RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FLCN (Homo sapiens)

Ensembl gene IDs: ENSG00000154803

Ensembl transcript IDs: ENST00000285071.9, ENST00000389168.6, ENST00000389169.9, ENST00000389171.4, ENST00000417064.1, ENST00000461699.1, ENST00000466317.1, ENST00000473853.1, ENST00000480316.1, ENST00000577591.1

Found 478 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGAGTTTGAACACAGAGAGAGCCCATCATCCCTCCGCCTTTCATTaGCATCTTCAGCGATTCCAACGGCTGGAGGGAGAGTCTGGGAAG +
Preference number: 1 (lower is better)
Translates to: RSLNTERAHHPSAFH*HLQRFQRLEGESGK
Trigger: CTTCCCAGACTCTCCCTCCAGCCGTTGGAATCGCTGAAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCTCTCTGTGTTCAAACTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
3UTR CCA 90 bp GACCTGTTTCTCCTGCGGGTTTTGAGTCTAAGTCCACAAGGGGCCTaGGAGGCAAGCTGTCCTCCTAGTCGTCTCTCCAAGGAGTTTGAA +
Preference number: 1 (lower is better)
Translates to: DLFLLRVLSLSPQGA*EASCPPSRLSKEFE
Trigger: TTCAAACTCCTTGGAGAGACGACTAGGAGGACAGCTTGCCTCCCAGGCCCCTTGTGGACTTAGACTCAAAACCCGCAGGAGAAACAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285071.9
3UTR CCA 90 bp AGTTCTCTCTACAGACAGCCCACCTGTGAATTTTCCCCACCTAGCTaGGGAACAGATTCTTTCACATGGCGGTCAAGGCAAACGAGACAG +
Preference number: 1 (lower is better)
Translates to: SSLYRQPTCEFSPPS*GTDSFTWRSRQTRQ
Trigger: CTGTCTCGTTTGCCTTGACCGCCATGTGAAAGAATCTGTTCCCCAGCTAGGTGGGGAAAATTCACAGGTGGGCTGTCTGTAGAGAGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389169.9
3UTR TCA 90 bp TTGAATGTTAACCTCGGGAGCAGACATGTTATTGCGACTGCATACTaGGTCGGACCTGTTTCTCCTGCGGGTTTTGAGTCTAAGTCCACA +
Preference number: 1 (lower is better)
Translates to: LNVNLGSRHVIATAY*VGPVSPAGFESKST
Trigger: TGTGGACTTAGACTCAAAACCCGCAGGAGAAACAGGTCCGACTCAGTATGCAGTCGCAATAACATGTCTGCTCCCGAGGTTAACATTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
3UTR TCA 90 bp GGAGCCCTAACTCAATCACTCAGTGACCAAGAGCTGGCAATGTACTaGATATTCACAACTGCAGCAAAAGGTACCCTCAAACATAAGGCC +
Preference number: 1 (lower is better)
Translates to: GALTQSLSDQELAMY*IFTTAAKGTLKHKA
Trigger: GGCCTTATGTTTGAGGGTACCTTTTGCTGCAGTTGTGAATATTCAGTACATTGCCAGCTCTTGGTCACTGAGTGATTGAGTTAGGGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
3UTR CCA 90 bp ACTTTATTTGTAAAGGAGCAAAGACCGTCGACCAGGCCAAGCACTTaGCTATCACAAAATCGGGACGAGAAGCCTTTAATCAGCCAGTTC +
Preference number: 1 (lower is better)
Translates to: TLFVKEQRPSTRPST*LSQNRDEKPLISQF
Trigger: GAACTGGCTGATTAAAGGCTTCTCGTCCCGATTTTGTGATAGCCAAGTGCTTGGCCTGGTCGACGGTCTTTGCTCCTTTACAAATAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
3UTR CAA 90 bp GGGCCTGGGAGGCAAGCTGTCCTCCTAGTCGTCTCTCCAAGGAGTTaGAACACAGAGAGAGCCCATCATCCCTCCGCCTTTCATTGCCAT +
Preference number: 2 (lower is better)
Translates to: GPGRQAVLLVVSPRS*NTERAHHPSAFHCH
Trigger: ATGGCAATGAAAGGCGGAGGGATGATGGGCTCTCTCTGTGTTCAAACTCCTTGGAGAGACGACTAGGAGGACAGCTTGCCTCCCAGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
3UTR-3UTR TCA 90 bp TCTCCTGCGGGTTTTGAGTCTAAGTCCACAAGGGGCCTGGGAGGCAAGCTGTCCTCTCTCCAAGGAGTTTaGACACAGAGAGAGCCCATC +
Preference number: 2 (lower is better)
Translates to: SPAGFESKSTRGLGGKLSSLQGV*TQREPI
Trigger: GATGGGCTCTCTCTGTGTTCAAACTCCTTGGAGAGA...GGACAGCTTGCCTCCCAGGCCCCTTGTGGACTTAGACTCAAAACCCGCAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285071.9
3UTR-3UTR CCA 90 bp TTGCCGACCCCTCAGCAACCTGTCTTGTGCAAAAATGATCAGGGACTCCATCATTCCCTCTCACGGGGCTaGAGGATCCTGTGGACAGCC +
Preference number: 2 (lower is better)
Translates to: LPTPQQPVLCKNDQGLHHSLSRG*RILWTA
Trigger: GGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGA...ATGATGGAGTCCCTGATCATTTTTGCACAAGACAGGTTGCTGAGGGGTCGGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000285071.9
3UTR CAA 90 bp TTATTGCGACTGCATACTGAGTCGGACCTGTTTCTCCTGCGGGTTTaGAGTCTAAGTCCACAAGGGGCCTGGGAGGCAAGCTGTCCTCCT +
Preference number: 2 (lower is better)
Translates to: LLRLHTESDLFLLRV*SLSPQGAWEASCPP
Trigger: AGGAGGACAGCTTGCCTCCCAGGCCCCTTGTGGACTTAGACTCAAAACCCGCAGGAGAAACAGGTCCGACTCAGTATGCAGTCGCAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
3UTR-3UTR TCA 90 bp AGAGAGCCCATCATCCCTCCGCCTTTCATTGCCATCTTCAGCGATTCCAACGGCGCTCCTTCCAGCAGTTaGGAAACTCAAGGGACAGTC +
Preference number: 2 (lower is better)
Translates to: REPIIPPPFIAIFSDSNGAPSSS*ETQGTV
Trigger: GACTGTCCCTTGAGTTTCTCAACTGCTGGAAGGAGC...GCCGTTGGAATCGCTGAAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
3UTR CAA 90 bp AAGGAGTTTGAACACAGAGAGAGCCCATCATCCCTCCGCCTTTCATaGCCATCTTCAGCGATTCCAACGGCTGGAGGGAGAGTCTGGGAA +
Preference number: 2 (lower is better)
Translates to: KEFEHRESPSSLRLS*PSSAIPTAGGRVWE
Trigger: TTCCCAGACTCTCCCTCCAGCCGTTGGAATCGCTGAAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCTCTCTGTGTTCAAACTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
3UTR-3UTR CCA 90 bp AAATCGGGACGAGAAGCCTTTAATCAGCCAGTTCTCTCTACAGACAGCCCACCTTTTTCCCCACCTAGCTaGGGAACAGATTCTTTCACA +
Preference number: 2 (lower is better)
Translates to: KSGREAFNQPVLSTDSPPFSPPS*GTDSFT
Trigger: TGTGAAAGAATCTGTTCCCCAGCTAGGTGGGGAAAA...AGGTGGGCTGTCTGTAGAGAGAACTGGCTGATTAAAGGCTTCTCGTCCCGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389169.9
3UTR CAA 90 bp CACTTTATTTGTAAAGGAGCAAAGACCGTCGACCAGGCCAAGCACTaGGCTATCACAAAATCGGGACGAGAAGCCTTTAATCAGCCAGTT +
Preference number: 2 (lower is better)
Translates to: HFICKGAKTVDQAKH*AITKSGREAFNQPV
Trigger: AACTGGCTGATTAAAGGCTTCTCGTCCCGATTTTGTGATAGCCAAGTGCTTGGCCTGGTCGACGGTCTTTGCTCCTTTACAAATAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
3UTR CCA 72 bp CTCCTGCGGGTTTTGAGTCTAAGTCCACAAGGGGCCTaGGAGGCAAGCTGTCCTCCTAGTCGTCTCTCCAAG +
Preference number: 3 (lower is better)
Translates to: LLRVLSLSPQGA*EASCPPSRLSK
Trigger: CTTGGAGAGACGACTAGGAGGACAGCTTGCCTCCCAGGCCCCTTGTGGACTTAGACTCAAAACCCGCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285071.9
3UTR CCA 72 bp GTTGAGAAACTCAAGGGACAGTCCCTCTCACGGGGCTaGAGGATCCTGTGGACAGCCATCCCTGTCTTTAGG +
Preference number: 3 (lower is better)
Translates to: VEKLKGQSLSRG*RILWTAIPVFR
Trigger: CCTAAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCCCTTGAGTTTCTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
3UTR-3UTR CAA 90 bp TCTCCTGCGGGTTTTGAGTCTAAGTCCACAAGGGGCCTGGGAGGCAAGCTGTCCGTCTCTCCAAGGAGTTaGAACACAGAGAGAGCCCAT +
Preference number: 3 (lower is better)
Translates to: SPAGFESKSTRGLGGKLSVSPRS*NTERAH
Trigger: ATGGGCTCTCTCTGTGTTCAAACTCCTTGGAGAGAC...GGACAGCTTGCCTCCCAGGCCCCTTGTGGACTTAGACTCAAAACCCGCAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285071.9
3UTR GCA 72 bp AACACAGAGAGAGCCCATCATCCCTCCGCCTTTCATTaGCATCTTCAGCGATTCCAACGGCTGGAGGGAGAG +
Preference number: 3 (lower is better)
Translates to: NTERAHHPSAFH*HLQRFQRLEGE
Trigger: CTCTCCCTCCAGCCGTTGGAATCGCTGAAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCTCTCTGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
3UTR TCA 72 bp AACCTCGGGAGCAGACATGTTATTGCGACTGCATACTaGGTCGGACCTGTTTCTCCTGCGGGTTTTGAGTCT +
Preference number: 3 (lower is better)
Translates to: NLGSRHVIATAY*VGPVSPAGFES
Trigger: AGACTCAAAACCCGCAGGAGAAACAGGTCCGACTCAGTATGCAGTCGCAATAACATGTCTGCTCCCGAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
3UTR CCA 72 bp TACAGACAGCCCACCTGTGAATTTTCCCCACCTAGCTaGGGAACAGATTCTTTCACATGGCGGTCAAGGCAA +
Preference number: 3 (lower is better)
Translates to: YRQPTCEFSPPS*GTDSFTWRSRQ
Trigger: TTGCCTTGACCGCCATGTGAAAGAATCTGTTCCCCAGCTAGGTGGGGAAAATTCACAGGTGGGCTGTCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389169.9
3UTR CCA 72 bp GTAAAGGAGCAAAGACCGTCGACCAGGCCAAGCACTTaGCTATCACAAAATCGGGACGAGAAGCCTTTAATC +
Preference number: 3 (lower is better)
Translates to: VKEQRPSTRPST*LSQNRDEKPLI
Trigger: GATTAAAGGCTTCTCGTCCCGATTTTGTGATAGCCAAGTGCTTGGCCTGGTCGACGGTCTTTGCTCCTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
3UTR TCA 72 bp ACTCAATCACTCAGTGACCAAGAGCTGGCAATGTACTaGATATTCACAACTGCAGCAAAAGGTACCCTCAAA +
Preference number: 3 (lower is better)
Translates to: TQSLSDQELAMY*IFTTAAKGTLK
Trigger: TTTGAGGGTACCTTTTGCTGCAGTTGTGAATATTCAGTACATTGCCAGCTCTTGGTCACTGAGTGATTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
3UTR TCA 72 bp CCAGAAACTCTTGCTGAATTTCAAAGTAGAAACGCTTaGATGTTAACCTCGGGAGCAGACATGTTATTGCGA +
Preference number: 3 (lower is better)
Translates to: PETLAEFQSRNA*MLTSGADMLLR
Trigger: TCGCAATAACATGTCTGCTCCCGAGGTTAACATTCAAGCGTTTCTACTTTGAAATTCAGCAAGAGTTTCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp CCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTAGGCAGGTGGGTAGGTGGTCGCTaGGGGACCCGGACCGGCGGA +
Preference number: 4 (lower is better)
Translates to: PSHGAGGSCGQPSLSLGRWVGGR*GTRTGG
Trigger: TCCGCCGGTCCGGGTCCCGCAGCGACCACCTACCCA...CCTGCCTAAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp CCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTAGGCAGGGGGGCACCCAGGACCTaGCTCATGTGCCGGAGGGAC +
Preference number: 4 (lower is better)
Translates to: PSHGAGGSCGQPSLSLGRGAPRT*LMCRRD
Trigger: GTCCCTCCGGCACATGAGGCAGGTCCTGGGTGCCCC...CCTGCCTAAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR TCA 90 bp GGGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTGGCTGCTGTATGGGATaGTGCGGACGCAGCCCACGG +
Preference number: 4 (lower is better)
Translates to: GTVPLTGLEDPVDSHPCLGCCMG*CGRSPR
Trigger: CCGTGGGCTGCGTCCGCATCATCCCATACAGCAGCC...AAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp CCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTAGGCAGGGGGGCCCACTCGGTCTaGAGCTACAGGGCTCCCACT +
Preference number: 4 (lower is better)
Translates to: PSHGAGGSCGQPSLSLGRGAHSV*SYRAPT
Trigger: AGTGGGAGCCCTGTAGCTGCAGACCGAGTGGGCCCC...CCTGCCTAAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp GGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTACTGCGCTGGGTAGGTaGTCGCTGCGGGACCCGGAC +
Preference number: 4 (lower is better)
Translates to: GQSLSRGWRILWTAIPVFTALGR*SLRDPD
Trigger: GTCCGGGTCCCGCAGCGACCACCTACCCAGCGCAGT...AAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp GGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTTGCTGGACTCGACGCTaGCCCCCTCTGCGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GQSLSRGWRILWTAIPVFCWTRR*PPLRGC
Trigger: ACAGCCCCGCAGAGGGGGCCAGCGTCGAGTCCAGCA...AAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR TCA 90 bp TCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTAGGCAGCCTGGCGGACAATGCTaGAGAGCTGGGGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SLSRGWRILWTAIPVFRQPGGQC*RAGGGW
Trigger: CCAGCCACCCCCAGCTCTTCAGCATTGTCCGCCAGG...CTGCCTAAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR TCA 90 bp GGGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTCCAGCTCCCACAGCCTaGGAGAGAGGAGGACTCTGC +
Preference number: 4 (lower is better)
Translates to: GTVPLTGLEDPVDSHPCLPAPTA*ERGGLC
Trigger: GCAGAGTCCTCCTCTCTCTCAGGCTGTGGGAGCTGG...AAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp GGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTCGTGCAGCACCTCCGTaGAGAAGAGAGTGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: GQSLSRGWRILWTAIPVFRAAPP*RRECGG
Trigger: GCCCCCGCACTCTCTTCTGCACGGAGGTGCTGCACG...AAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp GGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTTCTCGGTCAGCCGGCTaGCACACGCCTTCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: GQSLSRGWRILWTAIPVFSRSAG*HTPSGA
Trigger: GGCTCCTGAAGGCGTGTGGCAGCCGGCTGACCGAGA...AAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp CCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTAGGCAGGGGTGGAACGTGCGGCTaGGTGGACCTCCACGATGAC +
Preference number: 4 (lower is better)
Translates to: PSHGAGGSCGQPSLSLGRGGTCG*VDLHDD
Trigger: GTCATCGTGGAGGTCCACGCAGCCGCACGTTCCACC...CCTGCCTAAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp TCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTAGGCAGGTGGAGGGTGGAACGTaGGGCTGCGTGGACCTCCAC +
Preference number: 4 (lower is better)
Translates to: SLSRGWRILWTAIPVFRQVEGGT*GCVDLH
Trigger: GTGGAGGTCCACGCAGCCGCACGTTCCACCCTCCAC...CTGCCTAAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp GGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTAGAGTGCGGGGGCCGTaGAGCTCGCAGAAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GQSLSRGWRILWTAIPVFRVRGP*SSQKWQ
Trigger: CTGCCACTTCTGCGAGCTCCACGGCCCCCGCACTCT...AAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp GGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTCCACAGGGTGGAGGGTaGAACGTGCGGCTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: GQSLSRGWRILWTAIPVFPQGGG*NVRLRG
Trigger: TCCACGCAGCCGCACGTTCCACCCTCCACCCTGTGG...AAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR TCA 90 bp TCTCCTGCGGGTTTTGAGTCTAAGTCCACAAGGGGCCTGGGAGGCAAGCTGTCCGTGCCCTGCAGCAAGTaGCCGGCAGCCCTCGCACAT +
Preference number: 4 (lower is better)
Translates to: SPAGFESKSTRGLGGKLSVPCSK*PAALAH
Trigger: ATGTGCGAGGGCTGCCGGTCACTTGCTGCAGGGCAC...GGACAGCTTGCCTCCCAGGCCCCTTGTGGACTTAGACTCAAAACCCGCAGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR TCA 90 bp GGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTTGTGCCGGAGGGACTTaGAGACTGGCAGCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: GQSLSRGWRILWTAIPVFCAGGT*RLAASG
Trigger: CCCGGAAGCTGCCAGTCTTCAAGTCCCTCCGGCACA...AAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp AGAGCCCATCATCCCTCCGCCTTTCATTGCCATCTTCAGCGATTCCAACGGCTGGACGCTGGCCCCCTCTaGGGGGCTGTGCGCACGCAT +
Preference number: 4 (lower is better)
Translates to: RAHHPSAFHCHLQRFQRLDAGPL*GAVRTH
Trigger: ATGCGTGCGCACAGCCCCGCAGAGGGGGCCAGCGTC...CAGCCGTTGGAATCGCTGAAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp CCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTAGGCAGGGAGGCTGCTGCCAAATaGGTCAGGCATGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: PSHGAGGSCGQPSLSLGREAAAK*VRHGGG
Trigger: GCCACCACCATGCCTGACCCATTTGGCAGCAGCCTC...CCTGCCTAAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp TTGAGAAACTCAAGGGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGGACTCTGCCGGGCCCTaGGTCAGCTCCCGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LRNSRDSPSHGAGGSCGQDSAGP*VSSRPS
Trigger: AGAAGGGCGGGAGCTGACCCAGGGCCCGGCAGAGTC...CTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCCCTTGAGTTTCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR TCA 90 bp TTGAGAAACTCAAGGGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGTCTGCACGTGCGGGCTaGGCCCCAGGAAGTTGCACC +
Preference number: 4 (lower is better)
Translates to: LRNSRDSPSHGAGGSCGQSARAG*APGSCT
Trigger: GGTGCAACTTCCTGGGGCTCAGCCCGCACGTGCAGA...CTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCCCTTGAGTTTCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp GGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTCTTAGCTGCACGAGCTaGTCCGGCACCTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GQSLSRGWRILWTAIPVFLSCTS*SGTCPP
Trigger: AGGAGGACAGGTGCCGGAGCAGCTCGTGCAGCTAAG...AAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp TCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTAGGCAGAGTTGGCTGCTTAGCTaGACGAGCTGCTCCGGCACC +
Preference number: 4 (lower is better)
Translates to: SLSRGWRILWTAIPVFRQSWLLS*TSCSGT
Trigger: GGTGCCGGAGCAGCTCGTGCAGCTAAGCAGCCAACT...CTGCCTAAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp TTGAGAAACTCAAGGGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGGCGAGCGGGCGGCGTTaGCGTTCCTCTGGTGTAGGA +
Preference number: 4 (lower is better)
Translates to: LRNSRDSPSHGAGGSCGQASGRR*RSSGVG
Trigger: TCCTACACCAGAGGAACGGCAACGCCGCCCGCTCGC...CTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCCCTTGAGTTTCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp CCTGGGAGGCAAGCTGTCCTCCTAGTCGTCTCTCCAAGGAGTTTGAACACAGAGGGATGTCACCCGGGGTaGCGAGGCTCTCAAGCCCGG +
Preference number: 4 (lower is better)
Translates to: PGRQAVLLVVSPRSLNTEGCHPG*RGSQAR
Trigger: CCGGGCTTGAGAGCCTCGCCACCCCGGGTGACATCC...CTCTGTGTTCAAACTCCTTGGAGAGACGACTAGGAGGACAGCTTGCCTCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp GACCGTCGACCAGGCCAAGCACTTGGCTATCACAAAATCGGGACGAGAAGCCTTGGATGTCACCCGGGGTaGCGAGGCTCTCAAGCCCGG +
Preference number: 4 (lower is better)
Translates to: DRRPGQALGYHKIGTRSLGCHPG*RGSQAR
Trigger: CCGGGCTTGAGAGCCTCGCCACCCCGGGTGACATCC...AAGGCTTCTCGTCCCGATTTTGTGATAGCCAAGTGCTTGGCCTGGTCGACGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR CCA 90 bp GGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTATCCCCTTGAGGAAGTaGGGCGTGCAGCACCTCCGT +
Preference number: 4 (lower is better)
Translates to: GQSLSRGWRILWTAIPVFIPLRK*GVQHLR
Trigger: ACGGAGGTGCTGCACGCCCCACTTCCTCAAGGGGAT...AAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp TCTCCTGCGGGTTTTGAGTCTAAGTCCACAAGGGGCCTGGGAGGCAAGCTGTCCTCCCTCTCACGGGGCTaGAGGATCCTGTGGACAGCC +
Preference number: 4 (lower is better)
Translates to: SPAGFESKSTRGLGGKLSSLSRG*RILWTA
Trigger: GGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGA...GGACAGCTTGCCTCCCAGGCCCCTTGTGGACTTAGACTCAAAACCCGCAGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR TCA 90 bp GGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTGCTGTGTTCATCCTCTaGGCACGCTGTGGGCATCCA +
Preference number: 4 (lower is better)
Translates to: GQSLSRGWRILWTAIPVFAVFIL*ARCGHP
Trigger: TGGATGCCCACAGCGTGCTCAGAGGATGAACACAGC...AAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR TCA 90 bp GGGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTGCGGACCGTGGACATaGGGTGTGACTTGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: GTVPLTGLEDPVDSHPCLCGPWT*GVTCRS
Trigger: AGACCTACAAGTCACACCTCATGTCCACGGTCCGCA...AAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp GGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTAGACCTGGCGTTTTCTaGTCCCCAAATCGAGGCCCG +
Preference number: 4 (lower is better)
Translates to: GQSLSRGWRILWTAIPVFRPGVF*SPNRGP
Trigger: CGGGCCTCGATTTGGGGAGCAGAAAACGCCAGGTCT...AAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp CCTGGGAGGCAAGCTGTCCTCCTAGTCGTCTCTCCAAGGAGTTTGAACACAGAGCCCTCTGCGGGGCTGTaGGCACGCATCCGACTGTTC +
Preference number: 4 (lower is better)
Translates to: PGRQAVLLVVSPRSLNTEPSAGL*ARIRLF
Trigger: GAACAGTCGGATGCGTGCGCACAGCCCCGCAGAGGG...CTCTGTGTTCAAACTCCTTGGAGAGACGACTAGGAGGACAGCTTGCCTCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp TCTCCTGCGGGTTTTGAGTCTAAGTCCACAAGGGGCCTGGGAGGCAAGCTGTCCCAGGCAAAGGAGGTGTaGAGGCACGCCCACAGGTTG +
Preference number: 4 (lower is better)
Translates to: SPAGFESKSTRGLGGKLSQAKEV*RHAHRL
Trigger: CAACCTGTGGGCGTGCCTGCACACCTCCTTTGCCTG...GGACAGCTTGCCTCCCAGGCCCCTTGTGGACTTAGACTCAAAACCCGCAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp TCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTAGGCAGGGCAAGTCAGATGCTTaGCGACCCCTCAGCAACCTG +
Preference number: 4 (lower is better)
Translates to: SLSRGWRILWTAIPVFRQGKSDA*RPLSNL
Trigger: CAGGTTGCTGAGGGGTCGGCAAGCATCTGACTTGCC...CTGCCTAAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp GGGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTATGGGTCAGGCATGGTaGTGGCAGACACCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: GTVPLTGLEDPVDSHPCLMGQAW*WQTPLK
Trigger: CTTCAAGGGTGTCTGCCACCACCATGCCTGACCCAT...AAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp TTGCCGACCCCTCAGCAACCTGTCTTGTGCAAAAATGATCAGGGACTCCATCATTGGGCCCCGGGCTGCTaGACTCGACGCTGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: LPTPQQPVLCKNDQGLHHWAPGC*TRRWPP
Trigger: AGGGGGCCAGCGTCGAGTCCAGCAGCCCGGGGCCCA...ATGATGGAGTCCCTGATCATTTTTGCACAAGACAGGTTGCTGAGGGGTCGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp TCTCCTGCGGGTTTTGAGTCTAAGTCCACAAGGGGCCTGGGAGGCAAGCTGTCCGAACGTGCGGCTGCGTaGACCTCCACGATGACAGCA +
Preference number: 4 (lower is better)
Translates to: SPAGFESKSTRGLGGKLSERAAA*TSTMTA
Trigger: TGCTGTCATCGTGGAGGTCCACGCAGCCGCACGTTC...GGACAGCTTGCCTCCCAGGCCCCTTGTGGACTTAGACTCAAAACCCGCAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp GGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTAGGCAGACGAGGCACTaGTCCACCACATCCACAGAC +
Preference number: 4 (lower is better)
Translates to: GQSLSRGWRILWTAIPVFRQTRH*STTSTD
Trigger: GTCTGTGGATGTGGTGGACCAGTGCCTCGTCTGCCT...AAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp AGAGCCCATCATCCCTCCGCCTTTCATTGCCATCTTCAGCGATTCCAACGGCTGGAGACTCCGAGGCTGTaGGGCTGCGGACCGTGGACA +
Preference number: 4 (lower is better)
Translates to: RAHHPSAFHCHLQRFQRLETPRL*GCGPWT
Trigger: TGTCCACGGTCCGCAGCCCCACAGCCTCGGAGTCTC...CAGCCGTTGGAATCGCTGAAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR TCA 90 bp TTGAGAAACTCAAGGGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCTGGAGCTCATCGATaGTTCCCCGGACCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: LRNSRDSPSHGAGGSCGQPGAHR*FPGPSP
Trigger: TGGGGAAGGTCCGGGGAATCATCGATGAGCTCCAGG...CTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCCCTTGAGTTTCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp TCTCCTGCGGGTTTTGAGTCTAAGTCCACAAGGGGCCTGGGAGGCAAGCTGTCCCACCACACACGAGGCTaGTGCCAAATGGGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: SPAGFESKSTRGLGGKLSHHTRG*CQMGQA
Trigger: TGCCTGACCCATTTGGCAGCAGCCTCGTGTGTGGTG...GGACAGCTTGCCTCCCAGGCCCCTTGTGGACTTAGACTCAAAACCCGCAGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp CAAAATCGGGACGAGAAGCCTTTAATCAGCCAGTTCTCTCTACAGACAGCCCACGACGCTGGCCCCCTCTaGGGGGCTGTGCGCACGCAT +
Preference number: 4 (lower is better)
Translates to: QNRDEKPLISQFSLQTAHDAGPL*GAVRTH
Trigger: ATGCGTGCGCACAGCCCCGCAGAGGGGGCCAGCGTC...GTGGGCTGTCTGTAGAGAGAACTGGCTGATTAAAGGCTTCTCGTCCCGATTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR GCA 90 bp GGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTTTCCCCATGAGAACGTaGCAGGCCAGCATGCGGAAA +
Preference number: 4 (lower is better)
Translates to: GQSLSRGWRILWTAIPVFFPMRT*QASMRK
Trigger: TTTCCGCATGCTGGCCTGGCACGTTCTCATGGGGAA...AAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp CCTGGGAGGCAAGCTGTCCTCCTAGTCGTCTCTCCAAGGAGTTTGAACACAGAGGGCTCTCAGGGGAGCTaGCAGAACCAGGAGCGACCA +
Preference number: 4 (lower is better)
Translates to: PGRQAVLLVVSPRSLNTEGSQGS*QNQERP
Trigger: TGGTCGCTCCTGGTTCTGCCAGCTCCCCTGAGAGCC...CTCTGTGTTCAAACTCCTTGGAGAGACGACTAGGAGGACAGCTTGCCTCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp GGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTCAAATGGGTCAGGCATaGTGGTGGCAGACACCCTTG +
Preference number: 4 (lower is better)
Translates to: GQSLSRGWRILWTAIPVFQMGQA*WWQTPL
Trigger: CAAGGGTGTCTGCCACCACCATGCCTGACCCATTTG...AAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp CCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTAGGCAGGCCACGATGGCATTCATaGTGCCTTGGAGACTGCAAC +
Preference number: 4 (lower is better)
Translates to: PSHGAGGSCGQPSLSLGRPRWHS*CLGDCN
Trigger: GTTGCAGTCTCCAAGGCACCATGAATGCCATCGTGG...CCTGCCTAAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp TCTCCTGCGGGTTTTGAGTCTAAGTCCACAAGGGGCCTGGGAGGCAAGCTGTCCACATGTCCGACTTTTTaGGCCCCGGGCTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: SPAGFESKSTRGLGGKLSTCPTF*APGCWT
Trigger: AGTCCAGCAGCCCGGGGCCCAAAAAGTCGGACATGT...GGACAGCTTGCCTCCCAGGCCCCTTGTGGACTTAGACTCAAAACCCGCAGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp GGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTGCGTTGCCGTTCCTCTaGTGTAGGAATGGCGTGAAG +
Preference number: 4 (lower is better)
Translates to: GQSLSRGWRILWTAIPVFALPFL*CRNGVK
Trigger: CTTCACGCCATTCCTACACCAGAGGAACGGCAACGC...AAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp AGAGAGCCCATCATCCCTCCGCCTTTCATTGCCATCTTCAGCGATTCCAACGGCTCACACCCCACAGGGTaGAGGGTGGAACGTGCGGCT +
Preference number: 4 (lower is better)
Translates to: REPIIPPPFIAIFSDSNGSHPTG*RVERAA
Trigger: AGCCGCACGTTCCACCCTCCACCCTGTGGGGTGTGA...GCCGTTGGAATCGCTGAAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp GGGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTCAATCTTATTCAGGATaGTGGGGCCCACTCGGTCTG +
Preference number: 4 (lower is better)
Translates to: GTVPLTGLEDPVDSHPCLQSYSG*WGPLGL
Trigger: CAGACCGAGTGGGCCCCACCATCCTGAATAAGATTG...AAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR TCA 90 bp TTGAGAAACTCAAGGGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCTGCTGAGATACGGCTaGGCACGAGTGGTCACACTG +
Preference number: 4 (lower is better)
Translates to: LRNSRDSPSHGAGGSCGQLLRYG*ARVVTL
Trigger: CAGTGTGACCACTCGTGCTCAGCCGTATCTCAGCAG...CTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCCCTTGAGTTTCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR TCA 90 bp AGAGAGCCCATCATCCCTCCGCCTTTCATTGCCATCTTCAGCGATTCCAACGGCCACCTGTCCTCCTGCTaGGATACGGCTGAGCACGAG +
Preference number: 4 (lower is better)
Translates to: REPIIPPPFIAIFSDSNGHLSSC*DTAEHE
Trigger: CTCGTGCTCAGCCGTATCTCAGCAGGAGGACAGGTG...GCCGTTGGAATCGCTGAAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR TCA 90 bp CCTGGGAGGCAAGCTGTCCTCCTAGTCGTCTCTCCAAGGAGTTTGAACACAGAGTCATTCCCATCCCCTTaGGGAAGTGGGGCGTGCAGC +
Preference number: 4 (lower is better)
Translates to: PGRQAVLLVVSPRSLNTESFPSP*GSGACS
Trigger: GCTGCACGCCCCACTTCCTCAAGGGGATGGGAATGA...CTCTGTGTTCAAACTCCTTGGAGAGACGACTAGGAGGACAGCTTGCCTCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR TCA 90 bp GTAAAGGAGCAAAGACCGTCGACCAGGCCAAGCACTTGGCTATCACAAAATCGGGTGCCCTGCAGCAAGTaGCCGGCAGCCCTCGCACAT +
Preference number: 4 (lower is better)
Translates to: VKEQRPSTRPSTWLSQNRVPCSK*PAALAH
Trigger: ATGTGCGAGGGCTGCCGGTCACTTGCTGCAGGGCAC...CCGATTTTGTGATAGCCAAGTGCTTGGCCTGGTCGACGGTCTTTGCTCCTTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR TCA 90 bp CCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTAGGCAGGTCTCTTTATCATGGCTaGTATATCCCGGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: PSHGAGGSCGQPSLSLGRSLYHG*YIPGAL
Trigger: CAGGGCACCCGGGATATATCAGCCATGATAAAGAGA...CCTGCCTAAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR TCA 90 bp AGAGCCCATCATCCCTCCGCCTTTCATTGCCATCTTCAGCGATTCCAACGGCTGCTGCCTCAAACACCTTaGGCGCCTTGCCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: RAHHPSAFHCHLQRFQRLLPQTP*APCPGA
Trigger: AGCTCCAGGGCAAGGCGCTCAAGGTGTTTGAGGCAG...CAGCCGTTGGAATCGCTGAAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR TCA 90 bp TCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTAGGCAGGGTGTAGGAATGGCGTaGAGGCTGTGTTCATCCTCT +
Preference number: 4 (lower is better)
Translates to: SLSRGWRILWTAIPVFRQGVGMA*RLCSSS
Trigger: AGAGGATGAACACAGCCTTCACGCCATTCCTACACC...CTGCCTAAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR TCA 90 bp AGAGAGCCCATCATCCCTCCGCCTTTCATTGCCATCTTCAGCGATTCCAACGGCTCACCTGGTTCCCCATaGGAACGTGCCAGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: REPIIPPPFIAIFSDSNGSPGSP*ERARPA
Trigger: TGCTGGCCTGGCACGTTCTCATGGGGAACCAGGTGA...GCCGTTGGAATCGCTGAAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR TCA 90 bp TCTCCTGCGGGTTTTGAGTCTAAGTCCACAAGGGGCCTGGGAGGCAAGCTGTCCCGTGGACCTCCACGATaGCAGCAAACTCTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: SPAGFESKSTRGLGGKLSRGPPR*QQTLRR
Trigger: TCTCCTCAGAGTTTGCTGTCATCGTGGAGGTCCACG...GGACAGCTTGCCTCCCAGGCCCCTTGTGGACTTAGACTCAAAACCCGCAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR TCA 90 bp TCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTAGGCAGCGTGGACATGAGGTGTaGCTTGTAGGTCTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: SLSRGWRILWTAIPVFRQRGHEV*LVGLAQ
Trigger: CTGAGCAAGACCTACAAGTCACACCTCATGTCCACG...CTGCCTAAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR TCA 90 bp GGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTGCTCCTTCCAGCAGTTaGGAAACTCAAGGGACAGTC +
Preference number: 4 (lower is better)
Translates to: GQSLSRGWRILWTAIPVFAPSSS*ETQGTV
Trigger: GACTGTCCCTTGAGTTTCTCAACTGCTGGAAGGAGC...AAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR TCA 90 bp GACCGTCGACCAGGCCAAGCACTTGGCTATCACAAAATCGGGACGAGAAGCCTTAGGCTCGTTCTGGGCTaGTTCAGAGCCGCGTTTCCC +
Preference number: 4 (lower is better)
Translates to: DRRPGQALGYHKIGTRSLRLVLG*FRAAFP
Trigger: GGGAAACGCGGCTCTGAATCAGCCCAGAACGAGCCT...AAGGCTTCTCGTCCCGATTTTGTGATAGCCAAGTGCTTGGCCTGGTCGACGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR GCA 90 bp TCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTAGGCAGTGGTGCCTTGGAGACTaGAACAGGCCTGACGTTTCT +
Preference number: 4 (lower is better)
Translates to: SLSRGWRILWTAIPVFRQWCLGD*NRPDVS
Trigger: AGAAACGTCAGGCCTGTTGCAGTCTCCAAGGCACCA...CTGCCTAAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp AGGAGTTTGAACACAGAGAGAGCCCATCATCCCTCCGCCTTTCATTGCCATCTTTTTTGGGCCCCGGGCTaGTGGACTCGACGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: RSLNTERAHHPSAFHCHLFWAPG*WTRRWP
Trigger: GGGCCAGCGTCGAGTCCAGCAGCCCGGGGCCCAAAA...AAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCTCTCTGTGTTCAAACTCCT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp AAATCGGGACGAGAAGCCTTTAATCAGCCAGTTCTCTCTACAGACAGCCCACCTTTTTGGGCCCCGGGCTaGTGGACTCGACGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: KSGREAFNQPVLSTDSPPFWAPG*WTRRWP
Trigger: GGGCCAGCGTCGAGTCCAGCAGCCCGGGGCCCAAAA...AGGTGGGCTGTCTGTAGAGAGAACTGGCTGATTAAAGGCTTCTCGTCCCGATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR GCA 90 bp CCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTAGGCAGGTGTGGGCATCCAAACTaGTCTGCCTCAAACACCTTG +
Preference number: 4 (lower is better)
Translates to: PSHGAGGSCGQPSLSLGRCGHPN*SASNTL
Trigger: CAAGGTGTTTGAGGCAGAGCAGTTTGGATGCCCACA...CCTGCCTAAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp TCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTAGGCAGCGAGGTCCACGTCTCTaGTTTTCCAGATCACCTGGT +
Preference number: 4 (lower is better)
Translates to: SLSRGWRILWTAIPVFRQRGPRL*FSRSPG
Trigger: ACCAGGTGATCTGGAAAAGCAGAGACGTGGACCTCG...CTGCCTAAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp CACCTAGCTGGGGAACAGATTCTTTCACATGGCGGTCAAGGCAAACGAGACAGGCGGCAACAGCACCCCTaGCTCACCAGCGAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: HLAGEQILSHGGQGKRDRRQQHP*LTSELL
Trigger: GAGAAGCTCGCTGGTGAGGCAGGGGTGCTGTTGCCG...CCTGTCTCGTTTGCCTTGACCGCCATGTGAAAGAATCTGTTCCCCAGCTAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR CCA 90 bp AAATCGGGACGAGAAGCCTTTAATCAGCCAGTTCTCTCTACAGACAGCCCACCTACTGCGCTGGGTAGGTaGTCGCTGCGGGACCCGGAC +
Preference number: 4 (lower is better)
Translates to: KSGREAFNQPVLSTDSPPTALGR*SLRDPD
Trigger: GTCCGGGTCCCGCAGCGACCACCTACCCAGCGCAGT...AGGTGGGCTGTCTGTAGAGAGAACTGGCTGATTAAAGGCTTCTCGTCCCGATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR CCA 90 bp CCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTAGGCAGGACACCCTTGAAGACCTaGCGTTTTCTGCTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: PSHGAGGSCGQPSLSLGRTPLKT*RFLLPK
Trigger: TTTGGGGAGCAGAAAACGCCAGGTCTTCAAGGGTGT...CCTGCCTAAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp TCTCCTGCGGGTTTTGAGTCTAAGTCCACAAGGGGCCTGGGAGGCAAGCTGTCCGGCAGAGAGCCACGATaGCATTCATGGTGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: SPAGFESKSTRGLGGKLSGREPR*HSWCLG
Trigger: TCCAAGGCACCATGAATGCCATCGTGGCTCTCTGCC...GGACAGCTTGCCTCCCAGGCCCCTTGTGGACTTAGACTCAAAACCCGCAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp GTAAAGGAGCAAAGACCGTCGACCAGGCCAAGCACTTGGCTATCACAAAATCGGAGAGTGCGGGGGCCGTaGAGCTCGCAGAAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: VKEQRPSTRPSTWLSQNRRVRGP*SSQKWQ
Trigger: CTGCCACTTCTGCGAGCTCCACGGCCCCCGCACTCT...CCGATTTTGTGATAGCCAAGTGCTTGGCCTGGTCGACGGTCTTTGCTCCTTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR CCA 90 bp CAGCCAGTTCTCTCTACAGACAGCCCACCTGTGAATTTTCCCCACCTAGCTGGGATCCCCTTGAGGAAGTaGGGCGTGCAGCACCTCCGT +
Preference number: 4 (lower is better)
Translates to: QPVLSTDSPPVNFPHLAGIPLRK*GVQHLR
Trigger: ACGGAGGTGCTGCACGCCCCACTTCCTCAAGGGGAT...CCCAGCTAGGTGGGGAAAATTCACAGGTGGGCTGTCTGTAGAGAGAACTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR CCA 90 bp CCTGGGAGGCAAGCTGTCCTCCTAGTCGTCTCTCCAAGGAGTTTGAACACAGAGTCCGCCTGCTCACCCTaGCCAGGACTGTCCTCATTC +
Preference number: 4 (lower is better)
Translates to: PGRQAVLLVVSPRSLNTESACSP*PGLSSF
Trigger: GAATGAGGACAGTCCTGGCCAGGGTGAGCAGGCGGA...CTCTGTGTTCAAACTCCTTGGAGAGACGACTAGGAGGACAGCTTGCCTCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp AGGCCAAGCACTTGGCTATCACAAAATCGGGACGAGAAGCCTTTAATCAGCCAGTGCTGGACTCGACGCTaGCCCCCTCTGCGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: RPSTWLSQNRDEKPLISQCWTRR*PPLRGC
Trigger: ACAGCCCCGCAGAGGGGGCCAGCGTCGAGTCCAGCA...CTGGCTGATTAAAGGCTTCTCGTCCCGATTTTGTGATAGCCAAGTGCTTGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR CCA 90 bp AGAGAGCCCATCATCCCTCCGCCTTTCATTGCCATCTTCAGCGATTCCAACGGCCTCCGGACACAGGCCTaGCGGACAATGCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: REPIIPPPFIAIFSDSNGLRTQA*RTMLKS
Trigger: GCTCTTCAGCATTGTCCGCCAGGCCTGTGTCCGGAG...GCCGTTGGAATCGCTGAAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp TCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTAGGCAGCCCTTCTGTACTCTCTaGCAACACAGGGGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: SLSRGWRILWTAIPVFRQPFCTL*QHRGFL
Trigger: GAGAAAGCCCCTGTGTTGCCAGAGAGTACAGAAGGG...CTGCCTAAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp GGGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTACTTCAAAAGCTGACTaGACGAGGTCCACGTCTCTG +
Preference number: 4 (lower is better)
Translates to: GTVPLTGLEDPVDSHPCLTSKAD*TRSTSL
Trigger: CAGAGACGTGGACCTCGTCCAGTCAGCTTTTGAAGT...AAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp TCTCCTGCGGGTTTTGAGTCTAAGTCCACAAGGGGCCTGGGAGGCAAGCTGTCCTCTTATTCAGGATGGTaGGGCCCACTCGGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SPAGFESKSTRGLGGKLSSYSGW*GPLGLQ
Trigger: CTGCAGACCGAGTGGGCCCCACCATCCTGAATAAGA...GGACAGCTTGCCTCCCAGGCCCCTTGTGGACTTAGACTCAAAACCCGCAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR TCA 90 bp TCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTAGGCAGCAAACTCGTACTTGCTaGGAGACTGGTCATCCTCAC +
Preference number: 4 (lower is better)
Translates to: SLSRGWRILWTAIPVFRQQTRTC*ETGHPH
Trigger: GTGAGGATGACCAGTCTCTCAGCAAGTACGAGTTTG...CTGCCTAAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR TCA 90 bp TCTCCTGCGGGTTTTGAGTCTAAGTCCACAAGGGGCCTGGGAGGCAAGCTGTCCAGAACTTCAGCAGCTTaGCATTGTCCTCCTCGGACG +
Preference number: 4 (lower is better)
Translates to: SPAGFESKSTRGLGGKLSRTSAA*HCPPRT
Trigger: CGTCCGAGGAGGACAATGTCAAGCTGCTGAAGTTCT...GGACAGCTTGCCTCCCAGGCCCCTTGTGGACTTAGACTCAAAACCCGCAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR TCA 90 bp TTGAGAAACTCAAGGGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGTTAGGCAGGTGTGTGTaGCGGGTCAGTTCCGAGACT +
Preference number: 4 (lower is better)
Translates to: LRNSRDSPSHGAGGSCGQLGRCV*RVSSET
Trigger: AGTCTCGGAACTGACCCGTCACACACACCTGCCTAA...CTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCCCTTGAGTTTCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp AGAGAGCCCATCATCCCTCCGCCTTTCATTGCCATCTTCAGCGATTCCAACGGCCACACACGAGGCTGCTaGCAAATGGGTCAGGCATGG +
Preference number: 4 (lower is better)
Translates to: REPIIPPPFIAIFSDSNGHTRGC*QMGQAW
Trigger: CCATGCCTGACCCATTTGGCAGCAGCCTCGTGTGTG...GCCGTTGGAATCGCTGAAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp TCTCCTGCGGGTTTTGAGTCTAAGTCCACAAGGGGCCTGGGAGGCAAGCTGTCCGTTTCTGCAGTTGGCTaGTTAGCTGCACGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SPAGFESKSTRGLGGKLSVSAVG*LAARAA
Trigger: AGCAGCTCGTGCAGCTAAGCAGCCAACTGCAGAAAC...GGACAGCTTGCCTCCCAGGCCCCTTGTGGACTTAGACTCAAAACCCGCAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp CCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTAGGCAGGGACTGTTCATCTGAATaGCACCTTCCTCTTCTTCCG +
Preference number: 4 (lower is better)
Translates to: PSHGAGGSCGQPSLSLGRDCSSE*HLPLLP
Trigger: CGGAAGAAGAGGAAGGTGGCATTCAGATGAACAGTC...CCTGCCTAAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp GGACGAGAAGCCTTTAATCAGCCAGTTCTCTCTACAGACAGCCCACCTGTGAATCCCTCTGCGGGGCTGTaGGCACGCATCCGACTGTTC +
Preference number: 4 (lower is better)
Translates to: GREAFNQPVLSTDSPPVNPSAGL*ARIRLF
Trigger: GAACAGTCGGATGCGTGCGCACAGCCCCGCAGAGGG...ATTCACAGGTGGGCTGTCTGTAGAGAGAACTGGCTGATTAAAGGCTTCTCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR GCA 90 bp CCTGGGAGGCAAGCTGTCCTCCTAGTCGTCTCTCCAAGGAGTTTGAACACAGAGCTGATATATCCCGGGTaGCCTGCAGCAAGTGACCGG +
Preference number: 4 (lower is better)
Translates to: PGRQAVLLVVSPRSLNTELIYPG*PAASDR
Trigger: CCGGTCACTTGCTGCAGGGCACCCGGGATATATCAG...CTCTGTGTTCAAACTCCTTGGAGAGACGACTAGGAGGACAGCTTGCCTCCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp CCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTAGGCAGGAACACAAAGCCGTGCTaGTCATCTCCGAAGAAGATG +
Preference number: 4 (lower is better)
Translates to: PSHGAGGSCGQPSLSLGRNTKPC*SSPKKM
Trigger: CATCTTCTTCGGAGATGAGCAGCACGGCTTTGTGTT...CCTGCCTAAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp AAATCGGGACGAGAAGCCTTTAATCAGCCAGTTCTCTCTACAGACAGCCCACCTGCGAGCGGGCGGCGTTaGCGTTCCTCTGGTGTAGGA +
Preference number: 4 (lower is better)
Translates to: KSGREAFNQPVLSTDSPPASGRR*RSSGVG
Trigger: TCCTACACCAGAGGAACGGCAACGCCGCCCGCTCGC...AGGTGGGCTGTCTGTAGAGAGAACTGGCTGATTAAAGGCTTCTCGTCCCGATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR GCA 90 bp TCGACCAGGCCAAGCACTTGGCTATCACAAAATCGGGACGAGAAGCCTTTAATCTCTCGGTCAGCCGGCTaGCACACGCCTTCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: STRPSTWLSQNRDEKPLISRSAG*HTPSGA
Trigger: GGCTCCTGAAGGCGTGTGGCAGCCGGCTGACCGAGA...GATTAAAGGCTTCTCGTCCCGATTTTGTGATAGCCAAGTGCTTGGCCTGGTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR CCA 90 bp CCTGGGAGGCAAGCTGTCCTCCTAGTCGTCTCTCCAAGGAGTTTGAACACAGAGGGTCAGGCATGGTGGTaGCAGACACCCTTGAAGACC +
Preference number: 4 (lower is better)
Translates to: PGRQAVLLVVSPRSLNTEGQAWW*QTPLKT
Trigger: GGTCTTCAAGGGTGTCTGCCACCACCATGCCTGACC...CTCTGTGTTCAAACTCCTTGGAGAGACGACTAGGAGGACAGCTTGCCTCCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp CCTGGGAGGCAAGCTGTCCTCCTAGTCGTCTCTCCAAGGAGTTTGAACACAGAGTGGAGCTCGCAGAAGTaGCAGAGAGCCACGATGGCA +
Preference number: 4 (lower is better)
Translates to: PGRQAVLLVVSPRSLNTEWSSQK*QRATMA
Trigger: TGCCATCGTGGCTCTCTGCCACTTCTGCGAGCTCCA...CTCTGTGTTCAAACTCCTTGGAGAGACGACTAGGAGGACAGCTTGCCTCCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp GACCGTCGACCAGGCCAAGCACTTGGCTATCACAAAATCGGGACGAGAAGCCTTACATGTCCGACTTTTTaGGCCCCGGGCTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: DRRPGQALGYHKIGTRSLTCPTF*APGCWT
Trigger: AGTCCAGCAGCCCGGGGCCCAAAAAGTCGGACATGT...AAGGCTTCTCGTCCCGATTTTGTGATAGCCAAGTGCTTGGCCTGGTCGACGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR CCA 90 bp TCTCCTGCGGGTTTTGAGTCTAAGTCCACAAGGGGCCTGGGAGGCAAGCTGTCCTGGCTGGGGTGCTGGTaGCTGACGTATTTAATGGAG +
Preference number: 4 (lower is better)
Translates to: SPAGFESKSTRGLGGKLSWLGCW*LTYLME
Trigger: CTCCATTAAATACGTCAGCCACCAGCACCCCAGCCA...GGACAGCTTGCCTCCCAGGCCCCTTGTGGACTTAGACTCAAAACCCGCAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp TTGAGAAACTCAAGGGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGTTGAGCGCCTTGCCCTaGAGCTCATCGATGATTCCC +
Preference number: 4 (lower is better)
Translates to: LRNSRDSPSHGAGGSCGQLSALP*SSSMIP
Trigger: GGGAATCATCGATGAGCTCCAGGGCAAGGCGCTCAA...CTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCCCTTGAGTTTCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp GGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTCTTTTCCAGATCACCTaGTTCCCCATGAGAACGTGC +
Preference number: 4 (lower is better)
Translates to: GQSLSRGWRILWTAIPVFLFQIT*FPMRTC
Trigger: GCACGTTCTCATGGGGAACCAGGTGATCTGGAAAAG...AAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp AGAGCCCATCATCCCTCCGCCTTTCATTGCCATCTTCAGCGATTCCAACGGCTGGTACTGGCTGCTGTATaGGATGATGCGGACGCAGCC +
Preference number: 4 (lower is better)
Translates to: RAHHPSAFHCHLQRFQRLVLAAV*DDADAA
Trigger: GGCTGCGTCCGCATCATCCCATACAGCAGCCAGTAC...CAGCCGTTGGAATCGCTGAAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp GGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTTACTTGCTGAGAGACTaGTCATCCTCACACCCCACA +
Preference number: 4 (lower is better)
Translates to: GQSLSRGWRILWTAIPVFYLLRD*SSSHPT
Trigger: TGTGGGGTGTGAGGATGACCAGTCTCTCAGCAAGTA...AAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp GGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTCAGACAGGTTCTGGTTaGTCAGAGCCGCTTCAATCT +
Preference number: 4 (lower is better)
Translates to: GQSLSRGWRILWTAIPVFQTGSG*SEPLQS
Trigger: AGATTGAAGCGGCTCTGACCAACCAGAACCTGTCTG...AAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp AGAGCCCATCATCCCTCCGCCTTTCATTGCCATCTTCAGCGATTCCAACGGCTGAGCGATTCCAACGGCTaGAGGGAGAGTCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: RAHHPSAFHCHLQRFQRLSDSNG*RESLGS
Trigger: GCTTCCCAGACTCTCCCTCCAGCCGTTGGAATCGCT...CAGCCGTTGGAATCGCTGAAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
3UTR CAA 72 bp CTGCATACTGAGTCGGACCTGTTTCTCCTGCGGGTTTaGAGTCTAAGTCCACAAGGGGCCTGGGAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: LHTESDLFLLRV*SLSPQGAWEAS
Trigger: GCTTGCCTCCCAGGCCCCTTGTGGACTTAGACTCAAAACCCGCAGGAGAAACAGGTCCGACTCAGTATGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR TCA 90 bp AGAGCCCATCATCCCTCCGCCTTTCATTGCCATCTTCAGCGATTCCAACGGCTGCACGAGTGGTCACACTaGCACTCAGCAGAATCACGC +
Preference number: 4 (lower is better)
Translates to: RAHHPSAFHCHLQRFQRLHEWSH*HSAESR
Trigger: GCGTGATTCTGCTGAGTGTCAGTGTGACCACTCGTG...CAGCCGTTGGAATCGCTGAAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR TCA 90 bp TCACAAAATCGGGACGAGAAGCCTTTAATCAGCCAGTTCTCTCTACAGACAGCCCCTGGCGGACAATGCTaGAGAGCTGGGGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SQNRDEKPLISQFSLQTAPGGQC*RAGGGW
Trigger: CCAGCCACCCCCAGCTCTTCAGCATTGTCCGCCAGG...GGCTGTCTGTAGAGAGAACTGGCTGATTAAAGGCTTCTCGTCCCGATTTTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR TCA 90 bp CACCTAGCTGGGGAACAGATTCTTTCACATGGCGGTCAAGGCAAACGAGACAGGGCTGTGTTCATCCTCTaGGCACGCTGTGGGCATCCA +
Preference number: 4 (lower is better)
Translates to: HLAGEQILSHGGQGKRDRAVFIL*ARCGHP
Trigger: TGGATGCCCACAGCGTGCTCAGAGGATGAACACAGC...CCTGTCTCGTTTGCCTTGACCGCCATGTGAAAGAATCTGTTCCCCAGCTAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR TCA 90 bp GGGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTCAAAGTAGAAACGCTTaGATGTTAACCTCGGGAGCA +
Preference number: 4 (lower is better)
Translates to: GTVPLTGLEDPVDSHPCLQSRNA*MLTSGA
Trigger: TGCTCCCGAGGTTAACATTCAAGCGTTTCTACTTTG...AAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp TCACAAAATCGGGACGAGAAGCCTTTAATCAGCCAGTTCTCTCTACAGACAGCCCGTGCAGCACCTCCGTaGAGAAGAGAGTGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: SQNRDEKPLISQFSLQTARAAPP*RRECGG
Trigger: GCCCCCGCACTCTCTTCTGCACGGAGGTGCTGCACG...GGCTGTCTGTAGAGAGAACTGGCTGATTAAAGGCTTCTCGTCCCGATTTTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR GCA 90 bp CCTGGGAGGCAAGCTGTCCTCCTAGTCGTCTCTCCAAGGAGTTTGAACACAGAGAGGACCTGCCTCATGTaGCGGAGGGACTTGAAGACT +
Preference number: 4 (lower is better)
Translates to: PGRQAVLLVVSPRSLNTERTCLM*RRDLKT
Trigger: AGTCTTCAAGTCCCTCCGGCACATGAGGCAGGTCCT...CTCTGTGTTCAAACTCCTTGGAGAGACGACTAGGAGGACAGCTTGCCTCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp TCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTAGGCAGGAGCAGACATGTTATTaGGACTGCATACTGAGTCGG +
Preference number: 4 (lower is better)
Translates to: SLSRGWRILWTAIPVFRQEQTCY*DCILSR
Trigger: CCGACTCAGTATGCAGTCGCAATAACATGTCTGCTC...CTGCCTAAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp AAGGAGCAAAGACCGTCGACCAGGCCAAGCACTTGGCTATCACAAAATCGGGACTGGAGCTCGCAGAAGTaGCAGAGAGCCACGATGGCA +
Preference number: 4 (lower is better)
Translates to: KEQRPSTRPSTWLSQNRDWSSQK*QRATMA
Trigger: TGCCATCGTGGCTCTCTGCCACTTCTGCGAGCTCCA...GTCCCGATTTTGTGATAGCCAAGTGCTTGGCCTGGTCGACGGTCTTTGCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR CCA 90 bp AACAGATTCTTTCACATGGCGGTCAAGGCAAACGAGACAGGAAATCACAACAATTGGGCCCCGGGCTGCTaGACTCGACGCTGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: NRFFHMAVKANETGNHNNWAPGC*TRRWPP
Trigger: AGGGGGCCAGCGTCGAGTCCAGCAGCCCGGGGCCCA...ATTGTTGTGATTTCCTGTCTCGTTTGCCTTGACCGCCATGTGAAAGAATCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR CCA 90 bp CCTGGGAGGCAAGCTGTCCTCCTAGTCGTCTCTCCAAGGAGTTTGAACACAGAGGCGAGCTTCTCCATCTaGACCAAGGTATCCTCGGTC +
Preference number: 4 (lower is better)
Translates to: PGRQAVLLVVSPRSLNTEASFSI*TKVSSV
Trigger: GACCGAGGATACCTTGGTCCAGATGGAGAAGCTCGC...CTCTGTGTTCAAACTCCTTGGAGAGACGACTAGGAGGACAGCTTGCCTCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp TTGAGAAACTCAAGGGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCTACAGGGCTCCCACTaGTCACCACAAACTCGTACT +
Preference number: 4 (lower is better)
Translates to: LRNSRDSPSHGAGGSCGQLQGSH*SPQTRT
Trigger: AGTACGAGTTTGTGGTGACCAGTGGGAGCCCTGTAG...CTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCCCTTGAGTTTCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp CTGGGGAACAGATTCTTTCACATGGCGGTCAAGGCAAACGAGACAGGAAATCACAGGAGAGCAGACAGCTaGTACCGCCCCACGGCCATC +
Preference number: 4 (lower is better)
Translates to: LGNRFFHMAVKANETGNHRRADS*YRPTAI
Trigger: GATGGCCGTGGGGCGGTACCAGCTGTCTGCTCTCCT...GTGATTTCCTGTCTCGTTTGCCTTGACCGCCATGTGAAAGAATCTGTTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389169.9
3UTR CAA 72 bp GAACACAGAGAGAGCCCATCATCCCTCCGCCTTTCATaGCCATCTTCAGCGATTCCAACGGCTGGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: EHRESPSSLRLS*PSSAIPTAGGR
Trigger: TCTCCCTCCAGCCGTTGGAATCGCTGAAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCTCTCTGTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR TCA 90 bp GCCTTTAATCAGCCAGTTCTCTCTACAGACAGCCCACCTGTGAATTTTCCCCACCACCTGTCCTCCTGCTaGGATACGGCTGAGCACGAG +
Preference number: 4 (lower is better)
Translates to: AFNQPVLSTDSPPVNFPHHLSSC*DTAEHE
Trigger: CTCGTGCTCAGCCGTATCTCAGCAGGAGGACAGGTG...GTGGGGAAAATTCACAGGTGGGCTGTCTGTAGAGAGAACTGGCTGATTAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR TCA 90 bp AAATCGGGACGAGAAGCCTTTAATCAGCCAGTTCTCTCTACAGACAGCCCACCTTCATTCCCATCCCCTTaGGGAAGTGGGGCGTGCAGC +
Preference number: 4 (lower is better)
Translates to: KSGREAFNQPVLSTDSPPSFPSP*GSGACS
Trigger: GCTGCACGCCCCACTTCCTCAAGGGGATGGGAATGA...AGGTGGGCTGTCTGTAGAGAGAACTGGCTGATTAAAGGCTTCTCGTCCCGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR TCA 90 bp AGGCCAAGCACTTGGCTATCACAAAATCGGGACGAGAAGCCTTTAATCAGCCAGCCTGGAGCTCATCGATaGTTCCCCGGACCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: RPSTWLSQNRDEKPLISQPGAHR*FPGPSP
Trigger: TGGGGAAGGTCCGGGGAATCATCGATGAGCTCCAGG...CTGGCTGATTAAAGGCTTCTCGTCCCGATTTTGTGATAGCCAAGTGCTTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR TCA 90 bp TCGACCAGGCCAAGCACTTGGCTATCACAAAATCGGGACGAGAAGCCTTTAATCCTGCCTCAAACACCTTaGGCGCCTTGCCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: STRPSTWLSQNRDEKPLILPQTP*APCPGA
Trigger: AGCTCCAGGGCAAGGCGCTCAAGGTGTTTGAGGCAG...GATTAAAGGCTTCTCGTCCCGATTTTGTGATAGCCAAGTGCTTGGCCTGGTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR TCA 90 bp GGAGCAAAGACCGTCGACCAGGCCAAGCACTTGGCTATCACAAAATCGGGACGAGGTGTAGGAATGGCGTaGAGGCTGTGTTCATCCTCT +
Preference number: 4 (lower is better)
Translates to: GAKTVDQAKHLAITKSGRGVGMA*RLCSSS
Trigger: AGAGGATGAACACAGCCTTCACGCCATTCCTACACC...TCGTCCCGATTTTGTGATAGCCAAGTGCTTGGCCTGGTCGACGGTCTTTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR TCA 90 bp TCTCCTGCGGGTTTTGAGTCTAAGTCCACAAGGGGCCTGGGAGGCAAGCTGTCCCAGAGGACCAAAAGATaGGGAAGAGATCCACTTCAC +
Preference number: 4 (lower is better)
Translates to: SPAGFESKSTRGLGGKLSQRTKR*GRDPLH
Trigger: GTGAAGTGGATCTCTTCCTCATCTTTTGGTCCTCTG...GGACAGCTTGCCTCCCAGGCCCCTTGTGGACTTAGACTCAAAACCCGCAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR TCA 90 bp TTGCCGACCCCTCAGCAACCTGTCTTGTGCAAAAATGATCAGGGACTCCATCATCTGAGGTCAGGAGTTTaGGACCAGCCCGGCCAACAC +
Preference number: 4 (lower is better)
Translates to: LPTPQQPVLCKNDQGLHHLRSGV*DQPGQH
Trigger: GTGTTGGCCGGGCTGGTCTCAAACTCCTGACCTCAG...ATGATGGAGTCCCTGATCATTTTTGCACAAGACAGGTTGCTGAGGGGTCGGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR TCA 90 bp AAATCGGGACGAGAAGCCTTTAATCAGCCAGTTCTCTCTACAGACAGCCCACCTACCGAGATCGGAGGGTaGGCTTCCCGAAGGCTCGTT +
Preference number: 4 (lower is better)
Translates to: KSGREAFNQPVLSTDSPPTEIGG*ASRRLV
Trigger: AACGAGCCTTCGGGAAGCTCACCCTCCGATCTCGGT...AGGTGGGCTGTCTGTAGAGAGAACTGGCTGATTAAAGGCTTCTCGTCCCGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR GCA 90 bp ATTCTTTCACATGGCGGTCAAGGCAAACGAGACAGGAAATCACAACAATCACAATGGGTAGGTGGTCGCTaGGGGACCCGGACCGGCGGA +
Preference number: 4 (lower is better)
Translates to: ILSHGGQGKRDRKSQQSQWVGGR*GTRTGG
Trigger: TCCGCCGGTCCGGGTCCCGCAGCGACCACCTACCCA...TTGTGATTGTTGTGATTTCCTGTCTCGTTTGCCTTGACCGCCATGTGAAAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR GCA 90 bp CAAAATCGGGACGAGAAGCCTTTAATCAGCCAGTTCTCTCTACAGACAGCCCACCTTAGCTGCACGAGCTaGTCCGGCACCTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: QNRDEKPLISQFSLQTAHLSCTS*SGTCPP
Trigger: AGGAGGACAGGTGCCGGAGCAGCTCGTGCAGCTAAG...GTGGGCTGTCTGTAGAGAGAACTGGCTGATTAAAGGCTTCTCGTCCCGATTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR GCA 90 bp GACCGTCGACCAGGCCAAGCACTTGGCTATCACAAAATCGGGACGAGAAGCCTTTGGTGCCTTGGAGACTaGAACAGGCCTGACGTTTCT +
Preference number: 4 (lower is better)
Translates to: DRRPGQALGYHKIGTRSLWCLGD*NRPDVS
Trigger: AGAAACGTCAGGCCTGTTGCAGTCTCCAAGGCACCA...AAGGCTTCTCGTCCCGATTTTGTGATAGCCAAGTGCTTGGCCTGGTCGACGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR GCA 90 bp AGAGCCCATCATCCCTCCGCCTTTCATTGCCATCTTCAGCGATTCCAACGGCTGATTGGGCAAGTCAGATaGTTGCCGACCCCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: RAHHPSAFHCHLQRFQRLIGQVR*LPTPQQ
Trigger: TTGCTGAGGGGTCGGCAAGCATCTGACTTGCCCAAT...CAGCCGTTGGAATCGCTGAAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp AGGCCAAGCACTTGGCTATCACAAAATCGGGACGAGAAGCCTTTAATCAGCCAGTCCGCCTGCTCACCCTaGCCAGGACTGTCCTCATTC +
Preference number: 4 (lower is better)
Translates to: RPSTWLSQNRDEKPLISQSACSP*PGLSSF
Trigger: GAATGAGGACAGTCCTGGCCAGGGTGAGCAGGCGGA...CTGGCTGATTAAAGGCTTCTCGTCCCGATTTTGTGATAGCCAAGTGCTTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR CCA 90 bp TCTCCTGCGGGTTTTGAGTCTAAGTCCACAAGGGGCCTGGGAGGCAAGCTGTCCGAGGTCTCTTTATCATaGCTGATATATCCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: SPAGFESKSTRGLGGKLSEVSLS*LIYPGC
Trigger: GCACCCGGGATATATCAGCCATGATAAAGAGACCTC...GGACAGCTTGCCTCCCAGGCCCCTTGTGGACTTAGACTCAAAACCCGCAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp AGGCCAAGCACTTGGCTATCACAAAATCGGGACGAGAAGCCTTTAATCAGCCAGCTCCGGACACAGGCCTaGCGGACAATGCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: RPSTWLSQNRDEKPLISQLRTQA*RTMLKS
Trigger: GCTCTTCAGCATTGTCCGCCAGGCCTGTGTCCGGAG...CTGGCTGATTAAAGGCTTCTCGTCCCGATTTTGTGATAGCCAAGTGCTTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR CCA 90 bp TTGCCGACCCCTCAGCAACCTGTCTTGTGCAAAAATGATCAGGGACTCCATCATCATCTCCGAAGAAGATaGGGCCTTCACGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LPTPQQPVLCKNDQGLHHHLRRR*GLHGQG
Trigger: GCCCTGGCCGTGAAGGCCCCATCTTCTTCGGAGATG...ATGATGGAGTCCCTGATCATTTTTGCACAAGACAGGTTGCTGAGGGGTCGGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp AAATCGGGACGAGAAGCCTTTAATCAGCCAGTTCTCTCTACAGACAGCCCACCTCATCTCCGAAGAAGATaGGGCCTTCACGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: KSGREAFNQPVLSTDSPPHLRRR*GLHGQG
Trigger: GCCCTGGCCGTGAAGGCCCCATCTTCTTCGGAGATG...AGGTGGGCTGTCTGTAGAGAGAACTGGCTGATTAAAGGCTTCTCGTCCCGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR CCA 90 bp AAGGAGCAAAGACCGTCGACCAGGCCAAGCACTTGGCTATCACAAAATCGGGACGCGAGCTTCTCCATCTaGACCAAGGTATCCTCGGTC +
Preference number: 4 (lower is better)
Translates to: KEQRPSTRPSTWLSQNRDASFSI*TKVSSV
Trigger: GACCGAGGATACCTTGGTCCAGATGGAGAAGCTCGC...GTCCCGATTTTGTGATAGCCAAGTGCTTGGCCTGGTCGACGGTCTTTGCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR CCA 90 bp CCTGGGAGGCAAGCTGTCCTCCTAGTCGTCTCTCCAAGGAGTTTGAACACAGAGTCCACAGACAGGTTCTaGTTGGTCAGAGCCGCTTCA +
Preference number: 4 (lower is better)
Translates to: PGRQAVLLVVSPRSLNTESTDRF*LVRAAS
Trigger: TGAAGCGGCTCTGACCAACCAGAACCTGTCTGTGGA...CTCTGTGTTCAAACTCCTTGGAGAGACGACTAGGAGGACAGCTTGCCTCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp AGGAGTTTGAACACAGAGAGAGCCCATCATCCCTCCGCCTTTCATTGCCATCTTAGTCCACAAGGGGCCTaGGAGGCAAGCTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RSLNTERAHHPSAFHCHLSPQGA*EASCPP
Trigger: AGGAGGACAGCTTGCCTCCCAGGCCCCTTGTGGACT...AAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCTCTCTGTGTTCAAACTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp TCTCCTGCGGGTTTTGAGTCTAAGTCCACAAGGGGCCTGGGAGGCAAGCTGTCCAGAAGACGAGCCCCATaGCTTCAGAACACACATTTC +
Preference number: 4 (lower is better)
Translates to: SPAGFESKSTRGLGGKLSRRRAP*LQNTHF
Trigger: GAAATGTGTGTTCTGAAGCCATGGGGCTCGTCTTCT...GGACAGCTTGCCTCCCAGGCCCCTTGTGGACTTAGACTCAAAACCCGCAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp AGAGAGCCCATCATCCCTCCGCCTTTCATTGCCATCTTCAGCGATTCCAACGGCCCATATCCAGGGGATTaGGCAAGTCAGATGCTTGCC +
Preference number: 4 (lower is better)
Translates to: REPIIPPPFIAIFSDSNGPYPGD*ASQMLA
Trigger: GGCAAGCATCTGACTTGCCCAATCCCCTGGATATGG...GCCGTTGGAATCGCTGAAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp CAAAATCGGGACGAGAAGCCTTTAATCAGCCAGTTCTCTCTACAGACAGCCCACCCCGAAGGCTCGTTCTaGGCTGATTCAGAGCCGCGT +
Preference number: 4 (lower is better)
Translates to: QNRDEKPLISQFSLQTAHPEGSF*ADSEPR
Trigger: ACGCGGCTCTGAATCAGCCCAGAACGAGCCTTCGGG...GTGGGCTGTCTGTAGAGAGAACTGGCTGATTAAAGGCTTCTCGTCCCGATTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389169.9
3UTR CAA 72 bp AGGCAAGCTGTCCTCCTAGTCGTCTCTCCAAGGAGTTaGAACACAGAGAGAGCCCATCATCCCTCCGCCTTT +
Preference number: 4 (lower is better)
Translates to: RQAVLLVVSPRS*NTERAHHPSAF
Trigger: AAAGGCGGAGGGATGATGGGCTCTCTCTGTGTTCAAACTCCTTGGAGAGACGACTAGGAGGACAGCTTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR TCA 90 bp AGGAGTTTGAACACAGAGAGAGCCCATCATCCCTCCGCCTTTCATTGCCATCTTGGTGGCAGACACCCTTaGAGACCTGGCGTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: RSLNTERAHHPSAFHCHLGGRHP*RPGVFC
Trigger: GCAGAAAACGCCAGGTCTTCAAGGGTGTCTGCCACC...AAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCTCTCTGTGTTCAAACTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR TCA 90 bp TCGACCAGGCCAAGCACTTGGCTATCACAAAATCGGGACGAGAAGCCTTTAATCGGTGGCAGACACCCTTaGAGACCTGGCGTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: STRPSTWLSQNRDEKPLIGGRHP*RPGVFC
Trigger: GCAGAAAACGCCAGGTCTTCAAGGGTGTCTGCCACC...GATTAAAGGCTTCTCGTCCCGATTTTGTGATAGCCAAGTGCTTGGCCTGGTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR TCA 90 bp AGAGAGCCCATCATCCCTCCGCCTTTCATTGCCATCTTCAGCGATTCCAACGGCAAGTACTTCAAAAGCTaGCTGGACGAGGTCCACGTC +
Preference number: 4 (lower is better)
Translates to: REPIIPPPFIAIFSDSNGKYFKS*LDEVHV
Trigger: GACGTGGACCTCGTCCAGTCAGCTTTTGAAGTACTT...GCCGTTGGAATCGCTGAAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR TCA 90 bp AGAGAGCCCATCATCCCTCCGCCTTTCATTGCCATCTTCAGCGATTCCAACGGCTCTCTCCAAGGAGTTTaGACACAGAGAGAGCCCATC +
Preference number: 4 (lower is better)
Translates to: REPIIPPPFIAIFSDSNGSLQGV*TQREPI
Trigger: GATGGGCTCTCTCTGTGTTCAAACTCCTTGGAGAGA...GCCGTTGGAATCGCTGAAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR TCA 90 bp AGAGCCCATCATCCCTCCGCCTTTCATTGCCATCTTCAGCGATTCCAACGGCTGATTGCGACTGCATACTaGGTCGGACCTGTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: RAHHPSAFHCHLQRFQRLIATAY*VGPVSP
Trigger: AGGAGAAACAGGTCCGACTCAGTATGCAGTCGCAAT...CAGCCGTTGGAATCGCTGAAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp CCAAGCACTTGGCTATCACAAAATCGGGACGAGAAGCCTTTAATCAGCCAGTTCAGTTGGCTGCTTAGCTaGACGAGCTGCTCCGGCACC +
Preference number: 4 (lower is better)
Translates to: PSTWLSQNRDEKPLISQFSWLLS*TSCSGT
Trigger: GGTGCCGGAGCAGCTCGTGCAGCTAAGCAGCCAACT...GAACTGGCTGATTAAAGGCTTCTCGTCCCGATTTTGTGATAGCCAAGTGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR GCA 90 bp CCTGGGAGGCAAGCTGTCCTCCTAGTCGTCTCTCCAAGGAGTTTGAACACAGAGCTGAACACAAAGCCGTaGTGCTCATCTCCGAAGAAG +
Preference number: 4 (lower is better)
Translates to: PGRQAVLLVVSPRSLNTELNTKP*CSSPKK
Trigger: CTTCTTCGGAGATGAGCAGCACGGCTTTGTGTTCAG...CTCTGTGTTCAAACTCCTTGGAGAGACGACTAGGAGGACAGCTTGCCTCCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp TGGGGAACAGATTCTTTCACATGGCGGTCAAGGCAAACGAGACAGGAAATCACACAGGCAAAGGAGGTGTaGAGGCACGCCCACAGGTTG +
Preference number: 4 (lower is better)
Translates to: WGTDSFTWRSRQTRQEITQAKEV*RHAHRL
Trigger: CAACCTGTGGGCGTGCCTGCACACCTCCTTTGCCTG...TGTGATTTCCTGTCTCGTTTGCCTTGACCGCCATGTGAAAGAATCTGTTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR CCA 90 bp GTAAAGGAGCAAAGACCGTCGACCAGGCCAAGCACTTGGCTATCACAAAATCGGCAAATGGGTCAGGCATaGTGGTGGCAGACACCCTTG +
Preference number: 4 (lower is better)
Translates to: VKEQRPSTRPSTWLSQNRQMGQA*WWQTPL
Trigger: CAAGGGTGTCTGCCACCACCATGCCTGACCCATTTG...CCGATTTTGTGATAGCCAAGTGCTTGGCCTGGTCGACGGTCTTTGCTCCTTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR CCA 90 bp AGGAGTTTGAACACAGAGAGAGCCCATCATCCCTCCGCCTTTCATTGCCATCTTCCTCTGAGCACGCTGTaGGCATCCAAACTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: RSLNTERAHHPSAFHCHLPLSTL*ASKLLC
Trigger: GCAGAGCAGTTTGGATGCCCACAGCGTGCTCAGAGG...AAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCTCTCTGTGTTCAAACTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp AAATCGGGACGAGAAGCCTTTAATCAGCCAGTTCTCTCTACAGACAGCCCACCTCCTCTGAGCACGCTGTaGGCATCCAAACTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: KSGREAFNQPVLSTDSPPPLSTL*ASKLLC
Trigger: GCAGAGCAGTTTGGATGCCCACAGCGTGCTCAGAGG...AGGTGGGCTGTCTGTAGAGAGAACTGGCTGATTAAAGGCTTCTCGTCCCGATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR GCA 90 bp CAGCCAGTTCTCTCTACAGACAGCCCACCTGTGAATTTTCCCCACCTAGCTGGGGACTGTTCATCTGAATaGCACCTTCCTCTTCTTCCG +
Preference number: 4 (lower is better)
Translates to: QPVLSTDSPPVNFPHLAGDCSSE*HLPLLP
Trigger: CGGAAGAAGAGGAAGGTGGCATTCAGATGAACAGTC...CCCAGCTAGGTGGGGAAAATTCACAGGTGGGCTGTCTGTAGAGAGAACTGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR GCA 90 bp CCAAGCACTTGGCTATCACAAAATCGGGACGAGAAGCCTTTAATCAGCCAGTTCCTGATATATCCCGGGTaGCCTGCAGCAAGTGACCGG +
Preference number: 4 (lower is better)
Translates to: PSTWLSQNRDEKPLISQFLIYPG*PAASDR
Trigger: CCGGTCACTTGCTGCAGGGCACCCGGGATATATCAG...GAACTGGCTGATTAAAGGCTTCTCGTCCCGATTTTGTGATAGCCAAGTGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR GCA 90 bp AAGGAGCAAAGACCGTCGACCAGGCCAAGCACTTGGCTATCACAAAATCGGGACTGTGGGCATCCAAACTaGTCTGCCTCAAACACCTTG +
Preference number: 4 (lower is better)
Translates to: KEQRPSTRPSTWLSQNRDCGHPN*SASNTL
Trigger: CAAGGTGTTTGAGGCAGAGCAGTTTGGATGCCCACA...GTCCCGATTTTGTGATAGCCAAGTGCTTGGCCTGGTCGACGGTCTTTGCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR CCA 90 bp TCACAAAATCGGGACGAGAAGCCTTTAATCAGCCAGTTCTCTCTACAGACAGCCGGTCAGGCATGGTGGTaGCAGACACCCTTGAAGACC +
Preference number: 4 (lower is better)
Translates to: SQNRDEKPLISQFSLQTAGQAWW*QTPLKT
Trigger: GGTCTTCAAGGGTGTCTGCCACCACCATGCCTGACC...GGCTGTCTGTAGAGAGAACTGGCTGATTAAAGGCTTCTCGTCCCGATTTTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR CCA 90 bp CAAAATCGGGACGAGAAGCCTTTAATCAGCCAGTTCTCTCTACAGACAGCCCACATGGGTCAGGCATGGTaGTGGCAGACACCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: QNRDEKPLISQFSLQTAHMGQAW*WQTPLK
Trigger: CTTCAAGGGTGTCTGCCACCACCATGCCTGACCCAT...GTGGGCTGTCTGTAGAGAGAACTGGCTGATTAAAGGCTTCTCGTCCCGATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR CCA 90 bp CACTTGGCTATCACAAAATCGGGACGAGAAGCCTTTAATCAGCCAGTTCTCTCTGAGGCTGCTGCCAAATaGGTCAGGCATGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: HLAITKSGREAFNQPVLSEAAAK*VRHGGG
Trigger: GCCACCACCATGCCTGACCCATTTGGCAGCAGCCTC...AGAGAGAACTGGCTGATTAAAGGCTTCTCGTCCCGATTTTGTGATAGCCAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR CCA 90 bp CAAAATCGGGACGAGAAGCCTTTAATCAGCCAGTTCTCTCTACAGACAGCCCACGGCAGAGAGCCACGATaGCATTCATGGTGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: QNRDEKPLISQFSLQTAHGREPR*HSWCLG
Trigger: TCCAAGGCACCATGAATGCCATCGTGGCTCTCTGCC...GTGGGCTGTCTGTAGAGAGAACTGGCTGATTAAAGGCTTCTCGTCCCGATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR CCA 90 bp AGGCCAAGCACTTGGCTATCACAAAATCGGGACGAGAAGCCTTTAATCAGCCAGGCGTTGCCGTTCCTCTaGTGTAGGAATGGCGTGAAG +
Preference number: 4 (lower is better)
Translates to: RPSTWLSQNRDEKPLISQALPFL*CRNGVK
Trigger: CTTCACGCCATTCCTACACCAGAGGAACGGCAACGC...CTGGCTGATTAAAGGCTTCTCGTCCCGATTTTGTGATAGCCAAGTGCTTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR CCA 90 bp AAGGAGCAAAGACCGTCGACCAGGCCAAGCACTTGGCTATCACAAAATCGGGACACCAGGCCAAGCACTTaGCTATCACAAAATCGGGAC +
Preference number: 4 (lower is better)
Translates to: KEQRPSTRPSTWLSQNRDTRPST*LSQNRD
Trigger: GTCCCGATTTTGTGATAGCCAAGTGCTTGGCCTGGT...GTCCCGATTTTGTGATAGCCAAGTGCTTGGCCTGGTCGACGGTCTTTGCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR TCA 90 bp TGGGGAACAGATTCTTTCACATGGCGGTCAAGGCAAACGAGACAGGAAATCACACACGAGTGGTCACACTaGCACTCAGCAGAATCACGC +
Preference number: 4 (lower is better)
Translates to: WGTDSFTWRSRQTRQEITHEWSH*HSAESR
Trigger: GCGTGATTCTGCTGAGTGTCAGTGTGACCACTCGTG...TGTGATTTCCTGTCTCGTTTGCCTTGACCGCCATGTGAAAGAATCTGTTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR TCA 90 bp GTAAAGGAGCAAAGACCGTCGACCAGGCCAAGCACTTGGCTATCACAAAATCGGTCTCTTTATCATGGCTaGTATATCCCGGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: VKEQRPSTRPSTWLSQNRSLYHG*YIPGAL
Trigger: CAGGGCACCCGGGATATATCAGCCATGATAAAGAGA...CCGATTTTGTGATAGCCAAGTGCTTGGCCTGGTCGACGGTCTTTGCTCCTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR TCA 90 bp AGAGAGCCCATCATCCCTCCGCCTTTCATTGCCATCTTCAGCGATTCCAACGGCGAGCTGGCAATGTACTaGATATTCACAACTGCAGCA +
Preference number: 4 (lower is better)
Translates to: REPIIPPPFIAIFSDSNGELAMY*IFTTAA
Trigger: TGCTGCAGTTGTGAATATTCAGTACATTGCCAGCTC...GCCGTTGGAATCGCTGAAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp AAGCACTTGGCTATCACAAAATCGGGACGAGAAGCCTTTAATCAGCCAGTTCTCAGACCTGGCGTTTTCTaGTCCCCAAATCGAGGCCCG +
Preference number: 4 (lower is better)
Translates to: KHLAITKSGREAFNQPVLRPGVF*SPNRGP
Trigger: CGGGCCTCGATTTGGGGAGCAGAAAACGCCAGGTCT...GAGAACTGGCTGATTAAAGGCTTCTCGTCCCGATTTTGTGATAGCCAAGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR GCA 90 bp TCTCCTGCGGGTTTTGAGTCTAAGTCCACAAGGGGCCTGGGAGGCAAGCTGTCCCTGAATATTCACAACTaGAGCAAAAGGTACCCTCAA +
Preference number: 4 (lower is better)
Translates to: SPAGFESKSTRGLGGKLSLNIHN*SKRYPQ
Trigger: TTGAGGGTACCTTTTGCTGCAGTTGTGAATATTCAG...GGACAGCTTGCCTCCCAGGCCCCTTGTGGACTTAGACTCAAAACCCGCAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp CAAAATCGGGACGAGAAGCCTTTAATCAGCCAGTTCTCTCTACAGACAGCCCACCCACGATGGCATTCATaGTGCCTTGGAGACTGCAAC +
Preference number: 4 (lower is better)
Translates to: QNRDEKPLISQFSLQTAHPRWHS*CLGDCN
Trigger: GTTGCAGTCTCCAAGGCACCATGAATGCCATCGTGG...GTGGGCTGTCTGTAGAGAGAACTGGCTGATTAAAGGCTTCTCGTCCCGATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR CCA 90 bp CCAAGCACTTGGCTATCACAAAATCGGGACGAGAAGCCTTTAATCAGCCAGTTCTTGAGCGCCTTGCCCTaGAGCTCATCGATGATTCCC +
Preference number: 4 (lower is better)
Translates to: PSTWLSQNRDEKPLISQFLSALP*SSSMIP
Trigger: GGGAATCATCGATGAGCTCCAGGGCAAGGCGCTCAA...GAACTGGCTGATTAAAGGCTTCTCGTCCCGATTTTGTGATAGCCAAGTGCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR CCA 90 bp TTGCCGACCCCTCAGCAACCTGTCTTGTGCAAAAATGATCAGGGACTCCATCATTCTGTGTGTCCTCTTTaGGTCGACTGTCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: LPTPQQPVLCKNDQGLHHSVCPL*VDCPPW
Trigger: CCAAGGTGGACAGTCGACCCAAAGAGGACACACAGA...ATGATGGAGTCCCTGATCATTTTTGCACAAGACAGGTTGCTGAGGGGTCGGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp AGAGCCCATCATCCCTCCGCCTTTCATTGCCATCTTCAGCGATTCCAACGGCTGTACAGAATAAAAGCATaGCGGGGCTCACCATATCCA +
Preference number: 4 (lower is better)
Translates to: RAHHPSAFHCHLQRFQRLYRIKA*RGSPYP
Trigger: TGGATATGGTGAGCCCCGCCATGCTTTTATTCTGTA...CAGCCGTTGGAATCGCTGAAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp TCTTTCACATGGCGGTCAAGGCAAACGAGACAGGAAATCACAACAATCACAACACACCACACACGAGGCTaGTGCCAAATGGGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: SFTWRSRQTRQEITTITTHHTRG*CQMGQA
Trigger: TGCCTGACCCATTTGGCAGCAGCCTCGTGTGTGGTG...TGTTGTGATTGTTGTGATTTCCTGTCTCGTTTGCCTTGACCGCCATGTGAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR GCA 90 bp TCTTTCACATGGCGGTCAAGGCAAACGAGACAGGAAATCACAACAATCACAACATGGGGGTGGCTGGGGTaGTGGTGGCTGACGTATTTA +
Preference number: 4 (lower is better)
Translates to: SFTWRSRQTRQEITTITTWGWLG*WWLTYL
Trigger: TAAATACGTCAGCCACCAGCACCCCAGCCACCCCCA...TGTTGTGATTGTTGTGATTTCCTGTCTCGTTTGCCTTGACCGCCATGTGAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR GCA 90 bp TCGACCAGGCCAAGCACTTGGCTATCACAAAATCGGGACGAGAAGCCTTTAATCCTGAACACAAAGCCGTaGTGCTCATCTCCGAAGAAG +
Preference number: 4 (lower is better)
Translates to: STRPSTWLSQNRDEKPLILNTKP*CSSPKK
Trigger: CTTCTTCGGAGATGAGCAGCACGGCTTTGTGTTCAG...GATTAAAGGCTTCTCGTCCCGATTTTGTGATAGCCAAGTGCTTGGCCTGGTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR GCA 90 bp TTGCCGACCCCTCAGCAACCTGTCTTGTGCAAAAATGATCAGGGACTCCATCATCCCTCCGCCTTTCATTaGCATCTTCAGCGATTCCAA +
Preference number: 4 (lower is better)
Translates to: LPTPQQPVLCKNDQGLHHPSAFH*HLQRFQ
Trigger: TTGGAATCGCTGAAGATGGCAATGAAAGGCGGAGGG...ATGATGGAGTCCCTGATCATTTTTGCACAAGACAGGTTGCTGAGGGGTCGGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp AGGAGTTTGAACACAGAGAGAGCCCATCATCCCTCCGCCTTTCATTGCCATCTTCTCCCCAAAGTCTCTTaGGGAGCCCTAACTCAATCA +
Preference number: 4 (lower is better)
Translates to: RSLNTERAHHPSAFHCHLLPKVS*GALTQS
Trigger: TGATTGAGTTAGGGCTCCGCAAGAGACTTTGGGGAG...AAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCTCTCTGTGTTCAAACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp GTAAAGGAGCAAAGACCGTCGACCAGGCCAAGCACTTGGCTATCACAAAATCGGGAGGTCTCTTTATCATaGCTGATATATCCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: VKEQRPSTRPSTWLSQNREVSLS*LIYPGC
Trigger: GCACCCGGGATATATCAGCCATGATAAAGAGACCTC...CCGATTTTGTGATAGCCAAGTGCTTGGCCTGGTCGACGGTCTTTGCTCCTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR CCA 90 bp AAGCACTTGGCTATCACAAAATCGGGACGAGAAGCCTTTAATCAGCCAGTTCTCGGGTGGCTGGGGTGCTaGTGGCTGACGTATTTAATG +
Preference number: 4 (lower is better)
Translates to: KHLAITKSGREAFNQPVLGWLGC*WLTYLM
Trigger: CATTAAATACGTCAGCCACCAGCACCCCAGCCACCC...GAGAACTGGCTGATTAAAGGCTTCTCGTCCCGATTTTGTGATAGCCAAGTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR GCA 90 bp ATTCTTTCACATGGCGGTCAAGGCAAACGAGACAGGAAATCACAACAATCACAATCCCTCAGCGATTCCTaGCAGGAGAGCAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: ILSHGGQGKRDRKSQQSQSLSDS*QESRQL
Trigger: CAGCTGTCTGCTCTCCTGGCAGGAATCGCTGAGGGA...TTGTGATTGTTGTGATTTCCTGTCTCGTTTGCCTTGACCGCCATGTGAAAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR CCA 90 bp CACTTGGCTATCACAAAATCGGGACGAGAAGCCTTTAATCAGCCAGTTCTCTCTTGGCTGGGGTGCTGGTaGCTGACGTATTTAATGGAG +
Preference number: 4 (lower is better)
Translates to: HLAITKSGREAFNQPVLSWLGCW*LTYLME
Trigger: CTCCATTAAATACGTCAGCCACCAGCACCCCAGCCA...AGAGAGAACTGGCTGATTAAAGGCTTCTCGTCCCGATTTTGTGATAGCCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389169.9
3UTR CAA 72 bp TGTAAAGGAGCAAAGACCGTCGACCAGGCCAAGCACTaGGCTATCACAAAATCGGGACGAGAAGCCTTTAAT +
Preference number: 4 (lower is better)
Translates to: CKGAKTVDQAKH*AITKSGREAFN
Trigger: ATTAAAGGCTTCTCGTCCCGATTTTGTGATAGCCAAGTGCTTGGCCTGGTCGACGGTCTTTGCTCCTTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR CCA 90 bp CACTTGGCTATCACAAAATCGGGACGAGAAGCCTTTAATCAGCCAGTTCTCTCTACACCCTTGAAGACCTaGCGTTTTCTGCTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: HLAITKSGREAFNQPVLSTPLKT*RFLLPK
Trigger: TTTGGGGAGCAGAAAACGCCAGGTCTTCAAGGGTGT...AGAGAGAACTGGCTGATTAAAGGCTTCTCGTCCCGATTTTGTGATAGCCAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR CCA 90 bp AGGCCAAGCACTTGGCTATCACAAAATCGGGACGAGAAGCCTTTAATCAGCCAGTTTTCCCCACCTAGCTaGGGAACAGATTCTTTCACA +
Preference number: 4 (lower is better)
Translates to: RPSTWLSQNRDEKPLISQFSPPS*GTDSFT
Trigger: TGTGAAAGAATCTGTTCCCCAGCTAGGTGGGGAAAA...CTGGCTGATTAAAGGCTTCTCGTCCCGATTTTGTGATAGCCAAGTGCTTGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR TCA 90 bp CTCAAACATAAGGCCCAGAAACTCTTGCTGAATTTCAAAGTAGAAACGCTTGAATCATCCACTCCTCCTTaGGGCAGACGAGGCACTGGT +
Preference number: 4 (lower is better)
Translates to: LKHKAQKLLLNFKVETLESSTPP*GRRGTG
Trigger: ACCAGTGCCTCGTCTGCCTCAAGGAGGAGTGGATGA...TTCAAGCGTTTCTACTTTGAAATTCAGCAAGAGTTTCTGGGCCTTATGTTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp ATTCTTTCACATGGCGGTCAAGGCAAACGAGACAGGAAATCACAACAATCACAAGTTTCTGCAGTTGGCTaGTTAGCTGCACGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: ILSHGGQGKRDRKSQQSQVSAVG*LAARAA
Trigger: AGCAGCTCGTGCAGCTAAGCAGCCAACTGCAGAAAC...TTGTGATTGTTGTGATTTCCTGTCTCGTTTGCCTTGACCGCCATGTGAAAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR GCA 90 bp CTCAAACATAAGGCCCAGAAACTCTTGCTGAATTTCAAAGTAGAAACGCTTGAATGGGGGTGGCTGGGGTaGTGGTGGCTGACGTATTTA +
Preference number: 4 (lower is better)
Translates to: LKHKAQKLLLNFKVETLEWGWLG*WWLTYL
Trigger: TAAATACGTCAGCCACCAGCACCCCAGCCACCCCCA...TTCAAGCGTTTCTACTTTGAAATTCAGCAAGAGTTTCTGGGCCTTATGTTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp CACTTGGCTATCACAAAATCGGGACGAGAAGCCTTTAATCAGCCAGTTCTCTCTAACACAAAGCCGTGCTaGTCATCTCCGAAGAAGATG +
Preference number: 4 (lower is better)
Translates to: HLAITKSGREAFNQPVLSNTKPC*SSPKKM
Trigger: CATCTTCTTCGGAGATGAGCAGCACGGCTTTGTGTT...AGAGAGAACTGGCTGATTAAAGGCTTCTCGTCCCGATTTTGTGATAGCCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR GCA 90 bp CTCAAACATAAGGCCCAGAAACTCTTGCTGAATTTCAAAGTAGAAACGCTTGAACGGACGCACCCAGGATaGTCAGCAGCTTCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: LKHKAQKLLLNFKVETLERTHPG*SAASVC
Trigger: ACACACAGAAGCTGCTGAGCATCCTGGGTGCGTCCG...TTCAAGCGTTTCTACTTTGAAATTCAGCAAGAGTTTCTGGGCCTTATGTTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp CTCAAACATAAGGCCCAGAAACTCTTGCTGAATTTCAAAGTAGAAACGCTTGAAACCTTCACCAGCACCTaGAGGGGAACACCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: LKHKAQKLLLNFKVETLETFTST*RGTPQK
Trigger: CTTCTGGGGTGTTCCCCTGCAGGTGCTGGTGAAGGT...TTCAAGCGTTTCTACTTTGAAATTCAGCAAGAGTTTCTGGGCCTTATGTTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp CCAAGCACTTGGCTATCACAAAATCGGGACGAGAAGCCTTTAATCAGCCAGTTCACAGATTCTTTCACATaGCGGTCAAGGCAAACGAGA +
Preference number: 4 (lower is better)
Translates to: PSTWLSQNRDEKPLISQFTDSFT*RSRQTR
Trigger: TCTCGTTTGCCTTGACCGCCATGTGAAAGAATCTGT...GAACTGGCTGATTAAAGGCTTCTCGTCCCGATTTTGTGATAGCCAAGTGCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR TCA 90 bp TTGCCGACCCCTCAGCAACCTGTCTTGTGCAAAAATGATCAGGGACTCCATCATTGTCTTGTGCAAAAATaGTCAGGGACTCCATCATTA +
Preference number: 4 (lower is better)
Translates to: LPTPQQPVLCKNDQGLHHCLVQK*SGTPSL
Trigger: TAATGATGGAGTCCCTGATCATTTTTGCACAAGACA...ATGATGGAGTCCCTGATCATTTTTGCACAAGACAGGTTGCTGAGGGGTCGGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp CTCAAACATAAGGCCCAGAAACTCTTGCTGAATTTCAAAGTAGAAACGCTTGAAGGGTGGCTGGGGTGCTaGTGGCTGACGTATTTAATG +
Preference number: 4 (lower is better)
Translates to: LKHKAQKLLLNFKVETLEGWLGC*WLTYLM
Trigger: CATTAAATACGTCAGCCACCAGCACCCCAGCCACCC...TTCAAGCGTTTCTACTTTGAAATTCAGCAAGAGTTTCTGGGCCTTATGTTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR TCA 90 bp CTCAAACATAAGGCCCAGAAACTCTTGCTGAATTTCAAAGTAGAAACGCTTGAAAACTCAATCACTCAGTaGCCAAGAGCTGGCAATGTA +
Preference number: 4 (lower is better)
Translates to: LKHKAQKLLLNFKVETLENSITQ*PRAGNV
Trigger: TACATTGCCAGCTCTTGGTCACTGAGTGATTGAGTT...TTCAAGCGTTTCTACTTTGAAATTCAGCAAGAGTTTCTGGGCCTTATGTTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp CTCAAACATAAGGCCCAGAAACTCTTGCTGAATTTCAAAGTAGAAACGCTTGAAACATGTTATTGCGACTaGATACTGAGTCGGACCTGT +
Preference number: 4 (lower is better)
Translates to: LKHKAQKLLLNFKVETLETCYCD*ILSRTC
Trigger: ACAGGTCCGACTCAGTATGCAGTCGCAATAACATGT...TTCAAGCGTTTCTACTTTGAAATTCAGCAAGAGTTTCTGGGCCTTATGTTTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp CTCAAACATAAGGCCCAGAAACTCTTGCTGAATTTCAAAGTAGAAACGCTTGAACAGCAACCTGTCTTGTaGAAAAATGATCAGGGACTC +
Preference number: 4 (lower is better)
Translates to: LKHKAQKLLLNFKVETLEQQPVL*KNDQGL
Trigger: GAGTCCCTGATCATTTTTGCACAAGACAGGTTGCTG...TTCAAGCGTTTCTACTTTGAAATTCAGCAAGAGTTTCTGGGCCTTATGTTTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CCA 90 bp CTCAAACATAAGGCCCAGAAACTCTTGCTGAATTTCAAAGTAGAAACGCTTGAATCAGTGACCAAGAGCTaGCAATGTACTGAATATTCA +
Preference number: 4 (lower is better)
Translates to: LKHKAQKLLLNFKVETLESVTKS*QCTEYS
Trigger: TGAATATTCAGTACATTGCCAGCTCTTGGTCACTGA...TTCAAGCGTTTCTACTTTGAAATTCAGCAAGAGTTTCTGGGCCTTATGTTTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR GCA 90 bp CTCAAACATAAGGCCCAGAAACTCTTGCTGAATTTCAAAGTAGAAACGCTTGAAGTGTTCCAATGTTGTTaGATTATACAGATACCTAGT +
Preference number: 4 (lower is better)
Translates to: LKHKAQKLLLNFKVETLEVFQCC*IIQIPS
Trigger: ACTAGGTATCTGTATAATGCAACAACATTGGAACAC...TTCAAGCGTTTCTACTTTGAAATTCAGCAAGAGTTTCTGGGCCTTATGTTTGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS CCA 90 bp GGGGTGGCGAGGCTCTCAAGCCCGGGTTCAGGCTCTCAGGGGAGCTaGCAGAACCAGGAGCGACCACACTCACTCGCGGTCCCGCAGCCC +
Preference number: 5 (lower is better)
Translates to: GVARLSSPGSGSQGS*QNQERPHSLAVPQP
Trigger: GGGCTGCGGGACCGCGAGTGAGTGTGGTCGCTCCTGGTTCTGCCAGCTCCCCTGAGAGCCTGAACCCGGGCTTGAGAGCCTCGCCACCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285071.9
ENST00000389171.4
ENST00000417064.1
CDS CCA 90 bp CCGCGTTTCCCTCCCTCAGCGATTCCTGCCAGGAGAGCAGACAGCTaGTACCGCCCCACGGCCATCCGGGCCAAGGCCCCGGCAACAGCA +
Preference number: 5 (lower is better)
Translates to: PRFPPSAIPARRADS*YRPTAIRAKAPATA
Trigger: TGCTGTTGCCGGGGCCTTGGCCCGGATGGCCGTGGGGCGGTACCAGCTGTCTGCTCTCCTGGCAGGAATCGCTGAGGGAGGGAAACGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389169.9
ENST00000466317.1
CDS TCA 90 bp GAGTGCGGAGCAGTGAGCAGGGGAGAAGGCCCAGTGAGTGCCTGCTaGGCCTTCACGGGGACGGGACACAGCAGCAGAGCCAAGCGCTGC +
Preference number: 5 (lower is better)
Translates to: ECGAVSRGEGPVSAC*AFTGTGHSSRAKRC
Trigger: GCAGCGCTTGGCTCTGCTGCTGTGTCCCGTCCCCGTGAAGGCTCAGCAGGCACTCACTGGGCCTTCTCCCCTGCTCACTGCTCCGCACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389168.6
CDS GCA 90 bp GGGTGCAGAGTGCGGAGCAGTGAGCAGGGGAGAAGGCCCAGTGAGTaGCTGCTGAGCCTTCACGGGGACGGGACACAGCAGCAGAGCCAA +
Preference number: 5 (lower is better)
Translates to: GCRVRSSEQGRRPSE*LLSLHGDGTQQQSQ
Trigger: TTGGCTCTGCTGCTGTGTCCCGTCCCCGTGAAGGCTCAGCAGGCACTCACTGGGCCTTCTCCCCTGCTCACTGCTCCGCACTCTGCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389168.6
CDS CCA 90 bp CTCACCCTGGCCAGGACTGTCCTCATTCCCATCCCCTTGAGGAAGTaGGGCGTGCAGCACCTCCGTGCAGAAGAGAGTGCGGGGGCCGTG +
Preference number: 5 (lower is better)
Translates to: LTLARTVLIPIPLRK*GVQHLRAEESAGAV
Trigger: CACGGCCCCCGCACTCTCTTCTGCACGGAGGTGCTGCACGCCCCACTTCCTCAAGGGGATGGGAATGAGGACAGTCCTGGCCAGGGTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000285071.9
ENST00000389168.6
ENST00000389169.9
ENST00000389171.4
CDS CCA 90 bp TGCCAGCTCCCACAGCCTGAGAGAGAGGAGGACTCTGCCGGGCCCTaGGTCAGCTCCCGCCCTTCTGTACTCTCTGGCAACACAGGGGCT +
Preference number: 5 (lower is better)
Translates to: CQLPQPEREEDSAGP*VSSRPSVLSGNTGA
Trigger: AGCCCCTGTGTTGCCAGAGAGTACAGAAGGGCGGGAGCTGACCCAGGGCCCGGCAGAGTCCTCCTCTCTCTCAGGCTGTGGGAGCTGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS CCA 90 bp GGCCGTGGAGCTCGCAGAAGTGGCAGAGAGCCACGATGGCATTCATaGTGCCTTGGAGACTGCAACAGGCCTCCTGCAGGGGGTCGGCGG +
Preference number: 5 (lower is better)
Translates to: GRGARRSGREPRWHS*CLGDCNRPPAGGRR
Trigger: CCGCCGACCCCCTGCAGGAGGCCTGTTGCAGTCTCCAAGGCACCATGAATGCCATCGTGGCTCTCTGCCACTTCTGCGAGCTCCACGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461699.1
CDS TCA 90 bp GGAAAGAAGGGGCACCCAGGACCTGCCTCATGTGCCGGAGGGACTTaGAGACTGGCAGCTTCCGGGGCTGCCAGCTCCCACAGCCTGAGA +
Preference number: 5 (lower is better)
Translates to: GKKGHPGPASCAGGT*RLAASGAASSHSLR
Trigger: TCTCAGGCTGTGGGAGCTGGCAGCCCCGGAAGCTGCCAGTCTTCAAGTCCCTCCGGCACATGAGGCAGGTCCTGGGTGCCCCTTCTTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285071.9
ENST00000577591.1
CDS GCA 90 bp AGCCAAGCGCTGCGGTCGGGGCTGACGCATGGGACCTCCGTGGAGTaGAGCCCTTGTAGACTCAGAGGTGGAGAAGGGAGGACAGCTAGC +
Preference number: 5 (lower is better)
Translates to: SQALRSGLTHGTSVE*SPCRLRGGEGRTAS
Trigger: GCTAGCTGTCCTCCCTTCTCCACCTCTGAGTCTACAAGGGCTGCACTCCACGGAGGTCCCATGCGTCAGCCCCGACCGCAGCGCTTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389168.6
CDS CCA 90 bp GGCCCCGGCAACAGCACCCCTGCCTCACCAGCGAGCTTCTCCATCTaGACCAAGGTATCCTCGGTCGGAGCACCTTCCAGGAGCTTCTCG +
Preference number: 5 (lower is better)
Translates to: GPGNSTPASPASFSI*TKVSSVGAPSRSFS
Trigger: CGAGAAGCTCCTGGAAGGTGCTCCGACCGAGGATACCTTGGTCCAGATGGAGAAGCTCGCTGGTGAGGCAGGGGTGCTGTTGCCGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389169.9
ENST00000466317.1
CDS CCA 90 bp GAGTGCGGGGGCCGTGGAGCTCGCAGAAGTGGCAGAGAGCCACGATaGCATTCATGGTGCCTTGGAGACTGCAACAGGCCTGCGTGGGAC +
Preference number: 5 (lower is better)
Translates to: ECGGRGARRSGREPR*HSWCLGDCNRPAWD
Trigger: GTCCCACGCAGGCCTGTTGCAGTCTCCAAGGCACCATGAATGCCATCGTGGCTCTCTGCCACTTCTGCGAGCTCCACGGCCCCCGCACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389168.6
CDS CCA 90 bp CCAGAGCACCTGGGAGCATGTGGGCTCCCACAGAGACAGGCTCTGTaGCCACAAGGCTCACCTCACAGCTCAGGCTCCGGACACAGGCCT +
Preference number: 5 (lower is better)
Translates to: PEHLGACGLPQRQAL*PQGSPHSSGSGHRP
Trigger: AGGCCTGTGTCCGGAGCCTGAGCTGTGAGGTGAGCCTTGTGGCCACAGAGCCTGTCTCTGTGGGAGCCCACATGCTCCCAGGTGCTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389168.6
ENST00000389171.4
CDS CCA 90 bp GAGTGCGGGGGCCGTGGAGCTCGCAGAAGTGGCAGAGAGCCACGATaGCATTCATGGTGCCTTGGAGACTGCAACAGGCCTCCTGCAGGG +
Preference number: 5 (lower is better)
Translates to: ECGGRGARRSGREPR*HSWCLGDCNRPPAG
Trigger: CCCTGCAGGAGGCCTGTTGCAGTCTCCAAGGCACCATGAATGCCATCGTGGCTCTCTGCCACTTCTGCGAGCTCCACGGCCCCCGCACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461699.1
CDS TCA 90 bp GGAGGATCCTGTGGACAGCCATCCCTGTCTTTAGGCAGGTGTGTGTaGCGGGTCAGTTCCGAGACTCCGAGGCTGTGGGGCTGCGGACCG +
Preference number: 5 (lower is better)
Translates to: GGSCGQPSLSLGRCV*RVSSETPRLWGCGP
Trigger: CGGTCCGCAGCCCCACAGCCTCGGAGTCTCGGAACTGACCCGTCACACACACCTGCCTAAAGACAGGGATGGCTGTCCACAGGATCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS GCA 90 bp CCCCCTCTGCGGGGCTGTGCGCACGCATCCGACTGTTCATCTGAATaGCACCTTCCTCTTCTTCCGCCTGCTCACCCTGGCCAGGACTGT +
Preference number: 5 (lower is better)
Translates to: PPLRGCAHASDCSSE*HLPLLPPAHPGQDC
Trigger: ACAGTCCTGGCCAGGGTGAGCAGGCGGAAGAAGAGGAAGGTGGCATTCAGATGAACAGTCGGATGCGTGCGCACAGCCCCGCAGAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000285071.9
ENST00000389168.6
ENST00000389169.9
ENST00000389171.4
CDS CCA 90 bp TCATCCTCACACCCCACAGGGTGGAGGGTGGAACGTGCGGCTGCGTaGACCTCCACGATGACAGCAAACTCTGAGGAGAGCACGTGGGGG +
Preference number: 5 (lower is better)
Translates to: SSSHPTGWRVERAAA*TSTMTANSEESTWG
Trigger: CCCCCACGTGCTCTCCTCAGAGTTTGCTGTCATCGTGGAGGTCCACGCAGCCGCACGTTCCACCCTCCACCCTGTGGGGTGTGAGGATGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS CCA 90 bp TGTGCAATGCTGGCTCCGAGCCCACCCAGAGCACCTGGGAGCATGTaGGCTCCCACAGAGACAGGCTCTGTGGCCACAAGGCTCACCTCA +
Preference number: 5 (lower is better)
Translates to: CAMLAPSPPRAPGSM*APTETGSVATRLTS
Trigger: TGAGGTGAGCCTTGTGGCCACAGAGCCTGTCTCTGTGGGAGCCCACATGCTCCCAGGTGCTCTGGGTGGGCTCGGAGCCAGCATTGCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389168.6
ENST00000389171.4
CDS CCA 90 bp AAGCCGCTAACTCTAGGAAGAAGCAAAGGACGATGTGCATGGTGGTaGGGGGTGCTGCAGCCAGCCTCTCTGCCGGCGGCCCATGCCTGG +
Preference number: 5 (lower is better)
Translates to: KPLTLGRSKGRCAWW*GVLQPASLPAAHAW
Trigger: CCAGGCATGGGCCGCCGGCAGAGAGGCTGGCTGCAGCACCCCCCACCACCATGCACATCGTCCTTTGCTTCTTCCTAGAGTTAGCGGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473853.1
CDS GCA 90 bp CAGCCTCTCTGCCGGCGGCCCATGCCTGGAACTGCTTCTTCAGCATaGCTGCGAATGCACCACCCACCTGACGTTTCTGCAGTTGGCTGC +
Preference number: 5 (lower is better)
Translates to: QPLCRRPMPGTASSA*LRMHHPPDVSAVGC
Trigger: GCAGCCAACTGCAGAAACGTCAGGTGGGTGGTGCATTCGCAGGCATGCTGAAGAAGCAGTTCCAGGCATGGGCCGCCGGCAGAGAGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473853.1
CDS CCA 90 bp CAGCTCAGGCTCCGGACACAGGCCTGGCGGACAATGCTGAAGAGCTaGGGGTGGCTGGGGTGCTGGTGGCTGACGTATTTAATGGAGGTC +
Preference number: 5 (lower is better)
Translates to: QLRLRTQAWRTMLKS*GWLGCWWLTYLMEV
Trigger: GACCTCCATTAAATACGTCAGCCACCAGCACCCCAGCCACCCCCAGCTCTTCAGCATTGTCCGCCAGGCCTGTGTCCGGAGCCTGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285071.9
ENST00000389168.6
ENST00000389169.9
ENST00000389171.4
ENST00000417064.1
CDS CCA 90 bp GGCCGTGGAGCTCGCAGAAGTGGCAGAGAGCCACGATGGCATTCATaGTGCCTTGGAGACTGCAACAGGCCTGCGTGGGACAGGGGACAT +
Preference number: 5 (lower is better)
Translates to: GRGARRSGREPRWHS*CLGDCNRPAWDRGH
Trigger: ATGTCCCCTGTCCCACGCAGGCCTGTTGCAGTCTCCAAGGCACCATGAATGCCATCGTGGCTCTCTGCCACTTCTGCGAGCTCCACGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389168.6
CDS CCA 90 bp TCCCTGATGGAAAGCTTGGCCAAGACTGGCCCAGTGCTTCCAGGCTaGTGCACACAGTGCCACGATCCCCAAACACAGGGCCCCAAGCCC +
Preference number: 5 (lower is better)
Translates to: SLMESLAKTGPVLPG*CTQCHDPQTQGPKP
Trigger: GGGCTTGGGGCCCTGTGTTTGGGGATCGTGGCACTGTGTGCACCAGCCTGGAAGCACTGGGCCAGTCTTGGCCAAGCTTTCCATCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS GCA 90 bp GCATGCCTGCGAATGCACCACCCACCTGACGTTTCTGCAGTTGGCTaGTTAGCTGCACGAGCTGCTCCGGCACCTGTCCTCCTGCTGAGA +
Preference number: 5 (lower is better)
Translates to: ACLRMHHPPDVSAVG*LAARAAPAPVLLLR
Trigger: TCTCAGCAGGAGGACAGGTGCCGGAGCAGCTCGTGCAGCTAAGCAGCCAACTGCAGAAACGTCAGGTGGGTGGTGCATTCGCAGGCATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473853.1
CDS CCA 90 bp GAGTGCGGGGGCCGTGGAGCTCGCAGAAGTGGCAGAGAGCCACGATaGCATTCATGGTGCCTTGGAGACTGCAACAGGCCTGACGTTTCT +
Preference number: 5 (lower is better)
Translates to: ECGGRGARRSGREPR*HSWCLGDCNRPDVS
Trigger: AGAAACGTCAGGCCTGTTGCAGTCTCCAAGGCACCATGAATGCCATCGTGGCTCTCTGCCACTTCTGCGAGCTCCACGGCCCCCGCACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000285071.9
ENST00000389169.9
ENST00000389171.4
CDS CCA 90 bp CCCCAGGAAGTTGCACCGATAGGCCTCCTCGTACTGGCTGCTGTATaGGATGATGCGGACGCAGCCCACGGGAAGCATGGTCCGAAGTAC +
Preference number: 5 (lower is better)
Translates to: PQEVAPIGLLVLAAV*DDADAAHGKHGPKY
Trigger: GTACTTCGGACCATGCTTCCCGTGGGCTGCGTCCGCATCATCCCATACAGCAGCCAGTACGAGGAGGCCTATCGGTGCAACTTCCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS TCA 90 bp TCAGCGAGCGGGCGGCGTTGCCGTTCCTCTGGTGTAGGAATGGCGTaGAGGCTGTGTTCATCCTCTGAGCACGCTGTGGGCATCCAAACT +
Preference number: 5 (lower is better)
Translates to: SASGRRCRSSGVGMA*RLCSSSEHAVGIQT
Trigger: AGTTTGGATGCCCACAGCGTGCTCAGAGGATGAACACAGCCTTCACGCCATTCCTACACCAGAGGAACGGCAACGCCGCCCGCTCGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285071.9
ENST00000389169.9
ENST00000466317.1
ENST00000480316.1
CDS TCA 90 bp CCGAGACTCCGAGGCTGTGGGGCTGCGGACCGTGGACATGAGGTGTaGCTTGTAGGTCTTGCTCAGGCCAGTCATCCAGAACTTCAGCAG +
Preference number: 5 (lower is better)
Translates to: PRLRGCGAADRGHEV*LVGLAQASHPELQQ
Trigger: CTGCTGAAGTTCTGGATGACTGGCCTGAGCAAGACCTACAAGTCACACCTCATGTCCACGGTCCGCAGCCCCACAGCCTCGGAGTCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS TCA 90 bp TCCAGGATGCGAAGCCAGGTCTGTCTGATGCCAAAGGGCAAGCCCTaGGCCCGAAACCCCATACTGCGCATGCCCAGCACACCTGCGTTT +
Preference number: 5 (lower is better)
Translates to: SRMRSQVCLMPKGKP*ARNPILRMPSTPAF
Trigger: AAACGCAGGTGTGCTGGGCATGCGCAGTATGGGGTTTCGGGCTCAGGGCTTGCCCTTTGGCATCAGACAGACCTGGCTTCGCATCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS GCA 90 bp CAAGCCCTGAGCCCGAAACCCCATACTGCGCATGCCCAGCACACCTaGGTTTCCAGCTCTCACAAAGGCTTCGACAGACCTGGCTCTTCG +
Preference number: 5 (lower is better)
Translates to: QALSPKPHTAHAQHT*VSSSHKGFDRPGSS
Trigger: CGAAGAGCCAGGTCTGTCGAAGCCTTTGTGAGAGCTGGAAACGCAGGTGTGCTGGGCATGCGCAGTATGGGGTTTCGGGCTCAGGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS CCA 90 bp ACACCAGACCACCACACACGAGGCTGCTGCCAAATGGGTCAGGCATaGTGGTGGCAGACACCCTTGAAGACCTGGCGTTTTCTGCTCCCC +
Preference number: 5 (lower is better)
Translates to: TPDHHTRGCCQMGQA*WWQTPLKTWRFLLP
Trigger: GGGGAGCAGAAAACGCCAGGTCTTCAAGGGTGTCTGCCACCACCATGCCTGACCCATTTGGCAGCAGCCTCGTGTGTGGTGGTCTGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285071.9
ENST00000389169.9
ENST00000389171.4
CDS CCA 90 bp GGCCGTGGAGCTCGCAGAAGTGGCAGAGAGCCACGATGGCATTCATaGTGCCTTGGAGACTGCAACAGGCCTGACGTTTCTGCAGTTGGC +
Preference number: 5 (lower is better)
Translates to: GRGARRSGREPRWHS*CLGDCNRPDVSAVG
Trigger: GCCAACTGCAGAAACGTCAGGCCTGTTGCAGTCTCCAAGGCACCATGAATGCCATCGTGGCTCTCTGCCACTTCTGCGAGCTCCACGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285071.9
ENST00000389169.9
ENST00000389171.4
CDS CCA 90 bp AACTCGTACTTGCTGAGAGACTGGTCATCCTCACACCCCACAGGGTaGAGGGTGGAACGTGCGGCTGCGTGGACCTCCACGATGACAGCA +
Preference number: 5 (lower is better)
Translates to: NSYLLRDWSSSHPTG*RVERAAAWTSTMTA
Trigger: TGCTGTCATCGTGGAGGTCCACGCAGCCGCACGTTCCACCCTCCACCCTGTGGGGTGTGAGGATGACCAGTCTCTCAGCAAGTACGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS CCA 90 bp ACAGGGCTCCCACTGGTCACCACAAACTCGTACTTGCTGAGAGACTaGTCATCCTCACACCCCACAGGGTGGAGGGTGGAACGTGCGGCT +
Preference number: 5 (lower is better)
Translates to: TGLPLVTTNSYLLRD*SSSHPTGWRVERAA
Trigger: AGCCGCACGTTCCACCCTCCACCCTGTGGGGTGTGAGGATGACCAGTCTCTCAGCAAGTACGAGTTTGTGGTGACCAGTGGGAGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS CCA 90 bp ACAATCACACCGAGATCGGAGGGTGAGCTTCCCGAAGGCTCGTTCTaGGCTGATTCAGAGCCGCGTTTCCCTCCCTCAGCGATTCCTGCC +
Preference number: 5 (lower is better)
Translates to: TITPRSEGELPEGSF*ADSEPRFPPSAIPA
Trigger: GGCAGGAATCGCTGAGGGAGGGAAACGCGGCTCTGAATCAGCCCAGAACGAGCCTTCGGGAAGCTCACCCTCCGATCTCGGTGTGATTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389169.9
ENST00000466317.1
CDS-3UTR CAA 90 bp TCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTAGGCAGGGCATTCATGGTGCCTaGGAGACTGCAACAGGCCTG +
Preference number: 5 (lower is better)
Translates to: SLSRGWRILWTAIPVFRQGIHGA*ETATGL
Trigger: CAGGCCTGTTGCAGTCTCCAAGGCACCATGAATGCC...CTGCCTAAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CAA 90 bp TTGAGAAACTCAAGGGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCACATGTCCGACTTTTaGGGCCCCGGGCTGCTGGAC +
Preference number: 5 (lower is better)
Translates to: LRNSRDSPSHGAGGSCGQHMSDF*GPGLLD
Trigger: GTCCAGCAGCCCGGGGCCCAAAAAGTCGGACATGTG...CTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCCCTTGAGTTTCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CAA 90 bp TCTCCTGCGGGTTTTGAGTCTAAGTCCACAAGGGGCCTGGGAGGCAAGCTGTCCATGTGCCGGAGGGACTaGAAGACTGGCAGCTTCCGG +
Preference number: 5 (lower is better)
Translates to: SPAGFESKSTRGLGGKLSMCRRD*KTGSFR
Trigger: CCGGAAGCTGCCAGTCTTCAAGTCCCTCCGGCACAT...GGACAGCTTGCCTCCCAGGCCCCTTGTGGACTTAGACTCAAAACCCGCAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS TCA 90 bp GTCAGTTCCGAGACTCCGAGGCTGTGGGGCTGCGGACCGTGGACATaGGGTGTGACTTGTAGGTCTTGCTCAGGCCAGTCATCCAGAACT +
Preference number: 5 (lower is better)
Translates to: VSSETPRLWGCGPWT*GVTCRSCSGQSSRT
Trigger: AGTTCTGGATGACTGGCCTGAGCAAGACCTACAAGTCACACCTCATGTCCACGGTCCGCAGCCCCACAGCCTCGGAGTCTCGGAACTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS TCA 90 bp GCCAGCAGCTCGGACCCCTACTCGTTCACAGCCAACTCCAGGACCTaGCTCCTGGAGGATCAGTCCCACTATACTCTCTCCATGCAGAGC +
Preference number: 5 (lower is better)
Translates to: ASSSDPYSFTANSRT*LLEDQSHYTLSMQS
Trigger: GCTCTGCATGGAGAGAGTATAGTGGGACTGATCCTCCAGGAGTCAGGTCCTGGAGTTGGCTGTGAACGAGTAGGGGTCCGAGCTGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS TCA 90 bp GGGTGCACGTCAGAAGCAAATCCAGGATGCGAAGCCAGGTCTGTCTaGTGCCAAAGGGCAAGCCCTGAGCCCGAAACCCCATACTGCGCA +
Preference number: 5 (lower is better)
Translates to: GCTSEANPGCEARSV*CQRASPEPETPYCA
Trigger: TGCGCAGTATGGGGTTTCGGGCTCAGGGCTTGCCCTTTGGCATCAGACAGACCTGGCTTCGCATCCTGGATTTGCTTCTGACGTGCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS GCA 90 bp GCCAGGCTGTCCTTGATGAAGAAGGTGTGGCTGAACACAAAGCCGTaGTGCTCATCTCCGAAGAAGATGGGGCCTTCACGGCCAGGGCAG +
Preference number: 5 (lower is better)
Translates to: ARLSLMKKVWLNTKP*CSSPKKMGPSRPGQ
Trigger: CTGCCCTGGCCGTGAAGGCCCCATCTTCTTCGGAGATGAGCAGCACGGCTTTGTGTTCAGCCACACCTTCTTCATCAAGGACAGCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285071.9
ENST00000389169.9
ENST00000417064.1
ENST00000480316.1
CDS GCA 90 bp CCTTGGCATCCCCACCTGACGCCAGGCACCAGGCCAATACTGCCCTaGGCCGCACACCTAAGGAAAAGATGTTCTCACCCGAAGTACTTC +
Preference number: 5 (lower is better)
Translates to: PWHPHLTPGTRPILP*AAHLRKRCSHPKYF
Trigger: GAAGTACTTCGGGTGAGAACATCTTTTCCTTAGGTGTGCGGCGCAGGGCAGTATTGGCCTGGTGCCTGGCGTCAGGTGGGGATGCCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577591.1
CDS CCA 90 bp GACCACCACACACGAGGCTGCTGCCAAATGGGTCAGGCATGGTGGTaGCAGACACCCTTGAAGACCTGGCGTTTTCTGCTCCCCAAATCG +
Preference number: 5 (lower is better)
Translates to: DHHTRGCCQMGQAWW*QTPLKTWRFLLPKS
Trigger: CGATTTGGGGAGCAGAAAACGCCAGGTCTTCAAGGGTGTCTGCCACCACCATGCCTGACCCATTTGGCAGCAGCCTCGTGTGTGGTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285071.9
ENST00000389169.9
ENST00000389171.4
CDS CCA 90 bp CCAGACCACCACACACGAGGCTGCTGCCAAATGGGTCAGGCATGGTaGTGGCAGACACCCTTGAAGACCTGGCGTTTTCTGCTCCCCAAA +
Preference number: 5 (lower is better)
Translates to: PDHHTRGCCQMGQAW*WQTPLKTWRFLLPK
Trigger: TTTGGGGAGCAGAAAACGCCAGGTCTTCAAGGGTGTCTGCCACCACCATGCCTGACCCATTTGGCAGCAGCCTCGTGTGTGGTGGTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285071.9
ENST00000389169.9
ENST00000389171.4
CDS CCA 90 bp AGGCTCCGGACACAGGCCTGGCGGACAATGCTGAAGAGCTGGGGGTaGCTGGGGTGCTGGTGGCTGACGTATTTAATGGAGGTCTCTTTA +
Preference number: 5 (lower is better)
Translates to: RLRTQAWRTMLKSWG*LGCWWLTYLMEVSL
Trigger: TAAAGAGACCTCCATTAAATACGTCAGCCACCAGCACCCCAGCCACCCCCAGCTCTTCAGCATTGTCCGCCAGGCCTGTGTCCGGAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000285071.9
ENST00000389168.6
ENST00000389169.9
ENST00000389171.4
ENST00000417064.1
CDS CCA 90 bp CAGCGCTGGAAGCCCCTGGCCAGGCTGTCCTTGATGAAGAAGGTGTaGCTGAACACAAAGCCGTGCTGCTCATCTCCGAAGAAGATGGGG +
Preference number: 5 (lower is better)
Translates to: QRWKPLARLSLMKKV*LNTKPCCSSPKKMG
Trigger: CCCCATCTTCTTCGGAGATGAGCAGCACGGCTTTGTGTTCAGCCACACCTTCTTCATCAAGGACAGCCTGGCCAGGGGCTTCCAGCGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285071.9
ENST00000389169.9
ENST00000417064.1
ENST00000480316.1
CDS CCA 90 bp GAGAAACTCAAGGGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTaGACAGCCATCCCTGTCTTTAGGCAGGTGTGTGTGACGGGTCAG +
Preference number: 5 (lower is better)
Translates to: EKLKGQSLSRGWRIL*TAIPVFRQVCVTGQ
Trigger: CTGACCCGTCACACACACCTGCCTAAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCCCTTGAGTTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS CCA 90 bp AGCTCGCAGAAGTGGCAGAGAGCCACGATGGCATTCATGGTGCCTTaGAGACTGCAACAGGCCTGCGTGGGACAGGGGACATGTCAGCTT +
Preference number: 5 (lower is better)
Translates to: SSQKWQRATMAFMVP*RLQQACVGQGTCQL
Trigger: AAGCTGACATGTCCCCTGTCCCACGCAGGCCTGTTGCAGTCTCCAAGGCACCATGAATGCCATCGTGGCTCTCTGCCACTTCTGCGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389168.6
CDS TCA 90 bp GGAAGTTGCACCGATAGGCCTCCTCGTACTGGCTGCTGTATGGGATaGTGCGGACGCAGCCCACGGGAAGCATGGTCCGAAGTACTTCAA +
Preference number: 5 (lower is better)
Translates to: GSCTDRPPRTGCCMG*CGRSPREAWSEVLQ
Trigger: TTGAAGTACTTCGGACCATGCTTCCCGTGGGCTGCGTCCGCATCATCCCATACAGCAGCCAGTACGAGGAGGCCTATCGGTGCAACTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS GCA 90 bp AGGCTGTCCTTGATGAAGAAGGTGTGGCTGAACACAAAGCCGTGCTaGTCATCTCCGAAGAAGATGGGGCCTTCACGGCCAGGGCAGACC +
Preference number: 5 (lower is better)
Translates to: RLSLMKKVWLNTKPC*SSPKKMGPSRPGQT
Trigger: GGTCTGCCCTGGCCGTGAAGGCCCCATCTTCTTCGGAGATGAGCAGCACGGCTTTGTGTTCAGCCACACCTTCTTCATCAAGGACAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285071.9
ENST00000389169.9
ENST00000417064.1
ENST00000480316.1
CDS GCA 90 bp AGAAGTGGCAGAGAGCCACGATGGCATTCATGGTGCCTTGGAGACTaGAACAGGCCTGCGTGGGACAGGGGACATGTCAGCTTGCCAATG +
Preference number: 5 (lower is better)
Translates to: RSGREPRWHSWCLGD*NRPAWDRGHVSLPM
Trigger: CATTGGCAAGCTGACATGTCCCCTGTCCCACGCAGGCCTGTTGCAGTCTCCAAGGCACCATGAATGCCATCGTGGCTCTCTGCCACTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389168.6
CDS CCA 90 bp GGCAGACGAGGCACTGGTCCACCACATCCACAGACAGGTTCTGGTTaGTCAGAGCCGCTTCAATCTTATTCAGGATGGTGGGGCCCACTC +
Preference number: 5 (lower is better)
Translates to: GRRGTGPPHPQTGSG*SEPLQSYSGWWGPL
Trigger: GAGTGGGCCCCACCATCCTGAATAAGATTGAAGCGGCTCTGACCAACCAGAACCTGTCTGTGGATGTGGTGGACCAGTGCCTCGTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CAA 90 bp AGAGCCCATCATCCCTCCGCCTTTCATTGCCATCTTCAGCGATTCCAACGGCTGTCTGCCTCAAACACCTaGAGCGCCTTGCCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: RAHHPSAFHCHLQRFQRLSASNT*SALPWS
Trigger: GCTCCAGGGCAAGGCGCTCAAGGTGTTTGAGGCAGA...CAGCCGTTGGAATCGCTGAAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CAA 90 bp AGGAGTTTGAACACAGAGAGAGCCCATCATCCCTCCGCCTTTCATTGCCATCTTAGCGAGCGGGCGGCGTaGCCGTTCCTCTGGTGTAGG +
Preference number: 5 (lower is better)
Translates to: RSLNTERAHHPSAFHCHLSERAA*PFLWCR
Trigger: CCTACACCAGAGGAACGGCAACGCCGCCCGCTCGCT...AAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCTCTCTGTGTTCAAACTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CAA 90 bp TCGACCAGGCCAAGCACTTGGCTATCACAAAATCGGGACGAGAAGCCTTTAATCAGCGAGCGGGCGGCGTaGCCGTTCCTCTGGTGTAGG +
Preference number: 5 (lower is better)
Translates to: STRPSTWLSQNRDEKPLISERAA*PFLWCR
Trigger: CCTACACCAGAGGAACGGCAACGCCGCCCGCTCGCT...GATTAAAGGCTTCTCGTCCCGATTTTGTGATAGCCAAGTGCTTGGCCTGGTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR CAA 90 bp CCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTAGGCAGGACCACAAACTCGTACTaGCTGAGAGACTGGTCATCC +
Preference number: 5 (lower is better)
Translates to: PSHGAGGSCGQPSLSLGRTTNSY*LRDWSS
Trigger: GGATGACCAGTCTCTCAGCAAGTACGAGTTTGTGGT...CCTGCCTAAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CAA 90 bp GGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTCAGAACTTCAGCAGCTaGACATTGTCCTCCTCGGAC +
Preference number: 5 (lower is better)
Translates to: GQSLSRGWRILWTAIPVFQNFSS*TLSSSD
Trigger: GTCCGAGGAGGACAATGTCAAGCTGCTGAAGTTCTG...AAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS TCA 90 bp GTCTCCACCTCCCCTTCTGGGTGCACTACTTGGCTAAGGCACACGTaGCTGGCTCTGGTCAATGAGCTGAGACAAACAAGGCCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: VSTSPSGCTTWLRHT*LALVNELRQTRPSA
Trigger: TGCTGAGGGCCTTGTTTGTCTCAGCTCATTGACCAGAGCCAGTCACGTGTGCCTTAGCCAAGTAGTGCACCCAGAAGGGGAGGTGGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS GCA 90 bp CCACAGGGAGAGGGTCCTCCACCCAATACATATCTGCTTGGCACCTaGTCCATGTGGGCCAAGGTGCTAGGCAACATGATACTGCCCTCA +
Preference number: 5 (lower is better)
Translates to: PQGEGPPPNTYLLGT*SMWAKVLGNMILPS
Trigger: TGAGGGCAGTATCATGTTGCCTAGCACCTTGGCCCACATGGAGCAGGTGCCAAGCAGATATGTATTGGGTGGAGGACCCTCTCCCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389168.6
CDS CCA 90 bp CTGGGGTGCTGGTGGCTGACGTATTTAATGGAGGTCTCTTTATCATaGCTGATATATCCCGGGTGCCCTGCAGCAAGTGACCGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: LGCWWLTYLMEVSLS*LIYPGCPAASDRQP
Trigger: GGGCTGCCGGTCACTTGCTGCAGGGCACCCGGGATATATCAGCCATGATAAAGAGACCTCCATTAAATACGTCAGCCACCAGCACCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285071.9
ENST00000389168.6
ENST00000389169.9
ENST00000389171.4
ENST00000417064.1
CDS CCA 90 bp TTGAGGCAGACGAGGCACTGGTCCACCACATCCACAGACAGGTTCTaGTTGGTCAGAGCCGCTTCAATCTTATTCAGGATGGTGGGGCCC +
Preference number: 5 (lower is better)
Translates to: LRQTRHWSTTSTDRF*LVRAASILFRMVGP
Trigger: GGGCCCCACCATCCTGAATAAGATTGAAGCGGCTCTGACCAACCAGAACCTGTCTGTGGATGTGGTGGACCAGTGCCTCGTCTGCCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS CCA 90 bp GAGGGCACGCCTGCACCTGCCTGCAGAAACACCTCGAAACAGCTCTaGCTGTTTGGAAGGCTGGTCATTTGCAAGCAGAAGCATGGGAAG +
Preference number: 5 (lower is better)
Translates to: EGTPAPACRNTSKQL*LFGRLVICKQKHGK
Trigger: CTTCCCATGCTTCTGCTTGCAAATGACCAGCCTTCCAAACAGCCAGAGCTGTTTCGAGGTGTTTCTGCAGGCAGGTGCAGGCGTGCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS-3UTR CAA 90 bp AGAGAGCCCATCATCCCTCCGCCTTTCATTGCCATCTTCAGCGATTCCAACGGCAACACCTTGAGCGCCTaGCCCTGGAGCTCATCGATG +
Preference number: 5 (lower is better)
Translates to: REPIIPPPFIAIFSDSNGNTLSA*PWSSSM
Trigger: CATCGATGAGCTCCAGGGCAAGGCGCTCAAGGTGTT...GCCGTTGGAATCGCTGAAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CAA 90 bp GGAGCAAAGACCGTCGACCAGGCCAAGCACTTGGCTATCACAAAATCGGGACGAAACACCTTGAGCGCCTaGCCCTGGAGCTCATCGATG +
Preference number: 5 (lower is better)
Translates to: GAKTVDQAKHLAITKSGRNTLSA*PWSSSM
Trigger: CATCGATGAGCTCCAGGGCAAGGCGCTCAAGGTGTT...TCGTCCCGATTTTGTGATAGCCAAGTGCTTGGCCTGGTCGACGGTCTTTGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR CAA 90 bp TCTCCTGCGGGTTTTGAGTCTAAGTCCACAAGGGGCCTGGGAGGCAAGCTGTCCTTCTGTGTGTCCTCTTaGGGTCGACTGTCCACCTTG +
Preference number: 5 (lower is better)
Translates to: SPAGFESKSTRGLGGKLSFCVSS*GRLSTL
Trigger: CAAGGTGGACAGTCGACCCAAAGAGGACACACAGAA...GGACAGCTTGCCTCCCAGGCCCCTTGTGGACTTAGACTCAAAACCCGCAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CAA 90 bp AGAGCCCATCATCCCTCCGCCTTTCATTGCCATCTTCAGCGATTCCAACGGCTGTTCAGCAGCTTGACATaGTCCTCCTCGGACGCACCC +
Preference number: 5 (lower is better)
Translates to: RAHHPSAFHCHLQRFQRLFSSLT*SSSDAP
Trigger: GGGTGCGTCCGAGGAGGACAATGTCAAGCTGCTGAA...CAGCCGTTGGAATCGCTGAAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CAA 90 bp TCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTAGGCAGGTCTCTCCAAGGAGTTaGAACACAGAGAGAGCCCAT +
Preference number: 5 (lower is better)
Translates to: SLSRGWRILWTAIPVFRQVSPRS*NTERAH
Trigger: ATGGGCTCTCTCTGTGTTCAAACTCCTTGGAGAGAC...CTGCCTAAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS TCA 90 bp CCGTTCCTCTGGTGTAGGAATGGCGTGAAGGCTGTGTTCATCCTCTaGGCACGCTGTGGGCATCCAAACTGCTCTGCCTCAAACACCTTG +
Preference number: 5 (lower is better)
Translates to: PFLWCRNGVKAVFIL*ARCGHPNCSASNTL
Trigger: CAAGGTGTTTGAGGCAGAGCAGTTTGGATGCCCACAGCGTGCTCAGAGGATGAACACAGCCTTCACGCCATTCCTACACCAGAGGAACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285071.9
ENST00000389169.9
ENST00000480316.1
CDS TCA 90 bp CTCTGCCCCGGCTACATCAGGAGCTATCCGAGAACAGAAATCGGTTaGGCTTCTCCTGTCCCCTTCCTAATGAGTGACCCAAGGCACCCA +
Preference number: 5 (lower is better)
Translates to: LCPGYIRSYPRTEIG*ASPVPFLMSDPRHP
Trigger: TGGGTGCCTTGGGTCACTCATTAGGAAGGGGACAGGAGAAGCTCAACCGATTTCTGTTCTCGGATAGCTCCTGATGTAGCCGGGGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS GCA 90 bp ACACCTGAAATGCAAAGGGAAGGGATGGCCTCTTTAAGCCAAAGCTaGCAGCAGCTCGGACCCCTACTCGTTCACAGCCAACTCCAGGAC +
Preference number: 5 (lower is better)
Translates to: TPEMQREGMASLSQS*QQLGPLLVHSQLQD
Trigger: GTCCTGGAGTTGGCTGTGAACGAGTAGGGGTCCGAGCTGCTGGCAGCTTTGGCTTAAAGAGGCCATCCCTTCCCTTTGCATTTCAGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS CCA 90 bp ACCTTCACTTTGTTCATCCACTCCTCCTTGAGGCAGACGAGGCACTaGTCCACCACATCCACAGACAGGTTCTGGTTGGTCAGAGCCGCT +
Preference number: 5 (lower is better)
Translates to: TFTLFIHSSLRQTRH*STTSTDRFWLVRAA
Trigger: AGCGGCTCTGACCAACCAGAACCTGTCTGTGGATGTGGTGGACCAGTGCCTCGTCTGCCTCAAGGAGGAGTGGATGAACAAAGTGAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS CCA 90 bp ACAGCTGGAGCTGTGACAGAGCCACAGCCACAAAGCCAACGGCGCTaGAAAGGAATGTCCTCAAGTGACATGAACTGCAGCCAAACCTGG +
Preference number: 5 (lower is better)
Translates to: TAGAVTEPQPQSQRR*KGMSSSDMNCSQTW
Trigger: CCAGGTTTGGCTGCAGTTCATGTCACTTGAGGACATTCCTTTCCAGCGCCGTTGGCTTTGTGGCTGTGGCTCTGTCACAGCTCCAGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389168.6
CDS CCA 90 bp GCTCGGACCCCTACTCGTTCACAGCCAACTCCAGGACCTGACTCCTaGAGGATCAGTCCCACTATACTCTCTCCATGCAGAGCACACAAA +
Preference number: 5 (lower is better)
Translates to: ARTPTRSQPTPGPDS*RISPTILSPCRAHK
Trigger: TTTGTGTGCTCTGCATGGAGAGAGTATAGTGGGACTGATCCTCCAGGAGTCAGGTCCTGGAGTTGGCTGTGAACGAGTAGGGGTCCGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS-3UTR CAA 90 bp AAGGAGCAAAGACCGTCGACCAGGCCAAGCACTTGGCTATCACAAAATCGGGACGGCATTCATGGTGCCTaGGAGACTGCAACAGGCCTG +
Preference number: 5 (lower is better)
Translates to: KEQRPSTRPSTWLSQNRDGIHGA*ETATGL
Trigger: CAGGCCTGTTGCAGTCTCCAAGGCACCATGAATGCC...GTCCCGATTTTGTGATAGCCAAGTGCTTGGCCTGGTCGACGGTCTTTGCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR CAA 90 bp GCCTTTAATCAGCCAGTTCTCTCTACAGACAGCCCACCTGTGAATTTTCCCCACCACATGTCCGACTTTTaGGGCCCCGGGCTGCTGGAC +
Preference number: 5 (lower is better)
Translates to: AFNQPVLSTDSPPVNFPHHMSDF*GPGLLD
Trigger: GTCCAGCAGCCCGGGGCCCAAAAAGTCGGACATGTG...GTGGGGAAAATTCACAGGTGGGCTGTCTGTAGAGAGAACTGGCTGATTAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR CAA 90 bp TTGAGAAACTCAAGGGACAGTCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGACAGACAGGTTCTGGTaGGTCAGAGCCGCTTCAATC +
Preference number: 5 (lower is better)
Translates to: LRNSRDSPSHGAGGSCGQTDRFW*VRAASI
Trigger: GATTGAAGCGGCTCTGACCAACCAGAACCTGTCTGT...CTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGACTGTCCCTTGAGTTTCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CAA 90 bp CCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTAGGCAGGAAAAGCACCTTCACTTaGTTCATCCACTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: PSHGAGGSCGQPSLSLGRKSTFT*FIHSSL
Trigger: CAAGGAGGAGTGGATGAACAAAGTGAAGGTGCTTTT...CCTGCCTAAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CAA 90 bp TCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTAGGCAGCCTCAGCAACCTGTCTaGTGCAAAAATGATCAGGGA +
Preference number: 5 (lower is better)
Translates to: SLSRGWRILWTAIPVFRQPQQPV*CKNDQG
Trigger: TCCCTGATCATTTTTGCACAAGACAGGTTGCTGAGG...CTGCCTAAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS TCA 90 bp ACTTGTAGGTCTTGCTCAGGCCAGTCATCCAGAACTTCAGCAGCTTaGCATTGTCCTCCTCGGACGCACCCAGGATGCTCAGCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: TCRSCSGQSSRTSAA*HCPPRTHPGCSAAS
Trigger: AGAAGCTGCTGAGCATCCTGGGTGCGTCCGAGGAGGACAATGTCAAGCTGCTGAAGTTCTGGATGACTGGCCTGAGCAAGACCTACAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS TCA 90 bp CACCCCTGTTACGGATCCAAAAGTCAGACGTTCTGTCTTCGCTCCTaGCAGGCAGGCTGTGAACACAAACAAGGCATGGCCTGCCAAAGC +
Preference number: 5 (lower is better)
Translates to: HPCYGSKSQTFCLRS*QAGCEHKQGMACQS
Trigger: GCTTTGGCAGGCCATGCCTTGTTTGTGTTCACAGCCTGCCTGTCAGGAGCGAAGACAGAACGTCTGACTTTTGGATCCGTAACAGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473853.1
CDS TCA 90 bp AATCAGCCAGCGTTAATAACGGGGAGAGTGGCACAGTGGGGGCCATaGGAGCCGAAGACTGTACTCTTCTGCTCCTGTGATCAAGCTTCC +
Preference number: 5 (lower is better)
Translates to: NQPALITGRVAQWGP*EPKTVLFCSCDQAS
Trigger: GGAAGCTTGATCACAGGAGCAGAAGAGTACAGTCTTCGGCTCTCATGGCCCCCACTGTGCCACTCTCCCCGTTATTAACGCTGGCTGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480316.1
CDS GCA 90 bp GGAGGATCAGTCCCACTATACTCTCTCCATGCAGAGCACACAAAGTaGCACCAGTCCAATCATTCCCAACAGCATAGCTCTGCCCCGGCT +
Preference number: 5 (lower is better)
Translates to: GGSVPLYSLHAEHTK*HQSNHSQQHSSAPA
