Pregenerated sensors for FLG (Homo sapiens)

Ensembl gene IDs: ENSG00000143631

Ensembl transcript IDs: ENST00000368799.2

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	GTCATAGGCTTCATCCTGGATTGTGTAATATGTGGCAATATGGCCTaGTTGTATCCATTTTTGAGTCATTCTTCCTGTATTTTCATAATC	+
Preference number: 5 (lower is better) Translates to: VIGFILDCVICGNMA*LYPFLSHSSCIFII Trigger: GATTATGAAAATACAGGAAGAATGACTCAAAAATGGATACAATCAGGCCATATTGCCACATATTACACAATCCAGGATGAAGCCTATGAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368799.2
CDS CAA 90 bp	ATCCCCTACGCTTTCTTGTCCTGGACTCCTGCAATGGTACCTGGCTaGTATTTTCATGTCTTGACCTGTTCACTTGAGATGATGATTTGC	+
Preference number: 6 (lower is better) Translates to: IPYAFLSWTPAMVPG*YFHVLTCSLEMMIC Trigger: GCAAATCATCATCTCAAGTGAACAGGTCAAGACATGAAAATACAAGCCAGGTACCATTGCAGGAGTCCAGGACAAGAAAGCGTAGGGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368799.2
CDS CAA 72 bp	ACTCCTGCAATGGTACCTGGCTTGTATTTTCATGTCTaGACCTGTTCACTTGAGATGATGATTTGCCATCAG	+
Preference number: 6 (lower is better) Translates to: TPAMVPGLYFHV*TCSLEMMICHQ Trigger: CTGATGGCAAATCATCATCTCAAGTGAACAGGTCAAGACATGAAAATACAAGCCAGGTACCATTGCAGGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368799.2
CDS CAA 72 bp	ATAGACTATCAGTGGTGTCATAGGCTTCATCCTGGATaGTGTAATATGTGGCAATATGGCCTGATTGTATCC	+
Preference number: 6 (lower is better) Translates to: IDYQWCHRLHPG*CNMWQYGLIVS Trigger: GGATACAATCAGGCCATATTGCCACATATTACACAATCCAGGATGAAGCCTATGACACCACTGATAGTCTAT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368799.2
CDS GCA 72 bp	CGGATTCACCATAATCATAATCTGCACTACCATAGCTaGCATGTCTCCAAACTAAACCTGATTGACCTTTTT	+
Preference number: 6 (lower is better) Translates to: RIHHNHNLHYHS*HVSKLNLIDLF Trigger: AAAAAGGTCAATCAGGTTTAGTTTGGAGACATGGCAGCTATGGTAGTGCAGATTATGATTATGGTGAATCCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368799.2
CDS TCA 72 bp	CAATTTTCTTGTTGTGGTCTATATCCAAGTGATCCATaGAGACATCAACCATATCTGGGTCATCTGGATTCT	+
Preference number: 6 (lower is better) Translates to: QFSCCGLYPSDP*RHQPYLGHLDS Trigger: AGAATCCAGATGACCCAGATATGGTTGATGTCTTCATGGATCACTTGGATATAGACCACAACAAGAAAATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368799.2
CDS CAA 90 bp	TTTCTTCTAATAGACTATCAGTGGTGTCATAGGCTTCATCCTGGATaGTGTAATATGTGGCAATATGGCCTGATTGTATCCATTTTTGAG	+
Preference number: 6 (lower is better) Translates to: FLLIDYQWCHRLHPG*CNMWQYGLIVSIFE Trigger: CTCAAAAATGGATACAATCAGGCCATATTGCCACATATTACACAATCCAGGATGAAGCCTATGACACCACTGATAGTCTATTAGAAGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368799.2
CDS TCA 72 bp	TTCATCCTGGATTGTGTAATATGTGGCAATATGGCCTaGTTGTATCCATTTTTGAGTCATTCTTCCTGTATT	+
Preference number: 6 (lower is better) Translates to: FILDCVICGNMA*LYPFLSHSSCI Trigger: AATACAGGAAGAATGACTCAAAAATGGATACAATCAGGCCATATTGCCACATATTACACAATCCAGGATGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368799.2

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu