RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FKTN (Homo sapiens)

Ensembl gene IDs: ENSG00000106692

Ensembl transcript IDs: ENST00000223528.6, ENST00000357998.10, ENST00000374705.5, ENST00000448551.6, ENST00000457847.1, ENST00000490134.1, ENST00000602526.1, ENST00000602661.6, ENST00000642177.1, ENST00000642537.1, ENST00000642644.1, ENST00000642952.1, ENST00000644273.1, ENST00000645933.1, ENST00000674563.1, ENST00000674633.1, ENST00000674767.1, ENST00000675232.1, ENST00000675443.1, ENST00000675668.1, ENST00000675695.1, ENST00000675736.1, ENST00000676192.1, ENST00000676310.1, ENST00000676371.1

Found 1905 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCAGAGGAGAGAAGGACAAGTGCTCCCTGCTTAGAGAGGACTGGGTaGCTACCTGGTTGTCCTGGTTATCAATTAAGAGGAATCTTGCCT +
Preference number: 1 (lower is better)
Translates to: AEERRTSAPCLERTG*LPGCPGYQLRGILP
Trigger: AGGCAAGATTCCTCTTAATTGATAACCAGGACAACCAGGTAGTCACCCAGTCCTCTCTAAGCAGGGAGCACTTGTCCTTCTCTCCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR GCA 90 bp AAGAGGAATCTTGCCTCTCAGGATGTCTCTGGAGACATTCATGGGTaGCTAACTACCAACAAGTTGTCAACTTCCCCAGGTAAGCCAGGT +
Preference number: 1 (lower is better)
Translates to: KRNLASQDVSGDIHG*LTTNKLSTSPGKPG
Trigger: ACCTGGCTTACCTGGGGAAGTTGACAACTTGTTGGTAGTTAGGCACCCATGAATGTCTCCAGAGACATCCTGAGAGGCAAGATTCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR GCA 90 bp AGTGCAAGGGTGGAGGAGAGGGCAGCCCAGACAAATACAACTGTGTaGTTTGAACATGGGAATAGTATGTTTAGTCACAGGTCGCAAGAC +
Preference number: 1 (lower is better)
Translates to: SARVEERAAQTNTTV*FEHGNSMFSHRSQD
Trigger: GTCTTGCGACCTGTGACTAAACATACTATTCCCATGTTCAAAGCACACAGTTGTATTTGTCTGGGCTGCCCTCTCCTCCACCCTTGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676310.1
3UTR CCA 90 bp TGCAGCAGAGGAGAGAAGGACAAGTGCTCCCTGCTTAGAGAGGACTaGGTGACTACCTGGTTGTCCTGGTTATCAATTAAGAGGAATCTT +
Preference number: 1 (lower is better)
Translates to: CSRGEKDKCSLLRED*VTTWLSWLSIKRNL
Trigger: AAGATTCCTCTTAATTGATAACCAGGACAACCAGGTAGTCACCCAGTCCTCTCTAAGCAGGGAGCACTTGTCCTTCTCTCCTCTGCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR CCA 90 bp AGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATCGCATGAGTaGCCAGTTTGCAGATATAGTGCAGGGGGATTTCAGTTCCAGAGA +
Preference number: 1 (lower is better)
Translates to: SCHSSHERLPSGSHE*PVCRYSAGGFQFQR
Trigger: TCTCTGGAACTGAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
3UTR CCA 90 bp ATGGACCTAGGGAATAGCCCTATCCAGGCCCTGGAAAAGGGTTCATaGTCATTTGAACAGAAATTCAGGGGTCCCAGGTTCCCAGAATAT +
Preference number: 1 (lower is better)
Translates to: MDLGNSPIQALEKGS*SFEQKFRGPRFPEY
Trigger: ATATTCTGGGAACCTGGGACCCCTGAATTTCTGTTCAAATGACCATGAACCCTTTTCCAGGGCCTGGATAGGGCTATTCCCTAGGTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676310.1
3UTR TCA 90 bp TCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTAGGCACTaGAATCCCATATTCTCAGCTATCCGAAACCAGCCTTCCCCTGTA +
Preference number: 1 (lower is better)
Translates to: SIPSSRGSLLSIFRH*NPIFSAIRNQPSPV
Trigger: TACAGGGGAAGGCTGGTTTCGGATAGCTGAGAATATGGGATTTCAGTGCCTAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675232.1
3UTR GCA 90 bp TCCTCTCATGAAAGACTACCAAGTGGATCGCATGAGTGGCCAGTTTaGAGATATAGTGCAGGGGGATTTCAGTTCCAGAGAGTGAGTCTA +
Preference number: 1 (lower is better)
Translates to: SSHERLPSGSHEWPV*RYSAGGFQFQRVSL
Trigger: TAGACTCACTCTCTGGAACTGAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTCTTTCATGAGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
3UTR TCA 90 bp TCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTAGGCACTaGAATCCCATATTCTCAGCTATCCGAAACCAGCCTTCCTCATTC +
Preference number: 1 (lower is better)
Translates to: SIPSSRGSLLSIFRH*NPIFSAIRNQPSSF
Trigger: GAATGAGGAAGGCTGGTTTCGGATAGCTGAGAATATGGGATTTCAGTGCCTAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000374705.5
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000676192.1
ENST00000676371.1
3UTR TCA 90 bp TCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTAGGCACTaGAATCCCATATTCTCAGCTATCCGAAACCAGCCTTCCTGTAGT +
Preference number: 1 (lower is better)
Translates to: SIPSSRGSLLSIFRH*NPIFSAIRNQPSCS
Trigger: ACTACAGGAAGGCTGGTTTCGGATAGCTGAGAATATGGGATTTCAGTGCCTAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602526.1
3UTR TCA 90 bp CTTTTTATTCATGAGGCTGGCTGCATAAATTTCACAGCTCCACAATaGCTTAAGGAAATAGGGCTACGAAGGCCCACTTGGGCTGTCAGG +
Preference number: 1 (lower is better)
Translates to: LFIHEAGCINFTAPQ*LKEIGLRRPTWAVR
Trigger: CCTGACAGCCCAAGTGGGCCTTCGTAGCCCTATTTCCTTAAGTCATTGTGGAGCTGTGAAATTTATGCAGCCAGCCTCATGAATAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
3UTR CCA 90 bp TCCAGTCCCACGTCTTTACAGGAATCTTCCAGGTCTTACCATAGTTaGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCA +
Preference number: 1 (lower is better)
Translates to: SSPTSLQESSRSYHS*LQCIRGFHRVHGPS
Trigger: TGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCAACTATGGTAAGACCTGGAAGATTCCTGTAAAGACGTGGGACTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR CCA 90 bp AAGGGTGGTAAAGACTGGGTAGGAATTATAATACAAGTGCAAGGGTaGAGGAGAGGGCAGCCCAGACAAATACAACTGTGTGCTTTGAAC +
Preference number: 1 (lower is better)
Translates to: KGGKDWVGIIIQVQG*RRGQPRQIQLCALN
Trigger: GTTCAAAGCACACAGTTGTATTTGTCTGGGCTGCCCTCTCCTCCACCCTTGCACTTGTATTATAATTCCTACCCAGTCTTTACCACCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676310.1
3UTR CCA 90 bp ATTCTCTCTCTCAGAACTGAGAATAGACCAGCTGTATCATCAACTTaGACTGACAAACCCAGGGACACTTCCTCCTCACAAACCGTCCTT +
Preference number: 1 (lower is better)
Translates to: ILSLRTENRPAVSST*TDKPRDTSSSQTVL
Trigger: AAGGACGGTTTGTGAGGAGGAAGTGTCCCTGGGTTTGTCAGTCCAAGTTGATGATACAGCTGGTCTATTCTCAGTTCTGAGAGAGAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675668.1
3UTR TCA 90 bp CCTTCTCTGTTAAGCATCTCAAGCACTGTTAAAGATACTGTGTTGTaGTGCGAAACAGACATTGGACTAGGAGTCACGGCAGTCTTGGGT +
Preference number: 1 (lower is better)
Translates to: PSLLSISSTVKDTVL*CETDIGLGVTAVLG
Trigger: ACCCAAGACTGCCGTGACTCCTAGTCCAATGTCTGTTTCGCATCACAACACAGTATCTTTAACAGTGCTTGAGATGCTTAACAGAGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR TCA 90 bp AAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTCCATTCTTaGGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGC +
Preference number: 1 (lower is better)
Translates to: KSLPAHSLRHSGFHS*DYYCSLVSEENLPS
Trigger: GCTTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR GCA 90 bp AGCCAGAATGGTACTCCCAATTTGTTTAATGTTTTCGCTGCTAGTTaGAGTAATTCCTTTGCACTCTTCCGAAAGGCCACAGCTTCCACA +
Preference number: 1 (lower is better)
Translates to: SQNGTPNLFNVFAAS*SNSFALFRKATAST
Trigger: TGTGGAAGCTGTGGCCTTTCGGAAGAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAACATTAAACAAATTGGGAGTACCATTCTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
3UTR CCA 90 bp CCCTCAGACATTCAGGTTTCCATTCTTGAGACTACTATTGTTCTCTaGTGTCAGAGGAAAATCTGCCAAGCTCCAGAAAGTAGTCCTAAA +
Preference number: 1 (lower is better)
Translates to: PSDIQVSILETTIVL*CQRKICQAPESSPK
Trigger: TTTAGGACTACTTTCTGGAGCTTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAACCTGAATGTCTGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR CCA 90 bp GCAGCCAGTGGTCTATGTAGGGAAGAATATAGAACCTGTGTCAATTaGGCCAAGATGTCTTGGATTTCAGACACTCTTAAGACTTTGTAC +
Preference number: 1 (lower is better)
Translates to: AASGLCREEYRTCVN*AKMSWISDTLKTLY
Trigger: GTACAAAGTCTTAAGAGTGTCTGAAATCCAAGACATCTTGGCCCAATTGACACAGGTTCTATATTCTTCCCTACATAGACCACTGGCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR CCA 90 bp AGGTGCCAGTACACTGTATTAGAGAAACCTCAGATTTGTGGGTCTTaGGCACTTGACAGTTATATACTTCATTTTCGTATCCCTCGTGGA +
Preference number: 1 (lower is better)
Translates to: RCQYTVLEKPQICGS*ALDSYILHFRIPRG
Trigger: TCCACGAGGGATACGAAAATGAAGTATATAACTGTCAAGTGCCCAAGACCCACAAATCTGAGGTTTCTCTAATACAGTGTACTGGCACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
3UTR CCA 90 bp ATACTTTATCCTGCACAGGGTTTCACACGTGTGCATAAAGACATATaGACAGAGATAGTGACTGCAGAACTGAGGGTCACAGTAAACTAC +
Preference number: 1 (lower is better)
Translates to: ILYPAQGFTRVHKDI*TEIVTAELRVTVNY
Trigger: GTAGTTTACTGTGACCCTCAGTTCTGCAGTCACTATCTCTGTCCATATGTCTTTATGCACACGTGTGAAACCCTGTGCAGGATAAAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675668.1
3UTR TCA 90 bp AATTGGAAATGGGGAGAAATGTGGAGTGTATGCATTTCTAAATACTaGGCACAAGCAAATGGTCCTCATCAAGTAGGGTGGATTTTGCCC +
Preference number: 1 (lower is better)
Translates to: NWKWGEMWSVCISKY*AQANGPHQVGWILP
Trigger: GGGCAAAATCCACCCTACTTGATGAGGACCATTTGCTTGTGCTCAGTATTTAGAAATGCATACACTCCACATTTCTCCCCATTTCCAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR TCA 90 bp GTACACTGTATTAGAGAAACCTCAGATTTGTGGGTCTTGGGCACTTaGCAGTTATATACTTCATTTTCGTATCCCTCGTGGACACAGCTT +
Preference number: 1 (lower is better)
Translates to: VHCIRETSDLWVLGT*QLYTSFSYPSWTQL
Trigger: AAGCTGTGTCCACGAGGGATACGAAAATGAAGTATATAACTGTCAAGTGCCCAAGACCCACAAATCTGAGGTTTCTCTAATACAGTGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
3UTR CCA 90 bp GTCCAGCACAGTGTAAACTTCGGAAACAGGTATCTTTCAAACTTCTaGCTTCTACCCATACCAGTTGATTCAAAATGGGAAGGAAAGAAG +
Preference number: 1 (lower is better)
Translates to: VQHSVNFGNRYLSNF*LLPIPVDSKWEGKK
Trigger: CTTCTTTCCTTCCCATTTTGAATCAACTGGTATGGGTAGAAGCCAGAAGTTTGAAAGATACCTGTTTCCGAAGTTTACACTGTGCTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR TCA 90 bp ACTGAAAAACTGGGGAGGGACACAAACTTTACAAACTCTATGATCTaGGGTAGGGTGAATAGTTGTCAAGTCCACCATTTAGCTTCCATT +
Preference number: 1 (lower is better)
Translates to: TEKLGRDTNFTNSMI*GRVNSCQVHHLASI
Trigger: AATGGAAGCTAAATGGTGGACTTGACAACTATTCACCCTACCTCAGATCATAGAGTTTGTAAAGTTTGTGTCCCTCCCCAGTTTTTCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR TCA 90 bp ACACTCTTAAGACTTTGTACTTCAGGAAAGGATAAAAGATTAATCTaGAAAGGGATGGGTAAGATCTCCTGGCAAAGAATGGGAGTCCCA +
Preference number: 1 (lower is better)
Translates to: TLLRLCTSGKDKRLI*KGMGKISWQRMGVP
Trigger: TGGGACTCCCATTCTTTGCCAGGAGATCTTACCCATCCCTTTTCAGATTAATCTTTTATCCTTTCCTGAAGTACAAAGTCTTAAGAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR TCA 90 bp CAGGTATCTGTCTTATCCTATCAAGTTGACACAATGAAGTTGAATTaGGGCAGAACTCATGGTCTATCTTGTAATACAGGCCAGGAAACT +
Preference number: 1 (lower is better)
Translates to: QVSVLSYQVDTMKLN*GRTHGLSCNTGQET
Trigger: AGTTTCCTGGCCTGTATTACAAGATAGACCATGAGTTCTGCCTCAATTCAACTTCATTGTGTCAACTTGATAGGATAAGACAGATACCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642177.1
ENST00000642537.1
ENST00000644273.1
3UTR CCA 90 bp AGTTTTGTGAAATCATGGCCTCTTTCAAGATCATGTCTAGTAACATaGTCTCACTTGAATGATTTGTCAACAAGTGCCATCAGAGGTCAG +
Preference number: 1 (lower is better)
Translates to: SFVKSWPLSRSCLVT*SHLNDLSTSAIRGQ
Trigger: CTGACCTCTGATGGCACTTGTTGACAAATCATTCAAGTGAGACCATGTTACTAGACATGATCTTGAAAGAGGCCATGATTTCACAAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR CCA 90 bp ACACTCAATAAACCTAGAGTGTGGTACTTCTTCTACAAAGTGCATTaGATCCTTTGGAATGAGAACTTCCAGTCCATCAACAGTAACTTG +
Preference number: 1 (lower is better)
Translates to: TLNKPRVWYFFYKVH*ILWNENFQSINSNL
Trigger: CAAGTTACTGTTGATGGACTGGAAGTTCTCATTCCAAAGGATCCAATGCACTTTGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
3UTR CCA 90 bp GAATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTaGTACTTCTTCTACAAAGTGCATTGGATCCTTTGGAATGAGAAC +
Preference number: 1 (lower is better)
Translates to: ECSSFFIPTLNKPRV*YFFYKVHWILWNEN
Trigger: GTTCTCATTCCAAAGGATCCAATGCACTTTGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
3UTR CCA 90 bp GTTATTCAGTTACACTTGCCACATTTCAAATATTCAGTAGTCATGTaGCTAGTGGCTACAGATACATCATTTGCAGCATCACACCATGCT +
Preference number: 1 (lower is better)
Translates to: VIQLHLPHFKYSVVM*LVATDTSFAASHHA
Trigger: AGCATGGTGTGATGCTGCAAATGATGTATCTGTAGCCACTAGCCACATGACTACTGAATATTTGAAATGTGGCAAGTGTAACTGAATAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674633.1
3UTR TCA 90 bp ATGGCCTCTTTCAAGATCATGTCTAGTAACATGGTCTCACTTGAATaGTTTGTCAACAAGTGCCATCAGAGGTCAGTGAAAATATTCTCA +
Preference number: 1 (lower is better)
Translates to: MASFKIMSSNMVSLE*FVNKCHQRSVKIFS
Trigger: TGAGAATATTTTCACTGACCTCTGATGGCACTTGTTGACAAATCATTCAAGTGAGACCATGTTACTAGACATGATCTTGAAAGAGGCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR CCA 90 bp GTGAAGTACAGTAAACTGCTTGGGACCAGCAAACTAGGTAGCATATaGGATAATATTAGGAGACAACTGCTTAACCAAGAAAATGAAAAT +
Preference number: 1 (lower is better)
Translates to: VKYSKLLGTSKLGSI*DNIRRQLLNQENEN
Trigger: ATTTTCATTTTCTTGGTTAAGCAGTTGTCTCCTAATATTATCCCATATGCTACCTAGTTTGCTGGTCCCAAGCAGTTTACTGTACTTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR TCA 90 bp GTATTAGTAACAGCAGGTAATAATTACTTAGCACCCAGGACCTCCTaGCACACCTCAAAGCTCTTTTTGTGTATTAATTCTTTTAATCCT +
Preference number: 1 (lower is better)
Translates to: VLVTAGNNYLAPRTS*HTSKLFLCINSFNP
Trigger: AGGATTAAAAGAATTAATACACAAAAAGAGCTTTGAGGTGTGTCAGGAGGTCCTGGGTGCTAAGTAATTATTACCTGCTGTTACTAATAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675668.1
3UTR GCA 90 bp AAAAAGAAAGGCGGCTGCTTGATGAGGTCTATTAGATTAATTTATTaGTTTACACCAAGCATTACATTTAAGACTGTTTGGCGCCATCAA +
Preference number: 1 (lower is better)
Translates to: KKKGGCLMRSIRLIY*FTPSITFKTVWRHQ
Trigger: TTGATGGCGCCAAACAGTCTTAAATGTAATGCTTGGTGTAAAGCAATAAATTAATCTAATAGACCTCATCAAGCAGCCGCCTTTCTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
3UTR-3UTR TCA 90 bp GCTCTGACATTTGTGGGGGCCATGATAAGGGTACAAATGGAGACTCCATCCCCGGGAGCCCGATTGTGTTaGCATCCTGGGACCAGGGTT +
Preference number: 2 (lower is better)
Translates to: ALTFVGAMIRVQMETPSPGARLC*HPGTRV
Trigger: AACCCTGGTCCCAGGATGTCAACACAATCGGGCTCC...CGGGGATGGAGTCTCCATTTGTACCCTTATCATGGCCCCCACAAATGTCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676310.1
3UTR-3UTR TCA 90 bp GCTCTGACATTTGTGGGGGCCATGATAAGGGTACAAATGGAGACTCCATCCCCGCTGAGGTCAGGGGCTTaGGACCAACCTGGCCAACAT +
Preference number: 2 (lower is better)
Translates to: ALTFVGAMIRVQMETPSPLRSGA*DQPGQH
Trigger: ATGTTGGCCAGGTTGGTCTCAAGCCCCTGACCTCAG...CGGGGATGGAGTCTCCATTTGTACCCTTATCATGGCCCCCACAAATGTCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676310.1
3UTR-3UTR CCA 90 bp AAGTCACTGAGACTTTGGGGTTGTTTGTCACACCGCCACCCACCTTACCCACCTCTGCTGGGTGCCTGGTaGAAGGGTGGTAAAGACTGG +
Preference number: 2 (lower is better)
Translates to: KSLRLWGCLSHRHPPYPPLLGAW*KGGKDW
Trigger: CCAGTCTTTACCACCCTTCCACCAGGCACCCAGCAG...AGGTGGGTAAGGTGGGTGGCGGTGTGACAAACAACCCCAAAGTCTCAGTGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676310.1
3UTR-3UTR TCA 90 bp AGGCCAGATTCCATTGGGTTGCACATTGGGAGGAGAGCGCTTCCAGTCCCACGTCTTAGCTTTGCCTGGTaGGCTCATCTTCCAGTTCAA +
Preference number: 2 (lower is better)
Translates to: RPDSIGLHIGRRALPVPRLSFAW*AHLPVQ
Trigger: TTGAACTGGAAGATGAGCTCACCAGGCAAAGCTAAG...ACGTGGGACTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATGGAATCTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR GCA 90 bp GCAGGGGGATTTCAGTTCCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTCGTGCCAGAGGTAGTTaGCACTCCTCTCATGAAAGA +
Preference number: 2 (lower is better)
Translates to: AGGFQFQRVSLSRLAGDLRARGS*HSSHER
Trigger: TCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACG...AAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAACTGAAATCCCCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
3UTR-3UTR TCA 90 bp GCTACGAAGGCCCACTTGGGCTGTCAGGCCTCAGCTTTAGGTGCCAGTACACTGTTGGATCCTTTGGAATaGGAACTTCCAGTCCATCAA +
Preference number: 2 (lower is better)
Translates to: ATKAHLGCQASALGASTLLDPLE*ELPVHQ
Trigger: TTGATGGACTGGAAGTTCTCATTCCAAAGGATCCAA...CAGTGTACTGGCACCTAAAGCTGAGGCCTGACAGCCCAAGTGGGCCTTCGTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
3UTR-3UTR TCA 90 bp GCTACGAAGGCCCACTTGGGCTGTCAGGCCTCAGCTTTAGGTGCCAGTACACTGTTCACAGCTCCACAATaGCTTAAGGAAATAGGGCTA +
Preference number: 2 (lower is better)
Translates to: ATKAHLGCQASALGASTLFTAPQ*LKEIGL
Trigger: TAGCCCTATTTCCTTAAGTCATTGTGGAGCTGTGAA...CAGTGTACTGGCACCTAAAGCTGAGGCCTGACAGCCCAAGTGGGCCTTCGTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
3UTR-3UTR CCA 90 bp CTAAGCGGCAGAAACACCCTGAGACTTAGCCTCAATGAAGCACTGGATGCCTTCCATTGGGTTGCACATTaGGAGGAGAGCGCTTCCAGT +
Preference number: 2 (lower is better)
Translates to: LSGRNTLRLSLNEALDAFHWVAH*EESASS
Trigger: ACTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATG...GAAGGCATCCAGTGCTTCATTGAGGCTAAGTCTCAGGGTGTTTCTGCCGCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp ATGGACCTAGGGAATAGCCCTATCCAGGCCCTGGAAAAGGGTTCATGGTCATTTATACAAGTGCAAGGGTaGAGGAGAGGGCAGCCCAGA +
Preference number: 2 (lower is better)
Translates to: MDLGNSPIQALEKGSWSFIQVQG*RRGQPR
Trigger: TCTGGGCTGCCCTCTCCTCCACCCTTGCACTTGTAT...AAATGACCATGAACCCTTTTCCAGGGCCTGGATAGGGCTATTCCCTAGGTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676310.1
3UTR CAA 90 bp ACCTCATCCCACTCAGAAATAGGCCAGATTCCATTGGGTTGCACATaGGGAGGAGAGCGCTTCCAGTCCCACGTCTTTACAGGAATCTTC +
Preference number: 2 (lower is better)
Translates to: TSSHSEIGQIPLGCT*GGERFQSHVFTGIF
Trigger: GAAGATTCCTGTAAAGACGTGGGACTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATGGAATCTGGCCTATTTCTGAGTGGGATGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp GCCTGGCCTTCAGATTCTAGAGAAGGCTTTTGTTTCCCCAAGTTAGGGTGGAACTTAGAGAGGACTGGGTaGCTACCTGGTTGTCCTGGT +
Preference number: 2 (lower is better)
Translates to: AWPSDSREGFCFPKLGWNLERTG*LPGCPG
Trigger: ACCAGGACAACCAGGTAGTCACCCAGTCCTCTCTAA...GTTCCACCCTAACTTGGGGAAACAAAAGCCTTCTCTAGAATCTGAAGGCCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp GTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATTTGCCACTCCTCTCATaGAAGACTACCAAGTGGATC +
Preference number: 2 (lower is better)
Translates to: VAVPEVVATPLMKDYQVDLPLLS*KTTKWI
Trigger: GATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAA...ATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
3UTR-3UTR GCA 90 bp GCTACGAAGGCCCACTTGGGCTGTCAGGCCTCAGCTTTAGGTGCCAGTACACTGATACTGCAGTGCAAATaGAGTAAAGTCTCTTGGAAC +
Preference number: 2 (lower is better)
Translates to: ATKAHLGCQASALGASTLILQCK*SKVSWN
Trigger: GTTCCAAGAGACTTTACTGCATTTGCACTGCAGTAT...CAGTGTACTGGCACCTAAAGCTGAGGCCTGACAGCCCAAGTGGGCCTTCGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675232.1
ENST00000676192.1
3UTR-3UTR GCA 90 bp TCAGTTCCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCAGTGAGCCAAGATTGTaGCACTGCACTCAAGCCTGG +
Preference number: 2 (lower is better)
Translates to: SVPESESIPSSRGSLLSISEPRL*HCTQAW
Trigger: CCAGGCTTGAGTGCAGTGGCACAATCTTGGCTCACT...GATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602526.1
3UTR-3UTR GCA 90 bp GCTCTGACATTTGTGGGGGCCATGATAAGGGTACAAATGGAGACTCCATCCCCGCAAATAGGATCTGTGTaGGAGTGGACAAGGACTCAG +
Preference number: 2 (lower is better)
Translates to: ALTFVGAMIRVQMETPSPQIGSV*EWTRTQ
Trigger: CTGAGTCCTTGTCCACTCGCACACAGATCCTATTTG...CGGGGATGGAGTCTCCATTTGTACCCTTATCATGGCCCCCACAAATGTCAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676310.1
3UTR-3UTR CCA 90 bp ATAATAGAGATGACAACCACAGCAAACTCCCTTAGGACAGGAAGAGCGGTCAAGCTACGAAGGCCCACTTaGGCTGTCAGGCCTCAGCTT +
Preference number: 2 (lower is better)
Translates to: IIEMTTTANSLRTGRAVKLRRPT*AVRPQL
Trigger: AAGCTGAGGCCTGACAGCCCAAGTGGGCCTTCGTAG...CTTGACCGCTCTTCCTGTCCTAAGGGAGTTTGCTGTGGTTGTCATCTCTATTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
3UTR-3UTR TCA 90 bp CTAAGCGGCAGAAACACCCTGAGACTTAGCCTCAATGAAGCACTGGATGCCTTCCTTAGCTTTGCCTGGTaGGCTCATCTTCCAGTTCAA +
Preference number: 2 (lower is better)
Translates to: LSGRNTLRLSLNEALDAFLSFAW*AHLPVQ
Trigger: TTGAACTGGAAGATGAGCTCACCAGGCAAAGCTAAG...GAAGGCATCCAGTGCTTCATTGAGGCTAAGTCTCAGGGTGTTTCTGCCGCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp CTAGCCCAGGTCTTAATGATAGTGGAAGACAAGGAGGAAAGAGGGAACGTTGCTTTAGAGAGGACTGGGTaGCTACCTGGTTGTCCTGGT +
Preference number: 2 (lower is better)
Translates to: LAQVLMIVEDKEERGNVALERTG*LPGCPG
Trigger: ACCAGGACAACCAGGTAGTCACCCAGTCCTCTCTAA...AGCAACGTTCCCTCTTTCCTCCTTGTCTTCCACTATCATTAAGACCTGGGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp TCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTCAGTTCCAGAGAGCCTGGGTGACAAAGTaGGACCCTCATTCTTCCATA +
Preference number: 2 (lower is better)
Translates to: SHEWPVCRYSAGGFQFQRAWVTK*DPHSSI
Trigger: TATGGAAGAATGAGGGTCTCACTTTGTCACCCAGGC...TCTCTGGAACTGAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602526.1
3UTR-3UTR GCA 90 bp CTAGCCCAGGTCTTAATGATAGTGGAAGACAAGGAGGAAAGAGGGAACGTTGCTGCTCACTGCAGACTCTaGTTCCCGGGTTCAAGTGAT +
Preference number: 2 (lower is better)
Translates to: LAQVLMIVEDKEERGNVAAHCRL*FPGSSD
Trigger: ATCACTTGAACCCGGGAAGCAGAGTCTGCAGTGAGC...AGCAACGTTCCCTCTTTCCTCCTTGTCTTCCACTATCATTAAGACCTGGGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
3UTR-3UTR GCA 90 bp CAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTCAGTCATGAGTGGCCAGTTTaGAGATATAGTGCAGGGGGA +
Preference number: 2 (lower is better)
Translates to: QVDRMSGQFADIVQGDFSHEWPV*RYSAGG
Trigger: TCCCCCTGCACTATATCTGCAAACTGGCCACTCATG...ACTGAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
3UTR-3UTR CCA 90 bp GTTGGGTTAGAAGGTGCCAGGGGGTATTCTAGGGTAGAAGTTTTGATAGTACGGGAACTCTTCAAAGGGTaGGGGAGGGTTCCCTCAAAG +
Preference number: 2 (lower is better)
Translates to: VGLEGARGYSRVEVLIVRELFKG*GRVPSK
Trigger: CTTTGAGGGAACCCTCCCCCACCCTTTGAAGAGTTC...CCGTACTATCAAAACTTCTACCCTAGAATACCCCCTGGCACCTTCTAACCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000675695.1
3UTR-3UTR CCA 90 bp TTTTTCTGTGAAGGGCCTTGTGAAAATGATGCGAACTCCCAGCCCACATGGACCGGATCTGTGTGCGAGTaGACAAGGACTCAGAGAAAG +
Preference number: 2 (lower is better)
Translates to: FFCEGPCENDANSQPTWTGSVCE*TRTQRK
Trigger: CTTTCTCTGAGTCCTTGTCCACTCGCACACAGATCC...GGTCCATGTGGGCTGGGAGTTCGCATCATTTTCACAAGGCCCTTCACAGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676310.1
3UTR-3UTR TCA 90 bp TGCACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTGCTGAACCTGTACAGAACTTaGACTCTTCAAAGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: CTLPKGHSFHSVIIKVLLNLYRT*TLQRVG
Trigger: CCCCACCCTTTGAAGAGTTCAAGTTCTGTACAGGTT...CAGCAGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
3UTR-3UTR TCA 90 bp AGAGGAGAGAAGGACAAGTGCTCCCTGCTTAGAGAGGACTGGGTGACTACCTGGACAAACTCTATGATCTaGGGTAGGGTGAATAGTTGT +
Preference number: 2 (lower is better)
Translates to: RGEKDKCSLLREDWVTTWTNSMI*GRVNSC
Trigger: ACAACTATTCACCCTACCTCAGATCATAGAGTTTGT...CCAGGTAGTCACCCAGTCCTCTCTAAGCAGGGAGCACTTGTCCTTCTCTCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR GCA 90 bp GATCTAGCCCAGGTCTTAATGATAGTGGAAGACAAGGAGGAAAGAGGGAACGTTGGAGAGAAGGACAAGTaGTCCCTGCTTAGAGAGGAC +
Preference number: 2 (lower is better)
Translates to: DLAQVLMIVEDKEERGNVGEKDK*SLLRED
Trigger: GTCCTCTCTAAGCAGGGAGCACTTGTCCTTCTCTCC...AACGTTCCCTCTTTCCTCCTTGTCTTCCACTATCATTAAGACCTGGGCTAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR GCA 90 bp CTCTCAGGATGTCTCTGGAGACATTCATGGGTGCCTAACTACCAACAAGTTGTCCATGAGTGGCCAGTTTaGAGATATAGTGCAGGGGGA +
Preference number: 2 (lower is better)
Translates to: LSGCLWRHSWVPNYQQVVHEWPV*RYSAGG
Trigger: TCCCCCTGCACTATATCTGCAAACTGGCCACTCATG...GACAACTTGTTGGTAGTTAGGCACCCATGAATGTCTCCAGAGACATCCTGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
3UTR-3UTR GCA 90 bp TCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACAGTGTAAACCAGATTCCATTGGGTTaGACATTGGGAGGAGAGCGC +
Preference number: 2 (lower is better)
Translates to: SQGTWTFMSTNSVQHSVNQIPLG*TLGGER
Trigger: GCGCTCTCCTCCCAATGTGCAACCCAATGGAATCTG...GTTTACACTGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp GATCTAGCCCAGGTCTTAATGATAGTGGAAGACAAGGAGGAAAGAGGGAACGTTGAACTCTTCAAAGGGTaGGGGAGGGTTCCCTCAAAG +
Preference number: 2 (lower is better)
Translates to: DLAQVLMIVEDKEERGNVELFKG*GRVPSK
Trigger: CTTTGAGGGAACCCTCCCCCACCCTTTGAAGAGTTC...AACGTTCCCTCTTTCCTCCTTGTCTTCCACTATCATTAAGACCTGGGCTAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp GTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATCGCATGAGTGGATCGCATGAGTaGCCAGTTTGCAGATATAGT +
Preference number: 2 (lower is better)
Translates to: VPEVVATPLMKDYQVDRMSGSHE*PVCRYS
Trigger: ACTATATCTGCAAACTGGCCACTCATGCGATCCACT...CATGCGATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
3UTR-3UTR CCA 90 bp ATTCCATTGGGTTGCACATTGGGAGGAGAGCGCTTCCAGTCCCACGTCTTTACAGTGCATTGGATCCTTTaGAATGAGAACTTCCAGTCC +
Preference number: 2 (lower is better)
Translates to: IPLGCTLGGERFQSHVFTVHWIL*NENFQS
Trigger: GGACTGGAAGTTCTCATTCCAAAGGATCCAATGCAC...TGTAAAGACGTGGGACTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
3UTR-3UTR CCA 90 bp GTCCTGAATGCGAGAGAGTGTGAAATTAGAGTTAGGGACAGAAAGGTAGAAGATGTGGGACATAGGAGTTaGGTGAGCACTGGAGGAGGG +
Preference number: 2 (lower is better)
Translates to: VLNARECEIRVRDRKVEDVGHRS*VSTGGG
Trigger: CCCTCCTCCAGTGCTCACCCAACTCCTATGTCCCAC...ATCTTCTACCTTTCTGTCCCTAACTCTAATTTCACACTCTCTCGCATTCAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676310.1
3UTR CAA 90 bp CAAGGGTGGAGGAGAGGGCAGCCCAGACAAATACAACTGTGTGCTTaGAACATGGGAATAGTATGTTTAGTCACAGGTCGCAAGACTCAT +
Preference number: 2 (lower is better)
Translates to: QGWRRGQPRQIQLCA*NMGIVCLVTGRKTH
Trigger: ATGAGTCTTGCGACCTGTGACTAAACATACTATTCCCATGTTCAAAGCACACAGTTGTATTTGTCTGGGCTGCCCTCTCCTCCACCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676310.1
3UTR-3UTR TCA 90 bp TTGCACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTGCTCTTAGCTTTGCCTGGTaGGCTCATCTTCCAGTTCAA +
Preference number: 2 (lower is better)
Translates to: LHSSERPQLPQCYHQGTALSFAW*AHLPVQ
Trigger: TTGAACTGGAAGATGAGCTCACCAGGCAAAGCTAAG...AGCAGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
3UTR-3UTR TCA 90 bp CTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTGCTGAAAGAAACCAAGTGGATCGCATaGGTGGCCAGTTTGCAGATA +
Preference number: 2 (lower is better)
Translates to: LPKGHSFHSVIIKVLLKETKWIA*VASLQI
Trigger: TATCTGCAAACTGGCCACTCATGCGATCCACTTGGT...TTCTTTCAGCAGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
3UTR-3UTR TCA 90 bp CCTTTGCACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTTTGCCACTCCTCTCATaGAAGACTACCAAGTGGATC +
Preference number: 2 (lower is better)
Translates to: PLHSSERPQLPQCYHQGTLPLLS*KTTKWI
Trigger: GATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAA...AGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTGCAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
3UTR-3UTR GCA 90 bp GCCTGGCCTTCAGATTCTAGAGAAGGCTTTTGTTTCCCCAAGTTAGGGTGGAACAGAAGTCTGAGTTCTTaGCCCATCGACATTCAACAG +
Preference number: 2 (lower is better)
Translates to: AWPSDSREGFCFPKLGWNRSLSS*PIDIQQ
Trigger: CTGTTGAATGTCGATGGGGCAAGAACTCAGACTTCT...GTTCCACCCTAACTTGGGGAAACAAAAGCCTTCTCTAGAATCTGAAGGCCAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR GCA 90 bp GTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATATACTGCAGTGCAAATaGAGTAAAGTCTCTTGGAAC +
Preference number: 2 (lower is better)
Translates to: VAVPEVVATPLMKDYQVDILQCK*SKVSWN
Trigger: GTTCCAAGAGACTTTACTGCATTTGCACTGCAGTAT...ATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000676192.1
ENST00000676371.1
3UTR-3UTR GCA 90 bp CGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGTGCCATGAGTGGCCAGTTTaGAGATATAGTGCAGGGGGA +
Preference number: 2 (lower is better)
Translates to: RKGTNFLSMCSLSLKWPCHEWPV*RYSAGG
Trigger: TCCCCCTGCACTATATCTGCAAACTGGCCACTCATG...GCACGGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCCCTTCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
3UTR-3UTR GCA 90 bp GCAAACTCCCTTAGGACAGGAAGAGCGGTCAAGTTTAAGCACAAAACTCCATCTCGTGCCAGAGGTAGTTaGCACTCCTCTCATGAAAGA +
Preference number: 2 (lower is better)
Translates to: ANSLRTGRAVKFKHKTPSRARGS*HSSHER
Trigger: TCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACG...AGATGGAGTTTTGTGCTTAAACTTGACCGCTCTTCCTGTCCTAAGGGAGTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
3UTR-3UTR CCA 90 bp TGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAGAACTCTTCAAAGGGTaGGGGAGGGTTCCCTCAAAG +
Preference number: 2 (lower is better)
Translates to: WLQCIRGFHRVHGPSCLQELFKG*GRVPSK
Trigger: CTTTGAGGGAACCCTCCCCCACCCTTTGAAGAGTTC...TTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp CAGGTACCAAATCTAGTGAAGTACAGTAAACTGCTTGGGACCAGCAAACTAGGTCTGCTTAGAGAGGACTaGGTGACTACCTGGTTGTCC +
Preference number: 2 (lower is better)
Translates to: QVPNLVKYSKLLGTSKLGLLRED*VTTWLS
Trigger: GGACAACCAGGTAGTCACCCAGTCCTCTCTAAGCAG...ACCTAGTTTGCTGGTCCCAAGCAGTTTACTGTACTTCACTAGATTTGGTACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp AAGCAGCTTAAAATGGCATCATGCACCCTGCTGATTCTTGCCATAGTTGGCTTCTCTCATCAAAAAGCTTaGCCTCCCGAAGTGCTGGGA +
Preference number: 2 (lower is better)
Translates to: KQLKMASCTLLILAIVGFSHQKA*PPEVLG
Trigger: TCCCAGCACTTCGGGAGGCCAAGCTTTTTGATGAGA...GAAGCCAACTATGGCAAGAATCAGCAGGGTGCATGATGCCATTTTAAGCTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644273.1
3UTR-3UTR CCA 90 bp AGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATACCTTTCAAACTTCTaGCTTCTACCCATACCAGTT +
Preference number: 2 (lower is better)
Translates to: SGRARGSCHSSHERLPSGYLSNF*LLPIPV
Trigger: AACTGGTATGGGTAGAAGCCAGAAGTTTGAAAGGTA...TCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
3UTR CAA 90 bp CAGGATGTCTCTGGAGACATTCATGGGTGCCTAACTACCAACAAGTaGTCAACTTCCCCAGGTAAGCCAGGTAAACTAAACCTGAAAGTG +
Preference number: 2 (lower is better)
Translates to: QDVSGDIHGCLTTNK*STSPGKPGKLNLKV
Trigger: CACTTTCAGGTTTAGTTTACCTGGCTTACCTGGGGAAGTTGACAACTTGTTGGTAGTTAGGCACCCATGAATGTCTCCAGAGACATCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp CTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTGCTGAAAGAAAACCTGTACAGAACTTaGACTCTTCAAAGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: LPKGHSFHSVIIKVLLKENLYRT*TLQRVG
Trigger: CCCCACCCTTTGAAGAGTTCAAGTTCTGTACAGGTT...TTCTTTCAGCAGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
3UTR-3UTR TCA 90 bp CTAAGCGGCAGAAACACCCTGAGACTTAGCCTCAATGAAGCACTGGATGCCTTCATGGTCTCACTTGAATaGTTTGTCAACAAGTGCCAT +
Preference number: 2 (lower is better)
Translates to: LSGRNTLRLSLNEALDAFMVSLE*FVNKCH
Trigger: ATGGCACTTGTTGACAAATCATTCAAGTGAGACCAT...GAAGGCATCCAGTGCTTCATTGAGGCTAAGTCTCAGGGTGTTTCTGCCGCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp ATCAGCTGTCCCACCAAGCAGCTACTCTTAGGGATGCTCAATTTTAGGAACTATAAACAGCATCCTAGCTaGCTCAGACATCTTGAGGGG +
Preference number: 2 (lower is better)
Translates to: ISCPTKQLLLGMLNFRNYKQHPS*LRHLEG
Trigger: CCCCTCAAGATGTCTGAGTCAGCTAGGATGCTGTTT...ATAGTTCCTAAAATTGAGCATCCCTAAGAGTAGCTGCTTGGTGGGACAGCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp GTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATCGCATGTCAATCTTTAGGCACTaGAATCCCATATTCTCAGCT +
Preference number: 2 (lower is better)
Translates to: VPEVVATPLMKDYQVDRMSIFRH*NPIFSA
Trigger: AGCTGAGAATATGGGATTTCAGTGCCTAAAGATTGA...CATGCGATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000676192.1
ENST00000676371.1
3UTR-3UTR TCA 90 bp AGTAACATGATAGAAAATCTGGGACTCACACCATCTGTCCAGACAGTTCTATCAGCACCCAGGACCTCCTaGCACACCTCAAAGCTCTTT +
Preference number: 2 (lower is better)
Translates to: SNMIENLGLTPSVQTVLSAPRTS*HTSKLF
Trigger: AAAGAGCTTTGAGGTGTGTCAGGAGGTCCTGGGTGC...TGATAGAACTGTCTGGACAGATGGTGTGAGTCCCAGATTTTCTATCATGTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675668.1
3UTR-3UTR GCA 90 bp CTCTCAGGATGTCTCTGGAGACATTCATGGGTGCCTAACTACCAACAAGTTGTCAGAAGTCTGAGTTCTTaGCCCATCGACATTCAACAG +
Preference number: 2 (lower is better)
Translates to: LSGCLWRHSWVPNYQQVVRSLSS*PIDIQQ
Trigger: CTGTTGAATGTCGATGGGGCAAGAACTCAGACTTCT...GACAACTTGTTGGTAGTTAGGCACCCATGAATGTCTCCAGAGACATCCTGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR GCA 90 bp AGCTTGTGGTCTTTTTATGGCAACACATTGCCTTCCCTGAGTGAGATGTTAGAGCCAGATATCAGTAGCTaGAGCAGAGGAGAGAAGGAC +
Preference number: 2 (lower is better)
Translates to: SLWSFYGNTLPSLSEMLEPDISS*SRGEKD
Trigger: GTCCTTCTCTCCTCTGCTGCAGCTACTGATATCTGG...CTCTAACATCTCACTCAGGGAAGGCAATGTGTTGCCATAAAAAGACCACAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR GCA 90 bp CAAAATCATCTTTATATCCCCAGGGCCAGAAGCCTGCGGAACACAATAAATGTGCATGAGTGGCCAGTTTaGAGATATAGTGCAGGGGGA +
Preference number: 2 (lower is better)
Translates to: QNHLYIPRARSLRNTINVHEWPV*RYSAGG
Trigger: TCCCCCTGCACTATATCTGCAAACTGGCCACTCATG...CACATTTATTGTGTTCCGCAGGCTTCTGGCCCTGGGGATATAAAGATGATTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
3UTR-3UTR GCA 90 bp AGAAATAGGCCAGATTCCATTGGGTTGCACATTGGGAGGAGAGCGCTTCCAGTCGTACTGCTGAAAGAATaGTCGAGCTTCTTTATACCT +
Preference number: 2 (lower is better)
Translates to: RNRPDSIGLHIGRRALPVVLLKE*SSFFIP
Trigger: AGGTATAAAGAAGCTCGAGCATTCTTTCAGCAGTAC...GACTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATGGAATCTGGCCTATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
3UTR-3UTR GCA 90 bp GTATATCATGCTTACCTTTATCCTCAGAATACCCTAAATTCACAGAGCAAAACAGGCCTGTCCCTTACCTaGCACTACCAACCGGCCACC +
Preference number: 2 (lower is better)
Translates to: VYHAYLYPQNTLNSQSKTGLSLT*HYQPAT
Trigger: GGTGGCCGGTTGGTAGTGGCAGGTAAGGGACAGGCC...TGTTTTGCTCTGTGAATTTAGGGTATTCTGAGGATAAAGGTAAGCATGATATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674767.1
3UTR-3UTR GCA 90 bp CTAGGCTGTGGAGGGCTCTGGATTCCAGTCGACAAATCCAAAACCCTTGCTGATTACAGATACATCATTTaGAGCATCACACCATGCTCT +
Preference number: 2 (lower is better)
Translates to: LGCGGLWIPVDKSKTLADYRYII*SITPCS
Trigger: AGAGCATGGTGTGATGCTGCAAATGATGTATCTGTA...ATCAGCAAGGGTTTTGGATTTGTCGACTGGAATCCAGAGCCCTCCACAGCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674633.1
3UTR-3UTR CCA 90 bp GGGAGTCCCAATTGGAAATGGGGAGAAATGTGGAGTGTATGCATTTCTAAATACGAACTCTTCAAAGGGTaGGGGAGGGTTCCCTCAAAG +
Preference number: 2 (lower is better)
Translates to: GSPNWKWGEMWSVCISKYELFKG*GRVPSK
Trigger: CTTTGAGGGAACCCTCCCCCACCCTTTGAAGAGTTC...GTATTTAGAAATGCATACACTCCACATTTCTCCCCATTTCCAATTGGGACTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp CTGATGTCTCCAGATGTGAACTGTCTTATTGTCTGGAGAGAAGGCATTTTCCAGCTCTCAGGATGTCTCTaGAGACATTCATGGGTGCCT +
Preference number: 2 (lower is better)
Translates to: LMSPDVNCLIVWREGIFQLSGCL*RHSWVP
Trigger: AGGCACCCATGAATGTCTCCAGAGACATCCTGAGAG...CTGGAAAATGCCTTCTCTCCAGACAATAAGACAGTTCACATCTGGAGACATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp TTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCAGTGCATTGGATCCTTTaGAATGAGAACTTCCAGTCC +
Preference number: 2 (lower is better)
Translates to: FEGFTGYMDLHVYKLSPAVHWIL*NENFQS
Trigger: GGACTGGAAGTTCTCATTCCAAAGGATCCAATGCAC...TGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp GGGAGTCCCAATTGGAAATGGGGAGAAATGTGGAGTGTATGCATTTCTAAATACCATTGGGTTGCACATTaGGAGGAGAGCGCTTCCAGT +
Preference number: 2 (lower is better)
Translates to: GSPNWKWGEMWSVCISKYHWVAH*EESASS
Trigger: ACTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATG...GTATTTAGAAATGCATACACTCCACATTTCTCCCCATTTCCAATTGGGACTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp TCACTGTATCTCTGTGTTTCATGTCATCTCTTAGAGCTGAACTTTCATGCCTTTCTACGAAGGCCCACTTaGGCTGTCAGGCCTCAGCTT +
Preference number: 2 (lower is better)
Translates to: SLYLCVSCHLLELNFHAFLRRPT*AVRPQL
Trigger: AAGCTGAGGCCTGACAGCCCAAGTGGGCCTTCGTAG...AAAGGCATGAAAGTTCAGCTCTAAGAGATGACATGAAACACAGAGATACAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
3UTR-3UTR CCA 90 bp AAGTCACTGAGACTTTGGGGTTGTTTGTCACACCGCCACCCACCTTACCCACCTCTGGAAAAGGGTTCATaGTCATTTGAACAGAAATTC +
Preference number: 2 (lower is better)
Translates to: KSLRLWGCLSHRHPPYPPLEKGS*SFEQKF
Trigger: GAATTTCTGTTCAAATGACCATGAACCCTTTTCCAG...AGGTGGGTAAGGTGGGTGGCGGTGTGACAAACAACCCCAAAGTCTCAGTGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676310.1
3UTR-3UTR TCA 90 bp AGAAATAGGCCAGATTCCATTGGGTTGCACATTGGGAGGAGAGCGCTTCCAGTCATTGTATGTGGCACATaGAAATTCCTCAGTACTAAG +
Preference number: 2 (lower is better)
Translates to: RNRPDSIGLHIGRRALPVIVCGT*KFLSTK
Trigger: CTTAGTACTGAGGAATTTTCATGTGCCACATACAAT...GACTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATGGAATCTGGCCTATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp AGAAATAGGCCAGATTCCATTGGGTTGCACATTGGGAGGAGAGCGCTTCCAGTCCAAAGTCTGATCACTTaGATATTAACTCAGACTCCA +
Preference number: 2 (lower is better)
Translates to: RNRPDSIGLHIGRRALPVQSLIT*ILTQTP
Trigger: TGGAGTCTGAGTTAATATTCAAGTGATCAGACTTTG...GACTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATGGAATCTGGCCTATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp TGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAGGTAAAGTAGAAGTCTaGGTTCTTGCCCCATCGACA +
Preference number: 2 (lower is better)
Translates to: WLQCIRGFHRVHGPSCLQGKVEV*VLAPST
Trigger: TGTCGATGGGGCAAGAACTCAGACTTCTACTTTACC...TTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp GCACTAACATACCAGCTTAAATGCCCAGAAGAGGAGTGGGTTATTCTTTTCAACAAACAGCATCCTAGCTaGCTCAGACATCTTGAGGGG +
Preference number: 2 (lower is better)
Translates to: ALTYQLKCPEEEWVILFNKQHPS*LRHLEG
Trigger: CCCCTCAAGATGTCTGAGTCAGCTAGGATGCTGTTT...GTTGAAAAGAATAACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGTTAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp GTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTAGGCACTGAATCATTCTTCCATAGGTaGTACTGCAGTGCAAATGCA +
Preference number: 2 (lower is better)
Translates to: VSLSRLAGDLYSQSLGTESFFHR*YCSANA
Trigger: TGCATTTGCACTGCAGTATCACCTATGGAAGAATGA...TTCAGTGCCTAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000676192.1
ENST00000676371.1
3UTR-3UTR TCA 90 bp TTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGACCAAGTGGATCGCATaGGTGGCCAGTTTGCAGATA +
Preference number: 2 (lower is better)
Translates to: FRKGTNFLSMCSLSLKWPTKWIA*VASLQI
Trigger: TATCTGCAAACTGGCCACTCATGCGATCCACTTGGT...CGGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCCCTTCCGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
3UTR-3UTR TCA 90 bp TGGGGGAATCTTCCAAAGAAACTACTCTACTCAGCCATCTCCTGTTCTTTTCTCATCATCAACTTGGACTaGCAAACCCAGGGACACTTC +
Preference number: 2 (lower is better)
Translates to: WGNLPKKLLYSAISCSFLIINLD*QTQGHF
Trigger: GAAGTGTCCCTGGGTTTGTCAGTCCAAGTTGATGAT...GAGAAAAGAACAGGAGATGGCTGAGTAGAGTAGTTTCTTTGGAAGATTCCCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675668.1
3UTR-3UTR GCA 90 bp AATTCCTTTGCACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGACATACCAGCTTAAATaGCCAGAAGAGGAGTGGGTT +
Preference number: 2 (lower is better)
Translates to: NSFALFRKATASTVLSSRTYQLK*PEEEWV
Trigger: AACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGT...CCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTGCAAAGGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
3UTR-3UTR GCA 90 bp AGAAATAGGCCAGATTCCATTGGGTTGCACATTGGGAGGAGAGCGCTTCCAGTCACTTCTTCTACAAAGTaGATTGGATCCTTTGGAATG +
Preference number: 2 (lower is better)
Translates to: RNRPDSIGLHIGRRALPVTSSTK*IGSFGM
Trigger: CATTCCAAAGGATCCAATGCACTTTGTAGAAGAAGT...GACTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATGGAATCTGGCCTATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
3UTR-3UTR CCA 90 bp AGCTTGTGGTCTTTTTATGGCAACACATTGCCTTCCCTGAGTGAGATGTTAGAGATGGGTAAGATCTCCTaGCAAAGAATGGGAGTCCCA +
Preference number: 2 (lower is better)
Translates to: SLWSFYGNTLPSLSEMLEMGKIS*QRMGVP
Trigger: TGGGACTCCCATTCTTTGCCAGGAGATCTTACCCAT...CTCTAACATCTCACTCAGGGAAGGCAATGTGTTGCCATAAAAAGACCACAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp GACCTCTCTGTCGCCTTAGGTTCTCAATCTGAACAAAAAGATACTAAGCGGCAGGACTGGGTGACTACCTaGTTGTCCTGGTTATCAATT +
Preference number: 2 (lower is better)
Translates to: DLSVALGSQSEQKDTKRQDWVTT*LSWLSI
Trigger: AATTGATAACCAGGACAACCAGGTAGTCACCCAGTC...CTGCCGCTTAGTATCTTTTTGTTCAGATTGAGAACCTAAGGCGACAGAGAGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp TGTCCCACCAAGCAGCTACTCTTAGGGATGCTCAATTTTAGGAACTATGGTTTTGAGTCACGGCAGTCTTaGGTTTTAGCCTCAGCTGTT +
Preference number: 2 (lower is better)
Translates to: CPTKQLLLGMLNFRNYGFESRQS*VLASAV
Trigger: AACAGCTGAGGCTAAAACCCAAGACTGCCGTGACTC...AAAACCATAGTTCCTAAAATTGAGCATCCCTAAGAGTAGCTGCTTGGTGGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp ACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTGCTGAAAGTGCATTGGATCCTTTaGAATGAGAACTTCCAGTCC +
Preference number: 2 (lower is better)
Translates to: TLPKGHSFHSVIIKVLLKVHWIL*NENFQS
Trigger: GGACTGGAAGTTCTCATTCCAAAGGATCCAATGCAC...TTTCAGCAGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
3UTR-3UTR CCA 90 bp GGGTTAGAAGGTGCCAGGGGGTATTCTAGGGTAGAAGTTTTGATAGTACGGAAGGATTCTTGCCATAGTTaGCTTCAATGTATTCGAGGG +
Preference number: 2 (lower is better)
Translates to: GLEGARGYSRVEVLIVRKDSCHS*LQCIRG
Trigger: CCCTCGAATACATTGAAGCCAACTATGGCAAGAATC...CTTCCGTACTATCAAAACTTCTACCCTAGAATACCCCCTGGCACCTTCTAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642952.1
ENST00000644273.1
3UTR CAA 90 bp AGCCCATTCCCTCAGACATTCAGGTTTCCATTCTTGAGACTACTATaGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGCTCCAGAAAGTA +
Preference number: 2 (lower is better)
Translates to: SPFPQTFRFPFLRLL*FSGVRGKSAKLQKV
Trigger: TACTTTCTGGAGCTTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAACCTGAATGTCTGAGGGAATGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp TGTCCCACCAAGCAGCTACTCTTAGGGATGCTCAATTTTAGGAACTATGGTTTTCTTAGCTTTGCCTGGTaGGCTCATCTTCCAGTTCAA +
Preference number: 2 (lower is better)
Translates to: CPTKQLLLGMLNFRNYGFLSFAW*AHLPVQ
Trigger: TTGAACTGGAAGATGAGCTCACCAGGCAAAGCTAAG...AAAACCATAGTTCCTAAAATTGAGCATCCCTAAGAGTAGCTGCTTGGTGGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp GTCTATGTAGGGAAGAATATAGAACCTGTGTCAATTGGGCCAAGATGTCTTGGAGGTAAAGTAGAAGTCTaGGTTCTTGCCCCATCGACA +
Preference number: 2 (lower is better)
Translates to: VYVGKNIEPVSIGPRCLGGKVEV*VLAPST
Trigger: TGTCGATGGGGCAAGAACTCAGACTTCTACTTTACC...TCCAAGACATCTTGGCCCAATTGACACAGGTTCTATATTCTTCCCTACATAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp TCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACAGTGTAAACCTGACTCAGACATCTTaGGGGGAAAAGGAAACTAAA +
Preference number: 2 (lower is better)
Translates to: SQGTWTFMSTNSVQHSVNLTQTS*GEKETK
Trigger: TTTAGTTTCCTTTTCCCCTCAAGATGTCTGAGTCAG...GTTTACACTGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp CTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTGCTGAAAGAATCATTCTTCCATAGGTaGTACTGCAGTGCAAATGCA +
Preference number: 2 (lower is better)
Translates to: LPKGHSFHSVIIKVLLKESFFHR*YCSANA
Trigger: TGCATTTGCACTGCAGTATCACCTATGGAAGAATGA...TTCTTTCAGCAGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000602526.1
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000676371.1
3UTR-3UTR TCA 90 bp ATTCCTTTGCACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTTTGGATCCTTTGGAATaGGAACTTCCAGTCCATCAA +
Preference number: 2 (lower is better)
Translates to: IPLHSSERPQLPQCYHQGLDPLE*ELPVHQ
Trigger: TTGATGGACTGGAAGTTCTCATTCCAAAGGATCCAA...ACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTGCAAAGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
3UTR-3UTR TCA 90 bp ATAATAGAGATGACAACCACAGCAAACTCCCTTAGGACAGGAAGAGCGGTCAAGTTGGATCCTTTGGAATaGGAACTTCCAGTCCATCAA +
Preference number: 2 (lower is better)
Translates to: IIEMTTTANSLRTGRAVKLDPLE*ELPVHQ
Trigger: TTGATGGACTGGAAGTTCTCATTCCAAAGGATCCAA...CTTGACCGCTCTTCCTGTCCTAAGGGAGTTTGCTGTGGTTGTCATCTCTATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
3UTR-3UTR TCA 90 bp AATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTAGATCAAGGCTGCAGTaGGCCAAGATTGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: NARASLYLHSINLECGTSRSRLQ*AKIVPL
Trigger: CAGTGGCACAATCTTGGCTCACTGCAGCCTTGATCT...AGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602526.1
3UTR-3UTR TCA 90 bp GGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAATCATCAAGGTACTGCTaGAAGAATGCTCGAGCTTCT +
Preference number: 2 (lower is better)
Translates to: GFNVFEGFTGYMDLHVYKSSRYC*KNARAS
Trigger: AGAAGCTCGAGCATTCTTTCAGCAGTACCTTGATGA...TTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp ATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACAATGAAGTTGAATTaGGGCAGAACTCATGGTCTA +
Preference number: 2 (lower is better)
Translates to: IRGFHRVHGPSCLQTQSSTMKLN*GRTHGL
Trigger: TAGACCATGAGTTCTGCCTCAATTCAACTTCATTGT...GCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642177.1
ENST00000642537.1
ENST00000644273.1
3UTR-3UTR TCA 90 bp CTAGCCCAGGTCTTAATGATAGTGGAAGACAAGGAGGAAAGAGGGAACGTTGCTTCTACCCATACCAGTTaGTTCAAAATGGGAAGGAAA +
Preference number: 2 (lower is better)
Translates to: LAQVLMIVEDKEERGNVASTHTS*FKMGRK
Trigger: TTTCCTTCCCATTTTGAATCAACTGGTATGGGTAGA...AGCAACGTTCCCTCTTTCCTCCTTGTCTTCCACTATCATTAAGACCTGGGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR GCA 90 bp TGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAAGAAGTCTGAGTTCTTaGCCCATCGACATTCAACAG +
Preference number: 2 (lower is better)
Translates to: WLQCIRGFHRVHGPSCLQRSLSS*PIDIQQ
Trigger: CTGTTGAATGTCGATGGGGCAAGAACTCAGACTTCT...TTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR GCA 90 bp GGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAAAGAAGTCTGAGTTCTTaGCCCATCGACATTCAACAG +
Preference number: 2 (lower is better)
Translates to: GFNVFEGFTGYMDLHVYKRSLSS*PIDIQQ
Trigger: CTGTTGAATGTCGATGGGGCAAGAACTCAGACTTCT...TTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR GCA 90 bp AGGCCTGAGGCTAAGAACTGTATACTTCATTTAATCCCCCTAAAAACCCTTAGACCAGATATCAGTAGCTaGAGCAGAGGAGAGAAGGAC +
Preference number: 2 (lower is better)
Translates to: RPEAKNCILHLIPLKTLRPDISS*SRGEKD
Trigger: GTCCTTCTCTCCTCTGCTGCAGCTACTGATATCTGG...TCTAAGGGTTTTTAGGGGGATTAAATGAAGTATACAGTTCTTAGCCTCAGGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR GCA 90 bp AGCTTGTGGTCTTTTTATGGCAACACATTGCCTTCCCTGAGTGAGATGTTAGAGCTTAAAATGGCATCATaGACCCTGCTGATTCTTGCC +
Preference number: 2 (lower is better)
Translates to: SLWSFYGNTLPSLSEMLELKMAS*TLLILA
Trigger: GGCAAGAATCAGCAGGGTGCATGATGCCATTTTAAG...CTCTAACATCTCACTCAGGGAAGGCAATGTGTTGCCATAAAAAGACCACAAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
3UTR-3UTR GCA 90 bp GGGTTAGAAGGTGCCAGGGGGTATTCTAGGGTAGAAGTTTTGATAGTACGGAAGATACTGCAGTGCAAATaGAGTAAAGTCTCTTGGAAC +
Preference number: 2 (lower is better)
Translates to: GLEGARGYSRVEVLIVRKILQCK*SKVSWN
Trigger: GTTCCAAGAGACTTTACTGCATTTGCACTGCAGTAT...CTTCCGTACTATCAAAACTTCTACCCTAGAATACCCCCTGGCACCTTCTAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000642952.1
3UTR-3UTR CCA 90 bp CTAAGCGGCAGAAACACCCTGAGACTTAGCCTCAATGAAGCACTGGATGCCTTCTCATGTCTAGTAACATaGTCTCACTTGAATGATTTG +
Preference number: 2 (lower is better)
Translates to: LSGRNTLRLSLNEALDAFSCLVT*SHLNDL
Trigger: CAAATCATTCAAGTGAGACCATGTTACTAGACATGA...GAAGGCATCCAGTGCTTCATTGAGGCTAAGTCTCAGGGTGTTTCTGCCGCTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp AGGCCTGAGGCTAAGAACTGTATACTTCATTTAATCCCCCTAAAAACCCTTAGACTAACCCAAGGTCTCTaGACACTCCACAGAACCCAA +
Preference number: 2 (lower is better)
Translates to: RPEAKNCILHLIPLKTLRLTQGL*TLHRTQ
Trigger: TTGGGTTCTGTGGAGTGTCCAGAGACCTTGGGTTAG...TCTAAGGGTTTTTAGGGGGATTAAATGAAGTATACAGTTCTTAGCCTCAGGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp TTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGTCTCATCAAAAAGCTTaGCCTCCCGAAGTGCTGGGA +
Preference number: 2 (lower is better)
Translates to: FPFLRLLLFSGVRGKSAKSHQKA*PPEVLG
Trigger: TCCCAGCACTTCGGGAGGCCAAGCTTTTTGATGAGA...CTTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642177.1
ENST00000642537.1
3UTR CAA 90 bp AAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTCCATTCTaGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAG +
Preference number: 2 (lower is better)
Translates to: KKSTSPFPQTFRFPF*RLLLFSGVRGKSAK
Trigger: CTTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp GTTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAAACCTGTACAGAACTTaGACTCTTCAAAGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: VSILETTIVLWCQRKICQNLYRT*TLQRVG
Trigger: CCCCACCCTTTGAAGAGTTCAAGTTCTGTACAGGTT...TTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp TTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGAACCTGTACAGAACTTaGACTCTTCAAAGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: FPFLRLLLFSGVRGKSAKNLYRT*TLQRVG
Trigger: CCCCACCCTTTGAAGAGTTCAAGTTCTGTACAGGTT...CTTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp ATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTCCATCTTAGCTTTGCCTGGTaGGCTCATCTTCCAGTTCAA +
Preference number: 2 (lower is better)
Translates to: ICFRKSLPAHSLRHSGFHLSFAW*AHLPVQ
Trigger: TTGAACTGGAAGATGAGCTCACCAGGCAAAGCTAAG...ATGGAAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp GTTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGGTAAAGTAGAAGTCTaGGTTCTTGCCCCATCGACA +
Preference number: 2 (lower is better)
Translates to: VSILETTIVLWCQRKICQGKVEV*VLAPST
Trigger: TGTCGATGGGGCAAGAACTCAGACTTCTACTTTACC...TTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp AGCTTGTGGTCTTTTTATGGCAACACATTGCCTTCCCTGAGTGAGATGTTAGAGCTGACTCAGACATCTTaGGGGGAAAAGGAAACTAAA +
Preference number: 2 (lower is better)
Translates to: SLWSFYGNTLPSLSEMLELTQTS*GEKETK
Trigger: TTTAGTTTCCTTTTCCCCTCAAGATGTCTGAGTCAG...CTCTAACATCTCACTCAGGGAAGGCAATGTGTTGCCATAAAAAGACCACAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp CAGGTACCAAATCTAGTGAAGTACAGTAAACTGCTTGGGACCAGCAAACTAGGTCTGACTCAGACATCTTaGGGGGAAAAGGAAACTAAA +
Preference number: 2 (lower is better)
Translates to: QVPNLVKYSKLLGTSKLGLTQTS*GEKETK
Trigger: TTTAGTTTCCTTTTCCCCTCAAGATGTCTGAGTCAG...ACCTAGTTTGCTGGTCCCAAGCAGTTTACTGTACTTCACTAGATTTGGTACCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp AGCAAACTAGGTAGCATATGGGATAATATTAGGAGACAACTGCTTAACCAAGAATTAGGGTGGAACCCATaGGCTGAAGCCTGTGAAACC +
Preference number: 2 (lower is better)
Translates to: SKLGSIWDNIRRQLLNQELGWNP*AEACET
Trigger: GGTTTCACAGGCTTCAGCTCATGGGTTCCACCCTAA...TTCTTGGTTAAGCAGTTGTCTCCTAATATTATCCCATATGCTACCTAGTTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp GTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACTCAATCTTTAGGCACTaGAATCCCATATTCTCAGCT +
Preference number: 2 (lower is better)
Translates to: VGFNVFEGFTGYMDLHVYSIFRH*NPIFSA
Trigger: AGCTGAGAATATGGGATTTCAGTGCCTAAAGATTGA...GTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
3UTR-3UTR TCA 90 bp ACTCCCAATTTGTTTAATGTTTTCGCTGCTAGTTGCAGTAATTCCTTTGCACTCACCAAGTGGATCGCATaGGTGGCCAGTTTGCAGATA +
Preference number: 2 (lower is better)
Translates to: TPNLFNVFAASCSNSFALTKWIA*VASLQI
Trigger: TATCTGCAAACTGGCCACTCATGCGATCCACTTGGT...GAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAACATTAAACAAATTGGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
3UTR-3UTR TCA 90 bp ATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCTACAAAGTGCATTGGACCAAGTGGATCGCATaGGTGGCCAGTTTGCAGATA +
Preference number: 2 (lower is better)
Translates to: IPTLNKPRVWYFFYKVHWTKWIA*VASLQI
Trigger: TATCTGCAAACTGGCCACTCATGCGATCCACTTGGT...CCAATGCACTTTGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
3UTR-3UTR TCA 90 bp CTGAAAGAATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTTGCCACTCCTCTCATaGAAGACTACCAAGTGGATC +
Preference number: 2 (lower is better)
Translates to: LKECSSFFIPTLNKPRVWLPLLS*KTTKWI
Trigger: GATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAA...CCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTCTTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
3UTR-3UTR TCA 90 bp GGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAATTGGATCCTTTGGAATaGGAACTTCCAGTCCATCAA +
Preference number: 2 (lower is better)
Translates to: GFNVFEGFTGYMDLHVYKLDPLE*ELPVHQ
Trigger: TTGATGGACTGGAAGTTCTCATTCCAAAGGATCCAA...TTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp CAGGAATCTTCCAGGTCTTACCATAGTTGGCTTCAATGTATTCGAGGGTTTCACTTGGATCCTTTGGAATaGGAACTTCCAGTCCATCAA +
Preference number: 2 (lower is better)
Translates to: QESSRSYHSWLQCIRGFHLDPLE*ELPVHQ
Trigger: TTGATGGACTGGAAGTTCTCATTCCAAAGGATCCAA...GTGAAACCCTCGAATACATTGAAGCCAACTATGGTAAGACCTGGAAGATTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
3UTR-3UTR TCA 90 bp TCCCTTAGGACAGGAAGAGCGGTCAAGTTTAAGCACAAAACTCCATCTCTTCTATTCACAGCTCCACAATaGCTTAAGGAAATAGGGCTA +
Preference number: 2 (lower is better)
Translates to: SLRTGRAVKFKHKTPSLLFTAPQ*LKEIGL
Trigger: TAGCCCTATTTCCTTAAGTCATTGTGGAGCTGTGAA...TAGAAGAGATGGAGTTTTGTGCTTAAACTTGACCGCTCTTCCTGTCCTAAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
3UTR-3UTR GCA 90 bp GGAGACATTCATGGGTGCCTAACTACCAACAAGTTGTCAACTTCCCCAGGTAAGCAAAGGTTTTCATGTTaGTTTACAAATCCGGAATGG +
Preference number: 2 (lower is better)
Translates to: GDIHGCLTTNKLSTSPGKQRFSC*FTNPEW
Trigger: CCATTCCGGATTTGTAAAGCAACATGAAAACCTTTG...CTTACCTGGGGAAGTTGACAACTTGTTGGTAGTTAGGCACCCATGAATGTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR GCA 90 bp GATCTAGCCCAGGTCTTAATGATAGTGGAAGACAAGGAGGAAAGAGGGAACGTTAAAGTGGCAATGGGATaGATCTTGAGCTTAGAGAAT +
Preference number: 2 (lower is better)
Translates to: DLAQVLMIVEDKEERGNVKVAMG*ILSLEN
Trigger: ATTCTCTAAGCTCAAGATGCATCCCATTGCCACTTT...AACGTTCCCTCTTTCCTCCTTGTCTTCCACTATCATTAAGACCTGGGCTAGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR GCA 90 bp AGCTTGTGGTCTTTTTATGGCAACACATTGCCTTCCCTGAGTGAGATGTTAGAGCTTAGCTTCTCAAACTaGTGGTATTACAGGTGTGAG +
Preference number: 2 (lower is better)
Translates to: SLWSFYGNTLPSLSEMLELSFSN*WYYRCE
Trigger: CTCACACCTGTAATACCAGCAGTTTGAGAAGCTAAG...CTCTAACATCTCACTCAGGGAAGGCAATGTGTTGCCATAAAAAGACCACAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
3UTR-3UTR GCA 90 bp GGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGTGCCAGAGGATACTGCAGTGCAAATaGAGTAAAGTCTCTTGGAAC +
Preference number: 2 (lower is better)
Translates to: GTNFLSMCSLSLKWPCQRILQCK*SKVSWN
Trigger: GTTCCAAGAGACTTTACTGCATTTGCACTGCAGTAT...CCTCTGGCACGGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000676192.1
ENST00000676371.1
3UTR-3UTR GCA 90 bp GTAACTCTGGCCTGTCAAAAGCTCCTGGATAACGACCAAACTGTAACTTTCGGAATACTGCAGTGCAAATaGAGTAAAGTCTCTTGGAAC +
Preference number: 2 (lower is better)
Translates to: VTLACQKLLDNDQTVTFGILQCK*SKVSWN
Trigger: GTTCCAAGAGACTTTACTGCATTTGCACTGCAGTAT...TCCGAAAGTTACAGTTTGGTCGTTATCCAGGAGCTTTTGACAGGCCAGAGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000676192.1
ENST00000676371.1
3UTR-3UTR GCA 90 bp GTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACACGTGCCAGAGGTAGTTaGCACTCCTCTCATGAAAGA +
Preference number: 2 (lower is better)
Translates to: VTFSNLFSKKSTSPFPQTRARGS*HSSHER
Trigger: TCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACG...TGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000642537.1
ENST00000645933.1
ENST00000675736.1
3UTR-3UTR GCA 90 bp TTGCACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTGCTACTTCTTCTACAAAGTaGATTGGATCCTTTGGAATG +
Preference number: 2 (lower is better)
Translates to: LHSSERPQLPQCYHQGTATSSTK*IGSFGM
Trigger: CATTCCAAAGGATCCAATGCACTTTGTAGAAGAAGT...AGCAGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
3UTR-3UTR GCA 90 bp ACAGCAAACTCCCTTAGGACAGGAAGAGCGGTCAAGTTTAAGCACAAAACTCCAAAAAAGAAAGGCGGCTaGTTGATGAGGTCTATTAGA +
Preference number: 2 (lower is better)
Translates to: TANSLRTGRAVKFKHKTPKKKGG*LMRSIR
Trigger: TCTAATAGACCTCATCAAGCAGCCGCCTTTCTTTTT...TGGAGTTTTGTGCTTAAACTTGACCGCTCTTCCTGTCCTAAGGGAGTTTGCTGT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
3UTR-3UTR CCA 90 bp CAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTGAACTCTTCAAAGGGTaGGGGAGGGTTCCCTCAAAG +
Preference number: 2 (lower is better)
Translates to: QRFSCCFTNPEWVVVSYFELFKG*GRVPSK
Trigger: CTTTGAGGGAACCCTCCCCCACCCTTTGAAGAGTTC...AAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp AGCTTGTGGTCTTTTTATGGCAACACATTGCCTTCCCTGAGTGAGATGTTAGAGTGGGAATGCACTCTATaGGCTGATTTTCTAGCAAAG +
Preference number: 2 (lower is better)
Translates to: SLWSFYGNTLPSLSEMLEWECTL*ADFLAK
Trigger: CTTTGCTAGAAAATCAGCCCATAGAGTGCATTCCCA...CTCTAACATCTCACTCAGGGAAGGCAATGTGTTGCCATAAAAAGACCACAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp CTGATGTCTCCAGATGTGAACTGTCTTATTGTCTGGAGAGAAGGCATTTTCCAGAGAACCTGTGTCAATTaGGCCAAGATGTCTTGGATT +
Preference number: 2 (lower is better)
Translates to: LMSPDVNCLIVWREGIFQRTCVN*AKMSWI
Trigger: AATCCAAGACATCTTGGCCCAATTGACACAGGTTCT...CTGGAAAATGCCTTCTCTCCAGACAATAAGACAGTTCACATCTGGAGACATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp AGCTTGTGGTCTTTTTATGGCAACACATTGCCTTCCCTGAGTGAGATGTTAGAGCTTGTGGTCTTTTTATaGCAACACATTGCCTTCCCT +
Preference number: 2 (lower is better)
Translates to: SLWSFYGNTLPSLSEMLELVVFL*QHIAFP
Trigger: AGGGAAGGCAATGTGTTGCCATAAAAAGACCACAAG...CTCTAACATCTCACTCAGGGAAGGCAATGTGTTGCCATAAAAAGACCACAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp CAGGAATCTTCCAGGTCTTACCATAGTTGGCTTCAATGTATTCGAGGGTTTCACACATCATCTTTTCCCTaGAAGGATAGTTCCAAGCTG +
Preference number: 2 (lower is better)
Translates to: QESSRSYHSWLQCIRGFHTSSFP*KDSSKL
Trigger: CAGCTTGGAACTATCCTTCCAGGGAAAAGATGATGT...GTGAAACCCTCGAATACATTGAAGCCAACTATGGTAAGACCTGGAAGATTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
3UTR-3UTR CCA 90 bp ATAGTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCACATCATCTTTTCCCTaGAAGGATAGTTCCAAGCTG +
Preference number: 2 (lower is better)
Translates to: IVGFNVFEGFTGYMDLHVTSSFP*KDSSKL
Trigger: CAGCTTGGAACTATCCTTCCAGGGAAAAGATGATGT...GACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCAACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp GGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAAGTTTCACAGGGTACATaGACCTTCATGTCTACAAAC +
Preference number: 2 (lower is better)
Translates to: GFNVFEGFTGYMDLHVYKVSQGT*TFMSTN
Trigger: GTTTGTAGACATGAAGGTCCATGTACCCTGTGAAAC...TTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000644273.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp ATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCAGGTCTTACCATAGTTaGCTTCAATGTATTCGAGGG +
Preference number: 2 (lower is better)
Translates to: MYSRVSQGTWTFMSTNSVRSYHS*LQCIRG
Trigger: CCCTCGAATACATTGAAGCCAACTATGGTAAGACCT...GACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp AAGGTACTGCTGAAAGAATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTTCTCATCAAAAAGCTTaGCCTCCCGAAGTGCTGGGA +
Preference number: 2 (lower is better)
Translates to: KVLLKECSSFFIPTLNKPSHQKA*PPEVLG
Trigger: TCCCAGCACTTCGGGAGGCCAAGCTTTTTGATGAGA...AGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTCTTTCAGCAGTACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642537.1
3UTR-3UTR CCA 90 bp ATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCTTCCTTTCCATAGTTaGCTTCAATGTATTCGAGGG +
Preference number: 2 (lower is better)
Translates to: MYSRVSQGTWTFMSTNSVLPFHS*LQCIRG
Trigger: CCCTCGAATACATTGAAGCCAACTATGGAAAGGAAG...GACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
3UTR-3UTR CCA 90 bp ATTATAATACAAGTGCAAGGGTGGAGGAGAGGGCAGCCCAGACAAATACAACTGGATTGGAGGGTGGATTaGGGAAAATTAGTTGGTAAA +
Preference number: 2 (lower is better)
Translates to: IIIQVQGWRRGQPRQIQLDWRVD*GKLVGK
Trigger: TTTACCAACTAATTTTCCCCAATCCACCCTCCAATC...CAGTTGTATTTGTCTGGGCTGCCCTCTCCTCCACCCTTGCACTTGTATTATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676310.1
3UTR CAA 90 bp CTCCCAATTTGTTTAATGTTTTCGCTGCTAGTTGCAGTAATTCCTTaGCACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAA +
Preference number: 2 (lower is better)
Translates to: LPICLMFSLLVAVIP*HSSERPQLPQCYHQ
Trigger: TTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAACATTAAACAAATTGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
3UTR-3UTR TCA 90 bp CGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGTGCATTGTATGTGGCACATaGAAATTCCTCAGTACTAAG +
Preference number: 2 (lower is better)
Translates to: RKGTNFLSMCSLSLKWPCIVCGT*KFLSTK
Trigger: CTTAGTACTGAGGAATTTTCATGTGCCACATACAAT...GCACGGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCCCTTCCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
3UTR-3UTR TCA 90 bp CCTGAGGCTAAGAACTGTATACTTCATTTAATCCCCCTAAAAACCCTTAGAAGTAACCTGTACAGAACTTaGACTCTTCAAAGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: PEAKNCILHLIPLKTLRSNLYRT*TLQRVG
Trigger: CCCCACCCTTTGAAGAGTTCAAGTTCTGTACAGGTT...ACTTCTAAGGGTTTTTAGGGGGATTAAATGAAGTATACAGTTCTTAGCCTCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp GGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAAATGGTCTCACTTGAATaGTTTGTCAACAAGTGCCAT +
Preference number: 2 (lower is better)
Translates to: GFNVFEGFTGYMDLHVYKMVSLE*FVNKCH
Trigger: ATGGCACTTGTTGACAAATCATTCAAGTGAGACCAT...TTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp CCTCAGACATTCAGGTTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGACTGACTCAGACATCTTaGGGGGAAAAGGAAACTAAA +
Preference number: 2 (lower is better)
Translates to: PQTFRFPFLRLLLFSGVRLTQTS*GEKETK
Trigger: TTTAGTTTCCTTTTCCCCTCAAGATGTCTGAGTCAG...TCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAACCTGAATGTCTGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp CTGATGTCTCCAGATGTGAACTGTCTTATTGTCTGGAGAGAAGGCATTTTCCAGAATGTGGCACTTTCTTaGCTAGGTTTTGAGGGAATA +
Preference number: 2 (lower is better)
Translates to: LMSPDVNCLIVWREGIFQNVALS*LGFEGI
Trigger: TATTCCCTCAAAACCTAGTCAAGAAAGTGCCACATT...CTGGAAAATGCCTTCTCTCCAGACAATAAGACAGTTCACATCTGGAGACATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp GTTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAATCATCAAGGTACTGCTaGAAGAATGCTCGAGCTTCT +
Preference number: 2 (lower is better)
Translates to: VSILETTIVLWCQRKICQSSRYC*KNARAS
Trigger: AGAAGCTCGAGCATTCTTTCAGCAGTACCTTGATGA...TTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000642537.1
ENST00000645933.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp ATAGTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTCTACCCATACCAGTTaGTTCAAAATGGGAAGGAAA +
Preference number: 2 (lower is better)
Translates to: IVGFNVFEGFTGYMDLHVSTHTS*FKMGRK
Trigger: TTTCCTTCCCATTTTGAATCAACTGGTATGGGTAGA...GACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCAACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp AGTCCCACGTCTTTACAGGAATCTTCCAGGTCTTACCATAGTTGGCTTCAATGTTCTACCCATACCAGTTaGTTCAAAATGGGAAGGAAA +
Preference number: 2 (lower is better)
Translates to: SPTSLQESSRSYHSWLQCSTHTS*FKMGRK
Trigger: TTTCCTTCCCATTTTGAATCAACTGGTATGGGTAGA...ACATTGAAGCCAACTATGGTAAGACCTGGAAGATTCCTGTAAAGACGTGGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp ATTGCTATAATAGAGATGACAACCACAGCAAACTCCCTTAGGACAGGAAGAGCGTGGGTCTTGGGCACTTaGCAGTTATATACTTCATTT +
Preference number: 2 (lower is better)
Translates to: IAIIEMTTTANSLRTGRAWVLGT*QLYTSF
Trigger: AAATGAAGTATATAACTGTCAAGTGCCCAAGACCCA...CGCTCTTCCTGTCCTAAGGGAGTTTGCTGTGGTTGTCATCTCTATTATAGCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
3UTR-3UTR TCA 90 bp ATGATAGAAAATCTGGGACTCACACCATCTGTCCAGACAGTTCTATCACTGCTCAATGAACAGTTCTTTTaGGGTTTGCAGGTTTCGGAT +
Preference number: 2 (lower is better)
Translates to: MIENLGLTPSVQTVLSLLNEQFF*GLQVSD
Trigger: ATCCGAAACCTGCAAACCTCAAAAGAACTGTTCATT...GAGCAGTGATAGAACTGTCTGGACAGATGGTGTGAGTCCCAGATTTTCTATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675668.1
3UTR-3UTR GCA 90 bp TTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGACATACCAGCTTAAATaGCCAGAAGAGGAGTGGGTT +
Preference number: 2 (lower is better)
Translates to: FPFLRLLLFSGVRGKSAKTYQLK*PEEEWV
Trigger: AACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGT...CTTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR GCA 90 bp CAGGTACCAAATCTAGTGAAGTACAGTAAACTGCTTGGGACCAGCAAACTAGGTTCCTGCCTATCTATGTaGCATTTGAAGTACTGTAGT +
Preference number: 2 (lower is better)
Translates to: QVPNLVKYSKLLGTSKLGSCLSM*HLKYCS
Trigger: ACTACAGTACTTCAAATGGCACATAGATAGGCAGGA...ACCTAGTTTGCTGGTCCCAAGCAGTTTACTGTACTTCACTAGATTTGGTACCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR GCA 90 bp TTAAATGCCCAGAAGAGGAGTGGGTTATTCTTTTCAACTAGTATATCCTTCCTTCATGAGTGGCCAGTTTaGAGATATAGTGCAGGGGGA +
Preference number: 2 (lower is better)
Translates to: LNAQKRSGLFFSTSISFLHEWPV*RYSAGG
Trigger: TCCCCCTGCACTATATCTGCAAACTGGCCACTCATG...AAGGAAGGATATACTAGTTGAAAAGAATAACCCACTCCTCTTCTGGGCATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
3UTR-3UTR GCA 90 bp AGAATGGTACTCCCAATTTGTTTAATGTTTTCGCTGCTAGTTGCAGTAATTCCTCGTGCCAGAGGTAGTTaGCACTCCTCTCATGAAAGA +
Preference number: 2 (lower is better)
Translates to: RMVLPICLMFSLLVAVIPRARGS*HSSHER
Trigger: TCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACG...AGGAATTACTGCAACTAGCAGCGAAAACATTAAACAAATTGGGAGTACCATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
3UTR-3UTR GCA 90 bp GACCCTACTGGATCTTTTCTTTATGCCAGGTACAGTAGATACTGGGCCAACACAACTTCTTCTACAAAGTaGATTGGATCCTTTGGAATG +
Preference number: 2 (lower is better)
Translates to: DPTGSFLYARYSRYWANTTSSTK*IGSFGM
Trigger: CATTCCAAAGGATCCAATGCACTTTGTAGAAGAAGT...TGTGTTGGCCCAGTATCTACTGTACCTGGCATAAAGAAAAGATCCAGTAGGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
3UTR-3UTR GCA 90 bp TGGGGGAATCTTCCAAAGAAACTACTCTACTCAGCCATCTCCTGTTCTTTTCTCAGTTCTTTTGAGGTTTaGAGGTTTCGGATCATGTCA +
Preference number: 2 (lower is better)
Translates to: WGNLPKKLLYSAISCSFLSSFEV*RFRIMS
Trigger: TGACATGATCCGAAACCTGCAAACCTCAAAAGAACT...GAGAAAAGAACAGGAGATGGCTGAGTAGAGTAGTTTCTTTGGAAGATTCCCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675668.1
3UTR-3UTR CCA 90 bp GGAGACATTCATGGGTGCCTAACTACCAACAAGTTGTCAACTTCCCCAGGTAAGCTAGCAAAGAGAAAATaGATTATGATGATGTGCCAT +
Preference number: 2 (lower is better)
Translates to: GDIHGCLTTNKLSTSPGKLAKRK*IMMMCH
Trigger: ATGGCACATCATCATAATCCATTTTCTCTTTGCTAG...CTTACCTGGGGAAGTTGACAACTTGTTGGTAGTTAGGCACCCATGAATGTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp CCTGAGGCTAAGAACTGTATACTTCATTTAATCCCCCTAAAAACCCTTAGAAGTCTGAGCACAAGCAAATaGTCCTCATCAAGTAGGGTG +
Preference number: 2 (lower is better)
Translates to: PEAKNCILHLIPLKTLRSLSTSK*SSSSRV
Trigger: CACCCTACTTGATGAGGACCATTTGCTTGTGCTCAG...ACTTCTAAGGGTTTTTAGGGGGATTAAATGAAGTATACAGTTCTTAGCCTCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp AGGCCTGAGGCTAAGAACTGTATACTTCATTTAATCCCCCTAAAAACCCTTAGACTCTGGAGACATTCATaGGTGCCTAACTACCAACAA +
Preference number: 2 (lower is better)
Translates to: RPEAKNCILHLIPLKTLRLWRHS*VPNYQQ
Trigger: TTGTTGGTAGTTAGGCACCCATGAATGTCTCCAGAG...TCTAAGGGTTTTTAGGGGGATTAAATGAAGTATACAGTTCTTAGCCTCAGGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp TGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCAGTGGATCGCATGAGTaGCCAGTTTGCAGATATAGT +
Preference number: 2 (lower is better)
Translates to: CSSFFIPTLNKPRVWYFFSGSHE*PVCRYS
Trigger: ACTATATCTGCAAACTGGCCACTCATGCGATCCACT...GAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
3UTR-3UTR CCA 90 bp CTGAAAGAATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGAGTGGATCGCATGAGTaGCCAGTTTGCAGATATAGT +
Preference number: 2 (lower is better)
Translates to: LKECSSFFIPTLNKPRVWSGSHE*PVCRYS
Trigger: ACTATATCTGCAAACTGGCCACTCATGCGATCCACT...CCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTCTTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
3UTR-3UTR CCA 90 bp GTTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGTGCATTGGATCCTTTaGAATGAGAACTTCCAGTCC +
Preference number: 2 (lower is better)
Translates to: VSILETTIVLWCQRKICQVHWIL*NENFQS
Trigger: GGACTGGAAGTTCTCATTCCAAAGGATCCAATGCAC...TTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000642537.1
ENST00000645933.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp GTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACTATCTTTCAAACTTCTaGCTTCTACCCATACCAGTT +
Preference number: 2 (lower is better)
Translates to: VGFNVFEGFTGYMDLHVYYLSNF*LLPIPV
Trigger: AACTGGTATGGGTAGAAGCCAGAAGTTTGAAAGATA...GTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR CAA 90 bp GACTCACACCATCTGTCCAGACAGTTCTATCACTGCTCATTTCTCTaGTTAAATAATCAGAACACTTCACACTTCCCAAACACTGCTACT +
Preference number: 2 (lower is better)
Translates to: DSHHLSRQFYHCSFL*LNNQNTSHFPNTAT
Trigger: AGTAGCAGTGTTTGGGAAGTGTGAAGTGTTCTGATTATTTAACAAGAGAAATGAGCAGTGATAGAACTGTCTGGACAGATGGTGTGAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675668.1
3UTR-3UTR TCA 90 bp ATTTGTTTAATGTTTTCGCTGCTAGTTGCAGTAATTCCTTTGCACTCTTCCGAAAACCTGTACAGAACTTaGACTCTTCAAAGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: ICLMFSLLVAVIPLHSSENLYRT*TLQRVG
Trigger: CCCCACCCTTTGAAGAGTTCAAGTTCTGTACAGGTT...TTCGGAAGAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAACATTAAACAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
3UTR-3UTR TCA 90 bp AGTCCCACGTCTTTACAGGAATCTTCCAGGTCTTACCATAGTTGGCTTCAATGTCAAAGTCTGATCACTTaGATATTAACTCAGACTCCA +
Preference number: 2 (lower is better)
Translates to: SPTSLQESSRSYHSWLQCQSLIT*ILTQTP
Trigger: TGGAGTCTGAGTTAATATTCAAGTGATCAGACTTTG...ACATTGAAGCCAACTATGGTAAGACCTGGAAGATTCCTGTAAAGACGTGGGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp GGGAGTCCCAATTGGAAATGGGGAGAAATGTGGAGTGTATGCATTTCTAAATACATGGTCTCACTTGAATaGTTTGTCAACAAGTGCCAT +
Preference number: 2 (lower is better)
Translates to: GSPNWKWGEMWSVCISKYMVSLE*FVNKCH
Trigger: ATGGCACTTGTTGACAAATCATTCAAGTGAGACCAT...GTATTTAGAAATGCATACACTCCACATTTCTCCCCATTTCCAATTGGGACTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp GGGAGTCCCAATTGGAAATGGGGAGAAATGTGGAGTGTATGCATTTCTAAATACACAAACTCTATGATCTaGGGTAGGGTGAATAGTTGT +
Preference number: 2 (lower is better)
Translates to: GSPNWKWGEMWSVCISKYTNSMI*GRVNSC
Trigger: ACAACTATTCACCCTACCTCAGATCATAGAGTTTGT...GTATTTAGAAATGCATACACTCCACATTTCTCCCCATTTCCAATTGGGACTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp ATCAGCTGTCCCACCAAGCAGCTACTCTTAGGGATGCTCAATTTTAGGAACTATAAGATGAAGTATGGATaGATCAGAATCAGAGGTAAG +
Preference number: 2 (lower is better)
Translates to: ISCPTKQLLLGMLNFRNYKMKYG*IRIRGK
Trigger: CTTACCTCTGATTCTGATTCATCCATACTTCATCTT...ATAGTTCCTAAAATTGAGCATCCCTAAGAGTAGCTGCTTGGTGGGACAGCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp AGCTTGTGGTCTTTTTATGGCAACACATTGCCTTCCCTGAGTGAGATGTTAGAGTTCCAGATAAAGGTATaGAGGTTGCCTAAGAATTCT +
Preference number: 2 (lower is better)
Translates to: SLWSFYGNTLPSLSEMLEFQIKV*RLPKNS
Trigger: AGAATTCTTAGGCAACCTTCATACCTTTATCTGGAA...CTCTAACATCTCACTCAGGGAAGGCAATGTGTTGCCATAAAAAGACCACAAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp AGGCCTGAGGCTAAGAACTGTATACTTCATTTAATCCCCCTAAAAACCCTTAGATCATTCTTCCATAGGTaGTACTGCAGTGCAAATGCA +
Preference number: 2 (lower is better)
Translates to: RPEAKNCILHLIPLKTLRSFFHR*YCSANA
Trigger: TGCATTTGCACTGCAGTATCACCTATGGAAGAATGA...TCTAAGGGTTTTTAGGGGGATTAAATGAAGTATACAGTTCTTAGCCTCAGGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000602526.1
3UTR-3UTR TCA 90 bp AACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGTGCCAGAGGTATCAATCTTTAGGCACTaGAATCCCATATTCTCAGCT +
Preference number: 2 (lower is better)
Translates to: NKFPVNVFFKSQVAVPEVSIFRH*NPIFSA
Trigger: AGCTGAGAATATGGGATTTCAGTGCCTAAAGATTGA...TACCTCTGGCACGGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000676192.1
ENST00000676371.1
3UTR-3UTR TCA 90 bp AACTCAGTCCAGCACAGTGTAAACTTCGGAAACAGGTATCTGTCTTATCCTATCTCAATCTTTAGGCACTaGAATCCCATATTCTCAGCT +
Preference number: 2 (lower is better)
Translates to: NSVQHSVNFGNRYLSYPISIFRH*NPIFSA
Trigger: AGCTGAGAATATGGGATTTCAGTGCCTAAAGATTGA...GATAGGATAAGACAGATACCTGTTTCCGAAGTTTACACTGTGCTGGACTGAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642537.1
3UTR-3UTR TCA 90 bp ATTTATCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTACCAAGTGGATCGCATaGGTGGCCAGTTTGCAGATA +
Preference number: 2 (lower is better)
Translates to: IYQRFSCCFTNPEWVVVSTKWIA*VASLQI
Trigger: TATCTGCAAACTGGCCACTCATGCGATCCACTTGGT...ACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000642537.1
ENST00000645933.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp AATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTGGTTGTCTCTAACCTaGAAGAATGCTCGAGCTTCT +
Preference number: 2 (lower is better)
Translates to: NARASLYLHSINLECGTSWLSLT*KNARAS
Trigger: AGAAGCTCGAGCATTCTTTCAGGTTAGAGACAACCA...AGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
3UTR-3UTR TCA 90 bp TGGGGGAATCTTCCAAAGAAACTACTCTACTCAGCCATCTCCTGTTCTTTTCTCGGTAAAATAAAGAGCTaGGATTCAACAGCAATCACA +
Preference number: 2 (lower is better)
Translates to: WGNLPKKLLYSAISCSFLGKIKS*DSTAIT
Trigger: TGTGATTGCTGTTGAATCTCAGCTCTTTATTTTACC...GAGAAAAGAACAGGAGATGGCTGAGTAGAGTAGTTTCTTTGGAAGATTCCCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675668.1
3UTR-3UTR GCA 90 bp AGGCCTGAGGCTAAGAACTGTATACTTCATTTAATCCCCCTAAAAACCCTTAGACACCCTGCTGATTCTTaGCTAGTTGAGATAGAAACA +
Preference number: 2 (lower is better)
Translates to: RPEAKNCILHLIPLKTLRHPADS*LVEIET
Trigger: TGTTTCTATCTCAACTAGGCAAGAATCAGCAGGGTG...TCTAAGGGTTTTTAGGGGGATTAAATGAAGTATACAGTTCTTAGCCTCAGGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
3UTR-3UTR GCA 90 bp TTCATGAAGTCTTTTCTAAATCTACATGGTCCATCTTCTATAGTGGCTTTATCCCGTGCCAGAGGTAGTTaGCACTCCTCTCATGAAAGA +
Preference number: 2 (lower is better)
Translates to: FMKSFLNLHGPSSIVALSRARGS*HSSHER
Trigger: TCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACG...GGATAAAGCCACTATAGAAGATGGACCATGTAGATTTAGAAAAGACTTCATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
3UTR-3UTR GCA 90 bp GTCAGGGTCAAGCAGAGATTCTATAACTCACCTTCTAAACACATCCTCCAAGTTAAAGATCACCCCTGTTaGCTTTGGCTGTTAAAATAC +
Preference number: 2 (lower is better)
Translates to: VRVKQRFYNSPSKHILQVKDHPC*LWLLKY
Trigger: GTATTTTAACAGCCAAAGGCAACAGGGGTGATCTTT...AACTTGGAGGATGTGTTTAGAAGGTGAGTTATAGAATCTCTGCTTGACCCTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674767.1
3UTR-3UTR CCA 90 bp GATCTAGCCCAGGTCTTAATGATAGTGGAAGACAAGGAGGAAAGAGGGAACGTTTTTACAAATCCGGAATaGGTGGTTGTAAGTTACTTT +
Preference number: 2 (lower is better)
Translates to: DLAQVLMIVEDKEERGNVFTNPE*VVVSYF
Trigger: AAAGTAACTTACAACCACCCATTCCGGATTTGTAAA...AACGTTCCCTCTTTCCTCCTTGTCTTCCACTATCATTAAGACCTGGGCTAGATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp GACCTCTCTGTCGCCTTAGGTTCTCAATCTGAACAAAAAGATACTAAGCGGCAGAGGACAGAAGACTGTTaGTTATCATTTATCAAAGGT +
Preference number: 2 (lower is better)
Translates to: DLSVALGSQSEQKDTKRQRTEDC*LSFIKG
Trigger: ACCTTTGATAAATGATAACCAACAGTCTTCTGTCCT...CTGCCGCTTAGTATCTTTTTGTTCAGATTGAGAACCTAAGGCGACAGAGAGGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp GTTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAATGGGAATGCACTCTATaGGCTGATTTTCTAGCAAAG +
Preference number: 2 (lower is better)
Translates to: VSILETTIVLWCQRKICQWECTL*ADFLAK
Trigger: CTTTGCTAGAAAATCAGCCCATAGAGTGCATTCCCA...TTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp GTCTATGTAGGGAAGAATATAGAACCTGTGTCAATTGGGCCAAGATGTCTTGGACAGCTATTTAGAATTTaGGAATGCACTCTATGGGCT +
Preference number: 2 (lower is better)
Translates to: VYVGKNIEPVSIGPRCLGQLFRI*ECTLWA
Trigger: AGCCCATAGAGTGCATTCCCAAATTCTAAATAGCTG...TCCAAGACATCTTGGCCCAATTGACACAGGTTCTATATTCTTCCCTACATAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp TGTCCCACCAAGCAGCTACTCTTAGGGATGCTCAATTTTAGGAACTATGGTTTTCCTCATCAAGTAGGGTaGATTTTGCCCAAAAATAGT +
Preference number: 2 (lower is better)
Translates to: CPTKQLLLGMLNFRNYGFPHQVG*ILPKNS
Trigger: ACTATTTTTGGGCAAAATCCACCCTACTTGATGAGG...AAAACCATAGTTCCTAAAATTGAGCATCCCTAAGAGTAGCTGCTTGGTGGGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp AATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTAGTGGATCGCATGAGTaGCCAGTTTGCAGATATAGT +
Preference number: 2 (lower is better)
Translates to: NARASLYLHSINLECGTSSGSHE*PVCRYS
Trigger: ACTATATCTGCAAACTGGCCACTCATGCGATCCACT...AGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
3UTR-3UTR CCA 90 bp AAAAGAAGTAGGTATTTGTCTCATTCATCTAGGCTTCTCCACTGTAACCTAGCAGTGCATTGGATCCTTTaGAATGAGAACTTCCAGTCC +
Preference number: 2 (lower is better)
Translates to: KRSRYLSHSSRLLHCNLAVHWIL*NENFQS
Trigger: GGACTGGAAGTTCTCATTCCAAAGGATCCAATGCAC...TGCTAGGTTACAGTGGAGAAGCCTAGATGAATGAGACAAATACCTACTTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
3UTR-3UTR CCA 90 bp GCCTTTCAAAATCATCTTTATATCCCCAGGGCCAGAAGCCTGCGGAACACAATAAATAAACCTAGAGTGTaGTACTTCTTCTACAAAGTG +
Preference number: 2 (lower is better)
Translates to: AFQNHLYIPRARSLRNTINKPRV*YFFYKV
Trigger: CACTTTGTAGAAGAAGTACCACACTCTAGGTTTATT...TATTGTGTTCCGCAGGCTTCTGGCCCTGGGGATATAAAGATGATTTTGAAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
3UTR-3UTR CCA 90 bp TTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGGTTTCACAGGGTACATaGACCTTCATGTCTACAAAC +
Preference number: 2 (lower is better)
Translates to: FPFLRLLLFSGVRGKSAKVSQGT*TFMSTN
Trigger: GTTTGTAGACATGAAGGTCCATGTACCCTGTGAAAC...CTTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp AAAGTAGCACTAACATACCAGCTTAAATGCCCAGAAGAGGAGTGGGTTATTCTTAGGTCTTACCATAGTTaGCTTCAATGTATTCGAGGG +
Preference number: 2 (lower is better)
Translates to: KVALTYQLKCPEEEWVILRSYHS*LQCIRG
Trigger: CCCTCGAATACATTGAAGCCAACTATGGTAAGACCT...AAGAATAACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGTTAGTGCTACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp ATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCTATCTCAATATAACTaGATAACCTCATCCCACTCA +
Preference number: 2 (lower is better)
Translates to: MYSRVSQGTWTFMSTNSVLSQYN*ITSSHS
Trigger: TGAGTGGGATGAGGTTATCCAGTTATATTGAGATAG...GACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp TCAGTTACACTTGCCACATTTCAAATATTCAGTAGTCATGTGGCTAGTGGCTACACATGGGGAAAAAGATaGCTCCTTCCACTAAGACAT +
Preference number: 2 (lower is better)
Translates to: SVTLATFQIFSSHVASGYTWGKR*LLPLRH
Trigger: ATGTCTTAGTGGAAGGAGCCATCTTTTTCCCCATGT...GTAGCCACTAGCCACATGACTACTGAATATTTGAAATGTGGCAAGTGTAACTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674633.1
3UTR-3UTR CCA 90 bp GACCCTACTGGATCTTTTCTTTATGCCAGGTACAGTAGATACTGGGCCAACACATTTTCTAAATCTACATaGTCCATCTTCTATAGTGGC +
Preference number: 2 (lower is better)
Translates to: DPTGSFLYARYSRYWANTFSKST*SIFYSG
Trigger: GCCACTATAGAAGATGGACCATGTAGATTTAGAAAA...TGTGTTGGCCCAGTATCTACTGTACCTGGCATAAAGAAAAGATCCAGTAGGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
3UTR-3UTR CCA 90 bp GCAAACTCCCTTAGGACAGGAAGAGCGGTCAAGTTTAAGCACAAAACTCCATCTTTTTCTAAATCTACATaGTCCATCTTCTATAGTGGC +
Preference number: 2 (lower is better)
Translates to: ANSLRTGRAVKFKHKTPSFSKST*SIFYSG
Trigger: GCCACTATAGAAGATGGACCATGTAGATTTAGAAAA...AGATGGAGTTTTGTGCTTAAACTTGACCGCTCTTCCTGTCCTAAGGGAGTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
3UTR-3UTR CCA 90 bp AGTAACATGATAGAAAATCTGGGACTCACACCATCTGTCCAGACAGTTCTATCACAACAGCAATCACACTaGCTTCAGAATATCTACCTC +
Preference number: 2 (lower is better)
Translates to: SNMIENLGLTPSVQTVLSQQQSH*LQNIYL