Trigger: AGCCGGGGCAGAGCTATGCTGTTGGGAATGATTGGACTGGTGGCACTTTGTGTGCTCTGCATGGAGAGAGTATAGTGGGACTGATCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS GCA 90 bp CAGGAACCTGGGGAAGCCCAGGCACCTGGGAGGTCAGGGAACCACTaGCCTTCATGGAAAACTTGGGACGAACTGAAACAGAACACTTTA +
Preference number: 5 (lower is better)
Translates to: QEPGEAQAPGRSGNH*PSWKTWDELKQNTL
Trigger: TAAAGTGTTCTGTTTCAGTTCGTCCCAAGTTTTCCATGAAGGGCAGTGGTTCCCTGACCTCCCAGGTGCCTGGGCTTCCCCAGGTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS GCA 90 bp AGACTCCATTGGCAAAGCTTATTTGAGGGCACGCCTGCACCTGCCTaGAGAAACACCTCGAAACAGCTCTGGCTGTTTGGAAGGCTGGTC +
Preference number: 5 (lower is better)
Translates to: RLHWQSLFEGTPAPA*RNTSKQLWLFGRLV
Trigger: GACCAGCCTTCCAAACAGCCAGAGCTGTTTCGAGGTGTTTCTGCAGGCAGGTGCAGGCGTGCCCTCAAATAAGCTTTGCCAATGGAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS CCA 90 bp AGGATCTTCCCATGGGAGTCACAGCAAATAGGGGAGGGGACAATGTaGACCAATGATAGCACAGCTGGAGCTGTGACAGAGCCACAGCCA +
Preference number: 5 (lower is better)
Translates to: RIFPWESQQIGEGTM*TNDSTAGAVTEPQP
Trigger: TGGCTGTGGCTCTGTCACAGCTCCAGCTGTGCTATCATTGGTCCACATTGTCCCCTCCCCTATTTGCTGTGACTCCCATGGGAAGATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389168.6
CDS-3UTR CAA 90 bp AGAGAGCCCATCATCCCTCCGCCTTTCATTGCCATCTTCAGCGATTCCAACGGCTCCCTCCGCCTTTCATaGCCATCTTCAGCGATTCCA +
Preference number: 5 (lower is better)
Translates to: REPIIPPPFIAIFSDSNGSLRLS*PSSAIP
Trigger: TGGAATCGCTGAAGATGGCAATGAAAGGCGGAGGGA...GCCGTTGGAATCGCTGAAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CAA 90 bp AGAGCCCATCATCCCTCCGCCTTTCATTGCCATCTTCAGCGATTCCAACGGCTGACCATATCCAGGGGATaGGGCAAGTCAGATGCTTGC +
Preference number: 5 (lower is better)
Translates to: RAHHPSAFHCHLQRFQRLTISRG*GKSDAC
Trigger: GCAAGCATCTGACTTGCCCAATCCCCTGGATATGGT...CAGCCGTTGGAATCGCTGAAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CAA 90 bp GGAGCAAAGACCGTCGACCAGGCCAAGCACTTGGCTATCACAAAATCGGGACGAGACCAGGCCAAGCACTaGGCTATCACAAAATCGGGA +
Preference number: 5 (lower is better)
Translates to: GAKTVDQAKHLAITKSGRDQAKH*AITKSG
Trigger: TCCCGATTTTGTGATAGCCAAGTGCTTGGCCTGGTC...TCGTCCCGATTTTGTGATAGCCAAGTGCTTGGCCTGGTCGACGGTCTTTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS TCA 90 bp CAATGGTCGTACCACAGACCTGTAGCACCAAGATCAAATCATCCCTaGTGGAAAGCTTGGCCAAGACTGGCCCAGTGCTTCCAGGCTGGT +
Preference number: 5 (lower is better)
Translates to: QWSYHRPVAPRSNHP*WKAWPRLAQCFQAG
Trigger: ACCAGCCTGGAAGCACTGGGCCAGTCTTGGCCAAGCTTTCCATCAGGGATGATTTGATCTTGGTGCTACAGGTCTGTGGTACGACCATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS TCA 90 bp ACAGTGGGGGCCATGAGAGCCGAAGACTGTACTCTTCTGCTCCTGTaGTCAAGCTTCCAACAACACTTGTCATTGTGGACTGCAAGGGCC +
Preference number: 5 (lower is better)
Translates to: TVGAMRAEDCTLLLL*SSFQQHLSLWTARA
Trigger: GGCCCTTGCAGTCCACAATGACAAGTGTTGTTGGAAGCTTGATCACAGGAGCAGAAGAGTACAGTCTTCGGCTCTCATGGCCCCCACTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480316.1
CDS GCA 90 bp CCAGGACCTGACTCCTGGAGGATCAGTCCCACTATACTCTCTCCATaGAGAGCACACAAAGTGCCACCAGTCCAATCATTCCCAACAGCA +
Preference number: 5 (lower is better)
Translates to: PGPDSWRISPTILSP*RAHKVPPVQSFPTA
Trigger: TGCTGTTGGGAATGATTGGACTGGTGGCACTTTGTGTGCTCTGCATGGAGAGAGTATAGTGGGACTGATCCTCCAGGAGTCAGGTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS CCA 90 bp GCCTGGCGGACAATGCTGAAGAGCTGGGGGTGGCTGGGGTGCTGGTaGCTGACGTATTTAATGGAGGTCTCTTTATCATGGCTGATATAT +
Preference number: 5 (lower is better)
Translates to: AWRTMLKSWGWLGCW*LTYLMEVSLSWLIY
Trigger: ATATATCAGCCATGATAAAGAGACCTCCATTAAATACGTCAGCCACCAGCACCCCAGCCACCCCCAGCTCTTCAGCATTGTCCGCCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000285071.9
ENST00000389168.6
ENST00000389169.9
ENST00000389171.4
ENST00000417064.1
CDS CCA 90 bp TCTGTCTTCGCTCCTGACAGGCAGGCTGTGAACACAAACAAGGCATaGCCTGCCAAAGCCGCTAACTCTAGGAAGAAGCAAAGGACGATG +
Preference number: 5 (lower is better)
Translates to: SVFAPDRQAVNTNKA*PAKAANSRKKQRTM
Trigger: CATCGTCCTTTGCTTCTTCCTAGAGTTAGCGGCTTTGGCAGGCCATGCCTTGTTTGTGTTCACAGCCTGCCTGTCAGGAGCGAAGACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473853.1
CDS-3UTR CAA 90 bp CCAAGCACTTGGCTATCACAAAATCGGGACGAGAAGCCTTTAATCAGCCAGTTCTCTGCCTCAAACACCTaGAGCGCCTTGCCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: PSTWLSQNRDEKPLISQFSASNT*SALPWS
Trigger: GCTCCAGGGCAAGGCGCTCAAGGTGTTTGAGGCAGA...GAACTGGCTGATTAAAGGCTTCTCGTCCCGATTTTGTGATAGCCAAGTGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR CAA 90 bp CACCTAGCTGGGGAACAGATTCTTTCACATGGCGGTCAAGGCAAACGAGACAGGACAGGTTGTCATCACTaGTCAGCGATGTCAGCGAGC +
Preference number: 5 (lower is better)
Translates to: HLAGEQILSHGGQGKRDRTGCHH*SAMSAS
Trigger: GCTCGCTGACATCGCTGACAAGTGATGACAACCTGT...CCTGTCTCGTTTGCCTTGACCGCCATGTGAAAGAATCTGTTCCCCAGCTAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR CAA 90 bp TTGCCGACCCCTCAGCAACCTGTCTTGTGCAAAAATGATCAGGGACTCCATCATTTCATCCACTCCTCCTaGAGGCAGACGAGGCACTGG +
Preference number: 5 (lower is better)
Translates to: LPTPQQPVLCKNDQGLHHFIHSS*RQTRHW
Trigger: CCAGTGCCTCGTCTGCCTCAAGGAGGAGTGGATGAA...ATGATGGAGTCCCTGATCATTTTTGCACAAGACAGGTTGCTGAGGGGTCGGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CAA 90 bp AGAGAGCCCATCATCCCTCCGCCTTTCATTGCCATCTTCAGCGATTCCAACGGCGGTCGACTGTCCACCTaGGTGAACTTAAAAAGCACC +
Preference number: 5 (lower is better)
Translates to: REPIIPPPFIAIFSDSNGGRLST*VNLKST
Trigger: GGTGCTTTTTAAGTTCACCAAGGTGGACAGTCGACC...GCCGTTGGAATCGCTGAAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CAA 90 bp AGAGCCCATCATCCCTCCGCCTTTCATTGCCATCTTCAGCGATTCCAACGGCTGTTTCTCCTGCGGGTTTaGAGTCTAAGTCCACAAGGG +
Preference number: 5 (lower is better)
Translates to: RAHHPSAFHCHLQRFQRLFLLRV*SLSPQG
Trigger: CCCTTGTGGACTTAGACTCAAAACCCGCAGGAGAAA...CAGCCGTTGGAATCGCTGAAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CAA 90 bp AGAGCCCATCATCCCTCCGCCTTTCATTGCCATCTTCAGCGATTCCAACGGCTGGGAGCAGACATGTTATaGCGACTGCATACTGAGTCG +
Preference number: 5 (lower is better)
Translates to: RAHHPSAFHCHLQRFQRLGADML*RLHTES
Trigger: CGACTCAGTATGCAGTCGCAATAACATGTCTGCTCC...CAGCCGTTGGAATCGCTGAAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS TCA 90 bp GCCACAGCCACAAAGCCAACGGCGCTGGAAAGGAATGTCCTCAAGTaGCATGAACTGCAGCCAAACCTGGCAAACCCTGTGAGAACAAAT +
Preference number: 5 (lower is better)
Translates to: ATATKPTALERNVLK*HELQPNLANPVRTN
Trigger: ATTTGTTCTCACAGGGTTTGCCAGGTTTGGCTGCAGTTCATGTCACTTGAGGACATTCCTTTCCAGCGCCGTTGGCTTTGTGGCTGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389168.6
CDS TCA 90 bp GTGGATTCCCAGGCTTTGTCTTTCCTGACCAGGTTTTGCTCTTGCTaGGACTCCATTGGCAAAGCTTATTTGAGGGCACGCCTGCACCTG +
Preference number: 5 (lower is better)
Translates to: VDSQALSFLTRFCSC*DSIGKAYLRARLHL
Trigger: CAGGTGCAGGCGTGCCCTCAAATAAGCTTTGCCAATGGAGTCTCAGCAAGAGCAAAACCTGGTCAGGAAAGACAAAGCCTGGGAATCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS TCA 90 bp CCAACCTGCAGGGCATGGGGGTGGATTCCCAGGCTTTGTCTTTCCTaGCCAGGTTTTGCTCTTGCTGAGACTCCATTGGCAAAGCTTATT +
Preference number: 5 (lower is better)
Translates to: PTCRAWGWIPRLCLS*PGFALAETPLAKLI
Trigger: AATAAGCTTTGCCAATGGAGTCTCAGCAAGAGCAAAACCTGGTCAGGAAAGACAAAGCCTGGGAATCCACCCCCATGCCCTGCAGGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS GCA 90 bp ACGTATTTAATGGAGGTCTCTTTATCATGGCTGATATATCCCGGGTaGCCTGCAGCAAGTGACCGGCAGCCCTCGCACATGTCCGACTTT +
Preference number: 5 (lower is better)
Translates to: TYLMEVSLSWLIYPG*PAASDRQPSHMSDF
Trigger: AAAGTCGGACATGTGCGAGGGCTGCCGGTCACTTGCTGCAGGGCACCCGGGATATATCAGCCATGATAAAGAGACCTCCATTAAATACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285071.9
ENST00000389168.6
ENST00000389169.9
ENST00000389171.4
ENST00000417064.1
CDS CCA 90 bp GGCTTTGTCTTTCCTGACCAGGTTTTGCTCTTGCTGAGACTCCATTaGCAAAGCTTATTTGAGGGCACGCCTGCACCTGCCTGCAGAAAC +
Preference number: 5 (lower is better)
Translates to: GFVFPDQVLLLLRLH*QSLFEGTPAPACRN
Trigger: GTTTCTGCAGGCAGGTGCAGGCGTGCCCTCAAATAAGCTTTGCCAATGGAGTCTCAGCAAGAGCAAAACCTGGTCAGGAAAGACAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS CCA 90 bp ATATGTCACACCTCTCCCAGACTCAAATGTACCAGCTTACTCACCTaGAGCATGCAGAAGAACCAGCAGGTCAGAGCAGCCACTGCACTC +
Preference number: 5 (lower is better)
Translates to: ICHTSPRLKCTSLLT*SMQKNQQVRAATAL
Trigger: GAGTGCAGTGGCTGCTCTGACCTGCTGGTTCTTCTGCATGCTCCAGGTGAGTAAGCTGGTACATTTGAGTCTGGGAGAGGTGTGACATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480316.1
CDS-3UTR CAA 90 bp TTGCCGACCCCTCAGCAACCTGTCTTGTGCAAAAATGATCAGGGACTCCATCATAGGCACGCCCACAGGTaGTCATCACTTGTCAGCGAT +
Preference number: 5 (lower is better)
Translates to: LPTPQQPVLCKNDQGLHHRHAHR*SSLVSD
Trigger: ATCGCTGACAAGTGATGACAACCTGTGGGCGTGCCT...ATGATGGAGTCCCTGATCATTTTTGCACAAGACAGGTTGCTGAGGGGTCGGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CAA 90 bp CTGGGGAACAGATTCTTTCACATGGCGGTCAAGGCAAACGAGACAGGAAATCACAGGCACGCCCACAGGTaGTCATCACTTGTCAGCGAT +
Preference number: 5 (lower is better)
Translates to: LGNRFFHMAVKANETGNHRHAHR*SSLVSD
Trigger: ATCGCTGACAAGTGATGACAACCTGTGGGCGTGCCT...GTGATTTCCTGTCTCGTTTGCCTTGACCGCCATGTGAAAGAATCTGTTCCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR CAA 90 bp TCCCTCTCACGGGGCTGGAGGATCCTGTGGACAGCCATCCCTGTCTTTAGGCAGAAGGCCCAGAAACTCTaGCTGAATTTCAAAGTAGAA +
Preference number: 5 (lower is better)
Translates to: SLSRGWRILWTAIPVFRQKAQKL*LNFKVE
Trigger: TTCTACTTTGAAATTCAGCAAGAGTTTCTGGGCCTT...CTGCCTAAAGACAGGGATGGCTGTCCACAGGATCCTCCAGCCCCGTGAGAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CAA 90 bp TCTCCTGCGGGTTTTGAGTCTAAGTCCACAAGGGGCCTGGGAGGCAAGCTGTCCAGTGGGATGATGAAATaGTCTTCAATCACCACACTC +
Preference number: 5 (lower is better)
Translates to: SPAGFESKSTRGLGGKLSSGMMK*SSITTL
Trigger: GAGTGTGGTGATTGAAGACAATTTCATCATCCCACT...GGACAGCTTGCCTCCCAGGCCCCTTGTGGACTTAGACTCAAAACCCGCAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS TCA 90 bp ATGTCCTCAAGTGACATGAACTGCAGCCAAACCTGGCAAACCCTGTaGGAACAAATAGATAAAAGGCCACAGGGAGAGGGTCCTCCACCC +
Preference number: 5 (lower is better)
Translates to: MSSSDMNCSQTWQTL*EQIDKRPQGEGPPP
Trigger: GGGTGGAGGACCCTCTCCCTGTGGCCTTTTATCTATTTGTTCTCACAGGGTTTGCCAGGTTTGGCTGCAGTTCATGTCACTTGAGGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389168.6
CDS TCA 90 bp GAAATTAAAAGGAGAGGACAGTTGAGGGCAGGCACACAGCCACACTaGATGAGAACAGTAAGGGAGCTTGGTGTGTCGAACTGGGTGGAC +
Preference number: 5 (lower is better)
Translates to: EIKRRGQLRAGTQPH*MRTVRELGVSNWVD
Trigger: GTCCACCCAGTTCGACACACCAAGCTCCCTTACTGTTCTCATTCAGTGTGGCTGTGTGCCTGCCCTCAACTGTCCTCTCCTTTTAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389168.6
ENST00000389171.4
CDS CCA 90 bp GCCTGCACCTGCCTGCAGAAACACCTCGAAACAGCTCTGGCTGTTTaGAAGGCTGGTCATTTGCAAGCAGAAGCATGGGAAGCATTATTA +
Preference number: 5 (lower is better)
Translates to: ACTCLQKHLETALAV*KAGHLQAEAWEALL
Trigger: TAATAATGCTTCCCATGCTTCTGCTTGCAAATGACCAGCCTTCCAAACAGCCAGAGCTGTTTCGAGGTGTTTCTGCAGGCAGGTGCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS-3UTR CAA 90 bp TCACAAAATCGGGACGAGAAGCCTTTAATCAGCCAGTTCTCTCTACAGACAGCCTGGTGGCAGACACCCTaGAAGACCTGGCGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: SQNRDEKPLISQFSLQTAWWQTP*KTWRFL
Trigger: CAGAAAACGCCAGGTCTTCAAGGGTGTCTGCCACCA...GGCTGTCTGTAGAGAGAACTGGCTGATTAAAGGCTTCTCGTCCCGATTTTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389169.9
CDS-3UTR CAA 90 bp AGGAGTTTGAACACAGAGAGAGCCCATCATCCCTCCGCCTTTCATTGCCATCTTACAGGTTGTCATCACTaGTCAGCGATGTCAGCGAGC +
Preference number: 5 (lower is better)
Translates to: RSLNTERAHHPSAFHCHLTGCHH*SAMSAS
Trigger: GCTCGCTGACATCGCTGACAAGTGATGACAACCTGT...AAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCTCTCTGTGTTCAAACTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CAA 90 bp TTGCCGACCCCTCAGCAACCTGTCTTGTGCAAAAATGATCAGGGACTCCATCATACTCCCCAAAGTCTCTaGCGGAGCCCTAACTCAATC +
Preference number: 5 (lower is better)
Translates to: LPTPQQPVLCKNDQGLHHTPQSL*RSPNSI
Trigger: GATTGAGTTAGGGCTCCGCAAGAGACTTTGGGGAGT...ATGATGGAGTCCCTGATCATTTTTGCACAAGACAGGTTGCTGAGGGGTCGGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CAA 90 bp AGGAGTTTGAACACAGAGAGAGCCCATCATCCCTCCGCCTTTCATTGCCATCTTTCTTCAGCCTCAGAGTaGTCCCAGCTTTCTGATTCC +
Preference number: 5 (lower is better)
Translates to: RSLNTERAHHPSAFHCHLSSASE*SQLSDS
Trigger: GGAATCAGAAAGCTGGGACAACTCTGAGGCTGAAGA...AAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCTCTCTGTGTTCAAACTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS-3UTR CAA 90 bp AGGAGTTTGAACACAGAGAGAGCCCATCATCCCTCCGCCTTTCATTGCCATCTTACCTGTAGCTGTATGTaGAAGCAGGAGGACTGCTTG +
Preference number: 5 (lower is better)
Translates to: RSLNTERAHHPSAFHCHLTCSCM*KQEDCL
Trigger: CAAGCAGTCCTCCTGCTTCAACATACAGCTACAGGT...AAGATGGCAATGAAAGGCGGAGGGATGATGGGCTCTCTCTGTGTTCAAACTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS GCA 90 bp CTTCGACAGACCTGGCTCTTCGTGCTAAAAAGCTCACCAAGACACTaGCCTTGCCATCTGCACCTGCCTAGAAACATGATTAGCACTATA +
Preference number: 5 (lower is better)
Translates to: LRQTWLFVLKSSPRH*PCHLHLPRNMISTI
Trigger: TATAGTGCTAATCATGTTTCTAGGCAGGTGCAGATGGCAAGGGCAGTGTCTTGGTGAGCTTTTTAGCACGAAGAGCCAGGTCTGTCGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS CCA 90 bp GTGACACCAAATCAAAGCCTCTTCTTCAGACTTTTCAGAGTCAGCTaGCACAAATCAGCCAGCGTTAATAACGGGGAGAGTGGCACAGTG +
Preference number: 5 (lower is better)
Translates to: VTPNQSLFFRLFRVS*HKSASVNNGESGTV
Trigger: CACTGTGCCACTCTCCCCGTTATTAACGCTGGCTGATTTGTGCCAGCTGACTCTGAAAAGTCTGAAGAAGAGGCTTTGATTTGGTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480316.1
CDS CCA 90 bp CTGCCTGCAGAAACACCTCGAAACAGCTCTGGCTGTTTGGAAGGCTaGTCATTTGCAAGCAGAAGCATGGGAAGCATTATTAATGACATG +
Preference number: 5 (lower is better)
Translates to: LPAETPRNSSGCLEG*SFASRSMGSIINDM
Trigger: CATGTCATTAATAATGCTTCCCATGCTTCTGCTTGCAAATGACCAGCCTTCCAAACAGCCAGAGCTGTTTCGAGGTGTTTCTGCAGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS-3UTR CAA 90 bp CTCAAACATAAGGCCCAGAAACTCTTGCTGAATTTCAAAGTAGAAACGCTTGAACTCATTCCCATCCCCTaGAGGAAGTGGGGCGTGCAG +
Preference number: 5 (lower is better)
Translates to: LKHKAQKLLLNFKVETLELIPIP*RKWGVQ
Trigger: CTGCACGCCCCACTTCCTCAAGGGGATGGGAATGAG...TTCAAGCGTTTCTACTTTGAAATTCAGCAAGAGTTTCTGGGCCTTATGTTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS CCA 90 bp ACAGCTCTGGCTGTTTGGAAGGCTGGTCATTTGCAAGCAGAAGCATaGGAAGCATTATTAATGACATGTGGTGTGGAACAATGGTCGTAC +
Preference number: 5 (lower is better)
Translates to: TALAVWKAGHLQAEA*EALLMTCGVEQWSY
Trigger: GTACGACCATTGTTCCACACCACATGTCATTAATAATGCTTCCCATGCTTCTGCTTGCAAATGACCAGCCTTCCAAACAGCCAGAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS GCA 90 bp CAGACCTGGCTCTTCGTGCTAAAAAGCTCACCAAGACACTGCCCTTaGCATCTGCACCTGCCTAGAAACATGATTAGCACTATAATAAAT +
Preference number: 5 (lower is better)
Translates to: QTWLFVLKSSPRHCP*HLHLPRNMISTIIN
Trigger: ATTTATTATAGTGCTAATCATGTTTCTAGGCAGGTGCAGATGGCAAGGGCAGTGTCTTGGTGAGCTTTTTAGCACGAAGAGCCAGGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS CCA 90 bp TGGTCATTTGCAAGCAGAAGCATGGGAAGCATTATTAATGACATGTaGTGTGGAACAATGGTCGTACCACAGACCTGTAGCACCAAGATC +
Preference number: 5 (lower is better)
Translates to: WSFASRSMGSIINDM*CGTMVVPQTCSTKI
Trigger: GATCTTGGTGCTACAGGTCTGTGGTACGACCATTGTTCCACACCACATGTCATTAATAATGCTTCCCATGCTTCTGCTTGCAAATGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS-3UTR CAA 90 bp CTCAAACATAAGGCCCAGAAACTCTTGCTGAATTTCAAAGTAGAAACGCTTGAATGGTGGCAGACACCCTaGAAGACCTGGCGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: LKHKAQKLLLNFKVETLEWWQTP*KTWRFL
Trigger: CAGAAAACGCCAGGTCTTCAAGGGTGTCTGCCACCA...TTCAAGCGTTTCTACTTTGAAATTCAGCAAGAGTTTCTGGGCCTTATGTTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS TCA 90 bp GAGAACAGTAAGGGAGCTTGGTGTGTCGAACTGGGTGGACACCAATaGCAAGGAAGTTTAGTAACTGAACGACGAATTCTTTGTAACAAA +
Preference number: 5 (lower is better)
Translates to: ENSKGAWCVELGGHQ*QGSLVTERRILCNK
Trigger: TTTGTTACAAAGAATTCGTCGTTCAGTTACTAAACTTCCTTGTCATTGGTGTCCACCCAGTTCGACACACCAAGCTCCCTTACTGTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389168.6
ENST00000389171.4
CDS TCA 90 bp ATTAGTATTTGTCATTTCAACGAAACTTCATGGAGCCCTCACAAATaGCAACATCTCCATTTCACATCACGAGACCCAAAGGGAAGGGTG +
Preference number: 5 (lower is better)
Translates to: ISICHFNETSWSPHK*QHLHFTSRDPKGRV
Trigger: CACCCTTCCCTTTGGGTCTCGTGATGTGAAATGGAGATGTTGTCATTTGTGAGGGCTCCATGAAGTTTCGTTGAAATGACAAATACTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS CCA 72 bp TGGGTCCCAGCCCCGCCCCTGACTGCGCTGGGTAGGTaGTCGCTGCGGGACCCGGACCGGCGGAATCACACC +
Preference number: 6 (lower is better)
Translates to: WVPAPPLTALGR*SLRDPDRRNHT
Trigger: GGTGTGATTCCGCCGGTCCGGGTCCCGCAGCGACCACCTACCCAGCGCAGTCAGGGGCGGGGCTGGGACCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285071.9
ENST00000389169.9
ENST00000389171.4
ENST00000417064.1
CDS CCA 72 bp TCCGCCTGCTCCCCAAATCGAGGCCCGCGGGACACCTaGACTCGGCAGCCGGGGTCCCGCTCTGGGTCCCAG +
Preference number: 6 (lower is better)
Translates to: SACSPNRGPRDT*TRQPGSRSGSQ
Trigger: CTGGGACCCAGAGCGGGACCCCGGCTGCCGAGTCCAGGTGTCCCGCGGGCCTCGATTTGGGGAGCAGGCGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417064.1
CDS CAA 72 bp GCAAGTGACCGGCAGCCCTCGCACATGTCCGACTTTTaGGGCCCCGGGCTGCTGGACTCGACGCTGGCCCCC +
Preference number: 6 (lower is better)
Translates to: ASDRQPSHMSDF*GPGLLDSTLAP
Trigger: GGGGGCCAGCGTCGAGTCCAGCAGCCCGGGGCCCAAAAAGTCGGACATGTGCGAGGGCTGCCGGTCACTTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285071.9
ENST00000389168.6
ENST00000389169.9
ENST00000389171.4
ENST00000417064.1
CDS GCA 72 bp CGGCCATCCGGGCCAAGGCCCCGGCAACAGCACCCCTaGCTCACCAGCGAGCTTCTCCATCTGGACCAAGGT +
Preference number: 6 (lower is better)
Translates to: RPSGPRPRQQHP*LTSELLHLDQG
Trigger: ACCTTGGTCCAGATGGAGAAGCTCGCTGGTGAGGCAGGGGTGCTGTTGCCGGGGCCTTGGCCCGGATGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389169.9
ENST00000466317.1
CDS CCA 72 bp GGGCAGACCTCACAGCTCAGGCTCCGGACACAGGCCTaGCGGACAATGCTGAAGAGCTGGGGGTGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: GQTSQLRLRTQA*RTMLKSWGWLG
Trigger: CCCCAGCCACCCCCAGCTCTTCAGCATTGTCCGCCAGGCCTGTGTCCGGAGCCTGAGCTGTGAGGTCTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000285071.9
ENST00000389169.9
ENST00000417064.1
CDS TCA 72 bp GCAGTGAGCAGGGGAGAAGGCCCAGTGAGTGCCTGCTaGGCCTTCACGGGGACGGGACACAGCAGCAGAGCC +
Preference number: 6 (lower is better)
Translates to: AVSRGEGPVSAC*AFTGTGHSSRA
Trigger: GGCTCTGCTGCTGTGTCCCGTCCCCGTGAAGGCTCAGCAGGCACTCACTGGGCCTTCTCCCCTGCTCACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389168.6
CDS GCA 72 bp GTGCGGAGCAGTGAGCAGGGGAGAAGGCCCAGTGAGTaGCTGCTGAGCCTTCACGGGGACGGGACACAGCAG +
Preference number: 6 (lower is better)
Translates to: VRSSEQGRRPSE*LLSLHGDGTQQ
Trigger: CTGCTGTGTCCCGTCCCCGTGAAGGCTCAGCAGGCACTCACTGGGCCTTCTCCCCTGCTCACTGCTCCGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389168.6
CDS CCA 72 bp AGGCTCACCTCACAGCTCAGGCTCCGGACACAGGCCTaGCGGACAATGCTGAAGAGCTGGGGGTGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: RLTSQLRLRTQA*RTMLKSWGWLG
Trigger: CCCCAGCCACCCCCAGCTCTTCAGCATTGTCCGCCAGGCCTGTGTCCGGAGCCTGAGCTGTGAGGTGAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389168.6
ENST00000389171.4
CDS GCA 72 bp CAGCCAGCCTCTCTGCCGGCGGCCCATGCCTGGAACTaGTTCTTCAGCATGCCTGCGAATGCACCACCCACC +
Preference number: 6 (lower is better)
Translates to: QPASLPAAHAWN*FFSMPANAPPT
Trigger: GGTGGGTGGTGCATTCGCAGGCATGCTGAAGAAGCAGTTCCAGGCATGGGCCGCCGGCAGAGAGGCTGGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473853.1
CDS CCA 72 bp AGGCTCTCAAGCCCGGGTTCAGGCTCTCAGGGGAGCTaGCAGAACCAGGAGCGACCACACTCACTCGCGGTC +
Preference number: 6 (lower is better)
Translates to: RLSSPGSGSQGS*QNQERPHSLAV
Trigger: GACCGCGAGTGAGTGTGGTCGCTCCTGGTTCTGCCAGCTCCCCTGAGAGCCTGAACCCGGGCTTGAGAGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285071.9
ENST00000389171.4
ENST00000417064.1
CDS CCA 72 bp CCACAGCCTGAGAGAGAGGAGGACTCTGCCGGGCCCTaGGTCAGCTCCCGCCCTTCTGTACTCTCTGGCAAC +
Preference number: 6 (lower is better)
Translates to: PQPEREEDSAGP*VSSRPSVLSGN
Trigger: GTTGCCAGAGAGTACAGAAGGGCGGGAGCTGACCCAGGGCCCGGCAGAGTCCTCCTCTCTCTCAGGCTGTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS CAA 90 bp GCCTTCAGGAGCCAGGCAAAGGAGGTGTGCAGGCACGCCCACAGGTaGTCATCACTTGTCAGCGATGTCAGCGAGCGGGCGGCGTTGCCG +
Preference number: 6 (lower is better)
Translates to: AFRSQAKEVCRHAHR*SSLVSDVSERAALP
Trigger: CGGCAACGCCGCCCGCTCGCTGACATCGCTGACAAGTGATGACAACCTGTGGGCGTGCCTGCACACCTCCTTTGCCTGGCTCCTGAAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285071.9
ENST00000389169.9
ENST00000466317.1
ENST00000480316.1
CDS CCA 72 bp CGGGCCCTGGGTCAGCTCCCGCCCTTCTGTACTCTCTaGCAACACAGGGGCTTTCTCCTCCTCTTCAGCCTC +
Preference number: 6 (lower is better)
