTTAGCTGCTGTTTTATAAAACCCTTTCTGGATCCATTCATGTaGTCATACTCCCGCTTGACG +
Preference number: 4 (lower is better)
Translates to: VLTYRFIHGLSCCFIKPFLDPFM*SYSRLT
Trigger: CGTCAAGCGGGAGTATGACCACATGAATGGATCCAG...AAAGGGTTTTATAAAACAGCAGCTAAGGCCATGGATAAACCTGTATGTAAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp ACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCTTTGTTCACTGGATCCATTCATGTaGTCATACTCCCGCTTGACG +
Preference number: 4 (lower is better)
Translates to: TENSNWHTGPWNYSSLCSLDPFM*SYSRLT
Trigger: CGTCAAGCGGGAGTATGACCACATGAATGGATCCAG...TGAACAAAGAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp ATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTCATAAACTGGATCCATTCATGTaGTCATACTCCCGCTTGACG +
Preference number: 4 (lower is better)
Translates to: ILCHTEPRVLTRNCFGHKLDPFM*SYSRLT
Trigger: CGTCAAGCGGGAGTATGACCACATGAATGGATCCAG...TTTATGACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp AGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTTTGCCATCCATGTTCTaGAAAAAGGATGTGTCGATC +
Preference number: 4 (lower is better)
Translates to: SWVKTSLALQSMFQLPSTLPSMF*KKDVSI
Trigger: GATCGACACATCCTTTTTCCAGAACATGGATGGCAA...AGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp ACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCTTTGTTCACTCAATCGTGAGGATTaGTCGGTGTGGGAGGTTGTA +
Preference number: 4 (lower is better)
Translates to: TENSNWHTGPWNYSSLCSLNRED*SVWEVV
Trigger: TACAACCTCCCACACCGACCAATCCTCACGATTGAG...TGAACAAAGAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp ATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTCATAAAAAGGGTACTTGTACATaGACGACTCGGTCGGATGTG +
Preference number: 4 (lower is better)
Translates to: ILCHTEPRVLTRNCFGHKKGTCT*TTRSDV
Trigger: CACATCCGACCGAGTCGTCCATGTACAAGTACCCTT...TTTATGACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp TCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTTGGCATACTGGCCCATaGAATTATTCATCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: SLALQSMFQLPSTEFGPPWHTGP*NYSSLC
Trigger: ACAAAGAGATGAATAATTCCATGGGCCAGTATGCCA...AGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp AGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTACTGAGAATTCAAACTaGCATACTGGCCCATGGAAT +
Preference number: 4 (lower is better)
Translates to: SWVKTSLALQSMFQLPSTTENSN*HTGPWN
Trigger: ATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGT...AGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp AAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCACTGAGAATTCAAACTaGCATACTGGCCCATGGAAT +
Preference number: 4 (lower is better)
Translates to: KRTALANLLEFRNPYNFSTENSN*HTGPWN
Trigger: ATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGT...GGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp GATGCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCCATCAAATTCCAGTTaGGTGAAAACTTCACTGGCC +
Preference number: 4 (lower is better)
Translates to: DARRLRIQTGILAHGIIHPSNSS*VKTSLA
Trigger: GGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGG...ATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp ACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCATCAAATTCCAGTTaGGTGAAAACTTCACTGGCC +
Preference number: 4 (lower is better)
Translates to: TSAQHLRICLSLEIPTTFPSNSS*VKTSLA
Trigger: GGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGG...AAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp AAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCCATCAAATTCCAGTTaGGTGAAAACTTCACTGGCC +
Preference number: 4 (lower is better)
Translates to: KLHWPYNQCSSCHPLNLVPSNSS*VKTSLA
Trigger: GGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGG...GACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp ATCCAGTTTTGTCTTCCCTTCAAGGCCACATATGTCCTGTTGAGTCCAAAGCATATTCTGCAATGCCCTTaGCGTCTTAAACACACAAAC +
Preference number: 4 (lower is better)
Translates to: IQFCLPFKATYVLLSPKHILQCP*RLKHTN
Trigger: GTTTGTGTGTTTAAGACGCCAAGGGCATTGCAGAAT...ATGCTTTGGACTCAACAGGACATATGTGGCCTTGAAGGGAAGACAAAACTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp AAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCATTCTGCAATGCCCTTaGCGTCTTAAACACACAAAC +
Preference number: 4 (lower is better)
Translates to: KRTALANLLEFRNPYNFSILQCP*RLKHTN
Trigger: GTTTGTGTGTTTAAGACGCCAAGGGCATTGCAGAAT...GGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp ACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCTTTGTTCATCTCACAGACCAGTCTaGATAGACCAGCTCGCTTTG +
Preference number: 4 (lower is better)
Translates to: TENSNWHTGPWNYSSLCSSHRPV*IDQLAL
Trigger: CAAAGCGAGCTGGTCTATCCAGACTGGTCTGTGAGA...TGAACAAAGAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp AAACTGGAGACAAATGTTCCGAAACACATCCCATTTCATTTAGGTAGACATGTTTATTCTTTGCTGGAGTaGCAGAAGGTGGCCGTCTGG +
Preference number: 4 (lower is better)
Translates to: KLETNVPKHIPFHLGRHVYSLLE*QKVAVW
Trigger: CCAGACGGCCACCTTCTGCCACTCCAGCAAAGAATA...AACATGTCTACCTAAATGAAATGGGATGTGTTTCGGAACATTTGTCTCCAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp TGTTACACGCATTTCCAAAGCATTAAAGATCTAAATGGATTATCTTTTCCCTGCGCGCTTATTCTTTGCTaGAGTGGCAGAAGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: CYTHFQSIKDLNGLSFPCALILC*SGRRWP
Trigger: CGGCCACCTTCTGCCACTCCAGCAAAGAATAAGCGC...GCAGGGAAAAGATAATCCATTTAGATCTTTAATGCTTTGGAAATGCGTGTAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp CTTGGCGTCTTAAACACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAATTATAGGCCAGCAGTaGACTTTCCCTGAGGTAACT +
Preference number: 4 (lower is better)
Translates to: LGVLNTQTFFPSNSSWVKIIGQQ*TFPEVT
Trigger: AGTTACCTCAGGGAAAGTTCACTGCTGGCCTATAAT...TTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTGTTTAAGACGCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp TCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAATTATAGGCCAGCAGTaGACTTTCCCTGAGGTAACT +
Preference number: 4 (lower is better)
Translates to: SIKFQLGENFTGLTINVPIIGQQ*TFPEVT
Trigger: AGTTACCTCAGGGAAAGTTCACTGCTGGCCTATAAT...TGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp TGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTAAAAAAGAAGGGTCTTCTTTaGCACTCAATCGTGAGGATT +
Preference number: 4 (lower is better)
Translates to: WPYNQCSSCHPLNLVLLKKKGLL*HSIVRI
Trigger: AATCCTCACGATTGAGTGTCAAAGAAGACCCTTCTT...TTTTAGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp TTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGACCAAGAAGGGTCTTCTTTaGCACTCAATCGTGAGGATT +
Preference number: 4 (lower is better)
Translates to: LRICLSLEIPTTFPSSGTKKGLL*HSIVRI
Trigger: AATCCTCACGATTGAGTGTCAAAGAAGACCCTTCTT...GGTCCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp CACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGAAGAAGGGTCTTCTTTaGCACTCAATCGTGAGGATT +
Preference number: 4 (lower is better)
Translates to: HLRICLSLEIPTTFPSSGKKGLL*HSIVRI
Trigger: AATCCTCACGATTGAGTGTCAAAGAAGACCCTTCTT...CCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp CTTCTGCTGTACTGCAGTAGGTACATTCGAAAAATTCTTGATAGTGCAAGAAGTAGCTCCTCTTCTGACTaGGTCATAAGAAGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: LLLYCSRYIRKILDSARSSSSSD*VIRRVF
Trigger: GAAGACCCTTCTTATGACTCAGTCAGAAGAGGAGCT...ACTTCTTGCACTATCAAGAATTTTTCGAATGTACCTACTGCAGTACAGCAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp CTTGGCGTCTTAAACACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAGGGGAGGACTTTTGTTaGGGCCAGAATTCATGTTAT +
Preference number: 4 (lower is better)
Translates to: LGVLNTQTFFPSNSSWVKGEDFC*GQNSCY
Trigger: ATAACATGAATTCTGGCCTCAACAAAAGTCCTCCCC...TTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTGTTTAAGACGCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp TGTTACACGCATTTCCAAAGCATTAAAGATCTAAATGGATTATCTTTTCCCTGCGGAGGTCCAGTATTGTaGTGCGGCTCCAAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: CYTHFQSIKDLNGLSFPCGGPVL*CGSKEA
Trigger: AGCTTCTTTGGAGCCGCATCACAATACTGGACCTCC...GCAGGGAAAAGATAATCCATTTAGATCTTTAATGCTTTGGAAATGCGTGTAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp GATGCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATAAGATGCTAGGAGACTaGGAATTCAAACTGGCATAC +
Preference number: 4 (lower is better)
Translates to: DARRLRIQTGILAHGIIHKMLGD*EFKLAY
Trigger: GTATGCCAGTTTGAATTCTCAGTCTCCTAGCATCTT...ATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp TTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGACCAAGATGCTAGGAGACTaGGAATTCAAACTGGCATAC +
Preference number: 4 (lower is better)
Translates to: LRICLSLEIPTTFPSSGTKMLGD*EFKLAY
Trigger: GTATGCCAGTTTGAATTCTCAGTCTCCTAGCATCTT...GGTCCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp TTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGCTGAACCCCGTGTATTaGCAAGAAACTGCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: FFPSNSSWVKTSLALQSMLNPVY*QETALV
Trigger: GACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAG...CATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp GTCCTTACATACAGGTTTATCCATGGCCTTAGCTGCTGTTTTATAAAACCCTTTCTGAACCCCGTGTATTaGCAAGAAACTGCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: VLTYRFIHGLSCCFIKPFLNPVY*QETALV
Trigger: GACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAG...AAAGGGTTTTATAAAACAGCAGCTAAGGCCATGGATAAACCTGTATGTAAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp TCCATGATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTTCTCAAACCAGAACATaGCGGGTTAAGTCCATGATT +
Preference number: 4 (lower is better)
Translates to: SMILCHTEPRVLTRNCFGSQTRT*RVKSMI
Trigger: AATCATGGACTTAACCCGTCATGTTCTGGTTTGAGA...ACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAATCATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp AAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCGTAAAACTGCTTTTGTaGCCGAGGTCAACTCGTTTA +
Preference number: 4 (lower is better)
Translates to: KLHWPYNQCSSCHPLNLVVKLLL*PRSTRL
Trigger: TAAACGAGTTGACCTCGGTCACAAAAGCAGTTTTAC...GACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp CACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGGTAAAACTGCTTTTGTaGCCGAGGTCAACTCGTTTA +
Preference number: 4 (lower is better)
Translates to: HLRICLSLEIPTTFPSSGVKLLL*PRSTRL
Trigger: TAAACGAGTTGACCTCGGTCACAAAAGCAGTTTTAC...CCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp TTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGACCAACTGTCCTCAGCACTaGGAGAAGGAACCATTTATT +
Preference number: 4 (lower is better)
Translates to: LRICLSLEIPTTFPSSGTNCPQH*EKEPFI
Trigger: AATAAATGGTTCCTTCTCTCAGTGCTGAGGACAGTT...GGTCCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp TCCATGATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTAACTGTCCTCAGCACTaGGAGAAGGAACCATTTATT +
Preference number: 4 (lower is better)
Translates to: SMILCHTEPRVLTRNCFGNCPQH*EKEPFI
Trigger: AATAAATGGTTCCTTCTCTCAGTGCTGAGGACAGTT...ACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAATCATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp AAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCAACTGTCCTCAGCACTaGGAGAAGGAACCATTTATT +
Preference number: 4 (lower is better)
Translates to: KLHWPYNQCSSCHPLNLVNCPQH*EKEPFI
Trigger: AATAAATGGTTCCTTCTCTCAGTGCTGAGGACAGTT...GACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR GCA 90 bp ATCCAGTTTTGTCTTCCCTTCAAGGCCACATATGTCCTGTTGAGTCCAAAGCATAATCAATGTTCCAGTTaGCATCCACTGAATTTGGTC +
Preference number: 4 (lower is better)
Translates to: IQFCLPFKATYVLLSPKHNQCSS*HPLNLV
Trigger: GACCAAATTCAGTGGATGGCAACTGGAACATTGATT...ATGCTTTGGACTCAACAGGACATATGTGGCCTTGAAGGGAAGACAAAACTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp ATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTCATAAAAGAGGGATTCTGCAATaGCCTTGGCGTCTTAAACAC +
Preference number: 4 (lower is better)
Translates to: ILCHTEPRVLTRNCFGHKRGILQ*PWRLKH
Trigger: GTGTTTAAGACGCCAAGGGCATTGCAGAATCCCTCT...TTTATGACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp TGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTAAAACAGCACTTGCGAATCTaGTTGAGTTTAGAAATCCCT +
Preference number: 4 (lower is better)
Translates to: WPYNQCSSCHPLNLVLLKQHLRI*LSLEIP
Trigger: AGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTG...TTTTAGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp GATGCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCAGCACTTGCGAATCTaGTTGAGTTTAGAAATCCCT +
Preference number: 4 (lower is better)
Translates to: DARRLRIQTGILAHGIIHQHLRI*LSLEIP
Trigger: AGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTG...ATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp GACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTTCCCTGCTTGTGTATaGCTGTTAAATAACTGTACC +
Preference number: 4 (lower is better)
Translates to: DKRTALANLLEFRNPYNFFPACV*LLNNCT
Trigger: GGTACAGTTATTTAACAGGCATACACAAGCAGGGAA...AAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp ATCCAGTTTTGTCTTCCCTTCAAGGCCACATATGTCCTGTTGAGTCCAAAGCATTTCCCTGCTTGTGTATaGCTGTTAAATAACTGTACC +
Preference number: 4 (lower is better)
Translates to: IQFCLPFKATYVLLSPKHFPACV*LLNNCT
Trigger: GGTACAGTTATTTAACAGGCATACACAAGCAGGGAA...ATGCTTTGGACTCAACAGGACATATGTGGCCTTGAAGGGAAGACAAAACTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp CTGACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTATCCATGGCCTTAGCTaGTGTTTTATAAAACCCTTT +
Preference number: 4 (lower is better)
Translates to: LTSAQHLRICLSLEIPTTIHGLS*CFIKPF
Trigger: AAAGGGTTTTATAAAACAGCAGCTAAGGCCATGGAT...AGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp AAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCTTGCCATCCATGTTCTaGAAAAAGGATGTGTCGATC +
Preference number: 4 (lower is better)
Translates to: KLHWPYNQCSSCHPLNLVLPSMF*KKDVSI
Trigger: GATCGACACATCCTTTTTCCAGAACATGGATGGCAA...GACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp GACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTGGCATACTGGCCCATaGAATTATTCATCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: DKRTALANLLEFRNPYNFWHTGP*NYSSLC
Trigger: ACAAAGAGATGAATAATTCCATGGGCCAGTATGCCA...AAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp AGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTTTCAAACTGGCATACTaGCCCATGGAATTATTCATC +
Preference number: 4 (lower is better)
Translates to: SWVKTSLALQSMFQLPSTFKLAY*PMELFI
Trigger: GATGAATAATTCCATGGGCCAGTATGCCAGTTTGAA...AGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp TTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGACCACTGAGAATTCAAACTaGCATACTGGCCCATGGAAT +
Preference number: 4 (lower is better)
Translates to: LRICLSLEIPTTFPSSGTTENSN*HTGPWN
Trigger: ATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGT...GGTCCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp ACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTATTCTGCAATGCCCTTaGCGTCTTAAACACACAAAC +
Preference number: 4 (lower is better)
Translates to: TSAQHLRICLSLEIPTTFILQCP*RLKHTN
Trigger: GTTTGTGTGTTTAAGACGCCAAGGGCATTGCAGAAT...AAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp AAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCATTCTGCAATGCCCTTaGCGTCTTAAACACACAAAC +
Preference number: 4 (lower is better)
Translates to: KLHWPYNQCSSCHPLNLVILQCP*RLKHTN
Trigger: GTTTGTGTGTTTAAGACGCCAAGGGCATTGCAGAAT...GACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp CTTCTGCTGTACTGCAGTAGGTACATTCGAAAAATTCTTGATAGTGCAAGAAGTGCTAATTTTGGGAAGTaGCTTCACTTTGCGAATCGG +
Preference number: 4 (lower is better)
Translates to: LLLYCSRYIRKILDSARSANFGK*LHFANR
Trigger: CCGATTCGCAAAGTGAAGTCACTTCCCAAAATTAGC...ACTTCTTGCACTATCAAGAATTTTTCGAATGTACCTACTGCAGTACAGCAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281428.12
CDS-3UTR TCA 90 bp CTTCTGCTGTACTGCAGTAGGTACATTCGAAAAATTCTTGATAGTGCAAGAAGTGGGGAGGACTTTTGTTaGGGCCAGAATTCATGTTAT +
Preference number: 4 (lower is better)
Translates to: LLLYCSRYIRKILDSARSGEDFC*GQNSCY
Trigger: ATAACATGAATTCTGGCCTCAACAAAAGTCCTCCCC...ACTTCTTGCACTATCAAGAATTTTTCGAATGTACCTACTGCAGTACAGCAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp GTCCTTACATACAGGTTTATCCATGGCCTTAGCTGCTGTTTTATAAAACCCTTTGGGGAGGACTTTTGTTaGGGCCAGAATTCATGTTAT +
Preference number: 4 (lower is better)
Translates to: VLTYRFIHGLSCCFIKPFGEDFC*GQNSCY
Trigger: ATAACATGAATTCTGGCCTCAACAAAAGTCCTCCCC...AAAGGGTTTTATAAAACAGCAGCTAAGGCCATGGATAAACCTGTATGTAAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp AAACTGGAGACAAATGTTCCGAAACACATCCCATTTCATTTAGGTAGACATGTTGCTCTGTATTCTTACTaGTCGTTTGTGCCCCTCCAA +
Preference number: 4 (lower is better)
Translates to: KLETNVPKHIPFHLGRHVALYSY*SFVPLQ
Trigger: TTGGAGGGGCACAAACGATCAGTAAGAATACAGAGC...AACATGTCTACCTAAATGAAATGGGATGTGTTTCGGAACATTTGTCTCCAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp TTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGATTATAGGCCAGCAGTaGACCTGGATCCATTCATGT +
Preference number: 4 (lower is better)
Translates to: FFPSNSSWVKTSLALQSMIIGQQ*TWIHSC
Trigger: ACATGAATGGATCCAGGTTCACTGCTGGCCTATAAT...CATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344954.10
ENST00000608303.5
CDS-3UTR GCA 90 bp TGTTACACGCATTTCCAAAGCATTAAAGATCTAAATGGATTATCTTTTCCCTGCTCTGGCTGGGGCCGTTaGTCTGTATTCTTACTGATC +
Preference number: 4 (lower is better)
Translates to: CYTHFQSIKDLNGLSFPCSGWGR*SVFLLI
Trigger: GATCAGTAAGAATACAGAGCAACGGCCCCAGCCAGA...GCAGGGAAAAGATAATCCATTTAGATCTTTAATGCTTTGGAAATGCGTGTAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp TGTTACACGCATTTCCAAAGCATTAAAGATCTAAATGGATTATCTTTTCCCTGCGCAGAGCCTGGGCAATaGCGTGGAAGTCAAATTTGT +
Preference number: 4 (lower is better)
Translates to: CYTHFQSIKDLNGLSFPCAEPGQ*RGSQIC
Trigger: ACAAATTTGACTTCCACGGCATTGCCCAGGCTCTGC...GCAGGGAAAAGATAATCCATTTAGATCTTTAATGCTTTGGAAATGCGTGTAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp GACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTCCAGTAATCTTAATATaGAACTCACAAGATGCTAGG +
Preference number: 4 (lower is better)
Translates to: DKRTALANLLEFRNPYNFPVILI*NSQDAR
Trigger: CCTAGCATCTTGTGAGTTGCATATTAAGATTACTGG...AAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp TCCATGATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTAATCAATGTTCCAGTTaGCATCCACTGAATTTGGTC +
Preference number: 4 (lower is better)
Translates to: SMILCHTEPRVLTRNCFGNQCSS*HPLNLV
Trigger: GACCAAATTCAGTGGATGGCAACTGGAACATTGATT...ACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAATCATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp TGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTAAAAAATCAATGTTCCAGTTaGCATCCACTGAATTTGGTC +
Preference number: 4 (lower is better)
Translates to: WPYNQCSSCHPLNLVLLKNQCSS*HPLNLV
Trigger: GACCAAATTCAGTGGATGGCAACTGGAACATTGATT...TTTTAGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp GATGCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATTTCCCTGCTTGTGTATaGCTGTTAAATAACTGTACC +
Preference number: 4 (lower is better)
Translates to: DARRLRIQTGILAHGIIHFPACV*LLNNCT
Trigger: GGTACAGTTATTTAACAGGCATACACAAGCAGGGAA...ATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp CACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGTTCCCTGCTTGTGTATaGCTGTTAAATAACTGTACC +
Preference number: 4 (lower is better)
Translates to: HLRICLSLEIPTTFPSSGFPACV*LLNNCT
Trigger: GGTACAGTTATTTAACAGGCATACACAAGCAGGGAA...CCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp CACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTCAGAGCTGTGATTATTaGAGTACTGTTACACGCATT +
Preference number: 4 (lower is better)
Translates to: HTNLLSIKFQLGENFTGLQSCDY*STVTRI
Trigger: AATGCGTGTAACAGTACTGCAATAATCACAGCTCTG...AAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp CACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGCAGAGCTGTGATTATTaGAGTACTGTTACACGCATT +
Preference number: 4 (lower is better)
Translates to: HLRICLSLEIPTTFPSSGQSCDY*STVTRI
Trigger: AATGCGTGTAACAGTACTGCAATAATCACAGCTCTG...CCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp AAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCTGGCATACTGGCCCATaGAATTATTCATCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: KLHWPYNQCSSCHPLNLVWHTGP*NYSSLC
Trigger: ACAAAGAGATGAATAATTCCATGGGCCAGTATGCCA...GACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp ACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTTTCAAACTGGCATACTaGCCCATGGAATTATTCATC +
Preference number: 4 (lower is better)
Translates to: TSAQHLRICLSLEIPTTFFKLAY*PMELFI
Trigger: GATGAATAATTCCATGGGCCAGTATGCCAGTTTGAA...AAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp CACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGTTCAAACTGGCATACTaGCCCATGGAATTATTCATC +
Preference number: 4 (lower is better)
Translates to: HLRICLSLEIPTTFPSSGFKLAY*PMELFI
Trigger: GATGAATAATTCCATGGGCCAGTATGCCAGTTTGAA...CCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp CTTGGCGTCTTAAACACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAACTGAGAATTCAAACTaGCATACTGGCCCATGGAAT +
Preference number: 4 (lower is better)
Translates to: LGVLNTQTFFPSNSSWVKTENSN*HTGPWN
Trigger: ATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGT...TTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTGTTTAAGACGCCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp AAACTGGAGACAAATGTTCCGAAACACATCCCATTTCATTTAGGTAGACATGTTATTATAGGCCAGCAGTaGACTTTCCCTGAGGTAACT +
Preference number: 4 (lower is better)
Translates to: KLETNVPKHIPFHLGRHVIIGQQ*TFPEVT
Trigger: AGTTACCTCAGGGAAAGTTCACTGCTGGCCTATAAT...AACATGTCTACCTAAATGAAATGGGATGTGTTTCGGAACATTTGTCTCCAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281428.12
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp ACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCTTTGTTCAGTAAAACTGCTTTTGTaGCCGAGGTCAACTCGTTTA +
Preference number: 4 (lower is better)
Translates to: TENSNWHTGPWNYSSLCSVKLLL*PRSTRL
Trigger: TAAACGAGTTGACCTCGGTCACAAAAGCAGTTTTAC...TGAACAAAGAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp TCCATGATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTCCAGTAATCTTAATATaGAACTCACAAGATGCTAGG +
Preference number: 4 (lower is better)
Translates to: SMILCHTEPRVLTRNCFGPVILI*NSQDAR
Trigger: CCTAGCATCTTGTGAGTTGCATATTAAGATTACTGG...ACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAATCATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp TTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGACCCCAGTAATCTTAATATaGAACTCACAAGATGCTAGG +
Preference number: 4 (lower is better)
Translates to: LRICLSLEIPTTFPSSGTPVILI*NSQDAR
Trigger: CCTAGCATCTTGTGAGTTGCATATTAAGATTACTGG...GGTCCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp TCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAAATCAATGTTCCAGTTaGCATCCACTGAATTTGGTC +
Preference number: 4 (lower is better)
Translates to: SIKFQLGENFTGLTINVPNQCSS*HPLNLV
Trigger: GACCAAATTCAGTGGATGGCAACTGGAACATTGATT...TGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp CTTGGCGTCTTAAACACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAAATCAATGTTCCAGTTaGCATCCACTGAATTTGGTC +
Preference number: 4 (lower is better)
Translates to: LGVLNTQTFFPSNSSWVKNQCSS*HPLNLV
Trigger: GACCAAATTCAGTGGATGGCAACTGGAACATTGATT...TTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTGTTTAAGACGCCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp CTTCTGCTGTACTGCAGTAGGTACATTCGAAAAATTCTTGATAGTGCAAGAAGTCAGCACTTGCGAATCTaGTTGAGTTTAGAAATCCCT +
Preference number: 4 (lower is better)
Translates to: LLLYCSRYIRKILDSARSQHLRI*LSLEIP
Trigger: AGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTG...ACTTCTTGCACTATCAAGAATTTTTCGAATGTACCTACTGCAGTACAGCAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR GCA 90 bp TTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGACCGGATTATCTTTTCCCTaGTTGTGTATGCCTGTTAAA +
Preference number: 4 (lower is better)
Translates to: LRICLSLEIPTTFPSSGTGLSFP*LCMPVK
Trigger: TTTAACAGGCATACACAAGCAGGGAAAAGATAATCC...GGTCCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp ACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTGGATTATCTTTTCCCTaGTTGTGTATGCCTGTTAAA +
Preference number: 4 (lower is better)
Translates to: TSAQHLRICLSLEIPTTFGLSFP*LCMPVK
Trigger: TTTAACAGGCATACACAAGCAGGGAAAAGATAATCC...AAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp TCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCACAGAGCTGTGATTATTaGAGTACTGTTACACGCATT +
Preference number: 4 (lower is better)
Translates to: SIKFQLGENFTGLTINVPQSCDY*STVTRI
Trigger: AATGCGTGTAACAGTACTGCAATAATCACAGCTCTG...TGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp CACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTATCCATGGCCTTAGCTaGTGTTTTATAAAACCCTTT +
Preference number: 4 (lower is better)
Translates to: HTNLLSIKFQLGENFTGLIHGLS*CFIKPF
Trigger: AAAGGGTTTTATAAAACAGCAGCTAAGGCCATGGAT...AAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp ACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCTTTGTTCATTGCCATCCATGTTCTaGAAAAAGGATGTGTCGATC +
Preference number: 4 (lower is better)
Translates to: TENSNWHTGPWNYSSLCSLPSMF*KKDVSI
Trigger: GATCGACACATCCTTTTTCCAGAACATGGATGGCAA...TGAACAAAGAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp CTTGGCGTCTTAAACACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAATGGCATACTGGCCCATaGAATTATTCATCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: LGVLNTQTFFPSNSSWVKWHTGP*NYSSLC
Trigger: ACAAAGAGATGAATAATTCCATGGGCCAGTATGCCA...TTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTGTTTAAGACGCCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp GTCCTTACATACAGGTTTATCCATGGCCTTAGCTGCTGTTTTATAAAACCCTTTACTGAGAATTCAAACTaGCATACTGGCCCATGGAAT +
Preference number: 4 (lower is better)
Translates to: VLTYRFIHGLSCCFIKPFTENSN*HTGPWN
Trigger: ATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGT...AAAGGGTTTTATAAAACAGCAGCTAAGGCCATGGATAAACCTGTATGTAAGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp ACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCTTTGTTCAACTGAGAATTCAAACTaGCATACTGGCCCATGGAAT +
Preference number: 4 (lower is better)
Translates to: TENSNWHTGPWNYSSLCSTENSN*HTGPWN
Trigger: ATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGT...TGAACAAAGAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp GTCCTTACATACAGGTTTATCCATGGCCTTAGCTGCTGTTTTATAAAACCCTTTATTCTGCAATGCCCTTaGCGTCTTAAACACACAAAC +
Preference number: 4 (lower is better)
Translates to: VLTYRFIHGLSCCFIKPFILQCP*RLKHTN
Trigger: GTTTGTGTGTTTAAGACGCCAAGGGCATTGCAGAAT...AAAGGGTTTTATAAAACAGCAGCTAAGGCCATGGATAAACCTGTATGTAAGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp CTTCTGCTGTACTGCAGTAGGTACATTCGAAAAATTCTTGATAGTGCAAGAAGTATTCTGCAATGCCCTTaGCGTCTTAAACACACAAAC +
Preference number: 4 (lower is better)
Translates to: LLLYCSRYIRKILDSARSILQCP*RLKHTN
Trigger: GTTTGTGTGTTTAAGACGCCAAGGGCATTGCAGAAT...ACTTCTTGCACTATCAAGAATTTTTCGAATGTACCTACTGCAGTACAGCAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
3UTR CAA 72 bp CCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTaGGTCCTCCTAAAATTAGATTATAAGCTTCCCACC +