Trigger: GAGGTAGATATTCTGAAGCCAGTGTGATTGCTGTTG...TGATAGAACTGTCTGGACAGATGGTGTGAGTCCCAGATTTTCTATCATGTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675668.1
3UTR-3UTR TCA 90 bp TTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTCCATTCGAGAATTACATCAGATaGCTCTTTCTGTGTCTTCAA +
Preference number: 2 (lower is better)
Translates to: LFSKKSTSPFPQTFRFPFENYIR*LFLCLQ
Trigger: TTGAAGACACAGAAAGAGTCATCTGATGTAATTCTC...GAATGGAAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp GTCTATGTAGGGAAGAATATAGAACCTGTGTCAATTGGGCCAAGATGTCTTGGAATTGTATGTGGCACATaGAAATTCCTCAGTACTAAG +
Preference number: 2 (lower is better)
Translates to: VYVGKNIEPVSIGPRCLGIVCGT*KFLSTK
Trigger: CTTAGTACTGAGGAATTTTCATGTGCCACATACAAT...TCCAAGACATCTTGGCCCAATTGACACAGGTTCTATATTCTTCCCTACATAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp GGGAGTCCCAATTGGAAATGGGGAGAAATGTGGAGTGTATGCATTTCTAAATACATTGTATGTGGCACATaGAAATTCCTCAGTACTAAG +
Preference number: 2 (lower is better)
Translates to: GSPNWKWGEMWSVCISKYIVCGT*KFLSTK
Trigger: CTTAGTACTGAGGAATTTTCATGTGCCACATACAAT...GTATTTAGAAATGCATACACTCCACATTTCTCCCCATTTCCAATTGGGACTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp GCACTAACATACCAGCTTAAATGCCCAGAAGAGGAGTGGGTTATTCTTTTCAACCAAAGTCTGATCACTTaGATATTAACTCAGACTCCA +
Preference number: 2 (lower is better)
Translates to: ALTYQLKCPEEEWVILFNQSLIT*ILTQTP
Trigger: TGGAGTCTGAGTTAATATTCAAGTGATCAGACTTTG...GTTGAAAAGAATAACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGTTAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp TGTCCCACCAAGCAGCTACTCTTAGGGATGCTCAATTTTAGGAACTATGGTTTTCAAAGTCTGATCACTTaGATATTAACTCAGACTCCA +
Preference number: 2 (lower is better)
Translates to: CPTKQLLLGMLNFRNYGFQSLIT*ILTQTP
Trigger: TGGAGTCTGAGTTAATATTCAAGTGATCAGACTTTG...AAAACCATAGTTCCTAAAATTGAGCATCCCTAAGAGTAGCTGCTTGGTGGGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp TTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCTACAAAGTGCATTTTGCCACTCCTCTCATaGAAGACTACCAAGTGGATC +
Preference number: 2 (lower is better)
Translates to: LYLHSINLECGTSSTKCILPLLS*KTTKWI
Trigger: GATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAA...AATGCACTTTGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
3UTR-3UTR TCA 90 bp AATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTTGGATCCTTTGGAATaGGAACTTCCAGTCCATCAA +
Preference number: 2 (lower is better)
Translates to: NARASLYLHSINLECGTSLDPLE*ELPVHQ
Trigger: TTGATGGACTGGAAGTTCTCATTCCAAAGGATCCAA...AGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
3UTR-3UTR TCA 90 bp TCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTTTGGATCCTTTGGAATaGGAACTTCCAGTCCATCAA +
Preference number: 2 (lower is better)
Translates to: SNLFSKKSTSPFPQTFRFLDPLE*ELPVHQ
Trigger: TTGATGGACTGGAAGTTCTCATTCCAAAGGATCCAA...AAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000642537.1
ENST00000645933.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp TGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCTCTACCCATACCAGTTaGTTCAAAATGGGAAGGAAA +
Preference number: 2 (lower is better)
Translates to: CSSFFIPTLNKPRVWYFFSTHTS*FKMGRK
Trigger: TTTCCTTCCCATTTTGAATCAACTGGTATGGGTAGA...GAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp TACAGTACTGACAGTAGCTACTACTTACACAATACTTACAATGTGCCAGGTACTGTTCAGAATAGTGCCTaGCACACAGTAGTATTACTC +
Preference number: 2 (lower is better)
Translates to: YSTDSSYYLHNTYNVPGTVQNSA*HTVVLL
Trigger: GAGTAATACTACTGTGTGTCAGGCACTATTCTGAAC...AGTACCTGGCACATTGTAAGTATTGTGTAAGTAGTAGCTACTGTCAGTACTGTA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675668.1
3UTR-3UTR GCA 90 bp CAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTACATACCAGCTTAAATaGCCAGAAGAGGAGTGGGTT +
Preference number: 2 (lower is better)
Translates to: QRFSCCFTNPEWVVVSYFTYQLK*PEEEWV
Trigger: AACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGT...AAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR GCA 90 bp CTGAAAGAATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGATACTGCAGTGCAAATaGAGTAAAGTCTCTTGGAAC +
Preference number: 2 (lower is better)
Translates to: LKECSSFFIPTLNKPRVWILQCK*SKVSWN
Trigger: GTTCCAAGAGACTTTACTGCATTTGCACTGCAGTAT...CCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTCTTTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000676192.1
ENST00000676371.1
3UTR-3UTR GCA 90 bp TCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTGTTTTCGCTGCTAGTTaGAGTAATTCCTTTGCACTC +
Preference number: 2 (lower is better)
Translates to: SNLFSKKSTSPFPQTFRFVFAAS*SNSFAL
Trigger: GAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAAC...AAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000642537.1
ENST00000645933.1
ENST00000675736.1
3UTR-3UTR GCA 90 bp TTATATAGGAGCTTGTTAATGGGTCCCTACAAAATCTCTGTATTAGGTTGGGTTCACCCTGCTGATTCTTaGCATAGTTGGCTTCAATGT +
Preference number: 2 (lower is better)
Translates to: LYRSLLMGPYKISVLGWVHPADS*HSWLQC
Trigger: ACATTGAAGCCAACTATGGCAAGAATCAGCAGGGTG...AACCCAACCTAATACAGAGATTTTGTAGGGACCCATTAACAAGCTCCTATATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642952.1
ENST00000644273.1
3UTR-3UTR CCA 90 bp CAGGAATCTTCCAGGTCTTACCATAGTTGGCTTCAATGTATTCGAGGGTTTCACTCATGTCTAGTAACATaGTCTCACTTGAATGATTTG +
Preference number: 2 (lower is better)
Translates to: QESSRSYHSWLQCIRGFHSCLVT*SHLNDL
Trigger: CAAATCATTCAAGTGAGACCATGTTACTAGACATGA...GTGAAACCCTCGAATACATTGAAGCCAACTATGGTAAGACCTGGAAGATTCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp ACTTCCCCAGGTAAGCCAGGTAAACTAAACCTGAAAGTGGTCAGATTAGGAGAAAGTTTTGTGAAATCATaGCCTCTTTCAAGATCATGT +
Preference number: 2 (lower is better)
Translates to: TSPGKPGKLNLKVVRLGESFVKS*PLSRSC
Trigger: ACATGATCTTGAAAGAGGCCATGATTTCACAAAACT...TTCTCCTAATCTGACCACTTTCAGGTTTAGTTTACCTGGCTTACCTGGGGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp AAAGTAGCACTAACATACCAGCTTAAATGCCCAGAAGAGGAGTGGGTTATTCTTAACAGACTGAAAAACTaGGGAGGGACACAAACTTTA +
Preference number: 2 (lower is better)
Translates to: KVALTYQLKCPEEEWVILNRLKN*GGTQTL
Trigger: TAAAGTTTGTGTCCCTCCCCAGTTTTTCAGTCTGTT...AAGAATAACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGTTAGTGCTACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp CTGATGTCTCCAGATGTGAACTGTCTTATTGTCTGGAGAGAAGGCATTTTCCAGAGGACAGAAGACTGTTaGTTATCATTTATCAAAGGT +
Preference number: 2 (lower is better)
Translates to: LMSPDVNCLIVWREGIFQRTEDC*LSFIKG
Trigger: ACCTTTGATAAATGATAACCAACAGTCTTCTGTCCT...CTGGAAAATGCCTTCTCTCCAGACAATAAGACAGTTCACATCTGGAGACATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp AGATGTCTTGGATTTCAGACACTCTTAAGACTTTGTACTTCAGGAAAGGATAAACTGAGCACAAGCAAATaGTCCTCATCAAGTAGGGTG +
Preference number: 2 (lower is better)
Translates to: RCLGFQTLLRLCTSGKDKLSTSK*SSSSRV
Trigger: CACCCTACTTGATGAGGACCATTTGCTTGTGCTCAG...TTTATCCTTTCCTGAAGTACAAAGTCTTAAGAGTGTCTGAAATCCAAGACATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp AGGCCTGAGGCTAAGAACTGTATACTTCATTTAATCCCCCTAAAAACCCTTAGAAACTGTCTTATTGTCTaGAGAGAAGGCATTTTCCAG +
Preference number: 2 (lower is better)
Translates to: RPEAKNCILHLIPLKTLRNCLIV*REGIFQ
Trigger: CTGGAAAATGCCTTCTCTCCAGACAATAAGACAGTT...TCTAAGGGTTTTTAGGGGGATTAAATGAAGTATACAGTTCTTAGCCTCAGGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp TGGTTTTATGATAGAAGATACCTTTCAAACTTCTGGCTTCTACCCATACCAGTTGTGCATTGGATCCTTTaGAATGAGAACTTCCAGTCC +
Preference number: 2 (lower is better)
Translates to: WFYDRRYLSNFWLLPIPVVHWIL*NENFQS
Trigger: GGACTGGAAGTTCTCATTCCAAAGGATCCAATGCAC...AACTGGTATGGGTAGAAGCCAGAAGTTTGAAAGGTATCTTCTATCATAAAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
3UTR-3UTR CCA 90 bp TGTAACTTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGGTGCATTGGATCCTTTaGAATGAGAACTTCCAGTCC +
Preference number: 2 (lower is better)
Translates to: CNFRKGTNFLSMCSLSLKVHWIL*NENFQS
Trigger: GGACTGGAAGTTCTCATTCCAAAGGATCCAATGCAC...CTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCCCTTCCGAAAGTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
3UTR-3UTR CCA 90 bp TGTCCCACCAAGCAGCTACTCTTAGGGATGCTCAATTTTAGGAACTATGGTTTTTTCTACAAAGTGCATTaGATCCTTTGGAATGAGAAC +
Preference number: 2 (lower is better)
Translates to: CPTKQLLLGMLNFRNYGFFYKVH*ILWNEN
Trigger: GTTCTCATTCCAAAGGATCCAATGCACTTTGTAGAA...AAAACCATAGTTCCTAAAATTGAGCATCCCTAAGAGTAGCTGCTTGGTGGGACA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp CCACGTCTTTACAGGAATCTTCCAGGTCTTACCATAGTTGGCTTCAATGTATTCTTCTACAAAGTGCATTaGATCCTTTGGAATGAGAAC +
Preference number: 2 (lower is better)
Translates to: PRLYRNLPGLTIVGFNVFFYKVH*ILWNEN
Trigger: GTTCTCATTCCAAAGGATCCAATGCACTTTGTAGAA...GAATACATTGAAGCCAACTATGGTAAGACCTGGAAGATTCCTGTAAAGACGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
3UTR-3UTR CCA 90 bp TTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTCCATTCTTCTACAAAGTGCATTaGATCCTTTGGAATGAGAAC +
Preference number: 2 (lower is better)
Translates to: LFSKKSTSPFPQTFRFPFFYKVH*ILWNEN
Trigger: GTTCTCATTCCAAAGGATCCAATGCACTTTGTAGAA...GAATGGAAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000642537.1
ENST00000645933.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp ATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCAATAAACCTAGAGTGTaGTACTTCTTCTACAAAGTG +
Preference number: 2 (lower is better)
Translates to: MYSRVSQGTWTFMSTNSVNKPRV*YFFYKV
Trigger: CACTTTGTAGAAGAAGTACCACACTCTAGGTTTATT...GACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp CCTGAGGCTAAGAACTGTATACTTCATTTAATCCCCCTAAAAACCCTTAGAAGTACATCATCTTTTCCCTaGAAGGATAGTTCCAAGCTG +
Preference number: 2 (lower is better)
Translates to: PEAKNCILHLIPLKTLRSTSSFP*KDSSKL
Trigger: CAGCTTGGAACTATCCTTCCAGGGAAAAGATGATGT...ACTTCTAAGGGTTTTTAGGGGGATTAAATGAAGTATACAGTTCTTAGCCTCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp TTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGTACCTTTCAAACTTCTaGCTTCTACCCATACCAGTT +
Preference number: 2 (lower is better)
Translates to: FPFLRLLLFSGVRGKSAKYLSNF*LLPIPV
Trigger: AACTGGTATGGGTAGAAGCCAGAAGTTTGAAAGGTA...CTTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
3UTR-3UTR CCA 90 bp CCACGTCTTTACAGGAATCTTCCAGGTCTTACCATAGTTGGCTTCAATGTATTCTATCTTTCAAACTTCTaGCTTCTACCCATACCAGTT +
Preference number: 2 (lower is better)
Translates to: PRLYRNLPGLTIVGFNVFYLSNF*LLPIPV
Trigger: AACTGGTATGGGTAGAAGCCAGAAGTTTGAAAGATA...GAATACATTGAAGCCAACTATGGTAAGACCTGGAAGATTCCTGTAAAGACGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp AAGATACGAAGTTTCAGACAGCACTTTAATCAGGTGAACAATGTGAATATCAACTTTTCGTATCCCTCGTaGACACAGCTTTCTTGGCAG +
Preference number: 2 (lower is better)
Translates to: KIRSFRQHFNQVNNVNINFSYPS*TQLSWQ
Trigger: CTGCCAAGAAAGCTGTGTCCACGAGGGATACGAAAA...GTTGATATTCACATTGTTCACCTGATTAAAGTGCTGTCTGAAACTTCGTATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675232.1
ENST00000676192.1
3UTR CAA 90 bp AGGTATTTGTCTCATTCATCTAGGCTTCTCCACTGTAACCTAGCATaGTATGTGGCACATGAAAATTCCTCAGTACTAAGTGAGAGAATT +
Preference number: 2 (lower is better)
Translates to: RYLSHSSRLLHCNLA*YVAHENSSVLSERI
Trigger: AATTCTCTCACTTAGTACTGAGGAATTTTCATGTGCCACATACAATGCTAGGTTACAGTGGAGAAGCCTAGATGAATGAGACAAATACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp ATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTCCATGAGAATTACATCAGATaGCTCTTTCTGTGTCTTCAA +
Preference number: 2 (lower is better)
Translates to: ICFRKSLPAHSLRHSGFHENYIR*LFLCLQ
Trigger: TTGAAGACACAGAAAGAGTCATCTGATGTAATTCTC...ATGGAAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp TGTAGGGAAGAATATAGAACCTGTGTCAATTGGGCCAAGATGTCTTGGATTTCAGAGAATTACATCAGATaGCTCTTTCTGTGTCTTCAA +
Preference number: 2 (lower is better)
Translates to: CREEYRTCVNWAKMSWISENYIR*LFLCLQ
Trigger: TTGAAGACACAGAAAGAGTCATCTGATGTAATTCTC...TGAAATCCAAGACATCTTGGCCCAATTGACACAGGTTCTATATTCTTCCCTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp CTGCTGAAAGAATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGATTGTATGTGGCACATaGAAATTCCTCAGTACTAAG +
Preference number: 2 (lower is better)
Translates to: LLKECSSFFIPTLNKPRVIVCGT*KFLSTK
Trigger: CTTAGTACTGAGGAATTTTCATGTGCCACATACAAT...CACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTCTTTCAGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
3UTR-3UTR TCA 90 bp CCTGAGGCTAAGAACTGTATACTTCATTTAATCCCCCTAAAAACCCTTAGAAGTTGCATTTCTAAATACTaGGCACAAGCAAATGGTCCT +
Preference number: 2 (lower is better)
Translates to: PEAKNCILHLIPLKTLRSCISKY*AQANGP
Trigger: AGGACCATTTGCTTGTGCTCAGTATTTAGAAATGCA...ACTTCTAAGGGTTTTTAGGGGGATTAAATGAAGTATACAGTTCTTAGCCTCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp TCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCTACAAAGTGCTCATTCTTCCATAGGTaGTACTGCAGTGCAAATGCA +
Preference number: 2 (lower is better)
Translates to: SLYLHSINLECGTSSTKCSFFHR*YCSANA
Trigger: TGCATTTGCACTGCAGTATCACCTATGGAAGAATGA...GCACTTTGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000676192.1
ENST00000676371.1
3UTR-3UTR TCA 90 bp TCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTCATTCTTCCATAGGTaGTACTGCAGTGCAAATGCA +
Preference number: 2 (lower is better)
Translates to: SKVFMLLYKSGMGGCKLLSFFHR*YCSANA
Trigger: TGCATTTGCACTGCAGTATCACCTATGGAAGAATGA...AAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000642537.1
ENST00000645933.1
3UTR-3UTR TCA 90 bp AATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCTACCCATACCAGTTaGTTCAAAATGGGAAGGAAA +
Preference number: 2 (lower is better)
Translates to: NARASLYLHSINLECGTSSTHTS*FKMGRK
Trigger: TTTCCTTCCCATTTTGAATCAACTGGTATGGGTAGA...AGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp GCAAATGCAGTAAAGTCTCTTGGAACACAGAAAAACTTGCATTGTGAAGTAGAGTCTACCCATACCAGTTaGTTCAAAATGGGAAGGAAA +
Preference number: 2 (lower is better)
Translates to: ANAVKSLGTQKNLHCEVESTHTS*FKMGRK
Trigger: TTTCCTTCCCATTTTGAATCAACTGGTATGGGTAGA...CTCTACTTCACAATGCAAGTTTTTCTGTGTTCCAAGAGACTTTACTGCATTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
3UTR-3UTR TCA 90 bp AGGTTTGGGAATGTTGTCAGAATGTTGTTGGTTAATACCGATAAAGGAAAACCTAGCAATGATCTAAAATaGCCACTGCTTGGTGATCTG +
Preference number: 2 (lower is better)
Translates to: RFGNVVRMLLVNTDKGKPSNDLK*PLLGDL
Trigger: CAGATCACCAAGCAGTGGTCATTTTAGATCATTGCT...AGGTTTTCCTTTATCGGTATTAACCAACAACATTCTGACAACATTCCCAAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674767.1
3UTR-3UTR GCA 90 bp ATTTATCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTACATACCAGCTTAAATaGCCAGAAGAGGAGTGGGTT +
Preference number: 2 (lower is better)
Translates to: IYQRFSCCFTNPEWVVVSTYQLK*PEEEWV
Trigger: AACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGT...ACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGATAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR GCA 90 bp CATTTCAACCTACTATCTCAATATAACTGGATAACCTCATCCCACTCAGAAATAACATACCAGCTTAAATaGCCAGAAGAGGAGTGGGTT +
Preference number: 2 (lower is better)
Translates to: HFNLLSQYNWITSSHSEITYQLK*PEEEWV
Trigger: AACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGT...TATTTCTGAGTGGGATGAGGTTATCCAGTTATATTGAGATAGTAGGTTGAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR GCA 90 bp ATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTCCATCAAAGGTTTTCATGTTaGTTTACAAATCCGGAATGG +
Preference number: 2 (lower is better)
Translates to: ICFRKSLPAHSLRHSGFHQRFSC*FTNPEW
Trigger: CCATTCCGGATTTGTAAAGCAACATGAAAACCTTTG...ATGGAAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR GCA 90 bp AGGCCTGAGGCTAAGAACTGTATACTTCATTTAATCCCCCTAAAAACCCTTAGACAAAGGTTTTCATGTTaGTTTACAAATCCGGAATGG +
Preference number: 2 (lower is better)
Translates to: RPEAKNCILHLIPLKTLRQRFSC*FTNPEW
Trigger: CCATTCCGGATTTGTAAAGCAACATGAAAACCTTTG...TCTAAGGGTTTTTAGGGGGATTAAATGAAGTATACAGTTCTTAGCCTCAGGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR GCA 90 bp CGACCAAACTGTAACTTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAATACTGCAGTGCAAATaGAGTAAAGTCTCTTGGAAC +
Preference number: 2 (lower is better)
Translates to: RPNCNFRKGTNFLSMCSLILQCK*SKVSWN
Trigger: GTTCCAAGAGACTTTACTGCATTTGCACTGCAGTAT...TAAAGAACACATTGACAGGAAATTTGTTCCCTTCCGAAAGTTACAGTTTGGTCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000676192.1
ENST00000676371.1
3UTR-3UTR GCA 90 bp CAGAATGGTACTCCCAATTTGTTTAATGTTTTCGCTGCTAGTTGCAGTAATTCCGTACTGCTGAAAGAATaGTCGAGCTTCTTTATACCT +
Preference number: 2 (lower is better)
Translates to: QNGTPNLFNVFAASCSNSVLLKE*SSFFIP
Trigger: AGGTATAAAGAAGCTCGAGCATTCTTTCAGCAGTAC...GGAATTACTGCAACTAGCAGCGAAAACATTAAACAAATTGGGAGTACCATTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
3UTR-3UTR CCA 90 bp CCACGTCTTTACAGGAATCTTCCAGGTCTTACCATAGTTGGCTTCAATGTATTCTCATGTCTAGTAACATaGTCTCACTTGAATGATTTG +
Preference number: 2 (lower is better)
Translates to: PRLYRNLPGLTIVGFNVFSCLVT*SHLNDL
Trigger: CAAATCATTCAAGTGAGACCATGTTACTAGACATGA...GAATACATTGAAGCCAACTATGGTAAGACCTGGAAGATTCCTGTAAAGACGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp CATGAAGTCTTTTCTAAATCTACATGGTCCATCTTCTATAGTGGCTTTATCCTAAGTGGATCGCATGAGTaGCCAGTTTGCAGATATAGT +
Preference number: 2 (lower is better)
Translates to: HEVFSKSTWSIFYSGFILSGSHE*PVCRYS
Trigger: ACTATATCTGCAAACTGGCCACTCATGCGATCCACT...TAGGATAAAGCCACTATAGAAGATGGACCATGTAGATTTAGAAAAGACTTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
3UTR-3UTR CCA 90 bp TTCATGAAGTCTTTTCTAAATCTACATGGTCCATCTTCTATAGTGGCTTTATCCAGTGGATCGCATGAGTaGCCAGTTTGCAGATATAGT +
Preference number: 2 (lower is better)
Translates to: FMKSFLNLHGPSSIVALSSGSHE*PVCRYS
Trigger: ACTATATCTGCAAACTGGCCACTCATGCGATCCACT...GGATAAAGCCACTATAGAAGATGGACCATGTAGATTTAGAAAAGACTTCATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
3UTR-3UTR CCA 90 bp CTGGATCTTTTCTTTATGCCAGGTACAGTAGATACTGGGCCAACACAGGTAAATAATAAACCTAGAGTGTaGTACTTCTTCTACAAAGTG +
Preference number: 2 (lower is better)
Translates to: LDLFFMPGTVDTGPTQVNNKPRV*YFFYKV
Trigger: CACTTTGTAGAAGAAGTACCACACTCTAGGTTTATT...ATTTACCTGTGTTGGCCCAGTATCTACTGTACCTGGCATAAAGAAAAGATCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
3UTR-3UTR CCA 90 bp TGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCGTTTCACAGGGTACATaGACCTTCATGTCTACAAAC +
Preference number: 2 (lower is better)
Translates to: CKLLSLICFRKSLPAHSLVSQGT*TFMSTN
Trigger: GTTTGTAGACATGAAGGTCCATGTACCCTGTGAAAC...GAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp ATCTTAAAAGTAGCACTAACATACCAGCTTAAATGCCCAGAAGAGGAGTGGGTTTATCTTTCAAACTTCTaGCTTCTACCCATACCAGTT +
Preference number: 2 (lower is better)
Translates to: ILKVALTYQLKCPEEEWVYLSNF*LLPIPV
Trigger: AACTGGTATGGGTAGAAGCCAGAAGTTTGAAAGATA...AACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGTTAGTGCTACTTTTAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp CGACCAAACTGTAACTTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAGAGAATTACATCAGATaGCTCTTTCTGTGTCTTCAA +
Preference number: 2 (lower is better)
Translates to: RPNCNFRKGTNFLSMCSLENYIR*LFLCLQ
Trigger: TTGAAGACACAGAAAGAGTCATCTGATGTAATTCTC...TAAAGAACACATTGACAGGAAATTTGTTCCCTTCCGAAAGTTACAGTTTGGTCG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
3UTR-3UTR TCA 90 bp AAAAGAAGTAGGTATTTGTCTCATTCATCTAGGCTTCTCCACTGTAACCTAGCACAAAGTCTGATCACTTaGATATTAACTCAGACTCCA +
Preference number: 2 (lower is better)
Translates to: KRSRYLSHSSRLLHCNLAQSLIT*ILTQTP
Trigger: TGGAGTCTGAGTTAATATTCAAGTGATCAGACTTTG...TGCTAGGTTACAGTGGAGAAGCCTAGATGAATGAGACAAATACCTACTTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp TGGTTTTATGATAGAAGATACCTTTCAAACTTCTGGCTTCTACCCATACCAGTTTCTACCCATACCAGTTaGTTCAAAATGGGAAGGAAA +
Preference number: 2 (lower is better)
Translates to: WFYDRRYLSNFWLLPIPVSTHTS*FKMGRK
Trigger: TTTCCTTCCCATTTTGAATCAACTGGTATGGGTAGA...AACTGGTATGGGTAGAAGCCAGAAGTTTGAAAGGTATCTTCTATCATAAAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
3UTR-3UTR GCA 90 bp ATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCTACAAAGTGCATTGGTCTAACCTGAAAGAATaGTCGAGCTTCTTTATACCT +
Preference number: 2 (lower is better)
Translates to: IPTLNKPRVWYFFYKVHWSNLKE*SSFFIP
Trigger: AGGTATAAAGAAGCTCGAGCATTCTTTCAGGTTAGA...CCAATGCACTTTGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
3UTR-3UTR CCA 90 bp ATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTCCATTCATGTCTAGTAACATaGTCTCACTTGAATGATTTG +
Preference number: 2 (lower is better)
Translates to: ICFRKSLPAHSLRHSGFHSCLVT*SHLNDL
Trigger: CAAATCATTCAAGTGAGACCATGTTACTAGACATGA...ATGGAAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp ATTTATCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTGATATAAGAGAGAGATaGGGTAAACAGCATCCTAGC +
Preference number: 2 (lower is better)
Translates to: IYQRFSCCFTNPEWVVVSDIRER*GKQHPS
Trigger: GCTAGGATGCTGTTTACCCCATCTCTCTCTTATATC...ACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGATAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp GTTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAATTTACAAATCCGGAATaGGTGGTTGTAAGTTACTTT +
Preference number: 2 (lower is better)
Translates to: VSILETTIVLWCQRKICQFTNPE*VVVSYF
Trigger: AAAGTAACTTACAACCACCCATTCCGGATTTGTAAA...TTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp TGTAGGGAAGAATATAGAACCTGTGTCAATTGGGCCAAGATGTCTTGGATTTCAAGGACAGAAGACTGTTaGTTATCATTTATCAAAGGT +
Preference number: 2 (lower is better)
Translates to: CREEYRTCVNWAKMSWISRTEDC*LSFIKG
Trigger: ACCTTTGATAAATGATAACCAACAGTCTTCTGTCCT...TGAAATCCAAGACATCTTGGCCCAATTGACACAGGTTCTATATTCTTCCCTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp AGGCCTGAGGCTAAGAACTGTATACTTCATTTAATCCCCCTAAAAACCCTTAGAAGGACAGAAGACTGTTaGTTATCATTTATCAAAGGT +
Preference number: 2 (lower is better)
Translates to: RPEAKNCILHLIPLKTLRRTEDC*LSFIKG
Trigger: ACCTTTGATAAATGATAACCAACAGTCTTCTGTCCT...TCTAAGGGTTTTTAGGGGGATTAAATGAAGTATACAGTTCTTAGCCTCAGGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp ACCAGGGCTCAATATCACACTATTGATGAGATTTCACCTTTTATTCCTTCTAAAGAGGCAGACAGAATCTaGTCTTACCAAATTATCAGC +
Preference number: 2 (lower is better)
Translates to: TRAQYHTIDEISPFIPSKEADRI*SYQIIS
Trigger: GCTGATAATTTGGTAAGACCAGATTCTGTCTGCCTC...TTTAGAAGGAATAAAAGGTGAAATCTCATCAATAGTGTGATATTGAGCCCTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674767.1
3UTR-3UTR TCA 90 bp ATTTGTTTAATGTTTTCGCTGCTAGTTGCAGTAATTCCTTTGCACTCTTCCGAAGAGAATTACATCAGATaGCTCTTTCTGTGTCTTCAA +
Preference number: 2 (lower is better)
Translates to: ICLMFSLLVAVIPLHSSEENYIR*LFLCLQ
Trigger: TTGAAGACACAGAAAGAGTCATCTGATGTAATTCTC...TTCGGAAGAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAACATTAAACAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
3UTR-3UTR TCA 90 bp TCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTATTGTATGTGGCACATaGAAATTCCTCAGTACTAAG +
Preference number: 2 (lower is better)
Translates to: SKVFMLLYKSGMGGCKLLIVCGT*KFLSTK
Trigger: CTTAGTACTGAGGAATTTTCATGTGCCACATACAAT...AAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp TGTACTTTCTCTGACTGCTCTCTCTATTTACTAAAAGGTTTGGGAATGTTGTCAAACCTTTTATCCAACTaGAGCTACTACGGCTTTAAA +
Preference number: 2 (lower is better)
Translates to: CTFSDCSLYLLKGLGMLSNLLSN*SYYGFK
Trigger: TTTAAAGCCGTAGTAGCTTCAGTTGGATAAAAGGTT...TGACAACATTCCCAAACCTTTTAGTAAATAGAGAGAGCAGTCAGAGAAAGTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674767.1
3UTR-3UTR CCA 90 bp TCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTTCATGTCTAGTAACATaGTCTCACTTGAATGATTTG +
Preference number: 2 (lower is better)
Translates to: SNLFSKKSTSPFPQTFRFSCLVT*SHLNDL
Trigger: CAAATCATTCAAGTGAGACCATGTTACTAGACATGA...AAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp TCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTAGTTTTGTGAAATCATaGCCTCTTTCAAGATCATGT +
Preference number: 2 (lower is better)
Translates to: SNLFSKKSTSPFPQTFRFSFVKS*PLSRSC
Trigger: ACATGATCTTGAAAGAGGCCATGATTTCACAAAACT...AAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp CCTGAGGCTAAGAACTGTATACTTCATTTAATCCCCCTAAAAACCCTTAGAAGTTTTACAAATCCGGAATaGGTGGTTGTAAGTTACTTT +
Preference number: 2 (lower is better)
Translates to: PEAKNCILHLIPLKTLRSFTNPE*VVVSYF
Trigger: AAAGTAACTTACAACCACCCATTCCGGATTTGTAAA...ACTTCTAAGGGTTTTTAGGGGGATTAAATGAAGTATACAGTTCTTAGCCTCAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CCA 90 bp CACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATGAATACCTTTCAAACTTCTaGCTTCTACCCATACCAGTT +
Preference number: 2 (lower is better)
Translates to: HRTYTKGIAIELVCFTYEYLSNF*LLPIPV
Trigger: AACTGGTATGGGTAGAAGCCAGAAGTTTGAAAGGTA...TTCATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642952.1
3UTR CAA 90 bp TATTTTACAGCTGAGAAAAAGAATTGTGGTAACAGGGTAGCAAGATaGGAAATGGATGATGCTAAACGAAACAATAAGCTGTCAAATAGG +
Preference number: 2 (lower is better)
Translates to: YFTAEKKNCGNRVAR*EMDDAKRNNKLSNR
Trigger: CCTATTTGACAGCTTATTGTTTCGTTTAGCATCATCCATTTCCAATCTTGCTACCCTGTTACCACAATTCTTTTTCTCAGCTGTAAAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676310.1
3UTR-3UTR TCA 90 bp ATTTATCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTATTGTATGTGGCACATaGAAATTCCTCAGTACTAAG +
Preference number: 2 (lower is better)
Translates to: IYQRFSCCFTNPEWVVVSIVCGT*KFLSTK
Trigger: CTTAGTACTGAGGAATTTTCATGTGCCACATACAAT...ACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGATAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR TCA 90 bp TTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCTACAAAGTGCAAAGTCTGATCACTTaGATATTAACTCAGACTCCA +
Preference number: 2 (lower is better)
Translates to: FFIPTLNKPRVWYFFYKVQSLIT*ILTQTP
Trigger: TGGAGTCTGAGTTAATATTCAAGTGATCAGACTTTG...CACTTTGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
3UTR-3UTR GCA 90 bp TTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCTACAAAGTGCATTTCTAACCTGAAAGAATaGTCGAGCTTCTTTATACCT +
Preference number: 2 (lower is better)
Translates to: LYLHSINLECGTSSTKCISNLKE*SSFFIP
Trigger: AGGTATAAAGAAGCTCGAGCATTCTTTCAGGTTAGA...AATGCACTTTGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
3UTR-3UTR CCA 90 bp ATTTATCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTAGTTTTGTGAAATCATaGCCTCTTTCAAGATCATGT +
Preference number: 2 (lower is better)
Translates to: IYQRFSCCFTNPEWVVVSSFVKS*PLSRSC
Trigger: ACATGATCTTGAAAGAGGCCATGATTTCACAAAACT...ACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGATAAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR CCA 72 bp CTATCCGAAACCAGCCTTCCTGTAGTCCCAGCTACTTaGGGGTCTGAGCCAGGAGGATCACTTGAACCTGAG +
Preference number: 3 (lower is better)
Translates to: LSETSLPVVPAT*GSEPGGSLEPE
Trigger: CTCAGGTTCAAGTGATCCTCCTGGCTCAGACCCCCAAGTAGCTGGGACTACAGGAAGGCTGGTTTCGGATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602526.1
3UTR-3UTR CAA 90 bp ATGGACCTAGGGAATAGCCCTATCCAGGCCCTGGAAAAGGGTTCATGGTCATTTCCTGAGGTCAGGGGCTaGAGACCAACCTGGCCAACA +
Preference number: 3 (lower is better)
Translates to: MDLGNSPIQALEKGSWSFPEVRG*RPTWPT
Trigger: TGTTGGCCAGGTTGGTCTCAAGCCCCTGACCTCAGG...AAATGACCATGAACCCTTTTCCAGGGCCTGGATAGGGCTATTCCCTAGGTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676310.1
3UTR GCA 72 bp TCATCCCACTCAGAAATAGGCCAGATTCCATTGGGTTaGACATTGGGAGGAGAGCGCTTCCAGTCCCACGTC +
Preference number: 3 (lower is better)
Translates to: SSHSEIGQIPLG*TLGGERFQSHV
Trigger: GACGTGGGACTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATGGAATCTGGCCTATTTCTGAGTGGGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp ACAGCAAACTCCCTTAGGACAGGAAGAGCGGTCAAGTTTAAGCACAAAACTCCAGCTACGAAGGCCCACTaGGGCTGTCAGGCCTCAGCT +
Preference number: 3 (lower is better)
Translates to: TANSLRTGRAVKFKHKTPATKAH*GCQASA
Trigger: AGCTGAGGCCTGACAGCCCAAGTGGGCCTTCGTAGC...TGGAGTTTTGTGCTTAAACTTGACCGCTCTTCCTGTCCTAAGGGAGTTTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
3UTR-3UTR CAA 90 bp GTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATTATCCTTCCTTAGCTTaGCCTGGTGAGCTCATCTTC +
Preference number: 3 (lower is better)
Translates to: VAVPEVVATPLMKDYQVDYPSLA*PGELIF
Trigger: GAAGATGAGCTCACCAGGCAAAGCTAAGGAAGGATA...ATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
3UTR CCA 72 bp GGGAATAGCCCTATCCAGGCCCTGGAAAAGGGTTCATaGTCATTTGAACAGAAATTCAGGGGTCCCAGGTTC +
Preference number: 3 (lower is better)
Translates to: GNSPIQALEKGS*SFEQKFRGPRF
Trigger: GAACCTGGGACCCCTGAATTTCTGTTCAAATGACCATGAACCCTTTTCCAGGGCCTGGATAGGGCTATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676310.1
3UTR-3UTR CAA 90 bp CTAAGCGGCAGAAACACCCTGAGACTTAGCCTCAATGAAGCACTGGATGCCTTCTATCCTTCCTTAGCTTaGCCTGGTGAGCTCATCTTC +
Preference number: 3 (lower is better)
Translates to: LSGRNTLRLSLNEALDAFYPSLA*PGELIF
Trigger: GAAGATGAGCTCACCAGGCAAAGCTAAGGAAGGATA...GAAGGCATCCAGTGCTTCATTGAGGCTAAGTCTCAGGGTGTTTCTGCCGCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp GGAGACATTCATGGGTGCCTAACTACCAACAAGTTGTCAACTTCCCCAGGTAAGCAGGCATTTAGCAGGTaGGTGCTGATGGTTCCCTTG +
Preference number: 3 (lower is better)
Translates to: GDIHGCLTTNKLSTSPGKQAFSR*VLMVPL
Trigger: CAAGGGAACCATCAGCACCAACCTGCTAAATGCCTG...CTTACCTGGGGAAGTTGACAACTTGTTGGTAGTTAGGCACCCATGAATGTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp GGCCCACTTGGGCTGTCAGGCCTCAGCTTTAGGTGCCAGTACACTGTATTAGAGGTGGGTCTTGGGCACTaGACAGTTATATACTTCATT +
Preference number: 3 (lower is better)
Translates to: GPLGLSGLSFRCQYTVLEVGLGH*TVIYFI
Trigger: AATGAAGTATATAACTGTCAAGTGCCCAAGACCCAC...CTCTAATACAGTGTACTGGCACCTAAAGCTGAGGCCTGACAGCCCAAGTGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
3UTR-3UTR CAA 90 bp AAGTCACTGAGACTTTGGGGTTGTTTGTCACACCGCCACCCACCTTACCCACCTAGGGTTCATGGTCATTaGAACAGAAATTCAGGGGTC +
Preference number: 3 (lower is better)
Translates to: KSLRLWGCLSHRHPPYPPRVHGH*NRNSGV
Trigger: GACCCCTGAATTTCTGTTCAAATGACCATGAACCCT...AGGTGGGTAAGGTGGGTGGCGGTGTGACAAACAACCCCAAAGTCTCAGTGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676310.1
3UTR TCA 72 bp CCCTATCCAGGCCCTGGAAAAGGGTTCATGGTCATTTaGACAGAAATTCAGGGGTCCCAGGTTCCCAGAATA +
Preference number: 3 (lower is better)
Translates to: PYPGPGKGFMVI*TEIQGSQVPRI
Trigger: TATTCTGGGAACCTGGGACCCCTGAATTTCTGTTCAAATGACCATGAACCCTTTTCCAGGGCCTGGATAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676310.1
3UTR CCA 72 bp GGAGAGAAGGACAAGTGCTCCCTGCTTAGAGAGGACTaGGTGACTACCTGGTTGTCCTGGTTATCAATTAAG +
Preference number: 3 (lower is better)
Translates to: GEKDKCSLLRED*VTTWLSWLSIK
Trigger: CTTAATTGATAACCAGGACAACCAGGTAGTCACCCAGTCCTCTCTAAGCAGGGAGCACTTGTCCTTCTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp AGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATCTTCAACTTTTTGCTaGCGTACCGTGGAAGTAAAG +
Preference number: 3 (lower is better)
Translates to: SGRARGSCHSSHERLPSGSSTFC*RTVEVK
Trigger: CTTTACTTCCACGGTACGCAAGCAAAAAGTTGAAGA...TCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374705.5
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
3UTR-3UTR CAA 90 bp CAAGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGTCTTCAACTTTTTGCTaGCGTACCGTGGAAGTAAAG +
Preference number: 3 (lower is better)
Translates to: QVAVPEVVATPLMKDYQVSSTFC*RTVEVK
Trigger: CTTTACTTCCACGGTACGCAAGCAAAAAGTTGAAGA...CACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCCACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374705.5
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
3UTR-3UTR CAA 90 bp AGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGAGGAACACAGAAAAACTaGCATTGTGAAGTAGAGCCA +
Preference number: 3 (lower is better)
Translates to: SGRARGSCHSSHERLPSGGTQKN*HCEVEP
Trigger: TGGCTCTACTTCACAATGCAAGTTTTTCTGTGTTCC...TCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000676192.1
ENST00000676371.1
3UTR TCA 72 bp AGAAGGACAAGTGCTCCCTGCTTAGAGAGGACTGGGTaGCTACCTGGTTGTCCTGGTTATCAATTAAGAGGA +
Preference number: 3 (lower is better)
Translates to: RRTSAPCLERTG*LPGCPGYQLRG
Trigger: TCCTCTTAATTGATAACCAGGACAACCAGGTAGTCACCCAGTCCTCTCTAAGCAGGGAGCACTTGTCCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR TCA 72 bp CCAGCCTGGGCAACCTGTCTCTCATTCTTCCATAGGTaGTACTGCAGTGCAAATGCAGTAAAGTCTCTTGGA +
Preference number: 3 (lower is better)
Translates to: PAWATCLSFFHR*YCSANAVKSLG
Trigger: TCCAAGAGACTTTACTGCATTTGCACTGCAGTATCACCTATGGAAGAATGAGAGACAGGTTGCCCAGGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675232.1
3UTR GCA 72 bp GAAAGACTACCAAGTGGATCGCATGAGTGGCCAGTTTaGAGATATAGTGCAGGGGGATTTCAGTTCCAGAGA +
Preference number: 3 (lower is better)
Translates to: ERLPSGSHEWPV*RYSAGGFQFQR
Trigger: TCTCTGGAACTGAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
3UTR CCA 72 bp AAGTGCTCCCTGCTTAGAGAGGACTGGGTGACTACCTaGTTGTCCTGGTTATCAATTAAGAGGAATCTTGCC +
Preference number: 3 (lower is better)
Translates to: KCSLLREDWVTT*LSWLSIKRNLA
Trigger: GGCAAGATTCCTCTTAATTGATAACCAGGACAACCAGGTAGTCACCCAGTCCTCTCTAAGCAGGGAGCACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR CCA 72 bp TCCTCTCATGAAAGACTACCAAGTGGATCGCATGAGTaGCCAGTTTGCAGATATAGTGCAGGGGGATTTCAG +
Preference number: 3 (lower is better)
Translates to: SSHERLPSGSHE*PVCRYSAGGFQ
Trigger: CTGAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTCTTTCATGAGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
3UTR-3UTR CAA 90 bp AGAGCGCTTCCAGTCCCACGTCTTTACAGGAATCTTCCAGGTCTTACCATAGTTTATCCTTCCTTAGCTTaGCCTGGTGAGCTCATCTTC +
Preference number: 3 (lower is better)
Translates to: RALPVPRLYRNLPGLTIVYPSLA*PGELIF
Trigger: GAAGATGAGCTCACCAGGCAAAGCTAAGGAAGGATA...AACTATGGTAAGACCTGGAAGATTCCTGTAAAGACGTGGGACTGGAAGCGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp GTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTCAGTTCCTCTTCAACTTTTTGCTaGCGTACCGTGGAAGTAAAG +
Preference number: 3 (lower is better)
Translates to: VDRMSGQFADIVQGDFSSSSTFC*RTVEVK
Trigger: CTTTACTTCCACGGTACGCAAGCAAAAAGTTGAAGA...GGAACTGAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000374705.5
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
3UTR-3UTR CAA 90 bp CTCTCAGGATGTCTCTGGAGACATTCATGGGTGCCTAACTACCAACAAGTTGTCAAACCTGTACAGAACTaGAACTCTTCAAAGGGTGGG +
Preference number: 3 (lower is better)
Translates to: LSGCLWRHSWVPNYQQVVKPVQN*NSSKGG
Trigger: CCCACCCTTTGAAGAGTTCAAGTTCTGTACAGGTTT...GACAACTTGTTGGTAGTTAGGCACCCATGAATGTCTCCAGAGACATCCTGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp GGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGTGCCAGAGGTATCCTTCCTTAGCTTaGCCTGGTGAGCTCATCTTC +
Preference number: 3 (lower is better)
Translates to: GTNFLSMCSLSLKWPCQRYPSLA*PGELIF
Trigger: GAAGATGAGCTCACCAGGCAAAGCTAAGGAAGGATA...CCTCTGGCACGGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
3UTR-3UTR CAA 90 bp ACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTGCTGAAAGTTGCAGTAATTCCTTaGCACTCTTCCGAAAGGCCA +
Preference number: 3 (lower is better)
Translates to: TLPKGHSFHSVIIKVLLKVAVIP*HSSERP
Trigger: TGGCCTTTCGGAAGAGTGCAAAGGAATTACTGCAAC...TTTCAGCAGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
3UTR-3UTR CAA 90 bp CGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACACACAATGAAGTTGAATaGAGGCAGAACTCATGGTCT +
Preference number: 3 (lower is better)
Translates to: RGFHRVHGPSCLQTQSSTHNEVE*RQNSWS
Trigger: AGACCATGAGTTCTGCCTCAATTCAACTTCATTGTG...TGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642177.1
ENST00000642537.1
ENST00000644273.1
3UTR GCA 72 bp GTGGAGGAGAGGGCAGCCCAGACAAATACAACTGTGTaGTTTGAACATGGGAATAGTATGTTTAGTCACAGG +
Preference number: 3 (lower is better)
Translates to: VEERAAQTNTTV*FEHGNSMFSHR
Trigger: CCTGTGACTAAACATACTATTCCCATGTTCAAAGCACACAGTTGTATTTGTCTGGGCTGCCCTCTCCTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676310.1
3UTR CCA 72 bp CTCAGAACTGAGAATAGACCAGCTGTATCATCAACTTaGACTGACAAACCCAGGGACACTTCCTCCTCACAA +
Preference number: 3 (lower is better)
Translates to: LRTENRPAVSST*TDKPRDTSSSQ
Trigger: TTGTGAGGAGGAAGTGTCCCTGGGTTTGTCAGTCCAAGTTGATGATACAGCTGGTCTATTCTCAGTTCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675668.1
3UTR-3UTR CAA 90 bp GACCTCTCTGTCGCCTTAGGTTCTCAATCTGAACAAAAAGATACTAAGCGGCAGAAACCTGTACAGAACTaGAACTCTTCAAAGGGTGGG +
Preference number: 3 (lower is better)
Translates to: DLSVALGSQSEQKDTKRQKPVQN*NSSKGG
Trigger: CCCACCCTTTGAAGAGTTCAAGTTCTGTACAGGTTT...CTGCCGCTTAGTATCTTTTTGTTCAGATTGAGAACCTAAGGCGACAGAGAGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp CGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACATCTCACTTGAATGATTaGTCAACAAGTGCCATCAGA +
Preference number: 3 (lower is better)
Translates to: RGFHRVHGPSCLQTQSSTSHLND*STSAIR
Trigger: TCTGATGGCACTTGTTGACAAATCATTCAAGTGAGA...TGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp GGGATGGGTAAGATCTCCTGGCAAAGAATGGGAGTCCCAATTGGAAATGGGGAGGTAACATGGTCTCACTaGAATGATTTGTCAACAAGT +
Preference number: 3 (lower is better)
Translates to: GMGKISWQRMGVPIGNGEVTWSH*NDLSTS
Trigger: ACTTGTTGACAAATCATTCAAGTGAGACCATGTTAC...CTCCCCATTTCCAATTGGGACTCCCATTCTTTGCCAGGAGATCTTACCCATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp CTAAGCGGCAGAAACACCCTGAGACTTAGCCTCAATGAAGCACTGGATGCCTTCTTCAGGTTTCCATTCTaGAGACTACTATTGTTCTCT +
Preference number: 3 (lower is better)
Translates to: LSGRNTLRLSLNEALDAFFRFPF*RLLLFS
Trigger: AGAGAACAATAGTAGTCTCAAGAATGGAAACCTGAA...GAAGGCATCCAGTGCTTCATTGAGGCTAAGTCTCAGGGTGTTTCTGCCGCTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp GATCTAGCCCAGGTCTTAATGATAGTGGAAGACAAGGAGGAAAGAGGGAACGTTTTTTATGGCAACACATaGCCTTCCCTGAGTGAGATG +
Preference number: 3 (lower is better)
Translates to: DLAQVLMIVEDKEERGNVFYGNT*PSLSEM
Trigger: CATCTCACTCAGGGAAGGCAATGTGTTGCCATAAAA...AACGTTCCCTCTTTCCTCCTTGTCTTCCACTATCATTAAGACCTGGGCTAGATC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp CTAGCCCAGGTCTTAATGATAGTGGAAGACAAGGAGGAAAGAGGGAACGTTGCTGGAAAGGCTAGAATATaGAAAAAGAAGTCCAGGGGA +
Preference number: 3 (lower is better)
Translates to: LAQVLMIVEDKEERGNVAGKARI*KKKSRG
Trigger: TCCCCTGGACTTCTTTTTCAATATTCTAGCCTTTCC...AGCAACGTTCCCTCTTTCCTCCTTGTCTTCCACTATCATTAAGACCTGGGCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp ACTTCCCCAGGTAAGCCAGGTAAACTAAACCTGAAAGTGGTCAGATTAGGAGAAGTTGCAGTAATTCCTTaGCACTCTTCCGAAAGGCCA +
Preference number: 3 (lower is better)
Translates to: TSPGKPGKLNLKVVRLGEVAVIP*HSSERP
Trigger: TGGCCTTTCGGAAGAGTGCAAAGGAATTACTGCAAC...TTCTCCTAATCTGACCACTTTCAGGTTTAGTTTACCTGGCTTACCTGGGGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp GCACTAACATACCAGCTTAAATGCCCAGAAGAGGAGTGGGTTATTCTTTTCAACATAGGCCAGATTCCATaGGGTTGCACATTGGGAGGA +
Preference number: 3 (lower is better)
Translates to: ALTYQLKCPEEEWVILFNIGQIP*GCTLGG
Trigger: TCCTCCCAATGTGCAACCCAATGGAATCTGGCCTAT...GTTGAAAAGAATAACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGTTAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR TCA 72 bp GCTATCCGAAACCAGCCTTCCTCATTCTTCCATAGGTaGTACTGCAGTGCAAATGCAGTAAAGTCTCTTGGA +
Preference number: 3 (lower is better)
Translates to: AIRNQPSSFFHR*YCSANAVKSLG
Trigger: TCCAAGAGACTTTACTGCATTTGCACTGCAGTATCACCTATGGAAGAATGAGGAAGGCTGGTTTCGGATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374705.5
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000676192.1
ENST00000676371.1
3UTR TCA 72 bp TCTAGCCGGGGATCTTTACTCTCAATCTTTAGGCACTaGAATCCCATATTCTCAGCTATCCGAAACCAGCCT +
Preference number: 3 (lower is better)
Translates to: SSRGSLLSIFRH*NPIFSAIRNQP
Trigger: AGGCTGGTTTCGGATAGCTGAGAATATGGGATTTCAGTGCCTAAAGATTGAGAGTAAAGATCCCCGGCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000676192.1
ENST00000676371.1
3UTR TCA 72 bp CTGGGTGACAAAGTGAGACCCTCATTCTTCCATAGGTaGTACTGCAGTGCAAATGCAGTAAAGTCTCTTGGA +
Preference number: 3 (lower is better)
Translates to: LGDKVRPSFFHR*YCSANAVKSLG
Trigger: TCCAAGAGACTTTACTGCATTTGCACTGCAGTATCACCTATGGAAGAATGAGGGTCTCACTTTGTCACCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602526.1
3UTR CCA 72 bp TTGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATaGACCTTCATGTCTACAAACTCAGTCCAGCACAGT +
Preference number: 3 (lower is better)
Translates to: LASMYSRVSQGT*TFMSTNSVQHS
Trigger: ACTGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000644273.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR CCA 72 bp GAAACAATAAGCTGTCAAATAGGATCTGTGTGCGAGTaGACAAGGACTCAGAGAAAGGACAAGGGCTACAGA +
Preference number: 3 (lower is better)
Translates to: ETISCQIGSVCE*TRTQRKDKGYR
Trigger: TCTGTAGCCCTTGTCCTTTCTCTGAGTCCTTGTCCACTCGCACACAGATCCTATTTGACAGCTTATTGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676310.1
3UTR-3UTR CAA 90 bp ACTTCCCCAGGTAAGCCAGGTAAACTAAACCTGAAAGTGGTCAGATTAGGAGAAAAACCTGTACAGAACTaGAACTCTTCAAAGGGTGGG +
Preference number: 3 (lower is better)
Translates to: TSPGKPGKLNLKVVRLGEKPVQN*NSSKGG
Trigger: CCCACCCTTTGAAGAGTTCAAGTTCTGTACAGGTTT...TTCTCCTAATCTGACCACTTTCAGGTTTAGTTTACCTGGCTTACCTGGGGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp CCACGTCTTTACAGGAATCTTCCAGGTCTTACCATAGTTGGCTTCAATGTATTCTATCCTTCCTTAGCTTaGCCTGGTGAGCTCATCTTC +
Preference number: 3 (lower is better)
Translates to: PRLYRNLPGLTIVGFNVFYPSLA*PGELIF
Trigger: GAAGATGAGCTCACCAGGCAAAGCTAAGGAAGGATA...GAATACATTGAAGCCAACTATGGTAAGACCTGGAAGATTCCTGTAAAGACGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp GATCTAGCCCAGGTCTTAATGATAGTGGAAGACAAGGAGGAAAGAGGGAACGTTGGTCAATTTCAGGTTTaGCAGCTAGGGAATCAAAGA +
Preference number: 3 (lower is better)
Translates to: DLAQVLMIVEDKEERGNVGQFQV*QLGNQR
Trigger: TCTTTGATTCCCTAGCTGCAAAACCTGAAATTGACC...AACGTTCCCTCTTTCCTCCTTGTCTTCCACTATCATTAAGACCTGGGCTAGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp AGCTTGTGGTCTTTTTATGGCAACACATTGCCTTCCCTGAGTGAGATGTTAGAGAGGAAAGAGGGAACGTaGCTGGGATTTTTCTTGAGA +
Preference number: 3 (lower is better)
Translates to: SLWSFYGNTLPSLSEMLERKEGT*LGFFLR
Trigger: TCTCAAGAAAAATCCCAGCAACGTTCCCTCTTTCCT...CTCTAACATCTCACTCAGGGAAGGCAATGTGTTGCCATAAAAAGACCACAAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp CCTCTCATGAAAGACTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATATCTTCAACTTTTTGCTaGCGTACCGTGGAAGTAAAG +
Preference number: 3 (lower is better)
Translates to: PLMKDYQVDRMSGQFADISSTFC*RTVEVK
Trigger: CTTTACTTCCACGGTACGCAAGCAAAAAGTTGAAGA...TATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTCTTTCATGAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374705.5
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
3UTR-3UTR CAA 90 bp GTTGCAGTAATTCCTTTGCACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATGGAACACAGAAAAACTaGCATTGTGAAGTAGAGCCA +
Preference number: 3 (lower is better)
Translates to: VAVIPLHSSERPQLPQCYGTQKN*HCEVEP
Trigger: TGGCTCTACTTCACAATGCAAGTTTTTCTGTGTTCC...ATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTGCAAAGGAATTACTGCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000602526.1
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000676371.1
3UTR-3UTR CAA 90 bp GGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGTGCCAGAGGGGAACACAGAAAAACTaGCATTGTGAAGTAGAGCCA +
Preference number: 3 (lower is better)
Translates to: GTNFLSMCSLSLKWPCQRGTQKN*HCEVEP
Trigger: TGGCTCTACTTCACAATGCAAGTTTTTCTGTGTTCC...CCTCTGGCACGGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000676192.1
ENST00000676371.1
3UTR-3UTR CAA 90 bp AGGAATCTTCCAGGTCTTACCATAGTTGGCTTCAATGTATTCGAGGGTTTCACAGTTGCAGTAATTCCTTaGCACTCTTCCGAAAGGCCA +
Preference number: 3 (lower is better)
Translates to: RNLPGLTIVGFNVFEGFTVAVIP*HSSERP
Trigger: TGGCCTTTCGGAAGAGTGCAAAGGAATTACTGCAAC...TGTGAAACCCTCGAATACATTGAAGCCAACTATGGTAAGACCTGGAAGATTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
3UTR-3UTR CAA 90 bp ATTCAGCTTCCTTTCCATAGTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTAGTTGCAGTAATTCCTTaGCACTCTTCCGAAAGGCCA +
Preference number: 3 (lower is better)
Translates to: IQLPFHSWLQCIRGFHRVVAVIP*HSSERP
Trigger: TGGCCTTTCGGAAGAGTGCAAAGGAATTACTGCAAC...TACCCTGTGAAACCCTCGAATACATTGAAGCCAACTATGGAAAGGAAGCTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642537.1
ENST00000645933.1
3UTR-3UTR CAA 90 bp TCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACAGTGTAAACCACAATGAAGTTGAATaGAGGCAGAACTCATGGTCT +
Preference number: 3 (lower is better)
Translates to: SQGTWTFMSTNSVQHSVNHNEVE*RQNSWS
Trigger: AGACCATGAGTTCTGCCTCAATTCAACTTCATTGTG...GTTTACACTGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642177.1
ENST00000642537.1
ENST00000644273.1
3UTR-3UTR CAA 90 bp TGCACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTGCTGATAATTGTTGGTAACTaGCTACTAATGACTGACCTG +
Preference number: 3 (lower is better)
Translates to: CTLPKGHSFHSVIIKVLLIIVGN*LLMTDL
Trigger: CAGGTCAGTCATTAGTAGCAAGTTACCAACAATTAT...CAGCAGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
3UTR TCA 72 bp TGGGGAGAAATGTGGAGTGTATGCATTTCTAAATACTaGGCACAAGCAAATGGTCCTCATCAAGTAGGGTGG +
Preference number: 3 (lower is better)
Translates to: WGEMWSVCISKY*AQANGPHQVGW
Trigger: CCACCCTACTTGATGAGGACCATTTGCTTGTGCTCAGTATTTAGAAATGCATACACTCCACATTTCTCCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp AGGAATCTTCCAGGTCTTACCATAGTTGGCTTCAATGTATTCGAGGGTTTCACAAAACCTGTACAGAACTaGAACTCTTCAAAGGGTGGG +
Preference number: 3 (lower is better)
Translates to: RNLPGLTIVGFNVFEGFTKPVQN*NSSKGG
Trigger: CCCACCCTTTGAAGAGTTCAAGTTCTGTACAGGTTT...TGTGAAACCCTCGAATACATTGAAGCCAACTATGGTAAGACCTGGAAGATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp TGTAGGGAAGAATATAGAACCTGTGTCAATTGGGCCAAGATGTCTTGGATTTCATATCCTTCCTTAGCTTaGCCTGGTGAGCTCATCTTC +
Preference number: 3 (lower is better)
Translates to: CREEYRTCVNWAKMSWISYPSLA*PGELIF
Trigger: GAAGATGAGCTCACCAGGCAAAGCTAAGGAAGGATA...TGAAATCCAAGACATCTTGGCCCAATTGACACAGGTTCTATATTCTTCCCTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp TCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACAGTGTAAACTCTCACTTGAATGATTaGTCAACAAGTGCCATCAGA +
Preference number: 3 (lower is better)
Translates to: SQGTWTFMSTNSVQHSVNSHLND*STSAIR
Trigger: TCTGATGGCACTTGTTGACAAATCATTCAAGTGAGA...GTTTACACTGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp GTTTTCGCTGCTAGTTGCAGTAATTCCTTTGCACTCTTCCGAAAGGCCACAGCTGTAACATGGTCTCACTaGAATGATTTGTCAACAAGT +
Preference number: 3 (lower is better)
Translates to: VFAASCSNSFALFRKATAVTWSH*NDLSTS
Trigger: ACTTGTTGACAAATCATTCAAGTGAGACCATGTTAC...AGCTGTGGCCTTTCGGAAGAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
3UTR-3UTR CAA 90 bp ATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCTTCTTGAGACTACTATaGTTCTCTGGTGTCAGAGGA +
Preference number: 3 (lower is better)
Translates to: MYSRVSQGTWTFMSTNSVFLRLL*FSGVRG
Trigger: TCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAA...GACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp GGGAGTCCCAATTGGAAATGGGGAGAAATGTGGAGTGTATGCATTTCTAAATACTGGGTGACTACCTGGTaGTCCTGGTTATCAATTAAG +
Preference number: 3 (lower is better)
Translates to: GSPNWKWGEMWSVCISKYWVTTW*SWLSIK
Trigger: CTTAATTGATAACCAGGACAACCAGGTAGTCACCCA...GTATTTAGAAATGCATACACTCCACATTTCTCCCCATTTCCAATTGGGACTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp CCATATTCTCAGCTATCCGAAACCAGCCTTCCTCATTCTTCCATAGGTGATACTGGAACACAGAAAAACTaGCATTGTGAAGTAGAGCCA +
Preference number: 3 (lower is better)
Translates to: PYSQLSETSLPHSSIGDTGTQKN*HCEVEP
Trigger: TGGCTCTACTTCACAATGCAAGTTTTTCTGTGTTCC...AGTATCACCTATGGAAGAATGAGGAAGGCTGGTTTCGGATAGCTGAGAATATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000374705.5
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000676192.1
ENST00000676371.1
3UTR-3UTR CAA 90 bp TCTCATGAAAGACTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGGAACACAGAAAAACTaGCATTGTGAAGTAGAGCCA +
Preference number: 3 (lower is better)
Translates to: SHERLPSGSHEWPVCRYSGTQKN*HCEVEP
Trigger: TGGCTCTACTTCACAATGCAAGTTTTTCTGTGTTCC...ACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTCTTTCATGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000676192.1
ENST00000676371.1
3UTR-3UTR CAA 90 bp GTTGGGTTAGAAGGTGCCAGGGGGTATTCTAGGGTAGAAGTTTTGATAGTACGGATAATTGTTGGTAACTaGCTACTAATGACTGACCTG +
Preference number: 3 (lower is better)
Translates to: VGLEGARGYSRVEVLIVRIIVGN*LLMTDL
Trigger: CAGGTCAGTCATTAGTAGCAAGTTACCAACAATTAT...CCGTACTATCAAAACTTCTACCCTAGAATACCCCCTGGCACCTTCTAACCCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642952.1
3UTR-3UTR CAA 90 bp CCAGTCGACAAATCCAAAACCCTTGCTGATCCCATAAAACCCTATAGATCTGCATCACATGCCAGAAATTaGCTTTTTCTGCTAAGCAGG +
Preference number: 3 (lower is better)
Translates to: PVDKSKTLADPIKPYRSASHARN*LFLLSR
Trigger: CCTGCTTAGCAGAAAAAGCAAATTTCTGGCATGTGA...TGCAGATCTATAGGGTTTTATGGGATCAGCAAGGGTTTTGGATTTGTCGACTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674633.1
3UTR TCA 72 bp CTGGGGAGGGACACAAACTTTACAAACTCTATGATCTaGGGTAGGGTGAATAGTTGTCAAGTCCACCATTTA +
Preference number: 3 (lower is better)
Translates to: LGRDTNFTNSMI*GRVNSCQVHHL
Trigger: TAAATGGTGGACTTGACAACTATTCACCCTACCTCAGATCATAGAGTTTGTAAAGTTTGTGTCCCTCCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR TCA 72 bp TTAAGCATCTCAAGCACTGTTAAAGATACTGTGTTGTaGTGCGAAACAGACATTGGACTAGGAGTCACGGCA +
Preference number: 3 (lower is better)
Translates to: LSISSTVKDTVL*CETDIGLGVTA
Trigger: TGCCGTGACTCCTAGTCCAATGTCTGTTTCGCATCACAACACAGTATCTTTAACAGTGCTTGAGATGCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR TCA 72 bp ACTCTGAGCTTTAGTTTCCTAATGTCTAACTGGAGGTaGGAATACCGAACCCACAGGGATAGTATGAGGATT +
Preference number: 3 (lower is better)
Translates to: TLSFSFLMSNWR*EYRTHRDSMRI
Trigger: AATCCTCATACTATCCCTGTGGGTTCGGTATTCTCACCTCCAGTTAGACATTAGGAAACTAAAGCTCAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675668.1
3UTR GCA 72 bp GGTACTCCCAATTTGTTTAATGTTTTCGCTGCTAGTTaGAGTAATTCCTTTGCACTCTTCCGAAAGGCCACA +
Preference number: 3 (lower is better)
Translates to: GTPNLFNVFAAS*SNSFALFRKAT
Trigger: TGTGGCCTTTCGGAAGAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAACATTAAACAAATTGGGAGTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
3UTR GCA 72 bp TGTTGCATTGTCGATACCATCCTAGACAAGTTCCACTaGTCAGCCAGAATGGTACTCCCAATTTGTTTAATG +
Preference number: 3 (lower is better)
Translates to: CCIVDTILDKFH*SARMVLPICLM
Trigger: CATTAAACAAATTGGGAGTACCATTCTGGCTGAGCAGTGGAACTTGTCTAGGATGGTATCGACAATGCAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
3UTR CCA 72 bp ACGTCTTTACAGGAATCTTCCAGGTCTTACCATAGTTaGCTTCAATGTATTCGAGGGTTTCACAGGGTACAT +
Preference number: 3 (lower is better)
Translates to: TSLQESSRSYHS*LQCIRGFHRVH
Trigger: ATGTACCCTGTGAAACCCTCGAATACATTGAAGCCAACTATGGTAAGACCTGGAAGATTCCTGTAAAGACGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp CAGGTACCAAATCTAGTGAAGTACAGTAAACTGCTTGGGACCAGCAAACTAGGTTTGCTGGGATTTTTCTaGAGAAATTCTCTTGACTGG +
Preference number: 3 (lower is better)
Translates to: QVPNLVKYSKLLGTSKLGLLGFF*RNSLDW
Trigger: CCAGTCAAGAGAATTTCTCAAGAAAAATCCCAGCAA...ACCTAGTTTGCTGGTCCCAAGCAGTTTACTGTACTTCACTAGATTTGGTACCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp AGGCCTGAGGCTAAGAACTGTATACTTCATTTAATCCCCCTAAAAACCCTTAGAAGGAAAGAGGGAACGTaGCTGGGATTTTTCTTGAGA +
Preference number: 3 (lower is better)
Translates to: RPEAKNCILHLIPLKTLRRKEGT*LGFFLR
Trigger: TCTCAAGAAAAATCCCAGCAACGTTCCCTCTTTCCT...TCTAAGGGTTTTTAGGGGGATTAAATGAAGTATACAGTTCTTAGCCTCAGGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp ATTCAGCTTCCTTTCCATAGTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTAGGAACACAGAAAAACTaGCATTGTGAAGTAGAGCCA +
Preference number: 3 (lower is better)
Translates to: IQLPFHSWLQCIRGFHRVGTQKN*HCEVEP
Trigger: TGGCTCTACTTCACAATGCAAGTTTTTCTGTGTTCC...TACCCTGTGAAACCCTCGAATACATTGAAGCCAACTATGGAAAGGAAGCTGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642537.1
ENST00000645933.1
3UTR-3UTR CAA 90 bp CTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTGCTGAAAGAAATAATTGTTGGTAACTaGCTACTAATGACTGACCTG +
Preference number: 3 (lower is better)
Translates to: LPKGHSFHSVIIKVLLKEIIVGN*LLMTDL
Trigger: CAGGTCAGTCATTAGTAGCAAGTTACCAACAATTAT...TTCTTTCAGCAGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
3UTR-3UTR CAA 90 bp GTCAGGGTCAAGCAGAGATTCTATAACTCACCTTCTAAACACATCCTCCAAGTTGAAAGATCACCCCTGTaGCCTTTGGCTGTTAAAATA +
Preference number: 3 (lower is better)
Translates to: VRVKQRFYNSPSKHILQVERSPL*PLAVKI
Trigger: TATTTTAACAGCCAAAGGCAACAGGGGTGATCTTTC...AACTTGGAGGATGTGTTTAGAAGGTGAGTTATAGAATCTCTGCTTGACCCTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674767.1
3UTR-3UTR CAA 90 bp ACATGGTCCATCTTCTATAGTGGCTTTATCCTACTTGGACTGAGAATACACCACGTGGGTCTTGGGCACTaGACAGTTATATACTTCATT +
Preference number: 3 (lower is better)
Translates to: TWSIFYSGFILLGLRIHHVGLGH*TVIYFI
Trigger: AATGAAGTATATAACTGTCAAGTGCCCAAGACCCAC...GTGGTGTATTCTCAGTCCAAGTAGGATAAAGCCACTATAGAAGATGGACCATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
3UTR TCA 72 bp GGTCCATCTTCTATAGTGGCTTTATCCTACTTGGACTaGGAATACACCACCTTTCACAAAGTTAATGGGCTA +
Preference number: 3 (lower is better)
Translates to: GPSSIVALSYLD*EYTTFHKVNGL
Trigger: TAGCCCATTAACTTTGTGAAAGGTGGTGTATTCTCAGTCCAAGTAGGATAAAGCCACTATAGAAGATGGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
3UTR CCA 72 bp GGTCTATGTAGGGAAGAATATAGAACCTGTGTCAATTaGGCCAAGATGTCTTGGATTTCAGACACTCTTAAG +
Preference number: 3 (lower is better)
Translates to: GLCREEYRTCVN*AKMSWISDTLK
Trigger: CTTAAGAGTGTCTGAAATCCAAGACATCTTGGCCCAATTGACACAGGTTCTATATTCTTCCCTACATAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp ACTCCCAATTTGTTTAATGTTTTCGCTGCTAGTTGCAGTAATTCCTTTGCACTCAAACCTGTACAGAACTaGAACTCTTCAAAGGGTGGG +
Preference number: 3 (lower is better)
Translates to: TPNLFNVFAASCSNSFALKPVQN*NSSKGG
Trigger: CCCACCCTTTGAAGAGTTCAAGTTCTGTACAGGTTT...GAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAACATTAAACAAATTGGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
3UTR-3UTR CAA 90 bp CCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGCTCTCAAAGTCTGATCACTaGAATATTAACTCAGACTCC +
Preference number: 3 (lower is better)
Translates to: PFLRLLLFSGVRGKSAKLSKSDH*NINSDS
Trigger: GGAGTCTGAGTTAATATTCAAGTGATCAGACTTTGA...GAGCTTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp GCACTAACATACCAGCTTAAATGCCCAGAAGAGGAGTGGGTTATTCTTTTCAACTCTCACTTGAATGATTaGTCAACAAGTGCCATCAGA +
Preference number: 3 (lower is better)
Translates to: ALTYQLKCPEEEWVILFNSHLND*STSAIR
Trigger: TCTGATGGCACTTGTTGACAAATCATTCAAGTGAGA...GTTGAAAAGAATAACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGTTAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp ATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTCCATTTCTTGAGACTACTATaGTTCTCTGGTGTCAGAGGA +
Preference number: 3 (lower is better)
Translates to: ICFRKSLPAHSLRHSGFHFLRLL*FSGVRG
Trigger: TCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAA...ATGGAAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp CCTGAGGCTAAGAACTGTATACTTCATTTAATCCCCCTAAAAACCCTTAGAAGTCTAACTACCAACAAGTaGTCAACTTCCCCAGGTAAG +
Preference number: 3 (lower is better)
Translates to: PEAKNCILHLIPLKTLRSLTTNK*STSPGK
Trigger: CTTACCTGGGGAAGTTGACAACTTGTTGGTAGTTAG...ACTTCTAAGGGTTTTTAGGGGGATTAAATGAAGTATACAGTTCTTAGCCTCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp TGTCCCACCAAGCAGCTACTCTTAGGGATGCTCAATTTTAGGAACTATGGTTTTCTATCTATGTGCCATTaGAAGTACTGTAGTCGTGTA +
Preference number: 3 (lower is better)
Translates to: CPTKQLLLGMLNFRNYGFLSMCH*KYCSRV
Trigger: TACACGACTACAGTACTTCAAATGGCACATAGATAG...AAAACCATAGTTCCTAAAATTGAGCATCCCTAAGAGTAGCTGCTTGGTGGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp CTGCTGAAAGAATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGGGAACACAGAAAAACTaGCATTGTGAAGTAGAGCCA +
Preference number: 3 (lower is better)
Translates to: LLKECSSFFIPTLNKPRVGTQKN*HCEVEP
Trigger: TGGCTCTACTTCACAATGCAAGTTTTTCTGTGTTCC...CACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTCTTTCAGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000602526.1
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000676371.1
3UTR-3UTR CAA 90 bp CTGGATAACGACCAAACTGTAACTTTCGGAAGGGAACAAATTTCCTGTCAATGTGGAACACAGAAAAACTaGCATTGTGAAGTAGAGCCA +
Preference number: 3 (lower is better)
Translates to: LDNDQTVTFGREQISCQCGTQKN*HCEVEP
Trigger: TGGCTCTACTTCACAATGCAAGTTTTTCTGTGTTCC...ACATTGACAGGAAATTTGTTCCCTTCCGAAAGTTACAGTTTGGTCGTTATCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000676192.1
ENST00000676371.1
3UTR-3UTR CAA 90 bp TCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTTCTACCTTCCCAAATTaGTGTTTGAGCGGAAGTCCT +
Preference number: 3 (lower is better)
Translates to: SNLFSKKSTSPFPQTFRFSTFPN*CLSGSP
Trigger: AGGACTTCCGCTCAAACACAAATTTGGGAAGGTAGA...AAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000642537.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp GGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAAATAATTGTTGGTAACTaGCTACTAATGACTGACCTG +
Preference number: 3 (lower is better)
Translates to: GFNVFEGFTGYMDLHVYKIIVGN*LLMTDL
Trigger: CAGGTCAGTCATTAGTAGCAAGTTACCAACAATTAT...TTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
3UTR-3UTR CAA 90 bp CCTGAGGCTAAGAACTGTATACTTCATTTAATCCCCCTAAAAACCCTTAGAAGTTTCTTGAGACTACTATaGTTCTCTGGTGTCAGAGGA +
Preference number: 3 (lower is better)
Translates to: PEAKNCILHLIPLKTLRSFLRLL*FSGVRG
Trigger: TCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAA...ACTTCTAAGGGTTTTTAGGGGGATTAAATGAAGTATACAGTTCTTAGCCTCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp GTCTCTAACCTGAAAGAATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTGGAACACAGAAAAACTaGCATTGTGAAGTAGAGCCA +
Preference number: 3 (lower is better)
Translates to: VSNLKECSSFFIPTLNKPGTQKN*HCEVEP
Trigger: TGGCTCTACTTCACAATGCAAGTTTTTCTGTGTTCC...AGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTCTTTCAGGTTAGAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675232.1
ENST00000676192.1
3UTR TCA 72 bp ACAGCAGGTAATAATTACTTAGCACCCAGGACCTCCTaGCACACCTCAAAGCTCTTTTTGTGTATTAATTCT +
Preference number: 3 (lower is better)
Translates to: TAGNNYLAPRTS*HTSKLFLCINS
Trigger: AGAATTAATACACAAAAAGAGCTTTGAGGTGTGTCAGGAGGTCCTGGGTGCTAAGTAATTATTACCTGCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675668.1
3UTR CCA 72 bp GAATATAGAACCTGTGTCAATTGGGCCAAGATGTCTTaGATTTCAGACACTCTTAAGACTTTGTACTTCAGG +
Preference number: 3 (lower is better)
Translates to: EYRTCVNWAKMS*ISDTLKTLYFR
Trigger: CCTGAAGTACAAAGTCTTAAGAGTGTCTGAAATCCAAGACATCTTGGCCCAATTGACACAGGTTCTATATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR CCA 72 bp AGTAAACTGCTTGGGACCAGCAAACTAGGTAGCATATaGGATAATATTAGGAGACAACTGCTTAACCAAGAA +
Preference number: 3 (lower is better)
Translates to: SKLLGTSKLGSI*DNIRRQLLNQE
Trigger: TTCTTGGTTAAGCAGTTGTCTCCTAATATTATCCCATATGCTACCTAGTTTGCTGGTCCCAAGCAGTTTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR CCA 72 bp GACAAACCCCAAATGAGGGACACTGCACAAAACATCTaGCTTGTAATCTTCCAAAGTATTAGTCATGAAAGT +
Preference number: 3 (lower is better)
Translates to: DKPQMRDTAQNI*LVIFQSISHES
Trigger: ACTTTCATGACTAATACTTTGGAAGATTACAAGCCAGATGTTTTGTGCAGTGTCCCTCATTTGGGGTTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675232.1
ENST00000676192.1
3UTR-3UTR CAA 90 bp TGTAGGGAAGAATATAGAACCTGTGTCAATTGGGCCAAGATGTCTTGGATTTCATCAAAGTCTGATCACTaGAATATTAACTCAGACTCC +
Preference number: 3 (lower is better)
Translates to: CREEYRTCVNWAKMSWISSKSDH*NINSDS
Trigger: GGAGTCTGAGTTAATATTCAAGTGATCAGACTTTGA...TGAAATCCAAGACATCTTGGCCCAATTGACACAGGTTCTATATTCTTCCCTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp AAAAGAAGTAGGTATTTGTCTCATTCATCTAGGCTTCTCCACTGTAACCTAGCATCTCACTTGAATGATTaGTCAACAAGTGCCATCAGA +
Preference number: 3 (lower is better)
Translates to: KRSRYLSHSSRLLHCNLASHLND*STSAIR
Trigger: TCTGATGGCACTTGTTGACAAATCATTCAAGTGAGA...TGCTAGGTTACAGTGGAGAAGCCTAGATGAATGAGACAAATACCTACTTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp AGGCCTGAGGCTAAGAACTGTATACTTCATTTAATCCCCCTAAAAACCCTTAGAGTAACATGGTCTCACTaGAATGATTTGTCAACAAGT +
Preference number: 3 (lower is better)
Translates to: RPEAKNCILHLIPLKTLRVTWSH*NDLSTS
Trigger: ACTTGTTGACAAATCATTCAAGTGAGACCATGTTAC...TCTAAGGGTTTTTAGGGGGATTAAATGAAGTATACAGTTCTTAGCCTCAGGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp GTTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAATTCAGGTTTCCATTCTaGAGACTACTATTGTTCTCT +
Preference number: 3 (lower is better)
Translates to: VSILETTIVLWCQRKICQFRFPF*RLLLFS
Trigger: AGAGAACAATAGTAGTCTCAAGAATGGAAACCTGAA...TTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp TGTACTTTCTCTGACTGCTCTCTCTATTTACTAAAAGGTTTGGGAATGTTGTCATCTTCAACTTTTTGCTaGCGTACCGTGGAAGTAAAG +
Preference number: 3 (lower is better)
Translates to: CTFSDCSLYLLKGLGMLSSSTFC*RTVEVK
Trigger: CTTTACTTCCACGGTACGCAAGCAAAAAGTTGAAGA...TGACAACATTCCCAAACCTTTTAGTAAATAGAGAGAGCAGTCAGAGAAAGTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674767.1
3UTR-3UTR CAA 90 bp CAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTCACAATGAAGTTGAATaGAGGCAGAACTCATGGTCT +
Preference number: 3 (lower is better)
Translates to: QRFSCCFTNPEWVVVSYFHNEVE*RQNSWS
Trigger: AGACCATGAGTTCTGCCTCAATTCAACTTCATTGTG...AAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642177.1
ENST00000642537.1
3UTR-3UTR CAA 90 bp TACAGTACTGACAGTAGCTACTACTTACACAATACTTACAATGTGCCAGGTACTCCTCTGAAGGTTATTTaGAGGACTAGATGGGTTAAT +
Preference number: 3 (lower is better)
Translates to: YSTDSSYYLHNTYNVPGTPLKVI*RTRWVN
Trigger: ATTAACCCATCTAGTCCTCAAAATAACCTTCAGAGG...AGTACCTGGCACATTGTAAGTATTGTGTAAGTAGTAGCTACTGTCAGTACTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675668.1
3UTR TCA 72 bp TTTTCAACTAGTATATCCTTCCTTAGCTTTGCCTGGTaGGCTCATCTTCCAGTTCAAACATTACTTCACGTT +
Preference number: 3 (lower is better)
Translates to: FSTSISFLSFAW*AHLPVQTLLHV
Trigger: AACGTGAAGTAATGTTTGAACTGGAAGATGAGCTCACCAGGCAAAGCTAAGGAAGGATATACTAGTTGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR TCA 72 bp TTCAAGATCATGTCTAGTAACATGGTCTCACTTGAATaGTTTGTCAACAAGTGCCATCAGAGGTCAGTGAAA +
Preference number: 3 (lower is better)
Translates to: FKIMSSNMVSLE*FVNKCHQRSVK
Trigger: TTTCACTGACCTCTGATGGCACTTGTTGACAAATCATTCAAGTGAGACCATGTTACTAGACATGATCTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR TCA 72 bp GTCTTATCCTATCAAGTTGACACAATGAAGTTGAATTaGGGCAGAACTCATGGTCTATCTTGTAATACAGGC +
Preference number: 3 (lower is better)
Translates to: VLSYQVDTMKLN*GRTHGLSCNTG
Trigger: GCCTGTATTACAAGATAGACCATGAGTTCTGCCTCAATTCAACTTCATTGTGTCAACTTGATAGGATAAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642177.1
ENST00000642537.1
ENST00000644273.1
3UTR CCA 72 bp AAATCATGGCCTCTTTCAAGATCATGTCTAGTAACATaGTCTCACTTGAATGATTTGTCAACAAGTGCCATC +
Preference number: 3 (lower is better)
Translates to: KSWPLSRSCLVT*SHLNDLSTSAI
Trigger: GATGGCACTTGTTGACAAATCATTCAAGTGAGACCATGTTACTAGACATGATCTTGAAAGAGGCCATGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR CCA 72 bp AGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTaGTACTTCTTCTACAAAGTGCATTGGATCCTTTGG +
Preference number: 3 (lower is better)
Translates to: SFFIPTLNKPRV*YFFYKVHWILW
Trigger: CCAAAGGATCCAATGCACTTTGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
3UTR CCA 72 bp TTACACTTGCCACATTTCAAATATTCAGTAGTCATGTaGCTAGTGGCTACAGATACATCATTTGCAGCATCA +
Preference number: 3 (lower is better)
Translates to: LHLPHFKYSVVM*LVATDTSFAAS
Trigger: TGATGCTGCAAATGATGTATCTGTAGCCACTAGCCACATGACTACTGAATATTTGAAATGTGGCAAGTGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674633.1
3UTR CCA 72 bp AGTGTAAACTTCGGAAACAGGTATCTTTCAAACTTCTaGCTTCTACCCATACCAGTTGATTCAAAATGGGAA +
Preference number: 3 (lower is better)
Translates to: SVNFGNRYLSNF*LLPIPVDSKWE
Trigger: TTCCCATTTTGAATCAACTGGTATGGGTAGAAGCCAGAAGTTTGAAAGATACCTGTTTCCGAAGTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp AATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCAAAGTCTGATCACTaGAATATTAACTCAGACTCC +
Preference number: 3 (lower is better)
Translates to: NARASLYLHSINLECGTSSKSDH*NINSDS
Trigger: GGAGTCTGAGTTAATATTCAAGTGATCAGACTTTGA...AGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
3UTR TCA 72 bp GGTAAACTAAACCTGAAAGTGGTCAGATTAGGAGAATaGCTGCTAGAATACTCAAGTGATGAAAGAAAAGTG +
Preference number: 3 (lower is better)
Translates to: GKLNLKVVRLGE*LLEYSSDERKV
Trigger: CACTTTTCTTTCATCACTTGAGTATTCTAGCAGTCATTCTCCTAATCTGACCACTTTCAGGTTTAGTTTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR TCA 72 bp CTTGCTCAAGGTAATATAGCTGGTAAAATAAAGAGCTaGGATTCAACAGCAATCACACTGGCTTCAGAATAT +
Preference number: 3 (lower is better)
Translates to: LAQGNIAGKIKS*DSTAITLASEY
Trigger: ATATTCTGAAGCCAGTGTGATTGCTGTTGAATCTCAGCTCTTTATTTTACCAGCTATATTACCTTGAGCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675668.1
3UTR GCA 72 bp TTTCAATATAAGGTGAAATATGTGAATGTGGTAAGCTaGTCTTCAACTTTTTGCTTGCGTACCGTGGAAGTA +
Preference number: 3 (lower is better)
Translates to: FQYKVKYVNVVS*SSTFCLRTVEV
Trigger: TACTTCCACGGTACGCAAGCAAAAAGTTGAAGAGCAGCTTACCACATTCACATATTTCACCTTATATTGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675232.1
3UTR CCA 72 bp ACCTGGTTTTATGATAGAAGATACCTTTCAAACTTCTaGCTTCTACCCATACCAGTTGATTCAAAATGGGAA +
Preference number: 3 (lower is better)
Translates to: TWFYDRRYLSNF*LLPIPVDSKWE
Trigger: TTCCCATTTTGAATCAACTGGTATGGGTAGAAGCCAGAAGTTTGAAAGGTATCTTCTATCATAAAACCAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
3UTR CCA 72 bp TACACTGTATTAGAGAAACCTCAGATTTGTGGGTCTTaGGCACTTGACAGTTATATACTTCATTTTCGTATC +
Preference number: 3 (lower is better)
Translates to: YTVLEKPQICGS*ALDSYILHFRI
Trigger: GATACGAAAATGAAGTATATAACTGTCAAGTGCCCAAGACCCACAAATCTGAGGTTTCTCTAATACAGTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
3UTR-3UTR CAA 90 bp CAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTTCAAAGTCTGATCACTaGAATATTAACTCAGACTCC +
Preference number: 3 (lower is better)
Translates to: QRFSCCFTNPEWVVVSYFSKSDH*NINSDS
Trigger: GGAGTCTGAGTTAATATTCAAGTGATCAGACTTTGA...AAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp TTAAATGCCCAGAAGAGGAGTGGGTTATTCTTTTCAACTAGTATATCCTTCCTTTCAAAGTCTGATCACTaGAATATTAACTCAGACTCC +
Preference number: 3 (lower is better)
Translates to: LNAQKRSGLFFSTSISFLSKSDH*NINSDS
Trigger: GGAGTCTGAGTTAATATTCAAGTGATCAGACTTTGA...AAGGAAGGATATACTAGTTGAAAAGAATAACCCACTCCTCTTCTGGGCATTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp AGAATGGTACTCCCAATTTGTTTAATGTTTTCGCTGCTAGTTGCAGTAATTCCTAATGGTACTCCCAATTaGTTTAATGTTTTCGCTGCT +
Preference number: 3 (lower is better)
Translates to: RMVLPICLMFSLLVAVIPNGTPN*FNVFAA
Trigger: AGCAGCGAAAACATTAAACAAATTGGGAGTACCATT...AGGAATTACTGCAACTAGCAGCGAAAACATTAAACAAATTGGGAGTACCATTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
3UTR-3UTR CAA 90 bp CCAGAAACCACTCATGTTATTTATGAAAGACCCAATAATTCTGCATTGAGAATGTCAAAGTCTGATCACTaGAATATTAACTCAGACTCC +
Preference number: 3 (lower is better)
Translates to: PETTHVIYERPNNSALRMSKSDH*NINSDS
Trigger: GGAGTCTGAGTTAATATTCAAGTGATCAGACTTTGA...CATTCTCAATGCAGAATTATTGGGTCTTTCATAAATAACATGAGTGGTTTCTGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR-3UTR CAA 90 bp ATTTATCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTCAAAGGTTTTCATGTaGCTTTACAAATCCGGAATG +
Preference number: 3 (lower is better)
Translates to: IYQRFSCCFTNPEWVVVSSKVFM*LYKSGM
Trigger: CATTCCGGATTTGTAAAGCAACATGAAAACCTTTGA...ACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGATAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000457847.1
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR TCA 72 bp AAGACTGAAAAACATCTTGTTGAAAAGAGATTATGCTaGGACCATAATAGCCCATTCATCTGCCTGTGTATT +
Preference number: 3 (lower is better)
Translates to: KTEKHLVEKRLC*DHNSPFICLCI
Trigger: AATACACAGGCAGATGAATGGGCTATTATGGTCTCAGCATAATCTCTTTTCAACAAGATGTTTTTCAGTCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674767.1
3UTR GCA 72 bp TTCCTGCTTACCTATGTAATATCCTGCCTATCTATGTaGCATTTGAAGTACTGTAGTCGTGTAAGAATAAAA +
Preference number: 3 (lower is better)
Translates to: FLLTYVISCLSM*HLKYCSRVRIK
Trigger: TTTTATTCTTACACGACTACAGTACTTCAAATGGCACATAGATAGGCAGGATATTACATAGGTAAGCAGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR GCA 72 bp AAAAGTACACATTTGGTTGTCTCTAACCTGAAAGAATaGTCGAGCTTCTTTATACCTACACTCAATAAACCT +
Preference number: 3 (lower is better)
Translates to: KSTHLVVSNLKE*SSFFIPTLNKP
Trigger: AGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTCTTTCAGGTTAGAGACAACCAAATGTGTACTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR TCA 90 bp CTGTCAAATAGGATCTGTGTGCGAGTGGACAAGGACTCAGAGAAAGGACAAGGGCCAGGGGAGGGGCTCTaGCTGCTGGGTGCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LSNRICVRVDKDSEKGQGPGEGL*LLGAWW
Trigger: CCACCAGGCACCCAGCAGTCAGAGCCCCTCCCCTGG...CCCTTGTCCTTTCTCTGAGTCCTTGTCCACTCGCACACAGATCCTATTTGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR GCA 90 bp AAGTCACTGAGACTTTGGGGTTGTTTGTCACACCGCCACCCACCTTACCCACCTGGGAGGGGCTCTGACTaGTGGGTGCCTGGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: KSLRLWGCLSHRHPPYPPGRGSD*WVPGGR
Trigger: CCTTCCACCAGGCACCCAGCAGTCAGAGCCCCTCCC...AGGTGGGTAAGGTGGGTGGCGGTGTGACAAACAACCCCAAAGTCTCAGTGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR CCA 90 bp GCTACGAAGGCCCACTTGGGCTGTCAGGCCTCAGCTTTAGGTGCCAGTACACTGCTACGAAGGCCCACTTaGGCTGTCAGGCCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: ATKAHLGCQASALGASTLLRRPT*AVRPQL
Trigger: AAGCTGAGGCCTGACAGCCCAAGTGGGCCTTCGTAG...CAGTGTACTGGCACCTAAAGCTGAGGCCTGACAGCCCAAGTGGGCCTTCGTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR TCA 90 bp AAGGACAAGGGCTACAGAGAAAGGAGCCCGATTGTGTTGACATCCTGGGACCAGGGTGGGTGGATCACCTaGGGTCAGGGGCTTGAGACC +
Preference number: 4 (lower is better)
Translates to: KDKGYRERSPIVLTSWDQGGWIT*GQGLET
Trigger: GGTCTCAAGCCCCTGACCTCAGGTGATCCACCCACC...CTGGTCCCAGGATGTCAACACAATCGGGCTCCTTTCTCTGTAGCCCTTGTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR TCA 90 bp TACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTCCCAGCGGTACCTGTCTaGAGGCGCCCACCCATCCCC +
Preference number: 4 (lower is better)
Translates to: YQVDRMSGQFADIVQGDFPAVPV*RRPPIP
Trigger: GGGGATGGGTGGGCGCCTTCAGACAGGTACCGCTGG...GAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS-3UTR TCA 90 bp GCTACGAAGGCCCACTTGGGCTGTCAGGCCTCAGCTTTAGGTGCCAGTACACTGACCAAGTGGATCGCATaGGTGGCCAGTTTGCAGATA +
Preference number: 4 (lower is better)
Translates to: ATKAHLGCQASALGASTLTKWIA*VASLQI
Trigger: TATCTGCAAACTGGCCACTCATGCGATCCACTTGGT...CAGTGTACTGGCACCTAAAGCTGAGGCCTGACAGCCCAAGTGGGCCTTCGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR TCA 90 bp AGGATCTGTGTGCGAGTGGACAAGGACTCAGAGAAAGGACAAGGGCTACAGAGAGACATAGGAGTTGGGTaGGCACTGGAGGAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: RICVRVDKDSEKGQGLQRDIGVG*ALEEGQ
Trigger: CTGGCCCTCCTCCAGTGCTCACCCAACTCCTATGTC...TCTCTGTAGCCCTTGTCCTTTCTCTGAGTCCTTGTCCACTCGCACACAGATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR TCA 90 bp GTTTTCGCTGCTAGTTGCAGTAATTCCTTTGCACTCTTCCGAAAGGCCACAGCTCCCCGGGTACCGACCTaGGCCTCCCGTACCTTACCT +
Preference number: 4 (lower is better)
Translates to: VFAASCSNSFALFRKATAPRVPT*ASRTLP
Trigger: AGGTAAGGTACGGGAGGCTCAGGTCGGTACCCGGGG...AGCTGTGGCCTTTCGGAAGAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS-3UTR CCA 90 bp AGGCCAGATTCCATTGGGTTGCACATTGGGAGGAGAGCGCTTCCAGTCCCACGTGAACTCTTCAAAGGGTaGGGGAGGGTTCCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: RPDSIGLHIGRRALPVPRELFKG*GRVPSK
Trigger: CTTTGAGGGAACCCTCCCCCACCCTTTGAAGAGTTC...ACGTGGGACTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATGGAATCTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GCTCTGACATTTGTGGGGGCCATGATAAGGGTACAAATGGAGACTCCATCCCCGGTGGGACATAGGAGTTaGGTGAGCACTGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: ALTFVGAMIRVQMETPSPVGHRS*VSTGGG
Trigger: CCCTCCTCCAGTGCTCACCCAACTCCTATGTCCCAC...CGGGGATGGAGTCTCCATTTGTACCCTTATCATGGCCCCCACAAATGTCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR CCA 90 bp AAGGACAAGGGCTACAGAGAAAGGAGCCCGATTGTGTTGACATCCTGGGACCAGGGGAGTGGGGTAGGATaGGGAGGTAGGCATGAAGGT +
Preference number: 4 (lower is better)
Translates to: KDKGYRERSPIVLTSWDQGSGVG*GGRHEG
Trigger: ACCTTCATGCCTACCTCCCCATCCTACCCCACTCCC...CTGGTCCCAGGATGTCAACACAATCGGGCTCCTTTCTCTGTAGCCCTTGTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676310.1
3UTR CAA 72 bp TCCCAGCTACTTGGGGGTCTGAGCCAGGAGGATCACTaGAACCTGAGAGATCAAGGCTGCAGTGAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: SQLLGGLSQEDH*NLRDQGCSEPR
Trigger: TCTTGGCTCACTGCAGCCTTGATCTCTCAGGTTCAAGTGATCCTCCTGGCTCAGACCCCCAAGTAGCTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602526.1
CDS-3UTR TCA 90 bp GTGTTCTTTAAGTCTCAAGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGCTCTATCGCCCAGGCTaGAGTGCAATGCCGCGATCT +
Preference number: 4 (lower is better)
Translates to: VFFKSQVAVPEVVATPLMLYRPG*SAMPRS
Trigger: AGATCGCGGCATTGCACTTCAGCCTGGGCGATAGAG...CATGAGAGGAGTGGCAACTACCTCTGGCACGGCCACTTGAGACTTAAAGAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000642952.1
CDS-3UTR TCA 90 bp AGGATCTGTGTGCGAGTGGACAAGGACTCAGAGAAAGGACAAGGGCTACAGAGAGGAGCCCGATTGTGTTaGCATCCTGGGACCAGGGTT +
Preference number: 4 (lower is better)
Translates to: RICVRVDKDSEKGQGLQRGARLC*HPGTRV
Trigger: AACCCTGGTCCCAGGATGTCAACACAATCGGGCTCC...TCTCTGTAGCCCTTGTCCTTTCTCTGAGTCCTTGTCCACTCGCACACAGATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR GCA 90 bp AGAGGAGAGAAGGACAAGTGCTCCCTGCTTAGAGAGGACTGGGTGACTACCTGGGCTCACTGCAGACTCTaGTTCCCGGGTTCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: RGEKDKCSLLREDWVTTWAHCRL*FPGSSD
Trigger: ATCACTTGAACCCGGGAAGCAGAGTCTGCAGTGAGC...CCAGGTAGTCACCCAGTCCTCTCTAAGCAGGGAGCACTTGTCCTTCTCTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR CCA 90 bp AGAGGAGAGAAGGACAAGTGCTCCCTGCTTAGAGAGGACTGGGTGACTACCTGGCATTGGGTTGCACATTaGGAGGAGAGCGCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: RGEKDKCSLLREDWVTTWHWVAH*EESASS
Trigger: ACTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATG...CCAGGTAGTCACCCAGTCCTCTCTAAGCAGGGAGCACTTGTCCTTCTCTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATCGCATGGTAGTCCCAGCTACTTaGGGGTCTGAGCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: VPEVVATPLMKDYQVDRMVVPAT*GSEPGG
Trigger: TCCTCCTGGCTCAGACCCCCAAGTAGCTGGGACTAC...CATGCGATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675443.1
ENST00000675736.1
3UTR CAA 72 bp CTCATCCCACTCAGAAATAGGCCAGATTCCATTGGGTaGCACATTGGGAGGAGAGCGCTTCCAGTCCCACGT +
Preference number: 4 (lower is better)
Translates to: LIPLRNRPDSIG*HIGRRALPVPR
Trigger: ACGTGGGACTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATGGAATCTGGCCTATTTCTGAGTGGGATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATCGGCCTGGGTGACAAAGTaGGACCCTCATTCTTCCATA +
Preference number: 4 (lower is better)
Translates to: GRARGSCHSSHERLPSGSAWVTK*DPHSSI
Trigger: TATGGAAGAATGAGGGTCTCACTTTGTCACCCAGGC...CGATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675443.1
ENST00000675736.1
CDS-3UTR TCA 90 bp ATGGACCTAGGGAATAGCCCTATCCAGGCCCTGGAAAAGGGTTCATGGTCATTTCTGAGGTCAGGGGCTTaGGACCAACCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: MDLGNSPIQALEKGSWSFLRSGA*DQPGQH
Trigger: ATGTTGGCCAGGTTGGTCTCAAGCCCCTGACCTCAG...AAATGACCATGAACCCTTTTCCAGGGCCTGGATAGGGCTATTCCCTAGGTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR TCA 90 bp GCTACGAAGGCCCACTTGGGCTGTCAGGCCTCAGCTTTAGGTGCCAGTACACTGGAAACTGTCCCAGACTaGAGAAGACTAAAGAGACAG +
Preference number: 4 (lower is better)
Translates to: ATKAHLGCQASALGASTLETVPD*RRLKRQ
Trigger: CTGTCTCTTTAGTCTTCTTCAGTCTGGGACAGTTTC...CAGTGTACTGGCACCTAAAGCTGAGGCCTGACAGCCCAAGTGGGCCTTCGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675232.1
ENST00000676192.1
CDS-3UTR GCA 90 bp GCAGGGGGATTTCAGTTCCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTCTGCACGCCACTGTGTaGTATCAAATCCAATTCGGC +
Preference number: 4 (lower is better)
Translates to: AGGFQFQRVSLSRLAGDLLHATV*YQIQFG
Trigger: GCCGAATTGGATTTGATAGCACACAGTGGCGTGCAG...AAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAACTGAAATCCCCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000602661.6
ENST00000675443.1
ENST00000675736.1
CDS-3UTR GCA 90 bp GCAGGGGGATTTCAGTTCCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTCATGAGTGGCCAGTTTaGAGATATAGTGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: AGGFQFQRVSLSRLAGDLHEWPV*RYSAGG
Trigger: TCCCCCTGCACTATATCTGCAAACTGGCCACTCATG...AAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAACTGAAATCCCCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR GCA 90 bp TGCAGGGGGATTTCAGTTCCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTCATGAGTGGCCAGTTTaGAGATATAGTGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: CRGISVPESESIPSSRGSHEWPV*RYSAGG
Trigger: TCCCCCTGCACTATATCTGCAAACTGGCCACTCATG...AGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAACTGAAATCCCCCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR GCA 90 bp GTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATCAGATTCCATTGGGTTaGACATTGGGAGGAGAGCGC +
Preference number: 4 (lower is better)
Translates to: VAVPEVVATPLMKDYQVDQIPLG*TLGGER
Trigger: GCGCTCTCCTCCCAATGTGCAACCCAATGGAATCTG...ATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
CDS-3UTR GCA 90 bp AAAGACTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGCAAGGGGTAGGCAGGTaGCCAGAATGCTGGAGGATG +
Preference number: 4 (lower is better)
Translates to: KDYQVDRMSGQFADIVQGQGVGR*PECWRM
Trigger: CATCCTCCAGCATTCTGGGCACCTGCCTACCCCTTG...CCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS-3UTR CCA 90 bp AAGGACAAGGGCTACAGAGAAAGGAGCCCGATTGTGTTGACATCCTGGGACCAGGCCCTATCCAGGCCCTaGAAAAGGGTTCATGGTCAT +
Preference number: 4 (lower is better)
Translates to: KDKGYRERSPIVLTSWDQALSRP*KRVHGH
Trigger: ATGACCATGAACCCTTTTCCAGGGCCTGGATAGGGC...CTGGTCCCAGGATGTCAACACAATCGGGCTCCTTTCTCTGTAGCCCTTGTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR TCA 90 bp CCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGCTCGCGATGCTCGTGGACTaGCTGAGGAGTACCCAGCCC +
Preference number: 4 (lower is better)
Translates to: PFLRLLLFSGVRGKSAKLAMLVD*LRSTQP
Trigger: GGGCTGGGTACTCCTCAGTCAGTCCACGAGCATCGC...GAGCTTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS-3UTR GCA 90 bp AAGGACAAGGGCTACAGAGAAAGGAGCCCGATTGTGTTGACATCCTGGGACCAGCTGCACGCCACTGTGTaGTATCAAATCCAATTCGGC +
Preference number: 4 (lower is better)
Translates to: KDKGYRERSPIVLTSWDQLHATV*YQIQFG
Trigger: GCCGAATTGGATTTGATAGCACACAGTGGCGTGCAG...CTGGTCCCAGGATGTCAACACAATCGGGCTCCTTTCTCTGTAGCCCTTGTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR GCA 90 bp GTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATCATGAGTGGCCAGTTTaGAGATATAGTGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: VAVPEVVATPLMKDYQVDHEWPV*RYSAGG
Trigger: TCCCCCTGCACTATATCTGCAAACTGGCCACTCATG...ATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR GCA 90 bp GCTCTGACATTTGTGGGGGCCATGATAAGGGTACAAATGGAGACTCCATCCCCGCATGAGTGGCCAGTTTaGAGATATAGTGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: ALTFVGAMIRVQMETPSPHEWPV*RYSAGG
Trigger: TCCCCCTGCACTATATCTGCAAACTGGCCACTCATG...CGGGGATGGAGTCTCCATTTGTACCCTTATCATGGCCCCCACAAATGTCAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR GCA 90 bp GACTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATGGAGAGAAGGACAAGTaGTCCCTGCTTAGAGAGGAC +
Preference number: 4 (lower is better)
Translates to: DYQVDRMSGQFADIVQGDGEKDK*SLLRED
Trigger: GTCCTCTCTAAGCAGGGAGCACTTGTCCTTCTCTCC...ATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR GCA 90 bp AGAAATAGGCCAGATTCCATTGGGTTGCACATTGGGAGGAGAGCGCTTCCAGTCACAGGTGTGAGCCACTaGACCCAAAAGAAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: RNRPDSIGLHIGRRALPVTGVSH*TQKKQG
Trigger: TCCCTGCTTCTTTTGGGTGCAGTGGCTCACACCTGT...GACTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATGGAATCTGGCCTATTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675695.1
CDS-3UTR GCA 90 bp CTGAGACTTTGGGGTTGTTTGTCACACCGCCACCCACCTTACCCACCTCCAAAAATGGGTCTTCTCCCATaGCAGTCTCCCAATGTAGAG +
Preference number: 4 (lower is better)
Translates to: LRLWGCLSHRHPPYPPPKMGLLP*QSPNVE
Trigger: CTCTACATTGGGAGACTGGCATGGGAGAAGACCCAT...TTTTGGAGGTGGGTAAGGTGGGTGGCGGTGTGACAAACAACCCCAAAGTCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR GCA 90 bp ATGAAAGACTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGCAGGTGCCCAGAATaGTGGAGGATGCCCGGTAAG +
Preference number: 4 (lower is better)
Translates to: MKDYQVDRMSGQFADIVQGRCPE*WRMPGK
Trigger: CTTACCGGGCATCCTCCAGCATTCTGGGCACCTGCC...CTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTCTTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS-3UTR CCA 90 bp AGGCCAGATTCCATTGGGTTGCACATTGGGAGGAGAGCGCTTCCAGTCCCACGTAGTGGATCGCATGAGTaGCCAGTTTGCAGATATAGT +
Preference number: 4 (lower is better)
Translates to: RPDSIGLHIGRRALPVPRSGSHE*PVCRYS
Trigger: ACTATATCTGCAAACTGGCCACTCATGCGATCCACT...ACGTGGGACTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATGGAATCTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATCGCATGAGTGGCCATTGGGTTGCACATTaGGAGGAGAGCGCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: EVVATPLMKDYQVDRMSGHWVAH*EESASS
Trigger: ACTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATG...GCCACTCATGCGATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
CDS-3UTR CCA 90 bp GGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTCAGTTCCAGCTGCTTAGAGAGGACTaGGTGACTACCTGGTTGTCC +
Preference number: 4 (lower is better)
Translates to: GSHEWPVCRYSAGGFQFQLLRED*VTTWLS
Trigger: GGACAACCAGGTAGTCACCCAGTCCTCTCTAAGCAG...CTGGAACTGAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR TCA 90 bp ATTCCATTGGGTTGCACATTGGGAGGAGAGCGCTTCCAGTCCCACGTCTTTACAACCAAGTGGATCGCATaGGTGGCCAGTTTGCAGATA +
Preference number: 4 (lower is better)
Translates to: IPLGCTLGGERFQSHVFTTKWIA*VASLQI
Trigger: TATCTGCAAACTGGCCACTCATGCGATCCACTTGGT...TGTAAAGACGTGGGACTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp AAGTCACTGAGACTTTGGGGTTGTTTGTCACACCGCCACCCACCTTACCCACCTTTGCCACTCCTCTCATaGAAGACTACCAAGTGGATC +
Preference number: 4 (lower is better)
Translates to: KSLRLWGCLSHRHPPYPPLPLLS*KTTKWI
Trigger: GATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAA...AGGTGGGTAAGGTGGGTGGCGGTGTGACAAACAACCCCAAAGTCTCAGTGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR TCA 90 bp CAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTCAGTAGATCAAGGCTGCAGTaGGCCAAGATTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: QVDRMSGQFADIVQGDFSRSRLQ*AKIVPL
Trigger: CAGTGGCACAATCTTGGCTCACTGCAGCCTTGATCT...ACTGAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675443.1
ENST00000675736.1
CDS-3UTR TCA 90 bp AAGGACAAGGGCTACAGAGAAAGGAGCCCGATTGTGTTGACATCCTGGGACCAGGGGTTCATGGTCATTTaGACAGAAATTCAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: KDKGYRERSPIVLTSWDQGFMVI*TEIQGS
Trigger: GGACCCCTGAATTTCTGTTCAAATGACCATGAACCC...CTGGTCCCAGGATGTCAACACAATCGGGCTCCTTTCTCTGTAGCCCTTGTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR GCA 90 bp GACTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATCATGAGTGGCCAGTTTaGAGATATAGTGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: DYQVDRMSGQFADIVQGDHEWPV*RYSAGG
Trigger: TCCCCCTGCACTATATCTGCAAACTGGCCACTCATG...ATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR GCA 90 bp CTAGGCTGTGGAGGGCTCTGGATTCCAGTCGACAAATCCAAAACCCTTGCTGATCATGAGTGGCCAGTTTaGAGATATAGTGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: LGCGGLWIPVDKSKTLADHEWPV*RYSAGG
Trigger: TCCCCCTGCACTATATCTGCAAACTGGCCACTCATG...ATCAGCAAGGGTTTTGGATTTGTCGACTGGAATCCAGAGCCCTCCACAGCCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR GCA 90 bp GAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATCGCATGAGTGGCCGTGCCAGAGGTAGTTaGCACTCCTCTCATGAAAGA +
Preference number: 4 (lower is better)
Translates to: EVVATPLMKDYQVDRMSGRARGS*HSSHER
Trigger: TCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACG...GCCACTCATGCGATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR GCA 90 bp GGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTCAGTTCCAGCGTGCCAGAGGTAGTTaGCACTCCTCTCATGAAAGA +
Preference number: 4 (lower is better)
Translates to: GSHEWPVCRYSAGGFQFQRARGS*HSSHER
Trigger: TCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACG...CTGGAACTGAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR GCA 90 bp GTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATCGCATGCGTGCCAGAGGTAGTTaGCACTCCTCTCATGAAAGA +
Preference number: 4 (lower is better)
Translates to: VPEVVATPLMKDYQVDRMRARGS*HSSHER
Trigger: TCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACG...CATGCGATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR GCA 90 bp AAGTCACTGAGACTTTGGGGTTGTTTGTCACACCGCCACCCACCTTACCCACCTCTAGACAAGTTCCACTaGTCAGCCAGAATGGTACTC +
Preference number: 4 (lower is better)
Translates to: KSLRLWGCLSHRHPPYPPLDKFH*SARMVL
Trigger: GAGTACCATTCTGGCTGAGCAGTGGAACTTGTCTAG...AGGTGGGTAAGGTGGGTGGCGGTGTGACAAACAACCCCAAAGTCTCAGTGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR GCA 90 bp TGCACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTGCTGACAGGTGTGAGCCACTaGACCCAAAAGAAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: CTLPKGHSFHSVIIKVLLTGVSH*TQKKQG
Trigger: TCCCTGCTTCTTTTGGGTGCAGTGGCTCACACCTGT...CAGCAGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000642952.1
CDS-3UTR GCA 90 bp AAGTCACTGAGACTTTGGGGTTGTTTGTCACACCGCCACCCACCTTACCCACCTCAAATAGGATCTGTGTaGGAGTGGACAAGGACTCAG +
Preference number: 4 (lower is better)
Translates to: KSLRLWGCLSHRHPPYPPQIGSV*EWTRTQ
Trigger: CTGAGTCCTTGTCCACTCGCACACAGATCCTATTTG...AGGTGGGTAAGGTGGGTGGCGGTGTGACAAACAACCCCAAAGTCTCAGTGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR GCA 90 bp CCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGCTCCAGAATGCTGGAGGATaGCCGGTAAGGGCACCCGAG +
Preference number: 4 (lower is better)
Translates to: PFLRLLLFSGVRGKSAKLQNAGG*PVRAPE
Trigger: CTCGGGTGCCCTTACCGGGCATCCTCCAGCATTCTG...GAGCTTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS-3UTR CCA 90 bp GCAGGGGGATTTCAGTTCCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTGTGCATTGGATCCTTTaGAATGAGAACTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: AGGFQFQRVSLSRLAGDLVHWIL*NENFQS
Trigger: GGACTGGAAGTTCTCATTCCAAAGGATCCAATGCAC...AAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAACTGAAATCCCCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CCA 90 bp GCCTGGCCTTCAGATTCTAGAGAAGGCTTTTGTTTCCCCAAGTTAGGGTGGAACCTGCTTAGAGAGGACTaGGTGACTACCTGGTTGTCC +
Preference number: 4 (lower is better)
Translates to: AWPSDSREGFCFPKLGWNLLRED*VTTWLS
Trigger: GGACAACCAGGTAGTCACCCAGTCCTCTCTAAGCAG...GTTCCACCCTAACTTGGGGAAACAAAAGCCTTCTCTAGAATCTGAAGGCCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp AGGAATTATAATACAAGTGCAAGGGTGGAGGAGAGGGCAGCCCAGACAAATACACTGCTGGGTGCCTGGTaGAAGGGTGGTAAAGACTGG +
Preference number: 4 (lower is better)
Translates to: RNYNTSARVEERAAQTNTLLGAW*KGGKDW
Trigger: CCAGTCTTTACCACCCTTCCACCAGGCACCCAGCAG...TGTATTTGTCTGGGCTGCCCTCTCCTCCACCCTTGCACTTGTATTATAATTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR CCA 90 bp GTCCTGAATGCGAGAGAGTGTGAAATTAGAGTTAGGGACAGAAAGGTAGAAGATAGGGGCTCTGACTGCTaGGTGCCTGGTGGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: VLNARECEIRVRDRKVEDRGSDC*VPGGRV
Trigger: CACCCTTCCACCAGGCACCCAGCAGTCAGAGCCCCT...ATCTTCTACCTTTCTGTCCCTAACTCTAATTTCACACTCTCTCGCATTCAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR CCA 90 bp GCAGGGGGATTTCAGTTCCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTATGGCCCAACAGAGATaGTTTCCAATCGTTCAAACC +
Preference number: 4 (lower is better)
Translates to: AGGFQFQRVSLSRLAGDLMAQQR*FPIVQT
Trigger: GGTTTGAACGATTGGAAACCATCTCTGTTGGGCCAT...AAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAACTGAAATCCCCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675736.1
3UTR CAA 72 bp GCCCTATCCAGGCCCTGGAAAAGGGTTCATGGTCATTaGAACAGAAATTCAGGGGTCCCAGGTTCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: ALSRPWKRVHGH*NRNSGVPGSQN
Trigger: ATTCTGGGAACCTGGGACCCCTGAATTTCTGTTCAAATGACCATGAACCCTTTTCCAGGGCCTGGATAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR TCA 90 bp GCAGGGGGATTTCAGTTCCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTGCTTCCTTTGGATTTTaGCAAACCAGCTCCATTCTT +
Preference number: 4 (lower is better)
Translates to: AGGFQFQRVSLSRLAGDLASFGF*QTSSIL
Trigger: AAGAATGGAGCTGGTTTGTCAAAATCCAAAGGAAGC...AAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAACTGAAATCCCCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR TCA 90 bp CGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACAACCAAGTGGATCGCATaGGTGGCCAGTTTGCAGATA +
Preference number: 4 (lower is better)
Translates to: RGFHRVHGPSCLQTQSSTTKWIA*VASLQI
Trigger: TATCTGCAAACTGGCCACTCATGCGATCCACTTGGT...TGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp TGCACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTGCTGACCAAGTGGATCGCATaGGTGGCCAGTTTGCAGATA +
Preference number: 4 (lower is better)
Translates to: CTLPKGHSFHSVIIKVLLTKWIA*VASLQI
Trigger: TATCTGCAAACTGGCCACTCATGCGATCCACTTGGT...CAGCAGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR TCA 90 bp TCAGTTCCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCACCAAGTGGATCGCATaGGTGGCCAGTTTGCAGATA +
Preference number: 4 (lower is better)
Translates to: SVPESESIPSSRGSLLSITKWIA*VASLQI
Trigger: TATCTGCAAACTGGCCACTCATGCGATCCACTTGGT...GATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR TCA 90 bp GGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATCGTTGGATCCTTTGGAATaGGAACTTCCAGTCCATCAA +
Preference number: 4 (lower is better)
Translates to: GRARGSCHSSHERLPSGSLDPLE*ELPVHQ
Trigger: TTGATGGACTGGAAGTTCTCATTCCAAAGGATCCAA...CGATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR TCA 90 bp AAGGACAAGGGCTACAGAGAAAGGAGCCCGATTGTGTTGACATCCTGGGACCAGTCATCAAGGTACTGCTaGAAGAATGCTCGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: KDKGYRERSPIVLTSWDQSSRYC*KNARAS
Trigger: AGAAGCTCGAGCATTCTTTCAGCAGTACCTTGATGA...CTGGTCCCAGGATGTCAACACAATCGGGCTCCTTTCTCTGTAGCCCTTGTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR TCA 90 bp CGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTCAGTTCCAGAGAGTCCCAAATTTGTGTTTaGGCGGAAGTCCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: RMSGQFADIVQGDFSSRESQICV*AEVLHP
Trigger: AGGATGCAGGACTTCCGCTCAAACACAAATTTGGGA...CTCTCTGGAACTGAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR TCA 90 bp GTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATCGCATGCTTAGCTTTGCCTGGTaGGCTCATCTTCCAGTTCAA +
Preference number: 4 (lower is better)
Translates to: VPEVVATPLMKDYQVDRMLSFAW*AHLPVQ
Trigger: TTGAACTGGAAGATGAGCTCACCAGGCAAAGCTAAG...CATGCGATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
CDS-3UTR TCA 90 bp AGAGGAGAGAAGGACAAGTGCTCCCTGCTTAGAGAGGACTGGGTGACTACCTGGGATCCAATGAGGTACTaGAGATGGATATACCTAACC +
Preference number: 4 (lower is better)
Translates to: RGEKDKCSLLREDWVTTWDPMRY*RWIYLT
Trigger: GGTTAGGTATATCCATCTTCAGTACCTCATTGGATC...CCAGGTAGTCACCCAGTCCTCTCTAAGCAGGGAGCACTTGTCCTTCTCTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTAGGCACTGAATTAGAGAGGACTGGGTaGCTACCTGGTTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: VSLSRLAGDLYSQSLGTELERTG*LPGCPG
Trigger: ACCAGGACAACCAGGTAGTCACCCAGTCCTCTCTAA...TTCAGTGCCTAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR TCA 90 bp TTTGCACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTGCTTAGAGAGGACTGGGTaGCTACCTGGTTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: FALFRKATASTVLSSRYCLERTG*LPGCPG
Trigger: ACCAGGACAACCAGGTAGTCACCCAGTCCTCTCTAA...GCAGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATGGTGAGATTTTAGACTaGAGTGTGGAAGCTCATTCC +
Preference number: 4 (lower is better)
Translates to: VAVPEVVATPLMKDYQVDGEILD*SVEAHS
Trigger: GGAATGAGCTTCCACACTTCAGTCTAAAATCTCACC...ATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR TCA 90 bp ATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCTCTATCGCCCAGGCTaGAGTGCAATGCCGCGATCT +
Preference number: 4 (lower is better)
Translates to: MYSRVSQGTWTFMSTNSVLYRPG*SAMPRS
Trigger: AGATCGCGGCATTGCACTTCAGCCTGGGCGATAGAG...GACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000642952.1
ENST00000644273.1
ENST00000675695.1
CDS-3UTR TCA 90 bp AGGCCTGAGGCTAAGAACTGTATACTTCATTTAATCCCCCTAAAAACCCTTAGATGCTCGTGGACTGACTaGGGAGTACCCAGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: RPEAKNCILHLIPLKTLRCSWTD*GVPSPE
Trigger: CTCCGGGCTGGGTACTCCTCAGTCAGTCCACGAGCA...TCTAAGGGTTTTTAGGGGGATTAAATGAAGTATACAGTTCTTAGCCTCAGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS-3UTR TCA 90 bp TGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAGTAATCTCAGCACTTTaGGAGGCCAACGCGGGCGGA +
Preference number: 4 (lower is better)
Translates to: WLQCIRGFHRVHGPSCLQVISAL*EANAGG
Trigger: TCCGCCCGCGTTGGCCTCTCAAAGTGCTGAGATTAC...TTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS-3UTR GCA 90 bp CGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACACTGCACGCCACTGTGTaGTATCAAATCCAATTCGGC +
Preference number: 4 (lower is better)
Translates to: RGFHRVHGPSCLQTQSSTLHATV*YQIQFG
Trigger: GCCGAATTGGATTTGATAGCACACAGTGGCGTGCAG...TGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602661.6
ENST00000642177.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TTTAAGTCTCAAGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACCATGAGTGGCCAGTTTaGAGATATAGTGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: FKSQVAVPEVVATPLMKDHEWPV*RYSAGG
Trigger: TCCCCCTGCACTATATCTGCAAACTGGCCACTCATG...GTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCCACTTGAGACTTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR GCA 90 bp TACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTCCATGAGTGGCCAGTTTaGAGATATAGTGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: YQVDRMSGQFADIVQGDFHEWPV*RYSAGG
Trigger: TCCCCCTGCACTATATCTGCAAACTGGCCACTCATG...GAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR GCA 90 bp ATGGACCTAGGGAATAGCCCTATCCAGGCCCTGGAAAAGGGTTCATGGTCATTTCGTGCCAGAGGTAGTTaGCACTCCTCTCATGAAAGA +
Preference number: 4 (lower is better)
Translates to: MDLGNSPIQALEKGSWSFRARGS*HSSHER
Trigger: TCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACG...AAATGACCATGAACCCTTTTCCAGGGCCTGGATAGGGCTATTCCCTAGGTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR GCA 90 bp ATTCCATTGGGTTGCACATTGGGAGGAGAGCGCTTCCAGTCCCACGTCTTTACACTAGACAAGTTCCACTaGTCAGCCAGAATGGTACTC +
Preference number: 4 (lower is better)
Translates to: IPLGCTLGGERFQSHVFTLDKFH*SARMVL
Trigger: GAGTACCATTCTGGCTGAGCAGTGGAACTTGTCTAG...TGTAAAGACGTGGGACTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675736.1
CDS-3UTR GCA 90 bp GTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATCGCATGCTGTTTTGGCCTGAGTaGCTCCATTCCACATGTGAT +
Preference number: 4 (lower is better)
Translates to: VPEVVATPLMKDYQVDRMLFWPE*LHSTCD
Trigger: ATCACATGTGGAATGGAGGCACTCAGGCCAAAACAG...CATGCGATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR GCA 90 bp GTGTTCTTTAAGTCTCAAGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGCTGTTTTGGCCTGAGTaGCTCCATTCCACATGTGAT +
Preference number: 4 (lower is better)
Translates to: VFFKSQVAVPEVVATPLMLFWPE*LHSTCD
Trigger: ATCACATGTGGAATGGAGGCACTCAGGCCAAAACAG...CATGAGAGGAGTGGCAACTACCTCTGGCACGGCCACTTGAGACTTAAAGAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR GCA 90 bp GTTGGGTTAGAAGGTGCCAGGGGGTATTCTAGGGTAGAAGTTTTGATAGTACGGACAGGTGTGAGCCACTaGACCCAAAAGAAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: VGLEGARGYSRVEVLIVRTGVSH*TQKKQG
Trigger: TCCCTGCTTCTTTTGGGTGCAGTGGCTCACACCTGT...CCGTACTATCAAAACTTCTACCCTAGAATACCCCCTGGCACCTTCTAACCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000642952.1
ENST00000644273.1
ENST00000675695.1
CDS-3UTR GCA 90 bp GGAGACATTCATGGGTGCCTAACTACCAACAAGTTGTCAACTTCCCCAGGTAAGGCTCACTGCAGACTCTaGTTCCCGGGTTCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: GDIHGCLTTNKLSTSPGKAHCRL*FPGSSD
Trigger: ATCACTTGAACCCGGGAAGCAGAGTCTGCAGTGAGC...CTTACCTGGGGAAGTTGACAACTTGTTGGTAGTTAGGCACCCATGAATGTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR GCA 90 bp GGCCCACTTGGGCTGTCAGGCCTCAGCTTTAGGTGCCAGTACACTGTATTAGAGATTCATGAGGCTGGCTaGATAAATTTCACAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GPLGLSGLSFRCQYTVLEIHEAG*INFTAP
Trigger: TGGAGCTGTGAAATTTATGCAGCCAGCCTCATGAAT...CTCTAATACAGTGTACTGGCACCTAAAGCTGAGGCCTGACAGCCCAAGTGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CCA 90 bp GGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATCGAGGTCTTACCATAGTTaGCTTCAATGTATTCGAGGG +
Preference number: 4 (lower is better)
Translates to: GRARGSCHSSHERLPSGSRSYHS*LQCIRG
Trigger: CCCTCGAATACATTGAAGCCAACTATGGTAAGACCT...CGATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
CDS-3UTR CCA 90 bp GTTGGGTTAGAAGGTGCCAGGGGGTATTCTAGGGTAGAAGTTTTGATAGTACGGCATTGGGTTGCACATTaGGAGGAGAGCGCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: VGLEGARGYSRVEVLIVRHWVAH*EESASS
Trigger: ACTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATG...CCGTACTATCAAAACTTCTACCCTAGAATACCCCCTGGCACCTTCTAACCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000675695.1
CDS-3UTR CCA 90 bp GGAGACATTCATGGGTGCCTAACTACCAACAAGTTGTCAACTTCCCCAGGTAAGGAACTCTTCAAAGGGTaGGGGAGGGTTCCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: GDIHGCLTTNKLSTSPGKELFKG*GRVPSK
Trigger: CTTTGAGGGAACCCTCCCCCACCCTTTGAAGAGTTC...CTTACCTGGGGAAGTTGACAACTTGTTGGTAGTTAGGCACCCATGAATGTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp AATTCCTTTGCACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGAGCCTCCTGTGTAGCTaGGACTATAGGCGTGCACCA +
Preference number: 4 (lower is better)
Translates to: NSFALFRKATASTVLSSRSLLCS*DYRRAP
Trigger: TGGTGCACGCCTATAGTCCCAGCTACACAGGAGGCT...CCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTGCAAAGGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000642952.1
CDS-3UTR CCA 90 bp CCTGCTGATTCTTGCCATAGTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTAAGCCTCCTGTGTAGCTaGGACTATAGGCGTGCACCA +
Preference number: 4 (lower is better)
Translates to: PADSCHSWLQCIRGFHRVSLLCS*DYRRAP
Trigger: TGGTGCACGCCTATAGTCCCAGCTACACAGGAGGCT...TACCCTGTGAAACCCTCGAATACATTGAAGCCAACTATGGCAAGAATCAGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642952.1
ENST00000644273.1
CDS-3UTR CCA 90 bp GTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAGCCTCCTGTGTAGCTaGGACTATAGGCGTGCACCA +
Preference number: 4 (lower is better)
Translates to: VGFNVFEGFTGYMDLHVYSLLCS*DYRRAP
Trigger: TGGTGCACGCCTATAGTCCCAGCTACACAGGAGGCT...GTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000642952.1
ENST00000644273.1
ENST00000675695.1
CDS-3UTR CCA 90 bp CGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGTGCCGGAAACAGGTATCTTaGCCTCCCGAAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: RKGTNFLSMCSLSLKWPCRKQVS*PPEVLG
Trigger: TCCCAGCACTTCGGGAGGCCAAGATACCTGTTTCCG...GCACGGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCCCTTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642952.1
ENST00000645933.1
CDS-3UTR CCA 90 bp GGCCCACTTGGGCTGTCAGGCCTCAGCTTTAGGTGCCAGTACACTGTATTAGAGTGGCTTTATCCTACTTaGACTGAGAATACACCACCT +
Preference number: 4 (lower is better)
Translates to: GPLGLSGLSFRCQYTVLEWLYPT*TENTPP
Trigger: AGGTGGTGTATTCTCAGTCCAAGTAGGATAAAGCCA...CTCTAATACAGTGTACTGGCACCTAAAGCTGAGGCCTGACAGCCCAAGTGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CCA 90 bp GAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATCGCATGAGTGGCTGGACACAGCTTTCTTaGCAGGGAACCCCAGAAAAT +
Preference number: 4 (lower is better)
Translates to: EVVATPLMKDYQVDRMSGWTQLS*QGTPEN
Trigger: ATTTTCTGGGGTTCCCTGCCAAGAAAGCTGTGTCCA...GCCACTCATGCGATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CCA 90 bp GGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTCAGTTCCAGTTTTCGTATCCCTCGTaGACACAGCTTTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: GSHEWPVCRYSAGGFQFQFSYPS*TQLSWQ
Trigger: CTGCCAAGAAAGCTGTGTCCACGAGGGATACGAAAA...CTGGAACTGAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR TCA 90 bp GTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATTCATTCTTCCATAGGTaGTACTGCAGTGCAAATGCA +
Preference number: 4 (lower is better)
Translates to: VAVPEVVATPLMKDYQVDSFFHR*YCSANA
Trigger: TGCATTTGCACTGCAGTATCACCTATGGAAGAATGA...ATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR TCA 90 bp GGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACAGTGTACCAAGTGGATCGCATaGGTGGCCAGTTTGCAGATA +
Preference number: 4 (lower is better)
Translates to: GFTGYMDLHVYKLSPAQCTKWIA*VASLQI
Trigger: TATCTGCAAACTGGCCACTCATGCGATCCACTTGGT...ACACTGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp AAGGACAAGGGCTACAGAGAAAGGAGCCCGATTGTGTTGACATCCTGGGACCAGTTGGATCCTTTGGAATaGGAACTTCCAGTCCATCAA +
Preference number: 4 (lower is better)
Translates to: KDKGYRERSPIVLTSWDQLDPLE*ELPVHQ
Trigger: TTGATGGACTGGAAGTTCTCATTCCAAAGGATCCAA...CTGGTCCCAGGATGTCAACACAATCGGGCTCCTTTCTCTGTAGCCCTTGTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR TCA 90 bp AGAAATAGGCCAGATTCCATTGGGTTGCACATTGGGAGGAGAGCGCTTCCAGTCTCATCAAGGTACTGCTaGAAGAATGCTCGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: RNRPDSIGLHIGRRALPVSSRYC*KNARAS
Trigger: AGAAGCTCGAGCATTCTTTCAGCAGTACCTTGATGA...GACTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATGGAATCTGGCCTATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GGCATATGGCTGGGGGAATCTTCCAAAGAAACTACTCTACTCAGCCATCTCCTGTCCCAAATTTGTGTTTaGGCGGAAGTCCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: GIWLGESSKETTLLSHLLSQICV*AEVLHP
Trigger: AGGATGCAGGACTTCCGCTCAAACACAAATTTGGGA...CAGGAGATGGCTGAGTAGAGTAGTTTCTTTGGAAGATTCCCCCAGCCATATGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR TCA 90 bp AGGCCAGATTCCATTGGGTTGCACATTGGGAGGAGAGCGCTTCCAGTCCCACGTATTGTATGTGGCACATaGAAATTCCTCAGTACTAAG +
Preference number: 4 (lower is better)
Translates to: RPDSIGLHIGRRALPVPRIVCGT*KFLSTK
Trigger: CTTAGTACTGAGGAATTTTCATGTGCCACATACAAT...ACGTGGGACTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATGGAATCTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CCTTTGCACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTAAACAGCATCCTAGCTaGCTCAGACATCTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: PLHSSERPQLPQCYHQGTKQHPS*LRHLEG
Trigger: CCCCTCAAGATGTCTGAGTCAGCTAGGATGCTGTTT...AGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTGCAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACAGTGTATTAGGGTGGAACCCATaGGCTGAAGCCTGTGAAACC +
Preference number: 4 (lower is better)
Translates to: VSQGTWTFMSTNSVQHSVLGWNP*AEACET
Trigger: GGTTTCACAGGCTTCAGCTCATGGGTTCCACCCTAA...TACACTGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CTAAGCGGCAGAAACACCCTGAGACTTAGCCTCAATGAAGCACTGGATGCCTTCGGTGAGATTTTAGACTaGAGTGTGGAAGCTCATTCC +
Preference number: 4 (lower is better)
Translates to: LSGRNTLRLSLNEALDAFGEILD*SVEAHS
Trigger: GGAATGAGCTTCCACACTTCAGTCTAAAATCTCACC...GAAGGCATCCAGTGCTTCATTGAGGCTAAGTCTCAGGGTGTTTCTGCCGCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CCTCTCATGAAAGACTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAAGATCAAGGCTGCAGTaGGCCAAGATTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: PLMKDYQVDRMSGQFADIRSRLQ*AKIVPL
Trigger: CAGTGGCACAATCTTGGCTCACTGCAGCCTTGATCT...TATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTCTTTCATGAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675443.1
ENST00000675736.1
CDS-3UTR TCA 90 bp TTCCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTAAGATCAAGGCTGCAGTaGGCCAAGATTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: FQRVSLSRLAGDLYSQSLRSRLQ*AKIVPL
Trigger: CAGTGGCACAATCTTGGCTCACTGCAGCCTTGATCT...TAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675443.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GGCATATGGCTGGGGGAATCTTCCAAAGAAACTACTCTACTCAGCCATCTCCTGATCATCAACTTGGACTaGCAAACCCAGGGACACTTC +
Preference number: 4 (lower is better)
Translates to: GIWLGESSKETTLLSHLLIINLD*QTQGHF
Trigger: GAAGTGTCCCTGGGTTTGTCAGTCCAAGTTGATGAT...CAGGAGATGGCTGAGTAGAGTAGTTTCTTTGGAAGATTCCCCCAGCCATATGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR GCA 90 bp GGCCCACTTGGGCTGTCAGGCCTCAGCTTTAGGTGCCAGTACACTGTATTAGAGATACTGCAGTGCAAATaGAGTAAAGTCTCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: GPLGLSGLSFRCQYTVLEILQCK*SKVSWN
Trigger: GTTCCAAGAGACTTTACTGCATTTGCACTGCAGTAT...CTCTAATACAGTGTACTGGCACCTAAAGCTGAGGCCTGACAGCCCAAGTGGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR GCA 90 bp GCAGGGGGATTTCAGTTCCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTATACTGCAGTGCAAATaGAGTAAAGTCTCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: AGGFQFQRVSLSRLAGDLILQCK*SKVSWN
Trigger: GTTCCAAGAGACTTTACTGCATTTGCACTGCAGTAT...AAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAACTGAAATCCCCCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR GCA 90 bp AGAGCGCTTCCAGTCCCACGTCTTTACAGGAATCTTCCAGGTCTTACCATAGTTCATGAGTGGCCAGTTTaGAGATATAGTGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: RALPVPRLYRNLPGLTIVHEWPV*RYSAGG
Trigger: TCCCCCTGCACTATATCTGCAAACTGGCCACTCATG...AACTATGGTAAGACCTGGAAGATTCCTGTAAAGACGTGGGACTGGAAGCGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp CCTTTGCACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTCATGAGTGGCCAGTTTaGAGATATAGTGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: PLHSSERPQLPQCYHQGTHEWPV*RYSAGG
Trigger: TCCCCCTGCACTATATCTGCAAACTGGCCACTCATG...AGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTGCAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR GCA 90 bp GGGTTAGAAGGTGCCAGGGGGTATTCTAGGGTAGAAGTTTTGATAGTACGGAAGCGTGCCAGAGGTAGTTaGCACTCCTCTCATGAAAGA +
Preference number: 4 (lower is better)
Translates to: GLEGARGYSRVEVLIVRKRARGS*HSSHER
Trigger: TCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACG...CTTCCGTACTATCAAAACTTCTACCCTAGAATACCCCCTGGCACCTTCTAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642952.1
ENST00000675695.1
CDS-3UTR GCA 90 bp TTTAAGTCTCAAGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACCTAGACAAGTTCCACTaGTCAGCCAGAATGGTACTC +
Preference number: 4 (lower is better)
Translates to: FKSQVAVPEVVATPLMKDLDKFH*SARMVL
Trigger: GAGTACCATTCTGGCTGAGCAGTGGAACTTGTCTAG...GTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCCACTTGAGACTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR GCA 90 bp GCCTGGCCTTCAGATTCTAGAGAAGGCTTTTGTTTCCCCAAGTTAGGGTGGAACCTGTTTTGGCCTGAGTaGCTCCATTCCACATGTGAT +
Preference number: 4 (lower is better)
Translates to: AWPSDSREGFCFPKLGWNLFWPE*LHSTCD
Trigger: ATCACATGTGGAATGGAGGCACTCAGGCCAAAACAG...GTTCCACCCTAACTTGGGGAAACAAAAGCCTTCTCTAGAATCTGAAGGCCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp GTCAATGTGTTCTTTAAGTCTCAAGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTGTTTTGGCCTGAGTaGCTCCATTCCACATGTGAT +
Preference number: 4 (lower is better)
Translates to: VNVFFKSQVAVPEVVATPLFWPE*LHSTCD
Trigger: ATCACATGTGGAATGGAGGCACTCAGGCCAAAACAG...AGGAGTGGCAACTACCTCTGGCACGGCCACTTGAGACTTAAAGAACACATTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR GCA 90 bp CAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTCAGTCTGTTTTGGCCTGAGTaGCTCCATTCCACATGTGAT +
Preference number: 4 (lower is better)
Translates to: QVDRMSGQFADIVQGDFSLFWPE*LHSTCD
Trigger: ATCACATGTGGAATGGAGGCACTCAGGCCAAAACAG...ACTGAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR GCA 90 bp CAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTAGGCCTGTTTTGGCCTGAGTaGCTCCATTCCACATGTGAT +
Preference number: 4 (lower is better)
Translates to: QRVSLSRLAGDLYSQSLGLFWPE*LHSTCD
Trigger: ATCACATGTGGAATGGAGGCACTCAGGCCAAAACAG...GCCTAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR GCA 90 bp GTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATCGCATGACATACCAGCTTAAATaGCCAGAAGAGGAGTGGGTT +
Preference number: 4 (lower is better)
Translates to: VPEVVATPLMKDYQVDRMTYQLK*PEEEWV
Trigger: AACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGT...CATGCGATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
CDS-3UTR GCA 90 bp GGGATGGGTAAGATCTCCTGGCAAAGAATGGGAGTCCCAATTGGAAATGGGGAGAGAAGTCTGAGTTCTTaGCCCATCGACATTCAACAG +
Preference number: 4 (lower is better)
Translates to: GMGKISWQRMGVPIGNGERSLSS*PIDIQQ
Trigger: CTGTTGAATGTCGATGGGGCAAGAACTCAGACTTCT...CTCCCCATTTCCAATTGGGACTCCCATTCTTTGCCAGGAGATCTTACCCATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp GGGATGGGTAAGATCTCCTGGCAAAGAATGGGAGTCCCAATTGGAAATGGGGAGGGAGACATTCATGGGTaGCTAACTACCAACAAGTTG +
Preference number: 4 (lower is better)
Translates to: GMGKISWQRMGVPIGNGEGDIHG*LTTNKL
Trigger: CAACTTGTTGGTAGTTAGGCACCCATGAATGTCTCC...CTCCCCATTTCCAATTGGGACTCCCATTCTTTGCCAGGAGATCTTACCCATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp AGAGCGCTTCCAGTCCCACGTCTTTACAGGAATCTTCCAGGTCTTACCATAGTTCCAGATATCAGTAGCTaGAGCAGAGGAGAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: RALPVPRLYRNLPGLTIVPDISS*SRGEKD
Trigger: GTCCTTCTCTCCTCTGCTGCAGCTACTGATATCTGG...AACTATGGTAAGACCTGGAAGATTCCTGTAAAGACGTGGGACTGGAAGCGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp CTAGCCCAGGTCTTAATGATAGTGGAAGACAAGGAGGAAAGAGGGAACGTTGCTCCAGATATCAGTAGCTaGAGCAGAGGAGAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: LAQVLMIVEDKEERGNVAPDISS*SRGEKD
Trigger: GTCCTTCTCTCCTCTGCTGCAGCTACTGATATCTGG...AGCAACGTTCCCTCTTTCCTCCTTGTCTTCCACTATCATTAAGACCTGGGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp GTAACTCTGGCCTGTCAAAAGCTCCTGGATAACGACCAAACTGTAACTTTCGGAGCTCACTGCAGACTCTaGTTCCCGGGTTCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: VTLACQKLLDNDQTVTFGAHCRL*FPGSSD
Trigger: ATCACTTGAACCCGGGAAGCAGAGTCTGCAGTGAGC...TCCGAAAGTTACAGTTTGGTCGTTATCCAGGAGCTTTTGACAGGCCAGAGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000642952.1
CDS-3UTR GCA 90 bp CCTGCTGATTCTTGCCATAGTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTAGCTCACTGCAGACTCTaGTTCCCGGGTTCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: PADSCHSWLQCIRGFHRVAHCRL*FPGSSD
Trigger: ATCACTTGAACCCGGGAAGCAGAGTCTGCAGTGAGC...TACCCTGTGAAACCCTCGAATACATTGAAGCCAACTATGGCAAGAATCAGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642952.1
ENST00000644273.1
CDS-3UTR GCA 90 bp AGGCCAGATTCCATTGGGTTGCACATTGGGAGGAGAGCGCTTCCAGTCCCACGTTACCGACTGGAAACGTaGTATCTTCAAAAGCATAAA +
Preference number: 4 (lower is better)
Translates to: RPDSIGLHIGRRALPVPRYRLET*YLQKHK
Trigger: TTTATGCTTTTGAAGATAGCACGTTTCCAGTCGGTA...ACGTGGGACTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATGGAATCTGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS-3UTR GCA 90 bp GCGCTTCCAGTCCCACGTCTTTACAGGAATCTTCCAGGTCTTACCATAGTTGGCCTTGTCAGAACACCCTaGACTTCCTTTCCACTAAGA +
Preference number: 4 (lower is better)
Translates to: ALPVPRLYRNLPGLTIVGLVRTP*TSFPLR
Trigger: TCTTAGTGGAAAGGAAGTGCAGGGTGTTCTGACAAG...GCCAACTATGGTAAGACCTGGAAGATTCCTGTAAAGACGTGGGACTGGAAGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS-3UTR CCA 90 bp GTGTTCTTTAAGTCTCAAGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAGTGGATCGCATGAGTaGCCAGTTTGCAGATATAGT +
Preference number: 4 (lower is better)
Translates to: VFFKSQVAVPEVVATPLMSGSHE*PVCRYS
Trigger: ACTATATCTGCAAACTGGCCACTCATGCGATCCACT...CATGAGAGGAGTGGCAACTACCTCTGGCACGGCCACTTGAGACTTAAAGAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CCA 90 bp CTAAGCGGCAGAAACACCCTGAGACTTAGCCTCAATGAAGCACTGGATGCCTTCGTGCATTGGATCCTTTaGAATGAGAACTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: LSGRNTLRLSLNEALDAFVHWIL*NENFQS
Trigger: GGACTGGAAGTTCTCATTCCAAAGGATCCAATGCAC...GAAGGCATCCAGTGCTTCATTGAGGCTAAGTCTCAGGGTGTTTCTGCCGCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GTGTTCTTTAAGTCTCAAGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGGTGCATTGGATCCTTTaGAATGAGAACTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: VFFKSQVAVPEVVATPLMVHWIL*NENFQS
Trigger: GGACTGGAAGTTCTCATTCCAAAGGATCCAATGCAC...CATGAGAGGAGTGGCAACTACCTCTGGCACGGCCACTTGAGACTTAAAGAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CCA 90 bp ATTCCTTTGCACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTCATTGGGTTGCACATTaGGAGGAGAGCGCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: IPLHSSERPQLPQCYHQGHWVAH*EESASS
Trigger: ACTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATG...ACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTGCAAAGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
CDS-3UTR CCA 90 bp ACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTGCTGAAAGAACTCTTCAAAGGGTaGGGGAGGGTTCCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: TLPKGHSFHSVIIKVLLKELFKG*GRVPSK
Trigger: CTTTGAGGGAACCCTCCCCCACCCTTTGAAGAGTTC...TTTCAGCAGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
CDS-3UTR CCA 90 bp TTTGCACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTGCCTAACCCAAGGTCTCTaGACACTCCACAGAACCCAA +
Preference number: 4 (lower is better)
Translates to: FALFRKATASTVLSSRYCLTQGL*TLHRTQ
Trigger: TTGGGTTCTGTGGAGTGTCCAGAGACCTTGGGTTAG...GCAGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GGAGACATTCATGGGTGCCTAACTACCAACAAGTTGTCAACTTCCCCAGGTAAGCTAACCCAAGGTCTCTaGACACTCCACAGAACCCAA +
Preference number: 4 (lower is better)
Translates to: GDIHGCLTTNKLSTSPGKLTQGL*TLHRTQ
Trigger: TTGGGTTCTGTGGAGTGTCCAGAGACCTTGGGTTAG...CTTACCTGGGGAAGTTGACAACTTGTTGGTAGTTAGGCACCCATGAATGTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATCGCATGAGTGGCCTCTGGAGACATTCATaGGTGCCTAACTACCAACAA +
Preference number: 4 (lower is better)
Translates to: EVVATPLMKDYQVDRMSGLWRHS*VPNYQQ
Trigger: TTGTTGGTAGTTAGGCACCCATGAATGTCTCCAGAG...GCCACTCATGCGATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR CCA 90 bp AGCTTGTGGTCTTTTTATGGCAACACATTGCCTTCCCTGAGTGAGATGTTAGAGAGCCTCCTGTGTAGCTaGGACTATAGGCGTGCACCA +
Preference number: 4 (lower is better)
Translates to: SLWSFYGNTLPSLSEMLESLLCS*DYRRAP
Trigger: TGGTGCACGCCTATAGTCCCAGCTACACAGGAGGCT...CTCTAACATCTCACTCAGGGAAGGCAATGTGTTGCCATAAAAAGACCACAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR CCA 90 bp TTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGGTAGTCCCAGCTACTTaGGGGTCTGAGCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: FRKGTNFLSMCSLSLKWPVVPAT*GSEPGG
Trigger: TCCTCCTGGCTCAGACCCCCAAGTAGCTGGGACTAC...CGGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCCCTTCCGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675443.1
ENST00000675736.1
CDS-3UTR CCA 90 bp CAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTAGGCTGGACACAGCTTTCTTaGCAGGGAACCCCAGAAAAT +
Preference number: 4 (lower is better)
Translates to: QRVSLSRLAGDLYSQSLGWTQLS*QGTPEN
Trigger: ATTTTCTGGGGTTCCCTGCCAAGAAAGCTGTGTCCA...GCCTAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CCA 90 bp CAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTCAGTTTTTCGTATCCCTCGTaGACACAGCTTTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: QVDRMSGQFADIVQGDFSFSYPS*TQLSWQ
Trigger: CTGCCAAGAAAGCTGTGTCCACGAGGGATACGAAAA...ACTGAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR TCA 90 bp AGGATCTGTGTGCGAGTGGACAAGGACTCAGAGAAAGGACAAGGGCTACAGAGAGCTTCCTTTGGATTTTaGCAAACCAGCTCCATTCTT +
Preference number: 4 (lower is better)
Translates to: RICVRVDKDSEKGQGLQRASFGF*QTSSIL
Trigger: AAGAATGGAGCTGGTTTGTCAAAATCCAAAGGAAGC...TCTCTGTAGCCCTTGTCCTTTCTCTGAGTCCTTGTCCACTCGCACACAGATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR TCA 90 bp CAAGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGTCAATCTTTAGGCACTaGAATCCCATATTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: QVAVPEVVATPLMKDYQVSIFRH*NPIFSA
Trigger: AGCTGAGAATATGGGATTTCAGTGCCTAAAGATTGA...CACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCCACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR TCA 90 bp AAGGACAAGGGCTACAGAGAAAGGAGCCCGATTGTGTTGACATCCTGGGACCAGTCAATCTTTAGGCACTaGAATCCCATATTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: KDKGYRERSPIVLTSWDQSIFRH*NPIFSA
Trigger: AGCTGAGAATATGGGATTTCAGTGCCTAAAGATTGA...CTGGTCCCAGGATGTCAACACAATCGGGCTCCTTTCTCTGTAGCCCTTGTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR TCA 90 bp GGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGTGCCAGAGGACCAAGTGGATCGCATaGGTGGCCAGTTTGCAGATA +
Preference number: 4 (lower is better)
Translates to: GTNFLSMCSLSLKWPCQRTKWIA*VASLQI
Trigger: TATCTGCAAACTGGCCACTCATGCGATCCACTTGGT...CCTCTGGCACGGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR TCA 90 bp TTTTCGCTGCTAGTTGCAGTAATTCCTTTGCACTCTTCCGAAAGGCCACAGCTTACCAAGTGGATCGCATaGGTGGCCAGTTTGCAGATA +
Preference number: 4 (lower is better)
Translates to: FSLLVAVIPLHSSERPQLTKWIA*VASLQI
Trigger: TATCTGCAAACTGGCCACTCATGCGATCCACTTGGT...AAGCTGTGGCCTTTCGGAAGAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR TCA 90 bp GAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATCGCATGAGTGGCTTGGATCCTTTGGAATaGGAACTTCCAGTCCATCAA +
Preference number: 4 (lower is better)
Translates to: EVVATPLMKDYQVDRMSGLDPLE*ELPVHQ
Trigger: TTGATGGACTGGAAGTTCTCATTCCAAAGGATCCAA...GCCACTCATGCGATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR TCA 90 bp TTTCAGTTCCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCCCAAATTTGTGTTTaGGCGGAAGTCCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: FQFQRVSLSRLAGDLYSQSQICV*AEVLHP
Trigger: AGGATGCAGGACTTCCGCTCAAACACAAATTTGGGA...TTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAACTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR TCA 90 bp ATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCAACCTGTACAGAACTTaGACTCTTCAAAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: IRGFHRVHGPSCLQTQSSNLYRT*TLQRVG
Trigger: CCCCACCCTTTGAAGAGTTCAAGTTCTGTACAGGTT...GCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACAGTGTCTTAGCTTTGCCTGGTaGGCTCATCTTCCAGTTCAA +
Preference number: 4 (lower is better)
Translates to: GFTGYMDLHVYKLSPAQCLSFAW*AHLPVQ
Trigger: TTGAACTGGAAGATGAGCTCACCAGGCAAAGCTAAG...ACACTGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTAGGCACTGAAGGTAAAGTAGAAGTCTaGGTTCTTGCCCCATCGACA +
Preference number: 4 (lower is better)
Translates to: VSLSRLAGDLYSQSLGTEGKVEV*VLAPST
Trigger: TGTCGATGGGGCAAGAACTCAGACTTCTACTTTACC...TTCAGTGCCTAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GACCTCTCTGTCGCCTTAGGTTCTCAATCTGAACAAAAAGATACTAAGCGGCAGAAACAGCATCCTAGCTaGCTCAGACATCTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: DLSVALGSQSEQKDTKRQKQHPS*LRHLEG
Trigger: CCCCTCAAGATGTCTGAGTCAGCTAGGATGCTGTTT...CTGCCGCTTAGTATCTTTTTGTTCAGATTGAGAACCTAAGGCGACAGAGAGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CCAGCACAGTGTAAACTTCGGAAACAGGTATCTTTCAAACTTCTGGCTTCTACCTTAGGGTGGAACCCATaGGCTGAAGCCTGTGAAACC +
Preference number: 4 (lower is better)
Translates to: PAQCKLRKQVSFKLLASTLGWNP*AEACET
Trigger: GGTTTCACAGGCTTCAGCTCATGGGTTCCACCCTAA...GGTAGAAGCCAGAAGTTTGAAAGATACCTGTTTCCGAAGTTTACACTGTGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp AGAGGAGAGAAGGACAAGTGCTCCCTGCTTAGAGAGGACTGGGTGACTACCTGGAAGATGAAGTATGGATaGATCAGAATCAGAGGTAAG +
Preference number: 4 (lower is better)
Translates to: RGEKDKCSLLREDWVTTWKMKYG*IRIRGK
Trigger: CTTACCTCTGATTCTGATTCATCCATACTTCATCTT...CCAGGTAGTCACCCAGTCCTCTCTAAGCAGGGAGCACTTGTCCTTCTCTCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp AGGTCTTACCATAGTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGAGCGGCAGAAACACCCTaGGACTTAGCCTCAATGAAG +
Preference number: 4 (lower is better)
Translates to: RSYHSWLQCIRGFHRVHGAAETP*DLASMK
Trigger: CTTCATTGAGGCTAAGTCTCAGGGTGTTTCTGCCGC...TCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCAACTATGGTAAGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CCTTTGCACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTTTAGCAGGTTGGTGCTaGTGGTTCCCTTGGGAAATA +
Preference number: 4 (lower is better)
Translates to: PLHSSERPQLPQCYHQGTLAGWC*WFPWEI
Trigger: TATTTCCCAAGGGAACCATCAGCACCAACCTGCTAA...AGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTGCAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR TCA 90 bp AGAAATAGGCCAGATTCCATTGGGTTGCACATTGGGAGGAGAGCGCTTCCAGTCGAAAGGCTAGAATATTaGAAAAGAAGTCCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: RNRPDSIGLHIGRRALPVERLEY*KRSPGE
Trigger: CTCCCCTGGACTTCTTTTTCAATATTCTAGCCTTTC...GACTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATGGAATCTGGCCTATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GCCTCCTTTAAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTCTCTATCGCCCAGGCTaGAGTGCAATGCCGCGATCT +
Preference number: 4 (lower is better)
Translates to: ASFKHRTYTKGIAIELVCLYRPG*SAMPRS
Trigger: AGATCGCGGCATTGCACTTCAGCCTGGGCGATAGAG...ACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTTAAAGGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642952.1
ENST00000644273.1
ENST00000675695.1
CDS-3UTR TCA 90 bp ACAGCAAACTCCCTTAGGACAGGAAGAGCGGTCAAGTTTAAGCACAAAACTCCAGCCTGGGTGACAAAGTaGGACCCTCATTCTTCCATA +
Preference number: 4 (lower is better)
Translates to: TANSLRTGRAVKFKHKTPAWVTK*DPHSSI
Trigger: TATGGAAGAATGAGGGTCTCACTTTGTCACCCAGGC...TGGAGTTTTGTGCTTAAACTTGACCGCTCTTCCTGTCCTAAGGGAGTTTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675443.1
CDS-3UTR TCA 90 bp CAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTCAGTTACCTATGGGGAAGATaGAAACCTTCACACACTTCC +
Preference number: 4 (lower is better)
Translates to: QVDRMSGQFADIVQGDFSYLWGR*KPSHTS
Trigger: GGAAGTGTGTGAAGGTTTTCATCTTCCCCATAGGTA...ACTGAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642952.1
ENST00000645933.1
CDS-3UTR TCA 90 bp AGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATCTACCCATACCAGTTaGTTCAAAATGGGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: SGRARGSCHSSHERLPSGSTHTS*FKMGRK
Trigger: TTTCCTTCCCATTTTGAATCAACTGGTATGGGTAGA...TCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
CDS-3UTR GCA 90 bp CTGAGACTTTGGGGTTGTTTGTCACACCGCCACCCACCTTACCCACCTCCAAAAATACTGCAGTGCAAATaGAGTAAAGTCTCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: LRLWGCLSHRHPPYPPPKILQCK*SKVSWN
Trigger: GTTCCAAGAGACTTTACTGCATTTGCACTGCAGTAT...TTTTGGAGGTGGGTAAGGTGGGTGGCGGTGTGACAAACAACCCCAAAGTCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR GCA 90 bp GTAACTCTGGCCTGTCAAAAGCTCCTGGATAACGACCAAACTGTAACTTTCGGACATGAGTGGCCAGTTTaGAGATATAGTGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: VTLACQKLLDNDQTVTFGHEWPV*RYSAGG
Trigger: TCCCCCTGCACTATATCTGCAAACTGGCCACTCATG...TCCGAAAGTTACAGTTTGGTCGTTATCCAGGAGCTTTTGACAGGCCAGAGTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR GCA 90 bp ACAGCAAACTCCCTTAGGACAGGAAGAGCGGTCAAGTTTAAGCACAAAACTCCACGTGCCAGAGGTAGTTaGCACTCCTCTCATGAAAGA +
Preference number: 4 (lower is better)
Translates to: TANSLRTGRAVKFKHKTPRARGS*HSSHER
Trigger: TCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACG...TGGAGTTTTGTGCTTAAACTTGACCGCTCTTCCTGTCCTAAGGGAGTTTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR GCA 90 bp TGCAGGGGGATTTCAGTTCCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTACTTCTTCTACAAAGTaGATTGGATCCTTTGGAATG +
Preference number: 4 (lower is better)
Translates to: CRGISVPESESIPSSRGSTSSTK*IGSFGM
Trigger: CATTCCAAAGGATCCAATGCACTTTGTAGAAGAAGT...AGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAACTGAAATCCCCCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR GCA 90 bp CAAGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGTACTGCTGAAAGAATaGTCGAGCTTCTTTATACCT +
Preference number: 4 (lower is better)
Translates to: QVAVPEVVATPLMKDYQVVLLKE*SSFFIP
Trigger: AGGTATAAAGAAGCTCGAGCATTCTTTCAGCAGTAC...CACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCCACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR GCA 90 bp GTGTTCTTTAAGTCTCAAGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGGTTTTCGCTGCTAGTTaGAGTAATTCCTTTGCACTC +
Preference number: 4 (lower is better)
Translates to: VFFKSQVAVPEVVATPLMVFAAS*SNSFAL
Trigger: GAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAAC...CATGAGAGGAGTGGCAACTACCTCTGGCACGGCCACTTGAGACTTAAAGAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR GCA 90 bp ACTTCCCCAGGTAAGCCAGGTAAACTAAACCTGAAAGTGGTCAGATTAGGAGAAGGAGAGAAGGACAAGTaGTCCCTGCTTAGAGAGGAC +
Preference number: 4 (lower is better)
Translates to: TSPGKPGKLNLKVVRLGEGEKDK*SLLRED
Trigger: GTCCTCTCTAAGCAGGGAGCACTTGTCCTTCTCTCC...TTCTCCTAATCTGACCACTTTCAGGTTTAGTTTACCTGGCTTACCTGGGGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp AGGTCTTACCATAGTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGAGGAGAGAAGGACAAGTaGTCCCTGCTTAGAGAGGAC +
Preference number: 4 (lower is better)
Translates to: RSYHSWLQCIRGFHRVHGGEKDK*SLLRED
Trigger: GTCCTCTCTAAGCAGGGAGCACTTGTCCTTCTCTCC...TCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCAACTATGGTAAGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp AGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGAAAAGTGGCAATGGGATaGATCTTGAGCTTAGAGAAT +
Preference number: 4 (lower is better)
Translates to: SGRARGSCHSSHERLPSGKVAMG*ILSLEN
Trigger: ATTCTCTAAGCTCAAGATGCATCCCATTGCCACTTT...TCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR GCA 90 bp AATGTGTTCTTTAAGTCTCAAGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCCTTAAAATGGCATCATaGACCCTGCTGATTCTTGCC +
Preference number: 4 (lower is better)
Translates to: NVFFKSQVAVPEVVATPLLKMAS*TLLILA
Trigger: GGCAAGAATCAGCAGGGTGCATGATGCCATTTTAAG...GAGAGGAGTGGCAACTACCTCTGGCACGGCCACTTGAGACTTAAAGAACACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000642952.1
CDS-3UTR GCA 90 bp AAAACTGACCCTACTGGATCTTTTCTTTATGCCAGGTACAGTAGATACTGGGCCAGTGAGCCAAGATTGTaGCACTGCACTCAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: KTDPTGSFLYARYSRYWASEPRL*HCTQAW
Trigger: CCAGGCTTGAGTGCAGTGGCACAATCTTGGCTCACT...GGCCCAGTATCTACTGTACCTGGCATAAAGAAAAGATCCAGTAGGGTCAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675443.1
CDS-3UTR GCA 90 bp AGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGAAAAAAGAAAGGCGGCTaGTTGATGAGGTCTATTAGA +
Preference number: 4 (lower is better)
Translates to: SGRARGSCHSSHERLPSGKKKGG*LMRSIR
Trigger: TCTAATAGACCTCATCAAGCAGCCGCCTTTCTTTTT...TCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCCACT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR GCA 90 bp CGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCTACACACTCAACAGCAGGCTaGAGCCGCTCCGCTTTACGG +
Preference number: 4 (lower is better)
Translates to: RASLYLHSINLECGTSSTHSTAG*SRSALR
Trigger: CCGTAAAGCGGAGCGGCTGCAGCCTGCTGTTGAGTG...TGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675443.1
CDS-3UTR CCA 90 bp GTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATCGCATGCAATTCGGCTTCCTTTaGATTTTGACAAACCAGCTC +
Preference number: 4 (lower is better)
Translates to: VPEVVATPLMKDYQVDRMQFGFL*ILTNQL
Trigger: GAGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTG...CATGCGATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CCA 90 bp TCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACAGTGGATCGCATGAGTaGCCAGTTTGCAGATATAGT +
Preference number: 4 (lower is better)
Translates to: SRVSQGTWTFMSTNSVQHSGSHE*PVCRYS
Trigger: ACTATATCTGCAAACTGGCCACTCATGCGATCCACT...GTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp AATGTGTTCTTTAAGTCTCAAGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCAGTGGATCGCATGAGTaGCCAGTTTGCAGATATAGT +
Preference number: 4 (lower is better)
Translates to: NVFFKSQVAVPEVVATPLSGSHE*PVCRYS
Trigger: ACTATATCTGCAAACTGGCCACTCATGCGATCCACT...GAGAGGAGTGGCAACTACCTCTGGCACGGCCACTTGAGACTTAAAGAACACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CCA 90 bp GGCATATGGCTGGGGGAATCTTCCAAAGAAACTACTCTACTCAGCCATCTCCTGAGTGGATCGCATGAGTaGCCAGTTTGCAGATATAGT +
Preference number: 4 (lower is better)
Translates to: GIWLGESSKETTLLSHLLSGSHE*PVCRYS
Trigger: ACTATATCTGCAAACTGGCCACTCATGCGATCCACT...CAGGAGATGGCTGAGTAGAGTAGTTTCTTTGGAAGATTCCCCCAGCCATATGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR CCA 90 bp GAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTAGGCACAGTGGATCGCATGAGTaGCCAGTTTGCAGATATAGT +
Preference number: 4 (lower is better)
Translates to: ESESIPSSRGSLLSIFRHSGSHE*PVCRYS
Trigger: ACTATATCTGCAAACTGGCCACTCATGCGATCCACT...GTGCCTAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CCA 90 bp GAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTAGGCACGTGCATTGGATCCTTTaGAATGAGAACTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: ESESIPSSRGSLLSIFRHVHWIL*NENFQS
Trigger: GGACTGGAAGTTCTCATTCCAAAGGATCCAATGCAC...GTGCCTAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CCA 90 bp TCATCAACTTGGACTGACAAACCCAGGGACACTTCCTCCTCACAAACCGTCCTTGTGCATTGGATCCTTTaGAATGAGAACTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: SSTWTDKPRDTSSSQTVLVHWIL*NENFQS
Trigger: GGACTGGAAGTTCTCATTCCAAAGGATCCAATGCAC...AAGGACGGTTTGTGAGGAGGAAGTGTCCCTGGGTTTGTCAGTCCAAGTTGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR CCA 90 bp CTGTCAAATAGGATCTGTGTGCGAGTGGACAAGGACTCAGAGAAAGGACAAGGGGTGCATTGGATCCTTTaGAATGAGAACTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: LSNRICVRVDKDSEKGQGVHWIL*NENFQS
Trigger: GGACTGGAAGTTCTCATTCCAAAGGATCCAATGCAC...CCCTTGTCCTTTCTCTGAGTCCTTGTCCACTCGCACACAGATCCTATTTGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR CCA 90 bp GTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATCGCATGACATCATCTTTTCCCTaGAAGGATAGTTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: VPEVVATPLMKDYQVDRMTSSFP*KDSSKL
Trigger: CAGCTTGGAACTATCCTTCCAGGGAAAAGATGATGT...CATGCGATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR CCA 90 bp GGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTCAGTTCCAGACATCATCTTTTCCCTaGAAGGATAGTTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: GSHEWPVCRYSAGGFQFQTSSFP*KDSSKL
Trigger: CAGCTTGGAACTATCCTTCCAGGGAAAAGATGATGT...CTGGAACTGAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR CCA 90 bp CAGGTACCAAATCTAGTGAAGTACAGTAAACTGCTTGGGACCAGCAAACTAGGTCATTGGGTTGCACATTaGGAGGAGAGCGCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: QVPNLVKYSKLLGTSKLGHWVAH*EESASS
Trigger: ACTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATG...ACCTAGTTTGCTGGTCCCAAGCAGTTTACTGTACTTCACTAGATTTGGTACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp ATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCGAACTCTTCAAAGGGTaGGGGAGGGTTCCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: MYSRVSQGTWTFMSTNSVELFKG*GRVPSK
Trigger: CTTTGAGGGAACCCTCCCCCACCCTTTGAAGAGTTC...GACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GGAGACATTCATGGGTGCCTAACTACCAACAAGTTGTCAACTTCCCCAGGTAAGCTGAGCACAAGCAAATaGTCCTCATCAAGTAGGGTG +
Preference number: 4 (lower is better)
Translates to: GDIHGCLTTNKLSTSPGKLSTSK*SSSSRV
Trigger: CACCCTACTTGATGAGGACCATTTGCTTGTGCTCAG...CTTACCTGGGGAAGTTGACAACTTGTTGGTAGTTAGGCACCCATGAATGTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGTGCCAGAGGCTAACCCAAGGTCTCTaGACACTCCACAGAACCCAA +
Preference number: 4 (lower is better)
Translates to: GTNFLSMCSLSLKWPCQRLTQGL*TLHRTQ
Trigger: TTGGGTTCTGTGGAGTGTCCAGAGACCTTGGGTTAG...CCTCTGGCACGGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACCTCTCAGGATGTCTCTaGAGACATTCATGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: VGFNVFEGFTGYMDLHVYLSGCL*RHSWVP
Trigger: AGGCACCCATGAATGTCTCCAGAGACATCCTGAGAG...GTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp CGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACAGACTGGGTGACTACCTaGTTGTCCTGGTTATCAATT +
Preference number: 4 (lower is better)
Translates to: RGFHRVHGPSCLQTQSSTDWVTT*LSWLSI
Trigger: AATTGATAACCAGGACAACCAGGTAGTCACCCAGTC...TGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp ACTTCCCCAGGTAAGCCAGGTAAACTAAACCTGAAAGTGGTCAGATTAGGAGAACTGCTTAGAGAGGACTaGGTGACTACCTGGTTGTCC +
Preference number: 4 (lower is better)
Translates to: TSPGKPGKLNLKVVRLGELLRED*VTTWLS
Trigger: GGACAACCAGGTAGTCACCCAGTCCTCTCTAAGCAG...TTCTCCTAATCTGACCACTTTCAGGTTTAGTTTACCTGGCTTACCTGGGGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GACTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATCTTGTGGTCTTTTTATaGCAACACATTGCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: DYQVDRMSGQFADIVQGDLVVFL*QHIAFP
Trigger: AGGGAAGGCAATGTGTTGCCATAAAAAGACCACAAG...ATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR CCA 90 bp CCACGTCTTTACAGGAATCTTCCAGGTCTTACCATAGTTGGCTTCAATGTATTCAGCCTCCTGTGTAGCTaGGACTATAGGCGTGCACCA +
Preference number: 4 (lower is better)
Translates to: PRLYRNLPGLTIVGFNVFSLLCS*DYRRAP
Trigger: TGGTGCACGCCTATAGTCCCAGCTACACAGGAGGCT...GAATACATTGAAGCCAACTATGGTAAGACCTGGAAGATTCCTGTAAAGACGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675695.1
CDS-3UTR CCA 90 bp GTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACAGTGTATCTCATCAAAAAGCTTaGCCTCCCGAAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: VSQGTWTFMSTNSVQHSVSHQKA*PPEVLG
Trigger: TCCCAGCACTTCGGGAGGCCAAGCTTTTTGATGAGA...TACACTGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642177.1
ENST00000642537.1
ENST00000644273.1
CDS-3UTR CCA 90 bp ATTATAATACAAGTGCAAGGGTGGAGGAGAGGGCAGCCCAGACAAATACAACTGGGATCTGTGTGCGAGTaGACAAGGACTCAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: IIIQVQGWRRGQPRQIQLGSVCE*TRTQRK
Trigger: CTTTCTCTGAGTCCTTGTCCACTCGCACACAGATCC...CAGTTGTATTTGTCTGGGCTGCCCTCTCCTCCACCCTTGCACTTGTATTATAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR CCA 90 bp AAGTCACTGAGACTTTGGGGTTGTTTGTCACACCGCCACCCACCTTACCCACCTGATTGGAGGGTGGATTaGGGAAAATTAGTTGGTAAA +
Preference number: 4 (lower is better)
Translates to: KSLRLWGCLSHRHPPYPPDWRVD*GKLVGK
Trigger: TTTACCAACTAATTTTCCCCAATCCACCCTCCAATC...AGGTGGGTAAGGTGGGTGGCGGTGTGACAAACAACCCCAAAGTCTCAGTGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR CCA 90 bp GTCCTGAATGCGAGAGAGTGTGAAATTAGAGTTAGGGACAGAAAGGTAGAAGATATACAAGTGCAAGGGTaGAGGAGAGGGCAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: VLNARECEIRVRDRKVEDIQVQG*RRGQPR
Trigger: TCTGGGCTGCCCTCTCCTCCACCCTTGCACTTGTAT...ATCTTCTACCTTTCTGTCCCTAACTCTAATTTCACACTCTCTCGCATTCAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR CCA 90 bp GAATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCCTACGAAGGCCCACTTaGGCTGTCAGGCCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: ECSSFFIPTLNKPRVWYFLRRPT*AVRPQL
Trigger: AAGCTGAGGCCTGACAGCCCAAGTGGGCCTTCGTAG...GAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CCA 90 bp TTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTCCATTCGAAGGACTGGCCAAGTaGAAGTCTACCACGCGATGC +
Preference number: 4 (lower is better)
Translates to: LFSKKSTSPFPQTFRFPFEGLAK*KSTTRC
Trigger: GCATCGCGTGGTAGACTTCCACTTGGCCAGTCCTTC...GAATGGAAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS-3UTR TCA 90 bp CGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACAGCTTCCTTTGGATTTTaGCAAACCAGCTCCATTCTT +
Preference number: 4 (lower is better)
Translates to: RGFHRVHGPSCLQTQSSTASFGF*QTSSIL
Trigger: AAGAATGGAGCTGGTTTGTCAAAATCCAAAGGAAGC...TGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp TTTAAGTCTCAAGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACGCTTCCTTTGGATTTTaGCAAACCAGCTCCATTCTT +
Preference number: 4 (lower is better)
Translates to: FKSQVAVPEVVATPLMKDASFGF*QTSSIL
Trigger: AAGAATGGAGCTGGTTTGTCAAAATCCAAAGGAAGC...GTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCCACTTGAGACTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR TCA 90 bp AATGTGTTCTTTAAGTCTCAAGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCTCATTCTTCCATAGGTaGTACTGCAGTGCAAATGCA +
Preference number: 4 (lower is better)
Translates to: NVFFKSQVAVPEVVATPLSFFHR*YCSANA
Trigger: TGCATTTGCACTGCAGTATCACCTATGGAAGAATGA...GAGAGGAGTGGCAACTACCTCTGGCACGGCCACTTGAGACTTAAAGAACACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR TCA 90 bp ATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCACCAAGTGGATCGCATaGGTGGCCAGTTTGCAGATA +
Preference number: 4 (lower is better)
Translates to: MYSRVSQGTWTFMSTNSVTKWIA*VASLQI
Trigger: TATCTGCAAACTGGCCACTCATGCGATCCACTTGGT...GACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp TGGGGGAATCTTCCAAAGAAACTACTCTACTCAGCCATCTCCTGTTCTTTTCTCACCAAGTGGATCGCATaGGTGGCCAGTTTGCAGATA +
Preference number: 4 (lower is better)
Translates to: WGNLPKKLLYSAISCSFLTKWIA*VASLQI
Trigger: TATCTGCAAACTGGCCACTCATGCGATCCACTTGGT...GAGAAAAGAACAGGAGATGGCTGAGTAGAGTAGTTTCTTTGGAAGATTCCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR TCA 90 bp GTAACTCTGGCCTGTCAAAAGCTCCTGGATAACGACCAAACTGTAACTTTCGGATTGCCACTCCTCTCATaGAAGACTACCAAGTGGATC +
Preference number: 4 (lower is better)
Translates to: VTLACQKLLDNDQTVTFGLPLLS*KTTKWI
Trigger: GATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAA...TCCGAAAGTTACAGTTTGGTCGTTATCCAGGAGCTTTTGACAGGCCAGAGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR TCA 90 bp CGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGTGCTTGCCACTCCTCTCATaGAAGACTACCAAGTGGATC +
Preference number: 4 (lower is better)
Translates to: RKGTNFLSMCSLSLKWPCLPLLS*KTTKWI
Trigger: GATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAA...GCACGGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCCCTTCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR TCA 90 bp TTCCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTATTGCCACTCCTCTCATaGAAGACTACCAAGTGGATC +
Preference number: 4 (lower is better)
Translates to: FQRVSLSRLAGDLYSQSLLPLLS*KTTKWI
Trigger: GATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAA...TAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR TCA 90 bp CAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTCAGTTTGGATCCTTTGGAATaGGAACTTCCAGTCCATCAA +
Preference number: 4 (lower is better)
Translates to: QVDRMSGQFADIVQGDFSLDPLE*ELPVHQ
Trigger: TTGATGGACTGGAAGTTCTCATTCCAAAGGATCCAA...ACTGAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR TCA 90 bp GGCATATGGCTGGGGGAATCTTCCAAAGAAACTACTCTACTCAGCCATCTCCTGTTGGATCCTTTGGAATaGGAACTTCCAGTCCATCAA +
Preference number: 4 (lower is better)
Translates to: GIWLGESSKETTLLSHLLLDPLE*ELPVHQ
Trigger: TTGATGGACTGGAAGTTCTCATTCCAAAGGATCCAA...CAGGAGATGGCTGAGTAGAGTAGTTTCTTTGGAAGATTCCCCCAGCCATATGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR TCA 90 bp CCTGCTGATTCTTGCCATAGTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTATCCCAAATTTGTGTTTaGGCGGAAGTCCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: PADSCHSWLQCIRGFHRVSQICV*AEVLHP
Trigger: AGGATGCAGGACTTCCGCTCAAACACAAATTTGGGA...TACCCTGTGAAACCCTCGAATACATTGAAGCCAACTATGGCAAGAATCAGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642952.1
CDS-3UTR TCA 90 bp ATTATAATACAAGTGCAAGGGTGGAGGAGAGGGCAGCCCAGACAAATACAACTGTCCCAAATTTGTGTTTaGGCGGAAGTCCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: IIIQVQGWRRGQPRQIQLSQICV*AEVLHP
Trigger: AGGATGCAGGACTTCCGCTCAAACACAAATTTGGGA...CAGTTGTATTTGTCTGGGCTGCCCTCTCCTCCACCCTTGCACTTGTATTATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR TCA 90 bp GACCTCTCTGTCGCCTTAGGTTCTCAATCTGAACAAAAAGATACTAAGCGGCAGAACCTGTACAGAACTTaGACTCTTCAAAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: DLSVALGSQSEQKDTKRQNLYRT*TLQRVG
Trigger: CCCCACCCTTTGAAGAGTTCAAGTTCTGTACAGGTT...CTGCCGCTTAGTATCTTTTTGTTCAGATTGAGAACCTAAGGCGACAGAGAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTCAGTTCCAGATGGTCTCACTTGAATaGTTTGTCAACAAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: GSHEWPVCRYSAGGFQFQMVSLE*FVNKCH
Trigger: ATGGCACTTGTTGACAAATCATTCAAGTGAGACCAT...CTGGAACTGAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
CDS-3UTR TCA 90 bp GCCTGGCCTTCAGATTCTAGAGAAGGCTTTTGTTTCCCCAAGTTAGGGTGGAACCTGACTCAGACATCTTaGGGGGAAAAGGAAACTAAA +
Preference number: 4 (lower is better)
Translates to: AWPSDSREGFCFPKLGWNLTQTS*GEKETK
Trigger: TTTAGTTTCCTTTTCCCCTCAAGATGTCTGAGTCAG...GTTCCACCCTAACTTGGGGAAACAAAAGCCTTCTCTAGAATCTGAAGGCCAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACAAACAGCATCCTAGCTaGCTCAGACATCTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: ASMYSRVSQGTWTFMSTNKQHPS*LRHLEG
Trigger: CCCCTCAAGATGTCTGAGTCAGCTAGGATGCTGTTT...GTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CCTCAGACATTCAGGTTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGATTAGGGTGGAACCCATaGGCTGAAGCCTGTGAAACC +
Preference number: 4 (lower is better)
Translates to: PQTFRFPFLRLLLFSGVRLGWNP*AEACET
Trigger: GGTTTCACAGGCTTCAGCTCATGGGTTCCACCCTAA...TCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAACCTGAATGTCTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTAGGCACTGAAGGTGAGATTTTAGACTaGAGTGTGGAAGCTCATTCC +
Preference number: 4 (lower is better)
Translates to: VSLSRLAGDLYSQSLGTEGEILD*SVEAHS
Trigger: GGAATGAGCTTCCACACTTCAGTCTAAAATCTCACC...TTCAGTGCCTAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GCGCTTCCAGTCCCACGTCTTTACAGGAATCTTCCAGGTCTTACCATAGTTGGCAATGTGGCACTTTCTTaGCTAGGTTTTGAGGGAATA +
Preference number: 4 (lower is better)
Translates to: ALPVPRLYRNLPGLTIVGNVALS*LGFEGI
Trigger: TATTCCCTCAAAACCTAGTCAAGAAAGTGCCACATT...GCCAACTATGGTAAGACCTGGAAGATTCCTGTAAAGACGTGGGACTGGAAGCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp ATTCCATTGGGTTGCACATTGGGAGGAGAGCGCTTCCAGTCCCACGTCTTTACAGATTTCAGTCTGATGTaGAGCAGCTTAAAATGGCAT +
Preference number: 4 (lower is better)
Translates to: IPLGCTLGGERFQSHVFTDFSLM*SSLKWH
Trigger: ATGCCATTTTAAGCTGCTTCACATCAGACTGAAATC...TGTAAAGACGTGGGACTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675695.1
CDS-3UTR TCA 90 bp CGACCAAACTGTAACTTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTACTCTATCGCCCAGGCTaGAGTGCAATGCCGCGATCT +
Preference number: 4 (lower is better)
Translates to: RPNCNFRKGTNFLSMCSLLYRPG*SAMPRS
Trigger: AGATCGCGGCATTGCACTTCAGCCTGGGCGATAGAG...TAAAGAACACATTGACAGGAAATTTGTTCCCTTCCGAAAGTTACAGTTTGGTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000642952.1
CDS-3UTR TCA 90 bp GCCTGGCCTTCAGATTCTAGAGAAGGCTTTTGTTTCCCCAAGTTAGGGTGGAACCTATTCCCCATGCTTTaGATGAATCATCAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: AWPSDSREGFCFPKLGWNLFPML*MNHQKA
Trigger: AGCCTTCTGATGATTCATTCAAAGCATGGGGAATAG...GTTCCACCCTAACTTGGGGAAACAAAAGCCTTCTCTAGAATCTGAAGGCCAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000675695.1
CDS-3UTR TCA 90 bp TCTCATGAAAGACTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCCTGGGTGACAAAGTaGGACCCTCATTCTTCCATA +
Preference number: 4 (lower is better)
Translates to: SHERLPSGSHEWPVCRYSAWVTK*DPHSSI
Trigger: TATGGAAGAATGAGGGTCTCACTTTGTCACCCAGGC...ACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTCTTTCATGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675443.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTAGGCACTGAATGGTTGTCTCTAACCTaGAAGAATGCTCGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: VSLSRLAGDLYSQSLGTEWLSLT*KNARAS
Trigger: AGAAGCTCGAGCATTCTTTCAGGTTAGAGACAACCA...TTCAGTGCCTAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR TCA 90 bp GATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTCAGTTCCAGATTATCCTACTTGGACTaGGAATACACCACCTTTCAC +
Preference number: 4 (lower is better)
Translates to: DRMSGQFADIVQGDFSSRLSYLD*EYTTFH
Trigger: GTGAAAGGTGGTGTATTCTCAGTCCAAGTAGGATAA...TCTGGAACTGAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR TCA 90 bp CTAGGCTGTGGAGGGCTCTGGATTCCAGTCGACAAATCCAAAACCCTTGCTGATCTTTTCCCTTGTTTATaGGGTCACATGCCAGAAATT +
Preference number: 4 (lower is better)
Translates to: LGCGGLWIPVDKSKTLADLFPCL*GHMPEI
Trigger: AATTTCTGGCATGTGACCTCATAAACAAGGGAAAAG...ATCAGCAAGGGTTTTGGATTTGTCGACTGGAATCCAGAGCCCTCCACAGCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR TCA 90 bp GGCATATGGCTGGGGGAATCTTCCAAAGAAACTACTCTACTCAGCCATCTCCTGGTTCAGAATAGTGCCTaGCACACAGTAGTATTACTC +
Preference number: 4 (lower is better)
Translates to: GIWLGESSKETTLLSHLLVQNSA*HTVVLL
Trigger: GAGTAATACTACTGTGTGTCAGGCACTATTCTGAAC...CAGGAGATGGCTGAGTAGAGTAGTTTCTTTGGAAGATTCCCCCAGCCATATGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR GCA 90 bp ATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCATGAGTGGCCAGTTTaGAGATATAGTGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: MYSRVSQGTWTFMSTNSVHEWPV*RYSAGG
Trigger: TCCCCCTGCACTATATCTGCAAACTGGCCACTCATG...GACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TCTCATGAAAGACTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTCATGAGTGGCCAGTTTaGAGATATAGTGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: SHERLPSGSHEWPVCRYSHEWPV*RYSAGG
Trigger: TCCCCCTGCACTATATCTGCAAACTGGCCACTCATG...ACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTCTTTCATGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR GCA 90 bp AGGTCTTACCATAGTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACATGAGTGGCCAGTTTaGAGATATAGTGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: RSYHSWLQCIRGFHRVHGHEWPV*RYSAGG
Trigger: TCCCCCTGCACTATATCTGCAAACTGGCCACTCATG...TCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCAACTATGGTAAGACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TACCATAGTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCACGTGCCAGAGGTAGTTaGCACTCCTCTCATGAAAGA +
Preference number: 4 (lower is better)
Translates to: YHSWLQCIRGFHRVHGPSRARGS*HSSHER
Trigger: TCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACG...TGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCAACTATGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp GCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACCGTGCCAGAGGTAGTTaGCACTCCTCTCATGAAAGA +
Preference number: 4 (lower is better)
Translates to: ASMYSRVSQGTWTFMSTNRARGS*HSSHER
Trigger: TCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACG...GTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp ATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCGTGCCAGAGGTAGTTaGCACTCCTCTCATGAAAGA +
Preference number: 4 (lower is better)
Translates to: MYSRVSQGTWTFMSTNSVRARGS*HSSHER
Trigger: TCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACG...GACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TGGGGGAATCTTCCAAAGAAACTACTCTACTCAGCCATCTCCTGTTCTTTTCTCCGTGCCAGAGGTAGTTaGCACTCCTCTCATGAAAGA +
Preference number: 4 (lower is better)
Translates to: WGNLPKKLLYSAISCSFLRARGS*HSSHER
Trigger: TCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACG...GAGAAAAGAACAGGAGATGGCTGAGTAGAGTAGTTTCTTTGGAAGATTCCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR GCA 90 bp CGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTCAGTTCCAGAGAGGTACTGCTGAAAGAATaGTCGAGCTTCTTTATACCT +
Preference number: 4 (lower is better)
Translates to: RMSGQFADIVQGDFSSREVLLKE*SSFFIP
Trigger: AGGTATAAAGAAGCTCGAGCATTCTTTCAGCAGTAC...CTCTCTGGAACTGAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR GCA 90 bp GCGCTTCCAGTCCCACGTCTTTACAGGAATCTTCCAGGTCTTACCATAGTTGGCGTACTGCTGAAAGAATaGTCGAGCTTCTTTATACCT +
Preference number: 4 (lower is better)
Translates to: ALPVPRLYRNLPGLTIVGVLLKE*SSFFIP
Trigger: AGGTATAAAGAAGCTCGAGCATTCTTTCAGCAGTAC...GCCAACTATGGTAAGACCTGGAAGATTCCTGTAAAGACGTGGGACTGGAAGCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675736.1
CDS-3UTR GCA 90 bp CGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACAGTTTTCGCTGCTAGTTaGAGTAATTCCTTTGCACTC +
Preference number: 4 (lower is better)
Translates to: RGFHRVHGPSCLQTQSSTVFAAS*SNSFAL
Trigger: GAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAAC...TGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000674563.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTCAGTTCCAGAGAGTTTTCGCTGCTAGTTaGAGTAATTCCTTTGCACTC +
Preference number: 4 (lower is better)
Translates to: SHEWPVCRYSAGGFQFQRVFAAS*SNSFAL
Trigger: GAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAAC...TCTCTGGAACTGAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR GCA 90 bp GTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACCTAGACAAGTTCCACTaGTCAGCCAGAATGGTACTC +
Preference number: 4 (lower is better)
Translates to: VGFNVFEGFTGYMDLHVYLDKFH*SARMVL
Trigger: GAGTACCATTCTGGCTGAGCAGTGGAACTTGTCTAG...GTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000674563.1
ENST00000675736.1
CDS-3UTR GCA 90 bp AGGAATTATAATACAAGTGCAAGGGTGGAGGAGAGGGCAGCCCAGACAAATACACTGTTTTGGCCTGAGTaGCTCCATTCCACATGTGAT +
Preference number: 4 (lower is better)
Translates to: RNYNTSARVEERAAQTNTLFWPE*LHSTCD
Trigger: ATCACATGTGGAATGGAGGCACTCAGGCCAAAACAG...TGTATTTGTCTGGGCTGCCCTCTCCTCCACCCTTGCACTTGTATTATAATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR GCA 90 bp CGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGTGCCTGTTTTGGCCTGAGTaGCTCCATTCCACATGTGAT +
Preference number: 4 (lower is better)
Translates to: RKGTNFLSMCSLSLKWPCLFWPE*LHSTCD
Trigger: ATCACATGTGGAATGGAGGCACTCAGGCCAAAACAG...GCACGGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCCCTTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR GCA 90 bp CTAGCCCAGGTCTTAATGATAGTGGAAGACAAGGAGGAAAGAGGGAACGTTGCTACATACCAGCTTAAATaGCCAGAAGAGGAGTGGGTT +
Preference number: 4 (lower is better)
Translates to: LAQVLMIVEDKEERGNVATYQLK*PEEEWV
Trigger: AACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGT...AGCAACGTTCCCTCTTTCCTCCTTGTCTTCCACTATCATTAAGACCTGGGCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp ATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACATACCAGCTTAAATaGCCAGAAGAGGAGTGGGTT +
Preference number: 4 (lower is better)
Translates to: IRGFHRVHGPSCLQTQSSTYQLK*PEEEWV
Trigger: AACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGT...GCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCAACATACCAGCTTAAATaGCCAGAAGAGGAGTGGGTT +
Preference number: 4 (lower is better)
Translates to: FEGFTGYMDLHVYKLSPATYQLK*PEEEWV
Trigger: AACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGT...TGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp GGGTTAGAAGGTGCCAGGGGGTATTCTAGGGTAGAAGTTTTGATAGTACGGAAGAGAAGTCTGAGTTCTTaGCCCATCGACATTCAACAG +
Preference number: 4 (lower is better)
Translates to: GLEGARGYSRVEVLIVRKRSLSS*PIDIQQ
Trigger: CTGTTGAATGTCGATGGGGCAAGAACTCAGACTTCT...CTTCCGTACTATCAAAACTTCTACCCTAGAATACCCCCTGGCACCTTCTAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR GCA 90 bp ACTTCCCCAGGTAAGCCAGGTAAACTAAACCTGAAAGTGGTCAGATTAGGAGAACCAGATATCAGTAGCTaGAGCAGAGGAGAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: TSPGKPGKLNLKVVRLGEPDISS*SRGEKD
Trigger: GTCCTTCTCTCCTCTGCTGCAGCTACTGATATCTGG...TTCTCCTAATCTGACCACTTTCAGGTTTAGTTTACCTGGCTTACCTGGGGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp GGGATGGGTAAGATCTCCTGGCAAAGAATGGGAGTCCCAATTGGAAATGGGGAGTCCTGCCTATCTATGTaGCATTTGAAGTACTGTAGT +
Preference number: 4 (lower is better)
Translates to: GMGKISWQRMGVPIGNGESCLSM*HLKYCS
Trigger: ACTACAGTACTTCAAATGGCACATAGATAGGCAGGA...CTCCCCATTTCCAATTGGGACTCCCATTCTTTGCCAGGAGATCTTACCCATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TTTAAGTCTCAAGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACCACCCTGCTGATTCTTaGCTAGTTGAGATAGAAACA +
Preference number: 4 (lower is better)
Translates to: FKSQVAVPEVVATPLMKDHPADS*LVEIET
Trigger: TGTTTCTATCTCAACTAGGCAAGAATCAGCAGGGTG...GTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCCACTTGAGACTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602526.1
CDS-3UTR GCA 90 bp AGGAGCTTGTTAATGGGTCCCTACAAAATCTCTGTATTAGGTTGGGTTAGAAGGACAGGTGTGAGCCACTaGACCCAAAAGAAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: RSLLMGPYKISVLGWVRRTGVSH*TQKKQG
Trigger: TCCCTGCTTCTTTTGGGTGCAGTGGCTCACACCTGT...CCTTCTAACCCAACCTAATACAGAGATTTTGTAGGGACCCATTAACAAGCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000642952.1
ENST00000644273.1
ENST00000675695.1
CDS-3UTR GCA 90 bp AACTCAGTCCAGCACAGTGTAAACTTCGGAAACAGGTATCTGTCTTATCCTATCACAGGTGTGAGCCACTaGACCCAAAAGAAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: NSVQHSVNFGNRYLSYPITGVSH*TQKKQG
Trigger: TCCCTGCTTCTTTTGGGTGCAGTGGCTCACACCTGT...GATAGGATAAGACAGATACCTGTTTCCGAAGTTTACACTGTGCTGGACTGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644273.1
CDS-3UTR GCA 90 bp CCACGTCTTTACAGGAATCTTCCAGGTCTTACCATAGTTGGCTTCAATGTATTCGCTCACTGCAGACTCTaGTTCCCGGGTTCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: PRLYRNLPGLTIVGFNVFAHCRL*FPGSSD
Trigger: ATCACTTGAACCCGGGAAGCAGAGTCTGCAGTGAGC...GAATACATTGAAGCCAACTATGGTAAGACCTGGAAGATTCCTGTAAAGACGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675695.1
CDS-3UTR GCA 90 bp AATGTGTTCTTTAAGTCTCAAGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATTCATGAGGCTGGCTaGATAAATTTCACAGCTCCA +
Preference number: 4 (lower is better)
Translates to: NVFFKSQVAVPEVVATPLIHEAG*INFTAP
Trigger: TGGAGCTGTGAAATTTATGCAGCCAGCCTCATGAAT...GAGAGGAGTGGCAACTACCTCTGGCACGGCCACTTGAGACTTAAAGAACACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR GCA 90 bp ACCGAACTAGGCTGTGGAGGGCTCTGGATTCCAGTCGACAAATCCAAAACCCTTTACAGATACATCATTTaGAGCATCACACCATGCTCT +
Preference number: 4 (lower is better)
Translates to: TELGCGGLWIPVDKSKTLYRYII*SITPCS
Trigger: AGAGCATGGTGTGATGCTGCAAATGATGTATCTGTA...AAGGGTTTTGGATTTGTCGACTGGAATCCAGAGCCCTCCACAGCCTAGTTCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR GCA 90 bp AGAAATAGGCCAGATTCCATTGGGTTGCACATTGGGAGGAGAGCGCTTCCAGTCCAAGAAATCAAGTCCTaGGTATTGTTCTTTCGGCAT +
Preference number: 4 (lower is better)
Translates to: RNRPDSIGLHIGRRALPVQEIKS*VLFFRH
Trigger: ATGCCGAAAGAACAATACGCAGGACTTGATTTCTTG...GACTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATGGAATCTGGCCTATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS-3UTR GCA 90 bp TCATCAACTTGGACTGACAAACCCAGGGACACTTCCTCCTCACAAACCGTCCTTAGGGTTTCACACGTGTaGATAAAGACATATGGACAG +
Preference number: 4 (lower is better)
Translates to: SSTWTDKPRDTSSSQTVLRVSHV*IKTYGQ
Trigger: CTGTCCATATGTCTTTATGCACACGTGTGAAACCCT...AAGGACGGTTTGTGAGGAGGAAGTGTCCCTGGGTTTGTCAGTCCAAGTTGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR CCA 90 bp TCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTCAGTTCCAGAGACAATTCGGCTTCCTTTaGATTTTGACAAACCAGCTC +
Preference number: 4 (lower is better)
Translates to: SHEWPVCRYSAGGFQFQRQFGFL*ILTNQL
Trigger: GAGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTG...TCTCTGGAACTGAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CCA 90 bp TTTGCACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTGCAGTGGATCGCATGAGTaGCCAGTTTGCAGATATAGT +
Preference number: 4 (lower is better)
Translates to: FALFRKATASTVLSSRYCSGSHE*PVCRYS
Trigger: ACTATATCTGCAAACTGGCCACTCATGCGATCCACT...GCAGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR CCA 90 bp GTTCCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTGTGCATTGGATCCTTTaGAATGAGAACTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: VPESESIPSSRGSLLSIFVHWIL*NENFQS
Trigger: GGACTGGAAGTTCTCATTCCAAAGGATCCAATGCAC...AAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CCA 90 bp CCTTTGCACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTGTGCATTGGATCCTTTaGAATGAGAACTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: PLHSSERPQLPQCYHQGTVHWIL*NENFQS
Trigger: GGACTGGAAGTTCTCATTCCAAAGGATCCAATGCAC...AGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTGCAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR CCA 90 bp GTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATTTCTACAAAGTGCATTaGATCCTTTGGAATGAGAAC +
Preference number: 4 (lower is better)
Translates to: VAVPEVVATPLMKDYQVDFYKVH*ILWNEN
Trigger: GTTCTCATTCCAAAGGATCCAATGCACTTTGTAGAA...ATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CCA 90 bp AGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATTCTACAAAGTGCATTaGATCCTTTGGAATGAGAAC +
Preference number: 4 (lower is better)
Translates to: SGRARGSCHSSHERLPSGFYKVH*ILWNEN
Trigger: GTTCTCATTCCAAAGGATCCAATGCACTTTGTAGAA...TCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CCA 90 bp TGCAGGGGGATTTCAGTTCCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTAATAAACCTAGAGTGTaGTACTTCTTCTACAAAGTG +
Preference number: 4 (lower is better)
Translates to: CRGISVPESESIPSSRGSNKPRV*YFFYKV
Trigger: CACTTTGTAGAAGAAGTACCACACTCTAGGTTTATT...AGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAACTGAAATCCCCCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CCA 90 bp GCAGGGGGATTTCAGTTCCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTAATAAACCTAGAGTGTaGTACTTCTTCTACAAAGTG +
Preference number: 4 (lower is better)
Translates to: AGGFQFQRVSLSRLAGDLNKPRV*YFFYKV
Trigger: CACTTTGTAGAAGAAGTACCACACTCTAGGTTTATT...AAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAACTGAAATCCCCCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CCA 90 bp CAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTCAGTACATCATCTTTTCCCTaGAAGGATAGTTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: QVDRMSGQFADIVQGDFSTSSFP*KDSSKL
Trigger: CAGCTTGGAACTATCCTTCCAGGGAAAAGATGATGT...ACTGAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR CCA 90 bp TCATCAACTTGGACTGACAAACCCAGGGACACTTCCTCCTCACAAACCGTCCTTACATCATCTTTTCCCTaGAAGGATAGTTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: SSTWTDKPRDTSSSQTVLTSSFP*KDSSKL
Trigger: CAGCTTGGAACTATCCTTCCAGGGAAAAGATGATGT...AAGGACGGTTTGTGAGGAGGAAGTGTCCCTGGGTTTGTCAGTCCAAGTTGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR CCA 90 bp CTGTCAAATAGGATCTGTGTGCGAGTGGACAAGGACTCAGAGAAAGGACAAGGGACATCATCTTTTCCCTaGAAGGATAGTTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: LSNRICVRVDKDSEKGQGTSSFP*KDSSKL
Trigger: CAGCTTGGAACTATCCTTCCAGGGAAAAGATGATGT...CCCTTGTCCTTTCTCTGAGTCCTTGTCCACTCGCACACAGATCCTATTTGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR CCA 90 bp TCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACGTTTCACAGGGTACATaGACCTTCATGTCTACAAAC +
Preference number: 4 (lower is better)
Translates to: SRVSQGTWTFMSTNSVQHVSQGT*TFMSTN
Trigger: GTTTGTAGACATGAAGGTCCATGTACCCTGTGAAAC...GTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000644273.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp CTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTGTTTCACAGGGTACATaGACCTTCATGTCTACAAAC +
Preference number: 4 (lower is better)
Translates to: LPSGSHEWPVCRYSAGGFVSQGT*TFMSTN
Trigger: GTTTGTAGACATGAAGGTCCATGTACCCTGTGAAAC...AAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
CDS-3UTR CCA 90 bp ATGGACCTAGGGAATAGCCCTATCCAGGCCCTGGAAAAGGGTTCATGGTCATTTGTTTCACAGGGTACATaGACCTTCATGTCTACAAAC +
Preference number: 4 (lower is better)
Translates to: MDLGNSPIQALEKGSWSFVSQGT*TFMSTN
Trigger: GTTTGTAGACATGAAGGTCCATGTACCCTGTGAAAC...AAATGACCATGAACCCTTTTCCAGGGCCTGGATAGGGCTATTCCCTAGGTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR CCA 90 bp AGGAGCTTGTTAATGGGTCCCTACAAAATCTCTGTATTAGGTTGGGTTAGAAGGGAACTCTTCAAAGGGTaGGGGAGGGTTCCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: RSLLMGPYKISVLGWVRRELFKG*GRVPSK
Trigger: CTTTGAGGGAACCCTCCCCCACCCTTTGAAGAGTTC...CCTTCTAACCCAACCTAATACAGAGATTTTGTAGGGACCCATTAACAAGCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000675695.1
CDS-3UTR CCA 90 bp TCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACAGAACCTGTGTCAATTaGGCCAAGATGTCTTGGATT +
Preference number: 4 (lower is better)
Translates to: SRVSQGTWTFMSTNSVQHRTCVN*AKMSWI
Trigger: AATCCAAGACATCTTGGCCCAATTGACACAGGTTCT...GTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTCAGAACCTGTGTCAATTaGGCCAAGATGTCTTGGATT +
Preference number: 4 (lower is better)
Translates to: YQVDRMSGQFADIVQGDFRTCVN*AKMSWI
Trigger: AATCCAAGACATCTTGGCCCAATTGACACAGGTTCT...GAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATACTACCTGGTTGTCCTaGTTATCAATTAAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: VAVPEVVATPLMKDYQVDTTWLS*LSIKRN
Trigger: ATTCCTCTTAATTGATAACCAGGACAACCAGGTAGT...ATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR CCA 90 bp AGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGAACTACCTGGTTGTCCTaGTTATCAATTAAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: SGRARGSCHSSHERLPSGTTWLS*LSIKRN
Trigger: ATTCCTCTTAATTGATAACCAGGACAACCAGGTAGT...TCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TGTCCCACCAAGCAGCTACTCTTAGGGATGCTCAATTTTAGGAACTATGGTTTTCTGCTTAGAGAGGACTaGGTGACTACCTGGTTGTCC +
Preference number: 4 (lower is better)
Translates to: CPTKQLLLGMLNFRNYGFLLRED*VTTWLS
Trigger: GGACAACCAGGTAGTCACCCAGTCCTCTCTAAGCAG...AAAACCATAGTTCCTAAAATTGAGCATCCCTAAGAGTAGCTGCTTGGTGGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp AGGTCTTACCATAGTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGAGAGTCACGGCAGTCTTaGGTTTTAGCCTCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: RSYHSWLQCIRGFHRVHGESRQS*VLASAV
Trigger: AACAGCTGAGGCTAAAACCCAAGACTGCCGTGACTC...TCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCAACTATGGTAAGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GCGCTTCCAGTCCCACGTCTTTACAGGAATCTTCCAGGTCTTACCATAGTTGGCAACTGTCTTATTGTCTaGAGAGAAGGCATTTTCCAG +
Preference number: 4 (lower is better)
Translates to: ALPVPRLYRNLPGLTIVGNCLIV*REGIFQ
Trigger: CTGGAAAATGCCTTCTCTCCAGACAATAAGACAGTT...GCCAACTATGGTAAGACCTGGAAGATTCCTGTAAAGACGTGGGACTGGAAGCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp CAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTAGGCTTACCTGTTAGAAGGTaGGAATGTGGCACTTTCTTG +
Preference number: 4 (lower is better)
Translates to: QRVSLSRLAGDLYSQSLGLPVRR*ECGTFL
Trigger: CAAGAAAGTGCCACATTCCCACCTTCTAACAGGTAA...GCCTAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACAGTGTAATCTCTGTATTAGGTTaGGTTAGAAGGTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: VSQGTWTFMSTNSVQHSVISVLG*VRRCQG
Trigger: CCCCTGGCACCTTCTAACCCAACCTAATACAGAGAT...TACACTGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642952.1
ENST00000644273.1
ENST00000675695.1
CDS-3UTR CCA 90 bp GAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTAGGCACCTTCCTTTCCATAGTTaGCTTCAATGTATTCGAGGG +
Preference number: 4 (lower is better)
Translates to: ESESIPSSRGSLLSIFRHLPFHS*LQCIRG
Trigger: CCCTCGAATACATTGAAGCCAACTATGGAAAGGAAG...GTGCCTAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642537.1
ENST00000645933.1
CDS-3UTR CCA 90 bp CGACCAAACTGTAACTTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAGTAGTCCCAGCTACTTaGGGGTCTGAGCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: RPNCNFRKGTNFLSMCSLVVPAT*GSEPGG
Trigger: TCCTCCTGGCTCAGACCCCCAAGTAGCTGGGACTAC...TAAAGAACACATTGACAGGAAATTTGTTCCCTTCCGAAAGTTACAGTTTGGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675443.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TTTTTCTGTGAAGGGCCTTGTGAAAATGATGCGAACTCCCAGCCCACATGGACCAGGGGAAACAATCTTTaGCGCATCATTTCACTAGCA +
Preference number: 4 (lower is better)
Translates to: FFCEGPCENDANSQPTWTRGNNL*RIISLA
Trigger: TGCTAGTGAAATGATGCGCCAAAGATTGTTTCCCCT...GGTCCATGTGGGCTGGGAGTTCGCATCATTTTCACAAGGCCCTTCACAGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR CCA 90 bp AGGAATTATAATACAAGTGCAAGGGTGGAGGAGAGGGCAGCCCAGACAAATACAAAGTCACTGAGACTTTaGGGTTGTTTGTCACACCGC +
Preference number: 4 (lower is better)
Translates to: RNYNTSARVEERAAQTNTKSLRL*GCLSHR
Trigger: GCGGTGTGACAAACAACCCCAAAGTCTCAGTGACTT...TGTATTTGTCTGGGCTGCCCTCTCCTCCACCCTTGCACTTGTATTATAATTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676310.1
3UTR CAA 72 bp AGGAGAGGGCAGCCCAGACAAATACAACTGTGTGCTTaGAACATGGGAATAGTATGTTTAGTCACAGGTCGC +
Preference number: 4 (lower is better)
Translates to: RRGQPRQIQLCA*NMGIVCLVTGR
Trigger: GCGACCTGTGACTAAACATACTATTCCCATGTTCAAAGCACACAGTTGTATTTGTCTGGGCTGCCCTCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR TCA 90 bp ATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCGCTTCCTTTGGATTTTaGCAAACCAGCTCCATTCTT +
Preference number: 4 (lower is better)
Translates to: IRGFHRVHGPSCLQTQSSASFGF*QTSSIL
Trigger: AAGAATGGAGCTGGTTTGTCAAAATCCAAAGGAAGC...GCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTAGGCACTGAAGCTTCCTTTGGATTTTaGCAAACCAGCTCCATTCTT +
Preference number: 4 (lower is better)
Translates to: VSLSRLAGDLYSQSLGTEASFGF*QTSSIL
Trigger: AAGAATGGAGCTGGTTTGTCAAAATCCAAAGGAAGC...TTCAGTGCCTAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR TCA 90 bp TTTCAGTTCCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAAGCTTCCTTTGGATTTTaGCAAACCAGCTCCATTCTT +
Preference number: 4 (lower is better)
Translates to: FQFQRVSLSRLAGDLYSQASFGF*QTSSIL
Trigger: AAGAATGGAGCTGGTTTGTCAAAATCCAAAGGAAGC...TTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAACTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR TCA 90 bp TTTCAGTTCCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCATTCTTCCATAGGTaGTACTGCAGTGCAAATGCA +
Preference number: 4 (lower is better)
Translates to: FQFQRVSLSRLAGDLYSQSFFHR*YCSANA
Trigger: TGCATTTGCACTGCAGTATCACCTATGGAAGAATGA...TTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAACTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR TCA 90 bp CAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTAGGCTCAATCTTTAGGCACTaGAATCCCATATTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: QRVSLSRLAGDLYSQSLGSIFRH*NPIFSA
Trigger: AGCTGAGAATATGGGATTTCAGTGCCTAAAGATTGA...GCCTAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR TCA 90 bp TCATCAACTTGGACTGACAAACCCAGGGACACTTCCTCCTCACAAACCGTCCTTTCAATCTTTAGGCACTaGAATCCCATATTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SSTWTDKPRDTSSSQTVLSIFRH*NPIFSA
Trigger: AGCTGAGAATATGGGATTTCAGTGCCTAAAGATTGA...AAGGACGGTTTGTGAGGAGGAAGTGTCCCTGGGTTTGTCAGTCCAAGTTGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR TCA 90 bp GTCAATGTGTTCTTTAAGTCTCAAGTGGCCGTGCCAGAGGTAGTTGCCACTCCTTCAATCTTTAGGCACTaGAATCCCATATTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: VNVFFKSQVAVPEVVATPSIFRH*NPIFSA
Trigger: AGCTGAGAATATGGGATTTCAGTGCCTAAAGATTGA...AGGAGTGGCAACTACCTCTGGCACGGCCACTTGAGACTTAAAGAACACATTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR TCA 90 bp CTTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCACCAAGTGGATCGCATaGGTGGCCAGTTTGCAGATA +
Preference number: 4 (lower is better)
Translates to: LSEGNKFPVNVFFKSQVATKWIA*VASLQI
Trigger: TATCTGCAAACTGGCCACTCATGCGATCCACTTGGT...GGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCCCTTCCGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR TCA 90 bp CTCCTGGATAACGACCAAACTGTAACTTTCGGAAGGGAACAAATTTCCTGTCAAACCAAGTGGATCGCATaGGTGGCCAGTTTGCAGATA +
Preference number: 4 (lower is better)
Translates to: LLDNDQTVTFGREQISCQTKWIA*VASLQI
Trigger: TATCTGCAAACTGGCCACTCATGCGATCCACTTGGT...TTGACAGGAAATTTGTTCCCTTCCGAAAGTTACAGTTTGGTCGTTATCCAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR TCA 90 bp GTCCTGAATGCGAGAGAGTGTGAAATTAGAGTTAGGGACAGAAAGGTAGAAGATACCAAGTGGATCGCATaGGTGGCCAGTTTGCAGATA +
Preference number: 4 (lower is better)
Translates to: VLNARECEIRVRDRKVEDTKWIA*VASLQI
Trigger: TATCTGCAAACTGGCCACTCATGCGATCCACTTGGT...ATCTTCTACCTTTCTGTCCCTAACTCTAATTTCACACTCTCTCGCATTCAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR TCA 90 bp CCAGTCGACAAATCCAAAACCCTTGCTGATCCCATAAAACCCTATAGATCTGCATTGCCACTCCTCTCATaGAAGACTACCAAGTGGATC +
Preference number: 4 (lower is better)
Translates to: PVDKSKTLADPIKPYRSALPLLS*KTTKWI
Trigger: GATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAA...TGCAGATCTATAGGGTTTTATGGGATCAGCAAGGGTTTTGGATTTGTCGACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR TCA 90 bp CTCTCAGGATGTCTCTGGAGACATTCATGGGTGCCTAACTACCAACAAGTTGTCTTGGATCCTTTGGAATaGGAACTTCCAGTCCATCAA +
Preference number: 4 (lower is better)
Translates to: LSGCLWRHSWVPNYQQVVLDPLE*ELPVHQ
Trigger: TTGATGGACTGGAAGTTCTCATTCCAAAGGATCCAA...GACAACTTGTTGGTAGTTAGGCACCCATGAATGTCTCCAGAGACATCCTGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp TTGCACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTGCTTTGGATCCTTTGGAATaGGAACTTCCAGTCCATCAA +
Preference number: 4 (lower is better)
Translates to: LHSSERPQLPQCYHQGTALDPLE*ELPVHQ
Trigger: TTGATGGACTGGAAGTTCTCATTCCAAAGGATCCAA...AGCAGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR TCA 90 bp GTTTTCGCTGCTAGTTGCAGTAATTCCTTTGCACTCTTCCGAAAGGCCACAGCTTTGGATCCTTTGGAATaGGAACTTCCAGTCCATCAA +
Preference number: 4 (lower is better)
Translates to: VFAASCSNSFALFRKATALDPLE*ELPVHQ
Trigger: TTGATGGACTGGAAGTTCTCATTCCAAAGGATCCAA...AGCTGTGGCCTTTCGGAAGAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR TCA 90 bp GTAACTCTGGCCTGTCAAAAGCTCCTGGATAACGACCAAACTGTAACTTTCGGATCATCAAGGTACTGCTaGAAGAATGCTCGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: VTLACQKLLDNDQTVTFGSSRYC*KNARAS
Trigger: AGAAGCTCGAGCATTCTTTCAGCAGTACCTTGATGA...TCCGAAAGTTACAGTTTGGTCGTTATCCAGGAGCTTTTGACAGGCCAGAGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR TCA 90 bp ATGAAAGACTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGTCATCAAGGTACTGCTaGAAGAATGCTCGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: MKDYQVDRMSGQFADIVQSSRYC*KNARAS
Trigger: AGAAGCTCGAGCATTCTTTCAGCAGTACCTTGATGA...CTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTCTTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR TCA 90 bp AATTCCTTTGCACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTCATCAAGGTACTGCTaGAAGAATGCTCGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: NSFALFRKATASTVLSSRSSRYC*KNARAS
Trigger: AGAAGCTCGAGCATTCTTTCAGCAGTACCTTGATGA...CCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTGCAAAGGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR TCA 90 bp CCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGCTCTCCCAAATTTGTGTTTaGGCGGAAGTCCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: PFLRLLLFSGVRGKSAKLSQICV*AEVLHP
Trigger: AGGATGCAGGACTTCCGCTCAAACACAAATTTGGGA...GAGCTTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675736.1
CDS-3UTR TCA 90 bp AGCTTGTGGTCTTTTTATGGCAACACATTGCCTTCCCTGAGTGAGATGTTAGAGCTTAGCTTTGCCTGGTaGGCTCATCTTCCAGTTCAA +
Preference number: 4 (lower is better)
Translates to: SLWSFYGNTLPSLSEMLELSFAW*AHLPVQ
Trigger: TTGAACTGGAAGATGAGCTCACCAGGCAAAGCTAAG...CTCTAACATCTCACTCAGGGAAGGCAATGTGTTGCCATAAAAAGACCACAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CTGATGTCTCCAGATGTGAACTGTCTTATTGTCTGGAGAGAAGGCATTTTCCAGCTTAGCTTTGCCTGGTaGGCTCATCTTCCAGTTCAA +
Preference number: 4 (lower is better)
Translates to: LMSPDVNCLIVWREGIFQLSFAW*AHLPVQ
Trigger: TTGAACTGGAAGATGAGCTCACCAGGCAAAGCTAAG...CTGGAAAATGCCTTCTCTCCAGACAATAAGACAGTTCACATCTGGAGACATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTCAGTTCCAGCAAAGTCTGATCACTTaGATATTAACTCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: GSHEWPVCRYSAGGFQFQQSLIT*ILTQTP
Trigger: TGGAGTCTGAGTTAATATTCAAGTGATCAGACTTTG...CTGGAACTGAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
CDS-3UTR TCA 90 bp GAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATCGCATGAGTGGCCAAAGTCTGATCACTTaGATATTAACTCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: EVVATPLMKDYQVDRMSGQSLIT*ILTQTP
Trigger: TGGAGTCTGAGTTAATATTCAAGTGATCAGACTTTG...GCCACTCATGCGATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
CDS-3UTR TCA 90 bp CGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACAATGGTCTCACTTGAATaGTTTGTCAACAAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: RGFHRVHGPSCLQTQSSTMVSLE*FVNKCH
Trigger: ATGGCACTTGTTGACAAATCATTCAAGTGAGACCAT...TGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp ATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCGGTAAAGTAGAAGTCTaGGTTCTTGCCCCATCGACA +
Preference number: 4 (lower is better)
Translates to: MYSRVSQGTWTFMSTNSVGKVEV*VLAPST
Trigger: TGTCGATGGGGCAAGAACTCAGACTTCTACTTTACC...GACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GACTCCACAATCTTAAAAGTAGCACTAACATACCAGCTTAAATGCCCAGAAGAGTTAGGGTGGAACCCATaGGCTGAAGCCTGTGAAACC +
Preference number: 4 (lower is better)
Translates to: DSTILKVALTYQLKCPEELGWNP*AEACET
Trigger: GGTTTCACAGGCTTCAGCTCATGGGTTCCACCCTAA...CTCTTCTGGGCATTTAAGCTGGTATGTTAGTGCTACTTTTAAGATTGTGGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp ATCTTAAAAGTAGCACTAACATACCAGCTTAAATGCCCAGAAGAGGAGTGGGTTTTAGAGAGGACTGGGTaGCTACCTGGTTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: ILKVALTYQLKCPEEEWVLERTG*LPGCPG
Trigger: ACCAGGACAACCAGGTAGTCACCCAGTCCTCTCTAA...AACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGTTAGTGCTACTTTTAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GACTCCACAATCTTAAAAGTAGCACTAACATACCAGCTTAAATGCCCAGAAGAGGCGGCAGAAACACCCTaGGACTTAGCCTCAATGAAG +
Preference number: 4 (lower is better)
Translates to: DSTILKVALTYQLKCPEEAAETP*DLASMK
Trigger: CTTCATTGAGGCTAAGTCTCAGGGTGTTTCTGCCGC...CTCTTCTGGGCATTTAAGCTGGTATGTTAGTGCTACTTTTAAGATTGTGGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GCCTGGCCTTCAGATTCTAGAGAAGGCTTTTGTTTCCCCAAGTTAGGGTGGAACAGCCATAAGTTTGGGTaGGATTTTAGACTGAAGTGT +
Preference number: 4 (lower is better)
Translates to: AWPSDSREGFCFPKLGWNSHKFG*DFRLKC
Trigger: ACACTTCAGTCTAAAATCTCACCCAAACTTATGGCT...GTTCCACCCTAACTTGGGGAAACAAAAGCCTTCTCTAGAATCTGAAGGCCAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGTGCCAGAGGATTGCCTTCCCTGAGTaGGATGTTAGAGGTGATCTA +
Preference number: 4 (lower is better)
Translates to: GTNFLSMCSLSLKWPCQRIAFPE*DVRGDL
Trigger: TAGATCACCTCTAACATCTCACTCAGGGAAGGCAAT...CCTCTGGCACGGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GGGTTAGAAGGTGCCAGGGGGTATTCTAGGGTAGAAGTTTTGATAGTACGGAAGGAAAGGCTAGAATATTaGAAAAGAAGTCCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: GLEGARGYSRVEVLIVRKERLEY*KRSPGE
Trigger: CTCCCCTGGACTTCTTTTTCAATATTCTAGCCTTTC...CTTCCGTACTATCAAAACTTCTACCCTAGAATACCCCCTGGCACCTTCTAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR TCA 90 bp TTTGCACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTGCGAAAGGCTAGAATATTaGAAAAGAAGTCCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: FALFRKATASTVLSSRYCERLEY*KRSPGE
Trigger: CTCCCCTGGACTTCTTTTTCAATATTCTAGCCTTTC...GCAGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACAGATTTCAGTCTGATGTaGAGCAGCTTAAAATGGCAT +
Preference number: 4 (lower is better)
Translates to: RGFHRVHGPSCLQTQSSTDFSLM*SSLKWH
Trigger: ATGCCATTTTAAGCTGCTTCACATCAGACTGAAATC...TGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000642952.1
ENST00000644273.1
ENST00000675695.1
CDS-3UTR TCA 90 bp TGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCCTCTATCGCCCAGGCTaGAGTGCAATGCCGCGATCT +
Preference number: 4 (lower is better)
Translates to: CKLLSLICFRKSLPAHSLLYRPG*SAMPRS
Trigger: AGATCGCGGCATTGCACTTCAGCCTGGGCGATAGAG...GAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR TCA 90 bp GGGTTAGAAGGTGCCAGGGGGTATTCTAGGGTAGAAGTTTTGATAGTACGGAAGCTATTCCCCATGCTTTaGATGAATCATCAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: GLEGARGYSRVEVLIVRKLFPML*MNHQKA
Trigger: AGCCTTCTGATGATTCATTCAAAGCATGGGGAATAG...CTTCCGTACTATCAAAACTTCTACCCTAGAATACCCCCTGGCACCTTCTAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000675695.1
CDS-3UTR TCA 90 bp TTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTCCATTCGCCTGGGTGACAAAGTaGGACCCTCATTCTTCCATA +
Preference number: 4 (lower is better)
Translates to: LFSKKSTSPFPQTFRFPFAWVTK*DPHSSI
Trigger: TATGGAAGAATGAGGGTCTCACTTTGTCACCCAGGC...GAATGGAAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR TCA 90 bp ATAATAGAGATGACAACCACAGCAAACTCCCTTAGGACAGGAAGAGCGGTCAAGTGGTTGTCTCTAACCTaGAAGAATGCTCGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: IIEMTTTANSLRTGRAVKWLSLT*KNARAS
Trigger: AGAAGCTCGAGCATTCTTTCAGGTTAGAGACAACCA...CTTGACCGCTCTTCCTGTCCTAAGGGAGTTTGCTGTGGTTGTCATCTCTATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR TCA 90 bp CAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTAGGCTGGGTCTTGGGCACTTaGCAGTTATATACTTCATTT +
Preference number: 4 (lower is better)
Translates to: QRVSLSRLAGDLYSQSLGWVLGT*QLYTSF
Trigger: AAATGAAGTATATAACTGTCAAGTGCCCAAGACCCA...GCCTAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR TCA 90 bp GTTCCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTTTCACAGCTCCACAATaGCTTAAGGAAATAGGGCTA +
Preference number: 4 (lower is better)
Translates to: VPESESIPSSRGSLLSIFFTAPQ*LKEIGL
Trigger: TAGCCCTATTTCCTTAAGTCATTGTGGAGCTGTGAA...AAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR TCA 90 bp TTCCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTAGAAACTGTCCCAGACTaGAGAAGACTAAAGAGACAG +
Preference number: 4 (lower is better)
Translates to: FQRVSLSRLAGDLYSQSLETVPD*RRLKRQ
Trigger: CTGTCTCTTTAGTCTTCTTCAGTCTGGGACAGTTTC...TAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675232.1
ENST00000676192.1
CDS-3UTR TCA 90 bp TACAGTACTGACAGTAGCTACTACTTACACAATACTTACAATGTGCCAGGTACTGCACCCAGGACCTCCTaGCACACCTCAAAGCTCTTT +
Preference number: 4 (lower is better)
Translates to: YSTDSSYYLHNTYNVPGTAPRTS*HTSKLF
Trigger: AAAGAGCTTTGAGGTGTGTCAGGAGGTCCTGGGTGC...AGTACCTGGCACATTGTAAGTATTGTGTAAGTAGTAGCTACTGTCAGTACTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR TCA 90 bp GGCATATGGCTGGGGGAATCTTCCAAAGAAACTACTCTACTCAGCCATCTCCTGCCCACAGGGATAGTATaGGGATTAACCAGATTATAT +
Preference number: 4 (lower is better)
Translates to: GIWLGESSKETTLLSHLLPTGIV*GLTRLY
Trigger: ATATAATCTGGTTAATCCTCATACTATCCCTGTGGG...CAGGAGATGGCTGAGTAGAGTAGTTTCTTTGGAAGATTCCCCCAGCCATATGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR GCA 90 bp GGGAGTCCCAATTGGAAATGGGGAGAAATGTGGAGTGTATGCATTTCTAAATACCTGCACGCCACTGTGTaGTATCAAATCCAATTCGGC +
Preference number: 4 (lower is better)
Translates to: GSPNWKWGEMWSVCISKYLHATV*YQIQFG
Trigger: GCCGAATTGGATTTGATAGCACACAGTGGCGTGCAG...GTATTTAGAAATGCATACACTCCACATTTCTCCCCATTTCCAATTGGGACTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp AAAGACTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGATACTGCAGTGCAAATaGAGTAAAGTCTCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: KDYQVDRMSGQFADIVQGILQCK*SKVSWN
Trigger: GTTCCAAGAGACTTTACTGCATTTGCACTGCAGTAT...CCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR GCA 90 bp CCTCAGACATTCAGGTTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGACGTGCCAGAGGTAGTTaGCACTCCTCTCATGAAAGA +
Preference number: 4 (lower is better)
Translates to: PQTFRFPFLRLLLFSGVRRARGS*HSSHER
Trigger: TCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACG...TCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAACCTGAATGTCTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGCGTGCCAGAGGTAGTTaGCACTCCTCTCATGAAAGA +
Preference number: 4 (lower is better)
Translates to: FRKGTNFLSMCSLSLKWPRARGS*HSSHER
Trigger: TCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACG...CGGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCCCTTCCGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR GCA 90 bp GACTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATACTTCTTCTACAAAGTaGATTGGATCCTTTGGAATG +
Preference number: 4 (lower is better)
Translates to: DYQVDRMSGQFADIVQGDTSSTK*IGSFGM
Trigger: CATTCCAAAGGATCCAATGCACTTTGTAGAAGAAGT...ATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR GCA 90 bp TCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACGTACTGCTGAAAGAATaGTCGAGCTTCTTTATACCT +
Preference number: 4 (lower is better)
Translates to: SRVSQGTWTFMSTNSVQHVLLKE*SSFFIP
Trigger: AGGTATAAAGAAGCTCGAGCATTCTTTCAGCAGTAC...GTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000674563.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TTTTTCTGTGAAGGGCCTTGTGAAAATGATGCGAACTCCCAGCCCACATGGACCGTACTGCTGAAAGAATaGTCGAGCTTCTTTATACCT +
Preference number: 4 (lower is better)
Translates to: FFCEGPCENDANSQPTWTVLLKE*SSFFIP
Trigger: AGGTATAAAGAAGCTCGAGCATTCTTTCAGCAGTAC...GGTCCATGTGGGCTGGGAGTTCGCATCATTTTCACAAGGCCCTTCACAGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR GCA 90 bp GGGTTAGAAGGTGCCAGGGGGTATTCTAGGGTAGAAGTTTTGATAGTACGGAAGGTTTTCGCTGCTAGTTaGAGTAATTCCTTTGCACTC +
Preference number: 4 (lower is better)
Translates to: GLEGARGYSRVEVLIVRKVFAAS*SNSFAL
Trigger: GAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAAC...CTTCCGTACTATCAAAACTTCTACCCTAGAATACCCCCTGGCACCTTCTAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642952.1
CDS-3UTR GCA 90 bp GGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACAGTGTGTTTTCGCTGCTAGTTaGAGTAATTCCTTTGCACTC +
Preference number: 4 (lower is better)
Translates to: GFTGYMDLHVYKLSPAQCVFAAS*SNSFAL
Trigger: GAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAAC...ACACTGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000674563.1
ENST00000675736.1
CDS-3UTR GCA 90 bp GGAGACATTCATGGGTGCCTAACTACCAACAAGTTGTCAACTTCCCCAGGTAAGGTTTTCGCTGCTAGTTaGAGTAATTCCTTTGCACTC +
Preference number: 4 (lower is better)
Translates to: GDIHGCLTTNKLSTSPGKVFAAS*SNSFAL
Trigger: GAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAAC...CTTACCTGGGGAAGTTGACAACTTGTTGGTAGTTAGGCACCCATGAATGTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TACCATAGTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCACTAGACAAGTTCCACTaGTCAGCCAGAATGGTACTC +
Preference number: 4 (lower is better)
Translates to: YHSWLQCIRGFHRVHGPSLDKFH*SARMVL
Trigger: GAGTACCATTCTGGCTGAGCAGTGGAACTTGTCTAG...TGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCAACTATGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675736.1
CDS-3UTR GCA 90 bp GCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACCTAGACAAGTTCCACTaGTCAGCCAGAATGGTACTC +
Preference number: 4 (lower is better)
Translates to: ASMYSRVSQGTWTFMSTNLDKFH*SARMVL
Trigger: GAGTACCATTCTGGCTGAGCAGTGGAACTTGTCTAG...GTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000674563.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAACTAGACAAGTTCCACTaGTCAGCCAGAATGGTACTC +
Preference number: 4 (lower is better)
Translates to: WLQCIRGFHRVHGPSCLQLDKFH*SARMVL
Trigger: GAGTACCATTCTGGCTGAGCAGTGGAACTTGTCTAG...TTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000674563.1
ENST00000675736.1
CDS-3UTR GCA 90 bp CCATATTCTCAGCTATCCGAAACCAGCCTTCCTCATTCTTCCATAGGTGATACTCTAGACAAGTTCCACTaGTCAGCCAGAATGGTACTC +
Preference number: 4 (lower is better)
Translates to: PYSQLSETSLPHSSIGDTLDKFH*SARMVL
Trigger: GAGTACCATTCTGGCTGAGCAGTGGAACTTGTCTAG...AGTATCACCTATGGAAGAATGAGGAAGGCTGGTTTCGGATAGCTGAGAATATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000676371.1
CDS-3UTR GCA 90 bp CAGGAATCTTCCAGGTCTTACCATAGTTGGCTTCAATGTATTCGAGGGTTTCACCTGTTTTGGCCTGAGTaGCTCCATTCCACATGTGAT +
Preference number: 4 (lower is better)
Translates to: QESSRSYHSWLQCIRGFHLFWPE*LHSTCD
Trigger: ATCACATGTGGAATGGAGGCACTCAGGCCAAAACAG...GTGAAACCCTCGAATACATTGAAGCCAACTATGGTAAGACCTGGAAGATTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp ATGATAGAAAATCTGGGACTCACACCATCTGTCCAGACAGTTCTATCACTGCTCCTGTTTTGGCCTGAGTaGCTCCATTCCACATGTGAT +
Preference number: 4 (lower is better)
Translates to: MIENLGLTPSVQTVLSLLLFWPE*LHSTCD
Trigger: ATCACATGTGGAATGGAGGCACTCAGGCCAAAACAG...GAGCAGTGATAGAACTGTCTGGACAGATGGTGTGAGTCCCAGATTTTCTATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR GCA 90 bp AGGTCTTACCATAGTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACTGTTTTGGCCTGAGTaGCTCCATTCCACATGTGAT +
Preference number: 4 (lower is better)
Translates to: RSYHSWLQCIRGFHRVHGLFWPE*LHSTCD
Trigger: ATCACATGTGGAATGGAGGCACTCAGGCCAAAACAG...TCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCAACTATGGTAAGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TGTAGGGAAGAATATAGAACCTGTGTCAATTGGGCCAAGATGTCTTGGATTTCACAGATTCCATTGGGTTaGACATTGGGAGGAGAGCGC +
Preference number: 4 (lower is better)
Translates to: CREEYRTCVNWAKMSWISQIPLG*TLGGER
Trigger: GCGCTCTCCTCCCAATGTGCAACCCAATGGAATCTG...TGAAATCCAAGACATCTTGGCCCAATTGACACAGGTTCTATATTCTTCCCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCCAGATTCCATTGGGTTaGACATTGGGAGGAGAGCGC +
Preference number: 4 (lower is better)
Translates to: CSSFFIPTLNKPRVWYFFQIPLG*TLGGER
Trigger: GCGCTCTCCTCCCAATGTGCAACCCAATGGAATCTG...GAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
CDS-3UTR GCA 90 bp AAAGTAGCACTAACATACCAGCTTAAATGCCCAGAAGAGGAGTGGGTTATTCTTCAGATTCCATTGGGTTaGACATTGGGAGGAGAGCGC +
Preference number: 4 (lower is better)
Translates to: KVALTYQLKCPEEEWVILQIPLG*TLGGER
Trigger: GCGCTCTCCTCCCAATGTGCAACCCAATGGAATCTG...AAGAATAACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGTTAGTGCTACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp GACCTCTCTGTCGCCTTAGGTTCTCAATCTGAACAAAAAGATACTAAGCGGCAGACATACCAGCTTAAATaGCCAGAAGAGGAGTGGGTT +
Preference number: 4 (lower is better)
Translates to: DLSVALGSQSEQKDTKRQTYQLK*PEEEWV
Trigger: AACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGT...CTGCCGCTTAGTATCTTTTTGTTCAGATTGAGAACCTAAGGCGACAGAGAGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp GGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGTGCCAGAGGAGAAGTCTGAGTTCTTaGCCCATCGACATTCAACAG +
Preference number: 4 (lower is better)
Translates to: GTNFLSMCSLSLKWPCQRRSLSS*PIDIQQ
Trigger: CTGTTGAATGTCGATGGGGCAAGAACTCAGACTTCT...CCTCTGGCACGGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR GCA 90 bp ATTCCATTGGGTTGCACATTGGGAGGAGAGCGCTTCCAGTCCCACGTCTTTACACAAAGGTTTTCATGTTaGTTTACAAATCCGGAATGG +
Preference number: 4 (lower is better)
Translates to: IPLGCTLGGERFQSHVFTQRFSC*FTNPEW
Trigger: CCATTCCGGATTTGTAAAGCAACATGAAAACCTTTG...TGTAAAGACGTGGGACTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGGGAGAGAAGGACAAGTaGTCCCTGCTTAGAGAGGAC +
Preference number: 4 (lower is better)
Translates to: FPFLRLLLFSGVRGKSAKGEKDK*SLLRED
Trigger: GTCCTCTCTAAGCAGGGAGCACTTGTCCTTCTCTCC...CTTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp CCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTAGGAAAGTGGCAATGGGATaGATCTTGAGCTTAGAGAAT +
Preference number: 4 (lower is better)
Translates to: PESESIPSSRGSLLSIFRKVAMG*ILSLEN
Trigger: ATTCTCTAAGCTCAAGATGCATCCCATTGCCACTTT...CCTAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR GCA 90 bp GTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTAGGCACTGAACTTAGCTTCTCAAACTaGTGGTATTACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: VSLSRLAGDLYSQSLGTELSFSN*WYYRCE
Trigger: CTCACACCTGTAATACCAGCAGTTTGAGAAGCTAAG...TTCAGTGCCTAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000642952.1
CDS-3UTR GCA 90 bp CCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTAGGATCATTTCCACTGTGTaGTATCAAATCCAATTCGGC +
Preference number: 4 (lower is better)
Translates to: PESESIPSSRGSLLSIFRIISTV*YQIQFG
Trigger: GCCGAATTGGATTTGATAGCACACAGTGGAAATGAT...CCTAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374705.5
ENST00000642644.1
ENST00000645933.1
ENST00000675232.1
CDS-3UTR GCA 90 bp GTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACAGTGTACACCCTGCTGATTCTTaGCATAGTTGGCTTCAATGT +
Preference number: 4 (lower is better)
Translates to: VSQGTWTFMSTNSVQHSVHPADS*HSWLQC
Trigger: ACATTGAAGCCAACTATGGCAAGAATCAGCAGGGTG...TACACTGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642952.1
ENST00000644273.1
CDS-3UTR GCA 90 bp AATGTGTTCTTTAAGTCTCAAGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCAAATATGCCACTGTGTaGTATCAAATCCAATTCGGC +
Preference number: 4 (lower is better)
Translates to: NVFFKSQVAVPEVVATPLKYATV*YQIQFG
Trigger: GCCGAATTGGATTTGATAGCACACAGTGGCATATTT...GAGAGGAGTGGCAACTACCTCTGGCACGGCCACTTGAGACTTAAAGAACACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000676192.1
CDS-3UTR GCA 90 bp ATTCCATTGGGTTGCACATTGGGAGGAGAGCGCTTCCAGTCCCACGTCTTTACATTCTACCTGAAAGAATaGTCGAGCTTCTTTATACCT +
Preference number: 4 (lower is better)
Translates to: IPLGCTLGGERFQSHVFTFYLKE*SSFFIP
Trigger: AGGTATAAAGAAGCTCGAGCATTCTTTCAGGTAGAA...TGTAAAGACGTGGGACTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675695.1
CDS-3UTR GCA 90 bp TTTAAGTCTCAAGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACTGGGCTTCCATCTaGCCAATTTCTAATATACTG +
Preference number: 4 (lower is better)
Translates to: FKSQVAVPEVVATPLMKDYWASI*PISNIL
Trigger: CAGTATATTAGAAATTGGGCAGATGGAAGCCCAGTA...GTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCCACTTGAGACTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS-3UTR GCA 90 bp ATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCTCTTTCACCGTTCAATaGCAGCCTTCCCAAATCCTC +
Preference number: 4 (lower is better)
Translates to: MYSRVSQGTWTFMSTNSVSFTVQ*QPSQIL
Trigger: GAGGATTTGGGAAGGCTGGCATTGAACGGTGAAAGA...GACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS-3UTR GCA 90 bp GGCATATGGCTGGGGGAATCTTCCAAAGAAACTACTCTACTCAGCCATCTCCTGAACTACCTATCACAGTaGCTGATAGGTAGCAGATAT +
Preference number: 4 (lower is better)
Translates to: GIWLGESSKETTLLSHLLNYLSQ*LIGSRY
Trigger: ATATCTGCTACCTATCAGGCACTGTGATAGGTAGTT...CAGGAGATGGCTGAGTAGAGTAGTTTCTTTGGAAGATTCCCCCAGCCATATGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR CCA 90 bp GGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGTGCCAGAGAGTGGATCGCATGAGTaGCCAGTTTGCAGATATAGT +
Preference number: 4 (lower is better)
Translates to: GNKFPVNVFFKSQVAVPESGSHE*PVCRYS
Trigger: ACTATATCTGCAAACTGGCCACTCATGCGATCCACT...CTCTGGCACGGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CCA 90 bp CGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGTGCAGTGGATCGCATGAGTaGCCAGTTTGCAGATATAGT +
Preference number: 4 (lower is better)
Translates to: RKGTNFLSMCSLSLKWPCSGSHE*PVCRYS
Trigger: ACTATATCTGCAAACTGGCCACTCATGCGATCCACT...GCACGGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCCCTTCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CCA 90 bp ATTATAATACAAGTGCAAGGGTGGAGGAGAGGGCAGCCCAGACAAATACAACTGAGTGGATCGCATGAGTaGCCAGTTTGCAGATATAGT +
Preference number: 4 (lower is better)
Translates to: IIIQVQGWRRGQPRQIQLSGSHE*PVCRYS
Trigger: ACTATATCTGCAAACTGGCCACTCATGCGATCCACT...CAGTTGTATTTGTCTGGGCTGCCCTCTCCTCCACCCTTGCACTTGTATTATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR CCA 90 bp CTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTGCTGAAAGAAGTGCATTGGATCCTTTaGAATGAGAACTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: LPKGHSFHSVIIKVLLKEVHWIL*NENFQS
Trigger: GGACTGGAAGTTCTCATTCCAAAGGATCCAATGCAC...TTCTTTCAGCAGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR CCA 90 bp GTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACGTGCATTGGATCCTTTaGAATGAGAACTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: VGFNVFEGFTGYMDLHVYVHWIL*NENFQS
Trigger: GGACTGGAAGTTCTCATTCCAAAGGATCCAATGCAC...GTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp ACAGCAAACTCCCTTAGGACAGGAAGAGCGGTCAAGTTTAAGCACAAAACTCCAGTGCATTGGATCCTTTaGAATGAGAACTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: TANSLRTGRAVKFKHKTPVHWIL*NENFQS
Trigger: GGACTGGAAGTTCTCATTCCAAAGGATCCAATGCAC...TGGAGTTTTGTGCTTAAACTTGACCGCTCTTCCTGTCCTAAGGGAGTTTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CCA 90 bp ATAATAGAGATGACAACCACAGCAAACTCCCTTAGGACAGGAAGAGCGGTCAAGGTGCATTGGATCCTTTaGAATGAGAACTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: IIEMTTTANSLRTGRAVKVHWIL*NENFQS
Trigger: GGACTGGAAGTTCTCATTCCAAAGGATCCAATGCAC...CTTGACCGCTCTTCCTGTCCTAAGGGAGTTTGCTGTGGTTGTCATCTCTATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CCA 90 bp CTAGGCTGTGGAGGGCTCTGGATTCCAGTCGACAAATCCAAAACCCTTGCTGATTTCTACAAAGTGCATTaGATCCTTTGGAATGAGAAC +
Preference number: 4 (lower is better)
Translates to: LGCGGLWIPVDKSKTLADFYKVH*ILWNEN
Trigger: GTTCTCATTCCAAAGGATCCAATGCACTTTGTAGAA...ATCAGCAAGGGTTTTGGATTTGTCGACTGGAATCCAGAGCCCTCCACAGCCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR CCA 90 bp CAAGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGAATAAACCTAGAGTGTaGTACTTCTTCTACAAAGTG +
Preference number: 4 (lower is better)
Translates to: QVAVPEVVATPLMKDYQVNKPRV*YFFYKV
Trigger: CACTTTGTAGAAGAAGTACCACACTCTAGGTTTATT...CACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCCACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CCA 90 bp GGGTTAGAAGGTGCCAGGGGGTATTCTAGGGTAGAAGTTTTGATAGTACGGAAGGTTTCACAGGGTACATaGACCTTCATGTCTACAAAC +
Preference number: 4 (lower is better)
Translates to: GLEGARGYSRVEVLIVRKVSQGT*TFMSTN
Trigger: GTTTGTAGACATGAAGGTCCATGTACCCTGTGAAAC...CTTCCGTACTATCAAAACTTCTACCCTAGAATACCCCCTGGCACCTTCTAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642952.1
ENST00000644273.1
ENST00000675695.1
CDS-3UTR CCA 90 bp GACTCCACAATCTTAAAAGTAGCACTAACATACCAGCTTAAATGCCCAGAAGAGGAACTCTTCAAAGGGTaGGGGAGGGTTCCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: DSTILKVALTYQLKCPEEELFKG*GRVPSK
Trigger: CTTTGAGGGAACCCTCCCCCACCCTTTGAAGAGTTC...CTCTTCTGGGCATTTAAGCTGGTATGTTAGTGCTACTTTTAAGATTGTGGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GCCTGGCCTTCAGATTCTAGAGAAGGCTTTTGTTTCCCCAAGTTAGGGTGGAACAACAGACTGAAAAACTaGGGAGGGACACAAACTTTA +
Preference number: 4 (lower is better)
Translates to: AWPSDSREGFCFPKLGWNNRLKN*GGTQTL
Trigger: TAAAGTTTGTGTCCCTCCCCAGTTTTTCAGTCTGTT...GTTCCACCCTAACTTGGGGAAACAAAAGCCTTCTCTAGAATCTGAAGGCCAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GTTGGGTTAGAAGGTGCCAGGGGGTATTCTAGGGTAGAAGTTTTGATAGTACGGGATATAAGAGAGAGATaGGGTAAACAGCATCCTAGC +
Preference number: 4 (lower is better)
Translates to: VGLEGARGYSRVEVLIVRDIRER*GKQHPS
Trigger: GCTAGGATGCTGTTTACCCCATCTCTCTCTTATATC...CCGTACTATCAAAACTTCTACCCTAGAATACCCCCTGGCACCTTCTAACCCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000675695.1
CDS-3UTR CCA 90 bp TCAGTTCCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCGATGATGTGCCATTTTaGGACAAGTTTGCTGACAAT +
Preference number: 4 (lower is better)
Translates to: SVPESESIPSSRGSLLSIDDVPF*DKFADN
Trigger: ATTGTCAGCAAACTTGTCCCAAAATGGCACATCATC...GATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTCGATGATGTGCCATTTTaGGACAAGTTTGCTGACAAT +
Preference number: 4 (lower is better)
Translates to: YQVDRMSGQFADIVQGDFDDVPF*DKFADN
Trigger: ATTGTCAGCAAACTTGTCCCAAAATGGCACATCATC...GAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GGGTTAGAAGGTGCCAGGGGGTATTCTAGGGTAGAAGTTTTGATAGTACGGAAGAGAACCTGTGTCAATTaGGCCAAGATGTCTTGGATT +
Preference number: 4 (lower is better)
Translates to: GLEGARGYSRVEVLIVRKRTCVN*AKMSWI
Trigger: AATCCAAGACATCTTGGCCCAATTGACACAGGTTCT...CTTCCGTACTATCAAAACTTCTACCCTAGAATACCCCCTGGCACCTTCTAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR CCA 90 bp CCTCAGACATTCAGGTTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGACTAACCCAAGGTCTCTaGACACTCCACAGAACCCAA +
Preference number: 4 (lower is better)
Translates to: PQTFRFPFLRLLLFSGVRLTQGL*TLHRTQ
Trigger: TTGGGTTCTGTGGAGTGTCCAGAGACCTTGGGTTAG...TCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAACCTGAATGTCTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GACCTCTCTGTCGCCTTAGGTTCTCAATCTGAACAAAAAGATACTAAGCGGCAGCTCTGGAGACATTCATaGGTGCCTAACTACCAACAA +
Preference number: 4 (lower is better)
Translates to: DLSVALGSQSEQKDTKRQLWRHS*VPNYQQ
Trigger: TTGTTGGTAGTTAGGCACCCATGAATGTCTCCAGAG...CTGCCGCTTAGTATCTTTTTGTTCAGATTGAGAACCTAAGGCGACAGAGAGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GGGAGTCCCAATTGGAAATGGGGAGAAATGTGGAGTGTATGCATTTCTAAATACCTCTCAGGATGTCTCTaGAGACATTCATGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: GSPNWKWGEMWSVCISKYLSGCL*RHSWVP
Trigger: AGGCACCCATGAATGTCTCCAGAGACATCCTGAGAG...GTATTTAGAAATGCATACACTCCACATTTCTCCCCATTTCCAATTGGGACTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TGTCCCACCAAGCAGCTACTCTTAGGGATGCTCAATTTTAGGAACTATGGTTTTCTCTCAGGATGTCTCTaGAGACATTCATGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: CPTKQLLLGMLNFRNYGFLSGCL*RHSWVP
Trigger: AGGCACCCATGAATGTCTCCAGAGACATCCTGAGAG...AAAACCATAGTTCCTAAAATTGAGCATCCCTAAGAGTAGCTGCTTGGTGGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp CTAAGCGGCAGAAACACCCTGAGACTTAGCCTCAATGAAGCACTGGATGCCTTCACTACCTGGTTGTCCTaGTTATCAATTAAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: LSGRNTLRLSLNEALDAFTTWLS*LSIKRN
Trigger: ATTCCTCTTAATTGATAACCAGGACAACCAGGTAGT...GAAGGCATCCAGTGCTTCATTGAGGCTAAGTCTCAGGGTGTTTCTGCCGCTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp CCTCAGACATTCAGGTTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGAGTCACGGCAGTCTTaGGTTTTAGCCTCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: PQTFRFPFLRLLLFSGVRESRQS*VLASAV
Trigger: AACAGCTGAGGCTAAAACCCAAGACTGCCGTGACTC...TCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAACCTGAATGTCTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp CCACGTCTTTACAGGAATCTTCCAGGTCTTACCATAGTTGGCTTCAATGTATTCGAGTCACGGCAGTCTTaGGTTTTAGCCTCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: PRLYRNLPGLTIVGFNVFESRQS*VLASAV
Trigger: AACAGCTGAGGCTAAAACCCAAGACTGCCGTGACTC...GAATACATTGAAGCCAACTATGGTAAGACCTGGAAGATTCCTGTAAAGACGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GGAGACATTCATGGGTGCCTAACTACCAACAAGTTGTCAACTTCCCCAGGTAAGTTACCTGTTAGAAGGTaGGAATGTGGCACTTTCTTG +
Preference number: 4 (lower is better)
Translates to: GDIHGCLTTNKLSTSPGKLPVRR*ECGTFL
Trigger: CAAGAAAGTGCCACATTCCCACCTTCTAACAGGTAA...CTTACCTGGGGAAGTTGACAACTTGTTGGTAGTTAGGCACCCATGAATGTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTAGCCTCCTGTGTAGCTaGGACTATAGGCGTGCACCA +
Preference number: 4 (lower is better)
Translates to: SNLFSKKSTSPFPQTFRFSLLCS*DYRRAP
Trigger: TGGTGCACGCCTATAGTCCCAGCTACACAGGAGGCT...AAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR CCA 90 bp ATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCATCTCTGTATTAGGTTaGGTTAGAAGGTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: MYSRVSQGTWTFMSTNSVISVLG*VRRCQG
Trigger: CCCCTGGCACCTTCTAACCCAACCTAATACAGAGAT...GACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642952.1
ENST00000644273.1
ENST00000675695.1
CDS-3UTR CCA 90 bp TCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCTACAAAGTGCGTAGTCCCAGCTACTTaGGGGTCTGAGCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: SLYLHSINLECGTSSTKCVVPAT*GSEPGG
Trigger: TCCTCCTGGCTCAGACCCCCAAGTAGCTGGGACTAC...GCACTTTGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675443.1
ENST00000675736.1
CDS-3UTR CCA 90 bp AAAGACTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGTACCTTTCAAACTTCTaGCTTCTACCCATACCAGTT +
Preference number: 4 (lower is better)
Translates to: KDYQVDRMSGQFADIVQGYLSNF*LLPIPV
Trigger: AACTGGTATGGGTAGAAGCCAGAAGTTTGAAAGGTA...CCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
CDS-3UTR CCA 90 bp GTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTCAGTTCCTATCTTTCAAACTTCTaGCTTCTACCCATACCAGTT +
Preference number: 4 (lower is better)
Translates to: VDRMSGQFADIVQGDFSSYLSNF*LLPIPV
Trigger: AACTGGTATGGGTAGAAGCCAGAAGTTTGAAAGATA...GGAACTGAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS-3UTR CCA 90 bp TCTTTTCTAAATCTACATGGTCCATCTTCTATAGTGGCTTTATCCTACTTGGACCTACGAAGGCCCACTTaGGCTGTCAGGCCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: SFLNLHGPSSIVALSYLDLRRPT*AVRPQL
Trigger: AAGCTGAGGCCTGACAGCCCAAGTGGGCCTTCGTAG...GTCCAAGTAGGATAAAGCCACTATAGAAGATGGACCATGTAGATTTAGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CCA 90 bp AAGGAGAGCTTTTCCCTTGTTTATGAGGTCACATGCCAGAAATTTGCTTTTTCTCACCGAACTAGGCTGTaGAGGGCTCTGGATTCCAGT +
Preference number: 4 (lower is better)
Translates to: KESFSLVYEVTCQKFAFSHRTRL*RALDSS
Trigger: ACTGGAATCCAGAGCCCTCCACAGCCTAGTTCGGTG...AGAAAAAGCAAATTTCTGGCATGTGACCTCATAAACAAGGGAAAAGCTCTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR CCA 90 bp CATTTCAACCTACTATCTCAATATAACTGGATAACCTCATCCCACTCAGAAATAAGGTGCCCAGAATGCTaGAGGATGCCCGGTAAGGGC +
Preference number: 4 (lower is better)
Translates to: HFNLLSQYNWITSSHSEIRCPEC*RMPGKG
Trigger: GCCCTTACCGGGCATCCTCCAGCATTCTGGGCACCT...TATTTCTGAGTGGGATGAGGTTATCCAGTTATATTGAGATAGTAGGTTGAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS-3UTR CCA 90 bp ATGATAGAAAATCTGGGACTCACACCATCTGTCCAGACAGTTCTATCACTGCTCGCTGTATCATCAACTTaGACTGACAAACCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: MIENLGLTPSVQTVLSLLAVSST*TDKPRD
Trigger: GTCCCTGGGTTTGTCAGTCCAAGTTGATGATACAGC...GAGCAGTGATAGAACTGTCTGGACAGATGGTGTGAGTCCCAGATTTTCTATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675668.1
3UTR CAA 72 bp TGGGTAAGATCTCCTGGCAAAGAATGGGAGTCCCAATaGGAAATGGGGAGAAATGTGGAGTGTATGCATTTC +
Preference number: 4 (lower is better)
Translates to: WVRSPGKEWESQ*EMGRNVECMHF
Trigger: GAAATGCATACACTCCACATTTCTCCCCATTTCCAATTGGGACTCCCATTCTTTGCCAGGAGATCTTACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR CAA 72 bp TCTGGAGACATTCATGGGTGCCTAACTACCAACAAGTaGTCAACTTCCCCAGGTAAGCCAGGTAAACTAAAC +
Preference number: 4 (lower is better)
Translates to: SGDIHGCLTTNK*STSPGKPGKLN
Trigger: GTTTAGTTTACCTGGCTTACCTGGGGAAGTTGACAACTTGTTGGTAGTTAGGCACCCATGAATGTCTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp ACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTGCTGAAAGCTTCCTTTGGATTTTaGCAAACCAGCTCCATTCTT +
Preference number: 4 (lower is better)
Translates to: TLPKGHSFHSVIIKVLLKASFGF*QTSSIL
Trigger: AAGAATGGAGCTGGTTTGTCAAAATCCAAAGGAAGC...TTTCAGCAGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR TCA 90 bp GCCTTTCAAAATCATCTTTATATCCCCAGGGCCAGAAGCCTGCGGAACACAATAGCTTCCTTTGGATTTTaGCAAACCAGCTCCATTCTT +
Preference number: 4 (lower is better)
Translates to: AFQNHLYIPRARSLRNTIASFGF*QTSSIL
Trigger: AAGAATGGAGCTGGTTTGTCAAAATCCAAAGGAAGC...TATTGTGTTCCGCAGGCTTCTGGCCCTGGGGATATAAAGATGATTTTGAAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR TCA 90 bp TCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACAGTGTAAACTCATTCTTCCATAGGTaGTACTGCAGTGCAAATGCA +
Preference number: 4 (lower is better)
Translates to: SQGTWTFMSTNSVQHSVNSFFHR*YCSANA
Trigger: TGCATTTGCACTGCAGTATCACCTATGGAAGAATGA...GTTTACACTGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CCTCTCATGAAAGACTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATATCATTCTTCCATAGGTaGTACTGCAGTGCAAATGCA +
Preference number: 4 (lower is better)
Translates to: PLMKDYQVDRMSGQFADISFFHR*YCSANA
Trigger: TGCATTTGCACTGCAGTATCACCTATGGAAGAATGA...TATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTCTTTCATGAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR TCA 90 bp ATTATAATACAAGTGCAAGGGTGGAGGAGAGGGCAGCCCAGACAAATACAACTGTCATTCTTCCATAGGTaGTACTGCAGTGCAAATGCA +
Preference number: 4 (lower is better)
Translates to: IIIQVQGWRRGQPRQIQLSFFHR*YCSANA
Trigger: TGCATTTGCACTGCAGTATCACCTATGGAAGAATGA...CAGTTGTATTTGTCTGGGCTGCCCTCTCCTCCACCCTTGCACTTGTATTATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR TCA 90 bp CCTTTGCACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTTCAATCTTTAGGCACTaGAATCCCATATTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PLHSSERPQLPQCYHQGTSIFRH*NPIFSA
Trigger: AGCTGAGAATATGGGATTTCAGTGCCTAAAGATTGA...AGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTGCAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR TCA 90 bp GCTTTTCCCTTGTTTATGAGGTCACATGCCAGAAATTTGCTTTTTCTGCTAAGCACCAAGTGGATCGCATaGGTGGCCAGTTTGCAGATA +
Preference number: 4 (lower is better)
Translates to: AFPLFMRSHARNLLFLLSTKWIA*VASLQI
Trigger: TATCTGCAAACTGGCCACTCATGCGATCCACTTGGT...GCTTAGCAGAAAAAGCAAATTTCTGGCATGTGACCTCATAAACAAGGGAAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR TCA 90 bp TGTCCCACCAAGCAGCTACTCTTAGGGATGCTCAATTTTAGGAACTATGGTTTTTTGCCACTCCTCTCATaGAAGACTACCAAGTGGATC +
Preference number: 4 (lower is better)
Translates to: CPTKQLLLGMLNFRNYGFLPLLS*KTTKWI
Trigger: GATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAA...AAAACCATAGTTCCTAAAATTGAGCATCCCTAAGAGTAGCTGCTTGGTGGGACA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CCTCAGACATTCAGGTTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGATTGCCACTCCTCTCATaGAAGACTACCAAGTGGATC +
Preference number: 4 (lower is better)
Translates to: PQTFRFPFLRLLLFSGVRLPLLS*KTTKWI
Trigger: GATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAA...TCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAACCTGAATGTCTGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp ATGATAGAAAATCTGGGACTCACACCATCTGTCCAGACAGTTCTATCACTGCTCTCATCAAGGTACTGCTaGAAGAATGCTCGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: MIENLGLTPSVQTVLSLLSSRYC*KNARAS
Trigger: AGAAGCTCGAGCATTCTTTCAGCAGTACCTTGATGA...GAGCAGTGATAGAACTGTCTGGACAGATGGTGTGAGTCCCAGATTTTCTATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR TCA 90 bp TCTCATGAAAGACTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTTCATCAAGGTACTGCTaGAAGAATGCTCGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SHERLPSGSHEWPVCRYSSSRYC*KNARAS
Trigger: AGAAGCTCGAGCATTCTTTCAGCAGTACCTTGATGA...ACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTCTTTCATGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR TCA 90 bp TGTCCCACCAAGCAGCTACTCTTAGGGATGCTCAATTTTAGGAACTATGGTTTTTCCCAAATTTGTGTTTaGGCGGAAGTCCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: CPTKQLLLGMLNFRNYGFSQICV*AEVLHP
Trigger: AGGATGCAGGACTTCCGCTCAAACACAAATTTGGGA...AAAACCATAGTTCCTAAAATTGAGCATCCCTAAGAGTAGCTGCTTGGTGGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675736.1
CDS-3UTR TCA 90 bp TTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGTCCCAAATTTGTGTTTaGGCGGAAGTCCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: FRKGTNFLSMCSLSLKWPSQICV*AEVLHP
Trigger: AGGATGCAGGACTTCCGCTCAAACACAAATTTGGGA...CGGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCCCTTCCGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR TCA 90 bp TTTAAGTCTCAAGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACATTGTATGTGGCACATaGAAATTCCTCAGTACTAAG +
Preference number: 4 (lower is better)
Translates to: FKSQVAVPEVVATPLMKDIVCGT*KFLSTK
Trigger: CTTAGTACTGAGGAATTTTCATGTGCCACATACAAT...GTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCCACTTGAGACTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
CDS-3UTR TCA 90 bp TGTCCCACCAAGCAGCTACTCTTAGGGATGCTCAATTTTAGGAACTATGGTTTTAACCTGTACAGAACTTaGACTCTTCAAAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: CPTKQLLLGMLNFRNYGFNLYRT*TLQRVG
Trigger: CCCCACCCTTTGAAGAGTTCAAGTTCTGTACAGGTT...AAAACCATAGTTCCTAAAATTGAGCATCCCTAAGAGTAGCTGCTTGGTGGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp TCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACCAAAGTCTGATCACTTaGATATTAACTCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: SRVSQGTWTFMSTNSVQHQSLIT*ILTQTP
Trigger: TGGAGTCTGAGTTAATATTCAAGTGATCAGACTTTG...GTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CTCTCAGGATGTCTCTGGAGACATTCATGGGTGCCTAACTACCAACAAGTTGTCATGGTCTCACTTGAATaGTTTGTCAACAAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: LSGCLWRHSWVPNYQQVVMVSLE*FVNKCH
Trigger: ATGGCACTTGTTGACAAATCATTCAAGTGAGACCAT...GACAACTTGTTGGTAGTTAGGCACCCATGAATGTCTCCAGAGACATCCTGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp ATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACAAACTCTATGATCTaGGGTAGGGTGAATAGTTGT +
Preference number: 4 (lower is better)
Translates to: IRGFHRVHGPSCLQTQSSTNSMI*GRVNSC
Trigger: ACAACTATTCACCCTACCTCAGATCATAGAGTTTGT...GCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GTAACTCTGGCCTGTCAAAAGCTCCTGGATAACGACCAAACTGTAACTTTCGGACTGACTCAGACATCTTaGGGGGAAAAGGAAACTAAA +
Preference number: 4 (lower is better)
Translates to: VTLACQKLLDNDQTVTFGLTQTS*GEKETK
Trigger: TTTAGTTTCCTTTTCCCCTCAAGATGTCTGAGTCAG...TCCGAAAGTTACAGTTTGGTCGTTATCCAGGAGCTTTTGACAGGCCAGAGTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GTTCCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTATGCACTCTATGGGCTaGTTTTCTAGCAAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: VPESESIPSSRGSLLSIFMHSMG*FSSKEK
Trigger: TTTCTCTTTGCTAGAAAATCAGCCCATAGAGTGCAT...AAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GACCTCTCTGTCGCCTTAGGTTCTCAATCTGAACAAAAAGATACTAAGCGGCAGGATCCAATGAGGTACTaGAGATGGATATACCTAACC +
Preference number: 4 (lower is better)
Translates to: DLSVALGSQSEQKDTKRQDPMRY*RWIYLT
Trigger: GGTTAGGTATATCCATCTTCAGTACCTCATTGGATC...CTGCCGCTTAGTATCTTTTTGTTCAGATTGAGAACCTAAGGCGACAGAGAGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CTCTCAGGATGTCTCTGGAGACATTCATGGGTGCCTAACTACCAACAAGTTGTCGTGATGAAAGAAAAGTaGTCCAATGAGGTACTGAAG +
Preference number: 4 (lower is better)
Translates to: LSGCLWRHSWVPNYQQVVVMKEK*SNEVLK
Trigger: CTTCAGTACCTCATTGGATCACTTTTCTTTCATCAC...GACAACTTGTTGGTAGTTAGGCACCCATGAATGTCTCCAGAGACATCCTGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp TTGCACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTGCTGTGATGAAAGAAAAGTaGTCCAATGAGGTACTGAAG +
Preference number: 4 (lower is better)
Translates to: LHSSERPQLPQCYHQGTAVMKEK*SNEVLK
Trigger: CTTCAGTACCTCATTGGATCACTTTTCTTTCATCAC...AGCAGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CCTGAGGCTAAGAACTGTATACTTCATTTAATCCCCCTAAAAACCCTTAGAAGTGCGGCAGAAACACCCTaGGACTTAGCCTCAATGAAG +
Preference number: 4 (lower is better)
Translates to: PEAKNCILHLIPLKTLRSAAETP*DLASMK
Trigger: CTTCATTGAGGCTAAGTCTCAGGGTGTTTCTGCCGC...ACTTCTAAGGGTTTTTAGGGGGATTAAATGAAGTATACAGTTCTTAGCCTCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp AGGAATCTTCCAGGTCTTACCATAGTTGGCTTCAATGTATTCGAGGGTTTCACATTAGCAGGTTGGTGCTaGTGGTTCCCTTGGGAAATA +
Preference number: 4 (lower is better)
Translates to: RNLPGLTIVGFNVFEGFTLAGWC*WFPWEI
Trigger: TATTTCCCAAGGGAACCATCAGCACCAACCTGCTAA...TGTGAAACCCTCGAATACATTGAAGCCAACTATGGTAAGACCTGGAAGATTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp ATCAGCTGTCCCACCAAGCAGCTACTCTTAGGGATGCTCAATTTTAGGAACTATGGTGAGATTTTAGACTaGAGTGTGGAAGCTCATTCC +
Preference number: 4 (lower is better)
Translates to: ISCPTKQLLLGMLNFRNYGEILD*SVEAHS
Trigger: GGAATGAGCTTCCACACTTCAGTCTAAAATCTCACC...ATAGTTCCTAAAATTGAGCATCCCTAAGAGTAGCTGCTTGGTGGGACAGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GCCTGGCCTTCAGATTCTAGAGAAGGCTTTTGTTTCCCCAAGTTAGGGTGGAACTTCTTGACTAGGTTTTaGGGGAATATTTCTCCTAAG +
Preference number: 4 (lower is better)
Translates to: AWPSDSREGFCFPKLGWNFLTRF*GNISPK
Trigger: CTTAGGAGAAATATTCCCTCAAAACCTAGTCAAGAA...GTTCCACCCTAACTTGGGGAAACAAAAGCCTTCTCTAGAATCTGAAGGCCAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CCTTTGCACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTAATGTGGCACTTTCTTaGCTAGGTTTTGAGGGAATA +
Preference number: 4 (lower is better)
Translates to: PLHSSERPQLPQCYHQGTNVALS*LGFEGI
Trigger: TATTCCCTCAAAACCTAGTCAAGAAAGTGCCACATT...AGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTGCAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR TCA 90 bp TTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCAGATTTCAGTCTGATGTaGAGCAGCTTAAAATGGCAT +
Preference number: 4 (lower is better)
Translates to: FEGFTGYMDLHVYKLSPADFSLM*SSLKWH
Trigger: ATGCCATTTTAAGCTGCTTCACATCAGACTGAAATC...TGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000642952.1
ENST00000644273.1
ENST00000675695.1
CDS-3UTR TCA 90 bp CACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATGAACTCTATCGCCCAGGCTaGAGTGCAATGCCGCGATCT +
Preference number: 4 (lower is better)
Translates to: HRTYTKGIAIELVCFTYELYRPG*SAMPRS
Trigger: AGATCGCGGCATTGCACTTCAGCCTGGGCGATAGAG...TTCATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642952.1
ENST00000644273.1
ENST00000675695.1
CDS-3UTR TCA 90 bp ATTGCTATAATAGAGATGACAACCACAGCAAACTCCCTTAGGACAGGAAGAGCGTGGTTGTCTCTAACCTaGAAGAATGCTCGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: IAIIEMTTTANSLRTGRAWLSLT*KNARAS
Trigger: AGAAGCTCGAGCATTCTTTCAGGTTAGAGACAACCA...CGCTCTTCCTGTCCTAAGGGAGTTTGCTGTGGTTGTCATCTCTATTATAGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR TCA 90 bp CCTCTCATGAAAGACTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATATTATCCTACTTGGACTaGGAATACACCACCTTTCAC +
Preference number: 4 (lower is better)
Translates to: PLMKDYQVDRMSGQFADILSYLD*EYTTFH
Trigger: GTGAAAGGTGGTGTATTCTCAGTCCAAGTAGGATAA...TATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTCTTTCATGAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR TCA 90 bp GGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGTGCCAGAGGTTCACAGCTCCACAATaGCTTAAGGAAATAGGGCTA +
Preference number: 4 (lower is better)
Translates to: GTNFLSMCSLSLKWPCQRFTAPQ*LKEIGL
Trigger: TAGCCCTATTTCCTTAAGTCATTGTGGAGCTGTGAA...CCTCTGGCACGGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR GCA 90 bp GCCTCCTTTAAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTCTGCACGCCACTGTGTaGTATCAAATCCAATTCGGC +
Preference number: 4 (lower is better)
Translates to: ASFKHRTYTKGIAIELVCLHATV*YQIQFG
Trigger: GCCGAATTGGATTTGATAGCACACAGTGGCGTGCAG...ACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTTAAAGGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000675695.1
CDS-3UTR GCA 90 bp AGTAACATGATAGAAAATCTGGGACTCACACCATCTGTCCAGACAGTTCTATCACTGCACGCCACTGTGTaGTATCAAATCCAATTCGGC +
Preference number: 4 (lower is better)
Translates to: SNMIENLGLTPSVQTVLSLHATV*YQIQFG
Trigger: GCCGAATTGGATTTGATAGCACACAGTGGCGTGCAG...TGATAGAACTGTCTGGACAGATGGTGTGAGTCCCAGATTTTCTATCATGTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR GCA 90 bp TTCTTTAAGTCTCAAGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAATACTGCAGTGCAAATaGAGTAAAGTCTCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: FFKSQVAVPEVVATPLMKILQCK*SKVSWN
Trigger: GTTCCAAGAGACTTTACTGCATTTGCACTGCAGTAT...TTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCCACTTGAGACTTAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR GCA 90 bp GACTCCACAATCTTAAAAGTAGCACTAACATACCAGCTTAAATGCCCAGAAGAGCGTGCCAGAGGTAGTTaGCACTCCTCTCATGAAAGA +
Preference number: 4 (lower is better)
Translates to: DSTILKVALTYQLKCPEERARGS*HSSHER
Trigger: TCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACG...CTCTTCTGGGCATTTAAGCTGGTATGTTAGTGCTACTTTTAAGATTGTGGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp GCCTCCTTTAAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTCGTGCCAGAGGTAGTTaGCACTCCTCTCATGAAAGA +
Preference number: 4 (lower is better)
Translates to: ASFKHRTYTKGIAIELVCRARGS*HSSHER
Trigger: TCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACG...ACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTTAAAGGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
ENST00000675695.1
CDS-3UTR GCA 90 bp CGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACAACTTCTTCTACAAAGTaGATTGGATCCTTTGGAATG +
Preference number: 4 (lower is better)
Translates to: RGFHRVHGPSCLQTQSSTTSSTK*IGSFGM
Trigger: CATTCCAAAGGATCCAATGCACTTTGTAGAAGAAGT...TGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp GGCATATGGCTGGGGGAATCTTCCAAAGAAACTACTCTACTCAGCCATCTCCTGACTTCTTCTACAAAGTaGATTGGATCCTTTGGAATG +
Preference number: 4 (lower is better)
Translates to: GIWLGESSKETTLLSHLLTSSTK*IGSFGM
Trigger: CATTCCAAAGGATCCAATGCACTTTGTAGAAGAAGT...CAGGAGATGGCTGAGTAGAGTAGTTTCTTTGGAAGATTCCCCCAGCCATATGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR GCA 90 bp ATGGACCTAGGGAATAGCCCTATCCAGGCCCTGGAAAAGGGTTCATGGTCATTTACTTCTTCTACAAAGTaGATTGGATCCTTTGGAATG +
Preference number: 4 (lower is better)
Translates to: MDLGNSPIQALEKGSWSFTSSTK*IGSFGM
Trigger: CATTCCAAAGGATCCAATGCACTTTGTAGAAGAAGT...AAATGACCATGAACCCTTTTCCAGGGCCTGGATAGGGCTATTCCCTAGGTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR GCA 90 bp GTTTTCGCTGCTAGTTGCAGTAATTCCTTTGCACTCTTCCGAAAGGCCACAGCTGTACTGCTGAAAGAATaGTCGAGCTTCTTTATACCT +
Preference number: 4 (lower is better)
Translates to: VFAASCSNSFALFRKATAVLLKE*SSFFIP
Trigger: AGGTATAAAGAAGCTCGAGCATTCTTTCAGCAGTAC...AGCTGTGGCCTTTCGGAAGAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR GCA 90 bp ATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCGTACTGCTGAAAGAATaGTCGAGCTTCTTTATACCT +
Preference number: 4 (lower is better)
Translates to: IRGFHRVHGPSCLQTQSSVLLKE*SSFFIP
Trigger: AGGTATAAAGAAGCTCGAGCATTCTTTCAGCAGTAC...GCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000674563.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TTTCAGTTCCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAAGTACTGCTGAAAGAATaGTCGAGCTTCTTTATACCT +
Preference number: 4 (lower is better)
Translates to: FQFQRVSLSRLAGDLYSQVLLKE*SSFFIP
Trigger: AGGTATAAAGAAGCTCGAGCATTCTTTCAGCAGTAC...TTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAACTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR GCA 90 bp TTCCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTAGTTTTCGCTGCTAGTTaGAGTAATTCCTTTGCACTC +
Preference number: 4 (lower is better)
Translates to: FQRVSLSRLAGDLYSQSLVFAAS*SNSFAL
Trigger: GAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAAC...TAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR GCA 90 bp AACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGTGCCAGAGGTACTAGACAAGTTCCACTaGTCAGCCAGAATGGTACTC +
Preference number: 4 (lower is better)
Translates to: NKFPVNVFFKSQVAVPEVLDKFH*SARMVL
Trigger: GAGTACCATTCTGGCTGAGCAGTGGAACTTGTCTAG...TACCTCTGGCACGGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR GCA 90 bp GATAACGACCAAACTGTAACTTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTCAGATTCCATTGGGTTaGACATTGGGAGGAGAGCGC +
Preference number: 4 (lower is better)
Translates to: DNDQTVTFGREQISCQCVQIPLG*TLGGER
Trigger: GCGCTCTCCTCCCAATGTGCAACCCAATGGAATCTG...AACACATTGACAGGAAATTTGTTCCCTTCCGAAAGTTACAGTTTGGTCGTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
CDS-3UTR GCA 90 bp GGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAAACATACCAGCTTAAATaGCCAGAAGAGGAGTGGGTT +
Preference number: 4 (lower is better)
Translates to: GFNVFEGFTGYMDLHVYKTYQLK*PEEEWV
Trigger: AACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGT...TTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp CCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTAGGTGGATTATGATGATGTaGCATTTTGGGACAAGTTTG +
Preference number: 4 (lower is better)
Translates to: PESESIPSSRGSLLSIFRWIMMM*HFGTSL
Trigger: CAAACTTGTCCCAAAATGGCACATCATCATAATCCA...CCTAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR GCA 90 bp CTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTTGGATTATGATGATGTaGCATTTTGGGACAAGTTTG +
Preference number: 4 (lower is better)
Translates to: LPSGSHEWPVCRYSAGGFWIMMM*HFGTSL
Trigger: CAAACTTGTCCCAAAATGGCACATCATCATAATCCA...AAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR GCA 90 bp GGAGACATTCATGGGTGCCTAACTACCAACAAGTTGTCAACTTCCCCAGGTAAGAAAGTGGCAATGGGATaGATCTTGAGCTTAGAGAAT +
Preference number: 4 (lower is better)
Translates to: GDIHGCLTTNKLSTSPGKKVAMG*ILSLEN
Trigger: ATTCTCTAAGCTCAAGATGCATCCCATTGCCACTTT...CTTACCTGGGGAAGTTGACAACTTGTTGGTAGTTAGGCACCCATGAATGTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp GTTTTCGCTGCTAGTTGCAGTAATTCCTTTGCACTCTTCCGAAAGGCCACAGCTTCCTGCCTATCTATGTaGCATTTGAAGTACTGTAGT +
Preference number: 4 (lower is better)
Translates to: VFAASCSNSFALFRKATASCLSM*HLKYCS
Trigger: ACTACAGTACTTCAAATGGCACATAGATAGGCAGGA...AGCTGTGGCCTTTCGGAAGAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR GCA 90 bp GGAGACATTCATGGGTGCCTAACTACCAACAAGTTGTCAACTTCCCCAGGTAAGTCCTGCCTATCTATGTaGCATTTGAAGTACTGTAGT +
Preference number: 4 (lower is better)
Translates to: GDIHGCLTTNKLSTSPGKSCLSM*HLKYCS
Trigger: ACTACAGTACTTCAAATGGCACATAGATAGGCAGGA...CTTACCTGGGGAAGTTGACAACTTGTTGGTAGTTAGGCACCCATGAATGTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TCTGATGTGAAGCAGCTTAAAATGGCATCATGCACCCTGCTGATTCTTGCCATACTTAAAATGGCATCATaGACCCTGCTGATTCTTGCC +
Preference number: 4 (lower is better)
Translates to: SDVKQLKMASCTLLILAILKMAS*TLLILA
Trigger: GGCAAGAATCAGCAGGGTGCATGATGCCATTTTAAG...TATGGCAAGAATCAGCAGGGTGCATGATGCCATTTTAAGCTGCTTCACATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642952.1
ENST00000644273.1
CDS-3UTR GCA 90 bp AAGCAGCTTAAAATGGCATCATGCACCCTGCTGATTCTTGCCATAGTTGGCTTCCTTAGCTTCTCAAACTaGTGGTATTACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: KQLKMASCTLLILAIVGFLSFSN*WYYRCE
Trigger: CTCACACCTGTAATACCAGCAGTTTGAGAAGCTAAG...GAAGCCAACTATGGCAAGAATCAGCAGGGTGCATGATGCCATTTTAAGCTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642952.1
ENST00000644273.1
CDS-3UTR GCA 90 bp GATCTAGCCCAGGTCTTAATGATAGTGGAAGACAAGGAGGAAAGAGGGAACGTTCTTAGCTTCTCAAACTaGTGGTATTACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: DLAQVLMIVEDKEERGNVLSFSN*WYYRCE
Trigger: CTCACACCTGTAATACCAGCAGTTTGAGAAGCTAAG...AACGTTCCCTCTTTCCTCCTTGTCTTCCACTATCATTAAGACCTGGGCTAGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR GCA 90 bp TGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAACACCCTGCTGATTCTTaGCATAGTTGGCTTCAATGT +
Preference number: 4 (lower is better)
Translates to: WLQCIRGFHRVHGPSCLQHPADS*HSWLQC
Trigger: ACATTGAAGCCAACTATGGCAAGAATCAGCAGGGTG...TTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642952.1
ENST00000644273.1
CDS-3UTR GCA 90 bp AATGTGTTCTTTAAGTCTCAAGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCTCTAACCTGAAAGAATaGTCGAGCTTCTTTATACCT +
Preference number: 4 (lower is better)
Translates to: NVFFKSQVAVPEVVATPLSNLKE*SSFFIP
Trigger: AGGTATAAAGAAGCTCGAGCATTCTTTCAGGTTAGA...GAGAGGAGTGGCAACTACCTCTGGCACGGCCACTTGAGACTTAAAGAACACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR GCA 90 bp ATAATAGAGATGACAACCACAGCAAACTCCCTTAGGACAGGAAGAGCGGTCAAGATTCATGAGGCTGGCTaGATAAATTTCACAGCTCCA +
Preference number: 4 (lower is better)
Translates to: IIEMTTTANSLRTGRAVKIHEAG*INFTAP
Trigger: TGGAGCTGTGAAATTTATGCAGCCAGCCTCATGAAT...CTTGACCGCTCTTCCTGTCCTAAGGGAGTTTGCTGTGGTTGTCATCTCTATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR GCA 90 bp AAGGAGAGCTTTTCCCTTGTTTATGAGGTCACATGCCAGAAATTTGCTTTTTCTGCTGGATTAGACGGTTaGCCAGTTTGGGCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: KESFSLVYEVTCQKFAFSAGLDG*PVWAPK
Trigger: CTTTGGAGCCCAAACTGGGCAACCGTCTAATCCAGC...AGAAAAAGCAAATTTCTGGCATGTGACCTCATAAACAAGGGAAAAGCTCTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR CCA 90 bp GACCTCTCTGTCGCCTTAGGTTCTCAATCTGAACAAAAAGATACTAAGCGGCAGCAATTCGGCTTCCTTTaGATTTTGACAAACCAGCTC +
Preference number: 4 (lower is better)
Translates to: DLSVALGSQSEQKDTKRQQFGFL*ILTNQL
Trigger: GAGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTG...CTGCCGCTTAGTATCTTTTTGTTCAGATTGAGAACCTAAGGCGACAGAGAGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTCAGTTCCAGATTCTACAAAGTGCATTaGATCCTTTGGAATGAGAAC +
Preference number: 4 (lower is better)
Translates to: DRMSGQFADIVQGDFSSRFYKVH*ILWNEN
Trigger: GTTCTCATTCCAAAGGATCCAATGCACTTTGTAGAA...TCTGGAACTGAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CCA 90 bp TTTAAGTCTCAAGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTTCTACAAAGTGCATTaGATCCTTTGGAATGAGAAC +
Preference number: 4 (lower is better)
Translates to: FKSQVAVPEVVATPLMKDFYKVH*ILWNEN
Trigger: GTTCTCATTCCAAAGGATCCAATGCACTTTGTAGAA...GTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCCACTTGAGACTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CCA 90 bp ATGAAAGACTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGAGGTCTTACCATAGTTaGCTTCAATGTATTCGAGGG +
Preference number: 4 (lower is better)
Translates to: MKDYQVDRMSGQFADIVQRSYHS*LQCIRG
Trigger: CCCTCGAATACATTGAAGCCAACTATGGTAAGACCT...CTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTCTTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
CDS-3UTR CCA 90 bp GGGTTAGAAGGTGCCAGGGGGTATTCTAGGGTAGAAGTTTTGATAGTACGGAAGCAGCTATTTAGAATTTaGGAATGCACTCTATGGGCT +
Preference number: 4 (lower is better)
Translates to: GLEGARGYSRVEVLIVRKQLFRI*ECTLWA
Trigger: AGCCCATAGAGTGCATTCCCAAATTCTAAATAGCTG...CTTCCGTACTATCAAAACTTCTACCCTAGAATACCCCCTGGCACCTTCTAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR CCA 90 bp TTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACCTCATCAAGTAGGGTaGATTTTGCCCAAAAATAGT +
Preference number: 4 (lower is better)
Translates to: FEGFTGYMDLHVYKLSPAPHQVG*ILPKNS
Trigger: ACTATTTTTGGGCAAAATCCACCCTACTTGATGAGG...TGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TGTCCCACCAAGCAGCTACTCTTAGGGATGCTCAATTTTAGGAACTATGGTTTTATGGGTAAGATCTCCTaGCAAAGAATGGGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: CPTKQLLLGMLNFRNYGFMGKIS*QRMGVP
Trigger: TGGGACTCCCATTCTTTGCCAGGAGATCTTACCCAT...AAAACCATAGTTCCTAAAATTGAGCATCCCTAAGAGTAGCTGCTTGGTGGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGCTAACCCAAGGTCTCTaGACACTCCACAGAACCCAA +
Preference number: 4 (lower is better)
Translates to: FPFLRLLLFSGVRGKSAKLTQGL*TLHRTQ
Trigger: TTGGGTTCTGTGGAGTGTCCAGAGACCTTGGGTTAG...CTTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACAGTGTAAACTTACCTGTTAGAAGGTaGGAATGTGGCACTTTCTTG +
Preference number: 4 (lower is better)
Translates to: SQGTWTFMSTNSVQHSVNLPVRR*ECGTFL
Trigger: CAAGAAAGTGCCACATTCCCACCTTCTAACAGGTAA...GTTTACACTGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACCTTCCTTTCCATAGTTaGCTTCAATGTATTCGAGGG +
Preference number: 4 (lower is better)
Translates to: VGFNVFEGFTGYMDLHVYLPFHS*LQCIRG
Trigger: CCCTCGAATACATTGAAGCCAACTATGGAAAGGAAG...GTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
3UTR CAA 72 bp CCTCAGACATTCAGGTTTCCATTCTTGAGACTACTATaGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: PQTFRFPFLRLL*FSGVRGKSAKL
Trigger: GAGCTTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAACCTGAATGTCTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR CAA 72 bp ACCAGCCCATTCCCTCAGACATTCAGGTTTCCATTCTaGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAA +
Preference number: 4 (lower is better)
Translates to: TSPFPQTFRFPF*RLLLFSGVRGK
Trigger: TTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAACCTGAATGTCTGAGGGAATGGGCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR CAA 72 bp TGTTTAATGTTTTCGCTGCTAGTTGCAGTAATTCCTTaGCACTCTTCCGAAAGGCCACAGCTTCCACAGTGT +
Preference number: 4 (lower is better)
Translates to: CLMFSLLVAVIP*HSSERPQLPQC
Trigger: ACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAACATTAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR TCA 90 bp TGGGGGAATCTTCCAAAGAAACTACTCTACTCAGCCATCTCCTGTTCTTTTCTCGCTTCCTTTGGATTTTaGCAAACCAGCTCCATTCTT +
Preference number: 4 (lower is better)
Translates to: WGNLPKKLLYSAISCSFLASFGF*QTSSIL
Trigger: AAGAATGGAGCTGGTTTGTCAAAATCCAAAGGAAGC...GAGAAAAGAACAGGAGATGGCTGAGTAGAGTAGTTTCTTTGGAAGATTCCCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR TCA 90 bp ATTGCTATAATAGAGATGACAACCACAGCAAACTCCCTTAGGACAGGAAGAGCGTCATTCTTCCATAGGTaGTACTGCAGTGCAAATGCA +
Preference number: 4 (lower is better)
Translates to: IAIIEMTTTANSLRTGRASFFHR*YCSANA
Trigger: TGCATTTGCACTGCAGTATCACCTATGGAAGAATGA...CGCTCTTCCTGTCCTAAGGGAGTTTGCTGTGGTTGTCATCTCTATTATAGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR TCA 90 bp TGGGGGAATCTTCCAAAGAAACTACTCTACTCAGCCATCTCCTGTTCTTTTCTCTCATTCTTCCATAGGTaGTACTGCAGTGCAAATGCA +
Preference number: 4 (lower is better)
Translates to: WGNLPKKLLYSAISCSFLSFFHR*YCSANA
Trigger: TGCATTTGCACTGCAGTATCACCTATGGAAGAATGA...GAGAAAAGAACAGGAGATGGCTGAGTAGAGTAGTTTCTTTGGAAGATTCCCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR TCA 90 bp CTGATGTCTCCAGATGTGAACTGTCTTATTGTCTGGAGAGAAGGCATTTTCCAGTCATTCTTCCATAGGTaGTACTGCAGTGCAAATGCA +
Preference number: 4 (lower is better)
Translates to: LMSPDVNCLIVWREGIFQSFFHR*YCSANA
Trigger: TGCATTTGCACTGCAGTATCACCTATGGAAGAATGA...CTGGAAAATGCCTTCTCTCCAGACAATAAGACAGTTCACATCTGGAGACATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CAGGTACCAAATCTAGTGAAGTACAGTAAACTGCTTGGGACCAGCAAACTAGGTTCATTCTTCCATAGGTaGTACTGCAGTGCAAATGCA +
Preference number: 4 (lower is better)
Translates to: QVPNLVKYSKLLGTSKLGSFFHR*YCSANA
Trigger: TGCATTTGCACTGCAGTATCACCTATGGAAGAATGA...ACCTAGTTTGCTGGTCCCAAGCAGTTTACTGTACTTCACTAGATTTGGTACCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACAGTGTATCAATCTTTAGGCACTaGAATCCCATATTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: VSQGTWTFMSTNSVQHSVSIFRH*NPIFSA
Trigger: AGCTGAGAATATGGGATTTCAGTGCCTAAAGATTGA...TACACTGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GCCAGAATGGTACTCCCAATTTGTTTAATGTTTTCGCTGCTAGTTGCAGTAATTACCAAGTGGATCGCATaGGTGGCCAGTTTGCAGATA +
Preference number: 4 (lower is better)
Translates to: ARMVLPICLMFSLLVAVITKWIA*VASLQI
Trigger: TATCTGCAAACTGGCCACTCATGCGATCCACTTGGT...AATTACTGCAACTAGCAGCGAAAACATTAAACAAATTGGGAGTACCATTCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR TCA 90 bp ATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTCCATTTGCCACTCCTCTCATaGAAGACTACCAAGTGGATC +
Preference number: 4 (lower is better)
Translates to: ICFRKSLPAHSLRHSGFHLPLLS*KTTKWI
Trigger: GATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAA...ATGGAAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CTGGATAACGACCAAACTGTAACTTTCGGAAGGGAACAAATTTCCTGTCAATGTTTGCCACTCCTCTCATaGAAGACTACCAAGTGGATC +
Preference number: 4 (lower is better)
Translates to: LDNDQTVTFGREQISCQCLPLLS*KTTKWI
Trigger: GATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAA...ACATTGACAGGAAATTTGTTCCCTTCCGAAAGTTACAGTTTGGTCGTTATCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR TCA 90 bp ATTTGTGGGTCTTGGGCACTTGACAGTTATATACTTCATTTTCGTATCCCTCGTTTGCCACTCCTCTCATaGAAGACTACCAAGTGGATC +
Preference number: 4 (lower is better)
Translates to: ICGSWALDSYILHFRIPRLPLLS*KTTKWI
Trigger: GATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAA...ACGAGGGATACGAAAATGAAGTATATAACTGTCAAGTGCCCAAGACCCACAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR TCA 90 bp AGTAACATGATAGAAAATCTGGGACTCACACCATCTGTCCAGACAGTTCTATCATTGCCACTCCTCTCATaGAAGACTACCAAGTGGATC +
Preference number: 4 (lower is better)
Translates to: SNMIENLGLTPSVQTVLSLPLLS*KTTKWI
Trigger: GATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAA...TGATAGAACTGTCTGGACAGATGGTGTGAGTCCCAGATTTTCTATCATGTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR TCA 90 bp ATCCCATATTCTCAGCTATCCGAAACCAGCCTTCCTCATTCTTCCATAGGTGATTTGGATCCTTTGGAATaGGAACTTCCAGTCCATCAA +
Preference number: 4 (lower is better)
Translates to: IPYSQLSETSLPHSSIGDLDPLE*ELPVHQ
Trigger: TTGATGGACTGGAAGTTCTCATTCCAAAGGATCCAA...ATCACCTATGGAAGAATGAGGAAGGCTGGTTTCGGATAGCTGAGAATATGGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374705.5
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR TCA 90 bp AGTCCCACGTCTTTACAGGAATCTTCCAGGTCTTACCATAGTTGGCTTCAATGTTTGGATCCTTTGGAATaGGAACTTCCAGTCCATCAA +
Preference number: 4 (lower is better)
Translates to: SPTSLQESSRSYHSWLQCLDPLE*ELPVHQ
Trigger: TTGATGGACTGGAAGTTCTCATTCCAAAGGATCCAA...ACATTGAAGCCAACTATGGTAAGACCTGGAAGATTCCTGTAAAGACGTGGGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp TCCCTTAGGACAGGAAGAGCGGTCAAGTTTAAGCACAAAACTCCATCTCTTCTATTGGATCCTTTGGAATaGGAACTTCCAGTCCATCAA +
Preference number: 4 (lower is better)
Translates to: SLRTGRAVKFKHKTPSLLLDPLE*ELPVHQ
Trigger: TTGATGGACTGGAAGTTCTCATTCCAAAGGATCCAA...TAGAAGAGATGGAGTTTTGTGCTTAAACTTGACCGCTCTTCCTGTCCTAAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR TCA 90 bp CTGATGTCTCCAGATGTGAACTGTCTTATTGTCTGGAGAGAAGGCATTTTCCAGTTGGATCCTTTGGAATaGGAACTTCCAGTCCATCAA +
Preference number: 4 (lower is better)
Translates to: LMSPDVNCLIVWREGIFQLDPLE*ELPVHQ
Trigger: TTGATGGACTGGAAGTTCTCATTCCAAAGGATCCAA...CTGGAAAATGCCTTCTCTCCAGACAATAAGACAGTTCACATCTGGAGACATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GTCTATGTAGGGAAGAATATAGAACCTGTGTCAATTGGGCCAAGATGTCTTGGATCATCAAGGTACTGCTaGAAGAATGCTCGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: VYVGKNIEPVSIGPRCLGSSRYC*KNARAS
Trigger: AGAAGCTCGAGCATTCTTTCAGCAGTACCTTGATGA...TCCAAGACATCTTGGCCCAATTGACACAGGTTCTATATTCTTCCCTACATAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GCACTAACATACCAGCTTAAATGCCCAGAAGAGGAGTGGGTTATTCTTTTCAACTCATCAAGGTACTGCTaGAAGAATGCTCGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: ALTYQLKCPEEEWVILFNSSRYC*KNARAS
Trigger: AGAAGCTCGAGCATTCTTTCAGCAGTACCTTGATGA...GTTGAAAAGAATAACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGTTAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GCCTCCTTTAAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTCCCAAATTTGTGTTTaGGCGGAAGTCCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: ASFKHRTYTKGIAIELVCSQICV*AEVLHP
Trigger: AGGATGCAGGACTTCCGCTCAAACACAAATTTGGGA...ACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTTAAAGGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
CDS-3UTR TCA 90 bp AAAGTAGCACTAACATACCAGCTTAAATGCCCAGAAGAGGAGTGGGTTATTCTTTCCCAAATTTGTGTTTaGGCGGAAGTCCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: KVALTYQLKCPEEEWVILSQICV*AEVLHP
Trigger: AGGATGCAGGACTTCCGCTCAAACACAAATTTGGGA...AAGAATAACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGTTAGTGCTACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CTGGATAACGACCAAACTGTAACTTTCGGAAGGGAACAAATTTCCTGTCAATGTTCCCAAATTTGTGTTTaGGCGGAAGTCCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: LDNDQTVTFGREQISCQCSQICV*AEVLHP
Trigger: AGGATGCAGGACTTCCGCTCAAACACAAATTTGGGA...ACATTGACAGGAAATTTGTTCCCTTCCGAAAGTTACAGTTTGGTCGTTATCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR TCA 90 bp TTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGCTTAGCTTTGCCTGGTaGGCTCATCTTCCAGTTCAA +
Preference number: 4 (lower is better)
Translates to: FPFLRLLLFSGVRGKSAKLSFAW*AHLPVQ
Trigger: TTGAACTGGAAGATGAGCTCACCAGGCAAAGCTAAG...CTTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACAGTGTCAAAGTCTGATCACTTaGATATTAACTCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: GFTGYMDLHVYKLSPAQCQSLIT*ILTQTP
Trigger: TGGAGTCTGAGTTAATATTCAAGTGATCAGACTTTG...ACACTGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GACTCCACAATCTTAAAAGTAGCACTAACATACCAGCTTAAATGCCCAGAAGAGGGTAAAGTAGAAGTCTaGGTTCTTGCCCCATCGACA +
Preference number: 4 (lower is better)
Translates to: DSTILKVALTYQLKCPEEGKVEV*VLAPST
Trigger: TGTCGATGGGGCAAGAACTCAGACTTCTACTTTACC...CTCTTCTGGGCATTTAAGCTGGTATGTTAGTGCTACTTTTAAGATTGTGGAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACAAAACAGCATCCTAGCTaGCTCAGACATCTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: VTFSNLFSKKSTSPFPQTKQHPS*LRHLEG
Trigger: CCCCTCAAGATGTCTGAGTCAGCTAGGATGCTGTTT...TGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp ATGAAAGACTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGTGCATTTCTAAATACTaGGCACAAGCAAATGGTCCT +
Preference number: 4 (lower is better)
Translates to: MKDYQVDRMSGQFADIVQCISKY*AQANGP
Trigger: AGGACCATTTGCTTGTGCTCAGTATTTAGAAATGCA...CTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTCTTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GGGTTAGAAGGTGCCAGGGGGTATTCTAGGGTAGAAGTTTTGATAGTACGGAAGAAGATGAAGTATGGATaGATCAGAATCAGAGGTAAG +
Preference number: 4 (lower is better)
Translates to: GLEGARGYSRVEVLIVRKKMKYG*IRIRGK
Trigger: CTTACCTCTGATTCTGATTCATCCATACTTCATCTT...CTTCCGTACTATCAAAACTTCTACCCTAGAATACCCCCTGGCACCTTCTAACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR TCA 90 bp CTGATGTCTCCAGATGTGAACTGTCTTATTGTCTGGAGAGAAGGCATTTTCCAGGATCCAATGAGGTACTaGAGATGGATATACCTAACC +
Preference number: 4 (lower is better)
Translates to: LMSPDVNCLIVWREGIFQDPMRY*RWIYLT
Trigger: GGTTAGGTATATCCATCTTCAGTACCTCATTGGATC...CTGGAAAATGCCTTCTCTCCAGACAATAAGACAGTTCACATCTGGAGACATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GTAACTCTGGCCTGTCAAAAGCTCCTGGATAACGACCAAACTGTAACTTTCGGAGTCAGATTAGGAGAATaGCTGCTAGAATACTCAAGT +
Preference number: 4 (lower is better)
Translates to: VTLACQKLLDNDQTVTFGVRLGE*LLEYSS
Trigger: ACTTGAGTATTCTAGCAGTCATTCTCCTAATCTGAC...TCCGAAAGTTACAGTTTGGTCGTTATCCAGGAGCTTTTGACAGGCCAGAGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR TCA 90 bp AAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTCTTTAGAGAGGACTGGGTaGCTACCTGGTTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: KVFMLLYKSGMGGCKLLSLERTG*LPGCPG
Trigger: ACCAGGACAACCAGGTAGTCACCCAGTCCTCTCTAA...AGAAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GTTGGGTTAGAAGGTGCCAGGGGGTATTCTAGGGTAGAAGTTTTGATAGTACGGTTCCAGATAAAGGTATaGAGGTTGCCTAAGAATTCT +
Preference number: 4 (lower is better)
Translates to: VGLEGARGYSRVEVLIVRFQIKV*RLPKNS
Trigger: AGAATTCTTAGGCAACCTTCATACCTTTATCTGGAA...CCGTACTATCAAAACTTCTACCCTAGAATACCCCCTGGCACCTTCTAACCCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000675695.1
CDS-3UTR TCA 90 bp AGGAGCTTGTTAATGGGTCCCTACAAAATCTCTGTATTAGGTTGGGTTAGAAGGGGTGAGATTTTAGACTaGAGTGTGGAAGCTCATTCC +
Preference number: 4 (lower is better)
Translates to: RSLLMGPYKISVLGWVRRGEILD*SVEAHS
Trigger: GGAATGAGCTTCCACACTTCAGTCTAAAATCTCACC...CCTTCTAACCCAACCTAATACAGAGATTTTGTAGGGACCCATTAACAAGCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000675695.1
CDS-3UTR TCA 90 bp CGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGTGCAGCCATAAGTTTGGGTaGGATTTTAGACTGAAGTGT +
Preference number: 4 (lower is better)
Translates to: RKGTNFLSMCSLSLKWPCSHKFG*DFRLKC
Trigger: ACACTTCAGTCTAAAATCTCACCCAAACTTATGGCT...GCACGGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCCCTTCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR TCA 90 bp AATTCCTTTGCACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTCTACCCATACCAGTTaGTTCAAAATGGGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: NSFALFRKATASTVLSSRSTHTS*FKMGRK
Trigger: TTTCCTTCCCATTTTGAATCAACTGGTATGGGTAGA...CCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTGCAAAGGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
CDS-3UTR TCA 90 bp ACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTGCTGAAATCTACCCATACCAGTTaGTTCAAAATGGGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: TLPKGHSFHSVIIKVLLKSTHTS*FKMGRK
Trigger: TTTCCTTCCCATTTTGAATCAACTGGTATGGGTAGA...TTTCAGCAGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CCTGCTGATTCTTGCCATAGTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTAACAATGAAGTTGAATTaGGGCAGAACTCATGGTCTA +
Preference number: 4 (lower is better)
Translates to: PADSCHSWLQCIRGFHRVTMKLN*GRTHGL
Trigger: TAGACCATGAGTTCTGCCTCAATTCAACTTCATTGT...TACCCTGTGAAACCCTCGAATACATTGAAGCCAACTATGGCAAGAATCAGCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644273.1
CDS-3UTR TCA 90 bp TCTCATGAAAGACTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTTTATCCTACTTGGACTaGGAATACACCACCTTTCAC +
Preference number: 4 (lower is better)
Translates to: SHERLPSGSHEWPVCRYSLSYLD*EYTTFH
Trigger: GTGAAAGGTGGTGTATTCTCAGTCCAAGTAGGATAA...ACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTCTTTCATGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR TCA 90 bp GGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGTGCCAGAGGTGGGTCTTGGGCACTTaGCAGTTATATACTTCATTT +
Preference number: 4 (lower is better)
Translates to: GTNFLSMCSLSLKWPCQRWVLGT*QLYTSF
Trigger: AAATGAAGTATATAACTGTCAAGTGCCCAAGACCCA...CCTCTGGCACGGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR GCA 90 bp AGCTTGTGGTCTTTTTATGGCAACACATTGCCTTCCCTGAGTGAGATGTTAGAGCTCATTAGTCTGTGCTaGTCACTTGGTTGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: SLWSFYGNTLPSLSEMLELISLC*SLGCLL
Trigger: CAAAAGACAACCAAGTGAGCAGCACAGACTAATGAG...CTCTAACATCTCACTCAGGGAAGGCAATGTGTTGCCATAAAAAGACCACAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp ACTCCCAATTTGTTTAATGTTTTCGCTGCTAGTTGCAGTAATTCCTTTGCACTCCTGCACGCCACTGTGTaGTATCAAATCCAATTCGGC +
Preference number: 4 (lower is better)
Translates to: TPNLFNVFAASCSNSFALLHATV*YQIQFG
Trigger: GCCGAATTGGATTTGATAGCACACAGTGGCGTGCAG...GAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAACATTAAACAAATTGGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602661.6
ENST00000675736.1
CDS-3UTR GCA 90 bp AAACCTCAGATTTGTGGGTCTTGGGCACTTGACAGTTATATACTTCATTTTCGTCTGCACGCCACTGTGTaGTATCAAATCCAATTCGGC +
Preference number: 4 (lower is better)
Translates to: KPQICGSWALDSYILHFRLHATV*YQIQFG
Trigger: GCCGAATTGGATTTGATAGCACACAGTGGCGTGCAG...ACGAAAATGAAGTATATAACTGTCAAGTGCCCAAGACCCACAAATCTGAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675443.1
CDS-3UTR GCA 90 bp TTTTCGCTGCTAGTTGCAGTAATTCCTTTGCACTCTTCCGAAAGGCCACAGCTTATACTGCAGTGCAAATaGAGTAAAGTCTCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: FSLLVAVIPLHSSERPQLILQCK*SKVSWN
Trigger: GTTCCAAGAGACTTTACTGCATTTGCACTGCAGTAT...AAGCTGTGGCCTTTCGGAAGAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR GCA 90 bp GTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACAGTGTAATACTGCAGTGCAAATaGAGTAAAGTCTCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: VSQGTWTFMSTNSVQHSVILQCK*SKVSWN
Trigger: GTTCCAAGAGACTTTACTGCATTTGCACTGCAGTAT...TACACTGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp AATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTCATGAGTGGCCAGTTTaGAGATATAGTGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: NARASLYLHSINLECGTSHEWPV*RYSAGG
Trigger: TCCCCCTGCACTATATCTGCAAACTGGCCACTCATG...AGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR GCA 90 bp TACAGTACTGACAGTAGCTACTACTTACACAATACTTACAATGTGCCAGGTACTCATGAGTGGCCAGTTTaGAGATATAGTGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: YSTDSSYYLHNTYNVPGTHEWPV*RYSAGG
Trigger: TCCCCCTGCACTATATCTGCAAACTGGCCACTCATG...AGTACCTGGCACATTGTAAGTATTGTGTAAGTAGTAGCTACTGTCAGTACTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR GCA 90 bp GCAAATGCAGTAAAGTCTCTTGGAACACAGAAAAACTTGCATTGTGAAGTAGAGCGTGCCAGAGGTAGTTaGCACTCCTCTCATGAAAGA +
Preference number: 4 (lower is better)
Translates to: ANAVKSLGTQKNLHCEVERARGS*HSSHER
Trigger: TCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACG...CTCTACTTCACAATGCAAGTTTTTCTGTGTTCCAAGAGACTTTACTGCATTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR GCA 90 bp TTACACTTGCCACATTTCAAATATTCAGTAGTCATGTGGCTAGTGGCTACAGATCGTGCCAGAGGTAGTTaGCACTCCTCTCATGAAAGA +
Preference number: 4 (lower is better)
Translates to: LHLPHFKYSVVMWLVATDRARGS*HSSHER
Trigger: TCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACG...ATCTGTAGCCACTAGCCACATGACTACTGAATATTTGAAATGTGGCAAGTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR GCA 90 bp CGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCTACACGTGCCAGAGGTAGTTaGCACTCCTCTCATGAAAGA +
Preference number: 4 (lower is better)
Translates to: RASLYLHSINLECGTSSTRARGS*HSSHER
Trigger: TCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACG...TGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR GCA 90 bp GGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACAGTGTACTTCTTCTACAAAGTaGATTGGATCCTTTGGAATG +
Preference number: 4 (lower is better)
Translates to: GFTGYMDLHVYKLSPAQCTSSTK*IGSFGM
Trigger: CATTCCAAAGGATCCAATGCACTTTGTAGAAGAAGT...ACACTGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TTTCAGTTCCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAAACTTCTTCTACAAAGTaGATTGGATCCTTTGGAATG +
Preference number: 4 (lower is better)
Translates to: FQFQRVSLSRLAGDLYSQTSSTK*IGSFGM
Trigger: CATTCCAAAGGATCCAATGCACTTTGTAGAAGAAGT...TTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAACTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR GCA 90 bp CCAGTCGACAAATCCAAAACCCTTGCTGATCCCATAAAACCCTATAGATCTGCAGTTTTCGCTGCTAGTTaGAGTAATTCCTTTGCACTC +
Preference number: 4 (lower is better)
Translates to: PVDKSKTLADPIKPYRSAVFAAS*SNSFAL
Trigger: GAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAAC...TGCAGATCTATAGGGTTTTATGGGATCAGCAAGGGTTTTGGATTTGTCGACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR GCA 90 bp ATGATAGAAAATCTGGGACTCACACCATCTGTCCAGACAGTTCTATCACTGCTCGTTTTCGCTGCTAGTTaGAGTAATTCCTTTGCACTC +
Preference number: 4 (lower is better)
Translates to: MIENLGLTPSVQTVLSLLVFAAS*SNSFAL
Trigger: GAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAAC...GAGCAGTGATAGAACTGTCTGGACAGATGGTGTGAGTCCCAGATTTTCTATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR GCA 90 bp GCCTCCTTTAAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTCTAGACAAGTTCCACTaGTCAGCCAGAATGGTACTC +
Preference number: 4 (lower is better)
Translates to: ASFKHRTYTKGIAIELVCLDKFH*SARMVL
Trigger: GAGTACCATTCTGGCTGAGCAGTGGAACTTGTCTAG...ACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTTAAAGGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
CDS-3UTR GCA 90 bp GTTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAACTAGACAAGTTCCACTaGTCAGCCAGAATGGTACTC +
Preference number: 4 (lower is better)
Translates to: VSILETTIVLWCQRKICQLDKFH*SARMVL
Trigger: GAGTACCATTCTGGCTGAGCAGTGGAACTTGTCTAG...TTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675736.1
CDS-3UTR GCA 90 bp GAATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCCTAGACAAGTTCCACTaGTCAGCCAGAATGGTACTC +
Preference number: 4 (lower is better)
Translates to: ECSSFFIPTLNKPRVWYFLDKFH*SARMVL
Trigger: GAGTACCATTCTGGCTGAGCAGTGGAACTTGTCTAG...GAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR GCA 90 bp GCTTTTCCCTTGTTTATGAGGTCACATGCCAGAAATTTGCTTTTTCTGCTAAGCCTAGACAAGTTCCACTaGTCAGCCAGAATGGTACTC +
Preference number: 4 (lower is better)
Translates to: AFPLFMRSHARNLLFLLSLDKFH*SARMVL
Trigger: GAGTACCATTCTGGCTGAGCAGTGGAACTTGTCTAG...GCTTAGCAGAAAAAGCAAATTTCTGGCATGTGACCTCATAAACAAGGGAAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR GCA 90 bp TTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGCTGTTTTGGCCTGAGTaGCTCCATTCCACATGTGAT +
Preference number: 4 (lower is better)
Translates to: FPFLRLLLFSGVRGKSAKLFWPE*LHSTCD
Trigger: ATCACATGTGGAATGGAGGCACTCAGGCCAAAACAG...CTTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp AGGAGAGCTTTTCCCTTGTTTATGAGGTCACATGCCAGAAATTTGCTTTTTCTGCTGTTTTGGCCTGAGTaGCTCCATTCCACATGTGAT +
Preference number: 4 (lower is better)
Translates to: RRAFPLFMRSHARNLLFLLFWPE*LHSTCD
Trigger: ATCACATGTGGAATGGAGGCACTCAGGCCAAAACAG...CAGAAAAAGCAAATTTCTGGCATGTGACCTCATAAACAAGGGAAAAGCTCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR GCA 90 bp TGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCCAGATTCCATTGGGTTaGACATTGGGAGGAGAGCGC +
Preference number: 4 (lower is better)
Translates to: CKLLSLICFRKSLPAHSLQIPLG*TLGGER
Trigger: GCGCTCTCCTCCCAATGTGCAACCCAATGGAATCTG...GAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp AGAGGAAAATCTGCCAAGCTCCAGAAAGTAGTCCTAAATAGCATAGATAAGATACAGATTCCATTGGGTTaGACATTGGGAGGAGAGCGC +
Preference number: 4 (lower is better)
Translates to: RGKSAKLQKVVLNSIDKIQIPLG*TLGGER
Trigger: GCGCTCTCCTCCCAATGTGCAACCCAATGGAATCTG...TATCTTATCTATGCTATTTAGGACTACTTTCTGGAGCTTGGCAGATTTTCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TTTCAGTTCCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAACAAAGGTTTTCATGTTaGTTTACAAATCCGGAATGG +
Preference number: 4 (lower is better)
Translates to: FQFQRVSLSRLAGDLYSQQRFSC*FTNPEW
Trigger: CCATTCCGGATTTGTAAAGCAACATGAAAACCTTTG...TTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAACTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000642537.1
ENST00000645933.1
ENST00000675736.1
CDS-3UTR GCA 90 bp GGAGACATTCATGGGTGCCTAACTACCAACAAGTTGTCAACTTCCCCAGGTAAGTGGATTATGATGATGTaGCATTTTGGGACAAGTTTG +
Preference number: 4 (lower is better)
Translates to: GDIHGCLTTNKLSTSPGKWIMMM*HFGTSL
Trigger: CAAACTTGTCCCAAAATGGCACATCATCATAATCCA...CTTACCTGGGGAAGTTGACAACTTGTTGGTAGTTAGGCACCCATGAATGTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp AGAGGAAAATCTGCCAAGCTCCAGAAAGTAGTCCTAAATAGCATAGATAAGATAGGAGAGAAGGACAAGTaGTCCCTGCTTAGAGAGGAC +
Preference number: 4 (lower is better)
Translates to: RGKSAKLQKVVLNSIDKIGEKDK*SLLRED
Trigger: GTCCTCTCTAAGCAGGGAGCACTTGTCCTTCTCTCC...TATCTTATCTATGCTATTTAGGACTACTTTCTGGAGCTTGGCAGATTTTCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp CCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGCTCCTTAGCTTCTCAAACTaGTGGTATTACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: PFLRLLLFSGVRGKSAKLLSFSN*WYYRCE
Trigger: CTCACACCTGTAATACCAGCAGTTTGAGAAGCTAAG...GAGCTTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR GCA 90 bp TTAAATGCCCAGAAGAGGAGTGGGTTATTCTTTTCAACTAGTATATCCTTCCTTGCTCACTGCAGACTCTaGTTCCCGGGTTCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: LNAQKRSGLFFSTSISFLAHCRL*FPGSSD
Trigger: ATCACTTGAACCCGGGAAGCAGAGTCTGCAGTGAGC...AAGGAAGGATATACTAGTTGAAAAGAATAACCCACTCCTCTTCTGGGCATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR GCA 90 bp GGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGTGCCAGAGATCATTTCCACTGTGTaGTATCAAATCCAATTCGGC +
Preference number: 4 (lower is better)
Translates to: GNKFPVNVFFKSQVAVPEIISTV*YQIQFG
Trigger: GCCGAATTGGATTTGATAGCACACAGTGGAAATGAT...CTCTGGCACGGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374705.5
ENST00000642644.1
ENST00000645933.1
ENST00000675232.1
CDS-3UTR GCA 90 bp CAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTAGGCCTGACACCTCTCTTATaGTTGATATCTAAGGTTTAT +
Preference number: 4 (lower is better)
Translates to: QRVSLSRLAGDLYSQSLGLTPLL*LISKVY
Trigger: ATAAACCTTAGATATCAAGCATAAGAGAGGTGTCAG...GCCTAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602661.6
CDS-3UTR GCA 90 bp AGCAAACTAGGTAGCATATGGGATAATATTAGGAGACAACTGCTTAACCAAGAAAGTGAGCCAAGATTGTaGCACTGCACTCAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SKLGSIWDNIRRQLLNQESEPRL*HCTQAW
Trigger: CCAGGCTTGAGTGCAGTGGCACAATCTTGGCTCACT...TTCTTGGTTAAGCAGTTGTCTCCTAATATTATCCCATATGCTACCTAGTTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR GCA 90 bp AACTGTAACTTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAGTGAGCCAAGATTGTaGCACTGCACTCAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: NCNFRKGTNFLSMCSLSLSEPRL*HCTQAW
Trigger: CCAGGCTTGAGTGCAGTGGCACAATCTTGGCTCACT...GAGACTTAAAGAACACATTGACAGGAAATTTGTTCCCTTCCGAAAGTTACAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675443.1
ENST00000675736.1
CDS-3UTR GCA 90 bp ATCAAGGTACTGCTGAAAGAATGCTCGAGCTTCTTTATACCTACACTCAATAAAAGTGAGCCAAGATTGTaGCACTGCACTCAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: IKVLLKECSSFFIPTLNKSEPRL*HCTQAW
Trigger: CCAGGCTTGAGTGCAGTGGCACAATCTTGGCTCACT...TTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTCTTTCAGCAGTACCTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
CDS-3UTR CCA 90 bp TTTCAGTTCCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATTCTACAAAGTGCATTaGATCCTTTGGAATGAGAAC +
Preference number: 4 (lower is better)
Translates to: FQFQRVSLSRLAGDLYSQFYKVH*ILWNEN
Trigger: GTTCTCATTCCAAAGGATCCAATGCACTTTGTAGAA...TTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAACTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CCA 90 bp CGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACAAATAAACCTAGAGTGTaGTACTTCTTCTACAAAGTG +
Preference number: 4 (lower is better)
Translates to: RGFHRVHGPSCLQTQSSTNKPRV*YFFYKV
Trigger: CACTTTGTAGAAGAAGTACCACACTCTAGGTTTATT...TGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp CCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTAGGAATAAACCTAGAGTGTaGTACTTCTTCTACAAAGTG +
Preference number: 4 (lower is better)
Translates to: PESESIPSSRGSLLSIFRNKPRV*YFFYKV
Trigger: CACTTTGTAGAAGAAGTACCACACTCTAGGTTTATT...CCTAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CCA 90 bp CTGTCAAATAGGATCTGTGTGCGAGTGGACAAGGACTCAGAGAAAGGACAAGGGAATAAACCTAGAGTGTaGTACTTCTTCTACAAAGTG +
Preference number: 4 (lower is better)
Translates to: LSNRICVRVDKDSEKGQGNKPRV*YFFYKV
Trigger: CACTTTGTAGAAGAAGTACCACACTCTAGGTTTATT...CCCTTGTCCTTTCTCTGAGTCCTTGTCCACTCGCACACAGATCCTATTTGACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR CCA 90 bp CCATATTCTCAGCTATCCGAAACCAGCCTTCCTCATTCTTCCATAGGTGATACTACATCATCTTTTCCCTaGAAGGATAGTTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: PYSQLSETSLPHSSIGDTTSSFP*KDSSKL
Trigger: CAGCTTGGAACTATCCTTCCAGGGAAAAGATGATGT...AGTATCACCTATGGAAGAATGAGGAAGGCTGGTTTCGGATAGCTGAGAATATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000676371.1
CDS-3UTR CCA 90 bp TGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACATCATCTTTTCCCTaGAAGGATAGTTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: WLQCIRGFHRVHGPSCLQTSSFP*KDSSKL
Trigger: CAGCTTGGAACTATCCTTCCAGGGAAAAGATGATGT...TTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp CCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGCTCGTTTCACAGGGTACATaGACCTTCATGTCTACAAAC +
Preference number: 4 (lower is better)
Translates to: PFLRLLLFSGVRGKSAKLVSQGT*TFMSTN
Trigger: GTTTGTAGACATGAAGGTCCATGTACCCTGTGAAAC...GAGCTTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp CAGGTACCAAATCTAGTGAAGTACAGTAAACTGCTTGGGACCAGCAAACTAGGTAGGTCTTACCATAGTTaGCTTCAATGTATTCGAGGG +
Preference number: 4 (lower is better)
Translates to: QVPNLVKYSKLLGTSKLGRSYHS*LQCIRG
Trigger: CCCTCGAATACATTGAAGCCAACTATGGTAAGACCT...ACCTAGTTTGCTGGTCCCAAGCAGTTTACTGTACTTCACTAGATTTGGTACCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp CTCTCAGGATGTCTCTGGAGACATTCATGGGTGCCTAACTACCAACAAGTTGTCCTATCTCAATATAACTaGATAACCTCATCCCACTCA +
Preference number: 4 (lower is better)
Translates to: LSGCLWRHSWVPNYQQVVLSQYN*ITSSHS
Trigger: TGAGTGGGATGAGGTTATCCAGTTATATTGAGATAG...GACAACTTGTTGGTAGTTAGGCACCCATGAATGTCTCCAGAGACATCCTGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GGGTTAGAAGGTGCCAGGGGGTATTCTAGGGTAGAAGTTTTGATAGTACGGAAGCTATCTCAATATAACTaGATAACCTCATCCCACTCA +
Preference number: 4 (lower is better)
Translates to: GLEGARGYSRVEVLIVRKLSQYN*ITSSHS
Trigger: TGAGTGGGATGAGGTTATCCAGTTATATTGAGATAG...CTTCCGTACTATCAAAACTTCTACCCTAGAATACCCCCTGGCACCTTCTAACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR CCA 90 bp ATGGGTGGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCGAACTCTTCAAAGGGTaGGGGAGGGTTCCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: MGGCKLLSLICFRKSLPAELFKG*GRVPSK
Trigger: CTTTGAGGGAACCCTCCCCCACCCTTTGAAGAGTTC...GGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACCACCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTAGGCACAGTTTTGTGAAATCATaGCCTCTTTCAAGATCATGT +
Preference number: 4 (lower is better)
Translates to: ESESIPSSRGSLLSIFRHSFVKS*PLSRSC
Trigger: ACATGATCTTGAAAGAGGCCATGATTTCACAAAACT...GTGCCTAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
CDS-3UTR CCA 90 bp CGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACATTTACAAATCCGGAATaGGTGGTTGTAAGTTACTTT +
Preference number: 4 (lower is better)
Translates to: RGFHRVHGPSCLQTQSSTFTNPE*VVVSYF
Trigger: AAAGTAACTTACAACCACCCATTCCGGATTTGTAAA...TGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp ACTTCCCCAGGTAAGCCAGGTAAACTAAACCTGAAAGTGGTCAGATTAGGAGAATGGGAATGCACTCTATaGGCTGATTTTCTAGCAAAG +
Preference number: 4 (lower is better)
Translates to: TSPGKPGKLNLKVVRLGEWECTL*ADFLAK
Trigger: CTTTGCTAGAAAATCAGCCCATAGAGTGCATTCCCA...TTCTCCTAATCTGACCACTTTCAGGTTTAGTTTACCTGGCTTACCTGGGGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp AGGTCTTACCATAGTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGATGGGAATGCACTCTATaGGCTGATTTTCTAGCAAAG +
Preference number: 4 (lower is better)
Translates to: RSYHSWLQCIRGFHRVHGWECTL*ADFLAK
Trigger: CTTTGCTAGAAAATCAGCCCATAGAGTGCATTCCCA...TCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCAACTATGGTAAGACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp ATAGTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTGGGAATGCACTCTATaGGCTGATTTTCTAGCAAAG +
Preference number: 4 (lower is better)
Translates to: IVGFNVFEGFTGYMDLHVWECTL*ADFLAK
Trigger: CTTTGCTAGAAAATCAGCCCATAGAGTGCATTCCCA...GACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCAACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp ATCTTAAAAGTAGCACTAACATACCAGCTTAAATGCCCAGAAGAGGAGTGGGTTCTGAGCACAAGCAAATaGTCCTCATCAAGTAGGGTG +
Preference number: 4 (lower is better)
Translates to: ILKVALTYQLKCPEEEWVLSTSK*SSSSRV
Trigger: CACCCTACTTGATGAGGACCATTTGCTTGTGCTCAG...AACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGTTAGTGCTACTTTTAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp ATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTCCATCTGAGCACAAGCAAATaGTCCTCATCAAGTAGGGTG +
Preference number: 4 (lower is better)
Translates to: ICFRKSLPAHSLRHSGFHLSTSK*SSSSRV
Trigger: CACCCTACTTGATGAGGACCATTTGCTTGTGCTCAG...ATGGAAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp CTGAAAGAATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGCTGAGCACAAGCAAATaGTCCTCATCAAGTAGGGTG +
Preference number: 4 (lower is better)
Translates to: LKECSSFFIPTLNKPRVWLSTSK*SSSSRV
Trigger: CACCCTACTTGATGAGGACCATTTGCTTGTGCTCAG...CCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTCTTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR CCA 90 bp ATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTCCATATGGGTAAGATCTCCTaGCAAAGAATGGGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: ICFRKSLPAHSLRHSGFHMGKIS*QRMGVP
Trigger: TGGGACTCCCATTCTTTGCCAGGAGATCTTACCCAT...ATGGAAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GTCTATGTAGGGAAGAATATAGAACCTGTGTCAATTGGGCCAAGATGTCTTGGACTCTGGAGACATTCATaGGTGCCTAACTACCAACAA +
Preference number: 4 (lower is better)
Translates to: VYVGKNIEPVSIGPRCLGLWRHS*VPNYQQ
Trigger: TTGTTGGTAGTTAGGCACCCATGAATGTCTCCAGAG...TCCAAGACATCTTGGCCCAATTGACACAGGTTCTATATTCTTCCCTACATAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp CCACGTCTTTACAGGAATCTTCCAGGTCTTACCATAGTTGGCTTCAATGTATTCCTCTGGAGACATTCATaGGTGCCTAACTACCAACAA +
Preference number: 4 (lower is better)
Translates to: PRLYRNLPGLTIVGFNVFLWRHS*VPNYQQ
Trigger: TTGTTGGTAGTTAGGCACCCATGAATGTCTCCAGAG...GAATACATTGAAGCCAACTATGGTAAGACCTGGAAGATTCCTGTAAAGACGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp CCTGAGGCTAAGAACTGTATACTTCATTTAATCCCCCTAAAAACCCTTAGAAGTCTCTCAGGATGTCTCTaGAGACATTCATGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: PEAKNCILHLIPLKTLRSLSGCL*RHSWVP
Trigger: AGGCACCCATGAATGTCTCCAGAGACATCCTGAGAG...ACTTCTAAGGGTTTTTAGGGGGATTAAATGAAGTATACAGTTCTTAGCCTCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GCACTAACATACCAGCTTAAATGCCCAGAAGAGGAGTGGGTTATTCTTTTCAACGACTGGGTGACTACCTaGTTGTCCTGGTTATCAATT +
Preference number: 4 (lower is better)
Translates to: ALTYQLKCPEEEWVILFNDWVTT*LSWLSI
Trigger: AATTGATAACCAGGACAACCAGGTAGTCACCCAGTC...GTTGAAAAGAATAACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGTTAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TTAAATGCCCAGAAGAGGAGTGGGTTATTCTTTTCAACTAGTATATCCTTCCTTCTGCTTAGAGAGGACTaGGTGACTACCTGGTTGTCC +
Preference number: 4 (lower is better)
Translates to: LNAQKRSGLFFSTSISFLLLRED*VTTWLS
Trigger: GGACAACCAGGTAGTCACCCAGTCCTCTCTAAGCAG...AAGGAAGGATATACTAGTTGAAAAGAATAACCCACTCCTCTTCTGGGCATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACGATTCTTGCCATAGTTaGCTTCAATGTATTCGAGGG +
Preference number: 4 (lower is better)
Translates to: ASMYSRVSQGTWTFMSTNDSCHS*LQCIRG
Trigger: CCCTCGAATACATTGAAGCCAACTATGGCAAGAATC...GTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642952.1
ENST00000644273.1
CDS-3UTR CCA 90 bp CACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATGAACGGAAACAGGTATCTTaGCCTCCCGAAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: HRTYTKGIAIELVCFTYERKQVS*PPEVLG
Trigger: TCCCAGCACTTCGGGAGGCCAAGATACCTGTTTCCG...TTCATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642952.1
CDS-3UTR CCA 90 bp GATATAAGATTCAGCTTCCTTTCCATAGTTGGCTTCAATGTATTCGAGGGTTTCTCTCATCAAAAAGCTTaGCCTCCCGAAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: DIRFSFLSIVGFNVFEGFSHQKA*PPEVLG
Trigger: TCCCAGCACTTCGGGAGGCCAAGCTTTTTGATGAGA...GAAACCCTCGAATACATTGAAGCCAACTATGGAAAGGAAGCTGAATCTTATATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642177.1
ENST00000642537.1
CDS-3UTR CCA 90 bp GTCCTGAATGCGAGAGAGTGTGAAATTAGAGTTAGGGACAGAAAGGTAGAAGATGGCACTAACAGCTATTaGAAGGGAGAAGACATGACA +
Preference number: 4 (lower is better)
Translates to: VLNARECEIRVRDRKVEDGTNSY*KGEDMT
Trigger: TGTCATGTCTTCTCCCTTCCAATAGCTGTTAGTGCC...ATCTTCTACCTTTCTGTCCCTAACTCTAATTTCACACTCTCTCGCATTCAGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR CCA 90 bp AAGGAGAGCTTTTCCCTTGTTTATGAGGTCACATGCCAGAAATTTGCTTTTTCTGACGGTTGCCCAGTTTaGGCTCCAAAGCAAACTCTT +
Preference number: 4 (lower is better)
Translates to: KESFSLVYEVTCQKFAFSDGCPV*APKQTL
Trigger: AAGAGTTTGCTTTGGAGCCCAAACTGGGCAACCGTC...AGAAAAAGCAAATTTCTGGCATGTGACCTCATAAACAAGGGAAAAGCTCTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR CCA 90 bp CAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTAAGTGCGGGAAGGACTaGCCAAGTGGAAGTCTACCA +
Preference number: 4 (lower is better)
Translates to: QRFSCCFTNPEWVVVSYFKCGKD*PSGSLP
Trigger: TGGTAGACTTCCACTTGGCCAGTCCTTCCCGCACTT...AAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS-3UTR CCA 90 bp TACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTCTTGATTTTTACCGACTaGAAACGTGCTATCTTCAAA +
Preference number: 4 (lower is better)
Translates to: YQVDRMSGQFADIVQGDFLIFTD*KRAIFK
Trigger: TTTGAAGATAGCACGTTTCCAGTCGGTAAAAATCAA...GAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS-3UTR TCA 90 bp GGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGTGCCAGAGCACTTGGTTGTCTTTTaGAAGTATCTCAGTCGTTTT +
Preference number: 4 (lower is better)
Translates to: GNKFPVNVFFKSQVAVPEHLVVF*KYLSRF
Trigger: AAAACGACTGAGATACTTTCAAAAGACAACCAAGTG...CTCTGGCACGGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000602661.6
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
CDS-3UTR TCA 90 bp GCTACAGATACATCATTTGCAGCATCACACCATGCTCTAGATAATTCTCTGGTCGCTTCCTTTGGATTTTaGCAAACCAGCTCCATTCTT +
Preference number: 4 (lower is better)
Translates to: ATDTSFAASHHALDNSLVASFGF*QTSSIL
Trigger: AAGAATGGAGCTGGTTTGTCAAAATCCAAAGGAAGC...GACCAGAGAATTATCTAGAGCATGGTGTGATGCTGCAAATGATGTATCTGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR TCA 90 bp CCTCAGACATTCAGGTTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGATCATTCTTCCATAGGTaGTACTGCAGTGCAAATGCA +
Preference number: 4 (lower is better)
Translates to: PQTFRFPFLRLLLFSGVRSFFHR*YCSANA
Trigger: TGCATTTGCACTGCAGTATCACCTATGGAAGAATGA...TCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAACCTGAATGTCTGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp TCTCATGAAAGACTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTTCAATCTTTAGGCACTaGAATCCCATATTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SHERLPSGSHEWPVCRYSSIFRH*NPIFSA
Trigger: AGCTGAGAATATGGGATTTCAGTGCCTAAAGATTGA...ACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTCTTTCATGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR TCA 90 bp CCAGTCGACAAATCCAAAACCCTTGCTGATCCCATAAAACCCTATAGATCTGCATCAATCTTTAGGCACTaGAATCCCATATTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PVDKSKTLADPIKPYRSASIFRH*NPIFSA
Trigger: AGCTGAGAATATGGGATTTCAGTGCCTAAAGATTGA...TGCAGATCTATAGGGTTTTATGGGATCAGCAAGGGTTTTGGATTTGTCGACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR TCA 90 bp GTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTCTCTAACCAAGTGGATCGCATaGGTGGCCAGTTTGCAGATA +
Preference number: 4 (lower is better)
Translates to: VFMLLYKSGMGGCKLLSLTKWIA*VASLQI
Trigger: TATCTGCAAACTGGCCACTCATGCGATCCACTTGGT...TAGAGAAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp TCCTTTAAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACCAAGTGGATCGCATaGGTGGCCAGTTTGCAGATA +
Preference number: 4 (lower is better)
Translates to: SFKHRTYTKGIAIELVCFTKWIA*VASLQI
Trigger: TATCTGCAAACTGGCCACTCATGCGATCCACTTGGT...GAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTTAAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
ENST00000675695.1
CDS-3UTR TCA 90 bp ATCAAGGTACTGCTGAAAGAATGCTCGAGCTTCTTTATACCTACACTCAATAAAACCAAGTGGATCGCATaGGTGGCCAGTTTGCAGATA +
Preference number: 4 (lower is better)
Translates to: IKVLLKECSSFFIPTLNKTKWIA*VASLQI
Trigger: TATCTGCAAACTGGCCACTCATGCGATCCACTTGGT...TTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTCTTTCAGCAGTACCTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR TCA 90 bp TCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTACCAAGTGGATCGCATaGGTGGCCAGTTTGCAGATA +
Preference number: 4 (lower is better)
Translates to: SKVFMLLYKSGMGGCKLLTKWIA*VASLQI
Trigger: TATCTGCAAACTGGCCACTCATGCGATCCACTTGGT...AAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTACCAAGTGGATCGCATaGGTGGCCAGTTTGCAGATA +
Preference number: 4 (lower is better)
Translates to: QRFSCCFTNPEWVVVSYFTKWIA*VASLQI
Trigger: TATCTGCAAACTGGCCACTCATGCGATCCACTTGGT...AAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCTACATTGCCACTCCTCTCATaGAAGACTACCAAGTGGATC +
Preference number: 4 (lower is better)
Translates to: RASLYLHSINLECGTSSTLPLLS*KTTKWI
Trigger: GATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAA...TGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR TCA 90 bp AATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTTGCCACTCCTCTCATaGAAGACTACCAAGTGGATC +
Preference number: 4 (lower is better)
Translates to: NARASLYLHSINLECGTSLPLLS*KTTKWI
Trigger: GATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAA...AGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR TCA 90 bp GCCAGAATGGTACTCCCAATTTGTTTAATGTTTTCGCTGCTAGTTGCAGTAATTTTGCCACTCCTCTCATaGAAGACTACCAAGTGGATC +
Preference number: 4 (lower is better)
Translates to: ARMVLPICLMFSLLVAVILPLLS*KTTKWI
Trigger: GATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAA...AATTACTGCAACTAGCAGCGAAAACATTAAACAAATTGGGAGTACCATTCTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR TCA 90 bp GATAACGACCAAACTGTAACTTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTTTGCCACTCCTCTCATaGAAGACTACCAAGTGGATC +
Preference number: 4 (lower is better)
Translates to: DNDQTVTFGREQISCQCVLPLLS*KTTKWI
Trigger: GATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAA...AACACATTGACAGGAAATTTGTTCCCTTCCGAAAGTTACAGTTTGGTCGTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR TCA 90 bp GGGAGTCCCAATTGGAAATGGGGAGAAATGTGGAGTGTATGCATTTCTAAATACTTGGATCCTTTGGAATaGGAACTTCCAGTCCATCAA +
Preference number: 4 (lower is better)
Translates to: GSPNWKWGEMWSVCISKYLDPLE*ELPVHQ
Trigger: TTGATGGACTGGAAGTTCTCATTCCAAAGGATCCAA...GTATTTAGAAATGCATACACTCCACATTTCTCCCCATTTCCAATTGGGACTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GACTCCACAATCTTAAAAGTAGCACTAACATACCAGCTTAAATGCCCAGAAGAGTCATCAAGGTACTGCTaGAAGAATGCTCGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: DSTILKVALTYQLKCPEESSRYC*KNARAS
Trigger: AGAAGCTCGAGCATTCTTTCAGCAGTACCTTGATGA...CTCTTCTGGGCATTTAAGCTGGTATGTTAGTGCTACTTTTAAGATTGTGGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GCCTCCTTTAAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTCATCAAGGTACTGCTaGAAGAATGCTCGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: ASFKHRTYTKGIAIELVCSSRYC*KNARAS
Trigger: AGAAGCTCGAGCATTCTTTCAGCAGTACCTTGATGA...ACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTTAAAGGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
CDS-3UTR TCA 90 bp TTACACTTGCCACATTTCAAATATTCAGTAGTCATGTGGCTAGTGGCTACAGATTCCCAAATTTGTGTTTaGGCGGAAGTCCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: LHLPHFKYSVVMWLVATDSQICV*AEVLHP
Trigger: AGGATGCAGGACTTCCGCTCAAACACAAATTTGGGA...ATCTGTAGCCACTAGCCACATGACTACTGAATATTTGAAATGTGGCAAGTGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR TCA 90 bp TCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTAACCTGTACAGAACTTaGACTCTTCAAAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SNLFSKKSTSPFPQTFRFNLYRT*TLQRVG
Trigger: CCCCACCCTTTGAAGAGTTCAAGTTCTGTACAGGTT...AAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp AGTCCCACGTCTTTACAGGAATCTTCCAGGTCTTACCATAGTTGGCTTCAATGTATGGTCTCACTTGAATaGTTTGTCAACAAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: SPTSLQESSRSYHSWLQCMVSLE*FVNKCH
Trigger: ATGGCACTTGTTGACAAATCATTCAAGTGAGACCAT...ACATTGAAGCCAACTATGGTAAGACCTGGAAGATTCCTGTAAAGACGTGGGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp ATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCACAAACTCTATGATCTaGGGTAGGGTGAATAGTTGT +
Preference number: 4 (lower is better)
Translates to: MYSRVSQGTWTFMSTNSVTNSMI*GRVNSC
Trigger: ACAACTATTCACCCTACCTCAGATCATAGAGTTTGT...GACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp TGTAACTTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGAAACAGCATCCTAGCTaGCTCAGACATCTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: CNFRKGTNFLSMCSLSLKKQHPS*LRHLEG
Trigger: CCCCTCAAGATGTCTGAGTCAGCTAGGATGCTGTTT...CTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCCCTTCCGAAAGTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR TCA 90 bp TGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAAACAGCATCCTAGCTaGCTCAGACATCTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: CKLLSLICFRKSLPAHSLKQHPS*LRHLEG
Trigger: CCCCTCAAGATGTCTGAGTCAGCTAGGATGCTGTTT...GAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATGAATTAGAGAGGACTGGGTaGCTACCTGGTTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: HRTYTKGIAIELVCFTYELERTG*LPGCPG
Trigger: ACCAGGACAACCAGGTAGTCACCCAGTCCTCTCTAA...TTCATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR TCA 90 bp TCCGGAATGGGTGGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTAGCGGCAGAAACACCCTaGGACTTAGCCTCAATGAAG +
Preference number: 4 (lower is better)
Translates to: SGMGGCKLLSLICFRKSLAAETP*DLASMK
Trigger: CTTCATTGAGGCTAAGTCTCAGGGTGTTTCTGCCGC...TAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACCACCCATTCCGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp ATTTATCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTGCGGCAGAAACACCCTaGGACTTAGCCTCAATGAAG +
Preference number: 4 (lower is better)
Translates to: IYQRFSCCFTNPEWVVVSAAETP*DLASMK
Trigger: CTTCATTGAGGCTAAGTCTCAGGGTGTTTCTGCCGC...ACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACAGTGTATTCTTGACTAGGTTTTaGGGGAATATTTCTCCTAAG +
Preference number: 4 (lower is better)
Translates to: VSQGTWTFMSTNSVQHSVFLTRF*GNISPK
Trigger: CTTAGGAGAAATATTCCCTCAAAACCTAGTCAAGAA...TACACTGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CAGGTACCAAATCTAGTGAAGTACAGTAAACTGCTTGGGACCAGCAAACTAGGTAATGTGGCACTTTCTTaGCTAGGTTTTGAGGGAATA +
Preference number: 4 (lower is better)
Translates to: QVPNLVKYSKLLGTSKLGNVALS*LGFEGI
Trigger: TATTCCCTCAAAACCTAGTCAAGAAAGTGCCACATT...ACCTAGTTTGCTGGTCCCAAGCAGTTTACTGTACTTCACTAGATTTGGTACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp ATAGTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCGATTTCAGTCTGATGTaGAGCAGCTTAAAATGGCAT +
Preference number: 4 (lower is better)
Translates to: IVGFNVFEGFTGYMDLHVDFSLM*SSLKWH
Trigger: ATGCCATTTTAAGCTGCTTCACATCAGACTGAAATC...GACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCAACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000642952.1
ENST00000644273.1
ENST00000675695.1
CDS-3UTR TCA 90 bp TTATCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTAAGATCAAGGCTGCAGTaGGCCAAGATTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: LSKVFMLLYKSGMGGCKLRSRLQ*AKIVPL
Trigger: CAGTGGCACAATCTTGGCTCACTGCAGCCTTGATCT...TAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR TCA 90 bp TGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAATCTACCCATACCAGTTaGTTCAAAATGGGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: WLQCIRGFHRVHGPSCLQSTHTS*FKMGRK
Trigger: TTTCCTTCCCATTTTGAATCAACTGGTATGGGTAGA...TTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000644273.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp ATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCTCTACCCATACCAGTTaGTTCAAAATGGGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: MYSRVSQGTWTFMSTNSVSTHTS*FKMGRK
Trigger: TTTCCTTCCCATTTTGAATCAACTGGTATGGGTAGA...GACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000644273.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp ACAGCAAACTCCCTTAGGACAGGAAGAGCGGTCAAGTTTAAGCACAAAACTCCATCAGCTTTTTATTCATaGGGCTGGCTGCATAAATTT +
Preference number: 4 (lower is better)
Translates to: TANSLRTGRAVKFKHKTPSAFYS*GWLHKF
Trigger: AAATTTATGCAGCCAGCCTCATGAATAAAAAGCTGA...TGGAGTTTTGTGCTTAAACTTGACCGCTCTTCCTGTCCTAAGGGAGTTTGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR TCA 90 bp TTCACACTTCCCAAACACTGCTACTATAAAGAGCTGTTAAAGCAGAATGAAAGAATGTCTAACTGGAGGTaGGAATACCGAACCCACAGG +
Preference number: 4 (lower is better)
Translates to: FTLPKHCYYKELLKQNERMSNWR*EYRTHR
Trigger: CCTGTGGGTTCGGTATTCTCACCTCCAGTTAGACAT...TCTTTCATTCTGCTTTAACAGCTCTTTATAGTAGCAGTGTTTGGGAAGTGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR GCA 90 bp GTCTATGTAGGGAAGAATATAGAACCTGTGTCAATTGGGCCAAGATGTCTTGGACTCATTAGTCTGTGCTaGTCACTTGGTTGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: VYVGKNIEPVSIGPRCLGLISLC*SLGCLL
Trigger: CAAAAGACAACCAAGTGAGCAGCACAGACTAATGAG...TCCAAGACATCTTGGCCCAATTGACACAGGTTCTATATTCTTCCCTACATAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp GTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTCTCTACTGCACGCCACTGTGTaGTATCAAATCCAATTCGGC +
Preference number: 4 (lower is better)
Translates to: VFMLLYKSGMGGCKLLSLLHATV*YQIQFG
Trigger: GCCGAATTGGATTTGATAGCACACAGTGGCGTGCAG...TAGAGAAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000642177.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp CATTTCAAATATTCAGTAGTCATGTGGCTAGTGGCTACAGATACATCATTTGCACTGCACGCCACTGTGTaGTATCAAATCCAATTCGGC +
Preference number: 4 (lower is better)
Translates to: HFKYSVVMWLVATDTSFALHATV*YQIQFG
Trigger: GCCGAATTGGATTTGATAGCACACAGTGGCGTGCAG...TGCAAATGATGTATCTGTAGCCACTAGCCACATGACTACTGAATATTTGAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR GCA 90 bp CCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGCTCATACTGCAGTGCAAATaGAGTAAAGTCTCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: PFLRLLLFSGVRGKSAKLILQCK*SKVSWN
Trigger: GTTCCAAGAGACTTTACTGCATTTGCACTGCAGTAT...GAGCTTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAATACTGCAGTGCAAATaGAGTAAAGTCTCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: WLQCIRGFHRVHGPSCLQILQCK*SKVSWN
Trigger: GTTCCAAGAGACTTTACTGCATTTGCACTGCAGTAT...TTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TGGGGGAATCTTCCAAAGAAACTACTCTACTCAGCCATCTCCTGTTCTTTTCTCATACTGCAGTGCAAATaGAGTAAAGTCTCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: WGNLPKKLLYSAISCSFLILQCK*SKVSWN
Trigger: GTTCCAAGAGACTTTACTGCATTTGCACTGCAGTAT...GAGAAAAGAACAGGAGATGGCTGAGTAGAGTAGTTTCTTTGGAAGATTCCCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR GCA 90 bp ATGGGTGGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATGAGTGGCCAGTTTaGAGATATAGTGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: MGGCKLLSLICFRKSLPAHEWPV*RYSAGG
Trigger: TCCCCCTGCACTATATCTGCAAACTGGCCACTCATG...GGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACCACCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTCATGAGTGGCCAGTTTaGAGATATAGTGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: SKVFMLLYKSGMGGCKLLHEWPV*RYSAGG
Trigger: TCCCCCTGCACTATATCTGCAAACTGGCCACTCATG...AAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp CAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTCGTGCCAGAGGTAGTTaGCACTCCTCTCATGAAAGA +
Preference number: 4 (lower is better)
Translates to: QRFSCCFTNPEWVVVSYFRARGS*HSSHER
Trigger: TCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACG...AAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp GTAACTCTGGCCTGTCAAAAGCTCCTGGATAACGACCAAACTGTAACTTTCGGAACTTCTTCTACAAAGTaGATTGGATCCTTTGGAATG +
Preference number: 4 (lower is better)
Translates to: VTLACQKLLDNDQTVTFGTSSTK*IGSFGM
Trigger: CATTCCAAAGGATCCAATGCACTTTGTAGAAGAAGT...TCCGAAAGTTACAGTTTGGTCGTTATCCAGGAGCTTTTGACAGGCCAGAGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR GCA 90 bp ATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCGTACTGCTGAAAGAATaGTCGAGCTTCTTTATACCT +
Preference number: 4 (lower is better)
Translates to: MYSRVSQGTWTFMSTNSVVLLKE*SSFFIP
Trigger: AGGTATAAAGAAGCTCGAGCATTCTTTCAGCAGTAC...GACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000674563.1
ENST00000675736.1
CDS-3UTR GCA 90 bp CTTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGTTTTCGCTGCTAGTTaGAGTAATTCCTTTGCACTC +
Preference number: 4 (lower is better)
Translates to: LSEGNKFPVNVFFKSQVAVFAAS*SNSFAL
Trigger: GAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAAC...GGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCCCTTCCGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR GCA 90 bp TTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGGTTTTCGCTGCTAGTTaGAGTAATTCCTTTGCACTC +
Preference number: 4 (lower is better)
Translates to: FRKGTNFLSMCSLSLKWPVFAAS*SNSFAL
Trigger: GAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAAC...CGGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCCCTTCCGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR GCA 90 bp AAAAGAAGTAGGTATTTGTCTCATTCATCTAGGCTTCTCCACTGTAACCTAGCACTAGACAAGTTCCACTaGTCAGCCAGAATGGTACTC +
Preference number: 4 (lower is better)
Translates to: KRSRYLSHSSRLLHCNLALDKFH*SARMVL
Trigger: GAGTACCATTCTGGCTGAGCAGTGGAACTTGTCTAG...TGCTAGGTTACAGTGGAGAAGCCTAGATGAATGAGACAAATACCTACTTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675736.1
CDS-3UTR GCA 90 bp GATATAAGATTCAGCTTCCTTTCCATAGTTGGCTTCAATGTATTCGAGGGTTTCCTGTTTTGGCCTGAGTaGCTCCATTCCACATGTGAT +
Preference number: 4 (lower is better)
Translates to: DIRFSFLSIVGFNVFEGFLFWPE*LHSTCD
Trigger: ATCACATGTGGAATGGAGGCACTCAGGCCAAAACAG...GAAACCCTCGAATACATTGAAGCCAACTATGGAAAGGAAGCTGAATCTTATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
CDS-3UTR GCA 90 bp ATCTTAAAAGTAGCACTAACATACCAGCTTAAATGCCCAGAAGAGGAGTGGGTTAGAAGTCTGAGTTCTTaGCCCATCGACATTCAACAG +
Preference number: 4 (lower is better)
Translates to: ILKVALTYQLKCPEEEWVRSLSS*PIDIQQ
Trigger: CTGTTGAATGTCGATGGGGCAAGAACTCAGACTTCT...AACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGTTAGTGCTACTTTTAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp GCCTCCTTTAAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTAGAAGTCTGAGTTCTTaGCCCATCGACATTCAACAG +
Preference number: 4 (lower is better)
Translates to: ASFKHRTYTKGIAIELVCRSLSS*PIDIQQ
Trigger: CTGTTGAATGTCGATGGGGCAAGAACTCAGACTTCT...ACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTTAAAGGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR GCA 90 bp GACCTCTCTGTCGCCTTAGGTTCTCAATCTGAACAAAAAGATACTAAGCGGCAGCAAAGGTTTTCATGTTaGTTTACAAATCCGGAATGG +
Preference number: 4 (lower is better)
Translates to: DLSVALGSQSEQKDTKRQQRFSC*FTNPEW
Trigger: CCATTCCGGATTTGTAAAGCAACATGAAAACCTTTG...CTGCCGCTTAGTATCTTTTTGTTCAGATTGAGAACCTAAGGCGACAGAGAGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp CTCTCAGGATGTCTCTGGAGACATTCATGGGTGCCTAACTACCAACAAGTTGTCTTTAGAATTTGGGAATaGACTCTATGGGCTGATTTT +
Preference number: 4 (lower is better)
Translates to: LSGCLWRHSWVPNYQQVVFRIWE*TLWADF
Trigger: AAAATCAGCCCATAGAGTGCATTCCCAAATTCTAAA...GACAACTTGTTGGTAGTTAGGCACCCATGAATGTCTCCAGAGACATCCTGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGGGAGACATTCATGGGTaGCTAACTACCAACAAGTTG +
Preference number: 4 (lower is better)
Translates to: FPFLRLLLFSGVRGKSAKGDIHG*LTTNKL
Trigger: CAACTTGTTGGTAGTTAGGCACCCATGAATGTCTCC...CTTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp GTCTATGTAGGGAAGAATATAGAACCTGTGTCAATTGGGCCAAGATGTCTTGGACACCCTGCTGATTCTTaGCTAGTTGAGATAGAAACA +
Preference number: 4 (lower is better)
Translates to: VYVGKNIEPVSIGPRCLGHPADS*LVEIET
Trigger: TGTTTCTATCTCAACTAGGCAAGAATCAGCAGGGTG...TCCAAGACATCTTGGCCCAATTGACACAGGTTCTATATTCTTCCCTACATAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR GCA 90 bp GTTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAACTTAAAATGGCATCATaGACCCTGCTGATTCTTGCC +
Preference number: 4 (lower is better)
Translates to: VSILETTIVLWCQRKICQLKMAS*TLLILA
Trigger: GGCAAGAATCAGCAGGGTGCATGATGCCATTTTAAG...TTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR GCA 90 bp TGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCCTTAAAATGGCATCATaGACCCTGCTGATTCTTGCC +
Preference number: 4 (lower is better)
Translates to: CSSFFIPTLNKPRVWYFFLKMAS*TLLILA
Trigger: GGCAAGAATCAGCAGGGTGCATGATGCCATTTTAAG...GAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000642952.1
CDS-3UTR GCA 90 bp CACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATGAAACAGGTGTGAGCCACTaGACCCAAAAGAAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: HRTYTKGIAIELVCFTYETGVSH*TQKKQG
Trigger: TCCCTGCTTCTTTTGGGTGCAGTGGCTCACACCTGT...TTCATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
ENST00000644273.1
ENST00000675695.1
CDS-3UTR GCA 90 bp GTCCAGCACAGTGTAAACTTCGGAAACAGGTATCTGTCTTATCCTATCAAGTTGCTTAGCTTCTCAAACTaGTGGTATTACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: VQHSVNFGNRYLSYPIKLLSFSN*WYYRCE
Trigger: CTCACACCTGTAATACCAGCAGTTTGAGAAGCTAAG...CAACTTGATAGGATAAGACAGATACCTGTTTCCGAAGTTTACACTGTGCTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644273.1
CDS-3UTR GCA 90 bp TGTGGTAAGCTGCTCTTCAACTTTTTGCTTGCGTACCGTGGAAGTAAAGACTTTTACATACCCACTGTGTaGTATCAAATCCAATTCGGC +
Preference number: 4 (lower is better)
Translates to: CGKLLFNFLLAYRGSKDFYIPTV*YQIQFG
Trigger: GCCGAATTGGATTTGATAGCACACAGTGGGTATGTA...AAAGTCTTTACTTCCACGGTACGCAAGCAAAAAGTTGAAGAGCAGCTTACCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674767.1
CDS-3UTR CCA 90 bp GCTTTTCCCTTGTTTATGAGGTCACATGCCAGAAATTTGCTTTTTCTGCTAAGCAGTGGATCGCATGAGTaGCCAGTTTGCAGATATAGT +
Preference number: 4 (lower is better)
Translates to: AFPLFMRSHARNLLFLLSSGSHE*PVCRYS
Trigger: ACTATATCTGCAAACTGGCCACTCATGCGATCCACT...GCTTAGCAGAAAAAGCAAATTTCTGGCATGTGACCTCATAAACAAGGGAAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR CCA 90 bp GTTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAAGTGGATCGCATGAGTaGCCAGTTTGCAGATATAGT +
Preference number: 4 (lower is better)
Translates to: VSILETTIVLWCQRKICQSGSHE*PVCRYS
Trigger: ACTATATCTGCAAACTGGCCACTCATGCGATCCACT...TTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp AGGAGAGCTTTTCCCTTGTTTATGAGGTCACATGCCAGAAATTTGCTTTTTCTGGTGCATTGGATCCTTTaGAATGAGAACTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: RRAFPLFMRSHARNLLFLVHWIL*NENFQS
Trigger: GGACTGGAAGTTCTCATTCCAAAGGATCCAATGCAC...CAGAAAAAGCAAATTTCTGGCATGTGACCTCATAAACAAGGGAAAAGCTCTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR CCA 90 bp AAAGTAGCACTAACATACCAGCTTAAATGCCCAGAAGAGGAGTGGGTTATTCTTGTGCATTGGATCCTTTaGAATGAGAACTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: KVALTYQLKCPEEEWVILVHWIL*NENFQS
Trigger: GGACTGGAAGTTCTCATTCCAAAGGATCCAATGCAC...AAGAATAACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGTTAGTGCTACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp CTGGATAACGACCAAACTGTAACTTTCGGAAGGGAACAAATTTCCTGTCAATGTGTGCATTGGATCCTTTaGAATGAGAACTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: LDNDQTVTFGREQISCQCVHWIL*NENFQS
Trigger: GGACTGGAAGTTCTCATTCCAAAGGATCCAATGCAC...ACATTGACAGGAAATTTGTTCCCTTCCGAAAGTTACAGTTTGGTCGTTATCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CCA 90 bp AATTCCTTTGCACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTTCTACAAAGTGCATTaGATCCTTTGGAATGAGAAC +
Preference number: 4 (lower is better)
Translates to: NSFALFRKATASTVLSSRFYKVH*ILWNEN
Trigger: GTTCTCATTCCAAAGGATCCAATGCACTTTGTAGAA...CCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTGCAAAGGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR CCA 90 bp AGGAATTATAATACAAGTGCAAGGGTGGAGGAGAGGGCAGCCCAGACAAATACATTCTACAAAGTGCATTaGATCCTTTGGAATGAGAAC +
Preference number: 4 (lower is better)
Translates to: RNYNTSARVEERAAQTNTFYKVH*ILWNEN
Trigger: GTTCTCATTCCAAAGGATCCAATGCACTTTGTAGAA...TGTATTTGTCTGGGCTGCCCTCTCCTCCACCCTTGCACTTGTATTATAATTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR CCA 90 bp ACTCCTCTCATGAAAGACTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATAATAAACCTAGAGTGTaGTACTTCTTCTACAAAGTG +
Preference number: 4 (lower is better)
Translates to: TPLMKDYQVDRMSGQFADNKPRV*YFFYKV
Trigger: CACTTTGTAGAAGAAGTACCACACTCTAGGTTTATT...ATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTCTTTCATGAGAGGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CCA 90 bp GGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACAGTGTAATAAACCTAGAGTGTaGTACTTCTTCTACAAAGTG +
Preference number: 4 (lower is better)
Translates to: GFTGYMDLHVYKLSPAQCNKPRV*YFFYKV
Trigger: CACTTTGTAGAAGAAGTACCACACTCTAGGTTTATT...ACACTGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TTTGCACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTGCAATAAACCTAGAGTGTaGTACTTCTTCTACAAAGTG +
Preference number: 4 (lower is better)
Translates to: FALFRKATASTVLSSRYCNKPRV*YFFYKV
Trigger: CACTTTGTAGAAGAAGTACCACACTCTAGGTTTATT...GCAGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR CCA 90 bp TTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTCCATTCACATCATCTTTTCCCTaGAAGGATAGTTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: LFSKKSTSPFPQTFRFPFTSSFP*KDSSKL
Trigger: CAGCTTGGAACTATCCTTCCAGGGAAAAGATGATGT...GAATGGAAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp CTCCTGGATAACGACCAAACTGTAACTTTCGGAAGGGAACAAATTTCCTGTCAAACATCATCTTTTCCCTaGAAGGATAGTTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: LLDNDQTVTFGREQISCQTSSFP*KDSSKL
Trigger: CAGCTTGGAACTATCCTTCCAGGGAAAAGATGATGT...TTGACAGGAAATTTGTTCCCTTCCGAAAGTTACAGTTTGGTCGTTATCCAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR CCA 90 bp GCACTAACATACCAGCTTAAATGCCCAGAAGAGGAGTGGGTTATTCTTTTCAACAGGTCTTACCATAGTTaGCTTCAATGTATTCGAGGG +
Preference number: 4 (lower is better)
Translates to: ALTYQLKCPEEEWVILFNRSYHS*LQCIRG
Trigger: CCCTCGAATACATTGAAGCCAACTATGGTAAGACCT...GTTGAAAAGAATAACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGTTAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TGTCCCACCAAGCAGCTACTCTTAGGGATGCTCAATTTTAGGAACTATGGTTTTAGGTCTTACCATAGTTaGCTTCAATGTATTCGAGGG +
Preference number: 4 (lower is better)
Translates to: CPTKQLLLGMLNFRNYGFRSYHS*LQCIRG
Trigger: CCCTCGAATACATTGAAGCCAACTATGGTAAGACCT...AAAACCATAGTTCCTAAAATTGAGCATCCCTAAGAGTAGCTGCTTGGTGGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TCCGGAATGGGTGGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACATTGGGTTGCACATTaGGAGGAGAGCGCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: SGMGGCKLLSLICFRKSLHWVAH*EESASS
Trigger: ACTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATG...TAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACCACCCATTCCGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp CCAGAAACCACTCATGTTATTTATGAAAGACCCAATAATTCTGCATTGAGAATGCATTGGGTTGCACATTaGGAGGAGAGCGCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: PETTHVIYERPNNSALRMHWVAH*EESASS
Trigger: ACTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATG...CATTCTCAATGCAGAATTATTGGGTCTTTCATAAATAACATGAGTGGTTTCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGTGCCAGAGGCTATCTCAATATAACTaGATAACCTCATCCCACTCA +
Preference number: 4 (lower is better)
Translates to: GTNFLSMCSLSLKWPCQRLSQYN*ITSSHS
Trigger: TGAGTGGGATGAGGTTATCCAGTTATATTGAGATAG...CCTCTGGCACGGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
CDS-3UTR CCA 90 bp GTTGGGTTAGAAGGTGCCAGGGGGTATTCTAGGGTAGAAGTTTTGATAGTACGGTCATGTCTAGTAACATaGTCTCACTTGAATGATTTG +
Preference number: 4 (lower is better)
Translates to: VGLEGARGYSRVEVLIVRSCLVT*SHLNDL
Trigger: CAAATCATTCAAGTGAGACCATGTTACTAGACATGA...CCGTACTATCAAAACTTCTACCCTAGAATACCCCCTGGCACCTTCTAACCCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000675695.1
CDS-3UTR CCA 90 bp GGAGACATTCATGGGTGCCTAACTACCAACAAGTTGTCAACTTCCCCAGGTAAGTCATGTCTAGTAACATaGTCTCACTTGAATGATTTG +
Preference number: 4 (lower is better)
Translates to: GDIHGCLTTNKLSTSPGKSCLVT*SHLNDL
Trigger: CAAATCATTCAAGTGAGACCATGTTACTAGACATGA...CTTACCTGGGGAAGTTGACAACTTGTTGGTAGTTAGGCACCCATGAATGTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp CCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGCTCAACAGACTGAAAAACTaGGGAGGGACACAAACTTTA +
Preference number: 4 (lower is better)
Translates to: PFLRLLLFSGVRGKSAKLNRLKN*GGTQTL
Trigger: TAAAGTTTGTGTCCCTCCCCAGTTTTTCAGTCTGTT...GAGCTTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAAACAGACTGAAAAACTaGGGAGGGACACAAACTTTA +
Preference number: 4 (lower is better)
Translates to: WLQCIRGFHRVHGPSCLQNRLKN*GGTQTL
Trigger: TAAAGTTTGTGTCCCTCCCCAGTTTTTCAGTCTGTT...TTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp CCTCAGACATTCAGGTTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGATATAAGAGAGAGATaGGGTAAACAGCATCCTAGC +
Preference number: 4 (lower is better)
Translates to: PQTFRFPFLRLLLFSGVRDIRER*GKQHPS
Trigger: GCTAGGATGCTGTTTACCCCATCTCTCTCTTATATC...TCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAACCTGAATGTCTGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp CTTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGATATAAGAGAGAGATaGGGTAAACAGCATCCTAGC +
Preference number: 4 (lower is better)
Translates to: LSEGNKFPVNVFFKSQVADIRER*GKQHPS
Trigger: GCTAGGATGCTGTTTACCCCATCTCTCTCTTATATC...GGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCCCTTCCGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR CCA 90 bp ACTCCTCTCATGAAAGACTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATTTTACAAATCCGGAATaGGTGGTTGTAAGTTACTTT +
Preference number: 4 (lower is better)
Translates to: TPLMKDYQVDRMSGQFADFTNPE*VVVSYF
Trigger: AAAGTAACTTACAACCACCCATTCCGGATTTGTAAA...ATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTCTTTCATGAGAGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000642537.1
ENST00000645933.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GTTCCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTAGGACAGAAGACTGTTaGTTATCATTTATCAAAGGT +
Preference number: 4 (lower is better)
Translates to: VPESESIPSSRGSLLSIFRTEDC*LSFIKG
Trigger: ACCTTTGATAAATGATAACCAACAGTCTTCTGTCCT...AAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR CCA 90 bp CCAGCACAGTGTAAACTTCGGAAACAGGTATCTTTCAAACTTCTGGCTTCTACCCAGCTATTTAGAATTTaGGAATGCACTCTATGGGCT +
Preference number: 4 (lower is better)
Translates to: PAQCKLRKQVSFKLLASTQLFRI*ECTLWA
Trigger: AGCCCATAGAGTGCATTCCCAAATTCTAAATAGCTG...GGTAGAAGCCAGAAGTTTGAAAGATACCTGTTTCCGAAGTTTACACTGTGCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp AGTCCCACGTCTTTACAGGAATCTTCCAGGTCTTACCATAGTTGGCTTCAATGTCCTCATCAAGTAGGGTaGATTTTGCCCAAAAATAGT +
Preference number: 4 (lower is better)
Translates to: SPTSLQESSRSYHSWLQCPHQVG*ILPKNS
Trigger: ACTATTTTTGGGCAAAATCCACCCTACTTGATGAGG...ACATTGAAGCCAACTATGGTAAGACCTGGAAGATTCCTGTAAAGACGTGGGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp AAAAGAAGTAGGTATTTGTCTCATTCATCTAGGCTTCTCCACTGTAACCTAGCACTGAGCACAAGCAAATaGTCCTCATCAAGTAGGGTG +
Preference number: 4 (lower is better)
Translates to: KRSRYLSHSSRLLHCNLALSTSK*SSSSRV
Trigger: CACCCTACTTGATGAGGACCATTTGCTTGTGCTCAG...TGCTAGGTTACAGTGGAGAAGCCTAGATGAATGAGACAAATACCTACTTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GCCAGAATGGTACTCCCAATTTGTTTAATGTTTTCGCTGCTAGTTGCAGTAATTATGGGTAAGATCTCCTaGCAAAGAATGGGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: ARMVLPICLMFSLLVAVIMGKIS*QRMGVP
Trigger: TGGGACTCCCATTCTTTGCCAGGAGATCTTACCCAT...AATTACTGCAACTAGCAGCGAAAACATTAAACAAATTGGGAGTACCATTCTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TCCTTTAAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCGAGTCACGGCAGTCTTaGGTTTTAGCCTCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: SFKHRTYTKGIAIELVCFESRQS*VLASAV
Trigger: AACAGCTGAGGCTAAAACCCAAGACTGCCGTGACTC...GAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTTAAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR CCA 90 bp AGCAAACTAGGTAGCATATGGGATAATATTAGGAGACAACTGCTTAACCAAGAAGAGTCACGGCAGTCTTaGGTTTTAGCCTCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: SKLGSIWDNIRRQLLNQEESRQS*VLASAV
Trigger: AACAGCTGAGGCTAAAACCCAAGACTGCCGTGACTC...TTCTTGGTTAAGCAGTTGTCTCCTAATATTATCCCATATGCTACCTAGTTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GGGAGTCCCAATTGGAAATGGGGAGAAATGTGGAGTGTATGCATTTCTAAATACTTACCTGTTAGAAGGTaGGAATGTGGCACTTTCTTG +
Preference number: 4 (lower is better)
Translates to: GSPNWKWGEMWSVCISKYLPVRR*ECGTFL
Trigger: CAAGAAAGTGCCACATTCCCACCTTCTAACAGGTAA...GTATTTAGAAATGCATACACTCCACATTTCTCCCCATTTCCAATTGGGACTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp CAGGTACCAAATCTAGTGAAGTACAGTAAACTGCTTGGGACCAGCAAACTAGGTTTTGTAGTTATGAAGTaGGAGGGACACACAAATAGC +
Preference number: 4 (lower is better)
Translates to: QVPNLVKYSKLLGTSKLGFVVMK*EGHTNS
Trigger: GCTATTTGTGTGTCCCTCCCACTTCATAACTACAAA...ACCTAGTTTGCTGGTCCCAAGCAGTTTACTGTACTTCACTAGATTTGGTACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000675695.1
CDS-3UTR CCA 90 bp CAGGAATCTTCCAGGTCTTACCATAGTTGGCTTCAATGTATTCGAGGGTTTCACTTTGTAGTTATGAAGTaGGAGGGACACACAAATAGC +
Preference number: 4 (lower is better)
Translates to: QESSRSYHSWLQCIRGFHFVVMK*EGHTNS
Trigger: GCTATTTGTGTGTCCCTCCCACTTCATAACTACAAA...GTGAAACCCTCGAATACATTGAAGCCAACTATGGTAAGACCTGGAAGATTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675695.1
CDS-3UTR CCA 90 bp TCTGATGTGAAGCAGCTTAAAATGGCATCATGCACCCTGCTGATTCTTGCCATATACCTTTCAAACTTCTaGCTTCTACCCATACCAGTT +
Preference number: 4 (lower is better)
Translates to: SDVKQLKMASCTLLILAIYLSNF*LLPIPV
Trigger: AACTGGTATGGGTAGAAGCCAGAAGTTTGAAAGGTA...TATGGCAAGAATCAGCAGGGTGCATGATGCCATTTTAAGCTGCTTCACATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642952.1
ENST00000644273.1
CDS-3UTR CCA 90 bp AGGAATTATAATACAAGTGCAAGGGTGGAGGAGAGGGCAGCCCAGACAAATACACTGGAAAAGGGTTCATaGTCATTTGAACAGAAATTC +
Preference number: 4 (lower is better)
Translates to: RNYNTSARVEERAAQTNTLEKGS*SFEQKF
Trigger: GAATTTCTGTTCAAATGACCATGAACCCTTTTCCAG...TGTATTTGTCTGGGCTGCCCTCTCCTCCACCCTTGCACTTGTATTATAATTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR CCA 90 bp TTCTTTAAGTCTCAAGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAATTTTCTAAATCTACATaGTCCATCTTCTATAGTGGC +
Preference number: 4 (lower is better)
Translates to: FFKSQVAVPEVVATPLMKFSKST*SIFYSG
Trigger: GCCACTATAGAAGATGGACCATGTAGATTTAGAAAA...TTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCCACTTGAGACTTAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CCA 90 bp ATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCTACAAAGTGCATTGGTGGACACAGCTTTCTTaGCAGGGAACCCCAGAAAAT +
Preference number: 4 (lower is better)
Translates to: IPTLNKPRVWYFFYKVHWWTQLS*QGTPEN
Trigger: ATTTTCTGGGGTTCCCTGCCAAGAAAGCTGTGTCCA...CCAATGCACTTTGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CCA 90 bp GTCTCTAACCTGAAAGAATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTTTTTCGTATCCCTCGTaGACACAGCTTTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: VSNLKECSSFFIPTLNKPFSYPS*TQLSWQ
Trigger: CTGCCAAGAAAGCTGTGTCCACGAGGGATACGAAAA...AGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTCTTTCAGGTTAGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CCA 90 bp TCCCTTAGGACAGGAAGAGCGGTCAAGTTTAAGCACAAAACTCCATCTCTTCTACAGATTTGTGGGTCTTaGGCACTTGACAGTTATATA +
Preference number: 4 (lower is better)
Translates to: SLRTGRAVKFKHKTPSLLQICGS*ALDSYI
Trigger: TATATAACTGTCAAGTGCCCAAGACCCACAAATCTG...TAGAAGAGATGGAGTTTTGTGCTTAAACTTGACCGCTCTTCCTGTCCTAAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CCA 90 bp CCATATTCTCAGCTATCCGAAACCAGCCTTCCTCATTCTTCCATAGGTGATACTCAGATTTGTGGGTCTTaGGCACTTGACAGTTATATA +
Preference number: 4 (lower is better)
Translates to: PYSQLSETSLPHSSIGDTQICGS*ALDSYI
Trigger: TATATAACTGTCAAGTGCCCAAGACCCACAAATCTG...AGTATCACCTATGGAAGAATGAGGAAGGCTGGTTTCGGATAGCTGAGAATATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676192.1
3UTR CAA 72 bp ACAAGGAGGAAAGAGGGAACGTTGCTGGGATTTTTCTaGAGAAATTCTCTTGACTGGTCAGTAACTGAAGTT +
Preference number: 4 (lower is better)
Translates to: TRRKEGTLLGFF*RNSLDWSVTEV
Trigger: AACTTCAGTTACTGACCAGTCAAGAGAATTTCTCAAGAAAAATCCCAGCAACGTTCCCTCTTTCCTCCTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
3UTR CAA 72 bp TTAGAAGGTGCCAGGGGGTATTCTAGGGTAGAAGTTTaGATAGTACGGAAGCAGAGATTTCTTTCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: LEGARGYSRVEV*IVRKQRFLSFL
Trigger: AAGGAAAGAAAGAAATCTCTGCTTCCGTACTATCAAAACTTCTACCCTAGAATACCCCCTGGCACCTTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642952.1
ENST00000644273.1
ENST00000675695.1
3UTR CAA 72 bp ACTGCACGTGAATGTGGTAAGCTGCTCTTCAACTTTTaGCTTGCGTACCGTGGAAGTAAAGACTTTGAAAAA +
Preference number: 4 (lower is better)
Translates to: TARECGKLLFNF*LAYRGSKDFEK
Trigger: TTTTTCAAAGTCTTTACTTCCACGGTACGCAAGCAAAAAGTTGAAGAGCAGCTTACCACATTCACGTGCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374705.5
CDS-3UTR TCA 90 bp TGTAGGGAAGAATATAGAACCTGTGTCAATTGGGCCAAGATGTCTTGGATTTCAGCTTCCTTTGGATTTTaGCAAACCAGCTCCATTCTT +
Preference number: 4 (lower is better)
Translates to: CREEYRTCVNWAKMSWISASFGF*QTSSIL
Trigger: AAGAATGGAGCTGGTTTGTCAAAATCCAAAGGAAGC...TGAAATCCAAGACATCTTGGCCCAATTGACACAGGTTCTATATTCTTCCCTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GCCTCCTTTAAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTGCTTCCTTTGGATTTTaGCAAACCAGCTCCATTCTT +
Preference number: 4 (lower is better)
Translates to: ASFKHRTYTKGIAIELVCASFGF*QTSSIL
Trigger: AAGAATGGAGCTGGTTTGTCAAAATCCAAAGGAAGC...ACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTTAAAGGAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000675695.1
CDS-3UTR TCA 90 bp TGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCGCTTCCTTTGGATTTTaGCAAACCAGCTCCATTCTT +
Preference number: 4 (lower is better)
Translates to: CSSFFIPTLNKPRVWYFFASFGF*QTSSIL
Trigger: AAGAATGGAGCTGGTTTGTCAAAATCCAAAGGAAGC...GAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR TCA 90 bp GCTTTTCCCTTGTTTATGAGGTCACATGCCAGAAATTTGCTTTTTCTGCTAAGCTCATTCTTCCATAGGTaGTACTGCAGTGCAAATGCA +
Preference number: 4 (lower is better)
Translates to: AFPLFMRSHARNLLFLLSSFFHR*YCSANA
Trigger: TGCATTTGCACTGCAGTATCACCTATGGAAGAATGA...GCTTAGCAGAAAAAGCAAATTTCTGGCATGTGACCTCATAAACAAGGGAAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR TCA 90 bp CCTCAGACATTCAGGTTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGATCAATCTTTAGGCACTaGAATCCCATATTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PQTFRFPFLRLLLFSGVRSIFRH*NPIFSA
Trigger: AGCTGAGAATATGGGATTTCAGTGCCTAAAGATTGA...TCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAACCTGAATGTCTGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CCACGTCTTTACAGGAATCTTCCAGGTCTTACCATAGTTGGCTTCAATGTATTCTCAATCTTTAGGCACTaGAATCCCATATTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PRLYRNLPGLTIVGFNVFSIFRH*NPIFSA
Trigger: AGCTGAGAATATGGGATTTCAGTGCCTAAAGATTGA...GAATACATTGAAGCCAACTATGGTAAGACCTGGAAGATTCCTGTAAAGACGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CTTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCTCAATCTTTAGGCACTaGAATCCCATATTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LSEGNKFPVNVFFKSQVASIFRH*NPIFSA
Trigger: AGCTGAGAATATGGGATTTCAGTGCCTAAAGATTGA...GGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCCCTTCCGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR TCA 90 bp TGTCCCACCAAGCAGCTACTCTTAGGGATGCTCAATTTTAGGAACTATGGTTTTTCAATCTTTAGGCACTaGAATCCCATATTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: CPTKQLLLGMLNFRNYGFSIFRH*NPIFSA
Trigger: AGCTGAGAATATGGGATTTCAGTGCCTAAAGATTGA...AAAACCATAGTTCCTAAAATTGAGCATCCCTAAGAGTAGCTGCTTGGTGGGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATGAAACCAAGTGGATCGCATaGGTGGCCAGTTTGCAGATA +
Preference number: 4 (lower is better)
Translates to: HRTYTKGIAIELVCFTYETKWIA*VASLQI
Trigger: TATCTGCAAACTGGCCACTCATGCGATCCACTTGGT...TTCATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
ENST00000675695.1
CDS-3UTR TCA 90 bp TGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCTTGCCACTCCTCTCATaGAAGACTACCAAGTGGATC +
Preference number: 4 (lower is better)
Translates to: CKLLSLICFRKSLPAHSLLPLLS*KTTKWI
Trigger: GATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAA...GAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp TTATATAGGAGCTTGTTAATGGGTCCCTACAAAATCTCTGTATTAGGTTGGGTTTTGCCACTCCTCTCATaGAAGACTACCAAGTGGATC +
Preference number: 4 (lower is better)
Translates to: LYRSLLMGPYKISVLGWVLPLLS*KTTKWI
Trigger: GATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAA...AACCCAACCTAATACAGAGATTTTGTAGGGACCCATTAACAAGCTCCTATATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000642952.1
ENST00000675695.1
CDS-3UTR TCA 90 bp TCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCTACAAAGTGCTTGCCACTCCTCTCATaGAAGACTACCAAGTGGATC +
Preference number: 4 (lower is better)
Translates to: SLYLHSINLECGTSSTKCLPLLS*KTTKWI
Trigger: GATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAA...GCACTTTGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR TCA 90 bp GTTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAATTGGATCCTTTGGAATaGGAACTTCCAGTCCATCAA +
Preference number: 4 (lower is better)
Translates to: VSILETTIVLWCQRKICQLDPLE*ELPVHQ
Trigger: TTGATGGACTGGAAGTTCTCATTCCAAAGGATCCAA...TTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp AAGGAGAGCTTTTCCCTTGTTTATGAGGTCACATGCCAGAAATTTGCTTTTTCTTCATCAAGGTACTGCTaGAAGAATGCTCGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: KESFSLVYEVTCQKFAFSSSRYC*KNARAS
Trigger: AGAAGCTCGAGCATTCTTTCAGCAGTACCTTGATGA...AGAAAAAGCAAATTTCTGGCATGTGACCTCATAAACAAGGGAAAAGCTCTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR TCA 90 bp AAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTCTTCCCAAATTTGTGTTTaGGCGGAAGTCCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: KVFMLLYKSGMGGCKLLSSQICV*AEVLHP
Trigger: AGGATGCAGGACTTCCGCTCAAACACAAATTTGGGA...AGAAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000457847.1
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675736.1
CDS-3UTR TCA 90 bp TCCTTTAAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCTCCCAAATTTGTGTTTaGGCGGAAGTCCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: SFKHRTYTKGIAIELVCFSQICV*AEVLHP
Trigger: AGGATGCAGGACTTCCGCTCAAACACAAATTTGGGA...GAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTTAAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
CDS-3UTR TCA 90 bp CAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTTCCCAAATTTGTGTTTaGGCGGAAGTCCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: QRFSCCFTNPEWVVVSYFSQICV*AEVLHP
Trigger: AGGATGCAGGACTTCCGCTCAAACACAAATTTGGGA...AAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000457847.1
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675736.1
CDS-3UTR TCA 90 bp ATAGTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCGAGAATTACATCAGATaGCTCTTTCTGTGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: IVGFNVFEGFTGYMDLHVENYIR*LFLCLQ
Trigger: TTGAAGACACAGAAAGAGTCATCTGATGTAATTCTC...GACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCAACTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp ATCAGCTGTCCCACCAAGCAGCTACTCTTAGGGATGCTCAATTTTAGGAACTATATTGTATGTGGCACATaGAAATTCCTCAGTACTAAG +
Preference number: 4 (lower is better)
Translates to: ISCPTKQLLLGMLNFRNYIVCGT*KFLSTK
Trigger: CTTAGTACTGAGGAATTTTCATGTGCCACATACAAT...ATAGTTCCTAAAATTGAGCATCCCTAAGAGTAGCTGCTTGGTGGGACAGCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp AGCAAACTAGGTAGCATATGGGATAATATTAGGAGACAACTGCTTAACCAAGAAAACCTGTACAGAACTTaGACTCTTCAAAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SKLGSIWDNIRRQLLNQENLYRT*TLQRVG
Trigger: CCCCACCCTTTGAAGAGTTCAAGTTCTGTACAGGTT...TTCTTGGTTAAGCAGTTGTCTCCTAATATTATCCCATATGCTACCTAGTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp TTATATAGGAGCTTGTTAATGGGTCCCTACAAAATCTCTGTATTAGGTTGGGTTCTTAGCTTTGCCTGGTaGGCTCATCTTCCAGTTCAA +
Preference number: 4 (lower is better)
Translates to: LYRSLLMGPYKISVLGWVLSFAW*AHLPVQ
Trigger: TTGAACTGGAAGATGAGCTCACCAGGCAAAGCTAAG...AACCCAACCTAATACAGAGATTTTGTAGGGACCCATTAACAAGCTCCTATATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000675695.1
CDS-3UTR TCA 90 bp ACTTCCCCAGGTAAGCCAGGTAAACTAAACCTGAAAGTGGTCAGATTAGGAGAACAAAGTCTGATCACTTaGATATTAACTCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: TSPGKPGKLNLKVVRLGEQSLIT*ILTQTP
Trigger: TGGAGTCTGAGTTAATATTCAAGTGATCAGACTTTG...TTCTCCTAATCTGACCACTTTCAGGTTTAGTTTACCTGGCTTACCTGGGGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp TTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGACAAACTCTATGATCTaGGGTAGGGTGAATAGTTGT +
Preference number: 4 (lower is better)
Translates to: FRKGTNFLSMCSLSLKWPTNSMI*GRVNSC
Trigger: ACAACTATTCACCCTACCTCAGATCATAGAGTTTGT...CGGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCCCTTCCGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR TCA 90 bp AGCAAACTAGGTAGCATATGGGATAATATTAGGAGACAACTGCTTAACCAAGAAGGTAAAGTAGAAGTCTaGGTTCTTGCCCCATCGACA +
Preference number: 4 (lower is better)
Translates to: SKLGSIWDNIRRQLLNQEGKVEV*VLAPST
Trigger: TGTCGATGGGGCAAGAACTCAGACTTCTACTTTACC...TTCTTGGTTAAGCAGTTGTCTCCTAATATTATCCCATATGCTACCTAGTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTGGTAAAGTAGAAGTCTaGGTTCTTGCCCCATCGACA +
Preference number: 4 (lower is better)
Translates to: QRFSCCFTNPEWVVVSYFGKVEV*VLAPST
Trigger: TGTCGATGGGGCAAGAACTCAGACTTCTACTTTACC...AAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GCCTCCTTTAAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTCTGACTCAGACATCTTaGGGGGAAAAGGAAACTAAA +
Preference number: 4 (lower is better)
Translates to: ASFKHRTYTKGIAIELVCLTQTS*GEKETK
Trigger: TTTAGTTTCCTTTTCCCCTCAAGATGTCTGAGTCAG...ACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTTAAAGGAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR TCA 90 bp GGGAGTCCCAATTGGAAATGGGGAGAAATGTGGAGTGTATGCATTTCTAAATACATGCACTCTATGGGCTaGTTTTCTAGCAAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: GSPNWKWGEMWSVCISKYMHSMG*FSSKEK
Trigger: TTTCTCTTTGCTAGAAAATCAGCCCATAGAGTGCAT...GTATTTAGAAATGCATACACTCCACATTTCTCCCCATTTCCAATTGGGACTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CTGATGTCTCCAGATGTGAACTGTCTTATTGTCTGGAGAGAAGGCATTTTCCAGAAGATGAAGTATGGATaGATCAGAATCAGAGGTAAG +
Preference number: 4 (lower is better)
Translates to: LMSPDVNCLIVWREGIFQKMKYG*IRIRGK
Trigger: CTTACCTCTGATTCTGATTCATCCATACTTCATCTT...CTGGAAAATGCCTTCTCTCCAGACAATAAGACAGTTCACATCTGGAGACATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp AGGCCTGAGGCTAAGAACTGTATACTTCATTTAATCCCCCTAAAAACCCTTAGAGATCCAATGAGGTACTaGAGATGGATATACCTAACC +
Preference number: 4 (lower is better)
Translates to: RPEAKNCILHLIPLKTLRDPMRY*RWIYLT
Trigger: GGTTAGGTATATCCATCTTCAGTACCTCATTGGATC...TCTAAGGGTTTTTAGGGGGATTAAATGAAGTATACAGTTCTTAGCCTCAGGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GTCTATGTAGGGAAGAATATAGAACCTGTGTCAATTGGGCCAAGATGTCTTGGAGTGATGAAAGAAAAGTaGTCCAATGAGGTACTGAAG +
Preference number: 4 (lower is better)
Translates to: VYVGKNIEPVSIGPRCLGVMKEK*SNEVLK
Trigger: CTTCAGTACCTCATTGGATCACTTTTCTTTCATCAC...TCCAAGACATCTTGGCCCAATTGACACAGGTTCTATATTCTTCCCTACATAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GCACTAACATACCAGCTTAAATGCCCAGAAGAGGAGTGGGTTATTCTTTTCAACGTCAGATTAGGAGAATaGCTGCTAGAATACTCAAGT +
Preference number: 4 (lower is better)
Translates to: ALTYQLKCPEEEWVILFNVRLGE*LLEYSS
Trigger: ACTTGAGTATTCTAGCAGTCATTCTCCTAATCTGAC...GTTGAAAAGAATAACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGTTAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp AGGTCTTACCATAGTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGATTCCAGATAAAGGTATaGAGGTTGCCTAAGAATTCT +
Preference number: 4 (lower is better)
Translates to: RSYHSWLQCIRGFHRVHGFQIKV*RLPKNS
Trigger: AGAATTCTTAGGCAACCTTCATACCTTTATCTGGAA...TCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCAACTATGGTAAGACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp ATAGTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTTCCAGATAAAGGTATaGAGGTTGCCTAAGAATTCT +
Preference number: 4 (lower is better)
Translates to: IVGFNVFEGFTGYMDLHVFQIKV*RLPKNS
Trigger: AGAATTCTTAGGCAACCTTCATACCTTTATCTGGAA...GACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCAACTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGCTCTTCCAGATAAAGGTATaGAGGTTGCCTAAGAATTCT +
Preference number: 4 (lower is better)
Translates to: PFLRLLLFSGVRGKSAKLFQIKV*RLPKNS
Trigger: AGAATTCTTAGGCAACCTTCATACCTTTATCTGGAA...GAGCTTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTCTCTATTAGCAGGTTGGTGCTaGTGGTTCCCTTGGGAAATA +
Preference number: 4 (lower is better)
Translates to: VFMLLYKSGMGGCKLLSLLAGWC*WFPWEI
Trigger: TATTTCCCAAGGGAACCATCAGCACCAACCTGCTAA...TAGAGAAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp AAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTCTTTAGCAGGTTGGTGCTaGTGGTTCCCTTGGGAAATA +
Preference number: 4 (lower is better)
Translates to: KVFMLLYKSGMGGCKLLSLAGWC*WFPWEI
Trigger: TATTTCCCAAGGGAACCATCAGCACCAACCTGCTAA...AGAAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CCTCAGACATTCAGGTTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAAATGTGGCACTTTCTTaGCTAGGTTTTGAGGGAATA +
Preference number: 4 (lower is better)
Translates to: PQTFRFPFLRLLLFSGVRNVALS*LGFEGI
Trigger: TATTCCCTCAAAACCTAGTCAAGAAAGTGCCACATT...TCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAACCTGAATGTCTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp AAAAGAAGTAGGTATTTGTCTCATTCATCTAGGCTTCTCCACTGTAACCTAGCAATTGCCTTCCCTGAGTaGGATGTTAGAGGTGATCTA +
Preference number: 4 (lower is better)
Translates to: KRSRYLSHSSRLLHCNLAIAFPE*DVRGDL
Trigger: TAGATCACCTCTAACATCTCACTCAGGGAAGGCAAT...TGCTAGGTTACAGTGGAGAAGCCTAGATGAATGAGACAAATACCTACTTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GACTCCACAATCTTAAAAGTAGCACTAACATACCAGCTTAAATGCCCAGAAGAGGAAAGGCTAGAATATTaGAAAAGAAGTCCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: DSTILKVALTYQLKCPEEERLEY*KRSPGE
Trigger: CTCCCCTGGACTTCTTTTTCAATATTCTAGCCTTTC...CTCTTCTGGGCATTTAAGCTGGTATGTTAGTGCTACTTTTAAGATTGTGGAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GAATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCATAGCTCCTCTCAAATaGCACTTCTTCAAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: ECSSFFIPTLNKPRVWYFIAPLK*HFFKEV
Trigger: GACTTCCTTGAAGAAGTGTCATTTGAGAGGAGCTAT...GAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602661.6
ENST00000675736.1
CDS-3UTR TCA 90 bp AATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTACCTATGGGGAAGATaGAAACCTTCACACACTTCC +
Preference number: 4 (lower is better)
Translates to: NARASLYLHSINLECGTSYLWGR*KPSHTS
Trigger: GGAAGTGTGTGAAGGTTTTCATCTTCCCCATAGGTA...AGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642952.1
ENST00000645933.1
CDS-3UTR TCA 90 bp GTCCAGCACAGTGTAAACTTCGGAAACAGGTATCTGTCTTATCCTATCAAGTTGTCTACCCATACCAGTTaGTTCAAAATGGGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: VQHSVNFGNRYLSYPIKLSTHTS*FKMGRK
Trigger: TTTCCTTCCCATTTTGAATCAACTGGTATGGGTAGA...CAACTTGATAGGATAAGACAGATACCTGTTTCCGAAGTTTACACTGTGCTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642177.1
ENST00000642537.1
ENST00000644273.1
CDS-3UTR TCA 90 bp GGACTAAATAAGACATTGCATAAAGCACTTGGTAAAGGGCCTGTCCCTTACCTGAACCTTTTATCCAACTaGAGCTACTACGGCTTTAAA +
Preference number: 4 (lower is better)
Translates to: GLNKTLHKALGKGPVPYLNLLSN*SYYGFK
Trigger: TTTAAAGCCGTAGTAGCTTCAGTTGGATAAAAGGTT...CAGGTAAGGGACAGGCCCTTTACCAAGTGCTTTATGCAATGTCTTATTTAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674767.1
CDS-3UTR GCA 90 bp GAATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCCTCATTAGTCTGTGCTaGTCACTTGGTTGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: ECSSFFIPTLNKPRVWYFLISLC*SLGCLL
Trigger: CAAAAGACAACCAAGTGAGCAGCACAGACTAATGAG...GAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
CDS-3UTR GCA 90 bp AGATGTCTTGGATTTCAGACACTCTTAAGACTTTGTACTTCAGGAAAGGATAAACTGCACGCCACTGTGTaGTATCAAATCCAATTCGGC +
Preference number: 4 (lower is better)
Translates to: RCLGFQTLLRLCTSGKDKLHATV*YQIQFG
Trigger: GCCGAATTGGATTTGATAGCACACAGTGGCGTGCAG...TTTATCCTTTCCTGAAGTACAAAGTCTTAAGAGTGTCTGAAATCCAAGACATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp GGGAGTCCCAATTGGAAATGGGGAGAAATGTGGAGTGTATGCATTTCTAAATACATACTGCAGTGCAAATaGAGTAAAGTCTCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: GSPNWKWGEMWSVCISKYILQCK*SKVSWN
Trigger: GTTCCAAGAGACTTTACTGCATTTGCACTGCAGTAT...GTATTTAGAAATGCATACACTCCACATTTCTCCCCATTTCCAATTGGGACTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp AGGAATCTTCCAGGTCTTACCATAGTTGGCTTCAATGTATTCGAGGGTTTCACAATACTGCAGTGCAAATaGAGTAAAGTCTCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: RNLPGLTIVGFNVFEGFTILQCK*SKVSWN
Trigger: GTTCCAAGAGACTTTACTGCATTTGCACTGCAGTAT...TGTGAAACCCTCGAATACATTGAAGCCAACTATGGTAAGACCTGGAAGATTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TTATCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACATGAGTGGCCAGTTTaGAGATATAGTGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: LSKVFMLLYKSGMGGCKLHEWPV*RYSAGG
Trigger: TCCCCCTGCACTATATCTGCAAACTGGCCACTCATG...TAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp AAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATCATGAGTGGCCAGTTTaGAGATATAGTGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: KHRTYTKGIAIELVCFTYHEWPV*RYSAGG
Trigger: TCCCCCTGCACTATATCTGCAAACTGGCCACTCATG...ATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
ENST00000675695.1
CDS-3UTR GCA 90 bp CATTTCAACCTACTATCTCAATATAACTGGATAACCTCATCCCACTCAGAAATACGTGCCAGAGGTAGTTaGCACTCCTCTCATGAAAGA +
Preference number: 4 (lower is better)
Translates to: HFNLLSQYNWITSSHSEIRARGS*HSSHER
Trigger: TCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACG...TATTTCTGAGTGGGATGAGGTTATCCAGTTATATTGAGATAGTAGGTTGAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCTACAAAGTGCATTCGTGCCAGAGGTAGTTaGCACTCCTCTCATGAAAGA +
Preference number: 4 (lower is better)
Translates to: LYLHSINLECGTSSTKCIRARGS*HSSHER
Trigger: TCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACG...AATGCACTTTGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR GCA 90 bp CCAGAAACCACTCATGTTATTTATGAAAGACCCAATAATTCTGCATTGAGAATGCGTGCCAGAGGTAGTTaGCACTCCTCTCATGAAAGA +
Preference number: 4 (lower is better)
Translates to: PETTHVIYERPNNSALRMRARGS*HSSHER
Trigger: TCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACG...CATTCTCAATGCAGAATTATTGGGTCTTTCATAAATAACATGAGTGGTTTCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp GGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAAACTTCTTCTACAAAGTaGATTGGATCCTTTGGAATG +
Preference number: 4 (lower is better)
Translates to: GFNVFEGFTGYMDLHVYKTSSTK*IGSFGM
Trigger: CATTCCAAAGGATCCAATGCACTTTGTAGAAGAAGT...TTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGGTTTTCGCTGCTAGTTaGAGTAATTCCTTTGCACTC +
Preference number: 4 (lower is better)
Translates to: FPFLRLLLFSGVRGKSAKVFAAS*SNSFAL
Trigger: GAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAAC...CTTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TTCACACTTCCCAAACACTGCTACTATAAAGAGCTGTTAAAGCAGAATGAAAGACTAGACAAGTTCCACTaGTCAGCCAGAATGGTACTC +
Preference number: 4 (lower is better)
Translates to: FTLPKHCYYKELLKQNERLDKFH*SARMVL
Trigger: GAGTACCATTCTGGCTGAGCAGTGGAACTTGTCTAG...TCTTTCATTCTGCTTTAACAGCTCTTTATAGTAGCAGTGTTTGGGAAGTGTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR GCA 90 bp AGAGGAAAATCTGCCAAGCTCCAGAAAGTAGTCCTAAATAGCATAGATAAGATACTGTTTTGGCCTGAGTaGCTCCATTCCACATGTGAT +
Preference number: 4 (lower is better)
Translates to: RGKSAKLQKVVLNSIDKILFWPE*LHSTCD
Trigger: ATCACATGTGGAATGGAGGCACTCAGGCCAAAACAG...TATCTTATCTATGCTATTTAGGACTACTTTCTGGAGCTTGGCAGATTTTCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp CAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTCTGTTTTGGCCTGAGTaGCTCCATTCCACATGTGAT +
Preference number: 4 (lower is better)
Translates to: QRFSCCFTNPEWVVVSYFLFWPE*LHSTCD
Trigger: ATCACATGTGGAATGGAGGCACTCAGGCCAAAACAG...AAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000457847.1
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTCTGTTTTGGCCTGAGTaGCTCCATTCCACATGTGAT +
Preference number: 4 (lower is better)
Translates to: SKVFMLLYKSGMGGCKLLLFWPE*LHSTCD
Trigger: ATCACATGTGGAATGGAGGCACTCAGGCCAAAACAG...AAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000457847.1
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAATGGATTATGATGATGTaGCATTTTGGGACAAGTTTG +
Preference number: 4 (lower is better)
Translates to: WLQCIRGFHRVHGPSCLQWIMMM*HFGTSL
Trigger: CAAACTTGTCCCAAAATGGCACATCATCATAATCCA...TTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp GACCTCTCTGTCGCCTTAGGTTCTCAATCTGAACAAAAAGATACTAAGCGGCAGTTTAGAATTTGGGAATaGACTCTATGGGCTGATTTT +
Preference number: 4 (lower is better)
Translates to: DLSVALGSQSEQKDTKRQFRIWE*TLWADF
Trigger: AAAATCAGCCCATAGAGTGCATTCCCAAATTCTAAA...CTGCCGCTTAGTATCTTTTTGTTCAGATTGAGAACCTAAGGCGACAGAGAGGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp CGACCAAACTGTAACTTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAGGAGACATTCATGGGTaGCTAACTACCAACAAGTTG +
Preference number: 4 (lower is better)
Translates to: RPNCNFRKGTNFLSMCSLGDIHG*LTTNKL
Trigger: CAACTTGTTGGTAGTTAGGCACCCATGAATGTCTCC...TAAAGAACACATTGACAGGAAATTTGTTCCCTTCCGAAAGTTACAGTTTGGTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR GCA 90 bp CACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATGAACCAGATATCAGTAGCTaGAGCAGAGGAGAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: HRTYTKGIAIELVCFTYEPDISS*SRGEKD
Trigger: GTCCTTCTCTCCTCTGCTGCAGCTACTGATATCTGG...TTCATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR GCA 90 bp AGATGTCTTGGATTTCAGACACTCTTAAGACTTTGTACTTCAGGAAAGGATAAACCAGATATCAGTAGCTaGAGCAGAGGAGAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: RCLGFQTLLRLCTSGKDKPDISS*SRGEKD
Trigger: GTCCTTCTCTCCTCTGCTGCAGCTACTGATATCTGG...TTTATCCTTTCCTGAAGTACAAAGTCTTAAGAGTGTCTGAAATCCAAGACATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp AAAGTAGCACTAACATACCAGCTTAAATGCCCAGAAGAGGAGTGGGTTATTCTTCACCCTGCTGATTCTTaGCTAGTTGAGATAGAAACA +
Preference number: 4 (lower is better)
Translates to: KVALTYQLKCPEEEWVILHPADS*LVEIET
Trigger: TGTTTCTATCTCAACTAGGCAAGAATCAGCAGGGTG...AAGAATAACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGTTAGTGCTACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR GCA 90 bp TTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGGTTGATTCCACTGTGTaGTATCAAATCCAATTCGGC +
Preference number: 4 (lower is better)
Translates to: FPFLRLLLFSGVRGKSAKVDSTV*YQIQFG
Trigger: GCCGAATTGGATTTGATAGCACACAGTGGAATCAAC...CTTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642537.1
CDS-3UTR CCA 90 bp GCAAATGCAGTAAAGTCTCTTGGAACACAGAAAAACTTGCATTGTGAAGTAGAGAGTGGATCGCATGAGTaGCCAGTTTGCAGATATAGT +
Preference number: 4 (lower is better)
Translates to: ANAVKSLGTQKNLHCEVESGSHE*PVCRYS
Trigger: ACTATATCTGCAAACTGGCCACTCATGCGATCCACT...CTCTACTTCACAATGCAAGTTTTTCTGTGTTCCAAGAGACTTTACTGCATTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CCA 90 bp AAGAATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTAGTGGATCGCATGAGTaGCCAGTTTGCAGATATAGT +
Preference number: 4 (lower is better)
Translates to: KNARASLYLHSINLECGTSGSHE*PVCRYS
Trigger: ACTATATCTGCAAACTGGCCACTCATGCGATCCACT...AGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CCA 90 bp GCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTTCTACAAAGTGCATTaGATCCTTTGGAATGAGAAC +
Preference number: 4 (lower is better)
Translates to: ASMYSRVSQGTWTFMSTNFYKVH*ILWNEN
Trigger: GTTCTCATTCCAAAGGATCCAATGCACTTTGTAGAA...GTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TCTCATGAAAGACTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTTTCTACAAAGTGCATTaGATCCTTTGGAATGAGAAC +
Preference number: 4 (lower is better)
Translates to: SHERLPSGSHEWPVCRYSFYKVH*ILWNEN
Trigger: GTTCTCATTCCAAAGGATCCAATGCACTTTGTAGAA...ACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTCTTTCATGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CCA 90 bp TACCATAGTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATTCTACAAAGTGCATTaGATCCTTTGGAATGAGAAC +
Preference number: 4 (lower is better)
Translates to: YHSWLQCIRGFHRVHGPSFYKVH*ILWNEN
Trigger: GTTCTCATTCCAAAGGATCCAATGCACTTTGTAGAA...TGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCAACTATGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp CGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGTGCAATAAACCTAGAGTGTaGTACTTCTTCTACAAAGTG +
Preference number: 4 (lower is better)
Translates to: RKGTNFLSMCSLSLKWPCNKPRV*YFFYKV
Trigger: CACTTTGTAGAAGAAGTACCACACTCTAGGTTTATT...GCACGGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCCCTTCCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CCA 90 bp ATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTCCATGTTTCACAGGGTACATaGACCTTCATGTCTACAAAC +
Preference number: 4 (lower is better)
Translates to: ICFRKSLPAHSLRHSGFHVSQGT*TFMSTN
Trigger: GTTTGTAGACATGAAGGTCCATGTACCCTGTGAAAC...ATGGAAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp ATCTTAAAAGTAGCACTAACATACCAGCTTAAATGCCCAGAAGAGGAGTGGGTTGTTTCACAGGGTACATaGACCTTCATGTCTACAAAC +
Preference number: 4 (lower is better)
Translates to: ILKVALTYQLKCPEEEWVVSQGT*TFMSTN
Trigger: GTTTGTAGACATGAAGGTCCATGTACCCTGTGAAAC...AACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGTTAGTGCTACTTTTAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp AGGAGAGCTTTTCCCTTGTTTATGAGGTCACATGCCAGAAATTTGCTTTTTCTGGTTTCACAGGGTACATaGACCTTCATGTCTACAAAC +
Preference number: 4 (lower is better)
Translates to: RRAFPLFMRSHARNLLFLVSQGT*TFMSTN
Trigger: GTTTGTAGACATGAAGGTCCATGTACCCTGTGAAAC...CAGAAAAAGCAAATTTCTGGCATGTGACCTCATAAACAAGGGAAAAGCTCTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR CCA 90 bp TTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGAGGTCTTACCATAGTTaGCTTCAATGTATTCGAGGG +
Preference number: 4 (lower is better)
Translates to: FPFLRLLLFSGVRGKSAKRSYHS*LQCIRG
Trigger: CCCTCGAATACATTGAAGCCAACTATGGTAAGACCT...CTTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp CAGGAATCTTCCAGGTCTTACCATAGTTGGCTTCAATGTATTCGAGGGTTTCACCTATCTCAATATAACTaGATAACCTCATCCCACTCA +
Preference number: 4 (lower is better)
Translates to: QESSRSYHSWLQCIRGFHLSQYN*ITSSHS
Trigger: TGAGTGGGATGAGGTTATCCAGTTATATTGAGATAG...GTGAAACCCTCGAATACATTGAAGCCAACTATGGTAAGACCTGGAAGATTCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TTCCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTAAGTTTTGTGAAATCATaGCCTCTTTCAAGATCATGT +
Preference number: 4 (lower is better)
Translates to: FQRVSLSRLAGDLYSQSLSFVKS*PLSRSC
Trigger: ACATGATCTTGAAAGAGGCCATGATTTCACAAAACT...TAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
CDS-3UTR CCA 90 bp ATGAAAGACTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGTTTACAAATCCGGAATaGGTGGTTGTAAGTTACTTT +
Preference number: 4 (lower is better)
Translates to: MKDYQVDRMSGQFADIVQFTNPE*VVVSYF
Trigger: AAAGTAACTTACAACCACCCATTCCGGATTTGTAAA...CTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTCTTTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000642537.1
ENST00000645933.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACAGTGTAAACAGGACAGAAGACTGTTaGTTATCATTTATCAAAGGT +
Preference number: 4 (lower is better)
Translates to: SQGTWTFMSTNSVQHSVNRTEDC*LSFIKG
Trigger: ACCTTTGATAAATGATAACCAACAGTCTTCTGTCCT...GTTTACACTGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTCCATTCGATGATGTGCCATTTTaGGACAAGTTTGCTGACAAT +
Preference number: 4 (lower is better)
Translates to: LFSKKSTSPFPQTFRFPFDDVPF*DKFADN
Trigger: ATTGTCAGCAAACTTGTCCCAAAATGGCACATCATC...GAATGGAAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTCCATTCCAGCTATTTAGAATTTaGGAATGCACTCTATGGGCT +
Preference number: 4 (lower is better)
Translates to: LFSKKSTSPFPQTFRFPFQLFRI*ECTLWA
Trigger: AGCCCATAGAGTGCATTCCCAAATTCTAAATAGCTG...GAATGGAAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TTATATAGGAGCTTGTTAATGGGTCCCTACAAAATCTCTGTATTAGGTTGGGTTATGGGTAAGATCTCCTaGCAAAGAATGGGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: LYRSLLMGPYKISVLGWVMGKIS*QRMGVP
Trigger: TGGGACTCCCATTCTTTGCCAGGAGATCTTACCCAT...AACCCAACCTAATACAGAGATTTTGTAGGGACCCATTAACAAGCTCCTATATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000675695.1
CDS-3UTR CCA 90 bp CAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTATGGGTAAGATCTCCTaGCAAAGAATGGGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: QRFSCCFTNPEWVVVSYFMGKIS*QRMGVP
Trigger: TGGGACTCCCATTCTTTGCCAGGAGATCTTACCCAT...AAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCTACAAAGTGCATTCTCTCAGGATGTCTCTaGAGACATTCATGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: LYLHSINLECGTSSTKCILSGCL*RHSWVP
Trigger: AGGCACCCATGAATGTCTCCAGAGACATCCTGAGAG...AATGCACTTTGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTACCTGGTTGTCCTaGTTATCAATTAAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: WLQCIRGFHRVHGPSCLQTTWLS*LSIKRN
Trigger: ATTCCTCTTAATTGATAACCAGGACAACCAGGTAGT...TTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp AAGAATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTGACTGGGTGACTACCTaGTTGTCCTGGTTATCAATT +
Preference number: 4 (lower is better)
Translates to: KNARASLYLHSINLECGTDWVTT*LSWLSI
Trigger: AATTGATAACCAGGACAACCAGGTAGTCACCCAGTC...AGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR CCA 90 bp AGGAGCTTGTTAATGGGTCCCTACAAAATCTCTGTATTAGGTTGGGTTAGAAGGAACTGTCTTATTGTCTaGAGAGAAGGCATTTTCCAG +
Preference number: 4 (lower is better)
Translates to: RSLLMGPYKISVLGWVRRNCLIV*REGIFQ
Trigger: CTGGAAAATGCCTTCTCTCCAGACAATAAGACAGTT...CCTTCTAACCCAACCTAATACAGAGATTTTGTAGGGACCCATTAACAAGCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000675695.1
CDS-3UTR CCA 90 bp CTGAAAGAATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTTACCTGTTAGAAGGTaGGAATGTGGCACTTTCTTG +
Preference number: 4 (lower is better)
Translates to: LKECSSFFIPTLNKPRVWLPVRR*ECGTFL
Trigger: CAAGAAAGTGCCACATTCCCACCTTCTAACAGGTAA...CCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTCTTTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TTATATAGGAGCTTGTTAATGGGTCCCTACAAAATCTCTGTATTAGGTTGGGTTATCTCTGTATTAGGTTaGGTTAGAAGGTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: LYRSLLMGPYKISVLGWVISVLG*VRRCQG
Trigger: CCCCTGGCACCTTCTAACCCAACCTAATACAGAGAT...AACCCAACCTAATACAGAGATTTTGTAGGGACCCATTAACAAGCTCCTATATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000642952.1
ENST00000644273.1
ENST00000675695.1
CDS-3UTR CCA 90 bp AGCAAACTAGGTAGCATATGGGATAATATTAGGAGACAACTGCTTAACCAAGAAATCTCTGTATTAGGTTaGGTTAGAAGGTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SKLGSIWDNIRRQLLNQEISVLG*VRRCQG
Trigger: CCCCTGGCACCTTCTAACCCAACCTAATACAGAGAT...TTCTTGGTTAAGCAGTTGTCTCCTAATATTATCCCATATGCTACCTAGTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000675695.1
CDS-3UTR CCA 90 bp GGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCATCTCTGTATTAGGTTaGGTTAGAAGGTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: GCKLLSLICFRKSLPAHSISVLG*VRRCQG
Trigger: CCCCTGGCACCTTCTAACCCAACCTAATACAGAGAT...GGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000675695.1
CDS-3UTR CCA 90 bp GCCTCCTTTAAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTGATTCTTGCCATAGTTaGCTTCAATGTATTCGAGGG +
Preference number: 4 (lower is better)
Translates to: ASFKHRTYTKGIAIELVCDSCHS*LQCIRG
Trigger: CCCTCGAATACATTGAAGCCAACTATGGCAAGAATC...ACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTTAAAGGAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000448551.6
ENST00000642952.1
ENST00000644273.1
CDS-3UTR CCA 90 bp AACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGTGCCAGAGGTATACCTTTCAAACTTCTaGCTTCTACCCATACCAGTT +
Preference number: 4 (lower is better)
Translates to: NKFPVNVFFKSQVAVPEVYLSNF*LLPIPV
Trigger: AACTGGTATGGGTAGAAGCCAGAAGTTTGAAAGGTA...TACCTCTGGCACGGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
CDS-3UTR CCA 90 bp TTATCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTATCTCATCAAAAAGCTTaGCCTCCCGAAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LSKVFMLLYKSGMGGCKLSHQKA*PPEVLG
Trigger: TCCCAGCACTTCGGGAGGCCAAGCTTTTTGATGAGA...TAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642177.1
ENST00000642537.1
CDS-3UTR CCA 90 bp ATAGTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTATCTTTCAAACTTCTaGCTTCTACCCATACCAGTT +
Preference number: 4 (lower is better)
Translates to: IVGFNVFEGFTGYMDLHVYLSNF*LLPIPV
Trigger: AACTGGTATGGGTAGAAGCCAGAAGTTTGAAAGATA...GACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCAACTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp AGGAATTATAATACAAGTGCAAGGGTGGAGGAGAGGGCAGCCCAGACAAATACAAAGGGTGGTAAAGACTaGGTAGGAATTATAATACAA +
Preference number: 4 (lower is better)
Translates to: RNYNTSARVEERAAQTNTKGGKD*VGIIIQ
Trigger: TTGTATTATAATTCCTACCCAGTCTTTACCACCCTT...TGTATTTGTCTGGGCTGCCCTCTCCTCCACCCTTGCACTTGTATTATAATTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR CCA 90 bp GCTACAGATACATCATTTGCAGCATCACACCATGCTCTAGATAATTCTCTGGTCTATTCAGTAGTCATGTaGCTAGTGGCTACAGATACA +
Preference number: 4 (lower is better)
Translates to: ATDTSFAASHHALDNSLVYSVVM*LVATDT
Trigger: TGTATCTGTAGCCACTAGCCACATGACTACTGAATA...GACCAGAGAATTATCTAGAGCATGGTGTGATGCTGCAAATGATGTATCTGTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR CCA 90 bp AGTAACATGATAGAAAATCTGGGACTCACACCATCTGTCCAGACAGTTCTATCAATGAGGGGCAGAGGATaGAGAAAGGTTAACTTTTCA +
Preference number: 4 (lower is better)
Translates to: SNMIENLGLTPSVQTVLSMRGRG*RKVNFS
Trigger: TGAAAAGTTAACCTTTCTCCATCCTCTGCCCCTCAT...TGATAGAACTGTCTGGACAGATGGTGTGAGTCCCAGATTTTCTATCATGTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR TCA 90 bp GTCTATGTAGGGAAGAATATAGAACCTGTGTCAATTGGGCCAAGATGTCTTGGACACTTGGTTGTCTTTTaGAAGTATCTCAGTCGTTTT +
Preference number: 4 (lower is better)
Translates to: VYVGKNIEPVSIGPRCLGHLVVF*KYLSRF
Trigger: AAAACGACTGAGATACTTTCAAAAGACAACCAAGTG...TCCAAGACATCTTGGCCCAATTGACACAGGTTCTATATTCTTCCCTACATAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp AAAAGAAGTAGGTATTTGTCTCATTCATCTAGGCTTCTCCACTGTAACCTAGCAGCTTCCTTTGGATTTTaGCAAACCAGCTCCATTCTT +
Preference number: 4 (lower is better)
Translates to: KRSRYLSHSSRLLHCNLAASFGF*QTSSIL
Trigger: AAGAATGGAGCTGGTTTGTCAAAATCCAAAGGAAGC...TGCTAGGTTACAGTGGAGAAGCCTAGATGAATGAGACAAATACCTACTTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GTCTCTAACCTGAAAGAATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTGCTTCCTTTGGATTTTaGCAAACCAGCTCCATTCTT +
Preference number: 4 (lower is better)
Translates to: VSNLKECSSFFIPTLNKPASFGF*QTSSIL
Trigger: AAGAATGGAGCTGGTTTGTCAAAATCCAAAGGAAGC...AGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTCTTTCAGGTTAGAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR TCA 90 bp CGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCTACATCATTCTTCCATAGGTaGTACTGCAGTGCAAATGCA +
Preference number: 4 (lower is better)
Translates to: RASLYLHSINLECGTSSTSFFHR*YCSANA
Trigger: TGCATTTGCACTGCAGTATCACCTATGGAAGAATGA...TGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR TCA 90 bp GCCTCCTTTAAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTCAATCTTTAGGCACTaGAATCCCATATTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: ASFKHRTYTKGIAIELVCSIFRH*NPIFSA
Trigger: AGCTGAGAATATGGGATTTCAGTGCCTAAAGATTGA...ACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTTAAAGGAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
ENST00000675695.1
CDS-3UTR TCA 90 bp CTGAAAGAATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTCAATCTTTAGGCACTaGAATCCCATATTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LKECSSFFIPTLNKPRVWSIFRH*NPIFSA
Trigger: AGCTGAGAATATGGGATTTCAGTGCCTAAAGATTGA...CCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTCTTTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR TCA 90 bp CACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATGAATTGCCACTCCTCTCATaGAAGACTACCAAGTGGATC +
Preference number: 4 (lower is better)
Translates to: HRTYTKGIAIELVCFTYELPLLS*KTTKWI
Trigger: GATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAA...TTCATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
ENST00000675695.1
CDS-3UTR TCA 90 bp AAGGAGAGCTTTTCCCTTGTTTATGAGGTCACATGCCAGAAATTTGCTTTTTCTTTGGATCCTTTGGAATaGGAACTTCCAGTCCATCAA +
Preference number: 4 (lower is better)
Translates to: KESFSLVYEVTCQKFAFSLDPLE*ELPVHQ
Trigger: TTGATGGACTGGAAGTTCTCATTCCAAAGGATCCAA...AGAAAAAGCAAATTTCTGGCATGTGACCTCATAAACAAGGGAAAAGCTCTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR TCA 90 bp TGGTTTTATGATAGAAGATACCTTTCAAACTTCTGGCTTCTACCCATACCAGTTTCATCAAGGTACTGCTaGAAGAATGCTCGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: WFYDRRYLSNFWLLPIPVSSRYC*KNARAS
Trigger: AGAAGCTCGAGCATTCTTTCAGCAGTACCTTGATGA...AACTGGTATGGGTAGAAGCCAGAAGTTTGAAAGGTATCTTCTATCATAAAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
CDS-3UTR TCA 90 bp AGAATGGTACTCCCAATTTGTTTAATGTTTTCGCTGCTAGTTGCAGTAATTCCTTCATCAAGGTACTGCTaGAAGAATGCTCGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: RMVLPICLMFSLLVAVIPSSRYC*KNARAS
Trigger: AGAAGCTCGAGCATTCTTTCAGCAGTACCTTGATGA...AGGAATTACTGCAACTAGCAGCGAAAACATTAAACAAATTGGGAGTACCATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR TCA 90 bp TCCGGAATGGGTGGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTATCCCAAATTTGTGTTTaGGCGGAAGTCCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: SGMGGCKLLSLICFRKSLSQICV*AEVLHP
Trigger: AGGATGCAGGACTTCCGCTCAAACACAAATTTGGGA...TAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACCACCCATTCCGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000457847.1
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675736.1
CDS-3UTR TCA 90 bp ATTTATCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTCCCAAATTTGTGTTTaGGCGGAAGTCCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: IYQRFSCCFTNPEWVVVSSQICV*AEVLHP
Trigger: AGGATGCAGGACTTCCGCTCAAACACAAATTTGGGA...ACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGATAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000457847.1
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675736.1
CDS-3UTR TCA 90 bp AGGAATCTTCCAGGTCTTACCATAGTTGGCTTCAATGTATTCGAGGGTTTCACAGAGAATTACATCAGATaGCTCTTTCTGTGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: RNLPGLTIVGFNVFEGFTENYIR*LFLCLQ
Trigger: TTGAAGACACAGAAAGAGTCATCTGATGTAATTCTC...TGTGAAACCCTCGAATACATTGAAGCCAACTATGGTAAGACCTGGAAGATTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATGAAAACCTGTACAGAACTTaGACTCTTCAAAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: HRTYTKGIAIELVCFTYENLYRT*TLQRVG
Trigger: CCCCACCCTTTGAAGAGTTCAAGTTCTGTACAGGTT...TTCATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR TCA 90 bp TGTAGGGAAGAATATAGAACCTGTGTCAATTGGGCCAAGATGTCTTGGATTTCAACAAACTCTATGATCTaGGGTAGGGTGAATAGTTGT +
Preference number: 4 (lower is better)
Translates to: CREEYRTCVNWAKMSWISTNSMI*GRVNSC
Trigger: ACAACTATTCACCCTACCTCAGATCATAGAGTTTGT...TGAAATCCAAGACATCTTGGCCCAATTGACACAGGTTCTATATTCTTCCCTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp TTATCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTAGGTAAAGTAGAAGTCTaGGTTCTTGCCCCATCGACA +
Preference number: 4 (lower is better)
Translates to: LSKVFMLLYKSGMGGCKLGKVEV*VLAPST
Trigger: TGTCGATGGGGCAAGAACTCAGACTTCTACTTTACC...TAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACACTGACTCAGACATCTTaGGGGGAAAAGGAAACTAAA +
Preference number: 4 (lower is better)
Translates to: VTFSNLFSKKSTSPFPQTLTQTS*GEKETK
Trigger: TTTAGTTTCCTTTTCCCCTCAAGATGTCTGAGTCAG...TGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GTTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAATGCACTCTATGGGCTaGTTTTCTAGCAAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: VSILETTIVLWCQRKICQMHSMG*FSSKEK
Trigger: TTTCTCTTTGCTAGAAAATCAGCCCATAGAGTGCAT...TTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GAATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCATGCACTCTATGGGCTaGTTTTCTAGCAAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: ECSSFFIPTLNKPRVWYFMHSMG*FSSKEK
Trigger: TTTCTCTTTGCTAGAAAATCAGCCCATAGAGTGCAT...GAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR TCA 90 bp ATCTTAAAAGTAGCACTAACATACCAGCTTAAATGCCCAGAAGAGGAGTGGGTTATGCACTCTATGGGCTaGTTTTCTAGCAAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: ILKVALTYQLKCPEEEWVMHSMG*FSSKEK
Trigger: TTTCTCTTTGCTAGAAAATCAGCCCATAGAGTGCAT...AACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGTTAGTGCTACTTTTAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp AGGCCTGAGGCTAAGAACTGTATACTTCATTTAATCCCCCTAAAAACCCTTAGATGCATTTCTAAATACTaGGCACAAGCAAATGGTCCT +
Preference number: 4 (lower is better)
Translates to: RPEAKNCILHLIPLKTLRCISKY*AQANGP
Trigger: AGGACCATTTGCTTGTGCTCAGTATTTAGAAATGCA...TCTAAGGGTTTTTAGGGGGATTAAATGAAGTATACAGTTCTTAGCCTCAGGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp TGTAGGGAAGAATATAGAACCTGTGTCAATTGGGCCAAGATGTCTTGGATTTCATGCATTTCTAAATACTaGGCACAAGCAAATGGTCCT +
Preference number: 4 (lower is better)
Translates to: CREEYRTCVNWAKMSWISCISKY*AQANGP
Trigger: AGGACCATTTGCTTGTGCTCAGTATTTAGAAATGCA...TGAAATCCAAGACATCTTGGCCCAATTGACACAGGTTCTATATTCTTCCCTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp TTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGTGCATTTCTAAATACTaGGCACAAGCAAATGGTCCT +
Preference number: 4 (lower is better)
Translates to: FPFLRLLLFSGVRGKSAKCISKY*AQANGP
Trigger: AGGACCATTTGCTTGTGCTCAGTATTTAGAAATGCA...CTTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp AGGAATCTTCCAGGTCTTACCATAGTTGGCTTCAATGTATTCGAGGGTTTCACAAAGATGAAGTATGGATaGATCAGAATCAGAGGTAAG +
Preference number: 4 (lower is better)
Translates to: RNLPGLTIVGFNVFEGFTKMKYG*IRIRGK
Trigger: CTTACCTCTGATTCTGATTCATCCATACTTCATCTT...TGTGAAACCCTCGAATACATTGAAGCCAACTATGGTAAGACCTGGAAGATTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp TGTCCCACCAAGCAGCTACTCTTAGGGATGCTCAATTTTAGGAACTATGGTTTTAAGATGAAGTATGGATaGATCAGAATCAGAGGTAAG +
Preference number: 4 (lower is better)
Translates to: CPTKQLLLGMLNFRNYGFKMKYG*IRIRGK
Trigger: CTTACCTCTGATTCTGATTCATCCATACTTCATCTT...AAAACCATAGTTCCTAAAATTGAGCATCCCTAAGAGTAGCTGCTTGGTGGGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp TTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGGTGATGAAAGAAAAGTaGTCCAATGAGGTACTGAAG +
Preference number: 4 (lower is better)
Translates to: FPFLRLLLFSGVRGKSAKVMKEK*SNEVLK
Trigger: CTTCAGTACCTCATTGGATCACTTTTCTTTCATCAC...CTTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GGGAGTCCCAATTGGAAATGGGGAGAAATGTGGAGTGTATGCATTTCTAAATACTTCCAGATAAAGGTATaGAGGTTGCCTAAGAATTCT +
Preference number: 4 (lower is better)
Translates to: GSPNWKWGEMWSVCISKYFQIKV*RLPKNS
Trigger: AGAATTCTTAGGCAACCTTCATACCTTTATCTGGAA...GTATTTAGAAATGCATACACTCCACATTTCTCCCCATTTCCAATTGGGACTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp TTATCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTATTAGCAGGTTGGTGCTaGTGGTTCCCTTGGGAAATA +
Preference number: 4 (lower is better)
Translates to: LSKVFMLLYKSGMGGCKLLAGWC*WFPWEI
Trigger: TATTTCCCAAGGGAACCATCAGCACCAACCTGCTAA...TAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp AGCAAACTAGGTAGCATATGGGATAATATTAGGAGACAACTGCTTAACCAAGAAATTGCCTTCCCTGAGTaGGATGTTAGAGGTGATCTA +
Preference number: 4 (lower is better)
Translates to: SKLGSIWDNIRRQLLNQEIAFPE*DVRGDL
Trigger: TAGATCACCTCTAACATCTCACTCAGGGAAGGCAAT...TTCTTGGTTAAGCAGTTGTCTCCTAATATTATCCCATATGCTACCTAGTTTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACAGAAAGGCTAGAATATTaGAAAAGAAGTCCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: VTFSNLFSKKSTSPFPQTERLEY*KRSPGE
Trigger: CTCCCCTGGACTTCTTTTTCAATATTCTAGCCTTTC...TGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GCACTAACATACCAGCTTAAATGCCCAGAAGAGGAGTGGGTTATTCTTTTCAACCTTTCAACCCTACTGTaGGAGCTGCTTATAATTATA +
Preference number: 4 (lower is better)
Translates to: ALTYQLKCPEEEWVILFNLSTLL*ELLIII
Trigger: TATAATTATAAGCAGCTCTCACAGTAGGGTTGAAAG...GTTGAAAAGAATAACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGTTAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000675695.1
CDS-3UTR TCA 90 bp CCTCAGACATTCAGGTTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGACTTTCAACCCTACTGTaGGAGCTGCTTATAATTATA +
Preference number: 4 (lower is better)
Translates to: PQTFRFPFLRLLLFSGVRLSTLL*ELLIII
Trigger: TATAATTATAAGCAGCTCTCACAGTAGGGTTGAAAG...TCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAACCTGAATGTCTGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000675695.1
CDS-3UTR TCA 90 bp CTGGATAACGACCAAACTGTAACTTTCGGAAGGGAACAAATTTCCTGTCAATGTTGGGTCTTGGGCACTTaGCAGTTATATACTTCATTT +
Preference number: 4 (lower is better)
Translates to: LDNDQTVTFGREQISCQCWVLGT*QLYTSF
Trigger: AAATGAAGTATATAACTGTCAAGTGCCCAAGACCCA...ACATTGACAGGAAATTTGTTCCCTTCCGAAAGTTACAGTTTGGTCGTTATCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR TCA 90 bp AATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTTCACAGCTCCACAATaGCTTAAGGAAATAGGGCTA +
Preference number: 4 (lower is better)
Translates to: NARASLYLHSINLECGTSFTAPQ*LKEIGL
Trigger: TAGCCCTATTTCCTTAAGTCATTGTGGAGCTGTGAA...AGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR GCA 90 bp GTTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAATACTGCAGTGCAAATaGAGTAAAGTCTCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: VSILETTIVLWCQRKICQILQCK*SKVSWN
Trigger: GTTCCAAGAGACTTTACTGCATTTGCACTGCAGTAT...TTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp ATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTCCATATACTGCAGTGCAAATaGAGTAAAGTCTCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: ICFRKSLPAHSLRHSGFHILQCK*SKVSWN
Trigger: GTTCCAAGAGACTTTACTGCATTTGCACTGCAGTAT...ATGGAAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGATACTGCAGTGCAAATaGAGTAAAGTCTCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: FPFLRLLLFSGVRGKSAKILQCK*SKVSWN
Trigger: GTTCCAAGAGACTTTACTGCATTTGCACTGCAGTAT...CTTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp GTCTATGTAGGGAAGAATATAGAACCTGTGTCAATTGGGCCAAGATGTCTTGGAACTTCTTCTACAAAGTaGATTGGATCCTTTGGAATG +
Preference number: 4 (lower is better)
Translates to: VYVGKNIEPVSIGPRCLGTSSTK*IGSFGM
Trigger: CATTCCAAAGGATCCAATGCACTTTGTAGAAGAAGT...TCCAAGACATCTTGGCCCAATTGACACAGGTTCTATATTCTTCCCTACATAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp GTTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGTACTGCTGAAAGAATaGTCGAGCTTCTTTATACCT +
Preference number: 4 (lower is better)
Translates to: VSILETTIVLWCQRKICQVLLKE*SSFFIP
Trigger: AGGTATAAAGAAGCTCGAGCATTCTTTCAGCAGTAC...TTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675736.1
CDS-3UTR GCA 90 bp CACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATGAACTAGACAAGTTCCACTaGTCAGCCAGAATGGTACTC +
Preference number: 4 (lower is better)
Translates to: HRTYTKGIAIELVCFTYELDKFH*SARMVL
Trigger: GAGTACCATTCTGGCTGAGCAGTGGAACTTGTCTAG...TTCATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
CDS-3UTR GCA 90 bp AAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATCTGTTTTGGCCTGAGTaGCTCCATTCCACATGTGAT +
Preference number: 4 (lower is better)
Translates to: KHRTYTKGIAIELVCFTYLFWPE*LHSTCD
Trigger: ATCACATGTGGAATGGAGGCACTCAGGCCAAAACAG...ATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
ENST00000675695.1
CDS-3UTR GCA 90 bp AGCAAACTAGGTAGCATATGGGATAATATTAGGAGACAACTGCTTAACCAAGAAACATACCAGCTTAAATaGCCAGAAGAGGAGTGGGTT +
Preference number: 4 (lower is better)
Translates to: SKLGSIWDNIRRQLLNQETYQLK*PEEEWV
Trigger: AACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGT...TTCTTGGTTAAGCAGTTGTCTCCTAATATTATCCCATATGCTACCTAGTTTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCTACAAAGTGCAGAAGTCTGAGTTCTTaGCCCATCGACATTCAACAG +
Preference number: 4 (lower is better)
Translates to: SLYLHSINLECGTSSTKCRSLSS*PIDIQQ
Trigger: CTGTTGAATGTCGATGGGGCAAGAACTCAGACTTCT...GCACTTTGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR GCA 90 bp ATTCAGCTTCCTTTCCATAGTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTACAAAGGTTTTCATGTTaGTTTACAAATCCGGAATGG +
Preference number: 4 (lower is better)
Translates to: IQLPFHSWLQCIRGFHRVQRFSC*FTNPEW
Trigger: CCATTCCGGATTTGTAAAGCAACATGAAAACCTTTG...TACCCTGTGAAACCCTCGAATACATTGAAGCCAACTATGGAAAGGAAGCTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
CDS-3UTR GCA 90 bp TTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTCCATTCTGGATTATGATGATGTaGCATTTTGGGACAAGTTTG +
Preference number: 4 (lower is better)
Translates to: LFSKKSTSPFPQTFRFPFWIMMM*HFGTSL
Trigger: CAAACTTGTCCCAAAATGGCACATCATCATAATCCA...GAATGGAAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp GCAAATGCAGTAAAGTCTCTTGGAACACAGAAAAACTTGCATTGTGAAGTAGAGGTTGATTCCACTGTGTaGTATCAAATCCAATTCGGC +
Preference number: 4 (lower is better)
Translates to: ANAVKSLGTQKNLHCEVEVDSTV*YQIQFG
Trigger: GCCGAATTGGATTTGATAGCACACAGTGGAATCAAC...CTCTACTTCACAATGCAAGTTTTTCTGTGTTCCAAGAGACTTTACTGCATTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642537.1
ENST00000676371.1
CDS-3UTR CCA 90 bp TCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTCAATTCGGCTTCCTTTaGATTTTGACAAACCAGCTC +
Preference number: 4 (lower is better)
Translates to: SNLFSKKSTSPFPQTFRFQFGFL*ILTNQL
Trigger: GAGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTG...AAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp CAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTAGTGGATCGCATGAGTaGCCAGTTTGCAGATATAGT +
Preference number: 4 (lower is better)
Translates to: QRFSCCFTNPEWVVVSYFSGSHE*PVCRYS
Trigger: ACTATATCTGCAAACTGGCCACTCATGCGATCCACT...AAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp AGCAAACTAGGTAGCATATGGGATAATATTAGGAGACAACTGCTTAACCAAGAAAGTGGATCGCATGAGTaGCCAGTTTGCAGATATAGT +
Preference number: 4 (lower is better)
Translates to: SKLGSIWDNIRRQLLNQESGSHE*PVCRYS
Trigger: ACTATATCTGCAAACTGGCCACTCATGCGATCCACT...TTCTTGGTTAAGCAGTTGTCTCCTAATATTATCCCATATGCTACCTAGTTTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TCCTTTAAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCAGTGGATCGCATGAGTaGCCAGTTTGCAGATATAGT +
Preference number: 4 (lower is better)
Translates to: SFKHRTYTKGIAIELVCFSGSHE*PVCRYS
Trigger: ACTATATCTGCAAACTGGCCACTCATGCGATCCACT...GAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTTAAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
ENST00000675695.1
CDS-3UTR CCA 90 bp TCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCTACAAAGTGCAGTGGATCGCATGAGTaGCCAGTTTGCAGATATAGT +
Preference number: 4 (lower is better)
Translates to: SLYLHSINLECGTSSTKCSGSHE*PVCRYS
Trigger: ACTATATCTGCAAACTGGCCACTCATGCGATCCACT...GCACTTTGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CCA 90 bp TTAAATGCCCAGAAGAGGAGTGGGTTATTCTTTTCAACTAGTATATCCTTCCTTGTGCATTGGATCCTTTaGAATGAGAACTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: LNAQKRSGLFFSTSISFLVHWIL*NENFQS
Trigger: GGACTGGAAGTTCTCATTCCAAAGGATCCAATGCAC...AAGGAAGGATATACTAGTTGAAAAGAATAACCCACTCCTCTTCTGGGCATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp CAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTGTGCATTGGATCCTTTaGAATGAGAACTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: QRFSCCFTNPEWVVVSYFVHWIL*NENFQS
Trigger: GGACTGGAAGTTCTCATTCCAAAGGATCCAATGCAC...AAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCTACAAAGTGCGTGCATTGGATCCTTTaGAATGAGAACTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: SLYLHSINLECGTSSTKCVHWIL*NENFQS
Trigger: GGACTGGAAGTTCTCATTCCAAAGGATCCAATGCAC...GCACTTTGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CCA 90 bp TTTCAAATATTCAGTAGTCATGTGGCTAGTGGCTACAGATACATCATTTGCAGCACATCATCTTTTCCCTaGAAGGATAGTTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: FQIFSSHVASGYRYIICSTSSFP*KDSSKL
Trigger: CAGCTTGGAACTATCCTTCCAGGGAAAAGATGATGT...GCTGCAAATGATGTATCTGTAGCCACTAGCCACATGACTACTGAATATTTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR CCA 90 bp GCAAATGCAGTAAAGTCTCTTGGAACACAGAAAAACTTGCATTGTGAAGTAGAGACATCATCTTTTCCCTaGAAGGATAGTTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: ANAVKSLGTQKNLHCEVETSSFP*KDSSKL
Trigger: CAGCTTGGAACTATCCTTCCAGGGAAAAGATGATGT...CTCTACTTCACAATGCAAGTTTTTCTGTGTTCCAAGAGACTTTACTGCATTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000602526.1
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000676371.1
CDS-3UTR CCA 90 bp AAGAATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTGTTTCACAGGGTACATaGACCTTCATGTCTACAAAC +
Preference number: 4 (lower is better)
Translates to: KNARASLYLHSINLECGTVSQGT*TFMSTN
Trigger: GTTTGTAGACATGAAGGTCCATGTACCCTGTGAAAC...AGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
CDS-3UTR CCA 90 bp AGTCCCACGTCTTTACAGGAATCTTCCAGGTCTTACCATAGTTGGCTTCAATGTTCATGTCTAGTAACATaGTCTCACTTGAATGATTTG +
Preference number: 4 (lower is better)
Translates to: SPTSLQESSRSYHSWLQCSCLVT*SHLNDL
Trigger: CAAATCATTCAAGTGAGACCATGTTACTAGACATGA...ACATTGAAGCCAACTATGGTAAGACCTGGAAGATTCCTGTAAAGACGTGGGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp ATAGTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTCATGTCTAGTAACATaGTCTCACTTGAATGATTTG +
Preference number: 4 (lower is better)
Translates to: IVGFNVFEGFTGYMDLHVSCLVT*SHLNDL
Trigger: CAAATCATTCAAGTGAGACCATGTTACTAGACATGA...GACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCAACTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp AGGTCTTACCATAGTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGAAGTTTTGTGAAATCATaGCCTCTTTCAAGATCATGT +
Preference number: 4 (lower is better)
Translates to: RSYHSWLQCIRGFHRVHGSFVKS*PLSRSC
Trigger: ACATGATCTTGAAAGAGGCCATGATTTCACAAAACT...TCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCAACTATGGTAAGACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp ATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCAGGACAGAAGACTGTTaGTTATCATTTATCAAAGGT +
Preference number: 4 (lower is better)
Translates to: MYSRVSQGTWTFMSTNSVRTEDC*LSFIKG
Trigger: ACCTTTGATAAATGATAACCAACAGTCTTCTGTCCT...GACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GACTCCACAATCTTAAAAGTAGCACTAACATACCAGCTTAAATGCCCAGAAGAGGATGATGTGCCATTTTaGGACAAGTTTGCTGACAAT +
Preference number: 4 (lower is better)
Translates to: DSTILKVALTYQLKCPEEDDVPF*DKFADN
Trigger: ATTGTCAGCAAACTTGTCCCAAAATGGCACATCATC...CTCTTCTGGGCATTTAAGCTGGTATGTTAGTGCTACTTTTAAGATTGTGGAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GTTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGATGATGTGCCATTTTaGGACAAGTTTGCTGACAAT +
Preference number: 4 (lower is better)
Translates to: VSILETTIVLWCQRKICQDDVPF*DKFADN
Trigger: ATTGTCAGCAAACTTGTCCCAAAATGGCACATCATC...TTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GATAACGACCAAACTGTAACTTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTTGGGAATGCACTCTATaGGCTGATTTTCTAGCAAAG +
Preference number: 4 (lower is better)
Translates to: DNDQTVTFGREQISCQCVWECTL*ADFLAK
Trigger: CTTTGCTAGAAAATCAGCCCATAGAGTGCATTCCCA...AACACATTGACAGGAAATTTGTTCCCTTCCGAAAGTTACAGTTTGGTCGTTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR CCA 90 bp CTGAAAGAATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGCCTCATCAAGTAGGGTaGATTTTGCCCAAAAATAGT +
Preference number: 4 (lower is better)
Translates to: LKECSSFFIPTLNKPRVWPHQVG*ILPKNS
Trigger: ACTATTTTTGGGCAAAATCCACCCTACTTGATGAGG...CCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTCTTTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR CCA 90 bp CAGAATGGTACTCCCAATTTGTTTAATGTTTTCGCTGCTAGTTGCAGTAATTCCAGAACCTGTGTCAATTaGGCCAAGATGTCTTGGATT +
Preference number: 4 (lower is better)
Translates to: QNGTPNLFNVFAASCSNSRTCVN*AKMSWI
Trigger: AATCCAAGACATCTTGGCCCAATTGACACAGGTTCT...GGAATTACTGCAACTAGCAGCGAAAACATTAAACAAATTGGGAGTACCATTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCGACTGGGTGACTACCTaGTTGTCCTGGTTATCAATT +
Preference number: 4 (lower is better)
Translates to: CKLLSLICFRKSLPAHSLDWVTT*LSWLSI
Trigger: AATTGATAACCAGGACAACCAGGTAGTCACCCAGTC...GAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp ATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTCCATAACTGTCTTATTGTCTaGAGAGAAGGCATTTTCCAG +
Preference number: 4 (lower is better)
Translates to: ICFRKSLPAHSLRHSGFHNCLIV*REGIFQ
Trigger: CTGGAAAATGCCTTCTCTCCAGACAATAAGACAGTT...ATGGAAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACACTTGTGGTCTTTTTATaGCAACACATTGCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: VTFSNLFSKKSTSPFPQTLVVFL*QHIAFP
Trigger: AGGGAAGGCAATGTGTTGCCATAAAAAGACCACAAG...TGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp ATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCTACAAAGTGCATTGGTGGCTTTATCCTACTTaGACTGAGAATACACCACCT +
Preference number: 4 (lower is better)
Translates to: IPTLNKPRVWYFFYKVHWWLYPT*TENTPP
Trigger: AGGTGGTGTATTCTCAGTCCAAGTAGGATAAAGCCA...CCAATGCACTTTGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CCA 90 bp GTCTCTAACCTGAAAGAATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTTGGCTTTATCCTACTTaGACTGAGAATACACCACCT +
Preference number: 4 (lower is better)
Translates to: VSNLKECSSFFIPTLNKPWLYPT*TENTPP
Trigger: AGGTGGTGTATTCTCAGTCCAAGTAGGATAAAGCCA...AGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTCTTTCAGGTTAGAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
3UTR CAA 72 bp TCATCTGCTGAATGTGGTAAGCTGCTCTTCAACTTTTaGCTTGCGTACCGTGGAAGTAAAGACTTTGAAAAA +
Preference number: 4 (lower is better)
Translates to: SSAECGKLLFNF*LAYRGSKDFEK
Trigger: TTTTTCAAAGTCTTTACTTCCACGGTACGCAAGCAAAAAGTTGAAGAGCAGCTTACCACATTCAGCAGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642644.1
3UTR CAA 72 bp GAACTCACTGAATGTGGTAAGCTGCTCTTCAACTTTTaGCTTGCGTACCGTGGAAGTAAAGACTTTGAAAAA +
Preference number: 4 (lower is better)
Translates to: ELTECGKLLFNF*LAYRGSKDFEK
Trigger: TTTTTCAAAGTCTTTACTTCCACGGTACGCAAGCAAAAAGTTGAAGAGCAGCTTACCACATTCAGTGAGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674767.1
CDS-3UTR TCA 90 bp ATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTCCATCACTTGGTTGTCTTTTaGAAGTATCTCAGTCGTTTT +
Preference number: 4 (lower is better)
Translates to: ICFRKSLPAHSLRHSGFHHLVVF*KYLSRF
Trigger: AAAACGACTGAGATACTTTCAAAAGACAACCAAGTG...ATGGAAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp TTATATAGGAGCTTGTTAATGGGTCCCTACAAAATCTCTGTATTAGGTTGGGTTGCTTCCTTTGGATTTTaGCAAACCAGCTCCATTCTT +
Preference number: 4 (lower is better)
Translates to: LYRSLLMGPYKISVLGWVASFGF*QTSSIL
Trigger: AAGAATGGAGCTGGTTTGTCAAAATCCAAAGGAAGC...AACCCAACCTAATACAGAGATTTTGTAGGGACCCATTAACAAGCTCCTATATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000675695.1
CDS-3UTR TCA 90 bp TGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCTCATTCTTCCATAGGTaGTACTGCAGTGCAAATGCA +
Preference number: 4 (lower is better)
Translates to: CKLLSLICFRKSLPAHSLSFFHR*YCSANA
Trigger: TGCATTTGCACTGCAGTATCACCTATGGAAGAATGA...GAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp ATTTGTTTAATGTTTTCGCTGCTAGTTGCAGTAATTCCTTTGCACTCTTCCGAATCATTCTTCCATAGGTaGTACTGCAGTGCAAATGCA +
Preference number: 4 (lower is better)
Translates to: ICLMFSLLVAVIPLHSSESFFHR*YCSANA
Trigger: TGCATTTGCACTGCAGTATCACCTATGGAAGAATGA...TTCGGAAGAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAACATTAAACAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR TCA 90 bp CCTGAGGCTAAGAACTGTATACTTCATTTAATCCCCCTAAAAACCCTTAGAAGTTCAATCTTTAGGCACTaGAATCCCATATTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PEAKNCILHLIPLKTLRSSIFRH*NPIFSA
Trigger: AGCTGAGAATATGGGATTTCAGTGCCTAAAGATTGA...ACTTCTAAGGGTTTTTAGGGGGATTAAATGAAGTATACAGTTCTTAGCCTCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GATAACGACCAAACTGTAACTTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTTCAATCTTTAGGCACTaGAATCCCATATTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: DNDQTVTFGREQISCQCVSIFRH*NPIFSA
Trigger: AGCTGAGAATATGGGATTTCAGTGCCTAAAGATTGA...AACACATTGACAGGAAATTTGTTCCCTTCCGAAAGTTACAGTTTGGTCGTTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR TCA 90 bp TCCTTTAAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCTTGGATCCTTTGGAATaGGAACTTCCAGTCCATCAA +
Preference number: 4 (lower is better)
Translates to: SFKHRTYTKGIAIELVCFLDPLE*ELPVHQ
Trigger: TTGATGGACTGGAAGTTCTCATTCCAAAGGATCCAA...GAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTTAAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
ENST00000675695.1
CDS-3UTR TCA 90 bp TTATATAGGAGCTTGTTAATGGGTCCCTACAAAATCTCTGTATTAGGTTGGGTTTTGGATCCTTTGGAATaGGAACTTCCAGTCCATCAA +
Preference number: 4 (lower is better)
Translates to: LYRSLLMGPYKISVLGWVLDPLE*ELPVHQ
Trigger: TTGATGGACTGGAAGTTCTCATTCCAAAGGATCCAA...AACCCAACCTAATACAGAGATTTTGTAGGGACCCATTAACAAGCTCCTATATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000642952.1
ENST00000675695.1
CDS-3UTR TCA 90 bp TTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGGAGAATTACATCAGATaGCTCTTTCTGTGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: FPFLRLLLFSGVRGKSAKENYIR*LFLCLQ
Trigger: TTGAAGACACAGAAAGAGTCATCTGATGTAATTCTC...CTTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GAATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCGAGAATTACATCAGATaGCTCTTTCTGTGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: ECSSFFIPTLNKPRVWYFENYIR*LFLCLQ
Trigger: TTGAAGACACAGAAAGAGTCATCTGATGTAATTCTC...GAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
CDS-3UTR TCA 90 bp AAAAGAAGTAGGTATTTGTCTCATTCATCTAGGCTTCTCCACTGTAACCTAGCAATGGTCTCACTTGAATaGTTTGTCAACAAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: KRSRYLSHSSRLLHCNLAMVSLE*FVNKCH
Trigger: ATGGCACTTGTTGACAAATCATTCAAGTGAGACCAT...TGCTAGGTTACAGTGGAGAAGCCTAGATGAATGAGACAAATACCTACTTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp AACTGTAACTTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCCTGACTCAGACATCTTaGGGGGAAAAGGAAACTAAA +
Preference number: 4 (lower is better)
Translates to: NCNFRKGTNFLSMCSLSLLTQTS*GEKETK
Trigger: TTTAGTTTCCTTTTCCCCTCAAGATGTCTGAGTCAG...GAGACTTAAAGAACACATTGACAGGAAATTTGTTCCCTTCCGAAAGTTACAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CGACCAAACTGTAACTTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTATGCATTTCTAAATACTaGGCACAAGCAAATGGTCCT +
Preference number: 4 (lower is better)
Translates to: RPNCNFRKGTNFLSMCSLCISKY*AQANGP
Trigger: AGGACCATTTGCTTGTGCTCAGTATTTAGAAATGCA...TAAAGAACACATTGACAGGAAATTTGTTCCCTTCCGAAAGTTACAGTTTGGTCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR TCA 90 bp TTAAATGCCCAGAAGAGGAGTGGGTTATTCTTTTCAACTAGTATATCCTTCCTTGATCCAATGAGGTACTaGAGATGGATATACCTAACC +
Preference number: 4 (lower is better)
Translates to: LNAQKRSGLFFSTSISFLDPMRY*RWIYLT
Trigger: GGTTAGGTATATCCATCTTCAGTACCTCATTGGATC...AAGGAAGGATATACTAGTTGAAAAGAATAACCCACTCCTCTTCTGGGCATTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CCTGAGGCTAAGAACTGTATACTTCATTTAATCCCCCTAAAAACCCTTAGAAGTAGCCATAAGTTTGGGTaGGATTTTAGACTGAAGTGT +
Preference number: 4 (lower is better)
Translates to: PEAKNCILHLIPLKTLRSSHKFG*DFRLKC
Trigger: ACACTTCAGTCTAAAATCTCACCCAAACTTATGGCT...ACTTCTAAGGGTTTTTAGGGGGATTAAATGAAGTATACAGTTCTTAGCCTCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp ACTCCCAATTTGTTTAATGTTTTCGCTGCTAGTTGCAGTAATTCCTTTGCACTCAGCCATAAGTTTGGGTaGGATTTTAGACTGAAGTGT +
Preference number: 4 (lower is better)
Translates to: TPNLFNVFAASCSNSFALSHKFG*DFRLKC
Trigger: ACACTTCAGTCTAAAATCTCACCCAAACTTATGGCT...GAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAACATTAAACAAATTGGGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR TCA 90 bp ATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTCCATTTCTTGACTAGGTTTTaGGGGAATATTTCTCCTAAG +
Preference number: 4 (lower is better)
Translates to: ICFRKSLPAHSLRHSGFHFLTRF*GNISPK
Trigger: CTTAGGAGAAATATTCCCTCAAAACCTAGTCAAGAA...ATGGAAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp AGATGTCTTGGATTTCAGACACTCTTAAGACTTTGTACTTCAGGAAAGGATAAAATTGCCTTCCCTGAGTaGGATGTTAGAGGTGATCTA +
Preference number: 4 (lower is better)
Translates to: RCLGFQTLLRLCTSGKDKIAFPE*DVRGDL
Trigger: TAGATCACCTCTAACATCTCACTCAGGGAAGGCAAT...TTTATCCTTTCCTGAAGTACAAAGTCTTAAGAGTGTCTGAAATCCAAGACATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATGAAATTGCCTTCCCTGAGTaGGATGTTAGAGGTGATCTA +
Preference number: 4 (lower is better)
Translates to: HRTYTKGIAIELVCFTYEIAFPE*DVRGDL
Trigger: TAGATCACCTCTAACATCTCACTCAGGGAAGGCAAT...TTCATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR TCA 90 bp GTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACAGATTTCAGTCTGATGTaGAGCAGCTTAAAATGGCAT +
Preference number: 4 (lower is better)
Translates to: VTFSNLFSKKSTSPFPQTDFSLM*SSLKWH
Trigger: ATGCCATTTTAAGCTGCTTCACATCAGACTGAAATC...TGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR TCA 90 bp CGACCAAACTGTAACTTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAACAATGAAGTTGAATTaGGGCAGAACTCATGGTCTA +
Preference number: 4 (lower is better)
Translates to: RPNCNFRKGTNFLSMCSLTMKLN*GRTHGL
Trigger: TAGACCATGAGTTCTGCCTCAATTCAACTTCATTGT...TAAAGAACACATTGACAGGAAATTTGTTCCCTTCCGAAAGTTACAGTTTGGTCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642537.1
CDS-3UTR TCA 90 bp ATTTGTGGGTCTTGGGCACTTGACAGTTATATACTTCATTTTCGTATCCCTCGTTCAGCTTTTTATTCATaGGGCTGGCTGCATAAATTT +
Preference number: 4 (lower is better)
Translates to: ICGSWALDSYILHFRIPRSAFYS*GWLHKF
Trigger: AAATTTATGCAGCCAGCCTCATGAATAAAAAGCTGA...ACGAGGGATACGAAAATGAAGTATATAACTGTCAAGTGCCCAAGACCCACAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR TCA 90 bp CCATGTACTGAGCAGTGTGCCAGACACTGCAGATTTCTTACAATTTCTTACAATATAGTTATCATTCACTaGCCATCTACCATGTACTGT +
Preference number: 4 (lower is better)
Translates to: PCTEQCARHCRFLTISYNIVIIH*PSTMYC
Trigger: ACAGTACATGGTAGATGGTCAGTGAATGATAACTAT...ATTGTAAGAAATTGTAAGAAATCTGCAGTGTCTGGCACACTGCTCAGTACATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR TCA 90 bp TCCGGAATGGGTGGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTAGCTTATTCCTGCATTTaGTATCTTTGTCCATGGCCC +
Preference number: 4 (lower is better)
Translates to: SGMGGCKLLSLICFRKSLAYSCI*YLCPWP
Trigger: GGGCCATGGACAAAGATATCAAATGCAGGAATAAGC...TAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACCACCCATTCCGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS-3UTR TCA 90 bp AGTAACATGATAGAAAATCTGGGACTCACACCATCTGTCCAGACAGTTCTATCAGGTAAAATAAAGAGCTaGGATTCAACAGCAATCACA +
Preference number: 4 (lower is better)
Translates to: SNMIENLGLTPSVQTVLSGKIKS*DSTAIT
Trigger: TGTGATTGCTGTTGAATCTCAGCTCTTTATTTTACC...TGATAGAACTGTCTGGACAGATGGTGTGAGTCCCAGATTTTCTATCATGTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR GCA 90 bp TCCTTTAAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCCTCATTAGTCTGTGCTaGTCACTTGGTTGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: SFKHRTYTKGIAIELVCFLISLC*SLGCLL
Trigger: CAAAAGACAACCAAGTGAGCAGCACAGACTAATGAG...GAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTTAAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000675695.1
CDS-3UTR GCA 90 bp AAGGAGAGCTTTTCCCTTGTTTATGAGGTCACATGCCAGAAATTTGCTTTTTCTATACTGCAGTGCAAATaGAGTAAAGTCTCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: KESFSLVYEVTCQKFAFSILQCK*SKVSWN
Trigger: GTTCCAAGAGACTTTACTGCATTTGCACTGCAGTAT...AGAAAAAGCAAATTTCTGGCATGTGACCTCATAAACAAGGGAAAAGCTCTCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR GCA 90 bp CTGAAAGAATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGACTTCTTCTACAAAGTaGATTGGATCCTTTGGAATG +
Preference number: 4 (lower is better)
Translates to: LKECSSFFIPTLNKPRVWTSSTK*IGSFGM
Trigger: CATTCCAAAGGATCCAATGCACTTTGTAGAAGAAGT...CCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTCTTTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR GCA 90 bp GTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACAGTACTGCTGAAAGAATaGTCGAGCTTCTTTATACCT +
Preference number: 4 (lower is better)
Translates to: VTFSNLFSKKSTSPFPQTVLLKE*SSFFIP
Trigger: AGGTATAAAGAAGCTCGAGCATTCTTTCAGCAGTAC...TGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TACAGTACTGACAGTAGCTACTACTTACACAATACTTACAATGTGCCAGGTACTGTACTGCTGAAAGAATaGTCGAGCTTCTTTATACCT +
Preference number: 4 (lower is better)
Translates to: YSTDSSYYLHNTYNVPGTVLLKE*SSFFIP
Trigger: AGGTATAAAGAAGCTCGAGCATTCTTTCAGCAGTAC...AGTACCTGGCACATTGTAAGTATTGTGTAAGTAGTAGCTACTGTCAGTACTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR GCA 90 bp TTATATAGGAGCTTGTTAATGGGTCCCTACAAAATCTCTGTATTAGGTTGGGTTGTTTTCGCTGCTAGTTaGAGTAATTCCTTTGCACTC +
Preference number: 4 (lower is better)
Translates to: LYRSLLMGPYKISVLGWVVFAAS*SNSFAL
Trigger: GAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAAC...AACCCAACCTAATACAGAGATTTTGTAGGGACCCATTAACAAGCTCCTATATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000642952.1
CDS-3UTR GCA 90 bp TGTAACTTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGGTTTTCGCTGCTAGTTaGAGTAATTCCTTTGCACTC +
Preference number: 4 (lower is better)
Translates to: CNFRKGTNFLSMCSLSLKVFAAS*SNSFAL
Trigger: GAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAAC...CTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCCCTTCCGAAAGTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR GCA 90 bp GAATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCCAAAGGTTTTCATGTTaGTTTACAAATCCGGAATGG +
Preference number: 4 (lower is better)
Translates to: ECSSFFIPTLNKPRVWYFQRFSC*FTNPEW
Trigger: CCATTCCGGATTTGTAAAGCAACATGAAAACCTTTG...GAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000642537.1
ENST00000645933.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TCCGGAATGGGTGGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTAGGAGACATTCATGGGTaGCTAACTACCAACAAGTTG +
Preference number: 4 (lower is better)
Translates to: SGMGGCKLLSLICFRKSLGDIHG*LTTNKL
Trigger: CAACTTGTTGGTAGTTAGGCACCCATGAATGTCTCC...TAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACCACCCATTCCGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp CCAGAAACCACTCATGTTATTTATGAAAGACCCAATAATTCTGCATTGAGAATGGGAGACATTCATGGGTaGCTAACTACCAACAAGTTG +
Preference number: 4 (lower is better)
Translates to: PETTHVIYERPNNSALRMGDIHG*LTTNKL
Trigger: CAACTTGTTGGTAGTTAGGCACCCATGAATGTCTCC...CATTCTCAATGCAGAATTATTGGGTCTTTCATAAATAACATGAGTGGTTTCTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp GTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATCCTGCCTATCTATGTaGCATTTGAAGTACTGTAGT +
Preference number: 4 (lower is better)
Translates to: VTFSNLFSKKSTSPFPQTSCLSM*HLKYCS
Trigger: ACTACAGTACTTCAAATGGCACATAGATAGGCAGGA...TGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp AAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTCTCACCCTGCTGATTCTTaGCTAGTTGAGATAGAAACA +
Preference number: 4 (lower is better)
Translates to: KVFMLLYKSGMGGCKLLSHPADS*LVEIET
Trigger: TGTTTCTATCTCAACTAGGCAAGAATCAGCAGGGTG...AGAAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR GCA 90 bp TTATCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTAAAATGGCATCATaGACCCTGCTGATTCTTGCC +
Preference number: 4 (lower is better)
Translates to: LSKVFMLLYKSGMGGCKLLKMAS*TLLILA
Trigger: GGCAAGAATCAGCAGGGTGCATGATGCCATTTTAAG...TAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR GCA 90 bp CACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATGAACTTAAAATGGCATCATaGACCCTGCTGATTCTTGCC +
Preference number: 4 (lower is better)
Translates to: HRTYTKGIAIELVCFTYELKMAS*TLLILA
Trigger: GGCAAGAATCAGCAGGGTGCATGATGCCATTTTAAG...TTCATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
ENST00000644273.1
ENST00000675695.1
CDS-3UTR GCA 90 bp AAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATCTTAAAATGGCATCATaGACCCTGCTGATTCTTGCC +
Preference number: 4 (lower is better)
Translates to: KHRTYTKGIAIELVCFTYLKMAS*TLLILA
Trigger: GGCAAGAATCAGCAGGGTGCATGATGCCATTTTAAG...ATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
ENST00000644273.1
ENST00000675695.1
CDS-3UTR GCA 90 bp GCCAGAATGGTACTCCCAATTTGTTTAATGTTTTCGCTGCTAGTTGCAGTAATTATCATTTCCACTGTGTaGTATCAAATCCAATTCGGC +
Preference number: 4 (lower is better)
Translates to: ARMVLPICLMFSLLVAVIIISTV*YQIQFG
Trigger: GCCGAATTGGATTTGATAGCACACAGTGGAAATGAT...AATTACTGCAACTAGCAGCGAAAACATTAAACAAATTGGGAGTACCATTCTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642644.1
ENST00000645933.1
CDS-3UTR GCA 90 bp AAGAATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTATCATTTCCACTGTGTaGTATCAAATCCAATTCGGC +
Preference number: 4 (lower is better)
Translates to: KNARASLYLHSINLECGTIISTV*YQIQFG
Trigger: GCCGAATTGGATTTGATAGCACACAGTGGAAATGAT...AGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642644.1
ENST00000645933.1
ENST00000675232.1
CDS-3UTR GCA 90 bp AAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATCACCCTGCTGATTCTTaGCATAGTTGGCTTCAATGT +
Preference number: 4 (lower is better)
Translates to: KHRTYTKGIAIELVCFTYHPADS*HSWLQC
Trigger: ACATTGAAGCCAACTATGGCAAGAATCAGCAGGGTG...ATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000448551.6
ENST00000642952.1
ENST00000644273.1
CDS-3UTR GCA 90 bp GTCCTGAATGCGAGAGAGTGTGAAATTAGAGTTAGGGACAGAAAGGTAGAAGATACAAATACAACTGTGTaGTTTGAACATGGGAATAGT +
Preference number: 4 (lower is better)
Translates to: VLNARECEIRVRDRKVEDTNTTV*FEHGNS
Trigger: ACTATTCCCATGTTCAAAGCACACAGTTGTATTTGT...ATCTTCTACCTTTCTGTCCCTAACTCTAATTTCACACTCTCTCGCATTCAGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR GCA 90 bp AAACCTCAGATTTGTGGGTCTTGGGCACTTGACAGTTATATACTTCATTTTCGTAAAAAGAAAGGCGGCTaGTTGATGAGGTCTATTAGA +
Preference number: 4 (lower is better)
Translates to: KPQICGSWALDSYILHFRKKKGG*LMRSIR
Trigger: TCTAATAGACCTCATCAAGCAGCCGCCTTTCTTTTT...ACGAAAATGAAGTATATAACTGTCAAGTGCCCAAGACCCACAAATCTGAGGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR GCA 90 bp AATGCAGTAAAGTCTCTTGGAACACAGAAAAACTTGCATTGTGAAGTAGAGCCAAAAAAGAAAGGCGGCTaGTTGATGAGGTCTATTAGA +
Preference number: 4 (lower is better)
Translates to: NAVKSLGTQKNLHCEVEPKKKGG*LMRSIR
Trigger: TCTAATAGACCTCATCAAGCAGCCGCCTTTCTTTTT...TGGCTCTACTTCACAATGCAAGTTTTTCTGTGTTCCAAGAGACTTTACTGCATT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000675232.1
ENST00000676192.1
CDS-3UTR CCA 90 bp TCCGGAATGGGTGGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTAAGTGGATCGCATGAGTaGCCAGTTTGCAGATATAGT +
Preference number: 4 (lower is better)
Translates to: SGMGGCKLLSLICFRKSLSGSHE*PVCRYS
Trigger: ACTATATCTGCAAACTGGCCACTCATGCGATCCACT...TAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACCACCCATTCCGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp AAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATGTGCATTGGATCCTTTaGAATGAGAACTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: KHRTYTKGIAIELVCFTYVHWIL*NENFQS
Trigger: GGACTGGAAGTTCTCATTCCAAAGGATCCAATGCAC...ATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
ENST00000675695.1
CDS-3UTR CCA 90 bp TCCGGAATGGGTGGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTAGTGCATTGGATCCTTTaGAATGAGAACTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: SGMGGCKLLSLICFRKSLVHWIL*NENFQS
Trigger: GGACTGGAAGTTCTCATTCCAAAGGATCCAATGCAC...TAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACCACCCATTCCGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GCCTCCTTTAAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCTACAAAGTGCATTaGATCCTTTGGAATGAGAAC +
Preference number: 4 (lower is better)
Translates to: ASFKHRTYTKGIAIELVCFYKVH*ILWNEN
Trigger: GTTCTCATTCCAAAGGATCCAATGCACTTTGTAGAA...ACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTTAAAGGAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
ENST00000675695.1
CDS-3UTR CCA 90 bp GACTCCACAATCTTAAAAGTAGCACTAACATACCAGCTTAAATGCCCAGAAGAGTTCTACAAAGTGCATTaGATCCTTTGGAATGAGAAC +
Preference number: 4 (lower is better)
Translates to: DSTILKVALTYQLKCPEEFYKVH*ILWNEN
Trigger: GTTCTCATTCCAAAGGATCCAATGCACTTTGTAGAA...CTCTTCTGGGCATTTAAGCTGGTATGTTAGTGCTACTTTTAAGATTGTGGAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp AGTAACATGATAGAAAATCTGGGACTCACACCATCTGTCCAGACAGTTCTATCATTCTACAAAGTGCATTaGATCCTTTGGAATGAGAAC +
Preference number: 4 (lower is better)
Translates to: SNMIENLGLTPSVQTVLSFYKVH*ILWNEN
Trigger: GTTCTCATTCCAAAGGATCCAATGCACTTTGTAGAA...TGATAGAACTGTCTGGACAGATGGTGTGAGTCCCAGATTTTCTATCATGTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR CCA 90 bp GCTACAGATACATCATTTGCAGCATCACACCATGCTCTAGATAATTCTCTGGTCAATAAACCTAGAGTGTaGTACTTCTTCTACAAAGTG +
Preference number: 4 (lower is better)
Translates to: ATDTSFAASHHALDNSLVNKPRV*YFFYKV
Trigger: CACTTTGTAGAAGAAGTACCACACTCTAGGTTTATT...GACCAGAGAATTATCTAGAGCATGGTGTGATGCTGCAAATGATGTATCTGTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR CCA 90 bp CAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTACATCATCTTTTCCCTaGAAGGATAGTTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: QRFSCCFTNPEWVVVSYFTSSFP*KDSSKL
Trigger: CAGCTTGGAACTATCCTTCCAGGGAAAAGATGATGT...AAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000457847.1
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp ATGGGTGGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCACATCATCTTTTCCCTaGAAGGATAGTTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: MGGCKLLSLICFRKSLPATSSFP*KDSSKL
Trigger: CAGCTTGGAACTATCCTTCCAGGGAAAAGATGATGT...GGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACCACCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000457847.1
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTCTCTAACATCATCTTTTCCCTaGAAGGATAGTTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: VFMLLYKSGMGGCKLLSLTSSFP*KDSSKL
Trigger: CAGCTTGGAACTATCCTTCCAGGGAAAAGATGATGT...TAGAGAAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000457847.1
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCACATCATCTTTTCCCTaGAAGGATAGTTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: CKLLSLICFRKSLPAHSLTSSFP*KDSSKL
Trigger: CAGCTTGGAACTATCCTTCCAGGGAAAAGATGATGT...GAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TTATATAGGAGCTTGTTAATGGGTCCCTACAAAATCTCTGTATTAGGTTGGGTTACATCATCTTTTCCCTaGAAGGATAGTTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: LYRSLLMGPYKISVLGWVTSSFP*KDSSKL
Trigger: CAGCTTGGAACTATCCTTCCAGGGAAAAGATGATGT...AACCCAACCTAATACAGAGATTTTGTAGGGACCCATTAACAAGCTCCTATATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000642952.1
ENST00000675695.1
CDS-3UTR CCA 90 bp GTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTCTCTAGTTTCACAGGGTACATaGACCTTCATGTCTACAAAC +
Preference number: 4 (lower is better)
Translates to: VFMLLYKSGMGGCKLLSLVSQGT*TFMSTN
Trigger: GTTTGTAGACATGAAGGTCCATGTACCCTGTGAAAC...TAGAGAAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000457847.1
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TGTAACTTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGGTTTCACAGGGTACATaGACCTTCATGTCTACAAAC +
Preference number: 4 (lower is better)
Translates to: CNFRKGTNFLSMCSLSLKVSQGT*TFMSTN
Trigger: GTTTGTAGACATGAAGGTCCATGTACCCTGTGAAAC...CTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCCCTTCCGAAAGTTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
CDS-3UTR CCA 90 bp ATGGGTGGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCGTTTCACAGGGTACATaGACCTTCATGTCTACAAAC +
Preference number: 4 (lower is better)
Translates to: MGGCKLLSLICFRKSLPAVSQGT*TFMSTN
Trigger: GTTTGTAGACATGAAGGTCCATGTACCCTGTGAAAC...GGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACCACCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000457847.1
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TGGTTTTATGATAGAAGATACCTTTCAAACTTCTGGCTTCTACCCATACCAGTTGTTTCACAGGGTACATaGACCTTCATGTCTACAAAC +
Preference number: 4 (lower is better)
Translates to: WFYDRRYLSNFWLLPIPVVSQGT*TFMSTN
Trigger: GTTTGTAGACATGAAGGTCCATGTACCCTGTGAAAC...AACTGGTATGGGTAGAAGCCAGAAGTTTGAAAGGTATCTTCTATCATAAAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
CDS-3UTR CCA 90 bp CAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTGTTTCACAGGGTACATaGACCTTCATGTCTACAAAC +
Preference number: 4 (lower is better)
Translates to: QRFSCCFTNPEWVVVSYFVSQGT*TFMSTN
Trigger: GTTTGTAGACATGAAGGTCCATGTACCCTGTGAAAC...AAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000457847.1
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCAGGTCTTACCATAGTTaGCTTCAATGTATTCGAGGG +
Preference number: 4 (lower is better)
Translates to: GCKLLSLICFRKSLPAHSRSYHS*LQCIRG
Trigger: CCCTCGAATACATTGAAGCCAACTATGGTAAGACCT...GGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GCACTAACATACCAGCTTAAATGCCCAGAAGAGGAGTGGGTTATTCTTTTCAACAGTTTTGTGAAATCATaGCCTCTTTCAAGATCATGT +
Preference number: 4 (lower is better)
Translates to: ALTYQLKCPEEEWVILFNSFVKS*PLSRSC
Trigger: ACATGATCTTGAAAGAGGCCATGATTTCACAAAACT...GTTGAAAAGAATAACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGTTAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp CCTGAGGCTAAGAACTGTATACTTCATTTAATCCCCCTAAAAACCCTTAGAAGTAACAGACTGAAAAACTaGGGAGGGACACAAACTTTA +
Preference number: 4 (lower is better)
Translates to: PEAKNCILHLIPLKTLRSNRLKN*GGTQTL
Trigger: TAAAGTTTGTGTCCCTCCCCAGTTTTTCAGTCTGTT...ACTTCTAAGGGTTTTTAGGGGGATTAAATGAAGTATACAGTTCTTAGCCTCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCGATATAAGAGAGAGATaGGGTAAACAGCATCCTAGC +
Preference number: 4 (lower is better)
Translates to: GCKLLSLICFRKSLPAHSDIRER*GKQHPS
Trigger: GCTAGGATGCTGTTTACCCCATCTCTCTCTTATATC...GGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp AGGAGCTTGTTAATGGGTCCCTACAAAATCTCTGTATTAGGTTGGGTTAGAAGGTTTACAAATCCGGAATaGGTGGTTGTAAGTTACTTT +
Preference number: 4 (lower is better)
Translates to: RSLLMGPYKISVLGWVRRFTNPE*VVVSYF
Trigger: AAAGTAACTTACAACCACCCATTCCGGATTTGTAAA...CCTTCTAACCCAACCTAATACAGAGATTTTGTAGGGACCCATTAACAAGCTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000675695.1
CDS-3UTR CCA 90 bp GGGAGTCCCAATTGGAAATGGGGAGAAATGTGGAGTGTATGCATTTCTAAATACTTTACAAATCCGGAATaGGTGGTTGTAAGTTACTTT +
Preference number: 4 (lower is better)
Translates to: GSPNWKWGEMWSVCISKYFTNPE*VVVSYF
Trigger: AAAGTAACTTACAACCACCCATTCCGGATTTGTAAA...GTATTTAGAAATGCATACACTCCACATTTCTCCCCATTTCCAATTGGGACTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGAACCTGTGTCAATTaGGCCAAGATGTCTTGGATT +
Preference number: 4 (lower is better)
Translates to: CKLLSLICFRKSLPAHSLRTCVN*AKMSWI
Trigger: AATCCAAGACATCTTGGCCCAATTGACACAGGTTCT...GAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TTATCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTCTGGAGACATTCATaGGTGCCTAACTACCAACAA +
Preference number: 4 (lower is better)
Translates to: LSKVFMLLYKSGMGGCKLLWRHS*VPNYQQ
Trigger: TTGTTGGTAGTTAGGCACCCATGAATGTCTCCAGAG...TAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp AAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATGACTGGGTGACTACCTaGTTGTCCTGGTTATCAATT +
Preference number: 4 (lower is better)
Translates to: KHRTYTKGIAIELVCFTYDWVTT*LSWLSI
Trigger: AATTGATAACCAGGACAACCAGGTAGTCACCCAGTC...ATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR CCA 90 bp AGCAAACTAGGTAGCATATGGGATAATATTAGGAGACAACTGCTTAACCAAGAACTTGTGGTCTTTTTATaGCAACACATTGCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: SKLGSIWDNIRRQLLNQELVVFL*QHIAFP
Trigger: AGGGAAGGCAATGTGTTGCCATAAAAAGACCACAAG...TTCTTGGTTAAGCAGTTGTCTCCTAATATTATCCCATATGCTACCTAGTTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTTGTAGTTATGAAGTaGGAGGGACACACAAATAGC +
Preference number: 4 (lower is better)
Translates to: VTFSNLFSKKSTSPFPQTFVVMK*EGHTNS
Trigger: GCTATTTGTGTGTCCCTCCCACTTCATAACTACAAA...TGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000675695.1
CDS-3UTR CCA 90 bp TGGTTTTATGATAGAAGATACCTTTCAAACTTCTGGCTTCTACCCATACCAGTTGATTCTTGCCATAGTTaGCTTCAATGTATTCGAGGG +
Preference number: 4 (lower is better)
Translates to: WFYDRRYLSNFWLLPIPVDSCHS*LQCIRG
Trigger: CCCTCGAATACATTGAAGCCAACTATGGCAAGAATC...AACTGGTATGGGTAGAAGCCAGAAGTTTGAAAGGTATCTTCTATCATAAAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642952.1
CDS-3UTR CCA 90 bp GGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTTCCTTTCCATAGTTaGCTTCAATGTATTCGAGGG +
Preference number: 4 (lower is better)
Translates to: GCKLLSLICFRKSLPAHSLPFHS*LQCIRG
Trigger: CCCTCGAATACATTGAAGCCAACTATGGAAAGGAAG...GGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000457847.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
CDS-3UTR CCA 90 bp TCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTCTTCCTTTCCATAGTTaGCTTCAATGTATTCGAGGG +
Preference number: 4 (lower is better)
Translates to: SKVFMLLYKSGMGGCKLLLPFHS*LQCIRG
Trigger: CCCTCGAATACATTGAAGCCAACTATGGAAAGGAAG...AAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000457847.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
CDS-3UTR CCA 90 bp CAGAATGGTACTCCCAATTTGTTTAATGTTTTCGCTGCTAGTTGCAGTAATTCCTACCTTTCAAACTTCTaGCTTCTACCCATACCAGTT +
Preference number: 4 (lower is better)
Translates to: QNGTPNLFNVFAASCSNSYLSNF*LLPIPV
Trigger: AACTGGTATGGGTAGAAGCCAGAAGTTTGAAAGGTA...GGAATTACTGCAACTAGCAGCGAAAACATTAAACAAATTGGGAGTACCATTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
CDS-3UTR CCA 90 bp GTCTCTAACCTGAAAGAATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTGCCCATCCACACATGTaGTTTTTCAGCTTTTTATTC +
Preference number: 4 (lower is better)
Translates to: VSNLKECSSFFIPTLNKPAHPHM*FFSFLF
Trigger: GAATAAAAAGCTGAAAAACCACATGTGTGGATGGGC...AGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTCTTTCAGGTTAGAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CCA 90 bp CACCAAGCATTACATTTAAGACTGTTTGGCGCCATCAAGTGTTCAAATACATGTGCCCATCCACACATGTaGTTTTTCAGCTTTTTATTC +
Preference number: 4 (lower is better)
Translates to: HQALHLRLFGAIKCSNTCAHPHM*FFSFLF
Trigger: GAATAAAAAGCTGAAAAACCACATGTGTGGATGGGC...ACATGTATTTGAACACTTGATGGCGCCAAACAGTCTTAAATGTAATGCTTGGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CCA 90 bp GATAACGACCAAACTGTAACTTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTGCCCATCCACACATGTaGTTTTTCAGCTTTTTATTC +
Preference number: 4 (lower is better)
Translates to: DNDQTVTFGREQISCQCVAHPHM*FFSFLF
Trigger: GAATAAAAAGCTGAAAAACCACATGTGTGGATGGGC...AACACATTGACAGGAAATTTGTTCCCTTCCGAAAGTTACAGTTTGGTCGTTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CCA 90 bp CATTTCAAATATTCAGTAGTCATGTGGCTAGTGGCTACAGATACATCATTTGCAACATGGGGAAAAAGATaGCTCCTTCCACTAAGACAT +
Preference number: 4 (lower is better)
Translates to: HFKYSVVMWLVATDTSFATWGKR*LLPLRH
Trigger: ATGTCTTAGTGGAAGGAGCCATCTTTTTCCCCATGT...TGCAAATGATGTATCTGTAGCCACTAGCCACATGACTACTGAATATTTGAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR CCA 90 bp AGTAACATGATAGAAAATCTGGGACTCACACCATCTGTCCAGACAGTTCTATCAAATAAAAATGGCATATaGCTGGGGGAATCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: SNMIENLGLTPSVQTVLSNKNGI*LGESSK
Trigger: TTTGGAAGATTCCCCCAGCCATATGCCATTTTTATT...TGATAGAACTGTCTGGACAGATGGTGTGAGTCCCAGATTTTCTATCATGTTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR CCA 90 bp GTCAGGGTCAAGCAGAGATTCTATAACTCACCTTCTAAACACATCCTCCAAGTTAAACCTAAAAAGTCTTaGCAGGACTTGTTCTTAGTA +
Preference number: 4 (lower is better)
Translates to: VRVKQRFYNSPSKHILQVKPKKS*QDLFLV
Trigger: TACTAAGAACAAGTCCTGCCAAGACTTTTTAGGTTT...AACTTGGAGGATGTGTTTAGAAGGTGAGTTATAGAATCTCTGCTTGACCCTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674767.1
3UTR CAA 72 bp GATACCTTTCAAACTTCTGGCTTCTACCCATACCAGTaGATTCAAAATGGGAAGGAAAGAAGCAAACCAAAT +
Preference number: 4 (lower is better)
Translates to: DTFQTSGFYPYQ*IQNGKERSKPN
Trigger: ATTTGGTTTGCTTCTTTCCTTCCCATTTTGAATCAACTGGTATGGGTAGAAGCCAGAAGTTTGAAAGGTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
3UTR CAA 72 bp GGTATCTTTCAAACTTCTGGCTTCTACCCATACCAGTaGATTCAAAATGGGAAGGAAAGAAGCAAACCAAAT +
Preference number: 4 (lower is better)
Translates to: GIFQTSGFYPYQ*IQNGKERSKPN
Trigger: ATTTGGTTTGCTTCTTTCCTTCCCATTTTGAATCAACTGGTATGGGTAGAAGCCAGAAGTTTGAAAGATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
3UTR CAA 72 bp GCTGAGAAAAAGAATTGTGGTAACAGGGTAGCAAGATaGGAAATGGATGATGCTAAACGAAACAATAAGCTG +
Preference number: 4 (lower is better)
Translates to: AEKKNCGNRVAR*EMDDAKRNNKL
Trigger: CAGCTTATTGTTTCGTTTAGCATCATCCATTTCCAATCTTGCTACCCTGTTACCACAATTCTTTTTCTCAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR TCA 90 bp CACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATGAAGCTTCCTTTGGATTTTaGCAAACCAGCTCCATTCTT +
Preference number: 4 (lower is better)
Translates to: HRTYTKGIAIELVCFTYEASFGF*QTSSIL
Trigger: AAGAATGGAGCTGGTTTGTCAAAATCCAAAGGAAGC...TTCATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000675695.1
CDS-3UTR TCA 90 bp GTATATCATGCTTACCTTTATCCTCAGAATACCCTAAATTCACAGAGCAAAACAGCTTCCTTTGGATTTTaGCAAACCAGCTCCATTCTT +
Preference number: 4 (lower is better)
Translates to: VYHAYLYPQNTLNSQSKTASFGF*QTSSIL
Trigger: AAGAATGGAGCTGGTTTGTCAAAATCCAAAGGAAGC...TGTTTTGCTCTGTGAATTTAGGGTATTCTGAGGATAAAGGTAAGCATGATATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674767.1
CDS-3UTR TCA 90 bp AAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATGCTTCCTTTGGATTTTaGCAAACCAGCTCCATTCTT +
Preference number: 4 (lower is better)
Translates to: KHRTYTKGIAIELVCFTYASFGF*QTSSIL
Trigger: AAGAATGGAGCTGGTTTGTCAAAATCCAAAGGAAGC...ATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000675695.1
CDS-3UTR TCA 90 bp ATTTATCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTCATTCTTCCATAGGTaGTACTGCAGTGCAAATGCA +
Preference number: 4 (lower is better)
Translates to: IYQRFSCCFTNPEWVVVSSFFHR*YCSANA
Trigger: TGCATTTGCACTGCAGTATCACCTATGGAAGAATGA...ACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGATAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATGAATCATTCTTCCATAGGTaGTACTGCAGTGCAAATGCA +
Preference number: 4 (lower is better)
Translates to: HRTYTKGIAIELVCFTYESFFHR*YCSANA
Trigger: TGCATTTGCACTGCAGTATCACCTATGGAAGAATGA...TTCATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
ENST00000675695.1
CDS-3UTR TCA 90 bp TTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCTACAAAGTGTCATTCTTCCATAGGTaGTACTGCAGTGCAAATGCA +
Preference number: 4 (lower is better)
Translates to: FFIPTLNKPRVWYFFYKVSFFHR*YCSANA
Trigger: TGCATTTGCACTGCAGTATCACCTATGGAAGAATGA...CACTTTGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR TCA 90 bp TCCGGAATGGGTGGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTATCATTCTTCCATAGGTaGTACTGCAGTGCAAATGCA +
Preference number: 4 (lower is better)
Translates to: SGMGGCKLLSLICFRKSLSFFHR*YCSANA
Trigger: TGCATTTGCACTGCAGTATCACCTATGGAAGAATGA...TAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACCACCCATTCCGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GCCAGAAAGGTAATAATTGTTGGTAACTTGCTACTAATGACTGACCTGGTTTTATCAATCTTTAGGCACTaGAATCCCATATTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: ARKVIIVGNLLLMTDLVLSIFRH*NPIFSA
Trigger: AGCTGAGAATATGGGATTTCAGTGCCTAAAGATTGA...TAAAACCAGGTCAGTCATTAGTAGCAAGTTACCAACAATTATTACCTTTCTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
CDS-3UTR TCA 90 bp AACTGTAACTTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCTCAATCTTTAGGCACTaGAATCCCATATTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: NCNFRKGTNFLSMCSLSLSIFRH*NPIFSA
Trigger: AGCTGAGAATATGGGATTTCAGTGCCTAAAGATTGA...GAGACTTAAAGAACACATTGACAGGAAATTTGTTCCCTTCCGAAAGTTACAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR TCA 90 bp CACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATGAATTGGATCCTTTGGAATaGGAACTTCCAGTCCATCAA +
Preference number: 4 (lower is better)
Translates to: HRTYTKGIAIELVCFTYELDPLE*ELPVHQ
Trigger: TTGATGGACTGGAAGTTCTCATTCCAAAGGATCCAA...TTCATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
ENST00000675695.1
CDS-3UTR TCA 90 bp TCCGGAATGGGTGGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTATTGGATCCTTTGGAATaGGAACTTCCAGTCCATCAA +
Preference number: 4 (lower is better)
Translates to: SGMGGCKLLSLICFRKSLLDPLE*ELPVHQ
Trigger: TTGATGGACTGGAAGTTCTCATTCCAAAGGATCCAA...TAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACCACCCATTCCGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp AAAAGAAGTAGGTATTTGTCTCATTCATCTAGGCTTCTCCACTGTAACCTAGCAATTGTATGTGGCACATaGAAATTCCTCAGTACTAAG +
Preference number: 4 (lower is better)
Translates to: KRSRYLSHSSRLLHCNLAIVCGT*KFLSTK
Trigger: CTTAGTACTGAGGAATTTTCATGTGCCACATACAAT...TGCTAGGTTACAGTGGAGAAGCCTAGATGAATGAGACAAATACCTACTTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp TCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTATTGTATGTGGCACATaGAAATTCCTCAGTACTAAG +
Preference number: 4 (lower is better)
Translates to: SNLFSKKSTSPFPQTFRFIVCGT*KFLSTK
Trigger: CTTAGTACTGAGGAATTTTCATGTGCCACATACAAT...AAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CCTGAGGCTAAGAACTGTATACTTCATTTAATCCCCCTAAAAACCCTTAGAAGTCAAAGTCTGATCACTTaGATATTAACTCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: PEAKNCILHLIPLKTLRSQSLIT*ILTQTP
Trigger: TGGAGTCTGAGTTAATATTCAAGTGATCAGACTTTG...ACTTCTAAGGGTTTTTAGGGGGATTAAATGAAGTATACAGTTCTTAGCCTCAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp AAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTCTATGGTCTCACTTGAATaGTTTGTCAACAAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: KVFMLLYKSGMGGCKLLSMVSLE*FVNKCH
Trigger: ATGGCACTTGTTGACAAATCATTCAAGTGAGACCAT...AGAAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp TCCTTTAAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACAAACTCTATGATCTaGGGTAGGGTGAATAGTTGT +
Preference number: 4 (lower is better)
Translates to: SFKHRTYTKGIAIELVCFTNSMI*GRVNSC
Trigger: ACAACTATTCACCCTACCTCAGATCATAGAGTTTGT...GAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTTAAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR TCA 90 bp CAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTGTGATGAAAGAAAAGTaGTCCAATGAGGTACTGAAG +
Preference number: 4 (lower is better)
Translates to: QRFSCCFTNPEWVVVSYFVMKEK*SNEVLK
Trigger: CTTCAGTACCTCATTGGATCACTTTTCTTTCATCAC...AAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp TTAAATGCCCAGAAGAGGAGTGGGTTATTCTTTTCAACTAGTATATCCTTCCTTGTCAGATTAGGAGAATaGCTGCTAGAATACTCAAGT +
Preference number: 4 (lower is better)
Translates to: LNAQKRSGLFFSTSISFLVRLGE*LLEYSS
Trigger: ACTTGAGTATTCTAGCAGTCATTCTCCTAATCTGAC...AAGGAAGGATATACTAGTTGAAAAGAATAACCCACTCCTCTTCTGGGCATTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp AGAGGAAAATCTGCCAAGCTCCAGAAAGTAGTCCTAAATAGCATAGATAAGATAGTCAGATTAGGAGAATaGCTGCTAGAATACTCAAGT +
Preference number: 4 (lower is better)
Translates to: RGKSAKLQKVVLNSIDKIVRLGE*LLEYSS
Trigger: ACTTGAGTATTCTAGCAGTCATTCTCCTAATCTGAC...TATCTTATCTATGCTATTTAGGACTACTTTCTGGAGCTTGGCAGATTTTCCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp GTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTCTCTAAGCCATAAGTTTGGGTaGGATTTTAGACTGAAGTGT +
Preference number: 4 (lower is better)
Translates to: VFMLLYKSGMGGCKLLSLSHKFG*DFRLKC
Trigger: ACACTTCAGTCTAAAATCTCACCCAAACTTATGGCT...TAGAGAAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CGACCAAACTGTAACTTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTACTTTCAACCCTACTGTaGGAGCTGCTTATAATTATA +
Preference number: 4 (lower is better)
Translates to: RPNCNFRKGTNFLSMCSLLSTLL*ELLIII
Trigger: TATAATTATAAGCAGCTCTCACAGTAGGGTTGAAAG...TAAAGAACACATTGACAGGAAATTTGTTCCCTTCCGAAAGTTACAGTTTGGTCG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642952.1
CDS-3UTR TCA 90 bp TTATCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTATTCCCCATGCTTTaGATGAATCATCAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: LSKVFMLLYKSGMGGCKLLFPML*MNHQKA