Translates to: RALGQLPPFCTL*QHRGFLLLFSL
Trigger: GAGGCTGAAGAGGAGGAGAAAGCCCCTGTGTTGCCAGAGAGTACAGAAGGGCGGGAGCTGACCCAGGGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS CCA 72 bp CACCCCACAGGGTGGAGGGTGGAACGTGCGGCTGCGTaGACCTCCACGATGACAGCAAACTCTGAGGAGAGC +
Preference number: 6 (lower is better)
Translates to: HPTGWRVERAAA*TSTMTANSEES
Trigger: GCTCTCCTCAGAGTTTGCTGTCATCGTGGAGGTCCACGCAGCCGCACGTTCCACCCTCCACCCTGTGGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS CCA 72 bp CCGAGATCGGAGGGTGAGCTTCCCGAAGGCTCGTTCTaGGCTGATTCAGAGCCGCGTTTCCCTCCCTCAGCG +
Preference number: 6 (lower is better)
Translates to: PRSEGELPEGSF*ADSEPRFPPSA
Trigger: CGCTGAGGGAGGGAAACGCGGCTCTGAATCAGCCCAGAACGAGCCTTCGGGAAGCTCACCCTCCGATCTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389169.9
ENST00000466317.1
CDS CAA 72 bp AGGAGGTGTGCAGGCACGCCCACAGGTTGTCATCACTaGTCAGCGATGTCAGCGAGCGGGCGGCGTTGCCGT +
Preference number: 6 (lower is better)
Translates to: RRCAGTPTGCHH*SAMSASGRRCR
Trigger: ACGGCAACGCCGCCCGCTCGCTGACATCGCTGACAAGTGATGACAACCTGTGGGCGTGCCTGCACACCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285071.9
ENST00000389169.9
ENST00000466317.1
ENST00000480316.1
CDS CAA 90 bp GCCAGGCAAAGGAGGTGTGCAGGCACGCCCACAGGTTGTCATCACTaGTCAGCGATGTCAGCGAGCGGGCGGCGTTGCCGTTCCTCTGGT +
Preference number: 6 (lower is better)
Translates to: ARQRRCAGTPTGCHH*SAMSASGRRCRSSG
Trigger: ACCAGAGGAACGGCAACGCCGCCCGCTCGCTGACATCGCTGACAAGTGATGACAACCTGTGGGCGTGCCTGCACACCTCCTTTGCCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285071.9
ENST00000389169.9
ENST00000466317.1
ENST00000480316.1
CDS TCA 72 bp TCACCCTGGCCAGGACTGTCCTCATTCCCATCCCCTTaGGGAAGTGGGGCGTGCAGCACCTCCGTGCAGAAG +
Preference number: 6 (lower is better)
Translates to: SPWPGLSSFPSP*GSGACSTSVQK
Trigger: CTTCTGCACGGAGGTGCTGCACGCCCCACTTCCTCAAGGGGATGGGAATGAGGACAGTCCTGGCCAGGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285071.9
ENST00000389168.6
ENST00000389169.9
ENST00000389171.4
CDS TCA 72 bp GGGCGGCGTTGCCGTTCCTCTGGTGTAGGAATGGCGTaGAGGCTGTGTTCATCCTCTGAGCACGCTGTGGGC +
Preference number: 6 (lower is better)
Translates to: GRRCRSSGVGMA*RLCSSSEHAVG
Trigger: GCCCACAGCGTGCTCAGAGGATGAACACAGCCTTCACGCCATTCCTACACCAGAGGAACGGCAACGCCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285071.9
ENST00000389169.9
ENST00000466317.1
ENST00000480316.1
CDS GCA 72 bp TGGGCCAAGGTGCTAGGCAACATGATACTGCCCTCATaGAGCTTACCTCCTGCAGGGGGTCGGCGGGGGACA +
Preference number: 6 (lower is better)
Translates to: WAKVLGNMILPS*SLPPAGGRRGT
Trigger: TGTCCCCCGCCGACCCCCTGCAGGAGGTAAGCTGCATGAGGGCAGTATCATGTTGCCTAGCACCTTGGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389168.6
CDS GCA 72 bp CCGCAATTCTGGACAAGGGAGGCGTCCTGTACCCTGTaGTGTGCTGATCTGCGGGTCCGCCCTGAGAGAGGA +
Preference number: 6 (lower is better)
Translates to: PQFWTREASCTL*CADLRVRPERG
Trigger: TCCTCTCTCAGGGCGGACCCGCAGATCAGCACAGCACAGGGTACAGGACGCCTCCCTTGTCCAGAATTGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389168.6
ENST00000389171.4
CDS GCA 72 bp CCCCACCTGACGCCAGGCACCAGGCCAATACTGCCCTaGGCCGCACACCTAAGGAAAAGATGTTCTCACCCG +
Preference number: 6 (lower is better)
Translates to: PHLTPGTRPILP*AAHLRKRCSHP
Trigger: CGGGTGAGAACATCTTTTCCTTAGGTGTGCGGCGCAGGGCAGTATTGGCCTGGTGCCTGGCGTCAGGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577591.1
CDS CCA 72 bp GCCAGGACTGTCCTCATTCCCATCCCCTTGAGGAAGTaGGGCGTGCAGCACCTCCGTGCAGAAGAGAGTGCG +
Preference number: 6 (lower is better)
Translates to: ARTVLIPIPLRK*GVQHLRAEESA
Trigger: CGCACTCTCTTCTGCACGGAGGTGCTGCACGCCCCACTTCCTCAAGGGGATGGGAATGAGGACAGTCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285071.9
ENST00000389168.6
ENST00000389169.9
ENST00000389171.4
CDS CCA 72 bp AAGTGGCAGAGAGCCACGATGGCATTCATGGTGCCTTaGAGACTGCAACAGGCCTCCTGCAGGGGGTCGGCG +
Preference number: 6 (lower is better)
Translates to: KWQRATMAFMVP*RLQQASCRGSA
Trigger: CGCCGACCCCCTGCAGGAGGCCTGTTGCAGTCTCCAAGGCACCATGAATGCCATCGTGGCTCTCTGCCACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461699.1
CDS CAA 72 bp CTCACCCTGGCCAGGACTGTCCTCATTCCCATCCCCTaGAGGAAGTGGGGCGTGCAGCACCTCCGTGCAGAA +
Preference number: 6 (lower is better)
Translates to: LTLARTVLIPIP*RKWGVQHLRAE
Trigger: TTCTGCACGGAGGTGCTGCACGCCCCACTTCCTCAAGGGGATGGGAATGAGGACAGTCCTGGCCAGGGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285071.9
ENST00000389168.6
ENST00000389169.9
ENST00000389171.4
CDS CAA 72 bp AGCCAGGCAAAGGAGGTGTGCAGGCACGCCCACAGGTaGTCATCACTTGTCAGCGATGTCAGCGAGCGGGCG +
Preference number: 6 (lower is better)
Translates to: SQAKEVCRHAHR*SSLVSDVSERA
Trigger: CGCCCGCTCGCTGACATCGCTGACAAGTGATGACAACCTGTGGGCGTGCCTGCACACCTCCTTTGCCTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285071.9
ENST00000389169.9
ENST00000466317.1
ENST00000480316.1
CDS CAA 72 bp GAAGTGGCAGAGAGCCACGATGGCATTCATGGTGCCTaGGAGACTGCAACAGGCCTCCTGCAGGGGGTCGGC +
Preference number: 6 (lower is better)
Translates to: EVAESHDGIHGA*ETATGLLQGVG
Trigger: GCCGACCCCCTGCAGGAGGCCTGTTGCAGTCTCCAAGGCACCATGAATGCCATCGTGGCTCTCTGCCACTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461699.1
CDS CAA 90 bp GGAGGCAGGAGCCTGGAAGGACTGGCTTACGGGGCCAAGCAAGAGTaGAAGGGCAGGGTGGGTGCTGTACTGTCTGAGGGGTGTGTAAGG +
Preference number: 6 (lower is better)
Translates to: GGRSLEGLAYGAKQE*KGRVGAVLSEGCVR
Trigger: CCTTACACACCCCTCAGACAGTACAGCACCCACCCTGCCCTTCAACTCTTGCTTGGCCCCGTAAGCCAGTCCTTCCAGGCTCCTGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389168.6
CDS TCA 72 bp ACCGATAGGCCTCCTCGTACTGGCTGCTGTATGGGATaGTGCGGACGCAGCCCACGGGAAGCATGGTCCGAA +
Preference number: 6 (lower is better)
Translates to: TDRPPRTGCCMG*CGRSPREAWSE
Trigger: TTCGGACCATGCTTCCCGTGGGCTGCGTCCGCATCATCCCATACAGCAGCCAGTACGAGGAGGCCTATCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS TCA 72 bp GAGACTCCGAGGCTGTGGGGCTGCGGACCGTGGACATaGGGTGTGACTTGTAGGTCTTGCTCAGGCCAGTCA +
Preference number: 6 (lower is better)
Translates to: ETPRLWGCGPWT*GVTCRSCSGQS
Trigger: TGACTGGCCTGAGCAAGACCTACAAGTCACACCTCATGTCCACGGTCCGCAGCCCCACAGCCTCGGAGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS TCA 72 bp TGTGGACAGCCATCCCTGTCTTTAGGCAGGTGTGTGTaGCGGGTCAGTTCCGAGACTCCGAGGCTGTGGGGC +
Preference number: 6 (lower is better)
Translates to: CGQPSLSLGRCV*RVSSETPRLWG
Trigger: GCCCCACAGCCTCGGAGTCTCGGAACTGACCCGTCACACACACCTGCCTAAAGACAGGGATGGCTGTCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS TCA 72 bp GCCTGGAAGGACTGGCTTACGGGGCCAAGCAAGAGTTaGAGGGCAGGGTGGGTGCTGTACTGTCTGAGGGGT +
Preference number: 6 (lower is better)
Translates to: AWKDWLTGPSKS*RAGWVLYCLRG
Trigger: ACCCCTCAGACAGTACAGCACCCACCCTGCCCTTCAACTCTTGCTTGGCCCCGTAAGCCAGTCCTTCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389168.6
CDS TCA 72 bp CTAATGAGTGACCCAAGGCACCCAGGGGGATTCTCGTaGGTGGCCATCTGCGCTGCTCCCCACCTGTCTCCA +
Preference number: 6 (lower is better)
Translates to: LMSDPRHPGGFS*VAICAAPHLSP
Trigger: TGGAGACAGGTGGGGAGCAGCGCAGATGGCCACTCACGAGAATCCCCCTGGGTGCCTTGGGTCACTCATTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS TCA 72 bp CGAAGCCAGGTCTGTCTGATGCCAAAGGGCAAGCCCTaGGCCCGAAACCCCATACTGCGCATGCCCAGCACA +
Preference number: 6 (lower is better)
Translates to: RSQVCLMPKGKP*ARNPILRMPST
Trigger: TGTGCTGGGCATGCGCAGTATGGGGTTTCGGGCTCAGGGCTTGCCCTTTGGCATCAGACAGACCTGGCTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS GCA 72 bp GGAGACTGCAACAGGCCTGACGTTTCTGCAGTTGGCTaGTTAGCTGCACGAGCTGCTCCGGCACCTGTCCTC +
Preference number: 6 (lower is better)
Translates to: GDCNRPDVSAVG*LAARAAPAPVL
Trigger: GAGGACAGGTGCCGGAGCAGCTCGTGCAGCTAAGCAGCCAACTGCAGAAACGTCAGGCCTGTTGCAGTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285071.9
ENST00000389169.9
ENST00000389171.4
CDS GCA 72 bp CTGCCACACGCCTTCAGGAGCCAGGCAAAGGAGGTGTaGAGGCACGCCCACAGGTTGTCATCACTTGTCAGC +
Preference number: 6 (lower is better)
Translates to: LPHAFRSQAKEV*RHAHRLSSLVS
Trigger: GCTGACAAGTGATGACAACCTGTGGGCGTGCCTGCACACCTCCTTTGCCTGGCTCCTGAAGGCGTGTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285071.9
ENST00000389169.9
ENST00000466317.1
ENST00000480316.1
CDS GCA 72 bp AGGGCAAGCCCTGAGCCCGAAACCCCATACTGCGCATaGCCAGCACACCTGCGTTTCCAGCTCTCACAAAGG +
Preference number: 6 (lower is better)
Translates to: RASPEPETPYCA*PAHLRFQLSQR
Trigger: CCTTTGTGAGAGCTGGAAACGCAGGTGTGCTGGGCATGCGCAGTATGGGGTTTCGGGCTCAGGGCTTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS GCA 72 bp TGCCAAAGGGCAAGCCCTGAGCCCGAAACCCCATACTaGGCATGCCCAGCACACCTGCGTTTCCAGCTCTCA +
Preference number: 6 (lower is better)
Translates to: CQRASPEPETPY*ACPAHLRFQLS
Trigger: TGAGAGCTGGAAACGCAGGTGTGCTGGGCATGCGCAGTATGGGGTTTCGGGCTCAGGGCTTGCCCTTTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS GCA 72 bp CGAATGCACCACCCACCTGACGTTTCTGCAGTTGGCTaGTTAGCTGCACGAGCTGCTCCGGCACCTGTCCTC +
Preference number: 6 (lower is better)
Translates to: RMHHPPDVSAVG*LAARAAPAPVL
Trigger: GAGGACAGGTGCCGGAGCAGCTCGTGCAGCTAAGCAGCCAACTGCAGAAACGTCAGGTGGGTGGTGCATTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473853.1
CDS CCA 72 bp GGCCGTGGAGCTCGCAGAAGTGGCAGAGAGCCACGATaGCATTCATGGTGCCTTGGAGACTGCAACAGGCCT +
Preference number: 6 (lower is better)
Translates to: GRGARRSGREPR*HSWCLGDCNRP
Trigger: AGGCCTGTTGCAGTCTCCAAGGCACCATGAATGCCATCGTGGCTCTCTGCCACTTCTGCGAGCTCCACGGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285071.9
ENST00000389168.6
ENST00000389169.9
ENST00000389171.4
ENST00000461699.1
CDS CCA 72 bp AGCGATGTCAGCGAGCGGGCGGCGTTGCCGTTCCTCTaGTGTAGGAATGGCGTGAAGGCTGTGTTCATCCTC +
Preference number: 6 (lower is better)
Translates to: SDVSERAALPFL*CRNGVKAVFIL
Trigger: GAGGATGAACACAGCCTTCACGCCATTCCTACACCAGAGGAACGGCAACGCCGCCCGCTCGCTGACATCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285071.9
ENST00000389169.9
ENST00000466317.1
ENST00000480316.1
CDS CCA 72 bp GTTGCACCGATAGGCCTCCTCGTACTGGCTGCTGTATaGGATGATGCGGACGCAGCCCACGGGAAGCATGGT +
Preference number: 6 (lower is better)
Translates to: VAPIGLLVLAAV*DDADAAHGKHG
Trigger: ACCATGCTTCCCGTGGGCTGCGTCCGCATCATCCCATACAGCAGCCAGTACGAGGAGGCCTATCGGTGCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS CCA 72 bp AACAGCACCCCTGCCTCACCAGCGAGCTTCTCCATCTaGACCAAGGTATCCTCGGTCGGAGCACCTTCCAGG +
Preference number: 6 (lower is better)
Translates to: NSTPASPASFSI*TKVSSVGAPSR
Trigger: CCTGGAAGGTGCTCCGACCGAGGATACCTTGGTCCAGATGGAGAAGCTCGCTGGTGAGGCAGGGGTGCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389169.9
ENST00000466317.1
CDS CCA 72 bp GCTCGCAGAAGTGGCAGAGAGCCACGATGGCATTCATaGTGCCTTGGAGACTGCAACAGGCCTGCGTGGGAC +
Preference number: 6 (lower is better)
Translates to: ARRSGREPRWHS*CLGDCNRPAWD
Trigger: GTCCCACGCAGGCCTGTTGCAGTCTCCAAGGCACCATGAATGCCATCGTGGCTCTCTGCCACTTCTGCGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389168.6
CDS CCA 72 bp GCTCGCAGAAGTGGCAGAGAGCCACGATGGCATTCATaGTGCCTTGGAGACTGCAACAGGCCTCCTGCAGGG +
Preference number: 6 (lower is better)
Translates to: ARRSGREPRWHS*CLGDCNRPPAG
Trigger: CCCTGCAGGAGGCCTGTTGCAGTCTCCAAGGCACCATGAATGCCATCGTGGCTCTCTGCCACTTCTGCGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461699.1
CDS CAA 72 bp GAAGTGGCAGAGAGCCACGATGGCATTCATGGTGCCTaGGAGACTGCAACAGGCCTGCGTGGGACAGGGGAC +
Preference number: 6 (lower is better)
Translates to: EVAESHDGIHGA*ETATGLRGTGD
Trigger: GTCCCCTGTCCCACGCAGGCCTGTTGCAGTCTCCAAGGCACCATGAATGCCATCGTGGCTCTCTGCCACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389168.6
CDS CAA 90 bp CGGTCTGCAGCTACAGGGCTCCCACTGGTCACCACAAACTCGTACTaGCTGAGAGACTGGTCATCCTCACACCCCACAGGGTGGAGGGTG +
Preference number: 6 (lower is better)
Translates to: RSAATGLPLVTTNSY*LRDWSSSHPTGWRV
Trigger: CACCCTCCACCCTGTGGGGTGTGAGGATGACCAGTCTCTCAGCAAGTACGAGTTTGTGGTGACCAGTGGGAGCCCTGTAGCTGCAGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS CAA 90 bp GAGCTCGCAGAAGTGGCAGAGAGCCACGATGGCATTCATGGTGCCTaGGAGACTGCAACAGGCCTGCGTGGGACAGGGGACATGTCAGCT +
Preference number: 6 (lower is better)
Translates to: ELAEVAESHDGIHGA*ETATGLRGTGDMSA
Trigger: AGCTGACATGTCCCCTGTCCCACGCAGGCCTGTTGCAGTCTCCAAGGCACCATGAATGCCATCGTGGCTCTCTGCCACTTCTGCGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389168.6
CDS TCA 72 bp GCTGCTCCGGCACCTGTCCTCCTGCTGAGATACGGCTaGGCACGAGTGGTCACACTGACACTCAGCAGAATC +
Preference number: 6 (lower is better)
Translates to: AAPAPVLLLRYG*ARVVTLTLSRI
Trigger: GATTCTGCTGAGTGTCAGTGTGACCACTCGTGCTCAGCCGTATCTCAGCAGGAGGACAGGTGCCGGAGCAGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285071.9
ENST00000389169.9
ENST00000389171.4
ENST00000473853.1
CDS TCA 72 bp CGAGGCTGTGGGGCTGCGGACCGTGGACATGAGGTGTaGCTTGTAGGTCTTGCTCAGGCCAGTCATCCAGAA +
Preference number: 6 (lower is better)
Translates to: RGCGAADRGHEV*LVGLAQASHPE
Trigger: TTCTGGATGACTGGCCTGAGCAAGACCTACAAGTCACACCTCATGTCCACGGTCCGCAGCCCCACAGCCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS GCA 72 bp AGAGAGCCACGATGGCATTCATGGTGCCTTGGAGACTaGAACAGGCCTGCGTGGGACAGGGGACATGTCAGC +
Preference number: 6 (lower is better)
Translates to: REPRWHSWCLGD*NRPAWDRGHVS
Trigger: GCTGACATGTCCCCTGTCCCACGCAGGCCTGTTGCAGTCTCCAAGGCACCATGAATGCCATCGTGGCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389168.6
CDS GCA 72 bp GGCGGCCCATGCCTGGAACTGCTTCTTCAGCATGCCTaGGAATGCACCACCCACCTGACGTTTCTGCAGTTG +
Preference number: 6 (lower is better)
Translates to: GGPCLELLLQHA*ECTTHLTFLQL
Trigger: CAACTGCAGAAACGTCAGGTGGGTGGTGCATTCGCAGGCATGCTGAAGAAGCAGTTCCAGGCATGGGCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473853.1
CDS CCA 72 bp ACACAGGCCTGGCGGACAATGCTGAAGAGCTGGGGGTaGCTGGGGTGCTGGTGGCTGACGTATTTAATGGAG +
Preference number: 6 (lower is better)
Translates to: TQAWRTMLKSWG*LGCWWLTYLME
Trigger: CTCCATTAAATACGTCAGCCACCAGCACCCCAGCCACCCCCAGCTCTTCAGCATTGTCCGCCAGGCCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000285071.9
ENST00000389168.6
ENST00000389169.9
ENST00000389171.4
ENST00000417064.1
CDS CCA 72 bp AACTGCTCTGCCTCAAACACCTTGAGCGCCTTGCCCTaGAGCTCATCGATGATTCCCCGGACCTTCCCCAGC +
Preference number: 6 (lower is better)
Translates to: NCSASNTLSALP*SSSMIPRTFPS
Trigger: GCTGGGGAAGGTCCGGGGAATCATCGATGAGCTCCAGGGCAAGGCGCTCAAGGTGTTTGAGGCAGAGCAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285071.9
ENST00000389169.9
ENST00000480316.1
CDS CCA 72 bp AAGTGGCAGAGAGCCACGATGGCATTCATGGTGCCTTaGAGACTGCAACAGGCCTGCGTGGGACAGGGGACA +
Preference number: 6 (lower is better)
Translates to: KWQRATMAFMVP*RLQQACVGQGT
Trigger: TGTCCCCTGTCCCACGCAGGCCTGTTGCAGTCTCCAAGGCACCATGAATGCCATCGTGGCTCTCTGCCACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389168.6
CDS CAA 72 bp TCATCACTTGTCAGCGATGTCAGCGAGCGGGCGGCGTaGCCGTTCCTCTGGTGTAGGAATGGCGTGAAGGCT +
Preference number: 6 (lower is better)
Translates to: SSLVSDVSERAA*PFLWCRNGVKA
Trigger: AGCCTTCACGCCATTCCTACACCAGAGGAACGGCAACGCCGCCCGCTCGCTGACATCGCTGACAAGTGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285071.9
ENST00000389169.9
ENST00000466317.1
ENST00000480316.1
CDS CAA 90 bp CACAGGTTGTCATCACTTGTCAGCGATGTCAGCGAGCGGGCGGCGTaGCCGTTCCTCTGGTGTAGGAATGGCGTGAAGGCTGTGTTCATC +
Preference number: 6 (lower is better)
Translates to: HRLSSLVSDVSERAA*PFLWCRNGVKAVFI
Trigger: GATGAACACAGCCTTCACGCCATTCCTACACCAGAGGAACGGCAACGCCGCCCGCTCGCTGACATCGCTGACAAGTGATGACAACCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285071.9
ENST00000389169.9
ENST00000466317.1
ENST00000480316.1
CDS TCA 72 bp GCCAAATGGGTCAGGCATGGTGGTGGCAGACACCCTTaGAGACCTGGCGTTTTCTGCTCCCCAAATCGAGGC +
Preference number: 6 (lower is better)
Translates to: AKWVRHGGGRHP*RPGVFCSPNRG
Trigger: GCCTCGATTTGGGGAGCAGAAAACGCCAGGTCTTCAAGGGTGTCTGCCACCACCATGCCTGACCCATTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285071.9
ENST00000389169.9
ENST00000389171.4
CDS TCA 72 bp CCACGTCTCTGCTTTTCCAGATCACCTGGTTCCCCATaGGAACGTGCCAGGCCAGCATGCGGAAAGAAGGGG +
Preference number: 6 (lower is better)
Translates to: PRLCFSRSPGSP*ERARPACGKKG
Trigger: CCCCTTCTTTCCGCATGCTGGCCTGGCACGTTCTCATGGGGAACCAGGTGATCTGGAAAAGCAGAGACGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285071.9
ENST00000577591.1
CDS TCA 72 bp GCAAGAGTTGAAGGGCAGGGTGGGTGCTGTACTGTCTaGGGGGTGTGTAAGGTCCGGTGTCCAAAGAGCAGC +
Preference number: 6 (lower is better)
Translates to: ARVEGQGGCCTV*GVCKVRCPKSS
Trigger: GCTGCTCTTTGGACACCGGACCTTACACACCCCTCAGACAGTACAGCACCCACCCTGCCCTTCAACTCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389168.6
CDS GCA 72 bp GGGGAAGCCCAGGCACCTGGGAGGTCAGGGAACCACTaGCCTTCATGGAAAACTTGGGACGAACTGAAACAG +
Preference number: 6 (lower is better)
Translates to: GEAQAPGRSGNH*PSWKTWDELKQ
Trigger: CTGTTTCAGTTCGTCCCAAGTTTTCCATGAAGGGCAGTGGTTCCCTGACCTCCCAGGTGCCTGGGCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS GCA 72 bp AGCCCGAAACCCCATACTGCGCATGCCCAGCACACCTaGGTTTCCAGCTCTCACAAAGGCTTCGACAGACCT +
Preference number: 6 (lower is better)
Translates to: SPKPHTAHAQHT*VSSSHKGFDRP
Trigger: AGGTCTGTCGAAGCCTTTGTGAGAGCTGGAAACGCAGGTGTGCTGGGCATGCGCAGTATGGGGTTTCGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS CCA 72 bp ACACGAGGCTGCTGCCAAATGGGTCAGGCATGGTGGTaGCAGACACCCTTGAAGACCTGGCGTTTTCTGCTC +
Preference number: 6 (lower is better)
Translates to: TRGCCQMGQAWW*QTPLKTWRFLL
Trigger: GAGCAGAAAACGCCAGGTCTTCAAGGGTGTCTGCCACCACCATGCCTGACCCATTTGGCAGCAGCCTCGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285071.9
ENST00000389169.9
ENST00000389171.4
CDS CCA 72 bp CACACACGAGGCTGCTGCCAAATGGGTCAGGCATGGTaGTGGCAGACACCCTTGAAGACCTGGCGTTTTCTG +
Preference number: 6 (lower is better)
Translates to: HTRGCCQMGQAW*WQTPLKTWRFL
Trigger: CAGAAAACGCCAGGTCTTCAAGGGTGTCTGCCACCACCATGCCTGACCCATTTGGCAGCAGCCTCGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285071.9
ENST00000389169.9
ENST00000389171.4
CDS CCA 72 bp CACCACACACGAGGCTGCTGCCAAATGGGTCAGGCATaGTGGTGGCAGACACCCTTGAAGACCTGGCGTTTT +
Preference number: 6 (lower is better)
Translates to: HHTRGCCQMGQA*WWQTPLKTWRF
Trigger: AAAACGCCAGGTCTTCAAGGGTGTCTGCCACCACCATGCCTGACCCATTTGGCAGCAGCCTCGTGTGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285071.9
ENST00000389169.9
ENST00000389171.4
CDS CAA 72 bp CTCAGGCCAGTCATCCAGAACTTCAGCAGCTTGACATaGTCCTCCTCGGACGCACCCAGGATGCTCAGCAGC +
Preference number: 6 (lower is better)
Translates to: LRPVIQNFSSLT*SSSDAPRMLSS
Trigger: GCTGCTGAGCATCCTGGGTGCGTCCGAGGAGGACAATGTCAAGCTGCTGAAGTTCTGGATGACTGGCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS CAA 90 bp AGGCAGACGAGGCACTGGTCCACCACATCCACAGACAGGTTCTGGTaGGTCAGAGCCGCTTCAATCTTATTCAGGATGGTGGGGCCCACT +
Preference number: 6 (lower is better)
Translates to: RQTRHWSTTSTDRFW*VRAASILFRMVGPT
Trigger: AGTGGGCCCCACCATCCTGAATAAGATTGAAGCGGCTCTGACCAACCAGAACCTGTCTGTGGATGTGGTGGACCAGTGCCTCGTCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS TCA 72 bp TCGGACCCCTACTCGTTCACAGCCAACTCCAGGACCTaGCTCCTGGAGGATCAGTCCCACTATACTCTCTCC +
Preference number: 6 (lower is better)
Translates to: SDPYSFTANSRT*LLEDQSHYTLS
Trigger: GGAGAGAGTATAGTGGGACTGATCCTCCAGGAGTCAGGTCCTGGAGTTGGCTGTGAACGAGTAGGGGTCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS GCA 72 bp ATGGAGGTCTCTTTATCATGGCTGATATATCCCGGGTaGCCTGCAGCAAGTGACCGGCAGCCCTCGCACATG +
Preference number: 6 (lower is better)
Translates to: MEVSLSWLIYPG*PAASDRQPSHM
Trigger: CATGTGCGAGGGCTGCCGGTCACTTGCTGCAGGGCACCCGGGATATATCAGCCATGATAAAGAGACCTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285071.9
ENST00000389168.6
ENST00000389169.9
ENST00000389171.4
ENST00000417064.1
CDS GCA 72 bp GGGGAGCTCCAGAGTCACCCCAGTGACCAGGTAAACTaGTTTAGCAAGGTGGGACTGGAATGTCACATGGCC +
Preference number: 6 (lower is better)
Translates to: GELQSHPSDQVN*FSKVGLECHMA
Trigger: GGCCATGTGACATTCCAGTCCCACCTTGCTAAAGCAGTTTACCTGGTCACTGGGGTGACTCTGGAGCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389168.6
CDS CCA 72 bp GCTCGCAGAAGTGGCAGAGAGCCACGATGGCATTCATaGTGCCTTGGAGACTGCAACAGGCCTGACGTTTCT +
Preference number: 6 (lower is better)
Translates to: ARRSGREPRWHS*CLGDCNRPDVS
Trigger: AGAAACGTCAGGCCTGTTGCAGTCTCCAAGGCACCATGAATGCCATCGTGGCTCTCTGCCACTTCTGCGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285071.9
ENST00000389169.9
ENST00000389171.4
CDS CCA 72 bp CGGTCCATCATGATGGTGATGATGCTGTACCAGCGCTaGAAGCCCCTGGCCAGGCTGTCCTTGATGAAGAAG +
Preference number: 6 (lower is better)
Translates to: RSIMMVMMLYQR*KPLARLSLMKK
Trigger: CTTCTTCATCAAGGACAGCCTGGCCAGGGGCTTCCAGCGCTGGTACAGCATCATCACCATCATGATGGACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285071.9
ENST00000389169.9
ENST00000417064.1
ENST00000480316.1
CDS CCA 72 bp CCACTGGTCACCACAAACTCGTACTTGCTGAGAGACTaGTCATCCTCACACCCCACAGGGTGGAGGGTGGAA +
Preference number: 6 (lower is better)