Preference number: 4 (lower is better)
Translates to: PYNQCSSCHPLN*VLLKLDYKLPT
Trigger: GGTGGGAAGCTTATAATCTAATTTTAGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
3UTR CAA 72 bp GTGAAAACTTCACTGGCCTTACAATCAATGTTCCAGTaGCCATCCACTGAATTTGGTCCTCCTAAAATTAGA +
Preference number: 4 (lower is better)
Translates to: VKTSLALQSMFQ*PSTEFGPPKIR
Trigger: TCTAATTTTAGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR TCA 90 bp AAACTGGAGACAAATGTTCCGAAACACATCCCATTTCATTTAGGTAGACATGTTAAGAAGGGTCTTCTTTaGCACTCAATCGTGAGGATT +
Preference number: 4 (lower is better)
Translates to: KLETNVPKHIPFHLGRHVKKGLL*HSIVRI
Trigger: AATCCTCACGATTGAGTGTCAAAGAAGACCCTTCTT...AACATGTCTACCTAAATGAAATGGGATGTGTTTCGGAACATTTGTCTCCAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp AAACTGGAGACAAATGTTCCGAAACACATCCCATTTCATTTAGGTAGACATGTTAAGATGCTAGGAGACTaGGAATTCAAACTGGCATAC +
Preference number: 4 (lower is better)
Translates to: KLETNVPKHIPFHLGRHVKMLGD*EFKLAY
Trigger: GTATGCCAGTTTGAATTCTCAGTCTCCTAGCATCTT...AACATGTCTACCTAAATGAAATGGGATGTGTTTCGGAACATTTGTCTCCAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR GCA 90 bp TTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGATTTATACAGTAAGTTaGCTTCTGATTGGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: FFPSNSSWVKTSLALQSMIYTVS*LLIGWP
Trigger: GGGCCAACCAATCAGAAGGCAACTTACTGTATAAAT...CATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp CTTCTGCTGTACTGCAGTAGGTACATTCGAAAAATTCTTGATAGTGCAAGAAGTATTTATACAGTAAGTTaGCTTCTGATTGGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: LLLYCSRYIRKILDSARSIYTVS*LLIGWP
Trigger: GGGCCAACCAATCAGAAGGCAACTTACTGTATAAAT...ACTTCTTGCACTATCAAGAATTTTTCGAATGTACCTACTGCAGTACAGCAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR GCA 90 bp ATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTCATAAAATTTATACAGTAAGTTaGCTTCTGATTGGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: ILCHTEPRVLTRNCFGHKIYTVS*LLIGWP
Trigger: GGGCCAACCAATCAGAAGGCAACTTACTGTATAAAT...TTTATGACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp CTTGGCGTCTTAAACACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAGGATTATCTTTTCCCTaGTTGTGTATGCCTGTTAAA +
Preference number: 4 (lower is better)
Translates to: LGVLNTQTFFPSNSSWVKGLSFP*LCMPVK
Trigger: TTTAACAGGCATACACAAGCAGGGAAAAGATAATCC...TTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTGTTTAAGACGCCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp GTCCTTACATACAGGTTTATCCATGGCCTTAGCTGCTGTTTTATAAAACCCTTTCAGAGCTGTGATTATTaGAGTACTGTTACACGCATT +
Preference number: 4 (lower is better)
Translates to: VLTYRFIHGLSCCFIKPFQSCDY*STVTRI
Trigger: AATGCGTGTAACAGTACTGCAATAATCACAGCTCTG...AAAGGGTTTTATAAAACAGCAGCTAAGGCCATGGATAAACCTGTATGTAAGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp AAACTGGAGACAAATGTTCCGAAACACATCCCATTTCATTTAGGTAGACATGTTTTGCCATCCATGTTCTaGAAAAAGGATGTGTCGATC +
Preference number: 4 (lower is better)
Translates to: KLETNVPKHIPFHLGRHVLPSMF*KKDVSI
Trigger: GATCGACACATCCTTTTTCCAGAACATGGATGGCAA...AACATGTCTACCTAAATGAAATGGGATGTGTTTCGGAACATTTGTCTCCAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281428.12
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CCA 90 bp ACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCTTTGTTCATGGCATACTGGCCCATaGAATTATTCATCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: TENSNWHTGPWNYSSLCSWHTGP*NYSSLC
Trigger: ACAAAGAGATGAATAATTCCATGGGCCAGTATGCCA...TGAACAAAGAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CCA 90 bp CTTCTGCTGTACTGCAGTAGGTACATTCGAAAAATTCTTGATAGTGCAAGAAGTTTCAAACTGGCATACTaGCCCATGGAATTATTCATC +
Preference number: 4 (lower is better)
Translates to: LLLYCSRYIRKILDSARSFKLAY*PMELFI
Trigger: GATGAATAATTCCATGGGCCAGTATGCCAGTTTGAA...ACTTCTTGCACTATCAAGAATTTTTCGAATGTACCTACTGCAGTACAGCAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
3UTR CAA 72 bp TTCTGCTGTACTGCAGTAGGTACATTCGAAAAATTCTaGATAGTGCAAGAAGTAAATAGGAAAGTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: FCCTAVGTFEKF*IVQEVNRKVPQ
Trigger: CTGGGGAACTTTCCTATTTACTTCTTGCACTATCAAGAATTTTTCGAATGTACCTACTGCAGTACAGCAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR TCA 90 bp TGTTACACGCATTTCCAAAGCATTAAAGATCTAAATGGATTATCTTTTCCCTGCTCTCAAACCAGAACATaGCGGGTTAAGTCCATGATT +
Preference number: 4 (lower is better)
Translates to: CYTHFQSIKDLNGLSFPCSQTRT*RVKSMI
Trigger: AATCATGGACTTAACCCGTCATGTTCTGGTTTGAGA...GCAGGGAAAAGATAATCCATTTAGATCTTTAATGCTTTGGAAATGCGTGTAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp ACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCTTTGTTCACCAGTAATCTTAATATaGAACTCACAAGATGCTAGG +
Preference number: 4 (lower is better)
Translates to: TENSNWHTGPWNYSSLCSPVILI*NSQDAR
Trigger: CCTAGCATCTTGTGAGTTGCATATTAAGATTACTGG...TGAACAAAGAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp TTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGCCAGTAATCTTAATATaGAACTCACAAGATGCTAGG +
Preference number: 4 (lower is better)
Translates to: FFPSNSSWVKTSLALQSMPVILI*NSQDAR
Trigger: CCTAGCATCTTGTGAGTTGCATATTAAGATTACTGG...CATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp TGTTACACGCATTTCCAAAGCATTAAAGATCTAAATGGATTATCTTTTCCCTGCCAGCACTTGCGAATCTaGTTGAGTTTAGAAATCCCT +
Preference number: 4 (lower is better)
Translates to: CYTHFQSIKDLNGLSFPCQHLRI*LSLEIP
Trigger: AGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTG...GCAGGGAAAAGATAATCCATTTAGATCTTTAATGCTTTGGAAATGCGTGTAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR GCA 90 bp CTTCTGCTGTACTGCAGTAGGTACATTCGAAAAATTCTTGATAGTGCAAGAAGTATCCATGGCCTTAGCTaGTGTTTTATAAAACCCTTT +
Preference number: 4 (lower is better)
Translates to: LLLYCSRYIRKILDSARSIHGLS*CFIKPF
Trigger: AAAGGGTTTTATAAAACAGCAGCTAAGGCCATGGAT...ACTTCTTGCACTATCAAGAATTTTTCGAATGTACCTACTGCAGTACAGCAGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
3UTR CAA 72 bp CTTAAACACACAAACCTTCTTTCCATCAAATTCCAGTaGGGTGAAAACTTCACTGGCCTTACAATCAATGTT +
Preference number: 4 (lower is better)
Translates to: LKHTNLLSIKFQ*GENFTGLTINV
Trigger: AACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTGTTTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS GCA 90 bp CCGGCGCGGCCTCCCTGGCGCCCTGGGCCCTCCCTGCGTGCCCCCTaGGAGCGCCCTGCCCTCACTCCCCTGTGCACGTTTGTTGTTGTA +
Preference number: 5 (lower is better)
Translates to: PARPPWRPGPSLRAP*ERPALTPLCTFVVV
Trigger: TACAACAACAAACGTGCACAGGGGAGTGAGGGCAGGGCGCTCGCAGGGGGCACGCAGGGAGGGCCCAGGGCGCCAGGGAGGCCGCGCCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281428.12
ENST00000527786.7
CDS CCA 90 bp TTGGGGAGATGGGCTGCCGCTCCGTACGCTGAGTCAAAGAGGGACTaGTCGTCGCTCACCACCGACAGAGCCTCCCGGACCCGACGGCCC +
Preference number: 5 (lower is better)
Translates to: LGRWAAAPYAESKRD*SSLTTDRASRTRRP
Trigger: GGGCCGTCGGGTCCGGGAGGCTCTGTCGGTGGTGAGCGACGACCAGTCCCTCTTTGACTCAGCGTACGGAGCGGCAGCCCATCTCCCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527767.7
CDS CCA 90 bp GGGGCTGCCCGTAGTCAGGACTCCCCGAGGCAGTCATGTCGGCCTTaGGGAGATGGGCTGCCGCTCCGTACGCTGAGTCAAAGAGGGACT +
Preference number: 5 (lower is better)
Translates to: GAARSQDSPRQSCRP*GDGLPLRTLSQRGT
Trigger: AGTCCCTCTTTGACTCAGCGTACGGAGCGGCAGCCCATCTCCCCAAGGCCGACATGACTGCCTCGGGGAGTCCTGACTACGGGCAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527767.7
ENST00000527786.7
ENST00000534087.3
ENST00000608055.1
ENST00000608303.5
CDS TCA 90 bp GGCAGTCATGTCGGCCTTGGGGAGATGGGCTGCCGCTCCGTACGCTaGGTCAAAGAGGGACTGGTCGTCGCTCACCACCGACAGAGCCTC +
Preference number: 5 (lower is better)
Translates to: GSHVGLGEMGCRSVR*VKEGLVVAHHRQSL
Trigger: GAGGCTCTGTCGGTGGTGAGCGACGACCAGTCCCTCTTTGACTCAGCGTACGGAGCGGCAGCCCATCTCCCCAAGGCCGACATGACTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527767.7
ENST00000527786.7
ENST00000534087.3
ENST00000608055.1
ENST00000608303.5
CDS-3UTR CAA 90 bp GCCAGCGCAAGCCCTGCGTGCGGCCATGGGGCTCCACGGCTGCCGCTCAGGGTGGCCACATATGTCCTGTaGAGTCCAAAGCATCCAGTA +
Preference number: 5 (lower is better)
Translates to: ASASPACGHGAPRLPLRVATYVL*SPKHPV
Trigger: TACTGGATGCTTTGGACTCAACAGGACATATGTGGC...CACCCTGAGCGGCAGCCGTGGAGCCCCATGGCCGCACGCAGGGCTTGCGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429175.7
CDS GCA 90 bp CCCTCCCTGCGTGCCCCCTGCGAGCGCCCTGCCCTCACTCCCCTGTaGACGTTTGTTGTTGTAGCGGAGCGAAAGAGACAGTTAACCGGA +
Preference number: 5 (lower is better)
Translates to: PSLRAPCERPALTPL*TFVVVAERKRQLTG
Trigger: TCCGGTTAACTGTCTCTTTCGCTCCGCTACAACAACAAACGTGCACAGGGGAGTGAGGGCAGGGCGCTCGCAGGGGGCACGCAGGGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281428.12
CDS-3UTR CAA 90 bp TTGGACTCGCCTCCGCCCACCAGCTTGCTGCATTTGCTAACGCTGCAGTCCACCTGCCCGCTTCCAGGGTaGGCTAGGCGACTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: LDSPPPTSLLHLLTLQSTCPLPG*ARRLLV
Trigger: GACCAGCAGTCGCCTAGCCAACCCTGGAAGCGGGCA...GGTGGACTGCAGCGTTAGCAAATGCAGCAAGCTGGTGGGCGGAGGCGAGTCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429175.7
CDS CCA 90 bp CAAGCCCTGCGTGCGGCCATGGGGCTCCACGGCTGCCGCTCAGGGTaGGTACAGGTGAAGCCCAGCATAAAAGGCTGCTCTTTAATGAGG +
Preference number: 5 (lower is better)
Translates to: QALRAAMGLHGCRSG*VQVKPSIKGCSLMR
Trigger: CCTCATTAAAGAGCAGCCTTTTATGCTGGGCTTCACCTGTACCCACCCTGAGCGGCAGCCGTGGAGCCCCATGGCCGCACGCAGGGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281428.12
ENST00000429175.7
CDS-3UTR CAA 90 bp CACAGCTGGATCTGCCCGCTTCCAGGGTTGGCTAGGCGACTGCTGGTCGGGCCCATGACTCTCCTCTCGTaGGTGGTCATGTTGGGAGGA +
Preference number: 5 (lower is better)
Translates to: HSWICPLPGLARRLLVGPMTLLS*VVMLGG
Trigger: TCCTCCCAACATGACCACCAACGAGAGGAGAGTCAT...GGGCCCGACCAGCAGTCGCCTAGCCAACCCTGGAAGCGGGCAGATCCAGCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429175.7
CDS CCA 90 bp TTGGGGAGATGGGCTGCCGCTCCGTACGCTGAGTCAAAGAGGGACTaGTCGTCGCTCACCACCGACAGAGCCTCCTTAATAGTCCCGTCC +
Preference number: 5 (lower is better)
Translates to: LGRWAAAPYAESKRD*SSLTTDRASLIVPS
Trigger: GGACGGGACTATTAAGGAGGCTCTGTCGGTGGTGAGCGACGACCAGTCCCTCTTTGACTCAGCGTACGGAGCGGCAGCCCATCTCCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
CDS CCA 90 bp TTGGGGAGATGGGCTGCCGCTCCGTACGCTGAGTCAAAGAGGGACTaGTCGTCGCTCACCACCGACAGAGCCTCAATTCCACTTCCTGGG +
Preference number: 5 (lower is better)
Translates to: LGRWAAAPYAESKRD*SSLTTDRASIPLPG
Trigger: CCCAGGAAGTGGAATTGAGGCTCTGTCGGTGGTGAGCGACGACCAGTCCCTCTTTGACTCAGCGTACGGAGCGGCAGCCCATCTCCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534087.3
CDS CCA 90 bp CTTGACGTTGACCCTCACTGGCTGATTGATCCACTCCTGCTGTGGTaGGAGGGGGTTGATCTTGTGGGGCTGCCCGTAGTCAGGACTCCC +
Preference number: 5 (lower is better)
Translates to: LDVDPHWLIDPLLLW*EGVDLVGLPVVRTP
Trigger: GGGAGTCCTGACTACGGGCAGCCCCACAAGATCAACCCCCTCCCACCACAGCAGGAGTGGATCAATCAGCCAGTGAGGGTCAACGTCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527767.7
ENST00000527786.7
ENST00000534087.3
ENST00000608055.1
ENST00000608303.5
CDS-3UTR CAA 90 bp GTCCATATAGCTGTTGTAGTTCATGGGGTTGGACTCGCCTCCGCCCACCAGCTTGCAGTCATGTCGGCCTaGGGGAGATGGGCTGCCGCT +
Preference number: 5 (lower is better)
Translates to: VHIAVVVHGVGLASAHQLAVMSA*GRWAAA
Trigger: AGCGGCAGCCCATCTCCCCAAGGCCGACATGACTGC...AAGCTGGTGGGCGGAGGCGAGTCCAACCCCATGAACTACAACAGCTATATGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429175.7
CDS-3UTR CAA 90 bp CACAGCTGGATCTGCCCGCTTCCAGGGTTGGCTAGGCGACTGCTGGTCGGGCCCCCAGAATTCATGTTATaGCCCCAAGCTCCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: HSWICPLPGLARRLLVGPPEFML*PQAPLL
Trigger: CAGAAGAGGAGCTTGGGGCAATAACATGAATTCTGG...GGGCCCGACCAGCAGTCGCCTAGCCAACCCTGGAAGCGGGCAGATCCAGCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
CDS-3UTR CAA 90 bp TGGCTAGGCGACTGCTGGTCGGGCCCAGGATCTGATACGGATCTGGCTGGGGCCCGGAGGAAGTCCTCCTaGTTCATTTTACACAGTTCC +
Preference number: 5 (lower is better)
Translates to: WLGDCWSGPGSDTDLAGARRKSS*FILHSS
Trigger: GGAACTGTGTAAAATGAACAAGGAGGACTTCCTCCG...GGCCCCAGCCAGATCCGTATCAGATCCTGGGCCCGACCAGCAGTCGCCTAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429175.7
CDS GCA 90 bp GGCTGCCGCTCAGGGTGGGTACAGGTGAAGCCCAGCATAAAAGGCTaGTCTTTAATGAGGCAGCTGGCGCCTGGATCCATTCATGTGGTC +
Preference number: 5 (lower is better)
Translates to: GCRSGWVQVKPSIKG*SLMRQLAPGSIHVV
Trigger: GACCACATGAATGGATCCAGGCGCCAGCTGCCTCATTAAAGAGCAGCCTTTTATGCTGGGCTTCACCTGTACCCACCCTGAGCGGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281428.12
ENST00000429175.7
CDS CCA 90 bp TCCTGGGGGCCGACTCCAGTCCCTGATTTCAGCACATGGATGATGTaGGATGACATCACAGCGGTGGGAGCACATTCCAGGCTCTCTGAG +
Preference number: 5 (lower is better)
Translates to: SWGPTPVPDFSTWMM*DDITAVGAHSRLSE
Trigger: CTCAGAGAGCCTGGAATGTGCTCCCACCGCTGTGATGTCATCCCACATCATCCATGTGCTGAAATCAGGGACTGGAGTCGGCCCCCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS-3UTR CAA 90 bp ACAGTAAGTTGCCTTCTGATTGGTTGGCCCTGGTCTGATGGTCTGACAAGCGCATGTGGTGGGAGGGGGTaGATCTTGTGGGGCTGCCCG +
Preference number: 5 (lower is better)
Translates to: TVSCLLIGWPWSDGLTSACGGRG*ILWGCP
Trigger: CGGGCAGCCCCACAAGATCAACCCCCTCCCACCACA...TGCGCTTGTCAGACCATCAGACCAGGGCCAACCAATCAGAAGGCAACTTACTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp CTGATACGGATCTGGCTGGGGCCGTTGCTCTGTATTCTTACTGATCGTTTGTGCTGCCCGCTTCCAGGGTaGGCTAGGCGACTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: LIRIWLGPLLCILTDRLCCPLPG*ARRLLV
Trigger: GACCAGCAGTCGCCTAGCCAACCCTGGAAGCGGGCA...GCACAAACGATCAGTAAGAATACAGAGCAACGGCCCCAGCCAGATCCGTATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
CDS TCA 90 bp GACATTCCTGGGGGCCGACTCCAGTCCCTGATTTCAGCACATGGATaGTGTGGGATGACATCACAGCGGTGGGAGCACATTCCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: DIPGGRLQSLISAHG*CGMTSQRWEHIPGS
Trigger: AGAGCCTGGAATGTGCTCCCACCGCTGTGATGTCATCCCACATCATCCATGTGCTGAAATCAGGGACTGGAGTCGGCCCCCAGGAATGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS-3UTR CAA 90 bp CACAGCTGGATCTGCCCGCTTCCAGGGTTGGCTAGGCGACTGCTGGTCGGGCCCTGCCATCCACTGAATTaGGTCCTCCTAAAATTAGAT +
Preference number: 5 (lower is better)
Translates to: HSWICPLPGLARRLLVGPCHPLN*VLLKLD
Trigger: ATCTAATTTTAGGAGGACCAAATTCAGTGGATGGCA...GGGCCCGACCAGCAGTCGCCTAGCCAACCCTGGAAGCGGGCAGATCCAGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
CDS-3UTR CAA 90 bp CACAGCTGGATCTGCCCGCTTCCAGGGTTGGCTAGGCGACTGCTGGTCGGGCCCAATTTATACAGTAAGTaGCCTTCTGATTGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: HSWICPLPGLARRLLVGPNLYSK*PSDWLA
Trigger: GGCCAACCAATCAGAAGGCAACTTACTGTATAAATT...GGGCCCGACCAGCAGTCGCCTAGCCAACCCTGGAAGCGGGCAGATCCAGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
CDS TCA 90 bp CCATTCATGTGGTCATACTCCCGCTTGACGTTGACCCTCACTGGCTaGTTGATCCACTCCTGCTGTGGTGGGAGGGGGTTGATCTTGTGG +
Preference number: 5 (lower is better)
Translates to: PFMWSYSRLTLTLTG*LIHSCCGGRGLILW
Trigger: CCACAAGATCAACCCCCTCCCACCACAGCAGGAGTGGATCAATCAGCCAGTGAGGGTCAACGTCAAGCGGGAGTATGACCACATGAATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527767.7
ENST00000527786.7
ENST00000534087.3
ENST00000608055.1
ENST00000608303.5
CDS TCA 90 bp AATGCAGTGAGTAGGACCCAGCTCCCCGAGGGGAGCAAGACGTCTTaGCAGATGTGCTTTCTCACTCATTCCTTCGCCCACTCTCCACTG +
Preference number: 5 (lower is better)
Translates to: NAVSRTQLPEGSKTS*QMCFLTHSFAHSPL
Trigger: CAGTGGAGAGTGGGCGAAGGAATGAGTGAGAAAGCACATCTGTCAAGACGTCTTGCTCCCCTCGGGGAGCTGGGTCCTACTCACTGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS-3UTR CAA 90 bp ACAGTAAGTTGCCTTCTGATTGGTTGGCCCTGGTCTGATGGTCTGACAAGCGCACCTCCGCCCACCAGCTaGCTGCATTTGCTAACGCTG +
Preference number: 5 (lower is better)
Translates to: TVSCLLIGWPWSDGLTSAPPPTS*LHLLTL
Trigger: CAGCGTTAGCAAATGCAGCAAGCTGGTGGGCGGAGG...TGCGCTTGTCAGACCATCAGACCAGGGCCAACCAATCAGAAGGCAACTTACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS TCA 90 bp TTGGGTGAAAGGCCCATAAGAAGAGTGTCTCAAAGCCCATGGCCATaGCATTCCTGGGGGCCGACTCCAGTCCCTGATTTCAGCACATGG +
Preference number: 5 (lower is better)
Translates to: LGERPIRRVSQSPWP*HSWGPTPVPDFSTW
Trigger: CCATGTGCTGAAATCAGGGACTGGAGTCGGCCCCCAGGAATGTCATGGCCATGGGCTTTGAGACACTCTTCTTATGGGCCTTTCACCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS GCA 90 bp CATCCTAAGCTCCAGGAACCTGAGGTCCTCACTGACTGTCAGACATaGCAAGCTCATGTCTTCCCCAGCCCATATCGCCACAGGTCCAAA +
Preference number: 5 (lower is better)
Translates to: HPKLQEPEVLTDCQT*QAHVFPSPYRHRSK
Trigger: TTTGGACCTGTGGCGATATGGGCTGGGGAAGACATGAGCTTGGCATGTCTGACAGTCAGTGAGGACCTCAGGTTCCTGGAGCTTAGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS CCA 90 bp GGATCCATTCATGTGGTCATACTCCCGCTTGACGTTGACCCTCACTaGCTGATTGATCCACTCCTGCTGTGGTGGGAGGGGGTTGATCTT +
Preference number: 5 (lower is better)
Translates to: GSIHVVILPLDVDPH*LIDPLLLWWEGVDL
Trigger: AAGATCAACCCCCTCCCACCACAGCAGGAGTGGATCAATCAGCCAGTGAGGGTCAACGTCAAGCGGGAGTATGACCACATGAATGGATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527767.7
ENST00000527786.7
ENST00000534087.3
ENST00000608055.1
ENST00000608303.5
CDS-3UTR CAA 90 bp GGTCAGCTGAGTGCATACTGTCCACTGAGAGGGATTCTGCAATGCCCTTGGCGTGGAAGTGACTTCACTTaGCGAATCGGGGAGGAAGTC +
Preference number: 5 (lower is better)
Translates to: GQLSAYCPLRGILQCPWRGSDFT*RIGEEV
Trigger: GACTTCCTCCCCGATTCGCAAAGTGAAGTCACTTCC...ACGCCAAGGGCATTGCAGAATCCCTCTCAGTGGACAGTATGCACTCAGCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281428.12
CDS-3UTR CAA 90 bp CTGACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTGCAGTCATGTCGGCCTaGGGGAGATGGGCTGCCGCT +
Preference number: 5 (lower is better)
Translates to: LTSAQHLRICLSLEIPTTAVMSA*GRWAAA
Trigger: AGCGGCAGCCCATCTCCCCAAGGCCGACATGACTGC...AGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp CTGACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTGTGGTGGGAGGGGGTaGATCTTGTGGGGCTGCCCG +
Preference number: 5 (lower is better)
Translates to: LTSAQHLRICLSLEIPTTCGGRG*ILWGCP
Trigger: CGGGCAGCCCCACAAGATCAACCCCCTCCCACCACA...AGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS CCA 90 bp ACCGACAGAGCCTCAATTCCACTTCCTGGGGAGGGGGCTCAGCAGTaGATGACCCAGAGAAAGAATTCCTTAATAGTCCCGTCCATTTGG +
Preference number: 5 (lower is better)
Translates to: TDRASIPLPGEGAQQ*MTQRKNSLIVPSIW
Trigger: CCAAATGGACGGGACTATTAAGGAATTCTTTCTCTGGGTCATCCACTGCTGAGCCCCCTCCCCAGGAAGTGGAATTGAGGCTCTGTCGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534087.3
CDS-3UTR CAA 90 bp AGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGCAGTCATGTCGGCCTaGGGGAGATGGGCTGCCGCT +
Preference number: 5 (lower is better)
Translates to: SWVKTSLALQSMFQLPSTAVMSA*GRWAAA
Trigger: AGCGGCAGCCCATCTCCCCAAGGCCGACATGACTGC...AGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp ATCCAGTTTTGTCTTCCCTTCAAGGCCACATATGTCCTGTTGAGTCCAAAGCATTGTGGTGGGAGGGGGTaGATCTTGTGGGGCTGCCCG +
Preference number: 5 (lower is better)
Translates to: IQFCLPFKATYVLLSPKHCGGRG*ILWGCP
Trigger: CGGGCAGCCCCACAAGATCAACCCCCTCCCACCACA...ATGCTTTGGACTCAACAGGACATATGTGGCCTTGAAGGGAAGACAAAACTGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp AGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTTGTGGTGGGAGGGGGTaGATCTTGTGGGGCTGCCCG +
Preference number: 5 (lower is better)
Translates to: SWVKTSLALQSMFQLPSTCGGRG*ILWGCP
Trigger: CGGGCAGCCCCACAAGATCAACCCCCTCCCACCACA...AGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp TGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTAGATGGTCATACTCCCGCTaGACGTTGACCCTCACTGGC +
Preference number: 5 (lower is better)
Translates to: CPVESKASSKCAGWASARWSYSR*TLTLTG
Trigger: GCCAGTGAGGGTCAACGTCAAGCGGGAGTATGACCA...TCTAGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp TGTGATGCGGCTCCAAAGAAGCTGGAGGAAGTGACAGGCATGGAGGATGGATGGCCAAGGGGAGGACTTTaGTTGAGGCCAGAATTCATG +
Preference number: 5 (lower is better)
Translates to: CDAAPKKLEEVTGMEDGWPRGGL*LRPEFM
Trigger: CATGAATTCTGGCCTCAACAAAAGTCCTCCCCTTGG...CCATCCATCCTCCATGCCTGTCACTTCCTCCAGCTTCTTTGGAGCCGCATCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
CDS-3UTR CAA 90 bp GACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTGCCCGCTTCCAGGGTaGGCTAGGCGACTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: DKRTALANLLEFRNPYNFCPLPG*ARRLLV
Trigger: GACCAGCAGTCGCCTAGCCAACCCTGGAAGCGGGCA...AAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp TGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTAGAAATAGTCCCGTCCATTaGGCCAAGTCTGCAGCCGAG +
Preference number: 5 (lower is better)
Translates to: CPVESKASSKCAGWASARNSPVH*AKSAAE
Trigger: CTCGGCTGCAGACTTGGCCAAATGGACGGGACTATT...TCTAGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CAA 90 bp AAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCGCAGTCATGTCGGCCTaGGGGAGATGGGCTGCCGCT +
Preference number: 5 (lower is better)
Translates to: KLHWPYNQCSSCHPLNLVAVMSA*GRWAAA
Trigger: AGCGGCAGCCCATCTCCCCAAGGCCGACATGACTGC...GACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp AAGTGTGCAGGATGGGCTTCAGCTAGAAGGCCACTGATGAGTAAGCTTCTAGTATGGTCATACTCCCGCTaGACGTTGACCCTCACTGGC +
Preference number: 5 (lower is better)
Translates to: KCAGWASARRPLMSKLLVWSYSR*TLTLTG
Trigger: GCCAGTGAGGGTCAACGTCAAGCGGGAGTATGACCA...TACTAGAAGCTTACTCATCAGTGGCCTTCTAGCTGAAGCCCATCCTGCACACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
CDS-3UTR CAA 90 bp TGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTAGAGGTCGGTGTGGGAGGTaGTATTATAGGCCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: CPVESKASSKCAGWASARGRCGR*YYRPAV
Trigger: CACTGCTGGCCTATAATACAACCTCCCACACCGACC...TCTAGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp GGTCAGCTGAGTGCATACTGTCCACTGAGAGGGATTCTGCAATGCCCTTGGCGTCCAGAATTCATGTTATaGCCCCAAGCTCCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: GQLSAYCPLRGILQCPWRPEFML*PQAPLL
Trigger: CAGAAGAGGAGCTTGGGGCAATAACATGAATTCTGG...ACGCCAAGGGCATTGCAGAATCCCTCTCAGTGGACAGTATGCACTCAGCTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp CACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGTGCCCGCTTCCAGGGTaGGCTAGGCGACTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: HLRICLSLEIPTTFPSSGCPLPG*ARRLLV
Trigger: GACCAGCAGTCGCCTAGCCAACCCTGGAAGCGGGCA...CCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp TGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTAAAATGCCCGCTTCCAGGGTaGGCTAGGCGACTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: WPYNQCSSCHPLNLVLLKCPLPG*ARRLLV
Trigger: GACCAGCAGTCGCCTAGCCAACCCTGGAAGCGGGCA...TTTTAGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp GGTCAGCTGAGTGCATACTGTCCACTGAGAGGGATTCTGCAATGCCCTTGGCGTACAAGCGCACAGCACTaGCGAATCTGCTTGAGTTTA +
Preference number: 5 (lower is better)
Translates to: GQLSAYCPLRGILQCPWRTSAQH*RICLSL
Trigger: TAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGT...ACGCCAAGGGCATTGCAGAATCCCTCTCAGTGGACAGTATGCACTCAGCTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS TCA 90 bp ACCATCCGAACAAATGGAGCACAAACCTCATCAAACAACAGAGTCTaGCGGGGTGAAACACAACCATGCCCTTCAGCCCCTTCTGAGCCT +
Preference number: 5 (lower is better)
Translates to: TIRTNGAQTSSNNRV*RGETQPCPSAPSEP
Trigger: AGGCTCAGAAGGGGCTGAAGGGCATGGTTGTGTTTCACCCCGTCAGACTCTGTTGTTTGATGAGGTTTGTGCTCCATTTGTTCGGATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS-3UTR CAA 90 bp AAGTGTGCAGGATGGGCTTCAGCTAGAAGGCCACTGATGAGTAAGCTTCTAGTAAATAGTCCCGTCCATTaGGCCAAGTCTGCAGCCGAG +
Preference number: 5 (lower is better)
Translates to: KCAGWASARRPLMSKLLVNSPVH*AKSAAE
Trigger: CTCGGCTGCAGACTTGGCCAAATGGACGGGACTATT...TACTAGAAGCTTACTCATCAGTGGCCTTCTAGCTGAAGCCCATCCTGCACACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429175.7
CDS-3UTR CAA 90 bp CTTGGCGTCTTAAACACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAGCAGTCATGTCGGCCTaGGGGAGATGGGCTGCCGCT +
Preference number: 5 (lower is better)
Translates to: LGVLNTQTFFPSNSSWVKAVMSA*GRWAAA
Trigger: AGCGGCAGCCCATCTCCCCAAGGCCGACATGACTGC...TTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTGTTTAAGACGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp CTGACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTGGTCATACTCCCGCTaGACGTTGACCCTCACTGGC +
Preference number: 5 (lower is better)
Translates to: LTSAQHLRICLSLEIPTTWSYSR*TLTLTG
Trigger: GCCAGTGAGGGTCAACGTCAAGCGGGAGTATGACCA...AGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp GCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCCCTCCGCCCACCAGCTaGCTGCATTTGCTAACGCTG +
Preference number: 5 (lower is better)
Translates to: ARRLRIQTGILAHGIIHLPPPTS*LHLLTL
Trigger: CAGCGTTAGCAAATGCAGCAAGCTGGTGGGCGGAGG...GAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CAA 90 bp TGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTAGAATTCTTACTGATCGTTaGTGCCCCTCCAAGGGGAGG +
Preference number: 5 (lower is better)
Translates to: CPVESKASSKCAGWASARILTDR*CPSKGR
Trigger: CCTCCCCTTGGAGGGGCACAAACGATCAGTAAGAAT...TCTAGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp TGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTAGACCAATATTCCACACATaGACCCGGTTACAGCCTGAC +
Preference number: 5 (lower is better)
Translates to: CPVESKASSKCAGWASARPIFHT*TRLQPD
Trigger: GTCAGGCTGTAACCGGGTCAATGTGTGGAATATTGG...TCTAGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CAA 90 bp TTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTGTGGTGGGAGGGGGTaGATCTTGTGGGGCTGCCCG +
Preference number: 5 (lower is better)
Translates to: FFPSNSSWVKTSLALQSMCGGRG*ILWGCP
Trigger: CGGGCAGCCCCACAAGATCAACCCCCTCCCACCACA...CATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp CACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGCCTCCGCCCACCAGCTaGCTGCATTTGCTAACGCTG +
Preference number: 5 (lower is better)
Translates to: HLRICLSLEIPTTFPSSGPPPTS*LHLLTL
Trigger: CAGCGTTAGCAAATGCAGCAAGCTGGTGGGCGGAGG...CCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CAA 90 bp TTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGACCCCTCCGCCCACCAGCTaGCTGCATTTGCTAACGCTG +
Preference number: 5 (lower is better)
Translates to: LRICLSLEIPTTFPSSGTPPPTS*LHLLTL
Trigger: CAGCGTTAGCAAATGCAGCAAGCTGGTGGGCGGAGG...GGTCCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CAA 90 bp TCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTGGTCGGTGTGGGAGGTaGTATTATAGGCCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: SLALQSMFQLPSTEFGPPGRCGR*YYRPAV
Trigger: CACTGCTGGCCTATAATACAACCTCCCACACCGACC...AGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp ATATGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTATTCTTACTGATCGTTaGTGCCCCTCCAAGGGGAGG +
Preference number: 5 (lower is better)
Translates to: ICPVESKASSKCAGWASAILTDR*CPSKGR
Trigger: CCTCCCCTTGGAGGGGCACAAACGATCAGTAAGAAT...AGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp GGTCAGCTGAGTGCATACTGTCCACTGAGAGGGATTCTGCAATGCCCTTGGCGTGCTTCCCACCTCTATTaGTCACTAAATCTCAAACCA +
Preference number: 5 (lower is better)
Translates to: GQLSAYCPLRGILQCPWRASHLY*SLNLKP
Trigger: TGGTTTGAGATTTAGTGACAAATAGAGGTGGGAAGC...ACGCCAAGGGCATTGCAGAATCCCTCTCAGTGGACAGTATGCACTCAGCTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp GTCCATATAGCTGTTGTAGTTCATGGGGTTGGACTCGCCTCCGCCCACCAGCTTAACTGTACCAGTGCTTaGCTTTCTCATAAGTCAGTG +
Preference number: 5 (lower is better)
Translates to: VHIAVVVHGVGLASAHQLNCTSA*LSHKSV
Trigger: CACTGACTTATGAGAAAGCAAAGCACTGGTACAGTT...AAGCTGGTGGGCGGAGGCGAGTCCAACCCCATGAACTACAACAGCTATATGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429175.7
CDS-3UTR CAA 90 bp ACAGTAAGTTGCCTTCTGATTGGTTGGCCCTGGTCTGATGGTCTGACAAGCGCAATAGACCAGCTCGCTTaGCTCCAGTCCTTACATACA +
Preference number: 5 (lower is better)
Translates to: TVSCLLIGWPWSDGLTSAIDQLA*LQSLHT
Trigger: TGTATGTAAGGACTGGAGCAAAGCGAGCTGGTCTAT...TGCGCTTGTCAGACCATCAGACCAGGGCCAACCAATCAGAAGGCAACTTACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CAA 90 bp ACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTTGGTCATACTCCCGCTaGACGTTGACCCTCACTGGC +
Preference number: 5 (lower is better)
Translates to: TSAQHLRICLSLEIPTTFWSYSR*TLTLTG
Trigger: GCCAGTGAGGGTCAACGTCAAGCGGGAGTATGACCA...AAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp AAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCACCAGCTTGCTGCATTaGCTAACGCTGCAGTCCACC +
Preference number: 5 (lower is better)
Translates to: KRTALANLLEFRNPYNFSTSLLH*LTLQST
Trigger: GGTGGACTGCAGCGTTAGCAAATGCAGCAAGCTGGT...GGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CAA 90 bp ACAGTAAGTTGCCTTCTGATTGGTTGGCCCTGGTCTGATGGTCTGACAAGCGCAAGGGGAGGACTTTTGTaGAGGCCAGAATTCATGTTA +
Preference number: 5 (lower is better)
Translates to: TVSCLLIGWPWSDGLTSARGGLL*RPEFML
Trigger: TAACATGAATTCTGGCCTCAACAAAAGTCCTCCCCT...TGCGCTTGTCAGACCATCAGACCAGGGCCAACCAATCAGAAGGCAACTTACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp AAACTGGAGACAAATGTTCCGAAACACATCCCATTTCATTTAGGTAGACATGTTTGCCCGCTTCCAGGGTaGGCTAGGCGACTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: KLETNVPKHIPFHLGRHVCPLPG*ARRLLV
Trigger: GACCAGCAGTCGCCTAGCCAACCCTGGAAGCGGGCA...AACATGTCTACCTAAATGAAATGGGATGTGTTTCGGAACATTTGTCTCCAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CAA 90 bp CTGATACGGATCTGGCTGGGGCCGTTGCTCTGTATTCTTACTGATCGTTTGTGCTCCATCAAATTCCAGTaGGGTGAAAACTTCACTGGC +
Preference number: 5 (lower is better)
Translates to: LIRIWLGPLLCILTDRLCSIKFQ*GENFTG
Trigger: GCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA...GCACAAACGATCAGTAAGAATACAGAGCAACGGCCCCAGCCAGATCCGTATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
CDS TCA 90 bp GCATCACAGATCTGTATTGCTTCTTGCATGGTTTCTGGCTTAGTCTaGCTGGTGTCCTCATTACTCTTCTGTCTCCCCACAACCCACCAT +
Preference number: 5 (lower is better)
Translates to: ASQICIASCMVSGLV*LVSSLLFCLPTTHH
Trigger: ATGGTGGGTTGTGGGGAGACAGAAGAGTAATGAGGACACCAGTCAGACTAAGCCAGAAACCATGCAAGAAGCAATACAGATCTGTGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS-3UTR CAA 90 bp TGTTACACGCATTTCCAAAGCATTAAAGATCTAAATGGATTATCTTTTCCCTGCTGTGGTGGGAGGGGGTaGATCTTGTGGGGCTGCCCG +
Preference number: 5 (lower is better)
Translates to: CYTHFQSIKDLNGLSFPCCGGRG*ILWGCP
Trigger: CGGGCAGCCCCACAAGATCAACCCCCTCCCACCACA...GCAGGGAAAAGATAATCCATTTAGATCTTTAATGCTTTGGAAATGCGTGTAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp GACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTATGACTCTCCTCTCGTaGGTGGTCATGTTGGGAGGA +
Preference number: 5 (lower is better)
Translates to: DKRTALANLLEFRNPYNFMTLLS*VVMLGG
Trigger: TCCTCCCAACATGACCACCAACGAGAGGAGAGTCAT...AAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CAA 90 bp ATATGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTCGGAGGAAGTCCTCCTaGTTCATTTTACACAGTTCC +
Preference number: 5 (lower is better)
Translates to: ICPVESKASSKCAGWASARRKSS*FILHSS
Trigger: GGAACTGTGTAAAATGAACAAGGAGGACTTCCTCCG...AGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CAA 90 bp CACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTGGTCGGTGTGGGAGGTaGTATTATAGGCCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: HTNLLSIKFQLGENFTGLGRCGR*YYRPAV
Trigger: CACTGCTGGCCTATAATACAACCTCCCACACCGACC...AAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp TGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTAAAAGGTCGGTGTGGGAGGTaGTATTATAGGCCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: WPYNQCSSCHPLNLVLLKGRCGR*YYRPAV
Trigger: CACTGCTGGCCTATAATACAACCTCCCACACCGACC...TTTTAGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp TCCATGATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTGGTCGGTGTGGGAGGTaGTATTATAGGCCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: SMILCHTEPRVLTRNCFGGRCGR*YYRPAV
Trigger: CACTGCTGGCCTATAATACAACCTCCCACACCGACC...ACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAATCATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp TCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTCCAAGGGGAGGACTTTaGTTGAGGCCAGAATTCATG +
Preference number: 5 (lower is better)
Translates to: SLALQSMFQLPSTEFGPPPRGGL*LRPEFM
Trigger: CATGAATTCTGGCCTCAACAAAAGTCCTCCCCTTGG...AGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp GACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTATTCTTACTGATCGTTaGTGCCCCTCCAAGGGGAGG +
Preference number: 5 (lower is better)
Translates to: DKRTALANLLEFRNPYNFILTDR*CPSKGR
Trigger: CCTCCCCTTGGAGGGGCACAAACGATCAGTAAGAAT...AAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp AGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTATTCTTACTGATCGTTaGTGCCCCTCCAAGGGGAGG +
Preference number: 5 (lower is better)
Translates to: SWVKTSLALQSMFQLPSTILTDR*CPSKGR
Trigger: CCTCCCCTTGGAGGGGCACAAACGATCAGTAAGAAT...AGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp CTGACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTATCTGGCTGGGGCCGTaGCTCTGTATTCTTACTGAT +
Preference number: 5 (lower is better)
Translates to: LTSAQHLRICLSLEIPTTIWLGP*LCILTD
Trigger: ATCAGTAAGAATACAGAGCAACGGCCCCAGCCAGAT...AGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp GGTCAGCTGAGTGCATACTGTCCACTGAGAGGGATTCTGCAATGCCCTTGGCGTCTTTTGCCGTGCACTTaGGTCATAATGTTTTTATCA +
Preference number: 5 (lower is better)
Translates to: GQLSAYCPLRGILQCPWRLLPCT*VIMFLS
Trigger: TGATAAAAACATTATGACCAAAGTGCACGGCAAAAG...ACGCCAAGGGCATTGCAGAATCCCTCTCAGTGGACAGTATGCACTCAGCTGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp CTGACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTATGTCAGAAGGGTACTaGTACATGGACGACTCGGTC +
Preference number: 5 (lower is better)
Translates to: LTSAQHLRICLSLEIPTTMSEGY*YMDDSV
Trigger: GACCGAGTCGTCCATGTACAAGTACCCTTCTGACAT...AGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp TCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTATGTCAGAAGGGTACTaGTACATGGACGACTCGGTC +
Preference number: 5 (lower is better)
Translates to: SLALQSMFQLPSTEFGPPMSEGY*YMDDSV
Trigger: GACCGAGTCGTCCATGTACAAGTACCCTTCTGACAT...AGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS TCA 90 bp CTCAAAAAGCAGGGAAACAAATGCTTGCTGCTCTCCTGTGTCTCATaGTCCTGTTCTCCAATCCTGTCCTCAGAAACATGCTTTCCTCCA +
Preference number: 5 (lower is better)
Translates to: LKKQGNKCLLLSCVS*SCSPILSSETCFPP
Trigger: TGGAGGAAAGCATGTTTCTGAGGACAGGATTGGAGAACAGGATCATGAGACACAGGAGAGCAGCAAGCATTTGTTTCCCTGCTTTTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS GCA 90 bp CACCCCTTCCATTCCCATGATCACTTCTGCATCACAGATCTGTATTaGTTCTTGCATGGTTTCTGGCTTAGTCTGACTGGTGTCCTCATT +
Preference number: 5 (lower is better)
Translates to: HPFHSHDHFCITDLY*FLHGFWLSLTGVLI
Trigger: AATGAGGACACCAGTCAGACTAAGCCAGAAACCATGCAAGAAGCAATACAGATCTGTGATGCAGAAGTGATCATGGGAATGGAAGGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS CCA 90 bp GATCACTTCTGCATCACAGATCTGTATTGCTTCTTGCATGGTTTCTaGCTTAGTCTGACTGGTGTCCTCATTACTCTTCTGTCTCCCCAC +
Preference number: 5 (lower is better)
Translates to: DHFCITDLYCFLHGF*LSLTGVLITLLSPH
Trigger: GTGGGGAGACAGAAGAGTAATGAGGACACCAGTCAGACTAAGCCAGAAACCATGCAAGAAGCAATACAGATCTGTGATGCAGAAGTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS-3UTR CAA 90 bp CTTGGCGTCTTAAACACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAAATAGTCCCGTCCATTaGGCCAAGTCTGCAGCCGAG +
Preference number: 5 (lower is better)
Translates to: LGVLNTQTFFPSNSSWVKNSPVH*AKSAAE
Trigger: CTCGGCTGCAGACTTGGCCAAATGGACGGGACTATT...TTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTGTTTAAGACGCCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CAA 90 bp TTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTGGTCATACTCCCGCTaGACGTTGACCCTCACTGGC +
Preference number: 5 (lower is better)
Translates to: FFPSNSSWVKTSLALQSMWSYSR*TLTLTG
Trigger: GCCAGTGAGGGTCAACGTCAAGCGGGAGTATGACCA...CATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp GTCCTTACATACAGGTTTATCCATGGCCTTAGCTGCTGTTTTATAAAACCCTTTTGGTCATACTCCCGCTaGACGTTGACCCTCACTGGC +
Preference number: 5 (lower is better)
Translates to: VLTYRFIHGLSCCFIKPFWSYSR*TLTLTG
Trigger: GCCAGTGAGGGTCAACGTCAAGCGGGAGTATGACCA...AAAGGGTTTTATAAAACAGCAGCTAAGGCCATGGATAAACCTGTATGTAAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CAA 90 bp CACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGATGACTCTCCTCTCGTaGGTGGTCATGTTGGGAGGA +
Preference number: 5 (lower is better)
Translates to: HLRICLSLEIPTTFPSSGMTLLS*VVMLGG
Trigger: TCCTCCCAACATGACCACCAACGAGAGGAGAGTCAT...CCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CAA 90 bp CACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTATGACTCTCCTCTCGTaGGTGGTCATGTTGGGAGGA +
Preference number: 5 (lower is better)
Translates to: HTNLLSIKFQLGENFTGLMTLLS*VVMLGG
Trigger: TCCTCCCAACATGACCACCAACGAGAGGAGAGTCAT...AAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CAA 90 bp GCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCCCAAGGGGAGGACTTTaGTTGAGGCCAGAATTCATG +
Preference number: 5 (lower is better)
Translates to: ARRLRIQTGILAHGIIHLPRGGL*LRPEFM
Trigger: CATGAATTCTGGCCTCAACAAAAGTCCTCCCCTTGG...GAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp AAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCATCTGGCTGGGGCCGTaGCTCTGTATTCTTACTGAT +
Preference number: 5 (lower is better)
Translates to: KRTALANLLEFRNPYNFSIWLGP*LCILTD
Trigger: ATCAGTAAGAATACAGAGCAACGGCCCCAGCCAGAT...GGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp GACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTATCTGGCTGGGGCCGTaGCTCTGTATTCTTACTGAT +
Preference number: 5 (lower is better)
Translates to: DKRTALANLLEFRNPYNFIWLGP*LCILTD
Trigger: ATCAGTAAGAATACAGAGCAACGGCCCCAGCCAGAT...AAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp AAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCATGTCAGAAGGGTACTaGTACATGGACGACTCGGTC +
Preference number: 5 (lower is better)
Translates to: KRTALANLLEFRNPYNFSMSEGY*YMDDSV
Trigger: GACCGAGTCGTCCATGTACAAGTACCCTTCTGACAT...GGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp CTGACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTGCCACATATGTCCTGTaGAGTCCAAAGCATCCAGTA +
Preference number: 5 (lower is better)
Translates to: LTSAQHLRICLSLEIPTTATYVL*SPKHPV
Trigger: TACTGGATGCTTTGGACTCAACAGGACATATGTGGC...AGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp TGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTAGAAACTGTACCAGTGCTTaGCTTTCTCATAAGTCAGTG +
Preference number: 5 (lower is better)
Translates to: CPVESKASSKCAGWASARNCTSA*LSHKSV
Trigger: CACTGACTTATGAGAAAGCAAAGCACTGGTACAGTT...TCTAGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp TGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTAGATGTGAGTCTAATTCCTaGCAAATCAAGGACTTCCCA +
Preference number: 5 (lower is better)
Translates to: CPVESKASSKCAGWASARCESNS*QIKDFP
Trigger: TGGGAAGTCCTTGATTTGCAAGGAATTAGACTCACA...TCTAGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS CCA 90 bp AACATTTACCTAGAATCTACTATGTGCTGGCCCTGTTCTCCAGGCTaGAGATTCAGGAATGAACAAGCAGTTCCTGGTAGAACTCGCATT +
Preference number: 5 (lower is better)
Translates to: NIYLESTMCWPCSPG*RFRNEQAVPGRTRI
Trigger: AATGCGAGTTCTACCAGGAACTGCTTGTTCATTCCTGAATCTCCAGCCTGGAGAACAGGGCCAGCACATAGTAGATTCTAGGTAAATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS-3UTR CAA 90 bp AAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCCAATATTCCACACATaGACCCGGTTACAGCCTGAC +
Preference number: 5 (lower is better)
Translates to: KLHWPYNQCSSCHPLNLVPIFHT*TRLQPD
Trigger: GTCAGGCTGTAACCGGGTCAATGTGTGGAATATTGG...GACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CAA 90 bp TTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGACCAGCTTGCTGCATTaGCTAACGCTGCAGTCCACC +
Preference number: 5 (lower is better)
Translates to: FFPSNSSWVKTSLALQSMTSLLH*LTLQST
Trigger: GGTGGACTGCAGCGTTAGCAAATGCAGCAAGCTGGT...CATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CAA 90 bp GCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCCGGAGGAAGTCCTCCTaGTTCATTTTACACAGTTCC +
Preference number: 5 (lower is better)
Translates to: ARRLRIQTGILAHGIIHLRRKSS*FILHSS
Trigger: GGAACTGTGTAAAATGAACAAGGAGGACTTCCTCCG...GAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CAA 90 bp TCCATGATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTATCTGGCTGGGGCCGTaGCTCTGTATTCTTACTGAT +
Preference number: 5 (lower is better)
Translates to: SMILCHTEPRVLTRNCFGIWLGP*LCILTD
Trigger: ATCAGTAAGAATACAGAGCAACGGCCCCAGCCAGAT...ACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAATCATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp CACACAAACCTTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTATGTCAGAAGGGTACTaGTACATGGACGACTCGGTC +
Preference number: 5 (lower is better)
Translates to: HTNLLSIKFQLGENFTGLMSEGY*YMDDSV
Trigger: GACCGAGTCGTCCATGTACAAGTACCCTTCTGACAT...AAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAAGGTTTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp AAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCATGTCAGAAGGGTACTaGTACATGGACGACTCGGTC +