Trigger: AGCCTTCTGATGATTCATTCAAAGCATGGGGAATAG...TAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000675695.1
CDS-3UTR TCA 90 bp TTATCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTAATAGCTCCTCTCAAATaGCACTTCTTCAAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: LSKVFMLLYKSGMGGCKLIAPLK*HFFKEV
Trigger: GACTTCCTTGAAGAAGTGTCATTTGAGAGGAGCTAT...TAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS-3UTR TCA 90 bp AGAGGAAAATCTGCCAAGCTCCAGAAAGTAGTCCTAAATAGCATAGATAAGATAACAATGAAGTTGAATTaGGGCAGAACTCATGGTCTA +
Preference number: 4 (lower is better)
Translates to: RGKSAKLQKVVLNSIDKITMKLN*GRTHGL
Trigger: TAGACCATGAGTTCTGCCTCAATTCAACTTCATTGT...TATCTTATCTATGCTATTTAGGACTACTTTCTGGAGCTTGGCAGATTTTCCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642177.1
ENST00000642537.1
CDS-3UTR TCA 90 bp TTCACACTTCCCAAACACTGCTACTATAAAGAGCTGTTAAAGCAGAATGAAAGAAATGAACAGTTCTTTTaGGGTTTGCAGGTTTCGGAT +
Preference number: 4 (lower is better)
Translates to: FTLPKHCYYKELLKQNERNEQFF*GLQVSD
Trigger: ATCCGAAACCTGCAAACCTCAAAAGAACTGTTCATT...TCTTTCATTCTGCTTTAACAGCTCTTTATAGTAGCAGTGTTTGGGAAGTGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR TCA 90 bp TTCACACTTCCCAAACACTGCTACTATAAAGAGCTGTTAAAGCAGAATGAAAGAGCTGTTAAAGCAGAATaGAAGAAGCTTTTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: FTLPKHCYYKELLKQNERAVKAE*KKLFLS
Trigger: GGAGAGAAAAAGCTTCTTTCATTCTGCTTTAACAGC...TCTTTCATTCTGCTTTAACAGCTCTTTATAGTAGCAGTGTTTGGGAAGTGTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR TCA 90 bp TACAGTACTGACAGTAGCTACTACTTACACAATACTTACAATGTGCCAGGTACTAGATACATAGCTATGTaGGGAAAAGAACATACAGAC +
Preference number: 4 (lower is better)
Translates to: YSTDSSYYLHNTYNVPGTRYIAM*GKEHTD
Trigger: GTCTGTATGTTCTTTTCCTCACATAGCTATGTATCT...AGTACCTGGCACATTGTAAGTATTGTGTAAGTAGTAGCTACTGTCAGTACTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR TCA 90 bp GTATATCATGCTTACCTTTATCCTCAGAATACCCTAAATTCACAGAGCAAAACAAGCAATGATCTAAAATaGCCACTGCTTGGTGATCTG +
Preference number: 4 (lower is better)
Translates to: VYHAYLYPQNTLNSQSKTSNDLK*PLLGDL
Trigger: CAGATCACCAAGCAGTGGTCATTTTAGATCATTGCT...TGTTTTGCTCTGTGAATTTAGGGTATTCTGAGGATAAAGGTAAGCATGATATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674767.1
CDS-3UTR TCA 90 bp TGTACTTTCTCTGACTGCTCTCTCTATTTACTAAAAGGTTTGGGAATGTTGTCAAACCTGTACTTTCTCTaGCTGCTCTCTCTATTTACT +
Preference number: 4 (lower is better)
Translates to: CTFSDCSLYLLKGLGMLSNLYFL*LLSLFT
Trigger: AGTAAATAGAGAGAGCAGTCAGAGAAAGTACAGGTT...TGACAACATTCCCAAACCTTTTAGTAAATAGAGAGAGCAGTCAGAGAAAGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674767.1
CDS-3UTR GCA 90 bp CCAGAAACCACTCATGTTATTTATGAAAGACCCAATAATTCTGCATTGAGAATGCTCATTAGTCTGTGCTaGTCACTTGGTTGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: PETTHVIYERPNNSALRMLISLC*SLGCLL
Trigger: CAAAAGACAACCAAGTGAGCAGCACAGACTAATGAG...CATTCTCAATGCAGAATTATTGGGTCTTTCATAAATAACATGAGTGGTTTCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TTATATAGGAGCTTGTTAATGGGTCCCTACAAAATCTCTGTATTAGGTTGGGTTATACTGCAGTGCAAATaGAGTAAAGTCTCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: LYRSLLMGPYKISVLGWVILQCK*SKVSWN
Trigger: GTTCCAAGAGACTTTACTGCATTTGCACTGCAGTAT...AACCCAACCTAATACAGAGATTTTGTAGGGACCCATTAACAAGCTCCTATATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000642952.1
ENST00000675695.1
CDS-3UTR GCA 90 bp TCCTTTAAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCATACTGCAGTGCAAATaGAGTAAAGTCTCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: SFKHRTYTKGIAIELVCFILQCK*SKVSWN
Trigger: GTTCCAAGAGACTTTACTGCATTTGCACTGCAGTAT...GAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTTAAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
ENST00000675695.1
CDS-3UTR GCA 90 bp AGAATGGTACTCCCAATTTGTTTAATGTTTTCGCTGCTAGTTGCAGTAATTCCTATACTGCAGTGCAAATaGAGTAAAGTCTCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: RMVLPICLMFSLLVAVIPILQCK*SKVSWN
Trigger: GTTCCAAGAGACTTTACTGCATTTGCACTGCAGTAT...AGGAATTACTGCAACTAGCAGCGAAAACATTAAACAAATTGGGAGTACCATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR GCA 90 bp TTTCAAATATTCAGTAGTCATGTGGCTAGTGGCTACAGATACATCATTTGCAGCACTTCTTCTACAAAGTaGATTGGATCCTTTGGAATG +
Preference number: 4 (lower is better)
Translates to: FQIFSSHVASGYRYIICSTSSTK*IGSFGM
Trigger: CATTCCAAAGGATCCAATGCACTTTGTAGAAGAAGT...GCTGCAAATGATGTATCTGTAGCCACTAGCCACATGACTACTGAATATTTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR GCA 90 bp TCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTACTTCTTCTACAAAGTaGATTGGATCCTTTGGAATG +
Preference number: 4 (lower is better)
Translates to: SNLFSKKSTSPFPQTFRFTSSTK*IGSFGM
Trigger: CATTCCAAAGGATCCAATGCACTTTGTAGAAGAAGT...AAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp GCCAGAATGGTACTCCCAATTTGTTTAATGTTTTCGCTGCTAGTTGCAGTAATTACTTCTTCTACAAAGTaGATTGGATCCTTTGGAATG +
Preference number: 4 (lower is better)
Translates to: ARMVLPICLMFSLLVAVITSSTK*IGSFGM
Trigger: CATTCCAAAGGATCCAATGCACTTTGTAGAAGAAGT...AATTACTGCAACTAGCAGCGAAAACATTAAACAAATTGGGAGTACCATTCTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR GCA 90 bp AGAATGGTACTCCCAATTTGTTTAATGTTTTCGCTGCTAGTTGCAGTAATTCCTGTACTGCTGAAAGAATaGTCGAGCTTCTTTATACCT +
Preference number: 4 (lower is better)
Translates to: RMVLPICLMFSLLVAVIPVLLKE*SSFFIP
Trigger: AGGTATAAAGAAGCTCGAGCATTCTTTCAGCAGTAC...AGGAATTACTGCAACTAGCAGCGAAAACATTAAACAAATTGGGAGTACCATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR GCA 90 bp CATTTCAAATATTCAGTAGTCATGTGGCTAGTGGCTACAGATACATCATTTGCAGTACTGCTGAAAGAATaGTCGAGCTTCTTTATACCT +
Preference number: 4 (lower is better)
Translates to: HFKYSVVMWLVATDTSFAVLLKE*SSFFIP
Trigger: AGGTATAAAGAAGCTCGAGCATTCTTTCAGCAGTAC...TGCAAATGATGTATCTGTAGCCACTAGCCACATGACTACTGAATATTTGAAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR GCA 90 bp CACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATGAAGTTTTCGCTGCTAGTTaGAGTAATTCCTTTGCACTC +
Preference number: 4 (lower is better)
Translates to: HRTYTKGIAIELVCFTYEVFAAS*SNSFAL
Trigger: GAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAAC...TTCATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
CDS-3UTR GCA 90 bp AGATTGGAAATGGATGATGCTAAACGAAACAATAAGCTGTCAAATAGGATCTGTGTTTTCGCTGCTAGTTaGAGTAATTCCTTTGCACTC +
Preference number: 4 (lower is better)
Translates to: RLEMDDAKRNNKLSNRICVFAAS*SNSFAL
Trigger: GAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAAC...ACAGATCCTATTTGACAGCTTATTGTTTCGTTTAGCATCATCCATTTCCAATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR GCA 90 bp AAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTCTAAAGTGGCAATGGGATaGATCTTGAGCTTAGAGAAT +
Preference number: 4 (lower is better)
Translates to: KVFMLLYKSGMGGCKLLSKVAMG*ILSLEN
Trigger: ATTCTCTAAGCTCAAGATGCATCCCATTGCCACTTT...AGAAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp CCAGAAACCACTCATGTTATTTATGAAAGACCCAATAATTCTGCATTGAGAATGCTTAGCTTCTCAAACTaGTGGTATTACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: PETTHVIYERPNNSALRMLSFSN*WYYRCE
Trigger: CTCACACCTGTAATACCAGCAGTTTGAGAAGCTAAG...CATTCTCAATGCAGAATTATTGGGTCTTTCATAAATAACATGAGTGGTTTCTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR GCA 90 bp AGTAACATGATAGAAAATCTGGGACTCACACCATCTGTCCAGACAGTTCTATCACTGACACCTCTCTTATaGTTGATATCTAAGGTTTAT +
Preference number: 4 (lower is better)
Translates to: SNMIENLGLTPSVQTVLSLTPLL*LISKVY
Trigger: ATAAACCTTAGATATCAAGCATAAGAGAGGTGTCAG...TGATAGAACTGTCTGGACAGATGGTGTGAGTCCCAGATTTTCTATCATGTTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR GCA 90 bp GCAAATGCAGTAAAGTCTCTTGGAACACAGAAAAACTTGCATTGTGAAGTAGAGTCTAACCTGAAAGAATaGTCGAGCTTCTTTATACCT +
Preference number: 4 (lower is better)
Translates to: ANAVKSLGTQKNLHCEVESNLKE*SSFFIP
Trigger: AGGTATAAAGAAGCTCGAGCATTCTTTCAGGTTAGA...CTCTACTTCACAATGCAAGTTTTTCTGTGTTCCAAGAGACTTTACTGCATTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675232.1
ENST00000676192.1
CDS-3UTR GCA 90 bp TTCACACTTCCCAAACACTGCTACTATAAAGAGCTGTTAAAGCAGAATGAAAGAAGTTCTTTTGAGGTTTaGAGGTTTCGGATCATGTCA +
Preference number: 4 (lower is better)
Translates to: FTLPKHCYYKELLKQNERSSFEV*RFRIMS
Trigger: TGACATGATCCGAAACCTGCAAACCTCAAAAGAACT...TCTTTCATTCTGCTTTAACAGCTCTTTATAGTAGCAGTGTTTGGGAAGTGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR GCA 90 bp TGTACTTTCTCTGACTGCTCTCTCTATTTACTAAAAGGTTTGGGAATGTTGTCAAAAGATCACCCCTGTTaGCTTTGGCTGTTAAAATAC +
Preference number: 4 (lower is better)
Translates to: CTFSDCSLYLLKGLGMLSKDHPC*LWLLKY
Trigger: GTATTTTAACAGCCAAAGGCAACAGGGGTGATCTTT...TGACAACATTCCCAAACCTTTTAGTAAATAGAGAGAGCAGTCAGAGAAAGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000674767.1
CDS-3UTR CCA 90 bp AAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATCAATTCGGCTTCCTTTaGATTTTGACAAACCAGCTC +
Preference number: 4 (lower is better)
Translates to: KHRTYTKGIAIELVCFTYQFGFL*ILTNQL
Trigger: GAGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTG...ATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000675695.1
CDS-3UTR CCA 90 bp AAAAGAAGTAGGTATTTGTCTCATTCATCTAGGCTTCTCCACTGTAACCTAGCATTCTACAAAGTGCATTaGATCCTTTGGAATGAGAAC +
Preference number: 4 (lower is better)
Translates to: KRSRYLSHSSRLLHCNLAFYKVH*ILWNEN
Trigger: GTTCTCATTCCAAAGGATCCAATGCACTTTGTAGAA...TGCTAGGTTACAGTGGAGAAGCCTAGATGAATGAGACAAATACCTACTTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp AATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTTCTACAAAGTGCATTaGATCCTTTGGAATGAGAAC +
Preference number: 4 (lower is better)
Translates to: NARASLYLHSINLECGTSFYKVH*ILWNEN
Trigger: GTTCTCATTCCAAAGGATCCAATGCACTTTGTAGAA...AGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CCA 90 bp AAGAATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTTCTACAAAGTGCATTaGATCCTTTGGAATGAGAAC +
Preference number: 4 (lower is better)
Translates to: KNARASLYLHSINLECGTFYKVH*ILWNEN
Trigger: GTTCTCATTCCAAAGGATCCAATGCACTTTGTAGAA...AGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CCA 90 bp CCTGAGGCTAAGAACTGTATACTTCATTTAATCCCCCTAAAAACCCTTAGAAGTTTCTACAAAGTGCATTaGATCCTTTGGAATGAGAAC +
Preference number: 4 (lower is better)
Translates to: PEAKNCILHLIPLKTLRSFYKVH*ILWNEN
Trigger: GTTCTCATTCCAAAGGATCCAATGCACTTTGTAGAA...ACTTCTAAGGGTTTTTAGGGGGATTAAATGAAGTATACAGTTCTTAGCCTCAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GCCTCCTTTAAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTAATAAACCTAGAGTGTaGTACTTCTTCTACAAAGTG +
Preference number: 4 (lower is better)
Translates to: ASFKHRTYTKGIAIELVCNKPRV*YFFYKV
Trigger: CACTTTGTAGAAGAAGTACCACACTCTAGGTTTATT...ACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTTAAAGGAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
ENST00000675695.1
CDS-3UTR CCA 90 bp AGTAACATGATAGAAAATCTGGGACTCACACCATCTGTCCAGACAGTTCTATCAAATAAACCTAGAGTGTaGTACTTCTTCTACAAAGTG +
Preference number: 4 (lower is better)
Translates to: SNMIENLGLTPSVQTVLSNKPRV*YFFYKV
Trigger: CACTTTGTAGAAGAAGTACCACACTCTAGGTTTATT...TGATAGAACTGTCTGGACAGATGGTGTGAGTCCCAGATTTTCTATCATGTTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR CCA 90 bp CTGCTGAAAGAATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGAATAAACCTAGAGTGTaGTACTTCTTCTACAAAGTG +
Preference number: 4 (lower is better)
Translates to: LLKECSSFFIPTLNKPRVNKPRV*YFFYKV
Trigger: CACTTTGTAGAAGAAGTACCACACTCTAGGTTTATT...CACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTCTTTCAGCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR CCA 90 bp AAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATACATCATCTTTTCCCTaGAAGGATAGTTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: KHRTYTKGIAIELVCFTYTSSFP*KDSSKL
Trigger: CAGCTTGGAACTATCCTTCCAGGGAAAAGATGATGT...ATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
ENST00000675695.1
CDS-3UTR CCA 90 bp CAATTCCAGTATCAAAGGATCAATAAGAAACACTGGTACATTTTGGTTGGATGTACATCATCTTTTCCCTaGAAGGATAGTTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: QFQYQRINKKHWYILVGCTSSFP*KDSSKL
Trigger: CAGCTTGGAACTATCCTTCCAGGGAAAAGATGATGT...ACATCCAACCAAAATGTACCAGTGTTTCTTATTGATCCTTTGATACTGGAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
CDS-3UTR CCA 90 bp CACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATGAAGTTTCACAGGGTACATaGACCTTCATGTCTACAAAC +
Preference number: 4 (lower is better)
Translates to: HRTYTKGIAIELVCFTYEVSQGT*TFMSTN
Trigger: GTTTGTAGACATGAAGGTCCATGTACCCTGTGAAAC...TTCATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
ENST00000644273.1
ENST00000675695.1
CDS-3UTR CCA 90 bp TTATCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTAGTTTCACAGGGTACATaGACCTTCATGTCTACAAAC +
Preference number: 4 (lower is better)
Translates to: LSKVFMLLYKSGMGGCKLVSQGT*TFMSTN
Trigger: GTTTGTAGACATGAAGGTCCATGTACCCTGTGAAAC...TAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000457847.1
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp CAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTAACAGACTGAAAAACTaGGGAGGGACACAAACTTTA +
Preference number: 4 (lower is better)
Translates to: QRFSCCFTNPEWVVVSYFNRLKN*GGTQTL
Trigger: TAAAGTTTGTGTCCCTCCCCAGTTTTTCAGTCTGTT...AAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp AGATGTCTTGGATTTCAGACACTCTTAAGACTTTGTACTTCAGGAAAGGATAAAGATATAAGAGAGAGATaGGGTAAACAGCATCCTAGC +
Preference number: 4 (lower is better)
Translates to: RCLGFQTLLRLCTSGKDKDIRER*GKQHPS
Trigger: GCTAGGATGCTGTTTACCCCATCTCTCTCTTATATC...TTTATCCTTTCCTGAAGTACAAAGTCTTAAGAGTGTCTGAAATCCAAGACATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GACTCCACAATCTTAAAAGTAGCACTAACATACCAGCTTAAATGCCCAGAAGAGAGGACAGAAGACTGTTaGTTATCATTTATCAAAGGT +
Preference number: 4 (lower is better)
Translates to: DSTILKVALTYQLKCPEERTEDC*LSFIKG
Trigger: ACCTTTGATAAATGATAACCAACAGTCTTCTGTCCT...CTCTTCTGGGCATTTAAGCTGGTATGTTAGTGCTACTTTTAAGATTGTGGAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp ATCTTAAAAGTAGCACTAACATACCAGCTTAAATGCCCAGAAGAGGAGTGGGTTAGGACAGAAGACTGTTaGTTATCATTTATCAAAGGT +
Preference number: 4 (lower is better)
Translates to: ILKVALTYQLKCPEEEWVRTEDC*LSFIKG
Trigger: ACCTTTGATAAATGATAACCAACAGTCTTCTGTCCT...AACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGTTAGTGCTACTTTTAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TTATATAGGAGCTTGTTAATGGGTCCCTACAAAATCTCTGTATTAGGTTGGGTTGATGATGTGCCATTTTaGGACAAGTTTGCTGACAAT +
Preference number: 4 (lower is better)
Translates to: LYRSLLMGPYKISVLGWVDDVPF*DKFADN
Trigger: ATTGTCAGCAAACTTGTCCCAAAATGGCACATCATC...AACCCAACCTAATACAGAGATTTTGTAGGGACCCATTAACAAGCTCCTATATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000675695.1
CDS-3UTR CCA 90 bp GCCTCCTTTAAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTCTAGCAAAGAGAAAATaGATTATGATGATGTGCCAT +
Preference number: 4 (lower is better)
Translates to: ASFKHRTYTKGIAIELVCLAKRK*IMMMCH
Trigger: ATGGCACATCATCATAATCCATTTTCTCTTTGCTAG...ACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTTAAAGGAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR CCA 90 bp AAAGTAGCACTAACATACCAGCTTAAATGCCCAGAAGAGGAGTGGGTTATTCTTCTAGCAAAGAGAAAATaGATTATGATGATGTGCCAT +
Preference number: 4 (lower is better)
Translates to: KVALTYQLKCPEEEWVILLAKRK*IMMMCH
Trigger: ATGGCACATCATCATAATCCATTTTCTCTTTGCTAG...AAGAATAACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGTTAGTGCTACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GACTCCACAATCTTAAAAGTAGCACTAACATACCAGCTTAAATGCCCAGAAGAGCTAGCAAAGAGAAAATaGATTATGATGATGTGCCAT +
Preference number: 4 (lower is better)
Translates to: DSTILKVALTYQLKCPEELAKRK*IMMMCH
Trigger: ATGGCACATCATCATAATCCATTTTCTCTTTGCTAG...CTCTTCTGGGCATTTAAGCTGGTATGTTAGTGCTACTTTTAAGATTGTGGAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TCCGGAATGGGTGGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTATGGGAATGCACTCTATaGGCTGATTTTCTAGCAAAG +
Preference number: 4 (lower is better)
Translates to: SGMGGCKLLSLICFRKSLWECTL*ADFLAK
Trigger: CTTTGCTAGAAAATCAGCCCATAGAGTGCATTCCCA...TAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACCACCCATTCCGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TCCTTTAAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCCCTCATCAAGTAGGGTaGATTTTGCCCAAAAATAGT +
Preference number: 4 (lower is better)
Translates to: SFKHRTYTKGIAIELVCFPHQVG*ILPKNS
Trigger: ACTATTTTTGGGCAAAATCCACCCTACTTGATGAGG...GAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTTAAAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR CCA 90 bp AAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTCTCCTCATCAAGTAGGGTaGATTTTGCCCAAAAATAGT +
Preference number: 4 (lower is better)
Translates to: KVFMLLYKSGMGGCKLLSPHQVG*ILPKNS
Trigger: ACTATTTTTGGGCAAAATCCACCCTACTTGATGAGG...AGAAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACAACTACCTGGTTGTCCTaGTTATCAATTAAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: VTFSNLFSKKSTSPFPQTTTWLS*LSIKRN
Trigger: ATTCCTCTTAATTGATAACCAGGACAACCAGGTAGT...TGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp AAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTCTAACTGTCTTATTGTCTaGAGAGAAGGCATTTTCCAG +
Preference number: 4 (lower is better)
Translates to: KVFMLLYKSGMGGCKLLSNCLIV*REGIFQ
Trigger: CTGGAAAATGCCTTCTCTCCAGACAATAAGACAGTT...AGAAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp CCAGAAACCACTCATGTTATTTATGAAAGACCCAATAATTCTGCATTGAGAATGCTTGTGGTCTTTTTATaGCAACACATTGCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: PETTHVIYERPNNSALRMLVVFL*QHIAFP
Trigger: AGGGAAGGCAATGTGTTGCCATAAAAAGACCACAAG...CATTCTCAATGCAGAATTATTGGGTCTTTCATAAATAACATGAGTGGTTTCTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp CATTTCAACCTACTATCTCAATATAACTGGATAACCTCATCCCACTCAGAAATACTTGTGGTCTTTTTATaGCAACACATTGCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: HFNLLSQYNWITSSHSEILVVFL*QHIAFP
Trigger: AGGGAAGGCAATGTGTTGCCATAAAAAGACCACAAG...TATTTCTGAGTGGGATGAGGTTATCCAGTTATATTGAGATAGTAGGTTGAAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp CTGAAAGAATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTTTTCTAAATCTACATaGTCCATCTTCTATAGTGGC +
Preference number: 4 (lower is better)
Translates to: LKECSSFFIPTLNKPRVWFSKST*SIFYSG
Trigger: GCCACTATAGAAGATGGACCATGTAGATTTAGAAAA...CCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTCTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CCA 90 bp TGTAACTTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGCAGATTTGTGGGTCTTaGGCACTTGACAGTTATATA +
Preference number: 4 (lower is better)
Translates to: CNFRKGTNFLSMCSLSLKQICGS*ALDSYI
Trigger: TATATAACTGTCAAGTGCCCAAGACCCACAAATCTG...CTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCCCTTCCGAAAGTTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CCA 90 bp TTCACACTTCCCAAACACTGCTACTATAAAGAGCTGTTAAAGCAGAATGAAAGAAAAATGGCATATGGCTaGGGGAATCTTCCAAAGAAA +
Preference number: 4 (lower is better)
Translates to: FTLPKHCYYKELLKQNERKMAYG*GNLPKK
Trigger: TTTCTTTGGAAGATTCCCCCAGCCATATGCCATTTT...TCTTTCATTCTGCTTTAACAGCTCTTTATAGTAGCAGTGTTTGGGAAGTGTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675668.1
3UTR CAA 72 bp ACTTTCTCTGACTGCTCTCTCTATTTACTAAAAGGTTaGGGAATGTTGTCAGAATGTTGTTGGTTAATACCG +
Preference number: 4 (lower is better)
Translates to: TFSDCSLYLLKG*GMLSECCWLIP
Trigger: CGGTATTAACCAACAACATTCTGACAACATTCCCAAACCTTTTAGTAAATAGAGAGAGCAGTCAGAGAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674767.1
3UTR CAA 72 bp GAAATATGTGAATGTGGTAAGCTGCTCTTCAACTTTTaGCTTGCGTACCGTGGAAGTAAAGACTTTGAAAAA +
Preference number: 4 (lower is better)
Translates to: EICECGKLLFNF*LAYRGSKDFEK
Trigger: TTTTTCAAAGTCTTTACTTCCACGGTACGCAAGCAAAAAGTTGAAGAGCAGCTTACCACATTCACATATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675232.1
CDS-3UTR TCA 90 bp TCCTTTAAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCCACTTGGTTGTCTTTTaGAAGTATCTCAGTCGTTTT +
Preference number: 4 (lower is better)
Translates to: SFKHRTYTKGIAIELVCFHLVVF*KYLSRF
Trigger: AAAACGACTGAGATACTTTCAAAAGACAACCAAGTG...GAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTTAAAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000675695.1
CDS-3UTR TCA 90 bp TTATCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTATCAATCTTTAGGCACTaGAATCCCATATTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LSKVFMLLYKSGMGGCKLSIFRH*NPIFSA
Trigger: AGCTGAGAATATGGGATTTCAGTGCCTAAAGATTGA...TAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATGAATCAATCTTTAGGCACTaGAATCCCATATTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: HRTYTKGIAIELVCFTYESIFRH*NPIFSA
Trigger: AGCTGAGAATATGGGATTTCAGTGCCTAAAGATTGA...TTCATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
ENST00000675695.1
CDS-3UTR TCA 90 bp AGCAAACTAGGTAGCATATGGGATAATATTAGGAGACAACTGCTTAACCAAGAAGAGAATTACATCAGATaGCTCTTTCTGTGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: SKLGSIWDNIRRQLLNQEENYIR*LFLCLQ
Trigger: TTGAAGACACAGAAAGAGTCATCTGATGTAATTCTC...TTCTTGGTTAAGCAGTTGTCTCCTAATATTATCCCATATGCTACCTAGTTTGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp AGAGGAAAATCTGCCAAGCTCCAGAAAGTAGTCCTAAATAGCATAGATAAGATAGAGAATTACATCAGATaGCTCTTTCTGTGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: RGKSAKLQKVVLNSIDKIENYIR*LFLCLQ
Trigger: TTGAAGACACAGAAAGAGTCATCTGATGTAATTCTC...TATCTTATCTATGCTATTTAGGACTACTTTCTGGAGCTTGGCAGATTTTCCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp AAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTCTGAGAATTACATCAGATaGCTCTTTCTGTGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: KVFMLLYKSGMGGCKLLSENYIR*LFLCLQ
Trigger: TTGAAGACACAGAAAGAGTCATCTGATGTAATTCTC...AGAAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTATTGTATGTGGCACATaGAAATTCCTCAGTACTAAG +
Preference number: 4 (lower is better)
Translates to: QRFSCCFTNPEWVVVSYFIVCGT*KFLSTK
Trigger: CTTAGTACTGAGGAATTTTCATGTGCCACATACAAT...AAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp TTAAATGCCCAGAAGAGGAGTGGGTTATTCTTTTCAACTAGTATATCCTTCCTTCAAAGTCTGATCACTTaGATATTAACTCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: LNAQKRSGLFFSTSISFLQSLIT*ILTQTP
Trigger: TGGAGTCTGAGTTAATATTCAAGTGATCAGACTTTG...AAGGAAGGATATACTAGTTGAAAAGAATAACCCACTCCTCTTCTGGGCATTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp ATGGGTGGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCTTCTTGACTAGGTTTTaGGGGAATATTTCTCCTAAG +
Preference number: 4 (lower is better)
Translates to: MGGCKLLSLICFRKSLPAFLTRF*GNISPK
Trigger: CTTAGGAGAAATATTCCCTCAAAACCTAGTCAAGAA...GGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACCACCCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp TCCGGAATGGGTGGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTAAATGTGGCACTTTCTTaGCTAGGTTTTGAGGGAATA +
Preference number: 4 (lower is better)
Translates to: SGMGGCKLLSLICFRKSLNVALS*LGFEGI
Trigger: TATTCCCTCAAAACCTAGTCAAGAAAGTGCCACATT...TAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACCACCCATTCCGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATGAAGATTTCAGTCTGATGTaGAGCAGCTTAAAATGGCAT +
Preference number: 4 (lower is better)
Translates to: HRTYTKGIAIELVCFTYEDFSLM*SSLKWH
Trigger: ATGCCATTTTAAGCTGCTTCACATCAGACTGAAATC...TTCATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
ENST00000644273.1
ENST00000675695.1
CDS-3UTR TCA 90 bp AAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATGATTTCAGTCTGATGTaGAGCAGCTTAAAATGGCAT +
Preference number: 4 (lower is better)
Translates to: KHRTYTKGIAIELVCFTYDFSLM*SSLKWH
Trigger: ATGCCATTTTAAGCTGCTTCACATCAGACTGAAATC...ATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
ENST00000644273.1
ENST00000675695.1
CDS-3UTR TCA 90 bp AAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATTCTACCCATACCAGTTaGTTCAAAATGGGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: KHRTYTKGIAIELVCFTYSTHTS*FKMGRK
Trigger: TTTCCTTCCCATTTTGAATCAACTGGTATGGGTAGA...ATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642952.1
ENST00000644273.1
ENST00000675695.1
CDS-3UTR GCA 90 bp TGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCACTTCTTCTACAAAGTaGATTGGATCCTTTGGAATG +
Preference number: 4 (lower is better)
Translates to: CKLLSLICFRKSLPAHSLTSSTK*IGSFGM
Trigger: CATTCCAAAGGATCCAATGCACTTTGTAGAAGAAGT...GAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp CAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTACTTCTTCTACAAAGTaGATTGGATCCTTTGGAATG +
Preference number: 4 (lower is better)
Translates to: QRFSCCFTNPEWVVVSYFTSSTK*IGSFGM
Trigger: CATTCCAAAGGATCCAATGCACTTTGTAGAAGAAGT...AAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCTACAAAGTGCACTTCTTCTACAAAGTaGATTGGATCCTTTGGAATG +
Preference number: 4 (lower is better)
Translates to: SLYLHSINLECGTSSTKCTSSTK*IGSFGM
Trigger: CATTCCAAAGGATCCAATGCACTTTGTAGAAGAAGT...GCACTTTGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR GCA 90 bp GTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTCTCTAACTTCTTCTACAAAGTaGATTGGATCCTTTGGAATG +
Preference number: 4 (lower is better)
Translates to: VFMLLYKSGMGGCKLLSLTSSTK*IGSFGM
Trigger: CATTCCAAAGGATCCAATGCACTTTGTAGAAGAAGT...TAGAGAAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TGTAACTTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGACTTCTTCTACAAAGTaGATTGGATCCTTTGGAATG +
Preference number: 4 (lower is better)
Translates to: CNFRKGTNFLSMCSLSLKTSSTK*IGSFGM
Trigger: CATTCCAAAGGATCCAATGCACTTTGTAGAAGAAGT...CTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCCCTTCCGAAAGTTACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR GCA 90 bp CACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATGAAGTACTGCTGAAAGAATaGTCGAGCTTCTTTATACCT +
Preference number: 4 (lower is better)
Translates to: HRTYTKGIAIELVCFTYEVLLKE*SSFFIP
Trigger: AGGTATAAAGAAGCTCGAGCATTCTTTCAGCAGTAC...TTCATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
CDS-3UTR GCA 90 bp TGGTTTTATGATAGAAGATACCTTTCAAACTTCTGGCTTCTACCCATACCAGTTCAAAGGTTTTCATGTTaGTTTACAAATCCGGAATGG +
Preference number: 4 (lower is better)
Translates to: WFYDRRYLSNFWLLPIPVQRFSC*FTNPEW
Trigger: CCATTCCGGATTTGTAAAGCAACATGAAAACCTTTG...AACTGGTATGGGTAGAAGCCAGAAGTTTGAAAGGTATCTTCTATCATAAAACCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
CDS-3UTR GCA 90 bp CAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTCAAAGGTTTTCATGTTaGTTTACAAATCCGGAATGG +
Preference number: 4 (lower is better)
Translates to: QRFSCCFTNPEWVVVSYFQRFSC*FTNPEW
Trigger: CCATTCCGGATTTGTAAAGCAACATGAAAACCTTTG...AAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000457847.1
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTGGATTATGATGATGTaGCATTTTGGGACAAGTTTG +
Preference number: 4 (lower is better)
Translates to: SKVFMLLYKSGMGGCKLLWIMMM*HFGTSL
Trigger: CAAACTTGTCCCAAAATGGCACATCATCATAATCCA...AAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp AATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTTTAGAATTTGGGAATaGACTCTATGGGCTGATTTT +
Preference number: 4 (lower is better)
Translates to: NARASLYLHSINLECGTSFRIWE*TLWADF
Trigger: AAAATCAGCCCATAGAGTGCATTCCCAAATTCTAAA...AGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR GCA 90 bp CACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATGAAAAAGTGGCAATGGGATaGATCTTGAGCTTAGAGAAT +
Preference number: 4 (lower is better)
Translates to: HRTYTKGIAIELVCFTYEKVAMG*ILSLEN
Trigger: ATTCTCTAAGCTCAAGATGCATCCCATTGCCACTTT...TTCATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR GCA 90 bp CACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATGAATCCTGCCTATCTATGTaGCATTTGAAGTACTGTAGT +
Preference number: 4 (lower is better)
Translates to: HRTYTKGIAIELVCFTYESCLSM*HLKYCS
Trigger: ACTACAGTACTTCAAATGGCACATAGATAGGCAGGA...TTCATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR GCA 90 bp CAATTCCAGTATCAAAGGATCAATAAGAAACACTGGTACATTTTGGTTGGATGTAAATATGCCACTGTGTaGTATCAAATCCAATTCGGC +
Preference number: 4 (lower is better)
Translates to: QFQYQRINKKHWYILVGCKYATV*YQIQFG
Trigger: GCCGAATTGGATTTGATAGCACACAGTGGCATATTT...ACATCCAACCAAAATGTACCAGTGTTTCTTATTGATCCTTTGATACTGGAATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000676192.1
CDS-3UTR GCA 90 bp TTCACACTTCCCAAACACTGCTACTATAAAGAGCTGTTAAAGCAGAATGAAAGAACACTTCCCAAACACTaGTACTATAAAGAGCTGTTA +
Preference number: 4 (lower is better)
Translates to: FTLPKHCYYKELLKQNERTLPKH*YYKELL
Trigger: TAACAGCTCTTTATAGTAGCAGTGTTTGGGAAGTGT...TCTTTCATTCTGCTTTAACAGCTCTTTATAGTAGCAGTGTTTGGGAAGTGTGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR CCA 90 bp ATCAAGGTACTGCTGAAAGAATGCTCGAGCTTCTTTATACCTACACTCAATAAATTCTACAAAGTGCATTaGATCCTTTGGAATGAGAAC +
Preference number: 4 (lower is better)
Translates to: IKVLLKECSSFFIPTLNKFYKVH*ILWNEN
Trigger: GTTCTCATTCCAAAGGATCCAATGCACTTTGTAGAA...TTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTCTTTCAGCAGTACCTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR CCA 90 bp TCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCTACAAAGTGCTTCTACAAAGTGCATTaGATCCTTTGGAATGAGAAC +
Preference number: 4 (lower is better)
Translates to: SLYLHSINLECGTSSTKCFYKVH*ILWNEN
Trigger: GTTCTCATTCCAAAGGATCCAATGCACTTTGTAGAA...GCACTTTGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CCA 90 bp TCACTGTATCTCTGTGTTTCATGTCATCTCTTAGAGCTGAACTTTCATGCCTTTAATAAACCTAGAGTGTaGTACTTCTTCTACAAAGTG +
Preference number: 4 (lower is better)
Translates to: SLYLCVSCHLLELNFHAFNKPRV*YFFYKV
Trigger: CACTTTGTAGAAGAAGTACCACACTCTAGGTTTATT...AAAGGCATGAAAGTTCAGCTCTAAGAGATGACATGAAACACAGAGATACAGTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CCA 90 bp ATGGGTGGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCTATCTCAATATAACTaGATAACCTCATCCCACTCA +
Preference number: 4 (lower is better)
Translates to: MGGCKLLSLICFRKSLPALSQYN*ITSSHS
Trigger: TGAGTGGGATGAGGTTATCCAGTTATATTGAGATAG...GGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACCACCCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp AATGCAGTAAAGTCTCTTGGAACACAGAAAAACTTGCATTGTGAAGTAGAGCCATCATGTCTAGTAACATaGTCTCACTTGAATGATTTG +
Preference number: 4 (lower is better)
Translates to: NAVKSLGTQKNLHCEVEPSCLVT*SHLNDL
Trigger: CAAATCATTCAAGTGAGACCATGTTACTAGACATGA...TGGCTCTACTTCACAATGCAAGTTTTTCTGTGTTCCAAGAGACTTTACTGCATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602526.1
CDS-3UTR CCA 90 bp CATTTCAACCTACTATCTCAATATAACTGGATAACCTCATCCCACTCAGAAATAAACAGACTGAAAAACTaGGGAGGGACACAAACTTTA +
Preference number: 4 (lower is better)
Translates to: HFNLLSQYNWITSSHSEINRLKN*GGTQTL
Trigger: TAAAGTTTGTGTCCCTCCCCAGTTTTTCAGTCTGTT...TATTTCTGAGTGGGATGAGGTTATCCAGTTATATTGAGATAGTAGGTTGAAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp ACTCCCAATTTGTTTAATGTTTTCGCTGCTAGTTGCAGTAATTCCTTTGCACTCTTTACAAATCCGGAATaGGTGGTTGTAAGTTACTTT +
Preference number: 4 (lower is better)
Translates to: TPNLFNVFAASCSNSFALFTNPE*VVVSYF
Trigger: AAAGTAACTTACAACCACCCATTCCGGATTTGTAAA...GAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAACATTAAACAAATTGGGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000642537.1
ENST00000645933.1
ENST00000675736.1
CDS-3UTR CCA 90 bp ATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCTACAAAGTGCATTGGCTAGCAAAGAGAAAATaGATTATGATGATGTGCCAT +
Preference number: 4 (lower is better)
Translates to: IPTLNKPRVWYFFYKVHWLAKRK*IMMMCH
Trigger: ATGGCACATCATCATAATCCATTTTCTCTTTGCTAG...CCAATGCACTTTGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TCTTTTCTAAATCTACATGGTCCATCTTCTATAGTGGCTTTATCCTACTTGGACACTGCACAAAACATCTaGCTTGTAATCTTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: SFLNLHGPSSIVALSYLDTAQNI*LVIFQS
Trigger: ACTTTGGAAGATTACAAGCCAGATGTTTTGTGCAGT...GTCCAAGTAGGATAAAGCCACTATAGAAGATGGACCATGTAGATTTAGAAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675232.1
ENST00000676192.1
CDS-3UTR TCA 90 bp TTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCTACAAAGTGCACTTGGTTGTCTTTTaGAAGTATCTCAGTCGTTTT +
Preference number: 4 (lower is better)
Translates to: FFIPTLNKPRVWYFFYKVHLVVF*KYLSRF
Trigger: AAAACGACTGAGATACTTTCAAAAGACAACCAAGTG...CACTTTGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000602661.6
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
CDS-3UTR TCA 90 bp TTATCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTAATTGTATGTGGCACATaGAAATTCCTCAGTACTAAG +
Preference number: 4 (lower is better)
Translates to: LSKVFMLLYKSGMGGCKLIVCGT*KFLSTK
Trigger: CTTAGTACTGAGGAATTTTCATGTGCCACATACAAT...TAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR TCA 90 bp CACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATGAATTCTTGACTAGGTTTTaGGGGAATATTTCTCCTAAG +
Preference number: 4 (lower is better)
Translates to: HRTYTKGIAIELVCFTYEFLTRF*GNISPK
Trigger: CTTAGGAGAAATATTCCCTCAAAACCTAGTCAAGAA...TTCATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR TCA 90 bp AAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATCTTTCAACCCTACTGTaGGAGCTGCTTATAATTATA +
Preference number: 4 (lower is better)
Translates to: KHRTYTKGIAIELVCFTYLSTLL*ELLIII
Trigger: TATAATTATAAGCAGCTCTCACAGTAGGGTTGAAAG...ATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000642952.1
ENST00000644273.1
ENST00000675695.1
CDS-3UTR TCA 90 bp TTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCTACAAAGTGTCAGCTTTTTATTCATaGGGCTGGCTGCATAAATTT +
Preference number: 4 (lower is better)
Translates to: FFIPTLNKPRVWYFFYKVSAFYS*GWLHKF
Trigger: AAATTTATGCAGCCAGCCTCATGAATAAAAAGCTGA...CACTTTGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR TCA 90 bp GTATATCATGCTTACCTTTATCCTCAGAATACCCTAAATTCACAGAGCAAAACACACTGCTTGGTGATCTaGAAATCCACTTCTAATTTA +
Preference number: 4 (lower is better)
Translates to: VYHAYLYPQNTLNSQSKTHCLVI*KSTSNL
Trigger: TAAATTAGAAGTGGATTTTCAGATCACCAAGCAGTG...TGTTTTGCTCTGTGAATTTAGGGTATTCTGAGGATAAAGGTAAGCATGATATAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674767.1
CDS-3UTR TCA 90 bp ACCAGGGCTCAATATCACACTATTGATGAGATTTCACCTTTTATTCCTTCTAAATACTTTAATGTTTGTTaGATGGATCTCAGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: TRAQYHTIDEISPFIPSKYFNVC*MDLRLV
Trigger: CACCAACCTGAGATCCATTCAACAAACATTAAAGTA...TTTAGAAGGAATAAAAGGTGAAATCTCATCAATAGTGTGATATTGAGCCCTGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674767.1
CDS-3UTR GCA 90 bp TTATCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTAACTTCTTCTACAAAGTaGATTGGATCCTTTGGAATG +
Preference number: 4 (lower is better)
Translates to: LSKVFMLLYKSGMGGCKLTSSTK*IGSFGM
Trigger: CATTCCAAAGGATCCAATGCACTTTGTAGAAGAAGT...TAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp AAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATACTTCTTCTACAAAGTaGATTGGATCCTTTGGAATG +
Preference number: 4 (lower is better)
Translates to: KHRTYTKGIAIELVCFTYTSSTK*IGSFGM
Trigger: CATTCCAAAGGATCCAATGCACTTTGTAGAAGAAGT...ATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
ENST00000675695.1
CDS-3UTR GCA 90 bp CCAGAAACCACTCATGTTATTTATGAAAGACCCAATAATTCTGCATTGAGAATGCAAAGGTTTTCATGTTaGTTTACAAATCCGGAATGG +
Preference number: 4 (lower is better)
Translates to: PETTHVIYERPNNSALRMQRFSC*FTNPEW
Trigger: CCATTCCGGATTTGTAAAGCAACATGAAAACCTTTG...CATTCTCAATGCAGAATTATTGGGTCTTTCATAAATAACATGAGTGGTTTCTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TCCGGAATGGGTGGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACAAAGGTTTTCATGTTaGTTTACAAATCCGGAATGG +
Preference number: 4 (lower is better)
Translates to: SGMGGCKLLSLICFRKSLQRFSC*FTNPEW
Trigger: CCATTCCGGATTTGTAAAGCAACATGAAAACCTTTG...TAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACCACCCATTCCGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000457847.1
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCTACAAAGTGCAAAGGTTTTCATGTTaGTTTACAAATCCGGAATGG +
Preference number: 4 (lower is better)
Translates to: FFIPTLNKPRVWYFFYKVQRFSC*FTNPEW
Trigger: CCATTCCGGATTTGTAAAGCAACATGAAAACCTTTG...CACTTTGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000642537.1
ENST00000645933.1
ENST00000675736.1
CDS-3UTR GCA 90 bp TTAAATGCCCAGAAGAGGAGTGGGTTATTCTTTTCAACTAGTATATCCTTCCTTTTTAGAATTTGGGAATaGACTCTATGGGCTGATTTT +
Preference number: 4 (lower is better)
Translates to: LNAQKRSGLFFSTSISFLFRIWE*TLWADF
Trigger: AAAATCAGCCCATAGAGTGCATTCCCAAATTCTAAA...AAGGAAGGATATACTAGTTGAAAAGAATAACCCACTCCTCTTCTGGGCATTTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp AGCAAACTAGGTAGCATATGGGATAATATTAGGAGACAACTGCTTAACCAAGAATTTAGAATTTGGGAATaGACTCTATGGGCTGATTTT +
Preference number: 4 (lower is better)
Translates to: SKLGSIWDNIRRQLLNQEFRIWE*TLWADF
Trigger: AAAATCAGCCCATAGAGTGCATTCCCAAATTCTAAA...TTCTTGGTTAAGCAGTTGTCTCCTAATATTATCCCATATGCTACCTAGTTTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR GCA 90 bp CATGAAGTCTTTTCTAAATCTACATGGTCCATCTTCTATAGTGGCTTTATCCTATCTAACCTGAAAGAATaGTCGAGCTTCTTTATACCT +
Preference number: 4 (lower is better)
Translates to: HEVFSKSTWSIFYSGFILSNLKE*SSFFIP
Trigger: AGGTATAAAGAAGCTCGAGCATTCTTTCAGGTTAGA...TAGGATAAAGCCACTATAGAAGATGGACCATGTAGATTTAGAAAAGACTTCATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CCA 90 bp AGATGTCTTGGATTTCAGACACTCTTAAGACTTTGTACTTCAGGAAAGGATAAATTCTACAAAGTGCATTaGATCCTTTGGAATGAGAAC +
Preference number: 4 (lower is better)
Translates to: RCLGFQTLLRLCTSGKDKFYKVH*ILWNEN
Trigger: GTTCTCATTCCAAAGGATCCAATGCACTTTGTAGAA...TTTATCCTTTCCTGAAGTACAAAGTCTTAAGAGTGTCTGAAATCCAAGACATCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTAATAAACCTAGAGTGTaGTACTTCTTCTACAAAGTG +
Preference number: 4 (lower is better)
Translates to: SKVFMLLYKSGMGGCKLLNKPRV*YFFYKV
Trigger: CACTTTGTAGAAGAAGTACCACACTCTAGGTTTATT...AAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TGTAACTTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGAATAAACCTAGAGTGTaGTACTTCTTCTACAAAGTG +
Preference number: 4 (lower is better)
Translates to: CNFRKGTNFLSMCSLSLKNKPRV*YFFYKV
Trigger: CACTTTGTAGAAGAAGTACCACACTCTAGGTTTATT...CTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCCCTTCCGAAAGTTACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CCA 90 bp AGAGGAAAATCTGCCAAGCTCCAGAAAGTAGTCCTAAATAGCATAGATAAGATAAATAAACCTAGAGTGTaGTACTTCTTCTACAAAGTG +
Preference number: 4 (lower is better)
Translates to: RGKSAKLQKVVLNSIDKINKPRV*YFFYKV
Trigger: CACTTTGTAGAAGAAGTACCACACTCTAGGTTTATT...TATCTTATCTATGCTATTTAGGACTACTTTCTGGAGCTTGGCAGATTTTCCTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TTATATAGGAGCTTGTTAATGGGTCCCTACAAAATCTCTGTATTAGGTTGGGTTAATAAACCTAGAGTGTaGTACTTCTTCTACAAAGTG +
Preference number: 4 (lower is better)
Translates to: LYRSLLMGPYKISVLGWVNKPRV*YFFYKV
Trigger: CACTTTGTAGAAGAAGTACCACACTCTAGGTTTATT...AACCCAACCTAATACAGAGATTTTGTAGGGACCCATTAACAAGCTCCTATATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000642952.1
ENST00000675695.1
CDS-3UTR CCA 90 bp CCAGAAACCACTCATGTTATTTATGAAAGACCCAATAATTCTGCATTGAGAATGCTATCTCAATATAACTaGATAACCTCATCCCACTCA +
Preference number: 4 (lower is better)
Translates to: PETTHVIYERPNNSALRMLSQYN*ITSSHS
Trigger: TGAGTGGGATGAGGTTATCCAGTTATATTGAGATAG...CATTCTCAATGCAGAATTATTGGGTCTTTCATAAATAACATGAGTGGTTTCTGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp GGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCTCATGTCTAGTAACATaGTCTCACTTGAATGATTTG +
Preference number: 4 (lower is better)
Translates to: GCKLLSLICFRKSLPAHSSCLVT*SHLNDL
Trigger: CAAATCATTCAAGTGAGACCATGTTACTAGACATGA...GGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp AGAATGGTACTCCCAATTTGTTTAATGTTTTCGCTGCTAGTTGCAGTAATTCCTTCATGTCTAGTAACATaGTCTCACTTGAATGATTTG +
Preference number: 4 (lower is better)
Translates to: RMVLPICLMFSLLVAVIPSCLVT*SHLNDL
Trigger: CAAATCATTCAAGTGAGACCATGTTACTAGACATGA...AGGAATTACTGCAACTAGCAGCGAAAACATTAAACAAATTGGGAGTACCATTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
CDS-3UTR CCA 90 bp TCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTTTACAAATCCGGAATaGGTGGTTGTAAGTTACTTT +
Preference number: 4 (lower is better)
Translates to: SKVFMLLYKSGMGGCKLLFTNPE*VVVSYF
Trigger: AAAGTAACTTACAACCACCCATTCCGGATTTGTAAA...AAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000457847.1
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp CCAGAAACCACTCATGTTATTTATGAAAGACCCAATAATTCTGCATTGAGAATGTATCTTTCAAACTTCTaGCTTCTACCCATACCAGTT +
Preference number: 4 (lower is better)
Translates to: PETTHVIYERPNNSALRMYLSNF*LLPIPV
Trigger: AACTGGTATGGGTAGAAGCCAGAAGTTTGAAAGATA...CATTCTCAATGCAGAATTATTGGGTCTTTCATAAATAACATGAGTGGTTTCTGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp AAGATACGAAGTTTCAGACAGCACTTTAATCAGGTGAACAATGTGAATATCAACACTGCACAAAACATCTaGCTTGTAATCTTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: KIRSFRQHFNQVNNVNINTAQNI*LVIFQS
Trigger: ACTTTGGAAGATTACAAGCCAGATGTTTTGTGCAGT...GTTGATATTCACATTGTTCACCTGATTAAAGTGCTGTCTGAAACTTCGTATCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675232.1
ENST00000676192.1
3UTR CAA 72 bp GATTCTATAACTCACCTTCTAAACACATCCTCCAAGTaGTTATCAATACAATCATTAACGCTCCTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: DSITHLLNTSSK*LSIQSLTLLGN
Trigger: GTTTCCAAGGAGCGTTAATGATTGTATTGATAACAACTTGGAGGATGTGTTTAGAAGGTGAGTTATAGAATC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674767.1
CDS-3UTR CCA 90 bp TCCGGAATGGGTGGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTAAATAAACCTAGAGTGTaGTACTTCTTCTACAAAGTG +
Preference number: 4 (lower is better)
Translates to: SGMGGCKLLSLICFRKSLNKPRV*YFFYKV
Trigger: CACTTTGTAGAAGAAGTACCACACTCTAGGTTTATT...TAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACCACCCATTCCGGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp CACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATGAAAGTTTTGTGAAATCATaGCCTCTTTCAAGATCATGT +
Preference number: 4 (lower is better)
Translates to: HRTYTKGIAIELVCFTYESFVKS*PLSRSC
Trigger: ACATGATCTTGAAAGAGGCCATGATTTCACAAAACT...TTCATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR CCA 90 bp TCCGGAATGGGTGGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTAAGTTTTGTGAAATCATaGCCTCTTTCAAGATCATGT +
Preference number: 4 (lower is better)
Translates to: SGMGGCKLLSLICFRKSLSFVKS*PLSRSC
Trigger: ACATGATCTTGAAAGAGGCCATGATTTCACAAAACT...TAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACCACCCATTCCGGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TTATCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTATTTACAAATCCGGAATaGGTGGTTGTAAGTTACTTT +
Preference number: 4 (lower is better)
Translates to: LSKVFMLLYKSGMGGCKLFTNPE*VVVSYF
Trigger: AAAGTAACTTACAACCACCCATTCCGGATTTGTAAA...TAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGATAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000457847.1
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp ATTTATCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTAGGACAGAAGACTGTTaGTTATCATTTATCAAAGGT +
Preference number: 4 (lower is better)
Translates to: IYQRFSCCFTNPEWVVVSRTEDC*LSFIKG
Trigger: ACCTTTGATAAATGATAACCAACAGTCTTCTGTCCT...ACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGATAAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000457847.1
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TCCGGAATGGGTGGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACTAGCAAAGAGAAAATaGATTATGATGATGTGCCAT +
Preference number: 4 (lower is better)
Translates to: SGMGGCKLLSLICFRKSLLAKRK*IMMMCH
Trigger: ATGGCACATCATCATAATCCATTTTCTCTTTGCTAG...TAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACCACCCATTCCGGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CCA 90 bp TTCATGAAGTCTTTTCTAAATCTACATGGTCCATCTTCTATAGTGGCTTTATCCTTTTCTAAATCTACATaGTCCATCTTCTATAGTGGC +
Preference number: 4 (lower is better)
Translates to: FMKSFLNLHGPSSIVALSFSKST*SIFYSG
Trigger: GCCACTATAGAAGATGGACCATGTAGATTTAGAAAA...GGATAAAGCCACTATAGAAGATGGACCATGTAGATTTAGAAAAGACTTCATGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS GCA 90 bp GCGCGCTCAGCCTGTGGCCGGCCTCCTCACCAAGGGGTAGGCAGGTaGCCAGAATGCTGGAGGATGCCCGGTAAGGGCACCCGAGTCGCC +
Preference number: 5 (lower is better)
Translates to: ARSACGRPPHQGVGR*PECWRMPGKGTRVA
Trigger: GGCGACTCGGGTGCCCTTACCGGGCATCCTCCAGCATTCTGGGCACCTGCCTACCCCTTGGTGAGGAGGCCGGCCACAGGCTGAGCGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS TCA 90 bp GGAGGATGCCCGGTAAGGGCACCCGAGTCGCCAGCGGTACCTGTCTaGAGGCGCCCACCCATCCCCGGGTACCGACCTGAGCCTCCCGTA +
Preference number: 5 (lower is better)
Translates to: GGCPVRAPESPAVPV*RRPPIPGYRPEPPV
Trigger: TACGGGAGGCTCAGGTCGGTACCCGGGGATGGGTGGGCGCCTTCAGACAGGTACCGCTGGCGACTCGGGTGCCCTTACCGGGCATCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS GCA 90 bp GCCTGTGGCCGGCCTCCTCACCAAGGGGTAGGCAGGTGCCCAGAATaGTGGAGGATGCCCGGTAAGGGCACCCGAGTCGCCAGCGGTACC +
Preference number: 5 (lower is better)
Translates to: ACGRPPHQGVGRCPE*WRMPGKGTRVASGT
Trigger: GGTACCGCTGGCGACTCGGGTGCCCTTACCGGGCATCCTCCAGCATTCTGGGCACCTGCCTACCCCTTGGTGAGGAGGCCGGCCACAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS TCA 90 bp GGACTGGCCAAGTGGAAGTCTACCACGCGATGCTCGTGGACTGACTaGGGAGTACCCAGCCCGGAGCGCGCTCAGCCTGTGGCCGGCCTC +
Preference number: 5 (lower is better)
Translates to: GLAKWKSTTRCSWTD*GVPSPERAQPVAGL
Trigger: GAGGCCGGCCACAGGCTGAGCGCGCTCCGGGCTGGGTACTCCTCAGTCAGTCCACGAGCATCGCGTGGTAGACTTCCACTTGGCCAGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS TCA 90 bp AGCGGTACCTGTCTGAAGGCGCCCACCCATCCCCGGGTACCGACCTaGGCCTCCCGTACCTTACCTCACTCAACAGCAGGCTGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: SGTCLKAPTHPRVPT*ASRTLPHSTAGCSR
Trigger: GCGGCTGCAGCCTGCTGTTGAGTGAGGTAAGGTACGGGAGGCTCAGGTCGGTACCCGGGGATGGGTGGGCGCCTTCAGACAGGTACCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS TCA 90 bp GGAAGGACTGGCCAAGTGGAAGTCTACCACGCGATGCTCGTGGACTaGCTGAGGAGTACCCAGCCCGGAGCGCGCTCAGCCTGTGGCCGG +
Preference number: 5 (lower is better)
Translates to: GRTGQVEVYHAMLVD*LRSTQPGARSACGR
Trigger: CCGGCCACAGGCTGAGCGCGCTCCGGGCTGGGTACTCCTCAGTCAGTCCACGAGCATCGCGTGGTAGACTTCCACTTGGCCAGTCCTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS-3UTR CAA 90 bp AGGATCTGTGTGCGAGTGGACAAGGACTCAGAGAAAGGACAAGGGCTACAGAGACCTGAGGTCAGGGGCTaGAGACCAACCTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: RICVRVDKDSEKGQGLQRPEVRG*RPTWPT
Trigger: TGTTGGCCAGGTTGGTCTCAAGCCCCTGACCTCAGG...TCTCTGTAGCCCTTGTCCTTTCTCTGAGTCCTTGTCCACTCGCACACAGATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR CAA 90 bp TACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTCGCTACGAAGGCCCACTaGGGCTGTCAGGCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: YQVDRMSGQFADIVQGDFATKAH*GCQASA
Trigger: AGCTGAGGCCTGACAGCCCAAGTGGGCCTTCGTAGC...GAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CAA 90 bp CAAGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGCCAGATTCCATTGGGTaGCACATTGGGAGGAGAGCG +
Preference number: 5 (lower is better)
Translates to: QVAVPEVVATPLMKDYQVPDSIG*HIGRRA
Trigger: CGCTCTCCTCCCAATGTGCAACCCAATGGAATCTGG...CACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCCACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
CDS-3UTR CAA 90 bp AGAGGAGAGAAGGACAAGTGCTCCCTGCTTAGAGAGGACTGGGTGACTACCTGGCAGGCATTTAGCAGGTaGGTGCTGATGGTTCCCTTG +
Preference number: 5 (lower is better)
Translates to: RGEKDKCSLLREDWVTTWQAFSR*VLMVPL
Trigger: CAAGGGAACCATCAGCACCAACCTGCTAAATGCCTG...CCAGGTAGTCACCCAGTCCTCTCTAAGCAGGGAGCACTTGTCCTTCTCTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GTTCCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTGCTACGAAGGCCCACTaGGGCTGTCAGGCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: VPESESIPSSRGSLLSIFATKAH*GCQASA
Trigger: AGCTGAGGCCTGACAGCCCAAGTGGGCCTTCGTAGC...AAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CAA 90 bp GTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATCGCATGTGTAATCTCAGCACTTaGAGAGGCCAACGCGGGCGG +
Preference number: 5 (lower is better)
Translates to: VPEVVATPLMKDYQVDRMCNLST*RGQRGR
Trigger: CCGCCCGCGTTGGCCTCTCAAAGTGCTGAGATTACA...CATGCGATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS-3UTR CAA 90 bp TACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTCCCATTGGGTTGCACATaGGGAGGAGAGCGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: YQVDRMSGQFADIVQGDFPLGCT*GGERFQ
Trigger: CTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATGG...GAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
CDS-3UTR CAA 90 bp ACCGAACTAGGCTGTGGAGGGCTCTGGATTCCAGTCGACAAATCCAAAACCCTTGGCTGGATTAGACGGTaGCCCAGTTTGGGCTCCAAA +
Preference number: 5 (lower is better)
Translates to: TELGCGGLWIPVDKSKTLGWIRR*PSLGSK
Trigger: TTTGGAGCCCAAACTGGGCAACCGTCTAATCCAGCC...AAGGGTTTTGGATTTGTCGACTGGAATCCAGAGCCCTCCACAGCCTAGTTCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR CAA 90 bp GGTAAAGGGCCTGTCCCTTACCTGCCACTACCAACCGGCCACCCACCACACAAGTCACCCCTGTTGCCTTaGGCTGTTAAAATACTGAAT +
Preference number: 5 (lower is better)
Translates to: GKGPVPYLPLPTGHPPHKSPLLP*AVKILN
Trigger: ATTCAGTATTTTAACAGCCAAAGGCAACAGGGGTGA...CTTGTGTGGTGGGTGGCCGGTTGGTAGTGGCAGGTAAGGGACAGGCCCTTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674767.1
CDS-3UTR CAA 90 bp GCAGGGGGATTTCAGTTCCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTGCAGAAATGCAGAACTaGTCAGCGTTAAAAGGGCCA +
Preference number: 5 (lower is better)
Translates to: AGGFQFQRVSLSRLAGDLAEMQN*SALKGP
Trigger: TGGCCCTTTTAACGCTGACAAGTTCTGCATTTCTGC...AAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAACTGAAATCCCCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CAA 90 bp GGCCCACTTGGGCTGTCAGGCCTCAGCTTTAGGTGCCAGTACACTGTATTAGAGGCAGAAATGCAGAACTaGTCAGCGTTAAAAGGGCCA +
Preference number: 5 (lower is better)
Translates to: GPLGLSGLSFRCQYTVLEAEMQN*SALKGP
Trigger: TGGCCCTTTTAACGCTGACAAGTTCTGCATTTCTGC...CTCTAATACAGTGTACTGGCACCTAAAGCTGAGGCCTGACAGCCCAAGTGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CAA 90 bp TTTAAGTCTCAAGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACCCAGATTCCATTGGGTaGCACATTGGGAGGAGAGCG +
Preference number: 5 (lower is better)
Translates to: FKSQVAVPEVVATPLMKDPDSIG*HIGRRA
Trigger: CGCTCTCCTCCCAATGTGCAACCCAATGGAATCTGG...GTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCCACTTGAGACTTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
CDS-3UTR CAA 90 bp AGAGGAGAGAAGGACAAGTGCTCCCTGCTTAGAGAGGACTGGGTGACTACCTGGTATCCTTCCTTAGCTTaGCCTGGTGAGCTCATCTTC +
Preference number: 5 (lower is better)
Translates to: RGEKDKCSLLREDWVTTWYPSLA*PGELIF
Trigger: GAAGATGAGCTCACCAGGCAAAGCTAAGGAAGGATA...CCAGGTAGTCACCCAGTCCTCTCTAAGCAGGGAGCACTTGTCCTTCTCTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp CTGTCAAATAGGATCTGTGTGCGAGTGGACAAGGACTCAGAGAAAGGACAAGGGACTGAGACTTTGGGGTaGTTTGTCACACCGCCACCC +
Preference number: 5 (lower is better)
Translates to: LSNRICVRVDKDSEKGQGTETLG*FVTPPP
Trigger: GGGTGGCGGTGTGACAAACAACCCCAAAGTCTCAGT...CCCTTGTCCTTTCTCTGAGTCCTTGTCCACTCGCACACAGATCCTATTTGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR CAA 90 bp CAAGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGTTCCCAAATTTGTGTTaGAGCGGAAGTCCTGCATCC +
Preference number: 5 (lower is better)
Translates to: QVAVPEVVATPLMKDYQVFPNLC*SGSPAS
Trigger: GGATGCAGGACTTCCGCTCAAACACAAATTTGGGAA...CACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCCACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR CAA 90 bp GTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACCCATTGGGTTGCACATaGGGAGGAGAGCGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: VGFNVFEGFTGYMDLHVYPLGCT*GGERFQ
Trigger: CTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATGG...GTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp CTAAGCGGCAGAAACACCCTGAGACTTAGCCTCAATGAAGCACTGGATGCCTTCATAGGCCAGATTCCATaGGGTTGCACATTGGGAGGA +
Preference number: 5 (lower is better)
Translates to: LSGRNTLRLSLNEALDAFIGQIP*GCTLGG
Trigger: TCCTCCCAATGTGCAACCCAATGGAATCTGGCCTAT...GAAGGCATCCAGTGCTTCATTGAGGCTAAGTCTCAGGGTGTTTCTGCCGCTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp AGAGGAGAGAAGGACAAGTGCTCCCTGCTTAGAGAGGACTGGGTGACTACCTGGCTAACTACCAACAAGTaGTCAACTTCCCCAGGTAAG +
Preference number: 5 (lower is better)
Translates to: RGEKDKCSLLREDWVTTWLTTNK*STSPGK
Trigger: CTTACCTGGGGAAGTTGACAACTTGTTGGTAGTTAG...CCAGGTAGTCACCCAGTCCTCTCTAAGCAGGGAGCACTTGTCCTTCTCTCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GCTCTGACATTTGTGGGGGCCATGATAAGGGTACAAATGGAGACTCCATCCCCGCAGGGGAAACAATCTTaGGCGCATCATTTCACTAGC +
Preference number: 5 (lower is better)
Translates to: ALTFVGAMIRVQMETPSPQGKQS*AHHFTS
Trigger: GCTAGTGAAATGATGCGCCAAAGATTGTTTCCCCTG...CGGGGATGGAGTCTCCATTTGTACCCTTATCATGGCCCCCACAAATGTCAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR CAA 90 bp GCTACGAAGGCCCACTTGGGCTGTCAGGCCTCAGCTTTAGGTGCCAGTACACTGAACCCCACTGTAAATTaGCCTGTTTTCACTGTATCT +
Preference number: 5 (lower is better)
Translates to: ATKAHLGCQASALGASTLNPTVN*PVFTVS
Trigger: AGATACAGTGAAAACAGGCAAATTTACAGTGGGGTT...CAGTGTACTGGCACCTAAAGCTGAGGCCTGACAGCCCAAGTGGGCCTTCGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CAA 90 bp GGTAAAGGGCCTGTCCCTTACCTGCCACTACCAACCGGCCACCCACCACACAAGGTTGTCAGAATGTTGTaGGTTAATACCGATAAAGGA +
Preference number: 5 (lower is better)
Translates to: GKGPVPYLPLPTGHPPHKVVRML*VNTDKG
Trigger: TCCTTTATCGGTATTAACCAACAACATTCTGACAAC...CTTGTGTGGTGGGTGGCCGGTTGGTAGTGGCAGGTAAGGGACAGGCCCTTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674767.1
CDS-3UTR CAA 90 bp GGTAAAGGGCCTGTCCCTTACCTGCCACTACCAACCGGCCACCCACCACACAAGCTCAAGGATCATTTCTaGAATGAAAAGGATAGAGTC +
Preference number: 5 (lower is better)
Translates to: GKGPVPYLPLPTGHPPHKLKDHF*NEKDRV
Trigger: GACTCTATCCTTTTCATTCAAGAAATGATCCTTGAG...CTTGTGTGGTGGGTGGCCGGTTGGTAGTGGCAGGTAAGGGACAGGCCCTTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674767.1
CDS-3UTR CAA 90 bp AGGATCTGTGTGCGAGTGGACAAGGACTCAGAGAAAGGACAAGGGCTACAGAGAGCAGAAATGCAGAACTaGTCAGCGTTAAAAGGGCCA +
Preference number: 5 (lower is better)
Translates to: RICVRVDKDSEKGQGLQRAEMQN*SALKGP
Trigger: TGGCCCTTTTAACGCTGACAAGTTCTGCATTTCTGC...TCTCTGTAGCCCTTGTCCTTTCTCTGAGTCCTTGTCCACTCGCACACAGATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR CAA 90 bp AGAAATAGGCCAGATTCCATTGGGTTGCACATTGGGAGGAGAGCGCTTCCAGTCGTTGCAGTAATTCCTTaGCACTCTTCCGAAAGGCCA +
Preference number: 5 (lower is better)
Translates to: RNRPDSIGLHIGRRALPVVAVIP*HSSERP
Trigger: TGGCCTTTCGGAAGAGTGCAAAGGAATTACTGCAAC...GACTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATGGAATCTGGCCTATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675736.1
CDS-3UTR CAA 90 bp ACCGAACTAGGCTGTGGAGGGCTCTGGATTCCAGTCGACAAATCCAAAACCCTTGTTGCAGTAATTCCTTaGCACTCTTCCGAAAGGCCA +
Preference number: 5 (lower is better)
Translates to: TELGCGGLWIPVDKSKTLVAVIP*HSSERP
Trigger: TGGCCTTTCGGAAGAGTGCAAAGGAATTACTGCAAC...AAGGGTTTTGGATTTGTCGACTGGAATCCAGAGCCCTCCACAGCCTAGTTCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR CAA 90 bp GTGTTCTTTAAGTCTCAAGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGGTTGCAGTAATTCCTTaGCACTCTTCCGAAAGGCCA +
Preference number: 5 (lower is better)
Translates to: VFFKSQVAVPEVVATPLMVAVIP*HSSERP
Trigger: TGGCCTTTCGGAAGAGTGCAAAGGAATTACTGCAAC...CATGAGAGGAGTGGCAACTACCTCTGGCACGGCCACTTGAGACTTAAAGAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR CAA 90 bp GGGATGGGTAAGATCTCCTGGCAAAGAATGGGAGTCCCAATTGGAAATGGGGAGTATCCTTCCTTAGCTTaGCCTGGTGAGCTCATCTTC +
Preference number: 5 (lower is better)
Translates to: GMGKISWQRMGVPIGNGEYPSLA*PGELIF
Trigger: GAAGATGAGCTCACCAGGCAAAGCTAAGGAAGGATA...CTCCCCATTTCCAATTGGGACTCCCATTCTTTGCCAGGAGATCTTACCCATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp ATTCCATTGGGTTGCACATTGGGAGGAGAGCGCTTCCAGTCCCACGTCTTTACATATCCTTCCTTAGCTTaGCCTGGTGAGCTCATCTTC +
Preference number: 5 (lower is better)
Translates to: IPLGCTLGGERFQSHVFTYPSLA*PGELIF
Trigger: GAAGATGAGCTCACCAGGCAAAGCTAAGGAAGGATA...TGTAAAGACGTGGGACTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp CTCTCAGGATGTCTCTGGAGACATTCATGGGTGCCTAACTACCAACAAGTTGTCCAGGCATTTAGCAGGTaGGTGCTGATGGTTCCCTTG +
Preference number: 5 (lower is better)
Translates to: LSGCLWRHSWVPNYQQVVQAFSR*VLMVPL
Trigger: CAAGGGAACCATCAGCACCAACCTGCTAAATGCCTG...GACAACTTGTTGGTAGTTAGGCACCCATGAATGTCTCCAGAGACATCCTGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GCGCTTCCAGTCCCACGTCTTTACAGGAATCTTCCAGGTCTTACCATAGTTGGCTCACTAATGTGGAAATaGAGACTGAAAGGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: ALPVPRLYRNLPGLTIVGSLMWK*RLKGPP
Trigger: TGGGGGCCCTTTCAGTCTCAATTTCCACATTAGTGA...GCCAACTATGGTAAGACCTGGAAGATTCCTGTAAAGACGTGGGACTGGAAGCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTAGGCACTGAAGTGGACACAGCTTTCTaGGCAGGGAACCCCAGAAAA +
Preference number: 5 (lower is better)
Translates to: VSLSRLAGDLYSQSLGTEVDTAF*AGNPRK
Trigger: TTTTCTGGGGTTCCCTGCCAAGAAAGCTGTGTCCAC...TTCAGTGCCTAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS GCA 90 bp TTCGGCATTTCCCCGGTTCCTTTCTTCTTCCTTGTCAGAACACCCTaGACTTCCTTTCCACTAAGAGTTCTTTCACCGTTCAATGCCAGC +
Preference number: 5 (lower is better)
Translates to: FGISPVPFFFLVRTP*TSFPLRVLSPFNAS
Trigger: GCTGGCATTGAACGGTGAAAGAACTCTTAGTGGAAAGGAAGTGCAGGGTGTTCTGACAAGGAAGAAGAAAGGAACCGGGGAAATGCCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS-3UTR CAA 90 bp TTTAAGTCTCAAGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACGCAGAAATGCAGAACTaGTCAGCGTTAAAAGGGCCA +
Preference number: 5 (lower is better)
Translates to: FKSQVAVPEVVATPLMKDAEMQN*SALKGP
Trigger: TGGCCCTTTTAACGCTGACAAGTTCTGCATTTCTGC...GTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCCACTTGAGACTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CAA 90 bp GTCAATGTGTTCTTTAAGTCTCAAGTGGCCGTGCCAGAGGTAGTTGCCACTCCTGCAGAAATGCAGAACTaGTCAGCGTTAAAAGGGCCA +
Preference number: 5 (lower is better)
Translates to: VNVFFKSQVAVPEVVATPAEMQN*SALKGP
Trigger: TGGCCCTTTTAACGCTGACAAGTTCTGCATTTCTGC...AGGAGTGGCAACTACCTCTGGCACGGCCACTTGAGACTTAAAGAACACATTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CAA 90 bp ATAGTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCCCAGATTCCATTGGGTaGCACATTGGGAGGAGAGCG +
Preference number: 5 (lower is better)
Translates to: IVGFNVFEGFTGYMDLHVPDSIG*HIGRRA
Trigger: CGCTCTCCTCCCAATGTGCAACCCAATGGAATCTGG...GACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCAACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp CTAGCCCAGGTCTTAATGATAGTGGAAGACAAGGAGGAAAGAGGGAACGTTGCTATAGGCCAGATTCCATaGGGTTGCACATTGGGAGGA +
Preference number: 5 (lower is better)
Translates to: LAQVLMIVEDKEERGNVAIGQIP*GCTLGG
Trigger: TCCTCCCAATGTGCAACCCAATGGAATCTGGCCTAT...AGCAACGTTCCCTCTTTCCTCCTTGTCTTCCACTATCATTAAGACCTGGGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp CGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACAGAATGGGAGTCCCAATaGGAAATGGGGAGAAATGTG +
Preference number: 5 (lower is better)
Translates to: RGFHRVHGPSCLQTQSSTEWESQ*EMGRNV
Trigger: CACATTTCTCCCCATTTCCAATTGGGACTCCCATTC...TGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp ATGAAAGACTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGCAGGCATTTAGCAGGTaGGTGCTGATGGTTCCCTTG +
Preference number: 5 (lower is better)
Translates to: MKDYQVDRMSGQFADIVQQAFSR*VLMVPL
Trigger: CAAGGGAACCATCAGCACCAACCTGCTAAATGCCTG...CTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTCTTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR CAA 90 bp AGGATCTGTGTGCGAGTGGACAAGGACTCAGAGAAAGGACAAGGGCTACAGAGAAGGGTTCATGGTCATTaGAACAGAAATTCAGGGGTC +
Preference number: 5 (lower is better)
Translates to: RICVRVDKDSEKGQGLQRRVHGH*NRNSGV
Trigger: GACCCCTGAATTTCTGTTCAAATGACCATGAACCCT...TCTCTGTAGCCCTTGTCCTTTCTCTGAGTCCTTGTCCACTCGCACACAGATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR CAA 90 bp AAGGACAAGGGCTACAGAGAAAGGAGCCCGATTGTGTTGACATCCTGGGACCAGAAGGTGTTGCATAAATaGCTAGGTTATGGTGGTAGG +
Preference number: 5 (lower is better)
Translates to: KDKGYRERSPIVLTSWDQKVLHK*LGYGGR
Trigger: CCTACCACCATAACCTAGCAATTTATGCAACACCTT...CTGGTCCCAGGATGTCAACACAATCGGGCTCCTTTCTCTGTAGCCCTTGTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR CAA 90 bp GCAAATGCAGTAAAGTCTCTTGGAACACAGAAAAACTTGCATTGTGAAGTAGAGGCTACGAAGGCCCACTaGGGCTGTCAGGCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: ANAVKSLGTQKNLHCEVEATKAH*GCQASA
Trigger: AGCTGAGGCCTGACAGCCCAAGTGGGCCTTCGTAGC...CTCTACTTCACAATGCAAGTTTTTCTGTGTTCCAAGAGACTTTACTGCATTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675232.1
ENST00000676192.1
CDS-3UTR CAA 90 bp AGAGGAGAGAAGGACAAGTGCTCCCTGCTTAGAGAGGACTGGGTGACTACCTGGTCACTTGGTTGTCTTTaGAAAGTATCTCAGTCGTTT +
Preference number: 5 (lower is better)
Translates to: RGEKDKCSLLREDWVTTWSLGCL*KVSQSF
Trigger: AAACGACTGAGATACTTTCAAAAGACAACCAAGTGA...CCAGGTAGTCACCCAGTCCTCTCTAAGCAGGGAGCACTTGTCCTTCTCTCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp CGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTCAGTTCCAGAGAGGTGCTGCTCACTTGGTaGTCTTTTGAAAGTATCTCA +
Preference number: 5 (lower is better)
Translates to: RMSGQFADIVQGDFSSREVLLTW*SFESIS
Trigger: TGAGATACTTTCAAAAGACAACCAAGTGAGCAGCAC...CTCTCTGGAACTGAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000602661.6
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
CDS-3UTR CAA 90 bp CCTTTGCACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTGCAGAAATGCAGAACTaGTCAGCGTTAAAAGGGCCA +
Preference number: 5 (lower is better)
Translates to: PLHSSERPQLPQCYHQGTAEMQN*SALKGP
Trigger: TGGCCCTTTTAACGCTGACAAGTTCTGCATTTCTGC...AGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTGCAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR CAA 90 bp GCAGGGGGATTTCAGTTCCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTCAGCTCCATTCTTTGTaGATAAATAGTGCTTGTAGT +
Preference number: 5 (lower is better)
Translates to: AGGFQFQRVSLSRLAGDLQLHSL*INSACS
Trigger: ACTACAAGCACTATTTATCAACAAAGAATGGAGCTG...AAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAACTGAAATCCCCCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CAA 90 bp TGCACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTGCTGCCAATTCGGCTTCCTTaGGATTTTGACAAACCAGCT +
Preference number: 5 (lower is better)
Translates to: CTLPKGHSFHSVIIKVLLPIRLP*DFDKPA
Trigger: AGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTGG...CAGCAGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR CAA 90 bp AAAGACTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGCCAATTCGGCTTCCTTaGGATTTTGACAAACCAGCT +
Preference number: 5 (lower is better)
Translates to: KDYQVDRMSGQFADIVQGPIRLP*DFDKPA
Trigger: AGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTGG...CCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CAA 90 bp GGGATGGGTAAGATCTCCTGGCAAAGAATGGGAGTCCCAATTGGAAATGGGGAGGGAACACAGAAAAACTaGCATTGTGAAGTAGAGCCA +
Preference number: 5 (lower is better)
Translates to: GMGKISWQRMGVPIGNGEGTQKN*HCEVEP
Trigger: TGGCTCTACTTCACAATGCAAGTTTTTCTGTGTTCC...CTCCCCATTTCCAATTGGGACTCCCATTCTTTGCCAGGAGATCTTACCCATCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATCGCATGGGAACACAGAAAAACTaGCATTGTGAAGTAGAGCCA +
Preference number: 5 (lower is better)
Translates to: VPEVVATPLMKDYQVDRMGTQKN*HCEVEP
Trigger: TGGCTCTACTTCACAATGCAAGTTTTTCTGTGTTCC...CATGCGATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CAA 90 bp ACCGAACTAGGCTGTGGAGGGCTCTGGATTCCAGTCGACAAATCCAAAACCCTTGGAACACAGAAAAACTaGCATTGTGAAGTAGAGCCA +
Preference number: 5 (lower is better)
Translates to: TELGCGGLWIPVDKSKTLGTQKN*HCEVEP
Trigger: TGGCTCTACTTCACAATGCAAGTTTTTCTGTGTTCC...AAGGGTTTTGGATTTGTCGACTGGAATCCAGAGCCCTCCACAGCCTAGTTCGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR CAA 90 bp GTGTTCTTTAAGTCTCAAGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGGGAACACAGAAAAACTaGCATTGTGAAGTAGAGCCA +
Preference number: 5 (lower is better)
Translates to: VFFKSQVAVPEVVATPLMGTQKN*HCEVEP
Trigger: TGGCTCTACTTCACAATGCAAGTTTTTCTGTGTTCC...CATGAGAGGAGTGGCAACTACCTCTGGCACGGCCACTTGAGACTTAAAGAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CAA 90 bp AGAGCGCTTCCAGTCCCACGTCTTTACAGGAATCTTCCAGGTCTTACCATAGTTTTCCCAAATTTGTGTTaGAGCGGAAGTCCTGCATCC +
Preference number: 5 (lower is better)
Translates to: RALPVPRLYRNLPGLTIVFPNLC*SGSPAS
Trigger: GGATGCAGGACTTCCGCTCAAACACAAATTTGGGAA...AACTATGGTAAGACCTGGAAGATTCCTGTAAAGACGTGGGACTGGAAGCGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675736.1
CDS-3UTR CAA 90 bp TACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTCTCTACCTTCCCAAATTaGTGTTTGAGCGGAAGTCCT +
Preference number: 5 (lower is better)
Translates to: YQVDRMSGQFADIVQGDFSTFPN*CLSGSP
Trigger: AGGACTTCCGCTCAAACACAAATTTGGGAAGGTAGA...GAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR CAA 90 bp CGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACATCTACCTTCCCAAATTaGTGTTTGAGCGGAAGTCCT +
Preference number: 5 (lower is better)
Translates to: RGFHRVHGPSCLQTQSSTSTFPN*CLSGSP
Trigger: AGGACTTCCGCTCAAACACAAATTTGGGAAGGTAGA...TGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000674563.1
ENST00000675736.1
CDS-3UTR CAA 90 bp TCATCAACTTGGACTGACAAACCCAGGGACACTTCCTCCTCACAAACCGTCCTTTCTACCTTCCCAAATTaGTGTTTGAGCGGAAGTCCT +
Preference number: 5 (lower is better)
Translates to: SSTWTDKPRDTSSSQTVLSTFPN*CLSGSP
Trigger: AGGACTTCCGCTCAAACACAAATTTGGGAAGGTAGA...AAGGACGGTTTGTGAGGAGGAAGTGTCCCTGGGTTTGTCAGTCCAAGTTGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR CAA 90 bp AAAGTAGCACTAACATACCAGCTTAAATGCCCAGAAGAGGAGTGGGTTATTCTTCCATTGGGTTGCACATaGGGAGGAGAGCGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: KVALTYQLKCPEEEWVILPLGCT*GGERFQ
Trigger: CTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATGG...AAGAATAACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGTTAGTGCTACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp AAAGACTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGAAACCTGTACAGAACTaGAACTCTTCAAAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: KDYQVDRMSGQFADIVQGKPVQN*NSSKGG
Trigger: CCCACCCTTTGAAGAGTTCAAGTTCTGTACAGGTTT...CCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
CDS-3UTR CAA 90 bp GGAGACATTCATGGGTGCCTAACTACCAACAAGTTGTCAACTTCCCCAGGTAAGTATCCTTCCTTAGCTTaGCCTGGTGAGCTCATCTTC +
Preference number: 5 (lower is better)
Translates to: GDIHGCLTTNKLSTSPGKYPSLA*PGELIF
Trigger: GAAGATGAGCTCACCAGGCAAAGCTAAGGAAGGATA...CTTACCTGGGGAAGTTGACAACTTGTTGGTAGTTAGGCACCCATGAATGTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTAGGCACTGAATATCCTTCCTTAGCTTaGCCTGGTGAGCTCATCTTC +
Preference number: 5 (lower is better)
Translates to: VSLSRLAGDLYSQSLGTEYPSLA*PGELIF
Trigger: GAAGATGAGCTCACCAGGCAAAGCTAAGGAAGGATA...TTCAGTGCCTAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
CDS-3UTR CAA 90 bp GGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATCGTTCAGGTTTCCATTCTaGAGACTACTATTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: GRARGSCHSSHERLPSGSFRFPF*RLLLFS
Trigger: AGAGAACAATAGTAGTCTCAAGAATGGAAACCTGAA...CGATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000642537.1
ENST00000645933.1
ENST00000675736.1
CDS-3UTR CAA 90 bp AGAGGAGAGAAGGACAAGTGCTCCCTGCTTAGAGAGGACTGGGTGACTACCTGGTCAAAGGTTTTCATGTaGCTTTACAAATCCGGAATG +
Preference number: 5 (lower is better)
Translates to: RGEKDKCSLLREDWVTTWSKVFM*LYKSGM
Trigger: CATTCCGGATTTGTAAAGCAACATGAAAACCTTTGA...CCAGGTAGTCACCCAGTCCTCTCTAAGCAGGGAGCACTTGTCCTTCTCTCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATCGTCAAAGGTTTTCATGTaGCTTTACAAATCCGGAATG +
Preference number: 5 (lower is better)
Translates to: GRARGSCHSSHERLPSGSSKVFM*LYKSGM
Trigger: CATTCCGGATTTGTAAAGCAACATGAAAACCTTTGA...CGATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000642537.1
ENST00000645933.1
ENST00000675736.1
CDS-3UTR CAA 90 bp CTAGCCCAGGTCTTAATGATAGTGGAAGACAAGGAGGAAAGAGGGAACGTTGCTGAATGGGAGTCCCAATaGGAAATGGGGAGAAATGTG +
Preference number: 5 (lower is better)
Translates to: LAQVLMIVEDKEERGNVAEWESQ*EMGRNV
Trigger: CACATTTCTCCCCATTTCCAATTGGGACTCCCATTC...AGCAACGTTCCCTCTTTCCTCCTTGTCTTCCACTATCATTAAGACCTGGGCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GCGCTTCCAGTCCCACGTCTTTACAGGAATCTTCCAGGTCTTACCATAGTTGGCGGTCAATTTCAGGTTTaGCAGCTAGGGAATCAAAGA +
Preference number: 5 (lower is better)
Translates to: ALPVPRLYRNLPGLTIVGGQFQV*QLGNQR
Trigger: TCTTTGATTCCCTAGCTGCAAAACCTGAAATTGACC...GCCAACTATGGTAAGACCTGGAAGATTCCTGTAAAGACGTGGGACTGGAAGCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp CGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACATTTTATGGCAACACATaGCCTTCCCTGAGTGAGATG +
Preference number: 5 (lower is better)
Translates to: RGFHRVHGPSCLQTQSSTFYGNT*PSLSEM
Trigger: CATCTCACTCAGGGAAGGCAATGTGTTGCCATAAAA...TGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATCGCATGTCTAGGGTAGAAGTTTaGATAGTACGGAAGCAGAGA +
Preference number: 5 (lower is better)
Translates to: VPEVVATPLMKDYQVDRMSRVEV*IVRKQR
Trigger: TCTCTGCTTCCGTACTATCAAAACTTCTACCCTAGA...CATGCGATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000642952.1
CDS-3UTR CAA 90 bp TCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTCAGTTCCAGAGAACACACTTCCCAAATTaGTGTTTGAGCGGAAGTCCT +
Preference number: 5 (lower is better)
Translates to: SHEWPVCRYSAGGFQFQRTHFPN*CLSGSP
Trigger: AGGACTTCCGCTCAAACACAAATTTGGGAAGTGTGT...TCTCTGGAACTGAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642952.1
ENST00000645933.1
CDS-3UTR CAA 90 bp ACCGAACTAGGCTGTGGAGGGCTCTGGATTCCAGTCGACAAATCCAAAACCCTTTCACATGCCAGAAATTaGCTTTTTCTGCTAAGCAGG +
Preference number: 5 (lower is better)
Translates to: TELGCGGLWIPVDKSKTLSHARN*LFLLSR
Trigger: CCTGCTTAGCAGAAAAAGCAAATTTCTGGCATGTGA...AAGGGTTTTGGATTTGTCGACTGGAATCCAGAGCCCTCCACAGCCTAGTTCGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR CAA 90 bp TTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCAATCAAGTCCTGCGTATaGTTCTTTCGGCATTTCCCC +
Preference number: 5 (lower is better)
Translates to: FEGFTGYMDLHVYKLSPAIKSCV*FFRHFP
Trigger: GGGGAAATGCCGAAAGAACAATACGCAGGACTTGAT...TGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS-3UTR CAA 90 bp TCATCAACTTGGACTGACAAACCCAGGGACACTTCCTCCTCACAAACCGTCCTTGTGCTGCTCACTTGGTaGTCTTTTGAAAGTATCTCA +
Preference number: 5 (lower is better)
Translates to: SSTWTDKPRDTSSSQTVLVLLTW*SFESIS
Trigger: TGAGATACTTTCAAAAGACAACCAAGTGAGCAGCAC...AAGGACGGTTTGTGAGGAGGAAGTGTCCCTGGGTTTGTCAGTCCAAGTTGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR CAA 90 bp CCTCTCATGAAAGACTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGCAGAAATGCAGAACTaGTCAGCGTTAAAAGGGCCA +
Preference number: 5 (lower is better)
Translates to: PLMKDYQVDRMSGQFADIAEMQN*SALKGP
Trigger: TGGCCCTTTTAACGCTGACAAGTTCTGCATTTCTGC...TATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTCTTTCATGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CAA 90 bp TTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACCAATTCGGCTTCCTTaGGATTTTGACAAACCAGCT +
Preference number: 5 (lower is better)
Translates to: FEGFTGYMDLHVYKLSPAPIRLP*DFDKPA
Trigger: AGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTGG...TGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp CTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTGGAACACAGAAAAACTaGCATTGTGAAGTAGAGCCA +
Preference number: 5 (lower is better)
Translates to: LPSGSHEWPVCRYSAGGFGTQKN*HCEVEP
Trigger: TGGCTCTACTTCACAATGCAAGTTTTTCTGTGTTCC...AAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CAA 90 bp CAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTAGGCGGAACACAGAAAAACTaGCATTGTGAAGTAGAGCCA +
Preference number: 5 (lower is better)
Translates to: QRVSLSRLAGDLYSQSLGGTQKN*HCEVEP
Trigger: TGGCTCTACTTCACAATGCAAGTTTTTCTGTGTTCC...GCCTAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CAA 90 bp TTTAAGTCTCAAGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACGGAACACAGAAAAACTaGCATTGTGAAGTAGAGCCA +
Preference number: 5 (lower is better)
Translates to: FKSQVAVPEVVATPLMKDGTQKN*HCEVEP
Trigger: TGGCTCTACTTCACAATGCAAGTTTTTCTGTGTTCC...GTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCCACTTGAGACTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CAA 90 bp TCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACGGAACACAGAAAAACTaGCATTGTGAAGTAGAGCCA +
Preference number: 5 (lower is better)
Translates to: SRVSQGTWTFMSTNSVQHGTQKN*HCEVEP
Trigger: TGGCTCTACTTCACAATGCAAGTTTTTCTGTGTTCC...GTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp ATGGACCTAGGGAATAGCCCTATCCAGGCCCTGGAAAAGGGTTCATGGTCATTTGGAACACAGAAAAACTaGCATTGTGAAGTAGAGCCA +
Preference number: 5 (lower is better)
Translates to: MDLGNSPIQALEKGSWSFGTQKN*HCEVEP
Trigger: TGGCTCTACTTCACAATGCAAGTTTTTCTGTGTTCC...AAATGACCATGAACCCTTTTCCAGGGCCTGGATAGGGCTATTCCCTAGGTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR CAA 90 bp ATTATAATACAAGTGCAAGGGTGGAGGAGAGGGCAGCCCAGACAAATACAACTGGTTGCAGTAATTCCTTaGCACTCTTCCGAAAGGCCA +
Preference number: 5 (lower is better)
Translates to: IIIQVQGWRRGQPRQIQLVAVIP*HSSERP
Trigger: TGGCCTTTCGGAAGAGTGCAAAGGAATTACTGCAAC...CAGTTGTATTTGTCTGGGCTGCCCTCTCCTCCACCCTTGCACTTGTATTATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR CAA 90 bp AGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGAAATGGTACTCCCAATTaGTTTAATGTTTTCGCTGCT +
Preference number: 5 (lower is better)
Translates to: SGRARGSCHSSHERLPSGNGTPN*FNVFAA
Trigger: AGCAGCGAAAACATTAAACAAATTGGGAGTACCATT...TCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR CAA 90 bp AGGAATTATAATACAAGTGCAAGGGTGGAGGAGAGGGCAGCCCAGACAAATACATTCCCAAATTTGTGTTaGAGCGGAAGTCCTGCATCC +
Preference number: 5 (lower is better)
Translates to: RNYNTSARVEERAAQTNTFPNLC*SGSPAS
Trigger: GGATGCAGGACTTCCGCTCAAACACAAATTTGGGAA...TGTATTTGTCTGGGCTGCCCTCTCCTCCACCCTTGCACTTGTATTATAATTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR CAA 90 bp ATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCTCTACCTTCCCAAATTaGTGTTTGAGCGGAAGTCCT +
Preference number: 5 (lower is better)
Translates to: IRGFHRVHGPSCLQTQSSSTFPN*CLSGSP
Trigger: AGGACTTCCGCTCAAACACAAATTTGGGAAGGTAGA...GCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000674563.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GTTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAACCAGATTCCATTGGGTaGCACATTGGGAGGAGAGCG +
Preference number: 5 (lower is better)
Translates to: VSILETTIVLWCQRKICQPDSIG*HIGRRA
Trigger: CGCTCTCCTCCCAATGTGCAACCCAATGGAATCTGG...TTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAAATAGGCCAGATTCCATaGGGTTGCACATTGGGAGGA +
Preference number: 5 (lower is better)
Translates to: GFNVFEGFTGYMDLHVYKIGQIP*GCTLGG
Trigger: TCCTCCCAATGTGCAACCCAATGGAATCTGGCCTAT...TTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp ATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCATAGGCCAGATTCCATaGGGTTGCACATTGGGAGGA +
Preference number: 5 (lower is better)
Translates to: MYSRVSQGTWTFMSTNSVIGQIP*GCTLGG
Trigger: TCCTCCCAATGTGCAACCCAATGGAATCTGGCCTAT...GACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GGGATGGGTAAGATCTCCTGGCAAAGAATGGGAGTCCCAATTGGAAATGGGGAGTCTCACTTGAATGATTaGTCAACAAGTGCCATCAGA +
Preference number: 5 (lower is better)
Translates to: GMGKISWQRMGVPIGNGESHLND*STSAIR
Trigger: TCTGATGGCACTTGTTGACAAATCATTCAAGTGAGA...CTCCCCATTTCCAATTGGGACTCCCATTCTTTGCCAGGAGATCTTACCCATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GACCTCTCTGTCGCCTTAGGTTCTCAATCTGAACAAAAAGATACTAAGCGGCAGGAATGGGAGTCCCAATaGGAAATGGGGAGAAATGTG +
Preference number: 5 (lower is better)
Translates to: DLSVALGSQSEQKDTKRQEWESQ*EMGRNV
Trigger: CACATTTCTCCCCATTTCCAATTGGGACTCCCATTC...CTGCCGCTTAGTATCTTTTTGTTCAGATTGAGAACCTAAGGCGACAGAGAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp CTAGCCCAGGTCTTAATGATAGTGGAAGACAAGGAGGAAAGAGGGAACGTTGCTCTAACTACCAACAAGTaGTCAACTTCCCCAGGTAAG +
Preference number: 5 (lower is better)
Translates to: LAQVLMIVEDKEERGNVALTTNK*STSPGK
Trigger: CTTACCTGGGGAAGTTGACAACTTGTTGGTAGTTAG...AGCAACGTTCCCTCTTTCCTCCTTGTCTTCCACTATCATTAAGACCTGGGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GTTTTCGCTGCTAGTTGCAGTAATTCCTTTGCACTCTTCCGAAAGGCCACAGCTCAATTAAGAGGAATCTaGCCTCTCAGGATGTCTCTG +
Preference number: 5 (lower is better)
Translates to: VFAASCSNSFALFRKATAQLRGI*PLRMSL
Trigger: CAGAGACATCCTGAGAGGCAAGATTCCTCTTAATTG...AGCTGTGGCCTTTCGGAAGAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GGGTTAGAAGGTGCCAGGGGGTATTCTAGGGTAGAAGTTTTGATAGTACGGAAGTGGGTGACTACCTGGTaGTCCTGGTTATCAATTAAG +
Preference number: 5 (lower is better)
Translates to: GLEGARGYSRVEVLIVRKWVTTW*SWLSIK
Trigger: CTTAATTGATAACCAGGACAACCAGGTAGTCACCCA...CTTCCGTACTATCAAAACTTCTACCCTAGAATACCCCCTGGCACCTTCTAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR CAA 90 bp GCACTAACATACCAGCTTAAATGCCCAGAAGAGGAGTGGGTTATTCTTTTCAACCAGGCATTTAGCAGGTaGGTGCTGATGGTTCCCTTG +
Preference number: 5 (lower is better)
Translates to: ALTYQLKCPEEEWVILFNQAFSR*VLMVPL
Trigger: CAAGGGAACCATCAGCACCAACCTGCTAAATGCCTG...GTTGAAAAGAATAACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGTTAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GTTGGGTTAGAAGGTGCCAGGGGGTATTCTAGGGTAGAAGTTTTGATAGTACGGTTTTATGGCAACACATaGCCTTCCCTGAGTGAGATG +
Preference number: 5 (lower is better)
Translates to: VGLEGARGYSRVEVLIVRFYGNT*PSLSEM
Trigger: CATCTCACTCAGGGAAGGCAATGTGTTGCCATAAAA...CCGTACTATCAAAACTTCTACCCTAGAATACCCCCTGGCACCTTCTAACCCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000675695.1
CDS-3UTR CAA 90 bp TACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTCTCTTCAACTTTTTGCTaGCGTACCGTGGAAGTAAAG +
Preference number: 5 (lower is better)
Translates to: YQVDRMSGQFADIVQGDFSSTFC*RTVEVK
Trigger: CTTTACTTCCACGGTACGCAAGCAAAAAGTTGAAGA...GAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000374705.5
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
CDS-3UTR CAA 90 bp CAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTAGGCTCTTCAACTTTTTGCTaGCGTACCGTGGAAGTAAAG +
Preference number: 5 (lower is better)
Translates to: QRVSLSRLAGDLYSQSLGSSTFC*RTVEVK
Trigger: CTTTACTTCCACGGTACGCAAGCAAAAAGTTGAAGA...GCCTAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374705.5
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
CDS-3UTR CAA 90 bp AAGGACAAGGGCTACAGAGAAAGGAGCCCGATTGTGTTGACATCCTGGGACCAGATACAACTGTGTGCTTaGAACATGGGAATAGTATGT +
Preference number: 5 (lower is better)