Translates to: PLVTTNSYLLRD*SSSHPTGWRVE
Trigger: TTCCACCCTCCACCCTGTGGGGTGTGAGGATGACCAGTCTCTCAGCAAGTACGAGTTTGTGGTGACCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS CAA 72 bp GTCTTGCTCAGGCCAGTCATCCAGAACTTCAGCAGCTaGACATTGTCCTCCTCGGACGCACCCAGGATGCTC +
Preference number: 6 (lower is better)
Translates to: VLLRPVIQNFSS*TLSSSDAPRML
Trigger: GAGCATCCTGGGTGCGTCCGAGGAGGACAATGTCAAGCTGCTGAAGTTCTGGATGACTGGCCTGAGCAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS CAA 72 bp TGCAACAGGCCTGCGTGGGACAGGGGACATGTCAGCTaGCCAATGCCTATTGACTCCATGAAACCTCCCCAG +
Preference number: 6 (lower is better)
Translates to: CNRPAWDRGHVS*PMPIDSMKPPQ
Trigger: CTGGGGAGGTTTCATGGAGTCAATAGGCATTGGCAAGCTGACATGTCCCCTGTCCCACGCAGGCCTGTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389168.6
CDS TCA 72 bp TGGTGTAGGAATGGCGTGAAGGCTGTGTTCATCCTCTaGGCACGCTGTGGGCATCCAAACTGCTCTGCCTCA +
Preference number: 6 (lower is better)
Translates to: WCRNGVKAVFIL*ARCGHPNCSAS
Trigger: TGAGGCAGAGCAGTTTGGATGCCCACAGCGTGCTCAGAGGATGAACACAGCCTTCACGCCATTCCTACACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000285071.9
ENST00000389169.9
ENST00000466317.1
ENST00000480316.1
CDS TCA 72 bp TCTTGCTCAGGCCAGTCATCCAGAACTTCAGCAGCTTaGCATTGTCCTCCTCGGACGCACCCAGGATGCTCA +
Preference number: 6 (lower is better)
Translates to: SCSGQSSRTSAA*HCPPRTHPGCS
Trigger: TGAGCATCCTGGGTGCGTCCGAGGAGGACAATGTCAAGCTGCTGAAGTTCTGGATGACTGGCCTGAGCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS TCA 72 bp GCGTTAATAACGGGGAGAGTGGCACAGTGGGGGCCATaGGAGCCGAAGACTGTACTCTTCTGCTCCTGTGAT +
Preference number: 6 (lower is better)
Translates to: ALITGRVAQWGP*EPKTVLFCSCD
Trigger: ATCACAGGAGCAGAAGAGTACAGTCTTCGGCTCTCATGGCCCCCACTGTGCCACTCTCCCCGTTATTAACGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480316.1
CDS GCA 72 bp ATGCAAAGGGAAGGGATGGCCTCTTTAAGCCAAAGCTaGCAGCAGCTCGGACCCCTACTCGTTCACAGCCAA +
Preference number: 6 (lower is better)
Translates to: MQREGMASLSQS*QQLGPLLVHSQ
Trigger: TTGGCTGTGAACGAGTAGGGGTCCGAGCTGCTGGCAGCTTTGGCTTAAAGAGGCCATCCCTTCCCTTTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS CCA 72 bp TGGCGTGAAGGCTGTGTTCATCCTCTGAGCACGCTGTaGGCATCCAAACTGCTCTGCCTCAAACACCTTGAG +
Preference number: 6 (lower is better)
Translates to: WREGCVHPLSTL*ASKLLCLKHLE
Trigger: CTCAAGGTGTTTGAGGCAGAGCAGTTTGGATGCCCACAGCGTGCTCAGAGGATGAACACAGCCTTCACGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285071.9
ENST00000389169.9
ENST00000480316.1
CDS CCA 72 bp GCTGTGACAGAGCCACAGCCACAAAGCCAACGGCGCTaGAAAGGAATGTCCTCAAGTGACATGAACTGCAGC +
Preference number: 6 (lower is better)
Translates to: AVTEPQPQSQRR*KGMSSSDMNCS
Trigger: GCTGCAGTTCATGTCACTTGAGGACATTCCTTTCCAGCGCCGTTGGCTTTGTGGCTGTGGCTCTGTCACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389168.6
CDS CCA 72 bp CATTCATGGTGCCTTGGAGACTGCAACAGGCCTGCGTaGGACAGGGGACATGTCAGCTTGCCAATGCCTATT +
Preference number: 6 (lower is better)
Translates to: HSWCLGDCNRPA*DRGHVSLPMPI
Trigger: AATAGGCATTGGCAAGCTGACATGTCCCCTGTCCCACGCAGGCCTGTTGCAGTCTCCAAGGCACCATGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389168.6
CDS CCA 72 bp GATCAAATCATCCCTGATGGAAAGCTTGGCCAAGACTaGCCCAGTGCTTCCAGGCTGGTGCACACAGTGCCA +
Preference number: 6 (lower is better)
Translates to: DQIIPDGKLGQD*PSASRLVHTVP
Trigger: TGGCACTGTGTGCACCAGCCTGGAAGCACTGGGCCAGTCTTGGCCAAGCTTTCCATCAGGGATGATTTGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS CAA 72 bp GAAGTGGCAGAGAGCCACGATGGCATTCATGGTGCCTaGGAGACTGCAACAGGCCTGACGTTTCTGCAGTTG +
Preference number: 6 (lower is better)
Translates to: EVAESHDGIHGA*ETATGLTFLQL
Trigger: CAACTGCAGAAACGTCAGGCCTGTTGCAGTCTCCAAGGCACCATGAATGCCATCGTGGCTCTCTGCCACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285071.9
ENST00000389169.9
ENST00000389171.4
CDS TCA 72 bp GCCCACGGGAAGCATGGTCCGAAGTACTTCAAAAGCTaGCTGGACGAGGTCCACGTCTCTGCTTTTCCAGAT +
Preference number: 6 (lower is better)
Translates to: AHGKHGPKYFKS*LDEVHVSAFPD
Trigger: ATCTGGAAAAGCAGAGACGTGGACCTCGTCCAGTCAGCTTTTGAAGTACTTCGGACCATGCTTCCCGTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS TCA 72 bp AGGAGAGGACAGTTGAGGGCAGGCACACAGCCACACTaGATGAGAACAGTAAGGGAGCTTGGTGTGTCGAAC +
Preference number: 6 (lower is better)
Translates to: RRGQLRAGTQPH*MRTVRELGVSN
Trigger: GTTCGACACACCAAGCTCCCTTACTGTTCTCATTCAGTGTGGCTGTGTGCCTGCCCTCAACTGTCCTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389168.6
ENST00000389171.4
CDS TCA 72 bp TCCCCTTCTGGGTGCACTACTTGGCTAAGGCACACGTaGCTGGCTCTGGTCAATGAGCTGAGACAAACAAGG +
Preference number: 6 (lower is better)
Translates to: SPSGCTTWLRHT*LALVNELRQTR
Trigger: CCTTGTTTGTCTCAGCTCATTGACCAGAGCCAGTCACGTGTGCCTTAGCCAAGTAGTGCACCCAGAAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS TCA 72 bp AGGGCATGGGGGTGGATTCCCAGGCTTTGTCTTTCCTaGCCAGGTTTTGCTCTTGCTGAGACTCCATTGGCA +
Preference number: 6 (lower is better)
Translates to: RAWGWIPRLCLS*PGFALAETPLA
Trigger: TGCCAATGGAGTCTCAGCAAGAGCAAAACCTGGTCAGGAAAGACAAAGCCTGGGAATCCACCCCCATGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS GCA 72 bp TTGATGAAGAAGGTGTGGCTGAACACAAAGCCGTGCTaGTCATCTCCGAAGAAGATGGGGCCTTCACGGCCA +
Preference number: 6 (lower is better)
Translates to: LMKKVWLNTKPC*SSPKKMGPSRP
Trigger: TGGCCGTGAAGGCCCCATCTTCTTCGGAGATGAGCAGCACGGCTTTGTGTTCAGCCACACCTTCTTCATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285071.9
ENST00000389169.9
ENST00000417064.1
ENST00000480316.1
CDS GCA 72 bp TCCTTGATGAAGAAGGTGTGGCTGAACACAAAGCCGTaGTGCTCATCTCCGAAGAAGATGGGGCCTTCACGG +
Preference number: 6 (lower is better)
Translates to: SLMKKVWLNTKP*CSSPKKMGPSR
Trigger: CCGTGAAGGCCCCATCTTCTTCGGAGATGAGCAGCACGGCTTTGTGTTCAGCCACACCTTCTTCATCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000285071.9
ENST00000389169.9
ENST00000417064.1
ENST00000480316.1
CDS GCA 72 bp GAGGGTCCTCCACCCAATACATATCTGCTTGGCACCTaGTCCATGTGGGCCAAGGTGCTAGGCAACATGATA +
Preference number: 6 (lower is better)
Translates to: EGPPPNTYLLGT*SMWAKVLGNMI
Trigger: TATCATGTTGCCTAGCACCTTGGCCCACATGGAGCAGGTGCCAAGCAGATATGTATTGGGTGGAGGACCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389168.6
CDS GCA 72 bp GGTCTCCCAAGAGCTGGGATTCCAGGCGTGCACCAGTaGCTGACTTCGTTCTTTATGGCTACATCCAACATC +
Preference number: 6 (lower is better)
Translates to: GLPRAGIPGVHQ*LTSFFMATSNI
Trigger: GATGTTGGATGTAGCCATAAAGAACGAAGTCAGGCACTGGTGCACGCCTGGAATCCCAGCTCTTGGGAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS CCA 72 bp GGCACTGGTCCACCACATCCACAGACAGGTTCTGGTTaGTCAGAGCCGCTTCAATCTTATTCAGGATGGTGG +
Preference number: 6 (lower is better)
Translates to: GTGPPHPQTGSG*SEPLQSYSGWW
Trigger: CCACCATCCTGAATAAGATTGAAGCGGCTCTGACCAACCAGAACCTGTCTGTGGATGTGGTGGACCAGTGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS CCA 72 bp CCATGGGAGTCACAGCAAATAGGGGAGGGGACAATGTaGACCAATGATAGCACAGCTGGAGCTGTGACAGAG +
Preference number: 6 (lower is better)
Translates to: PWESQQIGEGTM*TNDSTAGAVTE
Trigger: CTCTGTCACAGCTCCAGCTGTGCTATCATTGGTCCACATTGTCCCCTCCCCTATTTGCTGTGACTCCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389168.6
CDS CCA 72 bp CCTACTCGTTCACAGCCAACTCCAGGACCTGACTCCTaGAGGATCAGTCCCACTATACTCTCTCCATGCAGA +
Preference number: 6 (lower is better)
Translates to: PTRSQPTPGPDS*RISPTILSPCR
Trigger: TCTGCATGGAGAGAGTATAGTGGGACTGATCCTCCAGGAGTCAGGTCCTGGAGTTGGCTGTGAACGAGTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS CCA 72 bp TGGCGTGAAGGCTGTGTTCATCCTCTGAGCACGCTGTaGGCATCCAAACTGCTCTGCCTCAAACACCTGAAA +
Preference number: 6 (lower is better)
Translates to: WREGCVHPLSTL*ASKLLCLKHLK
Trigger: TTTCAGGTGTTTGAGGCAGAGCAGTTTGGATGCCCACAGCGTGCTCAGAGGATGAACACAGCCTTCACGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS CCA 72 bp CCTGCACCTGCCTGCAGAAACACCTCGAAACAGCTCTaGCTGTTTGGAAGGCTGGTCATTTGCAAGCAGAAG +
Preference number: 6 (lower is better)
Translates to: PAPACRNTSKQL*LFGRLVICKQK
Trigger: CTTCTGCTTGCAAATGACCAGCCTTCCAAACAGCCAGAGCTGTTTCGAGGTGTTTCTGCAGGCAGGTGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS CCA 72 bp GCTCCTGACAGGCAGGCTGTGAACACAAACAAGGCATaGCCTGCCAAAGCCGCTAACTCTAGGAAGAAGCAA +
Preference number: 6 (lower is better)
Translates to: APDRQAVNTNKA*PAKAANSRKKQ
Trigger: TTGCTTCTTCCTAGAGTTAGCGGCTTTGGCAGGCCATGCCTTGTTTGTGTTCACAGCCTGCCTGTCAGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473853.1
CDS CAA 90 bp TCCTCGGACGCACCCAGGATGCTCAGCAGCTTCTGTGTGTCCTCTTaGGGTCGACTGTCCACCTTGGTGAACTTAAAAAGCACCTTCACT +
Preference number: 6 (lower is better)
Translates to: SSDAPRMLSSFCVSS*GRLSTLVNLKSTFT
Trigger: AGTGAAGGTGCTTTTTAAGTTCACCAAGGTGGACAGTCGACCCAAAGAGGACACACAGAAGCTGCTGAGCATCCTGGGTGCGTCCGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS CAA 90 bp GGGGGTGGATTCCCAGGCTTTGTCTTTCCTGACCAGGTTTTGCTCTaGCTGAGACTCCATTGGCAAAGCTTATTTGAGGGCACGCCTGCA +
Preference number: 6 (lower is better)
Translates to: GGGFPGFVFPDQVLL*LRLHWQSLFEGTPA
Trigger: TGCAGGCGTGCCCTCAAATAAGCTTTGCCAATGGAGTCTCAGCAAGAGCAAAACCTGGTCAGGAAAGACAAAGCCTGGGAATCCACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS CAA 90 bp GGGCATGGGGGTGGATTCCCAGGCTTTGTCTTTCCTGACCAGGTTTaGCTCTTGCTGAGACTCCATTGGCAAAGCTTATTTGAGGGCACG +
Preference number: 6 (lower is better)
Translates to: GHGGGFPGFVFPDQV*LLLRLHWQSLFEGT
Trigger: CGTGCCCTCAAATAAGCTTTGCCAATGGAGTCTCAGCAAGAGCAAAACCTGGTCAGGAAAGACAAAGCCTGGGAATCCACCCCCATGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS TCA 72 bp ACAAAGCCAACGGCGCTGGAAAGGAATGTCCTCAAGTaGCATGAACTGCAGCCAAACCTGGCAAACCCTGTG +
Preference number: 6 (lower is better)
Translates to: TKPTALERNVLK*HELQPNLANPV
Trigger: CACAGGGTTTGCCAGGTTTGGCTGCAGTTCATGTCACTTGAGGACATTCCTTTCCAGCGCCGTTGGCTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389168.6
CDS TCA 72 bp TACTTGGCTAAGGCACACGTGACTGGCTCTGGTCAATaGGCTGAGACAAACAAGGCCCTCAGCACCATCTGT +
Preference number: 6 (lower is better)
Translates to: YLAKAHVTGSGQ*AETNKALSTIC
Trigger: ACAGATGGTGCTGAGGGCCTTGTTTGTCTCAGCTCATTGACCAGAGCCAGTCACGTGTGCCTTAGCCAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS TCA 72 bp TACGGATCCAAAAGTCAGACGTTCTGTCTTCGCTCCTaGCAGGCAGGCTGTGAACACAAACAAGGCATGGCC +
Preference number: 6 (lower is better)
Translates to: YGSKSQTFCLRS*QAGCEHKQGMA
Trigger: GGCCATGCCTTGTTTGTGTTCACAGCCTGCCTGTCAGGAGCGAAGACAGAACGTCTGACTTTTGGATCCGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473853.1
CDS GCA 72 bp CCGGTCCACTTTTGTTTTAGCTTGAGGGCGTACGTGTaGGGCTTTGTTACAAGGGTATGCTGCGTGGTGCTA +
Preference number: 6 (lower is better)
Translates to: PVHFCFSLRAYV*GFVTRVCCVVL
Trigger: TAGCACCACGCAGCATACCCTTGTAACAAAGCCGCACACGTACGCCCTCAAGCTAAAACAAAAGTGGACCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS CCA 72 bp ACAATGCTGAAGAGCTGGGGGTGGCTGGGGTGCTGGTaGCTGACGTATTTAATGGAGGTCTCTTTATCATGG +
Preference number: 6 (lower is better)
Translates to: TMLKSWGWLGCW*LTYLMEVSLSW
Trigger: CCATGATAAAGAGACCTCCATTAAATACGTCAGCCACCAGCACCCCAGCCACCCCCAGCTCTTCAGCATTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000285071.9
ENST00000389168.6
ENST00000389169.9
ENST00000389171.4
ENST00000417064.1
CDS CCA 72 bp TCTGATTCCTCTTCTAAATCAGCGAGCTTCTCCATCTaGACCAAGGTATCCTCGGTCGGAGCACCTTCCAGG +
Preference number: 6 (lower is better)
Translates to: SDSSSKSASFSI*TKVSSVGAPSR
Trigger: CCTGGAAGGTGCTCCGACCGAGGATACCTTGGTCCAGATGGAGAAGCTCGCTGATTTAGAAGAGGAATCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS CCA 72 bp ACGAGGCACTGGTCCACCACATCCACAGACAGGTTCTaGTTGGTCAGAGCCGCTTCAATCTTATTCAGGATG +
Preference number: 6 (lower is better)
Translates to: TRHWSTTSTDRF*LVRAASILFRM
Trigger: CATCCTGAATAAGATTGAAGCGGCTCTGACCAACCAGAACCTGTCTGTGGATGTGGTGGACCAGTGCCTCGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS CCA 72 bp TTTCCTGACCAGGTTTTGCTCTTGCTGAGACTCCATTaGCAAAGCTTATTTGAGGGCACGCCTGCACCTGCC +
Preference number: 6 (lower is better)
Translates to: FPDQVLLLLRLH*QSLFEGTPAPA
Trigger: GGCAGGTGCAGGCGTGCCCTCAAATAAGCTTTGCCAATGGAGTCTCAGCAAGAGCAAAACCTGGTCAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS CCA 72 bp CTGCGTTTCCAGCTCTCACAAAGGCTTCGACAGACCTaGCTCTTCGTGCTAAAAAGCTCACCAAGACACTGC +
Preference number: 6 (lower is better)
Translates to: LRFQLSQRLRQT*LFVLKSSPRHC
Trigger: GCAGTGTCTTGGTGAGCTTTTTAGCACGAAGAGCCAGGTCTGTCGAAGCCTTTGTGAGAGCTGGAAACGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS CAA 72 bp GCACCCAGGATGCTCAGCAGCTTCTGTGTGTCCTCTTaGGGTCGACTGTCCACCTTGGTGAACTTAAAAAGC +
Preference number: 6 (lower is better)
Translates to: APRMLSSFCVSS*GRLSTLVNLKS
Trigger: GCTTTTTAAGTTCACCAAGGTGGACAGTCGACCCAAAGAGGACACACAGAAGCTGCTGAGCATCCTGGGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS CAA 72 bp CTGCCTGCAGAAACACCTCGAAACAGCTCTGGCTGTTaGGAAGGCTGGTCATTTGCAAGCAGAAGCATGGGA +
Preference number: 6 (lower is better)
Translates to: LPAETPRNSSGC*EGWSFASRSMG
Trigger: TCCCATGCTTCTGCTTGCAAATGACCAGCCTTCCAAACAGCCAGAGCTGTTTCGAGGTGTTTCTGCAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS CAA 90 bp CGCCTGCACCTGCCTGCAGAAACACCTCGAAACAGCTCTGGCTGTTaGGAAGGCTGGTCATTTGCAAGCAGAAGCATGGGAAGCATTATT +
Preference number: 6 (lower is better)
Translates to: RLHLPAETPRNSSGC*EGWSFASRSMGSII
Trigger: AATAATGCTTCCCATGCTTCTGCTTGCAAATGACCAGCCTTCCAAACAGCCAGAGCTGTTTCGAGGTGTTTCTGCAGGCAGGTGCAGGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS TCA 72 bp GGCTACATCAGGAGCTATCCGAGAACAGAAATCGGTTaGGCTTCTCCTGTCCCCTTCCTAATGAGTGACCCA +
Preference number: 6 (lower is better)
Translates to: GYIRSYPRTEIG*ASPVPFLMSDP
Trigger: TGGGTCACTCATTAGGAAGGGGACAGGAGAAGCTCAACCGATTTCTGTTCTCGGATAGCTCCTGATGTAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS TCA 72 bp TACCACAGACCTGTAGCACCAAGATCAAATCATCCCTaGTGGAAAGCTTGGCCAAGACTGGCCCAGTGCTTC +
Preference number: 6 (lower is better)
Translates to: YHRPVAPRSNHP*WKAWPRLAQCF
Trigger: GAAGCACTGGGCCAGTCTTGGCCAAGCTTTCCATCAGGGATGATTTGATCTTGGTGCTACAGGTCTGTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS GCA 72 bp GACTCCTGGAGGATCAGTCCCACTATACTCTCTCCATaGAGAGCACACAAAGTGCCACCAGTCCAATCATTC +
Preference number: 6 (lower is better)
Translates to: DSWRISPTILSP*RAHKVPPVQSF
Trigger: GAATGATTGGACTGGTGGCACTTTGTGTGCTCTGCATGGAGAGAGTATAGTGGGACTGATCCTCCAGGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS CCA 72 bp TGCCTGCAGAAACACCTCGAAACAGCTCTGGCTGTTTaGAAGGCTGGTCATTTGCAAGCAGAAGCATGGGAA +
Preference number: 6 (lower is better)
Translates to: CLQKHLETALAV*KAGHLQAEAWE
Trigger: TTCCCATGCTTCTGCTTGCAAATGACCAGCCTTCCAAACAGCCAGAGCTGTTTCGAGGTGTTTCTGCAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS TCA 72 bp CAGGCTTTGTCTTTCCTGACCAGGTTTTGCTCTTGCTaGGACTCCATTGGCAAAGCTTATTTGAGGGCACGC +
Preference number: 6 (lower is better)
Translates to: QALSFLTRFCSC*DSIGKAYLRAR
Trigger: GCGTGCCCTCAAATAAGCTTTGCCAATGGAGTCTCAGCAAGAGCAAAACCTGGTCAGGAAAGACAAAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS GCA 72 bp GTCCCACTATACTCTCTCCATGCAGAGCACACAAAGTaGCACCAGTCCAATCATTCCCAACAGCATAGCTCT +
Preference number: 6 (lower is better)
Translates to: VPLYSLHAEHTK*HQSNHSQQHSS
Trigger: AGAGCTATGCTGTTGGGAATGATTGGACTGGTGGCACTTTGTGTGCTCTGCATGGAGAGAGTATAGTGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS GCA 72 bp ACCTGGCTCTTCGTGCTAAAAAGCTCACCAAGACACTaGCCTTGCCATCTGCACCTGCCTAGAAACATGATT +
Preference number: 6 (lower is better)
Translates to: TWLFVLKSSPRH*PCHLHLPRNMI
Trigger: AATCATGTTTCTAGGCAGGTGCAGATGGCAAGGGCAGTGTCTTGGTGAGCTTTTTAGCACGAAGAGCCAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS CAA 72 bp TTAAAAAGCACCTTCACTTTGTTCATCCACTCCTCCTaGAGGCAGACGAGGCACTGGTCCACCACATCCACA +
Preference number: 6 (lower is better)
Translates to: LKSTFTLFIHSS*RQTRHWSTTST
Trigger: TGTGGATGTGGTGGACCAGTGCCTCGTCTGCCTCAAGGAGGAGTGGATGAACAAAGTGAAGGTGCTTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS CAA 90 bp ATGCTCAGCAGCTTCTGTGTGTCCTCTTTGGGTCGACTGTCCACCTaGGTGAACTTAAAAAGCACCTTCACTTTGTTCATCCACTCCTCC +
Preference number: 6 (lower is better)
Translates to: MLSSFCVSSLGRLST*VNLKSTFTLFIHSS
Trigger: GGAGGAGTGGATGAACAAAGTGAAGGTGCTTTTTAAGTTCACCAAGGTGGACAGTCGACCCAAAGAGGACACACAGAAGCTGCTGAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS TCA 72 bp AGTGACATGAACTGCAGCCAAACCTGGCAAACCCTGTaGGAACAAATAGATAAAAGGCCACAGGGAGAGGGT +
Preference number: 6 (lower is better)
Translates to: SDMNCSQTWQTL*EQIDKRPQGEG
Trigger: ACCCTCTCCCTGTGGCCTTTTATCTATTTGTTCTCACAGGGTTTGCCAGGTTTGGCTGCAGTTCATGTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389168.6
CDS TCA 72 bp GCCATGAGAGCCGAAGACTGTACTCTTCTGCTCCTGTaGTCAAGCTTCCAACAACACTTGTCATTGTGGACT +
Preference number: 6 (lower is better)
Translates to: AMRAEDCTLLLL*SSFQQHLSLWT
Trigger: AGTCCACAATGACAAGTGTTGTTGGAAGCTTGATCACAGGAGCAGAAGAGTACAGTCTTCGGCTCTCATGGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480316.1
CDS GCA 72 bp CTCTTCGTGCTAAAAAGCTCACCAAGACACTGCCCTTaGCATCTGCACCTGCCTAGAAACATGATTAGCACT +
Preference number: 6 (lower is better)
Translates to: LFVLKSSPRHCP*HLHLPRNMIST
Trigger: AGTGCTAATCATGTTTCTAGGCAGGTGCAGATGGCAAGGGCAGTGTCTTGGTGAGCTTTTTAGCACGAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS CAA 90 bp CAGAAACACCTCGAAACAGCTCTGGCTGTTTGGAAGGCTGGTCATTaGCAAGCAGAAGCATGGGAAGCATTATTAATGACATGTGGTGTG +
Preference number: 6 (lower is better)
Translates to: QKHLETALAVWKAGH*QAEAWEALLMTCGV
Trigger: CACACCACATGTCATTAATAATGCTTCCCATGCTTCTGCTTGCAAATGACCAGCCTTCCAAACAGCCAGAGCTGTTTCGAGGTGTTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS CCA 72 bp GCAAGCAGAAGCATGGGAAGCATTATTAATGACATGTaGTGTGGAACAATGGTCGTACCACAGACCTGTAGC +
Preference number: 6 (lower is better)
Translates to: ASRSMGSIINDM*CGTMVVPQTCS
Trigger: GCTACAGGTCTGTGGTACGACCATTGTTCCACACCACATGTCATTAATAATGCTTCCCATGCTTCTGCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS CCA 72 bp GAAACACCTCGAAACAGCTCTGGCTGTTTGGAAGGCTaGTCATTTGCAAGCAGAAGCATGGGAAGCATTATT +
Preference number: 6 (lower is better)
Translates to: ETPRNSSGCLEG*SFASRSMGSII
Trigger: AATAATGCTTCCCATGCTTCTGCTTGCAAATGACCAGCCTTCCAAACAGCCAGAGCTGTTTCGAGGTGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS CCA 72 bp CTTTGTTACAAGGGTATGCTGCGTGGTGCTAAAGTTTaGGCTTCTATGAATCCTGTCACCCAGACAGTGAAC +
Preference number: 6 (lower is better)
Translates to: LCYKGMLRGAKV*ASMNPVTQTVN
Trigger: GTTCACTGTCTGGGTGACAGGATTCATAGAAGCCCAAACTTTAGCACCACGCAGCATACCCTTGTAACAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS CAA 72 bp GGTGGATTCCCAGGCTTTGTCTTTCCTGACCAGGTTTaGCTCTTGCTGAGACTCCATTGGCAAAGCTTATTT +
Preference number: 6 (lower is better)
Translates to: GGFPGFVFPDQV*LLLRLHWQSLF
Trigger: AAATAAGCTTTGCCAATGGAGTCTCAGCAAGAGCAAAACCTGGTCAGGAAAGACAAAGCCTGGGAATCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS TCA 72 bp AAGGGAGCTTGGTGTGTCGAACTGGGTGGACACCAATaGCAAGGAAGTTTAGTAACTGAACGACGAATTCTT +
Preference number: 6 (lower is better)
Translates to: KGAWCVELGGHQ*QGSLVTERRIL
Trigger: AAGAATTCGTCGTTCAGTTACTAAACTTCCTTGTCATTGGTGTCCACCCAGTTCGACACACCAAGCTCCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389168.6
ENST00000389171.4
CDS CCA 72 bp GGGAGGTCAGGGAACCACTGCCCTTCATGGAAAACTTaGGACGAACTGAAACAGAACACTTTATTTGTAAAG +
Preference number: 6 (lower is better)
Translates to: GRSGNHCPSWKT*DELKQNTLFVK
Trigger: CTTTACAAATAAAGTGTTCTGTTTCAGTTCGTCCCAAGTTTTCCATGAAGGGCAGTGGTTCCCTGACCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS CCA 72 bp AATCAAAGCCTCTTCTTCAGACTTTTCAGAGTCAGCTaGCACAAATCAGCCAGCGTTAATAACGGGGAGAGT +
Preference number: 6 (lower is better)
Translates to: NQSLFFRLFRVS*HKSASVNNGES
Trigger: ACTCTCCCCGTTATTAACGCTGGCTGATTTGTGCCAGCTGACTCTGAAAAGTCTGAAGAAGAGGCTTTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480316.1
CDS CAA 72 bp AGCTTCTGTGTGTCCTCTTTGGGTCGACTGTCCACCTaGGTGAACTTAAAAAGCACCTTCACTTTGTTCATC +
Preference number: 6 (lower is better)
Translates to: SFCVSSLGRLST*VNLKSTFTLFI
Trigger: GATGAACAAAGTGAAGGTGCTTTTTAAGTTCACCAAGGTGGACAGTCGACCCAAAGAGGACACACAGAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000285071.9
CDS CAA 72 bp TGGGAGGTCAGGGAACCACTGCCCTTCATGGAAAACTaGGGACGAACTGAAACAGAACACTTTATTTGTAAA +
Preference number: 6 (lower is better)
Translates to: WEVREPLPFMEN*GRTETEHFICK
Trigger: TTTACAAATAAAGTGTTCTGTTTCAGTTCGTCCCAAGTTTTCCATGAAGGGCAGTGGTTCCCTGACCTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466317.1
CDS CCA 72 bp TGGGAAGCATTATTAATGACATGTGGTGTGGAACAATaGTCGTACCACAGACCTGTAGCACCAAGATCAAAT +
Preference number: 6 (lower is better)
Translates to: WEALLMTCGVEQ*SYHRPVAPRSN
Trigger: ATTTGATCTTGGTGCTACAGGTCTGTGGTACGACCATTGTTCCACACCACATGTCATTAATAATGCTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466317.1