Preference number: 5 (lower is better)
Translates to: KLHWPYNQCSSCHPLNLVMSEGY*YMDDSV
Trigger: GACCGAGTCGTCCATGTACAAGTACCCTTCTGACAT...GACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp GACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTGCCACATATGTCCTGTaGAGTCCAAAGCATCCAGTA +
Preference number: 5 (lower is better)
Translates to: DKRTALANLLEFRNPYNFATYVL*SPKHPV
Trigger: TACTGGATGCTTTGGACTCAACAGGACATATGTGGC...AAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp ATATGTCCTGTTGAGTCCAAAGCATCCAGTAAGTGTGCAGGATGGGCTTCAGCTCACTTGCGAATCTGCTaGAGTTTAGAAATCCCTACA +
Preference number: 5 (lower is better)
Translates to: ICPVESKASSKCAGWASAHLRIC*SLEIPT
Trigger: TGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG...AGCTGAAGCCCATCCTGCACACTTACTGGATGCTTTGGACTCAACAGGACATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp GCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCACAAGCGCACAGCACTaGCGAATCTGCTTGAGTTTA +
Preference number: 5 (lower is better)
Translates to: ARRLRIQTGILAHGIIHLTSAQH*RICLSL
Trigger: TAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGT...GAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp GACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTACAAGCGCACAGCACTaGCGAATCTGCTTGAGTTTA +
Preference number: 5 (lower is better)
Translates to: DKRTALANLLEFRNPYNFTSAQH*RICLSL
Trigger: TAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGT...AAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp AGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTATAGACCAGCTCGCTTaGCTCCAGTCCTTACATACA +
Preference number: 5 (lower is better)
Translates to: SWVKTSLALQSMFQLPSTIDQLA*LQSLHT
Trigger: TGTATGTAAGGACTGGAGCAAAGCGAGCTGGTCTAT...AGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS TCA 90 bp TTGCTTCCTAGGCATGGCAAGTTTGATTTCTGGTACAGGAGTTCATaGGTCATTCTTGCCCCTTATTCTCTTACTGGGGGATATTGGGTA +
Preference number: 5 (lower is better)
Translates to: LLPRHGKFDFWYRSS*VILAPYSLTGGYWV
Trigger: TACCCAATATCCCCCAGTAAGAGAATAAGGGGCAAGAATGACTCATGAACTCCTGTACCAGAAATCAAACTTGCCATGCCTAGGAAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS-3UTR CAA 90 bp AAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAGGGGAGGACTTTTGTaGAGGCCAGAATTCATGTTA +
Preference number: 5 (lower is better)
Translates to: KRTALANLLEFRNPYNFSRGGLL*RPEFML
Trigger: TAACATGAATTCTGGCCTCAACAAAAGTCCTCCCCT...GGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp TCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCACCAAGGGGAGGACTTTaGTTGAGGCCAGAATTCATG +
Preference number: 5 (lower is better)
Translates to: SIKFQLGENFTGLTINVPPRGGL*LRPEFM
Trigger: CATGAATTCTGGCCTCAACAAAAGTCCTCCCCTTGG...TGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp GACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTACTGAACCCCGTGTATaGACAAGAAACTGCTTTGGT +
Preference number: 5 (lower is better)
Translates to: DKRTALANLLEFRNPYNFTEPRV*TRNCFG
Trigger: ACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGT...AAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp ATCCAGTTTTGTCTTCCCTTCAAGGCCACATATGTCCTGTTGAGTCCAAAGCATTCCATCAAATTCCAGTaGGGTGAAAACTTCACTGGC +
Preference number: 5 (lower is better)
Translates to: IQFCLPFKATYVLLSPKHSIKFQ*GENFTG
Trigger: GCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA...ATGCTTTGGACTCAACAGGACATATGTGGCCTTGAAGGGAAGACAAAACTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp CACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGACAAGCGCACAGCACTaGCGAATCTGCTTGAGTTTA +
Preference number: 5 (lower is better)
Translates to: HLRICLSLEIPTTFPSSGTSAQH*RICLSL
Trigger: TAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGT...CCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp AAGTGTGCAGGATGGGCTTCAGCTAGAAGGCCACTGATGAGTAAGCTTCTAGTAAATTTATACAGTAAGTaGCCTTCTGATTGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: KCAGWASARRPLMSKLLVNLYSK*PSDWLA
Trigger: GGCCAACCAATCAGAAGGCAACTTACTGTATAAATT...TACTAGAAGCTTACTCATCAGTGGCCTTCTAGCTGAAGCCCATCCTGCACACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429175.7
ENST00000608303.5
CDS-3UTR CAA 90 bp TTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGCCAATATTCCACACATaGACCCGGTTACAGCCTGAC +
Preference number: 5 (lower is better)
Translates to: FFPSNSSWVKTSLALQSMPIFHT*TRLQPD
Trigger: GTCAGGCTGTAACCGGGTCAATGTGTGGAATATTGG...CATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CAA 90 bp ATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTCATAAACCAATATTCCACACATaGACCCGGTTACAGCCTGAC +
Preference number: 5 (lower is better)
Translates to: ILCHTEPRVLTRNCFGHKPIFHT*TRLQPD
Trigger: GTCAGGCTGTAACCGGGTCAATGTGTGGAATATTGG...TTTATGACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CAA 90 bp TGTTACACGCATTTCCAAAGCATTAAAGATCTAAATGGATTATCTTTTCCCTGCACCAGCTTGCTGCATTaGCTAACGCTGCAGTCCACC +
Preference number: 5 (lower is better)
Translates to: CYTHFQSIKDLNGLSFPCTSLLH*LTLQST
Trigger: GGTGGACTGCAGCGTTAGCAAATGCAGCAAGCTGGT...GCAGGGAAAAGATAATCCATTTAGATCTTTAATGCTTTGGAAATGCGTGTAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CAA 90 bp TCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCACCAGAATTCATGTTATaGCCCCAAGCTCCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: SIKFQLGENFTGLTINVPPEFML*PQAPLL
Trigger: CAGAAGAGGAGCTTGGGGCAATAACATGAATTCTGG...TGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp AAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCAGGGGAGGACTTTTGTaGAGGCCAGAATTCATGTTA +
Preference number: 5 (lower is better)
Translates to: KLHWPYNQCSSCHPLNLVRGGLL*RPEFML
Trigger: TAACATGAATTCTGGCCTCAACAAAAGTCCTCCCCT...GACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp ACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCTTTGTTCACCAAGGGGAGGACTTTaGTTGAGGCCAGAATTCATG +
Preference number: 5 (lower is better)
Translates to: TENSNWHTGPWNYSSLCSPRGGL*LRPEFM
Trigger: CATGAATTCTGGCCTCAACAAAAGTCCTCCCCTTGG...TGAACAAAGAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp AAACTGGAGACAAATGTTCCGAAACACATCCCATTTCATTTAGGTAGACATGTTATTCTTACTGATCGTTaGTGCCCCTCCAAGGGGAGG +
Preference number: 5 (lower is better)
Translates to: KLETNVPKHIPFHLGRHVILTDR*CPSKGR
Trigger: CCTCCCCTTGGAGGGGCACAAACGATCAGTAAGAAT...AACATGTCTACCTAAATGAAATGGGATGTGTTTCGGAACATTTGTCTCCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CAA 90 bp ATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTCATAAAATGTCAGAAGGGTACTaGTACATGGACGACTCGGTC +
Preference number: 5 (lower is better)
Translates to: ILCHTEPRVLTRNCFGHKMSEGY*YMDDSV
Trigger: GACCGAGTCGTCCATGTACAAGTACCCTTCTGACAT...TTTATGACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp TCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAGCCACATATGTCCTGTaGAGTCCAAAGCATCCAGTA +
Preference number: 5 (lower is better)
Translates to: SIKFQLGENFTGLTINVPATYVL*SPKHPV
Trigger: TACTGGATGCTTTGGACTCAACAGGACATATGTGGC...TGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp AGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGCTTCCCACCTCTATTaGTCACTAAATCTCAAACCA +
Preference number: 5 (lower is better)
Translates to: SWVKTSLALQSMFQLPSTASHLY*SLNLKP
Trigger: TGGTTTGAGATTTAGTGACAAATAGAGGTGGGAAGC...AGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp ACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTTCCATCAAATTCCAGTaGGGTGAAAACTTCACTGGC +
Preference number: 5 (lower is better)
Translates to: TSAQHLRICLSLEIPTTFSIKFQ*GENFTG
Trigger: GCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA...AAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp AAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCTCCATCAAATTCCAGTaGGGTGAAAACTTCACTGGC +
Preference number: 5 (lower is better)
Translates to: KLHWPYNQCSSCHPLNLVSIKFQ*GENFTG
Trigger: GCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA...GACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp TCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTAATTTATACAGTAAGTaGCCTTCTGATTGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: SLALQSMFQLPSTEFGPPNLYSK*PSDWLA
Trigger: GGCCAACCAATCAGAAGGCAACTTACTGTATAAATT...AGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp CTGACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTACAACATGGTCTTCTTaGACAGTTGTCAGCTTAACA +
Preference number: 5 (lower is better)
Translates to: LTSAQHLRICLSLEIPTTTTWSS*TVVSLT
Trigger: TGTTAAGCTGACAACTGTCAAAGAAGACCATGTTGT...AGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp TCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAATAGACCAGCTCGCTTaGCTCCAGTCCTTACATACA +
Preference number: 5 (lower is better)
Translates to: SIKFQLGENFTGLTINVPIDQLA*LQSLHT
Trigger: TGTATGTAAGGACTGGAGCAAAGCGAGCTGGTCTAT...TGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CAA 90 bp AAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCTGTGAGTCTAATTCCTaGCAAATCAAGGACTTCCCA +
Preference number: 5 (lower is better)
Translates to: KRTALANLLEFRNPYNFSCESNS*QIKDFP
Trigger: TGGGAAGTCCTTGATTTGCAAGGAATTAGACTCACA...GGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS TCA 90 bp TGTGTGCTTGATTTCTCTCTCCCGCTTATGGGACCAGTGCATGTCTaGTTCATCTTTGTGAATCTTATATTGCCAAATGTCATGTGCAGA +
Preference number: 5 (lower is better)
Translates to: CVLDFSLPLMGPVHV*FIFVNLILPNVMCR
Trigger: TCTGCACATGACATTTGGCAATATAAGATTCACAAAGATGAATCAGACATGCACTGGTCCCATAAGCGGGAGAGAGAAATCAAGCACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS TCA 90 bp TTTCATTTTCAAATCGGAAAGTTAGAGAAGTCCTTACTGAGAAAGTaGCATCTGAGCAAAGATCAGCTGCTTCCTGGTGTCCCTGTCTTG +
Preference number: 5 (lower is better)
Translates to: FHFQIGKLEKSLLRK*HLSKDQLLPGVPVL
Trigger: CAAGACAGGGACACCAGGAAGCAGCTGATCTTTGCTCAGATGTCACTTTCTCAGTAAGGACTTCTCTAACTTTCCGATTTGAAAATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS GCA 90 bp AATAATTTTGATGTCTACTCAAAAAGCAGGGAAACAAATGCTTGCTaGTCTCCTGTGTCTCATGATCCTGTTCTCCAATCCTGTCCTCAG +
Preference number: 5 (lower is better)
Translates to: NNFDVYSKSRETNAC*SPVSHDPVLQSCPQ
Trigger: CTGAGGACAGGATTGGAGAACAGGATCATGAGACACAGGAGAGCAGCAAGCATTTGTTTCCCTGCTTTTTGAGTAGACATCAAAATTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS-3UTR CAA 90 bp TTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGCCAGAATTCATGTTATaGCCCCAAGCTCCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: FFPSNSSWVKTSLALQSMPEFML*PQAPLL
Trigger: CAGAAGAGGAGCTTGGGGCAATAACATGAATTCTGG...CATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp TGTTACACGCATTTCCAAAGCATTAAAGATCTAAATGGATTATCTTTTCCCTGCATTCTTACTGATCGTTaGTGCCCCTCCAAGGGGAGG +
Preference number: 5 (lower is better)
Translates to: CYTHFQSIKDLNGLSFPCILTDR*CPSKGR
Trigger: CCTCCCCTTGGAGGGGCACAAACGATCAGTAAGAAT...GCAGGGAAAAGATAATCCATTTAGATCTTTAATGCTTTGGAAATGCGTGTAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp CTGACAAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTCTTTTGCCGTGCACTTaGGTCATAATGTTTTTATCA +
Preference number: 5 (lower is better)
Translates to: LTSAQHLRICLSLEIPTTLLPCT*VIMFLS
Trigger: TGATAAAAACATTATGACCAAAGTGCACGGCAAAAG...AGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp CTTCTGCTGTACTGCAGTAGGTACATTCGAAAAATTCTTGATAGTGCAAGAAGTGCCACATATGTCCTGTaGAGTCCAAAGCATCCAGTA +
Preference number: 5 (lower is better)
Translates to: LLLYCSRYIRKILDSARSATYVL*SPKHPV
Trigger: TACTGGATGCTTTGGACTCAACAGGACATATGTGGC...ACTTCTTGCACTATCAAGAATTTTTCGAATGTACCTACTGCAGTACAGCAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CAA 90 bp AAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCGCTTCCCACCTCTATTaGTCACTAAATCTCAAACCA +
Preference number: 5 (lower is better)
Translates to: KLHWPYNQCSSCHPLNLVASHLY*SLNLKP
Trigger: TGGTTTGAGATTTAGTGACAAATAGAGGTGGGAAGC...GACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp AAGCGCACAGCACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCTGCCATCCACTGAATTaGGTCCTCCTAAAATTAGAT +
Preference number: 5 (lower is better)
Translates to: KRTALANLLEFRNPYNFSCHPLN*VLLKLD
Trigger: ATCTAATTTTAGGAGGACCAAATTCAGTGGATGGCA...GGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp TGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTAAAACAATCAATGTTCCAGTaGCCATCCACTGAATTTGGT +
Preference number: 5 (lower is better)
Translates to: WPYNQCSSCHPLNLVLLKQSMFQ*PSTEFG
Trigger: ACCAAATTCAGTGGATGGCAACTGGAACATTGATTG...TTTTAGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp TTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGACCCACTTGCGAATCTGCTaGAGTTTAGAAATCCCTACA +
Preference number: 5 (lower is better)
Translates to: LRICLSLEIPTTFPSSGTHLRIC*SLEIPT
Trigger: TGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG...GGTCCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp ACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCTTTGTTCAACAAGCGCACAGCACTaGCGAATCTGCTTGAGTTTA +
Preference number: 5 (lower is better)
Translates to: TENSNWHTGPWNYSSLCSTSAQH*RICLSL
Trigger: TAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGT...TGAACAAAGAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp ATCCAGTTTTGTCTTCCCTTCAAGGCCACATATGTCCTGTTGAGTCCAAAGCATAATTTATACAGTAAGTaGCCTTCTGATTGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: IQFCLPFKATYVLLSPKHNLYSK*PSDWLA
Trigger: GGCCAACCAATCAGAAGGCAACTTACTGTATAAATT...ATGCTTTGGACTCAACAGGACATATGTGGCCTTGAAGGGAAGACAAAACTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp AGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTACAACATGGTCTTCTTaGACAGTTGTCAGCTTAACA +
Preference number: 5 (lower is better)
Translates to: SWVKTSLALQSMFQLPSTTTWSS*TVVSLT
Trigger: TGTTAAGCTGACAACTGTCAAAGAAGACCATGTTGT...AGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp GCTAGGAGACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCACAACATGGTCTTCTTaGACAGTTGTCAGCTTAACA +
Preference number: 5 (lower is better)
Translates to: ARRLRIQTGILAHGIIHLTTWSS*TVVSLT
Trigger: TGTTAAGCTGACAACTGTCAAAGAAGACCATGTTGT...GAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGTCTCCTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp CTTCTGCTGTACTGCAGTAGGTACATTCGAAAAATTCTTGATAGTGCAAGAAGTATAGACCAGCTCGCTTaGCTCCAGTCCTTACATACA +
Preference number: 5 (lower is better)
Translates to: LLLYCSRYIRKILDSARSIDQLA*LQSLHT
Trigger: TGTATGTAAGGACTGGAGCAAAGCGAGCTGGTCTAT...ACTTCTTGCACTATCAAGAATTTTTCGAATGTACCTACTGCAGTACAGCAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CAA 90 bp CACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGTGTGAGTCTAATTCCTaGCAAATCAAGGACTTCCCA +
Preference number: 5 (lower is better)
Translates to: HLRICLSLEIPTTFPSSGCESNS*QIKDFP
Trigger: TGGGAAGTCCTTGATTTGCAAGGAATTAGACTCACA...CCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CAA 90 bp AAACTGGAGACAAATGTTCCGAAACACATCCCATTTCATTTAGGTAGACATGTTCCAGAATTCATGTTATaGCCCCAAGCTCCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: KLETNVPKHIPFHLGRHVPEFML*PQAPLL
Trigger: CAGAAGAGGAGCTTGGGGCAATAACATGAATTCTGG...AACATGTCTACCTAAATGAAATGGGATGTGTTTCGGAACATTTGTCTCCAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CAA 90 bp ATCCAGTTTTGTCTTCCCTTCAAGGCCACATATGTCCTGTTGAGTCCAAAGCATCTTTTGCCGTGCACTTaGGTCATAATGTTTTTATCA +
Preference number: 5 (lower is better)
Translates to: IQFCLPFKATYVLLSPKHLLPCT*VIMFLS
Trigger: TGATAAAAACATTATGACCAAAGTGCACGGCAAAAG...ATGCTTTGGACTCAACAGGACATATGTGGCCTTGAAGGGAAGACAAAACTGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp CTTCTGCTGTACTGCAGTAGGTACATTCGAAAAATTCTTGATAGTGCAAGAAGTACTGAACCCCGTGTATaGACAAGAAACTGCTTTGGT +
Preference number: 5 (lower is better)
Translates to: LLLYCSRYIRKILDSARSTEPRV*TRNCFG
Trigger: ACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGT...ACTTCTTGCACTATCAAGAATTTTTCGAATGTACCTACTGCAGTACAGCAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CAA 90 bp TCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTTCCAGCTTCCCACCTCTATTaGTCACTAAATCTCAAACCA +
Preference number: 5 (lower is better)
Translates to: SIKFQLGENFTGLTINVPASHLY*SLNLKP
Trigger: TGGTTTGAGATTTAGTGACAAATAGAGGTGGGAAGC...TGGAACATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp TTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGACCTGCCATCCACTGAATTaGGTCCTCCTAAAATTAGAT +
Preference number: 5 (lower is better)
Translates to: LRICLSLEIPTTFPSSGTCHPLN*VLLKLD
Trigger: ATCTAATTTTAGGAGGACCAAATTCAGTGGATGGCA...GGTCCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp TTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTCCATCAAATTCCAGTaGGGTGAAAACTTCACTGGC +
Preference number: 5 (lower is better)
Translates to: FFPSNSSWVKTSLALQSMSIKFQ*GENFTG
Trigger: GCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGA...CATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp AAACTGGAGACAAATGTTCCGAAACACATCCCATTTCATTTAGGTAGACATGTTACAAGCGCACAGCACTaGCGAATCTGCTTGAGTTTA +
Preference number: 5 (lower is better)
Translates to: KLETNVPKHIPFHLGRHVTSAQH*RICLSL
Trigger: TAAACTCAAGCAGATTCGCAAGTGCTGTGCGCTTGT...AACATGTCTACCTAAATGAAATGGGATGTGTTTCGGAACATTTGTCTCCAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CAA 90 bp TGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCCTCCTAAAAACAACATGGTCTTCTTaGACAGTTGTCAGCTTAACA +
Preference number: 5 (lower is better)
Translates to: WPYNQCSSCHPLNLVLLKTTWSS*TVVSLT
Trigger: TGTTAAGCTGACAACTGTCAAAGAAGACCATGTTGT...TTTTAGGAGGACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp TCCATGATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTACAACATGGTCTTCTTaGACAGTTGTCAGCTTAACA +
Preference number: 5 (lower is better)
Translates to: SMILCHTEPRVLTRNCFGTTWSS*TVVSLT
Trigger: TGTTAAGCTGACAACTGTCAAAGAAGACCATGTTGT...ACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAATCATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp AAACTTCACTGGCCTTACAATCAATGTTCCAGTTGCCATCCACTGAATTTGGTCACAACATGGTCTTCTTaGACAGTTGTCAGCTTAACA +
Preference number: 5 (lower is better)
Translates to: KLHWPYNQCSSCHPLNLVTTWSS*TVVSLT
Trigger: TGTTAAGCTGACAACTGTCAAAGAAGACCATGTTGT...GACCAAATTCAGTGGATGGCAACTGGAACATTGATTGTAAGGCCAGTGAAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp CACTTGCGAATCTGCTTGAGTTTAGAAATCCCTACAACTTTTCCAAGTTCTGGGCTTTTGCCGTGCACTTaGGTCATAATGTTTTTATCA +
Preference number: 5 (lower is better)
Translates to: HLRICLSLEIPTTFPSSGLLPCT*VIMFLS
Trigger: TGATAAAAACATTATGACCAAAGTGCACGGCAAAAG...CCCAGAACTTGGAAAAGTTGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp TCCATGATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTCTTTTGCCGTGCACTTaGGTCATAATGTTTTTATCA +
Preference number: 5 (lower is better)
Translates to: SMILCHTEPRVLTRNCFGLLPCT*VIMFLS
Trigger: TGATAAAAACATTATGACCAAAGTGCACGGCAAAAG...ACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAATCATGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp CTTCTGCTGTACTGCAGTAGGTACATTCGAAAAATTCTTGATAGTGCAAGAAGTCAATCAATGTTCCAGTaGCCATCCACTGAATTTGGT +
Preference number: 5 (lower is better)
Translates to: LLLYCSRYIRKILDSARSQSMFQ*PSTEFG
Trigger: ACCAAATTCAGTGGATGGCAACTGGAACATTGATTG...ACTTCTTGCACTATCAAGAATTTTTCGAATGTACCTACTGCAGTACAGCAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CAA 90 bp TTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGCAATCAATGTTCCAGTaGCCATCCACTGAATTTGGT +
Preference number: 5 (lower is better)
Translates to: FFPSNSSWVKTSLALQSMQSMFQ*PSTEFG
Trigger: ACCAAATTCAGTGGATGGCAACTGGAACATTGATTG...CATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp TTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGCACTTGCGAATCTGCTaGAGTTTAGAAATCCCTACA +
Preference number: 5 (lower is better)
Translates to: FFPSNSSWVKTSLALQSMHLRIC*SLEIPT
Trigger: TGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG...CATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp ACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCTTTGTTCAAACTGTACCAGTGCTTaGCTTTCTCATAAGTCAGTG +
Preference number: 5 (lower is better)
Translates to: TENSNWHTGPWNYSSLCSNCTSA*LSHKSV
Trigger: CACTGACTTATGAGAAAGCAAAGCACTGGTACAGTT...TGAACAAAGAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp ACTGAGAATTCAAACTGGCATACTGGCCCATGGAATTATTCATCTCTTTGTTCATGTGAGTCTAATTCCTaGCAAATCAAGGACTTCCCA +
Preference number: 5 (lower is better)
Translates to: TENSNWHTGPWNYSSLCSCESNS*QIKDFP
Trigger: TGGGAAGTCCTTGATTTGCAAGGAATTAGACTCACA...TGAACAAAGAGATGAATAATTCCATGGGCCAGTATGCCAGTTTGAATTCTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CAA 90 bp TTCTTTCCATCAAATTCCAGTTGGGTGAAAACTTCACTGGCCTTACAATCAATGTGCCATCCACTGAATTaGGTCCTCCTAAAATTAGAT +
Preference number: 5 (lower is better)
Translates to: FFPSNSSWVKTSLALQSMCHPLN*VLLKLD
Trigger: ATCTAATTTTAGGAGGACCAAATTCAGTGGATGGCA...CATTGATTGTAAGGCCAGTGAAGTTTTCACCCAACTGGAATTTGATGGAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp ATTCTGTGTCATACTGAACCCCGTGTATTGACAAGAAACTGCTTTGGTCATAAATGCCATCCACTGAATTaGGTCCTCCTAAAATTAGAT +
Preference number: 5 (lower is better)
Translates to: ILCHTEPRVLTRNCFGHKCHPLN*VLLKLD
Trigger: ATCTAATTTTAGGAGGACCAAATTCAGTGGATGGCA...TTTATGACCAAAGCAGTTTCTTGTCAATACACGGGGTTCAGTATGACACAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp AAACTGGAGACAAATGTTCCGAAACACATCCCATTTCATTTAGGTAGACATGTTCAATCAATGTTCCAGTaGCCATCCACTGAATTTGGT +
Preference number: 5 (lower is better)
Translates to: KLETNVPKHIPFHLGRHVQSMFQ*PSTEFG
Trigger: ACCAAATTCAGTGGATGGCAACTGGAACATTGATTG...AACATGTCTACCTAAATGAAATGGGATGTGTTTCGGAACATTTGTCTCCAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CAA 90 bp CTTCTGCTGTACTGCAGTAGGTACATTCGAAAAATTCTTGATAGTGCAAGAAGTAATTTATACAGTAAGTaGCCTTCTGATTGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: LLLYCSRYIRKILDSARSNLYSK*PSDWLA
Trigger: GGCCAACCAATCAGAAGGCAACTTACTGTATAAATT...ACTTCTTGCACTATCAAGAATTTTTCGAATGTACCTACTGCAGTACAGCAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CAA 90 bp GTCCTTACATACAGGTTTATCCATGGCCTTAGCTGCTGTTTTATAAAACCCTTTCTTTTGCCGTGCACTTaGGTCATAATGTTTTTATCA +
Preference number: 5 (lower is better)
Translates to: VLTYRFIHGLSCCFIKPFLLPCT*VIMFLS
Trigger: TGATAAAAACATTATGACCAAAGTGCACGGCAAAAG...AAAGGGTTTTATAAAACAGCAGCTAAGGCCATGGATAAACCTGTATGTAAGGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000527786.7
ENST00000534087.3
CDS-3UTR CAA 90 bp TGTTACACGCATTTCCAAAGCATTAAAGATCTAAATGGATTATCTTTTCCCTGCGCTTCCCACCTCTATTaGTCACTAAATCTCAAACCA +
Preference number: 5 (lower is better)
Translates to: CYTHFQSIKDLNGLSFPCASHLY*SLNLKP
Trigger: TGGTTTGAGATTTAGTGACAAATAGAGGTGGGAAGC...GCAGGGAAAAGATAATCCATTTAGATCTTTAATGCTTTGGAAATGCGTGTAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS-3UTR CAA 90 bp TGTTACACGCATTTCCAAAGCATTAAAGATCTAAATGGATTATCTTTTCCCTGCCACTTGCGAATCTGCTaGAGTTTAGAAATCCCTACA +
Preference number: 5 (lower is better)
Translates to: CYTHFQSIKDLNGLSFPCHLRIC*SLEIPT
Trigger: TGTAGGGATTTCTAAACTCAAGCAGATTCGCAAGTG...GCAGGGAAAAGATAATCCATTTAGATCTTTAATGCTTTGGAAATGCGTGTAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527786.7
ENST00000534087.3
ENST00000608303.5
CDS TCA 72 bp ACCGACAGAGCCTCCCGGACCCGACGGCCCAAGCACTaGCTCCCAGGCAAGAGTCGCCCTTCCTGGTCCCCA +
Preference number: 6 (lower is better)
Translates to: TDRASRTRRPKH*LPGKSRPSWSP
Trigger: TGGGGACCAGGAAGGGCGACTCTTGCCTGGGAGTCAGTGCTTGGGCCGTCGGGTCCGGGAGGCTCTGTCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527767.7
CDS CCA 72 bp TGGGCTGCCGCTCCGTACGCTGAGTCAAAGAGGGACTaGTCGTCGCTCACCACCGACAGAGCCTCCCGGACC +
Preference number: 6 (lower is better)
Translates to: WAAAPYAESKRD*SSLTTDRASRT
Trigger: GGTCCGGGAGGCTCTGTCGGTGGTGAGCGACGACCAGTCCCTCTTTGACTCAGCGTACGGAGCGGCAGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527767.7
CDS TCA 72 bp GTCGGCCTTGGGGAGATGGGCTGCCGCTCCGTACGCTaGGTCAAAGAGGGACTGGTCGTCGCTCACCACCGA +
Preference number: 6 (lower is better)
Translates to: VGLGEMGCRSVR*VKEGLVVAHHR
Trigger: TCGGTGGTGAGCGACGACCAGTCCCTCTTTGACTCAGCGTACGGAGCGGCAGCCCATCTCCCCAAGGCCGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527767.7
ENST00000527786.7
ENST00000534087.3
ENST00000608055.1
ENST00000608303.5
CDS CCA 72 bp GGACTCCCCGAGGCAGTCATGTCGGCCTTGGGGAGATaGGCTGCCGCTCCGTACGCTGAGTCAAAGAGGGAC +
Preference number: 6 (lower is better)
Translates to: GLPEAVMSALGR*AAAPYAESKRD
Trigger: GTCCCTCTTTGACTCAGCGTACGGAGCGGCAGCCCATCTCCCCAAGGCCGACATGACTGCCTCGGGGAGTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527767.7
ENST00000527786.7
ENST00000534087.3
ENST00000608055.1
ENST00000608303.5
CDS CCA 72 bp TGGGCTGCCGCTCCGTACGCTGAGTCAAAGAGGGACTaGTCGTCGCTCACCACCGACAGAGCCTCCTGCAGG +
Preference number: 6 (lower is better)
Translates to: WAAAPYAESKRD*SSLTTDRASCR
Trigger: CCTGCAGGAGGCTCTGTCGGTGGTGAGCGACGACCAGTCCCTCTTTGACTCAGCGTACGGAGCGGCAGCCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608055.1
CDS CCA 72 bp CGTAGTCAGGACTCCCCGAGGCAGTCATGTCGGCCTTaGGGAGATGGGCTGCCGCTCCGTACGCTGAGTCAA +
Preference number: 6 (lower is better)
Translates to: RSQDSPRQSCRP*GDGLPLRTLSQ
Trigger: TTGACTCAGCGTACGGAGCGGCAGCCCATCTCCCCAAGGCCGACATGACTGCCTCGGGGAGTCCTGACTACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527767.7
ENST00000527786.7
ENST00000534087.3
ENST00000608055.1
ENST00000608303.5
CDS TCA 72 bp CCAGGCAAGAGTCGCCCTTCCTGGTCCCCAGGGAACTaGCACTACCGCGGGACGTTCCCTCTAGGACAGTCA +
Preference number: 6 (lower is better)
Translates to: PGKSRPSWSPGN*HYRGTFPLGQS
Trigger: TGACTGTCCTAGAGGGAACGTCCCGCGGTAGTGTCAGTTCCCTGGGGACCAGGAAGGGCGACTCTTGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527767.7
CDS CCA 72 bp TGGGCTGCCGCTCCGTACGCTGAGTCAAAGAGGGACTaGTCGTCGCTCACCACCGACAGAGCCTCCTTGATG +
Preference number: 6 (lower is better)
Translates to: WAAAPYAESKRD*SSLTTDRASLM
Trigger: CATCAAGGAGGCTCTGTCGGTGGTGAGCGACGACCAGTCCCTCTTTGACTCAGCGTACGGAGCGGCAGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344954.10
ENST00000608303.5
CDS CAA 72 bp GGGTTGGACTCGCCTCCGCCCACCAGCTTGCTGCATTaGCTAACGCTGCAGTCCACCGGAGACTCCCTGGAT +
Preference number: 6 (lower is better)
Translates to: GLDSPPPTSLLH*LTLQSTGDSLD
Trigger: ATCCAGGGAGTCTCCGGTGGACTGCAGCGTTAGCAAATGCAGCAAGCTGGTGGGCGGAGGCGAGTCCAACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527767.7
ENST00000527786.7
ENST00000534087.3
ENST00000608055.1
CDS CCA 72 bp GACCCTCACTGGCTGATTGATCCACTCCTGCTGTGGTaGGAGGGGGTTGATCTTGTGGGGCTGCCCGTAGTC +
Preference number: 6 (lower is better)
Translates to: DPHWLIDPLLLW*EGVDLVGLPVV
Trigger: GACTACGGGCAGCCCCACAAGATCAACCCCCTCCCACCACAGCAGGAGTGGATCAATCAGCCAGTGAGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527767.7
ENST00000527786.7
ENST00000534087.3
ENST00000608055.1
ENST00000608303.5
CDS CCA 72 bp TGGGCTGCCGCTCCGTACGCTGAGTCAAAGAGGGACTaGTCGTCGCTCACCACCGACAGAGCCTCAATTCCA +
Preference number: 6 (lower is better)
Translates to: WAAAPYAESKRD*SSLTTDRASIP
Trigger: TGGAATTGAGGCTCTGTCGGTGGTGAGCGACGACCAGTCCCTCTTTGACTCAGCGTACGGAGCGGCAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534087.3
CDS CCA 72 bp TGGGCTGCCGCTCCGTACGCTGAGTCAAAGAGGGACTaGTCGTCGCTCACCACCGACAGAGCCTCCTTAATA +
Preference number: 6 (lower is better)
Translates to: WAAAPYAESKRD*SSLTTDRASLI
Trigger: TATTAAGGAGGCTCTGTCGGTGGTGAGCGACGACCAGTCCCTCTTTGACTCAGCGTACGGAGCGGCAGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281428.12
ENST00000429175.7
ENST00000527786.7
CDS CCA 72 bp CATGTGGTCATACTCCCGCTTGACGTTGACCCTCACTaGCTGATTGATCCACTCCTGCTGTGGTGGGAGGGG +
Preference number: 6 (lower is better)
Translates to: HVVILPLDVDPH*LIDPLLLWWEG
Trigger: CCCCTCCCACCACAGCAGGAGTGGATCAATCAGCCAGTGAGGGTCAACGTCAAGCGGGAGTATGACCACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281428.12
ENST00000344954.10
ENST00000429175.7
ENST00000527767.7
ENST00000527786.7
ENST00000534087.3
ENST00000608055.1
ENST00000608303.5
CDS CCA 72 bp CTGCAGTCCACCGGAGACTCCCTGGATCCATTCATGTaGTCATACTCCCGCTTGACGTTGACCCTCACTGGC +
Preference number: 6 (lower is better)
Translates to: LQSTGDSLDPFM*SYSRLTLTLTG
Trigger: GCCAGTGAGGGTCAACGTCAAGCGGGAGTATGACCACATGAATGGATCCAGGGAGTCTCCGGTGGACTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527767.7
ENST00000527786.7
ENST00000534087.3
ENST00000608055.1
CDS TCA 72 bp GGGGGCCGACTCCAGTCCCTGATTTCAGCACATGGATaGTGTGGGATGACATCACAGCGGTGGGAGCACATT +
Preference number: 6 (lower is better)
Translates to: GGRLQSLISAHG*CGMTSQRWEHI
Trigger: AATGTGCTCCCACCGCTGTGATGTCATCCCACATCATCCATGTGCTGAAATCAGGGACTGGAGTCGGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS TCA 72 bp AGTAGGACCCAGCTCCCCGAGGGGAGCAAGACGTCTTaGCAGATGTGCTTTCTCACTCATTCCTTCGCCCAC +
Preference number: 6 (lower is better)
Translates to: SRTQLPEGSKTS*QMCFLTHSFAH
Trigger: GTGGGCGAAGGAATGAGTGAGAAAGCACATCTGTCAAGACGTCTTGCTCCCCTCGGGGAGCTGGGTCCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS CCA 72 bp TGTAAGACGACGTGTCGGGGACTGTCTGAAACATCGTaGGTAGCTAAGGGTCGGGAACGCCCAAGAACCAGC +
Preference number: 6 (lower is better)
Translates to: CKTTCRGLSETS*VAKGRERPRTS
Trigger: GCTGGTTCTTGGGCGTTCCCGACCCTTAGCTACCCACGATGTTTCAGACAGTCCCCGACACGTCGTCTTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344954.10
ENST00000608303.5
CDS CAA 90 bp GTGGGAGCACATTCCAGGCTCTCTGAGGGCTCTCGGGCTTTTCTATaGATAGTGGAGAGGGCTGGGCTGATGACCACAGAGAAAGGGAAG +
Preference number: 6 (lower is better)
Translates to: VGAHSRLSEGSRAFL*IVERAGLMTTEKGK
Trigger: CTTCCCTTTCTCTGTGGTCATCAGCCCAGCCCTCTCCACTATCAATAGAAAAGCCCGAGAGCCCTCAGAGAGCCTGGAATGTGCTCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS TCA 72 bp AGGCCCATAAGAAGAGTGTCTCAAAGCCCATGGCCATaGCATTCCTGGGGGCCGACTCCAGTCCCTGATTTC +
Preference number: 6 (lower is better)
Translates to: RPIRRVSQSPWP*HSWGPTPVPDF
Trigger: GAAATCAGGGACTGGAGTCGGCCCCCAGGAATGTCATGGCCATGGGCTTTGAGACACTCTTCTTATGGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS CCA 72 bp CCGACTCCAGTCCCTGATTTCAGCACATGGATGATGTaGGATGACATCACAGCGGTGGGAGCACATTCCAGG +
Preference number: 6 (lower is better)
Translates to: PTPVPDFSTWMM*DDITAVGAHSR
Trigger: CCTGGAATGTGCTCCCACCGCTGTGATGTCATCCCACATCATCCATGTGCTGAAATCAGGGACTGGAGTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS CCA 72 bp TATTATAGGCCAGCAGTGAACCTGGATCCATTCATGTaGTCATACTCCCGCTTGACGTTGACCCTCACTGGC +
Preference number: 6 (lower is better)
Translates to: YYRPAVNLDPFM*SYSRLTLTLTG
Trigger: GCCAGTGAGGGTCAACGTCAAGCGGGAGTATGACCACATGAATGGATCCAGGTTCACTGCTGGCCTATAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344954.10
ENST00000608303.5
CDS CAA 72 bp TGGAGACCTGCTCCCCACCTGGGCATGACTAAGGGCTaGCTTCTCAGTTGTCTTGGAGAATACTCCTCAAAT +
Preference number: 6 (lower is better)
Translates to: WRPAPHLGMTKG*LLSCLGEYSSN
Trigger: ATTTGAGGAGTATTCTCCAAGACAACTGAGAAGCAAGCCCTTAGTCATGCCCAGGTGGGGAGCAGGTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS TCA 72 bp ACAAATGGAGCACAAACCTCATCAAACAACAGAGTCTaGCGGGGTGAAACACAACCATGCCCTTCAGCCCCT +
Preference number: 6 (lower is better)
Translates to: TNGAQTSSNNRV*RGETQPCPSAP
Trigger: AGGGGCTGAAGGGCATGGTTGTGTTTCACCCCGTCAGACTCTGTTGTTTGATGAGGTTTGTGCTCCATTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS CAA 72 bp CCCGGCATCTCCTCATCAGGGACAGAAGATAACCTGTaGAGGAGATGGCAGGGTTCTGAGACATCAATTTCT +
Preference number: 6 (lower is better)
Translates to: PGISSSGTEDNL*RRWQGSETSIS
Trigger: AGAAATTGATGTCTCAGAACCCTGCCATCTCCTCAACAGGTTATCTTCTGTCCCTGATGAGGAGATGCCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS CAA 90 bp ATGAGAGGTTGGAGACCTGCTCCCCACCTGGGCATGACTAAGGGCTaGCTTCTCAGTTGTCTTGGAGAATACTCCTCAAATCGAACTTTT +
Preference number: 6 (lower is better)
Translates to: MRGWRPAPHLGMTKG*LLSCLGEYSSNRTF
Trigger: AAAAGTTCGATTTGAGGAGTATTCTCCAAGACAACTGAGAAGCAAGCCCTTAGTCATGCCCAGGTGGGGAGCAGGTCTCCAACCTCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS CCA 72 bp CTAGAATCTACTATGTGCTGGCCCTGTTCTCCAGGCTaGAGATTCAGGAATGAACAAGCAGTTCCTGGTAGA +
Preference number: 6 (lower is better)
Translates to: LESTMCWPCSPG*RFRNEQAVPGR
Trigger: TCTACCAGGAACTGCTTGTTCATTCCTGAATCTCCAGCCTGGAGAACAGGGCCAGCACATAGTAGATTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS CAA 72 bp TTGGGAAGACGGATGGACTCTGATTGCCTGGCCTCATaGTTTCTGGCTAAGAAGATCCAAAAGACAGGGACA +
Preference number: 6 (lower is better)
Translates to: LGRRMDSDCLAS*FLAKKIQKTGT
Trigger: TGTCCCTGTCTTTTGGATCTTCTTAGCCAGAAACAATGAGGCCAGGCAATCAGAGTCCATCCGTCTTCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS CAA 90 bp AAGCCTTCCTTGATACCAACCAGAAGAAAGGAGTTCTGTGTGTGCTaGATTTCTCTCTCCCGCTTATGGGACCAGTGCATGTCTGATTCA +
Preference number: 6 (lower is better)
Translates to: KPSLIPTRRKEFCVC*ISLSRLWDQCMSDS
Trigger: TGAATCAGACATGCACTGGTCCCATAAGCGGGAGAGAGAAATCAAGCACACACAGAACTCCTTTCTTCTGGTTGGTATCAAGGAAGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS CAA 72 bp GAGGAAATCTACCCAGTATCAAGGGGAATGGGGAAATaGGTACGACTTAGCCTCAACAGTTACGGGAGCAAA +
Preference number: 6 (lower is better)
Translates to: EEIYPVSRGMGK*VRLSLNSYGSK
Trigger: TTTGCTCCCGTAACTGTTGAGGCTAAGTCGTACCAATTTCCCCATTCCCCTTGATACTGGGTAGATTTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS TCA 72 bp AGGCATGGCAAGTTTGATTTCTGGTACAGGAGTTCATaGGTCATTCTTGCCCCTTATTCTCTTACTGGGGGA +
Preference number: 6 (lower is better)
Translates to: RHGKFDFWYRSS*VILAPYSLTGG
Trigger: TCCCCCAGTAAGAGAATAAGGGGCAAGAATGACTCATGAACTCCTGTACCAGAAATCAAACTTGCCATGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS TCA 72 bp ATCTGTATTGCTTCTTGCATGGTTTCTGGCTTAGTCTaGCTGGTGTCCTCATTACTCTTCTGTCTCCCCACA +
Preference number: 6 (lower is better)
Translates to: ICIASCMVSGLV*LVSSLLFCLPT
Trigger: TGTGGGGAGACAGAAGAGTAATGAGGACACCAGTCAGACTAAGCCAGAAACCATGCAAGAAGCAATACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS CCA 72 bp AGGAAATCTACCCAGTATCAAGGGGAATGGGGAAATTaGTACGACTTAGCCTCAACAGTTACGGGAGCAAAA +
Preference number: 6 (lower is better)
Translates to: RKSTQYQGEWGN*YDLASTVTGAK
Trigger: TTTTGCTCCCGTAACTGTTGAGGCTAAGTCGTACCAATTTCCCCATTCCCCTTGATACTGGGTAGATTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS CCA 72 bp AATAAGAGTTGGGAAGACGGATGGACTCTGATTGCCTaGCCTCATTGTTTCTGGCTAAGAAGATCCAAAAGA +
Preference number: 6 (lower is better)
Translates to: NKSWEDGWTLIA*PHCFWLRRSKR
Trigger: TCTTTTGGATCTTCTTAGCCAGAAACAATGAGGCCAGGCAATCAGAGTCCATCCGTCTTCCCAACTCTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS CCA 72 bp GATGATATGAGGAAATCTACCCAGTATCAAGGGGAATaGGGAAATTGGTACGACTTAGCCTCAACAGTTACG +
Preference number: 6 (lower is better)
Translates to: DDMRKSTQYQGE*GNWYDLASTVT
Trigger: CGTAACTGTTGAGGCTAAGTCGTACCAATTTCCCCATTCCCCTTGATACTGGGTAGATTTCCTCATATCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS CCA 72 bp GAGTTCATGAGTCATTCTTGCCCCTTATTCTCTTACTaGGGGATATTGGGTAGACTTCGACATGTCATCATC +
Preference number: 6 (lower is better)
Translates to: EFMSHSCPLFSY*GILGRLRHVII
Trigger: GATGATGACATGTCGAAGTCTACCCAATATCCCCCAGTAAGAGAATAAGGGGCAAGAATGACTCATGAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS CCA 72 bp TGCATCACAGATCTGTATTGCTTCTTGCATGGTTTCTaGCTTAGTCTGACTGGTGTCCTCATTACTCTTCTG +
Preference number: 6 (lower is better)
Translates to: CITDLYCFLHGF*LSLTGVLITLL
Trigger: CAGAAGAGTAATGAGGACACCAGTCAGACTAAGCCAGAAACCATGCAAGAAGCAATACAGATCTGTGATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS CAA 90 bp TTCCATTCCCATGATCACTTCTGCATCACAGATCTGTATTGCTTCTaGCATGGTTTCTGGCTTAGTCTGACTGGTGTCCTCATTACTCTT +
Preference number: 6 (lower is better)
Translates to: FHSHDHFCITDLYCF*HGFWLSLTGVLITL
Trigger: AAGAGTAATGAGGACACCAGTCAGACTAAGCCAGAAACCATGCAAGAAGCAATACAGATCTGTGATGCAGAAGTGATCATGGGAATGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS TCA 72 bp GGCCAGAATTCATGTTATTGCCCCAAGCTCCTCTTCTaGCTGAGTCATAAGAAGGGTCTAATGAACAATAAC +
Preference number: 6 (lower is better)
Translates to: GQNSCYCPKLLF*LSHKKGLMNNN
Trigger: GTTATTGTTCATTAGACCCTTCTTATGACTCAGTCAGAAGAGGAGCTTGGGGCAATAACATGAATTCTGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS GCA 72 bp TTTGATGTCTACTCAAAAAGCAGGGAAACAAATGCTTaGTGCTCTCCTGTGTCTCATGATCCTGTTCTCCAA +
Preference number: 6 (lower is better)
Translates to: FDVYSKSRETNA*CSPVSHDPVLQ
Trigger: TTGGAGAACAGGATCATGAGACACAGGAGAGCAGCAAGCATTTGTTTCCCTGCTTTTTGAGTAGACATCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS CCA 72 bp AAAGCATCCCTAAATTCTGGAAGTGTACTCACCCCCTaGGGTTGGAATATTAACACTCTGACTTTCAGAAGA +
Preference number: 6 (lower is better)
Translates to: KASLNSGSVLTP*GWNINTLTFRR
Trigger: TCTTCTGAAAGTCAGAGTGTTAATATTCCAACCCCAGGGGGTGAGTACACTTCCAGAATTTAGGGATGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS CAA 90 bp CACCTGTTCATGTGCTTCATATTTTGCTTCCTAGGCATGGCAAGTTaGATTTCTGGTACAGGAGTTCATGAGTCATTCTTGCCCCTTATT +
Preference number: 6 (lower is better)
Translates to: HLFMCFIFCFLGMAS*ISGTGVHESFLPLI
Trigger: AATAAGGGGCAAGAATGACTCATGAACTCCTGTACCAGAAATCAAACTTGCCATGCCTAGGAAGCAAAATATGAAGCACATGAACAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS TCA 72 bp CCCATTGAGACATTGAGCAGGAATAGCAGAGGAGCTTaGGGATACAGAATTATGACCTTCAAAGTTATTCCA +
Preference number: 6 (lower is better)
Translates to: PIETLSRNSRGA*GYRIMTFKVIP
Trigger: TGGAATAACTTTGAAGGTCATAATTCTGTATCCTCAAGCTCCTCTGCTATTCCTGCTCAATGTCTCAATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS TCA 72 bp GATTTCTCTCTCCCGCTTATGGGACCAGTGCATGTCTaGTTCATCTTTGTGAATCTTATATTGCCAAATGTC +
Preference number: 6 (lower is better)
Translates to: DFSLPLMGPVHV*FIFVNLILPNV
Trigger: GACATTTGGCAATATAAGATTCACAAAGATGAATCAGACATGCACTGGTCCCATAAGCGGGAGAGAGAAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS CCA 72 bp TCAAGTTCTCTTCCTGACACTCTTTGTTGTGAAACCTaGGATGAATCAAAAGTCTCCTCTGGGCTTCAATTT +
Preference number: 6 (lower is better)
Translates to: SSSLPDTLCCET*DESKVSSGLQF
Trigger: AAATTGAAGCCCAGAGGAGACTTTTGATTCATCCCAGGTTTCACAACAAAGAGTGTCAGGAAGAGAACTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS CAA 72 bp GAATTCCCTTTACCACCTGTTCATGTGCTTCATATTTaGCTTCCTAGGCATGGCAAGTTTGATTTCTGGTAC +
Preference number: 6 (lower is better)
Translates to: EFPLPPVHVLHI*LPRHGKFDFWY
Trigger: GTACCAGAAATCAAACTTGCCATGCCTAGGAAGCAAAATATGAAGCACATGAACAGGTGGTAAAGGGAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS CAA 90 bp TTCTTGAAAGAATTCCCTTTACCACCTGTTCATGTGCTTCATATTTaGCTTCCTAGGCATGGCAAGTTTGATTTCTGGTACAGGAGTTCA +
Preference number: 6 (lower is better)
Translates to: FLKEFPLPPVHVLHI*LPRHGKFDFWYRSS
Trigger: TGAACTCCTGTACCAGAAATCAAACTTGCCATGCCTAGGAAGCAAAATATGAAGCACATGAACAGGTGGTAAAGGGAATTCTTTCAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS CCA 72 bp GAACAACAAAGAAACCATAAAAACCATCCGAACAAATaGAGCACAAACCTCATCAAACAACAGAGTCTGACG +
Preference number: 6 (lower is better)
Translates to: EQQRNHKNHPNK*STNLIKQQSLT
Trigger: CGTCAGACTCTGTTGTTTGATGAGGTTTGTGCTCCATTTGTTCGGATGGTTTTTATGGTTTCTTTGTTGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS CAA 72 bp ATGTGCTTCATATTTTGCTTCCTAGGCATGGCAAGTTaGATTTCTGGTACAGGAGTTCATGAGTCATTCTTG +
Preference number: 6 (lower is better)
Translates to: MCFIFCFLGMAS*ISGTGVHESFL
Trigger: CAAGAATGACTCATGAACTCCTGTACCAGAAATCAAACTTGCCATGCCTAGGAAGCAAAATATGAAGCACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS TCA 72 bp GCAGGAATAGCAGAGGAGCTTGAGGATACAGAATTATaGCCTTCAAAGTTATTCCATGAACAACAAAGAAAC +
Preference number: 6 (lower is better)
Translates to: AGIAEELEDTEL*PSKLFHEQQRN
Trigger: GTTTCTTTGTTGTTCATGGAATAACTTTGAAGGTCATAATTCTGTATCCTCAAGCTCCTCTGCTATTCCTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS CCA 72 bp ACTAACAGTATAGCATCACTGATGGTACTGAGGCTGTaGATTTCATTTTCAAATCGGAAAGTTAGAGAAGTC +
Preference number: 6 (lower is better)
Translates to: TNSIASLMVLRL*ISFSNRKVREV
Trigger: GACTTCTCTAACTTTCCGATTTGAAAATGAAATCCACAGCCTCAGTACCATCAGTGATGCTATACTGTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS CAA 72 bp TCCTCAAATCGAACTTTTGTGATCGTAACCCCTTTCTaGAAAGATTCCACATGCTTCCATAAATGTGTTGAG +
Preference number: 6 (lower is better)
Translates to: SSNRTFVIVTPF*KDSTCFHKCVE
Trigger: CTCAACACATTTATGGAAGCATGTGGAATCTTTCAAGAAAGGGGTTACGATCACAAAAGTTCGATTTGAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS CAA 72 bp ATACACGCCAGTGTTCAAAACCTTAGTGACTCTTCATaGCCTAAAGAACTAAGGCATATCTTCATAGCATCA +
Preference number: 6 (lower is better)
Translates to: IHASVQNLSDSS*PKELRHIFIAS
Trigger: TGATGCTATGAAGATATGCCTTAGTTCTTTAGGCAATGAAGAGTCACTAAGGTTTTGAACACTGGCGTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528790.1
CDS CAA 90 bp GGAGAATACTCCTCAAATCGAACTTTTGTGATCGTAACCCCTTTCTaGAAAGATTCCACATGCTTCCATAAATGTGTTGAGAAATTGCTT +
Preference number: 6 (lower is better)
Translates to: GEYSSNRTFVIVTPF*KDSTCFHKCVEKLL
Trigger: AAGCAATTTCTCAACACATTTATGGAAGCATGTGGAATCTTTCAAGAAAGGGGTTACGATCACAAAAGTTCGATTTGAGGAGTATTCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528790.1