Translates to: KDKGYRERSPIVLTSWDQIQLCA*NMGIVC
Trigger: ACATACTATTCCCATGTTCAAAGCACACAGTTGTAT...CTGGTCCCAGGATGTCAACACAATCGGGCTCCTTTCTCTGTAGCCCTTGTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR CAA 90 bp GAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATCGCATGAGTGGCAACCCCACTGTAAATTaGCCTGTTTTCACTGTATCT +
Preference number: 5 (lower is better)
Translates to: EVVATPLMKDYQVDRMSGNPTVN*PVFTVS
Trigger: AGATACAGTGAAAACAGGCAAATTTACAGTGGGGTT...GCCACTCATGCGATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CAA 90 bp GCACTGAAATCCCATATTCTCAGCTATCCGAAACCAGCCTTCCCCTGTAATCCCGTGGGTCTTGGGCACTaGACAGTTATATACTTCATT +
Preference number: 5 (lower is better)
Translates to: ALKSHILSYPKPAFPCNPVGLGH*TVIYFI
Trigger: AATGAAGTATATAACTGTCAAGTGCCCAAGACCCAC...GGGATTACAGGGGAAGGCTGGTTTCGGATAGCTGAGAATATGGGATTTCAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675232.1
CDS-3UTR CAA 90 bp TTTAAGTCTCAAGTGGCCGTGCCAGAGGTAGTTGCCACTCCTCTCATGAAAGACAAGAAAGGCGGCTGCTaGATGAGGTCTATTAGATTA +
Preference number: 5 (lower is better)
Translates to: FKSQVAVPEVVATPLMKDKKGGC*MRSIRL
Trigger: TAATCTAATAGACCTCATCAAGCAGCCGCCTTTCTT...GTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGGCCACTTGAGACTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS GCA 90 bp AAATTTGCTTTTTCTGCTAAGCAGGATCTGGCTGGATTAGACGGTTaGCCAGTTTGGGCTCCAAAGCAAACTCTTCCACTCTCCAACTAT +
Preference number: 5 (lower is better)
Translates to: KFAFSAKQDLAGLDG*PVWAPKQTLPLSNY
Trigger: ATAGTTGGAGAGTGGAAGAGTTTGCTTTGGAGCCCAAACTGGGCAACCGTCTAATCCAGCCAGATCCTGCTTAGCAGAAAAAGCAAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR CAA 90 bp GTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTAGGCACTGAAGTGCTGCTCACTTGGTaGTCTTTTGAAAGTATCTCA +
Preference number: 5 (lower is better)
Translates to: VSLSRLAGDLYSQSLGTEVLLTW*SFESIS
Trigger: TGAGATACTTTCAAAAGACAACCAAGTGAGCAGCAC...TTCAGTGCCTAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000602661.6
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
CDS-3UTR CAA 90 bp ATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCGCAGAAATGCAGAACTaGTCAGCGTTAAAAGGGCCA +
Preference number: 5 (lower is better)
Translates to: MYSRVSQGTWTFMSTNSVAEMQN*SALKGP
Trigger: TGGCCCTTTTAACGCTGACAAGTTCTGCATTTCTGC...GACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACGCAGAAATGCAGAACTaGTCAGCGTTAAAAGGGCCA +
Preference number: 5 (lower is better)
Translates to: ASMYSRVSQGTWTFMSTNAEMQN*SALKGP
Trigger: TGGCCCTTTTAACGCTGACAAGTTCTGCATTTCTGC...GTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp CCAGTCGACAAATCCAAAACCCTTGCTGATCCCATAAAACCCTATAGATCTGCAGCAGAAATGCAGAACTaGTCAGCGTTAAAAGGGCCA +
Preference number: 5 (lower is better)
Translates to: PVDKSKTLADPIKPYRSAAEMQN*SALKGP
Trigger: TGGCCCTTTTAACGCTGACAAGTTCTGCATTTCTGC...TGCAGATCTATAGGGTTTTATGGGATCAGCAAGGGTTTTGGATTTGTCGACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR CAA 90 bp AGGATCTGTGTGCGAGTGGACAAGGACTCAGAGAAAGGACAAGGGCTACAGAGACAGCTCCATTCTTTGTaGATAAATAGTGCTTGTAGT +
Preference number: 5 (lower is better)
Translates to: RICVRVDKDSEKGQGLQRQLHSL*INSACS
Trigger: ACTACAAGCACTATTTATCAACAAAGAATGGAGCTG...TCTCTGTAGCCCTTGTCCTTTCTCTGAGTCCTTGTCCACTCGCACACAGATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR CAA 90 bp AGGATCTGTGTGCGAGTGGACAAGGACTCAGAGAAAGGACAAGGGCTACAGAGAAACCAGCTCCATTCTTaGTTGATAAATAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: RICVRVDKDSEKGQGLQRNQLHS*LINSAC
Trigger: ACAAGCACTATTTATCAACAAAGAATGGAGCTGGTT...TCTCTGTAGCCCTTGTCCTTTCTCTGAGTCCTTGTCCACTCGCACACAGATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR CAA 90 bp CTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTGCTGAAAGAACCAATTCGGCTTCCTTaGGATTTTGACAAACCAGCT +
Preference number: 5 (lower is better)
Translates to: LPKGHSFHSVIIKVLLKEPIRLP*DFDKPA
Trigger: AGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTGG...TTCTTTCAGCAGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR CAA 90 bp TTCCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTACCAATTCGGCTTCCTTaGGATTTTGACAAACCAGCT +
Preference number: 5 (lower is better)
Translates to: FQRVSLSRLAGDLYSQSLPIRLP*DFDKPA
Trigger: AGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTGG...TAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CAA 90 bp ATTATAATACAAGTGCAAGGGTGGAGGAGAGGGCAGCCCAGACAAATACAACTGCCAATTCGGCTTCCTTaGGATTTTGACAAACCAGCT +
Preference number: 5 (lower is better)
Translates to: IIIQVQGWRRGQPRQIQLPIRLP*DFDKPA
Trigger: AGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTGG...CAGTTGTATTTGTCTGGGCTGCCCTCTCCTCCACCCTTGCACTTGTATTATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR CAA 90 bp TTGCACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTGCTGGAACACAGAAAAACTaGCATTGTGAAGTAGAGCCA +
Preference number: 5 (lower is better)
Translates to: LHSSERPQLPQCYHQGTAGTQKN*HCEVEP
Trigger: TGGCTCTACTTCACAATGCAAGTTTTTCTGTGTTCC...AGCAGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR CAA 90 bp ATCCCATATTCTCAGCTATCCGAAACCAGCCTTCCTCATTCTTCCATAGGTGATGTTGCAGTAATTCCTTaGCACTCTTCCGAAAGGCCA +
Preference number: 5 (lower is better)
Translates to: IPYSQLSETSLPHSSIGDVAVIP*HSSERP
Trigger: TGGCCTTTCGGAAGAGTGCAAAGGAATTACTGCAAC...ATCACCTATGGAAGAATGAGGAAGGCTGGTTTCGGATAGCTGAGAATATGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000676371.1
CDS-3UTR CAA 90 bp ATGATAGAAAATCTGGGACTCACACCATCTGTCCAGACAGTTCTATCACTGCTCGTTGCAGTAATTCCTTaGCACTCTTCCGAAAGGCCA +
Preference number: 5 (lower is better)
Translates to: MIENLGLTPSVQTVLSLLVAVIP*HSSERP
Trigger: TGGCCTTTCGGAAGAGTGCAAAGGAATTACTGCAAC...GAGCAGTGATAGAACTGTCTGGACAGATGGTGTGAGTCCCAGATTTTCTATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR CAA 90 bp AGCTTGTGGTCTTTTTATGGCAACACATTGCCTTCCCTGAGTGAGATGTTAGAGGTTGCAGTAATTCCTTaGCACTCTTCCGAAAGGCCA +
Preference number: 5 (lower is better)
Translates to: SLWSFYGNTLPSLSEMLEVAVIP*HSSERP
Trigger: TGGCCTTTCGGAAGAGTGCAAAGGAATTACTGCAAC...CTCTAACATCTCACTCAGGGAAGGCAATGTGTTGCCATAAAAAGACCACAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GACTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATAATGGTACTCCCAATTaGTTTAATGTTTTCGCTGCT +
Preference number: 5 (lower is better)
Translates to: DYQVDRMSGQFADIVQGDNGTPN*FNVFAA
Trigger: AGCAGCGAAAACATTAAACAAATTGGGAGTACCATT...ATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR CAA 90 bp AGGTCTTACCATAGTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGATTCCCAAATTTGTGTTaGAGCGGAAGTCCTGCATCC +
Preference number: 5 (lower is better)
Translates to: RSYHSWLQCIRGFHRVHGFPNLC*SGSPAS
Trigger: GGATGCAGGACTTCCGCTCAAACACAAATTTGGGAA...TCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCAACTATGGTAAGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675736.1
CDS-3UTR CAA 90 bp ATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCTTCCCAAATTTGTGTTaGAGCGGAAGTCCTGCATCC +
Preference number: 5 (lower is better)
Translates to: MYSRVSQGTWTFMSTNSVFPNLC*SGSPAS
Trigger: GGATGCAGGACTTCCGCTCAAACACAAATTTGGGAA...GACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000674563.1
ENST00000675736.1
CDS-3UTR CAA 90 bp ATAGTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTTCCCAAATTTGTGTTaGAGCGGAAGTCCTGCATCC +
Preference number: 5 (lower is better)
Translates to: IVGFNVFEGFTGYMDLHVFPNLC*SGSPAS
Trigger: GGATGCAGGACTTCCGCTCAAACACAAATTTGGGAA...GACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCAACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000674563.1
ENST00000675736.1
CDS-3UTR CAA 90 bp AAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTCTCCATTGGGTTGCACATaGGGAGGAGAGCGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: KVFMLLYKSGMGGCKLLSPLGCT*GGERFQ
Trigger: CTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATGG...AGAAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTCTCTACCATTGGGTTGCACATaGGGAGGAGAGCGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: VFMLLYKSGMGGCKLLSLPLGCT*GGERFQ
Trigger: CTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATGG...TAGAGAAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp TCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTCCAGATTCCATTGGGTaGCACATTGGGAGGAGAGCG +
Preference number: 5 (lower is better)
Translates to: SNLFSKKSTSPFPQTFRFPDSIG*HIGRRA
Trigger: CGCTCTCCTCCCAATGTGCAACCCAATGGAATCTGG...AAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp CGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTCAGTTCCAGAGAGTCAAAGTCTGATCACTaGAATATTAACTCAGACTCC +
Preference number: 5 (lower is better)
Translates to: RMSGQFADIVQGDFSSRESKSDH*NINSDS
Trigger: GGAGTCTGAGTTAATATTCAAGTGATCAGACTTTGA...CTCTCTGGAACTGAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
CDS-3UTR CAA 90 bp GAGGTAGTTGCCACTCCTCTCATGAAAGACTACCAAGTGGATCGCATGAGTGGCTCAAAGTCTGATCACTaGAATATTAACTCAGACTCC +
Preference number: 5 (lower is better)
Translates to: EVVATPLMKDYQVDRMSGSKSDH*NINSDS
Trigger: GGAGTCTGAGTTAATATTCAAGTGATCAGACTTTGA...GCCACTCATGCGATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
CDS-3UTR CAA 90 bp TACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTCTCTCACTTGAATGATTaGTCAACAAGTGCCATCAGA +
Preference number: 5 (lower is better)
Translates to: YQVDRMSGQFADIVQGDFSHLND*STSAIR
Trigger: TCTGATGGCACTTGTTGACAAATCATTCAAGTGAGA...GAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
CDS-3UTR CAA 90 bp ATTCCATTGGGTTGCACATTGGGAGGAGAGCGCTTCCAGTCCCACGTCTTTACAGTAACATGGTCTCACTaGAATGATTTGTCAACAAGT +
Preference number: 5 (lower is better)
Translates to: IPLGCTLGGERFQSHVFTVTWSH*NDLSTS
Trigger: ACTTGTTGACAAATCATTCAAGTGAGACCATGTTAC...TGTAAAGACGTGGGACTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTCAGTTCCAGTCAAAGGTTTTCATGTaGCTTTACAAATCCGGAATG +
Preference number: 5 (lower is better)
Translates to: GSHEWPVCRYSAGGFQFQSKVFM*LYKSGM
Trigger: CATTCCGGATTTGTAAAGCAACATGAAAACCTTTGA...CTGGAACTGAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000642537.1
ENST00000645933.1
ENST00000675736.1
CDS-3UTR CAA 90 bp AGGCCTGAGGCTAAGAACTGTATACTTCATTTAATCCCCCTAAAAACCCTTAGACAGGCATTTAGCAGGTaGGTGCTGATGGTTCCCTTG +
Preference number: 5 (lower is better)
Translates to: RPEAKNCILHLIPLKTLRQAFSR*VLMVPL
Trigger: CAAGGGAACCATCAGCACCAACCTGCTAAATGCCTG...TCTAAGGGTTTTTAGGGGGATTAAATGAAGTATACAGTTCTTAGCCTCAGGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp ATGAAAGACTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGAGGAAAGAGGGAACGTaGCTGGGATTTTTCTTGAGA +
Preference number: 5 (lower is better)
Translates to: MKDYQVDRMSGQFADIVQRKEGT*LGFFLR
Trigger: TCTCAAGAAAAATCCCAGCAACGTTCCCTCTTTCCT...CTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTCTTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR CAA 90 bp AGCTTGTGGTCTTTTTATGGCAACACATTGCCTTCCCTGAGTGAGATGTTAGAGTCACTAATGTGGAAATaGAGACTGAAAGGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: SLWSFYGNTLPSLSEMLESLMWK*RLKGPP
Trigger: TGGGGGCCCTTTCAGTCTCAATTTCCACATTAGTGA...CTCTAACATCTCACTCAGGGAAGGCAATGTGTTGCCATAAAAAGACCACAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp ATAGTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTCACTAATGTGGAAATaGAGACTGAAAGGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: IVGFNVFEGFTGYMDLHVSLMWK*RLKGPP
Trigger: TGGGGGCCCTTTCAGTCTCAATTTCCACATTAGTGA...GACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCAACTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGTGCCAGAGTTCCTTTCTTCTTCCTaGTCAGAACACCCTGCACTT +
Preference number: 5 (lower is better)
Translates to: GNKFPVNVFFKSQVAVPEFLSSS*SEHPAL
Trigger: AAGTGCAGGGTGTTCTGACAAGGAAGAAGAAAGGAA...CTCTGGCACGGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS-3UTR CAA 90 bp TCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACTCACTTGGTTGTCTTTaGAAAGTATCTCAGTCGTTT +
Preference number: 5 (lower is better)
Translates to: SRVSQGTWTFMSTNSVQHSLGCL*KVSQSF
Trigger: AAACGACTGAGATACTTTCAAAAGACAACCAAGTGA...GTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GACCTCTCTGTCGCCTTAGGTTCTCAATCTGAACAAAAAGATACTAAGCGGCAGGTGCTGCTCACTTGGTaGTCTTTTGAAAGTATCTCA +
Preference number: 5 (lower is better)
Translates to: DLSVALGSQSEQKDTKRQVLLTW*SFESIS
Trigger: TGAGATACTTTCAAAAGACAACCAAGTGAGCAGCAC...CTGCCGCTTAGTATCTTTTTGTTCAGATTGAGAACCTAAGGCGACAGAGAGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GTAACTCTGGCCTGTCAAAAGCTCCTGGATAACGACCAAACTGTAACTTTCGGAGTGCTGCTCACTTGGTaGTCTTTTGAAAGTATCTCA +
Preference number: 5 (lower is better)
Translates to: VTLACQKLLDNDQTVTFGVLLTW*SFESIS
Trigger: TGAGATACTTTCAAAAGACAACCAAGTGAGCAGCAC...TCCGAAAGTTACAGTTTGGTCGTTATCCAGGAGCTTTTGACAGGCCAGAGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000602661.6
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
CDS-3UTR CAA 90 bp CCACGTCTTTACAGGAATCTTCCAGGTCTTACCATAGTTGGCTTCAATGTATTCGCAGAAATGCAGAACTaGTCAGCGTTAAAAGGGCCA +
Preference number: 5 (lower is better)
Translates to: PRLYRNLPGLTIVGFNVFAEMQN*SALKGP
Trigger: TGGCCCTTTTAACGCTGACAAGTTCTGCATTTCTGC...GAATACATTGAAGCCAACTATGGTAAGACCTGGAAGATTCCTGTAAAGACGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp TCAGTTCCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCCAGCTCCATTCTTTGTaGATAAATAGTGCTTGTAGT +
Preference number: 5 (lower is better)
Translates to: SVPESESIPSSRGSLLSIQLHSL*INSACS
Trigger: ACTACAAGCACTATTTATCAACAAAGAATGGAGCTG...GATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CAA 90 bp GGCATATGGCTGGGGGAATCTTCCAAAGAAACTACTCTACTCAGCCATCTCCTGCAGCTCCATTCTTTGTaGATAAATAGTGCTTGTAGT +
Preference number: 5 (lower is better)
Translates to: GIWLGESSKETTLLSHLLQLHSL*INSACS
Trigger: ACTACAAGCACTATTTATCAACAAAGAATGGAGCTG...CAGGAGATGGCTGAGTAGAGTAGTTTCTTTGGAAGATTCCCCCAGCCATATGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR CAA 90 bp GAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTAGGCACCAGCTCCATTCTTTGTaGATAAATAGTGCTTGTAGT +
Preference number: 5 (lower is better)
Translates to: ESESIPSSRGSLLSIFRHQLHSL*INSACS
Trigger: ACTACAAGCACTATTTATCAACAAAGAATGGAGCTG...GTGCCTAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CAA 90 bp GTCAATGTGTTCTTTAAGTCTCAAGTGGCCGTGCCAGAGGTAGTTGCCACTCCTAACCAGCTCCATTCTTaGTTGATAAATAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: VNVFFKSQVAVPEVVATPNQLHS*LINSAC
Trigger: ACAAGCACTATTTATCAACAAAGAATGGAGCTGGTT...AGGAGTGGCAACTACCTCTGGCACGGCCACTTGAGACTTAAAGAACACATTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CAA 90 bp GCCTGGCCTTCAGATTCTAGAGAAGGCTTTTGTTTCCCCAAGTTAGGGTGGAACAACCAGCTCCATTCTTaGTTGATAAATAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: AWPSDSREGFCFPKLGWNNQLHS*LINSAC
Trigger: ACAAGCACTATTTATCAACAAAGAATGGAGCTGGTT...GTTCCACCCTAACTTGGGGAAACAAAAGCCTTCTCTAGAATCTGAAGGCCAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp TCCCTTAGGACAGGAAGAGCGGTCAAGTTTAAGCACAAAACTCCATCTCTTCTACCAATTCGGCTTCCTTaGGATTTTGACAAACCAGCT +
Preference number: 5 (lower is better)
Translates to: SLRTGRAVKFKHKTPSLLPIRLP*DFDKPA
Trigger: AGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTGG...TAGAAGAGATGGAGTTTTGTGCTTAAACTTGACCGCTCTTCCTGTCCTAAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CAA 90 bp GATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTCAGTTCCAGAAATGGTACTCCCAATTaGTTTAATGTTTTCGCTGCT +
Preference number: 5 (lower is better)
Translates to: DRMSGQFADIVQGDFSSRNGTPN*FNVFAA
Trigger: AGCAGCGAAAACATTAAACAAATTGGGAGTACCATT...TCTGGAACTGAAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR CAA 90 bp CTGTCAAATAGGATCTGTGTGCGAGTGGACAAGGACTCAGAGAAAGGACAAGGGAATGGTACTCCCAATTaGTTTAATGTTTTCGCTGCT +
Preference number: 5 (lower is better)
Translates to: LSNRICVRVDKDSEKGQGNGTPN*FNVFAA
Trigger: AGCAGCGAAAACATTAAACAAATTGGGAGTACCATT...CCCTTGTCCTTTCTCTGAGTCCTTGTCCACTCGCACACAGATCCTATTTGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR CAA 90 bp AGGAGCTTGTTAATGGGTCCCTACAAAATCTCTGTATTAGGTTGGGTTAGAAGGTTCCCAAATTTGTGTTaGAGCGGAAGTCCTGCATCC +
Preference number: 5 (lower is better)
Translates to: RSLLMGPYKISVLGWVRRFPNLC*SGSPAS
Trigger: GGATGCAGGACTTCCGCTCAAACACAAATTTGGGAA...CCTTCTAACCCAACCTAATACAGAGATTTTGTAGGGACCCATTAACAAGCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000642952.1
CDS-3UTR CAA 90 bp GGGAGTCCCAATTGGAAATGGGGAGAAATGTGGAGTGTATGCATTTCTAAATACTTCCCAAATTTGTGTTaGAGCGGAAGTCCTGCATCC +
Preference number: 5 (lower is better)
Translates to: GSPNWKWGEMWSVCISKYFPNLC*SGSPAS
Trigger: GGATGCAGGACTTCCGCTCAAACACAAATTTGGGAA...GTATTTAGAAATGCATACACTCCACATTTCTCCCCATTTCCAATTGGGACTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675736.1
CDS-3UTR CAA 90 bp ATAGTTCCAAGCTGTCTTCTACCTATGGGGAAGATGAAAACCTTCACACACTTCTTCCCAAATTTGTGTTaGAGCGGAAGTCCTGCATCC +
Preference number: 5 (lower is better)
Translates to: IVPSCLLPMGKMKTFTHFFPNLC*SGSPAS
Trigger: GGATGCAGGACTTCCGCTCAAACACAAATTTGGGAA...GAAGTGTGTGAAGGTTTTCATCTTCCCCATAGGTAGAAGACAGCTTGGAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642952.1
ENST00000645933.1
CDS-3UTR CAA 90 bp GGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAATCTACCTTCCCAAATTaGTGTTTGAGCGGAAGTCCT +
Preference number: 5 (lower is better)
Translates to: GFNVFEGFTGYMDLHVYKSTFPN*CLSGSP
Trigger: AGGACTTCCGCTCAAACACAAATTTGGGAAGGTAGA...TTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000674563.1
ENST00000675736.1
CDS-3UTR CAA 90 bp AAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATCCATTGGGTTGCACATaGGGAGGAGAGCGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: KHRTYTKGIAIELVCFTYPLGCT*GGERFQ
Trigger: CTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATGG...ATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR CAA 90 bp TTATCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACCATTGGGTTGCACATaGGGAGGAGAGCGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: LSKVFMLLYKSGMGGCKLPLGCT*GGERFQ
Trigger: CTGGAAGCGCTCTCCTCCCAATGTGCAACCCAATGG...TAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp CTGAAAGAATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGATAGGCCAGATTCCATaGGGTTGCACATTGGGAGGA +
Preference number: 5 (lower is better)
Translates to: LKECSSFFIPTLNKPRVWIGQIP*GCTLGG
Trigger: TCCTCCCAATGTGCAACCCAATGGAATCTGGCCTAT...CCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTCTTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
CDS-3UTR CAA 90 bp ATCAGCTGTCCCACCAAGCAGCTACTCTTAGGGATGCTCAATTTTAGGAACTATAAACCTGTACAGAACTaGAACTCTTCAAAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: ISCPTKQLLLGMLNFRNYKPVQN*NSSKGG
Trigger: CCCACCCTTTGAAGAGTTCAAGTTCTGTACAGGTTT...ATAGTTCCTAAAATTGAGCATCCCTAAGAGTAGCTGCTTGGTGGGACAGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp CGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACATCAAAGTCTGATCACTaGAATATTAACTCAGACTCC +
Preference number: 5 (lower is better)
Translates to: RGFHRVHGPSCLQTQSSTSKSDH*NINSDS
Trigger: GGAGTCTGAGTTAATATTCAAGTGATCAGACTTTGA...TGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp TTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCATCTCACTTGAATGATTaGTCAACAAGTGCCATCAGA +
Preference number: 5 (lower is better)
Translates to: FEGFTGYMDLHVYKLSPASHLND*STSAIR
Trigger: TCTGATGGCACTTGTTGACAAATCATTCAAGTGAGA...TGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GCCTGGCCTTCAGATTCTAGAGAAGGCTTTTGTTTCCCCAAGTTAGGGTGGAACGTAACATGGTCTCACTaGAATGATTTGTCAACAAGT +
Preference number: 5 (lower is better)
Translates to: AWPSDSREGFCFPKLGWNVTWSH*NDLSTS
Trigger: ACTTGTTGACAAATCATTCAAGTGAGACCATGTTAC...GTTCCACCCTAACTTGGGGAAACAAAAGCCTTCTCTAGAATCTGAAGGCCAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GATCTAGCCCAGGTCTTAATGATAGTGGAAGACAAGGAGGAAAGAGGGAACGTTTTCTTGAGACTACTATaGTTCTCTGGTGTCAGAGGA +
Preference number: 5 (lower is better)
Translates to: DLAQVLMIVEDKEERGNVFLRLL*FSGVRG
Trigger: TCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAA...AACGTTCCCTCTTTCCTCCTTGTCTTCCACTATCATTAAGACCTGGGCTAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp CCTCTCATGAAAGACTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATATTCTTGAGACTACTATaGTTCTCTGGTGTCAGAGGA +
Preference number: 5 (lower is better)
Translates to: PLMKDYQVDRMSGQFADIFLRLL*FSGVRG
Trigger: TCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAA...TATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTCTTTCATGAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000642537.1
ENST00000645933.1
ENST00000675736.1
CDS-3UTR CAA 90 bp CTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGGGGGATTTTTCAGGTTTCCATTCTaGAGACTACTATTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: LPSGSHEWPVCRYSAGGFFRFPF*RLLLFS
Trigger: AGAGAACAATAGTAGTCTCAAGAATGGAAACCTGAA...AAATCCCCCTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000642537.1
ENST00000645933.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTAGGCACTTCAGGTTTCCATTCTaGAGACTACTATTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: ESESIPSSRGSLLSIFRHFRFPF*RLLLFS
Trigger: AGAGAACAATAGTAGTCTCAAGAATGGAAACCTGAA...GTGCCTAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000642537.1
ENST00000645933.1
ENST00000675736.1
CDS-3UTR CAA 90 bp CCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTAGGCATTTTGGGACAAGTTaGCTGACAATCTTAAATGTC +
Preference number: 5 (lower is better)
Translates to: PESESIPSSRGSLLSIFRHFGTS*LTILNV
Trigger: GACATTTAAGATTGTCAGCAAACTTGTCCCAAAATG...CCTAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GGGAGTCCCAATTGGAAATGGGGAGAAATGTGGAGTGTATGCATTTCTAAATACGAATGGGAGTCCCAATaGGAAATGGGGAGAAATGTG +
Preference number: 5 (lower is better)
Translates to: GSPNWKWGEMWSVCISKYEWESQ*EMGRNV
Trigger: CACATTTCTCCCCATTTCCAATTGGGACTCCCATTC...GTATTTAGAAATGCATACACTCCACATTTCTCCCCATTTCCAATTGGGACTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp CTGATGTCTCCAGATGTGAACTGTCTTATTGTCTGGAGAGAAGGCATTTTCCAGCAATTAAGAGGAATCTaGCCTCTCAGGATGTCTCTG +
Preference number: 5 (lower is better)
Translates to: LMSPDVNCLIVWREGIFQQLRGI*PLRMSL
Trigger: CAGAGACATCCTGAGAGGCAAGATTCCTCTTAATTG...CTGGAAAATGCCTTCTCTCCAGACAATAAGACAGTTCACATCTGGAGACATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp ATCAGCTGTCCCACCAAGCAGCTACTCTTAGGGATGCTCAATTTTAGGAACTATCAATTAAGAGGAATCTaGCCTCTCAGGATGTCTCTG +
Preference number: 5 (lower is better)
Translates to: ISCPTKQLLLGMLNFRNYQLRGI*PLRMSL
Trigger: CAGAGACATCCTGAGAGGCAAGATTCCTCTTAATTG...ATAGTTCCTAAAATTGAGCATCCCTAAGAGTAGCTGCTTGGTGGGACAGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GGAGACATTCATGGGTGCCTAACTACCAACAAGTTGTCAACTTCCCCAGGTAAGCTATCTATGTGCCATTaGAAGTACTGTAGTCGTGTA +
Preference number: 5 (lower is better)
Translates to: GDIHGCLTTNKLSTSPGKLSMCH*KYCSRV
Trigger: TACACGACTACAGTACTTCAAATGGCACATAGATAG...CTTACCTGGGGAAGTTGACAACTTGTTGGTAGTTAGGCACCCATGAATGTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp TCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACAGTGTAAACGGAAAGGCTAGAATATaGAAAAAGAAGTCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: SQGTWTFMSTNSVQHSVNGKARI*KKKSRG
Trigger: TCCCCTGGACTTCTTTTTCAATATTCTAGCCTTTCC...GTTTACACTGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp CTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTGCTGAAAGAATCTTCAACTTTTTGCTaGCGTACCGTGGAAGTAAAG +
Preference number: 5 (lower is better)
Translates to: LPKGHSFHSVIIKVLLKESSTFC*RTVEVK
Trigger: CTTTACTTCCACGGTACGCAAGCAAAAAGTTGAAGA...TTCTTTCAGCAGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
CDS-3UTR CAA 90 bp ACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTGCTGAAACACAATGAAGTTGAATaGAGGCAGAACTCATGGTCT +
Preference number: 5 (lower is better)
Translates to: TLPKGHSFHSVIIKVLLKHNEVE*RQNSWS
Trigger: AGACCATGAGTTCTGCCTCAATTCAACTTCATTGTG...TTTCAGCAGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642537.1
CDS-3UTR CAA 90 bp CGACCAAACTGTAACTTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAGTGGACACAGCTTTCTaGGCAGGGAACCCCAGAAAA +
Preference number: 5 (lower is better)
Translates to: RPNCNFRKGTNFLSMCSLVDTAF*AGNPRK
Trigger: TTTTCTGGGGTTCCCTGCCAAGAAAGCTGTGTCCAC...TAAAGAACACATTGACAGGAAATTTGTTCCCTTCCGAAAGTTACAGTTTGGTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CAA 90 bp GACCCTACTGGATCTTTTCTTTATGCCAGGTACAGTAGATACTGGGCCAACACAGTGGGTCTTGGGCACTaGACAGTTATATACTTCATT +
Preference number: 5 (lower is better)
Translates to: DPTGSFLYARYSRYWANTVGLGH*TVIYFI
Trigger: AATGAAGTATATAACTGTCAAGTGCCCAAGACCCAC...TGTGTTGGCCCAGTATCTACTGTACCTGGCATAAAGAAAAGATCCAGTAGGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CAA 90 bp GCCTTTCAAAATCATCTTTATATCCCCAGGGCCAGAAGCCTGCGGAACACAATAAAGAAAGGCGGCTGCTaGATGAGGTCTATTAGATTA +
Preference number: 5 (lower is better)
Translates to: AFQNHLYIPRARSLRNTIKKGGC*MRSIRL
Trigger: TAATCTAATAGACCTCATCAAGCAGCCGCCTTTCTT...TATTGTGTTCCGCAGGCTTCTGGCCCTGGGGATATAAAGATGATTTTGAAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CAA 90 bp TTACACTTGCCACATTTCAAATATTCAGTAGTCATGTGGCTAGTGGCTACAGATAGACGGTTGCCCAGTTaGGGCTCCAAAGCAAACTCT +
Preference number: 5 (lower is better)
Translates to: LHLPHFKYSVVMWLVATDRRLPS*GSKANS
Trigger: AGAGTTTGCTTTGGAGCCCAAACTGGGCAACCGTCT...ATCTGTAGCCACTAGCCACATGACTACTGAATATTTGAAATGTGGCAAGTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS GCA 90 bp ACGCAGGTTAAAAATATCATCACCCAGATCCAAGAAATCAAGTCCTaGGTATTGTTCTTTCGGCATTTCCCCGGTTCCTTTCTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: TQVKNIITQIQEIKS*VLFFRHFPGSFLLP
Trigger: AGGAAGAAGAAAGGAACCGGGGAAATGCCGAAAGAACAATACGCAGGACTTGATTTCTTGGATCTGGGTGATGATATTTTTAACCTGCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS-3UTR CAA 90 bp TCTCATGAAAGACTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGTGCTGCTCACTTGGTaGTCTTTTGAAAGTATCTCA +
Preference number: 5 (lower is better)
Translates to: SHERLPSGSHEWPVCRYSVLLTW*SFESIS
Trigger: TGAGATACTTTCAAAAGACAACCAAGTGAGCAGCAC...ACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTCTTTCATGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000602661.6
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
CDS-3UTR CAA 90 bp AAAACTGACCCTACTGGATCTTTTCTTTATGCCAGGTACAGTAGATACTGGGCCGTGCTGCTCACTTGGTaGTCTTTTGAAAGTATCTCA +
Preference number: 5 (lower is better)
Translates to: KTDPTGSFLYARYSRYWAVLLTW*SFESIS
Trigger: TGAGATACTTTCAAAAGACAACCAAGTGAGCAGCAC...GGCCCAGTATCTACTGTACCTGGCATAAAGAAAAGATCCAGTAGGGTCAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CAA 90 bp TGTAGGGAAGAATATAGAACCTGTGTCAATTGGGCCAAGATGTCTTGGATTTCAGCAGAAATGCAGAACTaGTCAGCGTTAAAAGGGCCA +
Preference number: 5 (lower is better)
Translates to: CREEYRTCVNWAKMSWISAEMQN*SALKGP
Trigger: TGGCCCTTTTAACGCTGACAAGTTCTGCATTTCTGC...TGAAATCCAAGACATCTTGGCCCAATTGACACAGGTTCTATATTCTTCCCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp ATCTTAAAAGTAGCACTAACATACCAGCTTAAATGCCCAGAAGAGGAGTGGGTTGCAGAAATGCAGAACTaGTCAGCGTTAAAAGGGCCA +
Preference number: 5 (lower is better)
Translates to: ILKVALTYQLKCPEEEWVAEMQN*SALKGP
Trigger: TGGCCCTTTTAACGCTGACAAGTTCTGCATTTCTGC...AACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGTTAGTGCTACTTTTAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp ATTTGTGGGTCTTGGGCACTTGACAGTTATATACTTCATTTTCGTATCCCTCGTGCAGAAATGCAGAACTaGTCAGCGTTAAAAGGGCCA +
Preference number: 5 (lower is better)
Translates to: ICGSWALDSYILHFRIPRAEMQN*SALKGP
Trigger: TGGCCCTTTTAACGCTGACAAGTTCTGCATTTCTGC...ACGAGGGATACGAAAATGAAGTATATAACTGTCAAGTGCCCAAGACCCACAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CAA 90 bp GTTCCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTCAGCTCCATTCTTTGTaGATAAATAGTGCTTGTAGT +
Preference number: 5 (lower is better)
Translates to: VPESESIPSSRGSLLSIFQLHSL*INSACS
Trigger: ACTACAAGCACTATTTATCAACAAAGAATGGAGCTG...AAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CAA 90 bp TTGCACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTGCTAACCAGCTCCATTCTTaGTTGATAAATAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: LHSSERPQLPQCYHQGTANQLHS*LINSAC
Trigger: ACAAGCACTATTTATCAACAAAGAATGGAGCTGGTT...AGCAGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR CAA 90 bp GCACTAACATACCAGCTTAAATGCCCAGAAGAGGAGTGGGTTATTCTTTTCAACCCAATTCGGCTTCCTTaGGATTTTGACAAACCAGCT +
Preference number: 5 (lower is better)
Translates to: ALTYQLKCPEEEWVILFNPIRLP*DFDKPA
Trigger: AGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTGG...GTTGAAAAGAATAACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGTTAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp CCTCAGACATTCAGGTTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGACCAATTCGGCTTCCTTaGGATTTTGACAAACCAGCT +
Preference number: 5 (lower is better)
Translates to: PQTFRFPFLRLLLFSGVRPIRLP*DFDKPA
Trigger: AGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTGG...TCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAACCTGAATGTCTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp TTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGCCAATTCGGCTTCCTTaGGATTTTGACAAACCAGCT +
Preference number: 5 (lower is better)
Translates to: FRKGTNFLSMCSLSLKWPPIRLP*DFDKPA
Trigger: AGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTGG...CGGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCCCTTCCGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CAA 90 bp CTTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCCCAATTCGGCTTCCTTaGGATTTTGACAAACCAGCT +
Preference number: 5 (lower is better)
Translates to: LSEGNKFPVNVFFKSQVAPIRLP*DFDKPA
Trigger: AGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTGG...GGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCCCTTCCGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CAA 90 bp TGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAGGAACACAGAAAAACTaGCATTGTGAAGTAGAGCCA +
Preference number: 5 (lower is better)
Translates to: WLQCIRGFHRVHGPSCLQGTQKN*HCEVEP
Trigger: TGGCTCTACTTCACAATGCAAGTTTTTCTGTGTTCC...TTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp TGGGGGAATCTTCCAAAGAAACTACTCTACTCAGCCATCTCCTGTTCTTTTCTCGGAACACAGAAAAACTaGCATTGTGAAGTAGAGCCA +
Preference number: 5 (lower is better)
Translates to: WGNLPKKLLYSAISCSFLGTQKN*HCEVEP
Trigger: TGGCTCTACTTCACAATGCAAGTTTTTCTGTGTTCC...GAGAAAAGAACAGGAGATGGCTGAGTAGAGTAGTTTCTTTGGAAGATTCCCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR CAA 90 bp TACCATAGTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCAGGAACACAGAAAAACTaGCATTGTGAAGTAGAGCCA +
Preference number: 5 (lower is better)
Translates to: YHSWLQCIRGFHRVHGPSGTQKN*HCEVEP
Trigger: TGGCTCTACTTCACAATGCAAGTTTTTCTGTGTTCC...TGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCAACTATGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GCCTCCTTTAAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTGTTGCAGTAATTCCTTaGCACTCTTCCGAAAGGCCA +
Preference number: 5 (lower is better)
Translates to: ASFKHRTYTKGIAIELVCVAVIP*HSSERP
Trigger: TGGCCTTTCGGAAGAGTGCAAAGGAATTACTGCAAC...ACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTTAAAGGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
CDS-3UTR CAA 90 bp TTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGGTTGCAGTAATTCCTTaGCACTCTTCCGAAAGGCCA +
Preference number: 5 (lower is better)
Translates to: FPFLRLLLFSGVRGKSAKVAVIP*HSSERP
Trigger: TGGCCTTTCGGAAGAGTGCAAAGGAATTACTGCAAC...CTTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GCCTCCTTTAAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCCCAAATTTGTGTTaGAGCGGAAGTCCTGCATCC +
Preference number: 5 (lower is better)
Translates to: ASFKHRTYTKGIAIELVCFPNLC*SGSPAS
Trigger: GGATGCAGGACTTCCGCTCAAACACAAATTTGGGAA...ACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTTAAAGGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
CDS-3UTR CAA 90 bp CCAGAAACCACTCATGTTATTTATGAAAGACCCAATAATTCTGCATTGAGAATGCCAGATTCCATTGGGTaGCACATTGGGAGGAGAGCG +
Preference number: 5 (lower is better)
Translates to: PETTHVIYERPNNSALRMPDSIG*HIGRRA
Trigger: CGCTCTCCTCCCAATGTGCAACCCAATGGAATCTGG...CATTCTCAATGCAGAATTATTGGGTCTTTCATAAATAACATGAGTGGTTTCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp CCACGTCTTTACAGGAATCTTCCAGGTCTTACCATAGTTGGCTTCAATGTATTCAAACCTGTACAGAACTaGAACTCTTCAAAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: PRLYRNLPGLTIVGFNVFKPVQN*NSSKGG
Trigger: CCCACCCTTTGAAGAGTTCAAGTTCTGTACAGGTTT...GAATACATTGAAGCCAACTATGGTAAGACCTGGAAGATTCCTGTAAAGACGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp TTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGTATCCTTCCTTAGCTTaGCCTGGTGAGCTCATCTTC +
Preference number: 5 (lower is better)
Translates to: FPFLRLLLFSGVRGKSAKYPSLA*PGELIF
Trigger: GAAGATGAGCTCACCAGGCAAAGCTAAGGAAGGATA...CTTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp AAAGTAGCACTAACATACCAGCTTAAATGCCCAGAAGAGGAGTGGGTTATTCTTTATCCTTCCTTAGCTTaGCCTGGTGAGCTCATCTTC +
Preference number: 5 (lower is better)
Translates to: KVALTYQLKCPEEEWVILYPSLA*PGELIF
Trigger: GAAGATGAGCTCACCAGGCAAAGCTAAGGAAGGATA...AAGAATAACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGTTAGTGCTACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GTTTTCGCTGCTAGTTGCAGTAATTCCTTTGCACTCTTCCGAAAGGCCACAGCTTCAAAGTCTGATCACTaGAATATTAACTCAGACTCC +
Preference number: 5 (lower is better)
Translates to: VFAASCSNSFALFRKATASKSDH*NINSDS
Trigger: GGAGTCTGAGTTAATATTCAAGTGATCAGACTTTGA...AGCTGTGGCCTTTCGGAAGAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
CDS-3UTR CAA 90 bp TGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAATTCTTGAGACTACTATaGTTCTCTGGTGTCAGAGGA +
Preference number: 5 (lower is better)
Translates to: WLQCIRGFHRVHGPSCLQFLRLL*FSGVRG
Trigger: TCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAA...TTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp CCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGCTCTTCTTGAGACTACTATaGTTCTCTGGTGTCAGAGGA +
Preference number: 5 (lower is better)
Translates to: PFLRLLLFSGVRGKSAKLFLRLL*FSGVRG
Trigger: TCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAA...GAGCTTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GGGTTAGAAGGTGCCAGGGGGTATTCTAGGGTAGAAGTTTTGATAGTACGGAAGTCAAAGGTTTTCATGTaGCTTTACAAATCCGGAATG +
Preference number: 5 (lower is better)
Translates to: GLEGARGYSRVEVLIVRKSKVFM*LYKSGM
Trigger: CATTCCGGATTTGTAAAGCAACATGAAAACCTTTGA...CTTCCGTACTATCAAAACTTCTACCCTAGAATACCCCCTGGCACCTTCTAACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR CAA 90 bp ATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCTCAAAGGTTTTCATGTaGCTTTACAAATCCGGAATG +
Preference number: 5 (lower is better)
Translates to: IRGFHRVHGPSCLQTQSSSKVFM*LYKSGM
Trigger: CATTCCGGATTTGTAAAGCAACATGAAAACCTTTGA...GCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GTTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGAATGGGAGTCCCAATaGGAAATGGGGAGAAATGTG +
Preference number: 5 (lower is better)
Translates to: VSILETTIVLWCQRKICQEWESQ*EMGRNV
Trigger: CACATTTCTCCCCATTTCCAATTGGGACTCCCATTC...TTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp TGTCCCACCAAGCAGCTACTCTTAGGGATGCTCAATTTTAGGAACTATGGTTTTCTAACTACCAACAAGTaGTCAACTTCCCCAGGTAAG +
Preference number: 5 (lower is better)
Translates to: CPTKQLLLGMLNFRNYGFLTTNK*STSPGK
Trigger: CTTACCTGGGGAAGTTGACAACTTGTTGGTAGTTAG...AAAACCATAGTTCCTAAAATTGAGCATCCCTAAGAGTAGCTGCTTGGTGGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GGGAGTCCCAATTGGAAATGGGGAGAAATGTGGAGTGTATGCATTTCTAAATACCAATTAAGAGGAATCTaGCCTCTCAGGATGTCTCTG +
Preference number: 5 (lower is better)
Translates to: GSPNWKWGEMWSVCISKYQLRGI*PLRMSL
Trigger: CAGAGACATCCTGAGAGGCAAGATTCCTCTTAATTG...GTATTTAGAAATGCATACACTCCACATTTCTCCCCATTTCCAATTGGGACTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp ACTTCCCCAGGTAAGCCAGGTAAACTAAACCTGAAAGTGGTCAGATTAGGAGAAGGTCAATTTCAGGTTTaGCAGCTAGGGAATCAAAGA +
Preference number: 5 (lower is better)
Translates to: TSPGKPGKLNLKVVRLGEGQFQV*QLGNQR
Trigger: TCTTTGATTCCCTAGCTGCAAAACCTGAAATTGACC...TTCTCCTAATCTGACCACTTTCAGGTTTAGTTTACCTGGCTTACCTGGGGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp TTCCAGAGAGTGAGTCTATCCCGTCTAGCCGGGGATCTTTACTCTCAATCTTTACTATCTATGTGCCATTaGAAGTACTGTAGTCGTGTA +
Preference number: 5 (lower is better)
Translates to: FQRVSLSRLAGDLYSQSLLSMCH*KYCSRV
Trigger: TACACGACTACAGTACTTCAAATGGCACATAGATAG...TAAAGATTGAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR CAA 90 bp CGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGTGCTTGCTGGGATTTTTCTaGAGAAATTCTCTTGACTGG +
Preference number: 5 (lower is better)
Translates to: RKGTNFLSMCSLSLKWPCLLGFF*RNSLDW
Trigger: CCAGTCAAGAGAATTTCTCAAGAAAAATCCCAGCAA...GCACGGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCCCTTCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR CAA 90 bp ATCAGCTGTCCCACCAAGCAGCTACTCTTAGGGATGCTCAATTTTAGGAACTATGGAAAGGCTAGAATATaGAAAAAGAAGTCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: ISCPTKQLLLGMLNFRNYGKARI*KKKSRG
Trigger: TCCCCTGGACTTCTTTTTCAATATTCTAGCCTTTCC...ATAGTTCCTAAAATTGAGCATCCCTAAGAGTAGCTGCTTGGTGGGACAGCTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp CCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGCTCTCTAGGGTAGAAGTTTaGATAGTACGGAAGCAGAGA +
Preference number: 5 (lower is better)
Translates to: PFLRLLLFSGVRGKSAKLSRVEV*IVRKQR
Trigger: TCTCTGCTTCCGTACTATCAAAACTTCTACCCTAGA...GAGCTTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR CAA 90 bp GCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCTAGGGTAGAAGTTTaGATAGTACGGAAGCAGAGA +
Preference number: 5 (lower is better)
Translates to: ASMYSRVSQGTWTFMSTNSRVEV*IVRKQR
Trigger: TCTCTGCTTCCGTACTATCAAAACTTCTACCCTAGA...GTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000642952.1
ENST00000644273.1
ENST00000675695.1
CDS-3UTR CAA 90 bp ATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCACAATGAAGTTGAATaGAGGCAGAACTCATGGTCT +
Preference number: 5 (lower is better)
Translates to: MYSRVSQGTWTFMSTNSVHNEVE*RQNSWS
Trigger: AGACCATGAGTTCTGCCTCAATTCAACTTCATTGTG...GACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642177.1
ENST00000642537.1
ENST00000644273.1
CDS-3UTR CAA 90 bp ACCCTACTGGATCTTTTCTTTATGCCAGGTACAGTAGATACTGGGCCAACACAGAACCCCACTGTAAATTaGCCTGTTTTCACTGTATCT +
Preference number: 5 (lower is better)
Translates to: TLLDLFFMPGTVDTGPTQNPTVN*PVFTVS
Trigger: AGATACAGTGAAAACAGGCAAATTTACAGTGGGGTT...CTGTGTTGGCCCAGTATCTACTGTACCTGGCATAAAGAAAAGATCCAGTAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CAA 90 bp TCTCATGAAAGACTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTAAGAAAGGCGGCTGCTaGATGAGGTCTATTAGATTA +
Preference number: 5 (lower is better)
Translates to: SHERLPSGSHEWPVCRYSKKGGC*MRSIRL
Trigger: TAATCTAATAGACCTCATCAAGCAGCCGCCTTTCTT...ACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTCTTTCATGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CAA 90 bp CCTCAGACATTCAGGTTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGTGCTGCTCACTTGGTaGTCTTTTGAAAGTATCTCA +
Preference number: 5 (lower is better)
Translates to: PQTFRFPFLRLLLFSGVRVLLTW*SFESIS
Trigger: TGAGATACTTTCAAAAGACAACCAAGTGAGCAGCAC...TCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAACCTGAATGTCTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp TACAGTACTGACAGTAGCTACTACTTACACAATACTTACAATGTGCCAGGTACTGCAGAAATGCAGAACTaGTCAGCGTTAAAAGGGCCA +
Preference number: 5 (lower is better)
Translates to: YSTDSSYYLHNTYNVPGTAEMQN*SALKGP
Trigger: TGGCCCTTTTAACGCTGACAAGTTCTGCATTTCTGC...AGTACCTGGCACATTGTAAGTATTGTGTAAGTAGTAGCTACTGTCAGTACTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR CAA 90 bp CCTCTCATGAAAGACTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAAACCAGCTCCATTCTTaGTTGATAAATAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: PLMKDYQVDRMSGQFADINQLHS*LINSAC
Trigger: ACAAGCACTATTTATCAACAAAGAATGGAGCTGGTT...TATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTCTTTCATGAGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CAA 90 bp CTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTACTGCTGAAAGAAAACCAGCTCCATTCTTaGTTGATAAATAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: LPKGHSFHSVIIKVLLKENQLHS*LINSAC
Trigger: ACAAGCACTATTTATCAACAAAGAATGGAGCTGGTT...TTCTTTCAGCAGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR CAA 90 bp AGTAACATGATAGAAAATCTGGGACTCACACCATCTGTCCAGACAGTTCTATCACCAATTCGGCTTCCTTaGGATTTTGACAAACCAGCT +
Preference number: 5 (lower is better)
Translates to: SNMIENLGLTPSVQTVLSPIRLP*DFDKPA
Trigger: AGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTGG...TGATAGAACTGTCTGGACAGATGGTGTGAGTCCCAGATTTTCTATCATGTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR CAA 90 bp GAATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCCCAATTCGGCTTCCTTaGGATTTTGACAAACCAGCT +
Preference number: 5 (lower is better)
Translates to: ECSSFFIPTLNKPRVWYFPIRLP*DFDKPA
Trigger: AGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTGG...GAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CAA 90 bp CTGGATCTTTTCTTTATGCCAGGTACAGTAGATACTGGGCCAACACAGGTAAATGGAACACAGAAAAACTaGCATTGTGAAGTAGAGCCA +
Preference number: 5 (lower is better)
Translates to: LDLFFMPGTVDTGPTQVNGTQKN*HCEVEP
Trigger: TGGCTCTACTTCACAATGCAAGTTTTTCTGTGTTCC...ATTTACCTGTGTTGGCCCAGTATCTACTGTACCTGGCATAAAGAAAAGATCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CAA 90 bp GTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACAGTTGCAGTAATTCCTTaGCACTCTTCCGAAAGGCCA +
Preference number: 5 (lower is better)
Translates to: VTFSNLFSKKSTSPFPQTVAVIP*HSSERP
Trigger: TGGCCTTTCGGAAGAGTGCAAAGGAATTACTGCAAC...TGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675736.1
CDS-3UTR CAA 90 bp AATGCAGTAAAGTCTCTTGGAACACAGAAAAACTTGCATTGTGAAGTAGAGCCAGTTGCAGTAATTCCTTaGCACTCTTCCGAAAGGCCA +
Preference number: 5 (lower is better)
Translates to: NAVKSLGTQKNLHCEVEPVAVIP*HSSERP
Trigger: TGGCCTTTCGGAAGAGTGCAAAGGAATTACTGCAAC...TGGCTCTACTTCACAATGCAAGTTTTTCTGTGTTCCAAGAGACTTTACTGCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000602526.1
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000676371.1
CDS-3UTR CAA 90 bp GCCAGAATGGTACTCCCAATTTGTTTAATGTTTTCGCTGCTAGTTGCAGTAATTGTTGCAGTAATTCCTTaGCACTCTTCCGAAAGGCCA +
Preference number: 5 (lower is better)
Translates to: ARMVLPICLMFSLLVAVIVAVIP*HSSERP
Trigger: TGGCCTTTCGGAAGAGTGCAAAGGAATTACTGCAAC...AATTACTGCAACTAGCAGCGAAAACATTAAACAAATTGGGAGTACCATTCTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR CAA 90 bp ATGAAAGACTACCAAGTGGATCGCATGAGTGGCCAGTTTGCAGATATAGTGCAGAATGGTACTCCCAATTaGTTTAATGTTTTCGCTGCT +
Preference number: 5 (lower is better)
Translates to: MKDYQVDRMSGQFADIVQNGTPN*FNVFAA
Trigger: AGCAGCGAAAACATTAAACAAATTGGGAGTACCATT...CTGCACTATATCTGCAAACTGGCCACTCATGCGATCCACTTGGTAGTCTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR CAA 90 bp GGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGTGCCAGAGAATGGTACTCCCAATTaGTTTAATGTTTTCGCTGCT +
Preference number: 5 (lower is better)
Translates to: GNKFPVNVFFKSQVAVPENGTPN*FNVFAA
Trigger: AGCAGCGAAAACATTAAACAAATTGGGAGTACCATT...CTCTGGCACGGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR CAA 90 bp AATGCAGTAAAGTCTCTTGGAACACAGAAAAACTTGCATTGTGAAGTAGAGCCATTCCCAAATTTGTGTTaGAGCGGAAGTCCTGCATCC +
Preference number: 5 (lower is better)
Translates to: NAVKSLGTQKNLHCEVEPFPNLC*SGSPAS
Trigger: GGATGCAGGACTTCCGCTCAAACACAAATTTGGGAA...TGGCTCTACTTCACAATGCAAGTTTTTCTGTGTTCCAAGAGACTTTACTGCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000602526.1
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000676371.1
CDS-3UTR CAA 90 bp AAGGAGAGCTTTTCCCTTGTTTATGAGGTCACATGCCAGAAATTTGCTTTTTCTTTCCCAAATTTGTGTTaGAGCGGAAGTCCTGCATCC +
Preference number: 5 (lower is better)
Translates to: KESFSLVYEVTCQKFAFSFPNLC*SGSPAS
Trigger: GGATGCAGGACTTCCGCTCAAACACAAATTTGGGAA...AGAAAAAGCAAATTTCTGGCATGTGACCTCATAAACAAGGGAAAAGCTCTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR CAA 90 bp TACAGTACTGACAGTAGCTACTACTTACACAATACTTACAATGTGCCAGGTACTTTCCCAAATTTGTGTTaGAGCGGAAGTCCTGCATCC +
Preference number: 5 (lower is better)
Translates to: YSTDSSYYLHNTYNVPGTFPNLC*SGSPAS
Trigger: GGATGCAGGACTTCCGCTCAAACACAAATTTGGGAA...AGTACCTGGCACATTGTAAGTATTGTGTAAGTAGTAGCTACTGTCAGTACTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR CAA 90 bp ATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCTACAAAGTGCATTGGTTCCCAAATTTGTGTTaGAGCGGAAGTCCTGCATCC +
Preference number: 5 (lower is better)
Translates to: IPTLNKPRVWYFFYKVHWFPNLC*SGSPAS
Trigger: GGATGCAGGACTTCCGCTCAAACACAAATTTGGGAA...CCAATGCACTTTGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR CAA 90 bp AGGAGAGCTTTTCCCTTGTTTATGAGGTCACATGCCAGAAATTTGCTTTTTCTGTCTACCTTCCCAAATTaGTGTTTGAGCGGAAGTCCT +
Preference number: 5 (lower is better)
Translates to: RRAFPLFMRSHARNLLFLSTFPN*CLSGSP
Trigger: AGGACTTCCGCTCAAACACAAATTTGGGAAGGTAGA...CAGAAAAAGCAAATTTCTGGCATGTGACCTCATAAACAAGGGAAAAGCTCTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR CAA 90 bp AGCAAACTAGGTAGCATATGGGATAATATTAGGAGACAACTGCTTAACCAAGAAATAGGCCAGATTCCATaGGGTTGCACATTGGGAGGA +
Preference number: 5 (lower is better)
Translates to: SKLGSIWDNIRRQLLNQEIGQIP*GCTLGG
Trigger: TCCTCCCAATGTGCAACCCAATGGAATCTGGCCTAT...TTCTTGGTTAAGCAGTTGTCTCCTAATATTATCCCATATGCTACCTAGTTTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GACTCCACAATCTTAAAAGTAGCACTAACATACCAGCTTAAATGCCCAGAAGAGAAACCTGTACAGAACTaGAACTCTTCAAAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: DSTILKVALTYQLKCPEEKPVQN*NSSKGG
Trigger: CCCACCCTTTGAAGAGTTCAAGTTCTGTACAGGTTT...CTCTTCTGGGCATTTAAGCTGGTATGTTAGTGCTACTTTTAAGATTGTGGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp CAGGTACCAAATCTAGTGAAGTACAGTAAACTGCTTGGGACCAGCAAACTAGGTTCTCACTTGAATGATTaGTCAACAAGTGCCATCAGA +
Preference number: 5 (lower is better)
Translates to: QVPNLVKYSKLLGTSKLGSHLND*STSAIR
Trigger: TCTGATGGCACTTGTTGACAAATCATTCAAGTGAGA...ACCTAGTTTGCTGGTCCCAAGCAGTTTACTGTACTTCACTAGATTTGGTACCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp CCACGTCTTTACAGGAATCTTCCAGGTCTTACCATAGTTGGCTTCAATGTATTCTTCTTGAGACTACTATaGTTCTCTGGTGTCAGAGGA +
Preference number: 5 (lower is better)
Translates to: PRLYRNLPGLTIVGFNVFFLRLL*FSGVRG
Trigger: TCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAA...GAATACATTGAAGCCAACTATGGTAAGACCTGGAAGATTCCTGTAAAGACGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GACCTCTCTGTCGCCTTAGGTTCTCAATCTGAACAAAAAGATACTAAGCGGCAGCATTTTGGGACAAGTTaGCTGACAATCTTAAATGTC +
Preference number: 5 (lower is better)
Translates to: DLSVALGSQSEQKDTKRQHFGTS*LTILNV
Trigger: GACATTTAAGATTGTCAGCAAACTTGTCCCAAAATG...CTGCCGCTTAGTATCTTTTTGTTCAGATTGAGAACCTAAGGCGACAGAGAGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp TTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGCTAACTACCAACAAGTaGTCAACTTCCCCAGGTAAG +
Preference number: 5 (lower is better)
Translates to: FPFLRLLLFSGVRGKSAKLTTNK*STSPGK
Trigger: CTTACCTGGGGAAGTTGACAACTTGTTGGTAGTTAG...CTTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp TGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCCTAACTACCAACAAGTaGTCAACTTCCCCAGGTAAG +
Preference number: 5 (lower is better)
Translates to: CSSFFIPTLNKPRVWYFFLTTNK*STSPGK
Trigger: CTTACCTGGGGAAGTTGACAACTTGTTGGTAGTTAG...GAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GACTCCACAATCTTAAAAGTAGCACTAACATACCAGCTTAAATGCCCAGAAGAGTGGGTGACTACCTGGTaGTCCTGGTTATCAATTAAG +
Preference number: 5 (lower is better)
Translates to: DSTILKVALTYQLKCPEEWVTTW*SWLSIK
Trigger: CTTAATTGATAACCAGGACAACCAGGTAGTCACCCA...CTCTTCTGGGCATTTAAGCTGGTATGTTAGTGCTACTTTTAAGATTGTGGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp AAAGTAGCACTAACATACCAGCTTAAATGCCCAGAAGAGGAGTGGGTTATTCTTTGGGTGACTACCTGGTaGTCCTGGTTATCAATTAAG +
Preference number: 5 (lower is better)
Translates to: KVALTYQLKCPEEEWVILWVTTW*SWLSIK
Trigger: CTTAATTGATAACCAGGACAACCAGGTAGTCACCCA...AAGAATAACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGTTAGTGCTACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAACCTATCTATGTGCCATTaGAAGTACTGTAGTCGTGTA +
Preference number: 5 (lower is better)
Translates to: ASMYSRVSQGTWTFMSTNLSMCH*KYCSRV
Trigger: TACACGACTACAGTACTTCAAATGGCACATAGATAG...GTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp ATTCCTTTGCACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTATAATTGTTGGTAACTaGCTACTAATGACTGACCTG +
Preference number: 5 (lower is better)
Translates to: IPLHSSERPQLPQCYHQGIIVGN*LLMTDL
Trigger: CAGGTCAGTCATTAGTAGCAAGTTACCAACAATTAT...ACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTGCAAAGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
CDS-3UTR CAA 90 bp TCACAGGGTACATGGACCTTCATGTCTACAAACTCAGTCCAGCACAGTGTAAACATAATTGTTGGTAACTaGCTACTAATGACTGACCTG +
Preference number: 5 (lower is better)
Translates to: SQGTWTFMSTNSVQHSVNIIVGN*LLMTDL
Trigger: CAGGTCAGTCATTAGTAGCAAGTTACCAACAATTAT...GTTTACACTGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642177.1
ENST00000642537.1
ENST00000642952.1
ENST00000644273.1
ENST00000645933.1
CDS-3UTR CAA 90 bp TTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTCCATTCCACAATGAAGTTGAATaGAGGCAGAACTCATGGTCT +
Preference number: 5 (lower is better)
Translates to: LFSKKSTSPFPQTFRFPFHNEVE*RQNSWS
Trigger: AGACCATGAGTTCTGCCTCAATTCAACTTCATTGTG...GAATGGAAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642177.1
ENST00000642537.1
CDS-3UTR CAA 90 bp TTCATGAAGTCTTTTCTAAATCTACATGGTCCATCTTCTATAGTGGCTTTATCCGTGGACACAGCTTTCTaGGCAGGGAACCCCAGAAAA +
Preference number: 5 (lower is better)
Translates to: FMKSFLNLHGPSSIVALSVDTAF*AGNPRK
Trigger: TTTTCTGGGGTTCCCTGCCAAGAAAGCTGTGTCCAC...GGATAAAGCCACTATAGAAGATGGACCATGTAGATTTAGAAAAGACTTCATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CAA 90 bp CCATGTACTGAGCAGTGTGCCAGACACTGCAGATTTCTTACAATTTCTTACAATCTACAGATACATCATTaGCAGCATCACACCATGCTC +
Preference number: 5 (lower is better)
Translates to: PCTEQCARHCRFLTISYNLQIHH*QHHTML
Trigger: GAGCATGGTGTGATGCTGCAAATGATGTATCTGTAG...ATTGTAAGAAATTGTAAGAAATCTGCAGTGTCTGGCACACTGCTCAGTACATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR CAA 90 bp ATTCCTTTGCACTCTTCCGAAAGGCCACAGCTTCCACAGTGTTATCATCAAGGTTCATTTGTTCACAGCTaGATTTTTACCGACTGGAAA +
Preference number: 5 (lower is better)
Translates to: IPLHSSERPQLPQCYHQGSFVHS*IFTDWK
Trigger: TTTCCAGTCGGTAAAAATCAAGCTGTGAACAAATGA...ACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTGCAAAGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS-3UTR CAA 90 bp TGTGGTAAGCTGCTCTTCAACTTTTTGCTTGCGTACCGTGGAAGTAAAGACTTTGAAAGATCACCCCTGTaGCCTTTGGCTGTTAAAATA +
Preference number: 5 (lower is better)
Translates to: CGKLLFNFLLAYRGSKDFERSPL*PLAVKI
Trigger: TATTTTAACAGCCAAAGGCAACAGGGGTGATCTTTC...AAAGTCTTTACTTCCACGGTACGCAAGCAAAAAGTTGAAGAGCAGCTTACCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674767.1
CDS CCA 90 bp TGTTATTGTTGGTTTTATACTTTCAGAAGCAGGGGAAACAATCTTTaGCGCATCATTTCACTAGCAGTGATCCTTCAGAGTGATGGGTCT +
Preference number: 5 (lower is better)
Translates to: CYCWFYTFRSRGNNL*RIISLAVILQSDGS
Trigger: AGACCCATCACTCTGAAGGATCACTGCTAGTGAAATGATGCGCCAAAGATTGTTTCCCCTGCTTCTGAAAGTATAAAACCAACAATAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR CAA 90 bp AGCAAACTAGGTAGCATATGGGATAATATTAGGAGACAACTGCTTAACCAAGAAGCAGAAATGCAGAACTaGTCAGCGTTAAAAGGGCCA +
Preference number: 5 (lower is better)
Translates to: SKLGSIWDNIRRQLLNQEAEMQN*SALKGP
Trigger: TGGCCCTTTTAACGCTGACAAGTTCTGCATTTCTGC...TTCTTGGTTAAGCAGTTGTCTCCTAATATTATCCCATATGCTACCTAGTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp AAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTCTGCAGAAATGCAGAACTaGTCAGCGTTAAAAGGGCCA +
Preference number: 5 (lower is better)
Translates to: KVFMLLYKSGMGGCKLLSAEMQN*SALKGP
Trigger: TGGCCCTTTTAACGCTGACAAGTTCTGCATTTCTGC...AGAAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp TGTACTTTCTCTGACTGCTCTCTCTATTTACTAAAAGGTTTGGGAATGTTGTCAGCAGAAATGCAGAACTaGTCAGCGTTAAAAGGGCCA +
Preference number: 5 (lower is better)
Translates to: CTFSDCSLYLLKGLGMLSAEMQN*SALKGP
Trigger: TGGCCCTTTTAACGCTGACAAGTTCTGCATTTCTGC...TGACAACATTCCCAAACCTTTTAGTAAATAGAGAGAGCAGTCAGAGAAAGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674767.1
CDS-3UTR CAA 90 bp AACTGTAACTTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCGCAGAAATGCAGAACTaGTCAGCGTTAAAAGGGCCA +
Preference number: 5 (lower is better)
Translates to: NCNFRKGTNFLSMCSLSLAEMQN*SALKGP
Trigger: TGGCCCTTTTAACGCTGACAAGTTCTGCATTTCTGC...GAGACTTAAAGAACACATTGACAGGAAATTTGTTCCCTTCCGAAAGTTACAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CAA 90 bp CCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGAGGAAAATCTGCCAAGCTCCAGCTCCATTCTTTGTaGATAAATAGTGCTTGTAGT +
Preference number: 5 (lower is better)
Translates to: PFLRLLLFSGVRGKSAKLQLHSL*INSACS
Trigger: ACTACAAGCACTATTTATCAACAAAGAATGGAGCTG...GAGCTTGGCAGATTTTCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp ATCCCATATTCTCAGCTATCCGAAACCAGCCTTCCTCATTCTTCCATAGGTGATCAGCTCCATTCTTTGTaGATAAATAGTGCTTGTAGT +
Preference number: 5 (lower is better)
Translates to: IPYSQLSETSLPHSSIGDQLHSL*INSACS
Trigger: ACTACAAGCACTATTTATCAACAAAGAATGGAGCTG...ATCACCTATGGAAGAATGAGGAAGGCTGGTTTCGGATAGCTGAGAATATGGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CAA 90 bp GGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAAAACCAGCTCCATTCTTaGTTGATAAATAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: GFNVFEGFTGYMDLHVYKNQLHS*LINSAC
Trigger: ACAAGCACTATTTATCAACAAAGAATGGAGCTGGTT...TTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp CGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCTACACCAATTCGGCTTCCTTaGGATTTTGACAAACCAGCT +
Preference number: 5 (lower is better)
Translates to: RASLYLHSINLECGTSSTPIRLP*DFDKPA
Trigger: AGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTGG...TGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CAA 90 bp AAGGTACTGCTGAAAGAATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTCCAATTCGGCTTCCTTaGGATTTTGACAAACCAGCT +
Preference number: 5 (lower is better)
Translates to: KVLLKECSSFFIPTLNKPPIRLP*DFDKPA
Trigger: AGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTGG...AGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTCTTTCAGCAGTACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR CAA 90 bp TTACACTTGCCACATTTCAAATATTCAGTAGTCATGTGGCTAGTGGCTACAGATCCAATTCGGCTTCCTTaGGATTTTGACAAACCAGCT +
Preference number: 5 (lower is better)
Translates to: LHLPHFKYSVVMWLVATDPIRLP*DFDKPA
Trigger: AGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTGG...ATCTGTAGCCACTAGCCACATGACTACTGAATATTTGAAATGTGGCAAGTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR CAA 90 bp TGTAGGGAAGAATATAGAACCTGTGTCAATTGGGCCAAGATGTCTTGGATTTCAGGAACACAGAAAAACTaGCATTGTGAAGTAGAGCCA +
Preference number: 5 (lower is better)
Translates to: CREEYRTCVNWAKMSWISGTQKN*HCEVEP
Trigger: TGGCTCTACTTCACAATGCAAGTTTTTCTGTGTTCC...TGAAATCCAAGACATCTTGGCCCAATTGACACAGGTTCTATATTCTTCCCTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GCCTCCTTTAAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTGGAACACAGAAAAACTaGCATTGTGAAGTAGAGCCA +
Preference number: 5 (lower is better)
Translates to: ASFKHRTYTKGIAIELVCGTQKN*HCEVEP
Trigger: TGGCTCTACTTCACAATGCAAGTTTTTCTGTGTTCC...ACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTTAAAGGAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
ENST00000675695.1
CDS-3UTR CAA 90 bp ATGGGTGGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCGTTGCAGTAATTCCTTaGCACTCTTCCGAAAGGCCA +
Preference number: 5 (lower is better)
Translates to: MGGCKLLSLICFRKSLPAVAVIP*HSSERP
Trigger: TGGCCTTTCGGAAGAGTGCAAAGGAATTACTGCAAC...GGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACCACCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675736.1
CDS-3UTR CAA 90 bp TCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCTACAAAGTGCGTTGCAGTAATTCCTTaGCACTCTTCCGAAAGGCCA +
Preference number: 5 (lower is better)
Translates to: SLYLHSINLECGTSSTKCVAVIP*HSSERP
Trigger: TGGCCTTTCGGAAGAGTGCAAAGGAATTACTGCAAC...GCACTTTGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR CAA 90 bp TCCTTTAAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCTTCCCAAATTTGTGTTaGAGCGGAAGTCCTGCATCC +
Preference number: 5 (lower is better)
Translates to: SFKHRTYTKGIAIELVCFFPNLC*SGSPAS
Trigger: GGATGCAGGACTTCCGCTCAAACACAAATTTGGGAA...GAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTTAAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
CDS-3UTR CAA 90 bp GCCAGAATGGTACTCCCAATTTGTTTAATGTTTTCGCTGCTAGTTGCAGTAATTTCTACCTTCCCAAATTaGTGTTTGAGCGGAAGTCCT +
Preference number: 5 (lower is better)
Translates to: ARMVLPICLMFSLLVAVISTFPN*CLSGSP
Trigger: AGGACTTCCGCTCAAACACAAATTTGGGAAGGTAGA...AATTACTGCAACTAGCAGCGAAAACATTAAACAAATTGGGAGTACCATTCTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR CAA 90 bp CCAGAAACCACTCATGTTATTTATGAAAGACCCAATAATTCTGCATTGAGAATGATAGGCCAGATTCCATaGGGTTGCACATTGGGAGGA +
Preference number: 5 (lower is better)
Translates to: PETTHVIYERPNNSALRMIGQIP*GCTLGG
Trigger: TCCTCCCAATGTGCAACCCAATGGAATCTGGCCTAT...CATTCTCAATGCAGAATTATTGGGTCTTTCATAAATAACATGAGTGGTTTCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp CAGAATGGTACTCCCAATTTGTTTAATGTTTTCGCTGCTAGTTGCAGTAATTCCAAACCTGTACAGAACTaGAACTCTTCAAAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: QNGTPNLFNVFAASCSNSKPVQN*NSSKGG
Trigger: CCCACCCTTTGAAGAGTTCAAGTTCTGTACAGGTTT...GGAATTACTGCAACTAGCAGCGAAAACATTAAACAAATTGGGAGTACCATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
CDS-3UTR CAA 90 bp ACTTCCCCAGGTAAGCCAGGTAAACTAAACCTGAAAGTGGTCAGATTAGGAGAATCAAAGTCTGATCACTaGAATATTAACTCAGACTCC +
Preference number: 5 (lower is better)
Translates to: TSPGKPGKLNLKVVRLGESKSDH*NINSDS
Trigger: GGAGTCTGAGTTAATATTCAAGTGATCAGACTTTGA...TTCTCCTAATCTGACCACTTTCAGGTTTAGTTTACCTGGCTTACCTGGGGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp TGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCTACAAGTAACATGGTCTCACTaGAATGATTTGTCAACAAGT +
Preference number: 5 (lower is better)
Translates to: WLQCIRGFHRVHGPSCLQVTWSH*NDLSTS
Trigger: ACTTGTTGACAAATCATTCAAGTGAGACCATGTTAC...TTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp ATAGTTGGCTTCAATGTATTCGAGGGTTTCACAGGGTACATGGACCTTCATGTCGTAACATGGTCTCACTaGAATGATTTGTCAACAAGT +
Preference number: 5 (lower is better)
Translates to: IVGFNVFEGFTGYMDLHVVTWSH*NDLSTS
Trigger: ACTTGTTGACAAATCATTCAAGTGAGACCATGTTAC...GACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCAACTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp AAAGTAGCACTAACATACCAGCTTAAATGCCCAGAAGAGGAGTGGGTTATTCTTTTCTTGAGACTACTATaGTTCTCTGGTGTCAGAGGA +
Preference number: 5 (lower is better)
Translates to: KVALTYQLKCPEEEWVILFLRLL*FSGVRG
Trigger: TCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAA...AAGAATAACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGTTAGTGCTACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp CTGATGTCTCCAGATGTGAACTGTCTTATTGTCTGGAGAGAAGGCATTTTCCAGTTCAGGTTTCCATTCTaGAGACTACTATTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: LMSPDVNCLIVWREGIFQFRFPF*RLLLFS
Trigger: AGAGAACAATAGTAGTCTCAAGAATGGAAACCTGAA...CTGGAAAATGCCTTCTCTCCAGACAATAAGACAGTTCACATCTGGAGACATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp CAGGTACCAAATCTAGTGAAGTACAGTAAACTGCTTGGGACCAGCAAACTAGGTTTCAGGTTTCCATTCTaGAGACTACTATTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: QVPNLVKYSKLLGTSKLGFRFPF*RLLLFS
Trigger: AGAGAACAATAGTAGTCTCAAGAATGGAAACCTGAA...ACCTAGTTTGCTGGTCCCAAGCAGTTTACTGTACTTCACTAGATTTGGTACCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp TGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCGGTCAATTTCAGGTTTaGCAGCTAGGGAATCAAAGA +
Preference number: 5 (lower is better)
Translates to: CSSFFIPTLNKPRVWYFFGQFQV*QLGNQR
Trigger: TCTTTGATTCCCTAGCTGCAAAACCTGAAATTGACC...GAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR CAA 90 bp CTCCTGGATAACGACCAAACTGTAACTTTCGGAAGGGAACAAATTTCCTGTCAATTGCTGGGATTTTTCTaGAGAAATTCTCTTGACTGG +
Preference number: 5 (lower is better)
Translates to: LLDNDQTVTFGREQISCQLLGFF*RNSLDW
Trigger: CCAGTCAAGAGAATTTCTCAAGAAAAATCCCAGCAA...TTGACAGGAAATTTGTTCCCTTCCGAAAGTTACAGTTTGGTCGTTATCCAGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACAAGGAAAGAGGGAACGTaGCTGGGATTTTTCTTGAGA +
Preference number: 5 (lower is better)
Translates to: VTFSNLFSKKSTSPFPQTRKEGT*LGFFLR
Trigger: TCTCAAGAAAAATCCCAGCAACGTTCCCTCTTTCCT...TGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp ACTCCCAATTTGTTTAATGTTTTCGCTGCTAGTTGCAGTAATTCCTTTGCACTCAGGAAAGAGGGAACGTaGCTGGGATTTTTCTTGAGA +
Preference number: 5 (lower is better)
Translates to: TPNLFNVFAASCSNSFALRKEGT*LGFFLR
Trigger: TCTCAAGAAAAATCCCAGCAACGTTCCCTCTTTCCT...GAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAACATTAAACAAATTGGGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GCCAGAATGGTACTCCCAATTTGTTTAATGTTTTCGCTGCTAGTTGCAGTAATTTTTTATGGCAACACATaGCCTTCCCTGAGTGAGATG +
Preference number: 5 (lower is better)
Translates to: ARMVLPICLMFSLLVAVIFYGNT*PSLSEM
Trigger: CATCTCACTCAGGGAAGGCAATGTGTTGCCATAAAA...AATTACTGCAACTAGCAGCGAAAACATTAAACAAATTGGGAGTACCATTCTGGC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR CAA 90 bp TGTAGGGAAGAATATAGAACCTGTGTCAATTGGGCCAAGATGTCTTGGATTTCAGGAAAGGCTAGAATATaGAAAAAGAAGTCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: CREEYRTCVNWAKMSWISGKARI*KKKSRG
Trigger: TCCCCTGGACTTCTTTTTCAATATTCTAGCCTTTCC...TGAAATCCAAGACATCTTGGCCCAATTGACACAGGTTCTATATTCTTCCCTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp ATCTTAAAAGTAGCACTAACATACCAGCTTAAATGCCCAGAAGAGGAGTGGGTTTCTAGGGTAGAAGTTTaGATAGTACGGAAGCAGAGA +
Preference number: 5 (lower is better)
Translates to: ILKVALTYQLKCPEEEWVSRVEV*IVRKQR
Trigger: TCTCTGCTTCCGTACTATCAAAACTTCTACCCTAGA...AACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGTTAGTGCTACTTTTAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR CAA 90 bp AGGTTTGGGAATGTTGTCAGAATGTTGTTGGTTAATACCGATAAAGGAAAACCTCATTGCATAAAGCACTaGGTAAAGGGCCTGTCCCTT +
Preference number: 5 (lower is better)
Translates to: RFGNVVRMLLVNTDKGKPHCIKH*VKGLSL
Trigger: AAGGGACAGGCCCTTTACCAAGTGCTTTATGCAATG...AGGTTTTCCTTTATCGGTATTAACCAACAACATTCTGACAACATTCCCAAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674767.1
CDS-3UTR CAA 90 bp AAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATGCAGAAATGCAGAACTaGTCAGCGTTAAAAGGGCCA +
Preference number: 5 (lower is better)
Translates to: KHRTYTKGIAIELVCFTYAEMQN*SALKGP
Trigger: TGGCCCTTTTAACGCTGACAAGTTCTGCATTTCTGC...ATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000675695.1
CDS-3UTR CAA 90 bp CCTCAGACATTCAGGTTTCCATTCTTGAGACTACTATTGTTCTCTGGTGTCAGACAGCTCCATTCTTTGTaGATAAATAGTGCTTGTAGT +
Preference number: 5 (lower is better)
Translates to: PQTFRFPFLRLLLFSGVRQLHSL*INSACS
Trigger: ACTACAAGCACTATTTATCAACAAAGAATGGAGCTG...TCTGACACCAGAGAACAATAGTAGTCTCAAGAATGGAAACCTGAATGTCTGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp AACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGTGCCAGAGGTACAGCTCCATTCTTTGTaGATAAATAGTGCTTGTAGT +
Preference number: 5 (lower is better)
Translates to: NKFPVNVFFKSQVAVPEVQLHSL*INSACS
Trigger: ACTACAAGCACTATTTATCAACAAAGAATGGAGCTG...TACCTCTGGCACGGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CAA 90 bp TTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTCCATTCAACCAGCTCCATTCTTaGTTGATAAATAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: LFSKKSTSPFPQTFRFPFNQLHS*LINSAC
Trigger: ACAAGCACTATTTATCAACAAAGAATGGAGCTGGTT...GAATGGAAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp TTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCGAACCAGCTCCATTCTTaGTTGATAAATAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: FRKGTNFLSMCSLSLKWPNQLHS*LINSAC
Trigger: ACAAGCACTATTTATCAACAAAGAATGGAGCTGGTT...CGGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCCCTTCCGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CAA 90 bp CCACGTCTTTACAGGAATCTTCCAGGTCTTACCATAGTTGGCTTCAATGTATTCAACCAGCTCCATTCTTaGTTGATAAATAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: PRLYRNLPGLTIVGFNVFNQLHS*LINSAC
Trigger: ACAAGCACTATTTATCAACAAAGAATGGAGCTGGTT...GAATACATTGAAGCCAACTATGGTAAGACCTGGAAGATTCCTGTAAAGACGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GCTACAGATACATCATTTGCAGCATCACACCATGCTCTAGATAATTCTCTGGTCAACCAGCTCCATTCTTaGTTGATAAATAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: ATDTSFAASHHALDNSLVNQLHS*LINSAC
Trigger: ACAAGCACTATTTATCAACAAAGAATGGAGCTGGTT...GACCAGAGAATTATCTAGAGCATGGTGTGATGCTGCAAATGATGTATCTGTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR CAA 90 bp GCACTAACATACCAGCTTAAATGCCCAGAAGAGGAGTGGGTTATTCTTTTCAACAACCAGCTCCATTCTTaGTTGATAAATAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: ALTYQLKCPEEEWVILFNNQLHS*LINSAC
Trigger: ACAAGCACTATTTATCAACAAAGAATGGAGCTGGTT...GTTGAAAAGAATAACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGTTAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp CTTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGTGGCCAACCAGCTCCATTCTTaGTTGATAAATAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: LSEGNKFPVNVFFKSQVANQLHS*LINSAC
Trigger: ACAAGCACTATTTATCAACAAAGAATGGAGCTGGTT...GGCCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCCCTTCCGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CAA 90 bp TCCTTTAAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCCCAATTCGGCTTCCTTaGGATTTTGACAAACCAGCT +
Preference number: 5 (lower is better)
Translates to: SFKHRTYTKGIAIELVCFPIRLP*DFDKPA
Trigger: AGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTGG...GAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTTAAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000675695.1
CDS-3UTR CAA 90 bp TTCCAAGTATATCATGCTTACCTTTATCCTCAGAATACCCTAAATTCACAGAGCCCAATTCGGCTTCCTTaGGATTTTGACAAACCAGCT +
Preference number: 5 (lower is better)
Translates to: FQVYHAYLYPQNTLNSQSPIRLP*DFDKPA
Trigger: AGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTGG...GCTCTGTGAATTTAGGGTATTCTGAGGATAAAGGTAAGCATGATATACTTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674767.1
CDS-3UTR CAA 90 bp TGTAACTTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCAAGCCAATTCGGCTTCCTTaGGATTTTGACAAACCAGCT +
Preference number: 5 (lower is better)
Translates to: CNFRKGTNFLSMCSLSLKPIRLP*DFDKPA
Trigger: AGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTGG...CTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCCCTTCCGAAAGTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CAA 90 bp TCACTGTATCTCTGTGTTTCATGTCATCTCTTAGAGCTGAACTTTCATGCCTTTGGAACACAGAAAAACTaGCATTGTGAAGTAGAGCCA +
Preference number: 5 (lower is better)
Translates to: SLYLCVSCHLLELNFHAFGTQKN*HCEVEP
Trigger: TGGCTCTACTTCACAATGCAAGTTTTTCTGTGTTCC...AAAGGCATGAAAGTTCAGCTCTAAGAGATGACATGAAACACAGAGATACAGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CAA 90 bp AAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATGTTGCAGTAATTCCTTaGCACTCTTCCGAAAGGCCA +
Preference number: 5 (lower is better)
Translates to: KHRTYTKGIAIELVCFTYVAVIP*HSSERP
Trigger: TGGCCTTTCGGAAGAGTGCAAAGGAATTACTGCAAC...ATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
CDS-3UTR CAA 90 bp TCCGGAATGGGTGGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTAGTTGCAGTAATTCCTTaGCACTCTTCCGAAAGGCCA +
Preference number: 5 (lower is better)
Translates to: SGMGGCKLLSLICFRKSLVAVIP*HSSERP
Trigger: TGGCCTTTCGGAAGAGTGCAAAGGAATTACTGCAAC...TAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACCACCCATTCCGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675736.1
CDS-3UTR CAA 90 bp AGGAGCTTGTTAATGGGTCCCTACAAAATCTCTGTATTAGGTTGGGTTAGAAGGAATGGTACTCCCAATTaGTTTAATGTTTTCGCTGCT +
Preference number: 5 (lower is better)
Translates to: RSLLMGPYKISVLGWVRRNGTPN*FNVFAA
Trigger: AGCAGCGAAAACATTAAACAAATTGGGAGTACCATT...CCTTCTAACCCAACCTAATACAGAGATTTTGTAGGGACCCATTAACAAGCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000642952.1
CDS-3UTR CAA 90 bp GTCCAGCACAGTGTAAACTTCGGAAACAGGTATCTGTCTTATCCTATCAAGTTGAATGGTACTCCCAATTaGTTTAATGTTTTCGCTGCT +
Preference number: 5 (lower is better)
Translates to: VQHSVNFGNRYLSYPIKLNGTPN*FNVFAA
Trigger: AGCAGCGAAAACATTAAACAAATTGGGAGTACCATT...CAACTTGATAGGATAAGACAGATACCTGTTTCCGAAGTTTACACTGTGCTGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642177.1
ENST00000642537.1
CDS-3UTR CAA 90 bp CACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATGAATTCCCAAATTTGTGTTaGAGCGGAAGTCCTGCATCC +
Preference number: 5 (lower is better)
Translates to: HRTYTKGIAIELVCFTYEFPNLC*SGSPAS
Trigger: GGATGCAGGACTTCCGCTCAAACACAAATTTGGGAA...TTCATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
CDS-3UTR CAA 90 bp TTATCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTATTCCCAAATTTGTGTTaGAGCGGAAGTCCTGCATCC +
Preference number: 5 (lower is better)
Translates to: LSKVFMLLYKSGMGGCKLFPNLC*SGSPAS
Trigger: GGATGCAGGACTTCCGCTCAAACACAAATTTGGGAA...TAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000457847.1
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675736.1
CDS-3UTR CAA 90 bp TTAAATGCCCAGAAGAGGAGTGGGTTATTCTTTTCAACTAGTATATCCTTCCTTTCTACCTTCCCAAATTaGTGTTTGAGCGGAAGTCCT +
Preference number: 5 (lower is better)
Translates to: LNAQKRSGLFFSTSISFLSTFPN*CLSGSP
Trigger: AGGACTTCCGCTCAAACACAAATTTGGGAAGGTAGA...AAGGAAGGATATACTAGTTGAAAAGAATAACCCACTCCTCTTCTGGGCATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675736.1
CDS-3UTR CAA 90 bp AGAGGAAAATCTGCCAAGCTCCAGAAAGTAGTCCTAAATAGCATAGATAAGATATCTACCTTCCCAAATTaGTGTTTGAGCGGAAGTCCT +
Preference number: 5 (lower is better)
Translates to: RGKSAKLQKVVLNSIDKISTFPN*CLSGSP
Trigger: AGGACTTCCGCTCAAACACAAATTTGGGAAGGTAGA...TATCTTATCTATGCTATTTAGGACTACTTTCTGGAGCTTGGCAGATTTTCCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000674563.1
ENST00000675736.1
CDS-3UTR CAA 90 bp TCCTTTAAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCTCTACCTTCCCAAATTaGTGTTTGAGCGGAAGTCCT +
Preference number: 5 (lower is better)
Translates to: SFKHRTYTKGIAIELVCFSTFPN*CLSGSP
Trigger: AGGACTTCCGCTCAAACACAAATTTGGGAAGGTAGA...GAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTTAAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
CDS-3UTR CAA 90 bp ATGGGTGGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCTCTACCTTCCCAAATTaGTGTTTGAGCGGAAGTCCT +
Preference number: 5 (lower is better)
Translates to: MGGCKLLSLICFRKSLPASTFPN*CLSGSP
Trigger: AGGACTTCCGCTCAAACACAAATTTGGGAAGGTAGA...GGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACCACCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000457847.1
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000674563.1
ENST00000675736.1
CDS-3UTR CAA 90 bp TCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCTACAAAGTGCTCTACCTTCCCAAATTaGTGTTTGAGCGGAAGTCCT +
Preference number: 5 (lower is better)
Translates to: SLYLHSINLECGTSSTKCSTFPN*CLSGSP
Trigger: AGGACTTCCGCTCAAACACAAATTTGGGAAGGTAGA...GCACTTTGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR CAA 90 bp TCCTTTAAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCAAACCTGTACAGAACTaGAACTCTTCAAAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: SFKHRTYTKGIAIELVCFKPVQN*NSSKGG
Trigger: CCCACCCTTTGAAGAGTTCAAGTTCTGTACAGGTTT...GAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTTAAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR CAA 90 bp GCCTCCTTTAAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTCTCACTTGAATGATTaGTCAACAAGTGCCATCAGA +
Preference number: 5 (lower is better)
Translates to: ASFKHRTYTKGIAIELVCSHLND*STSAIR
Trigger: TCTGATGGCACTTGTTGACAAATCATTCAAGTGAGA...ACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTTAAAGGAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR CAA 90 bp TTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTCCATTCTTCAGGTTTCCATTCTaGAGACTACTATTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: LFSKKSTSPFPQTFRFPFFRFPF*RLLLFS
Trigger: AGAGAACAATAGTAGTCTCAAGAATGGAAACCTGAA...GAATGGAAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GCACTAACATACCAGCTTAAATGCCCAGAAGAGGAGTGGGTTATTCTTTTCAACTTCAGGTTTCCATTCTaGAGACTACTATTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: ALTYQLKCPEEEWVILFNFRFPF*RLLLFS
Trigger: AGAGAACAATAGTAGTCTCAAGAATGGAAACCTGAA...GTTGAAAAGAATAACCCACTCCTCTTCTGGGCATTTAAGCTGGTATGTTAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp AGGAGCTTGTTAATGGGTCCCTACAAAATCTCTGTATTAGGTTGGGTTAGAAGGCATTTTGGGACAAGTTaGCTGACAATCTTAAATGTC +
Preference number: 5 (lower is better)
Translates to: RSLLMGPYKISVLGWVRRHFGTS*LTILNV
Trigger: GACATTTAAGATTGTCAGCAAACTTGTCCCAAAATG...CCTTCTAACCCAACCTAATACAGAGATTTTGTAGGGACCCATTAACAAGCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000675695.1
CDS-3UTR CAA 90 bp TTAAATGCCCAGAAGAGGAGTGGGTTATTCTTTTCAACTAGTATATCCTTCCTTTGGGTGACTACCTGGTaGTCCTGGTTATCAATTAAG +
Preference number: 5 (lower is better)
Translates to: LNAQKRSGLFFSTSISFLWVTTW*SWLSIK
Trigger: CTTAATTGATAACCAGGACAACCAGGTAGTCACCCA...AAGGAAGGATATACTAGTTGAAAAGAATAACCCACTCCTCTTCTGGGCATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp ATGGGTGGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCTGGGTGACTACCTGGTaGTCCTGGTTATCAATTAAG +
Preference number: 5 (lower is better)
Translates to: MGGCKLLSLICFRKSLPAWVTTW*SWLSIK
Trigger: CTTAATTGATAACCAGGACAACCAGGTAGTCACCCA...GGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACCACCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp AGAGGAAAATCTGCCAAGCTCCAGAAAGTAGTCCTAAATAGCATAGATAAGATATTTTATGGCAACACATaGCCTTCCCTGAGTGAGATG +
Preference number: 5 (lower is better)
Translates to: RGKSAKLQKVVLNSIDKIFYGNT*PSLSEM
Trigger: CATCTCACTCAGGGAAGGCAATGTGTTGCCATAAAA...TATCTTATCTATGCTATTTAGGACTACTTTCTGGAGCTTGGCAGATTTTCCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp AAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATTCACTAATGTGGAAATaGAGACTGAAAGGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: KHRTYTKGIAIELVCFTYSLMWK*RLKGPP
Trigger: TGGGGGCCCTTTCAGTCTCAATTTCCACATTAGTGA...ATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR CAA 90 bp ACTCCCAATTTGTTTAATGTTTTCGCTGCTAGTTGCAGTAATTCCTTTGCACTCGGAAAGGCTAGAATATaGAAAAAGAAGTCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: TPNLFNVFAASCSNSFALGKARI*KKKSRG
Trigger: TCCCCTGGACTTCTTTTTCAATATTCTAGCCTTTCC...GAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAACATTAAACAAATTGGGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000675736.1
CDS-3UTR CAA 90 bp CCTGAGGCTAAGAACTGTATACTTCATTTAATCCCCCTAAAAACCCTTAGAAGTACTATTCCCCATGCTTaGAATGAATCATCAGAAGGC +
Preference number: 5 (lower is better)
Translates to: PEAKNCILHLIPLKTLRSTIPHA*NESSEG
Trigger: GCCTTCTGATGATTCATTCAAAGCATGGGGAATAGT...ACTTCTAAGGGTTTTTAGGGGGATTAAATGAAGTATACAGTTCTTAGCCTCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000675695.1
CDS-3UTR CAA 90 bp AAGAATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCAACTTTTTGCTaGCGTACCGTGGAAGTAAAG +
Preference number: 5 (lower is better)
Translates to: KNARASLYLHSINLECGTSSTFC*RTVEVK
Trigger: CTTTACTTCCACGGTACGCAAGCAAAAAGTTGAAGA...AGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
CDS-3UTR CAA 90 bp GTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTCTCTAACACACTTCCCAAATTaGTGTTTGAGCGGAAGTCCT +
Preference number: 5 (lower is better)
Translates to: VFMLLYKSGMGGCKLLSLTHFPN*CLSGSP
Trigger: AGGACTTCCGCTCAAACACAAATTTGGGAAGTGTGT...TAGAGAAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645933.1
CDS-3UTR CAA 90 bp AGGAGCTTGTTAATGGGTCCCTACAAAATCTCTGTATTAGGTTGGGTTAGAAGGATAATTGTTGGTAACTaGCTACTAATGACTGACCTG +
Preference number: 5 (lower is better)
Translates to: RSLLMGPYKISVLGWVRRIIVGN*LLMTDL
Trigger: CAGGTCAGTCATTAGTAGCAAGTTACCAACAATTAT...CCTTCTAACCCAACCTAATACAGAGATTTTGTAGGGACCCATTAACAAGCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642952.1
ENST00000644273.1
CDS-3UTR CAA 90 bp CAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTCTGCATTTGATATCTTaGTCCATGGCCCAACAGAGA +
Preference number: 5 (lower is better)
Translates to: QRFSCCFTNPEWVVVSYFLHLIS*SMAQQR
Trigger: TCTCTGTTGGGCCATGGACAAAGATATCAAATGCAG...AAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS CCA 90 bp AAACACATCCTCCAAGTTGTTATCAATACAATCATTAACGCTCCTTaGAAACGTGTCCAGTTGATTCCACTGTGTGCTATCAAATCCAAT +
Preference number: 5 (lower is better)
Translates to: KHILQVVINTIINAP*KRVQLIPLCAIKSN
Trigger: ATTGGATTTGATAGCACACAGTGGAATCAACTGGACACGTTTCCAAGGAGCGTTAATGATTGTATTGATAACAACTTGGAGGATGTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642537.1
ENST00000676371.1
CDS-3UTR CAA 90 bp GCCTCCTTTAAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTCACTTGGTTGTCTTTaGAAAGTATCTCAGTCGTTT +
Preference number: 5 (lower is better)
Translates to: ASFKHRTYTKGIAIELVCSLGCL*KVSQSF
Trigger: AAACGACTGAGATACTTTCAAAAGACAACCAAGTGA...ACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTTAAAGGAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000675695.1
CDS-3UTR CAA 90 bp TCCTTTAAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCGTGCTGCTCACTTGGTaGTCTTTTGAAAGTATCTCA +
Preference number: 5 (lower is better)
Translates to: SFKHRTYTKGIAIELVCFVLLTW*SFESIS
Trigger: TGAGATACTTTCAAAAGACAACCAAGTGAGCAGCAC...GAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTTAAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000675695.1
CDS-3UTR CAA 90 bp GTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTCTCTAGTGCTGCTCACTTGGTaGTCTTTTGAAAGTATCTCA +
Preference number: 5 (lower is better)
Translates to: VFMLLYKSGMGGCKLLSLVLLTW*SFESIS
Trigger: TGAGATACTTTCAAAAGACAACCAAGTGAGCAGCAC...TAGAGAAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp TCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTGTGCTGCTCACTTGGTaGTCTTTTGAAAGTATCTCA +
Preference number: 5 (lower is better)
Translates to: SKVFMLLYKSGMGGCKLLVLLTW*SFESIS
Trigger: TGAGATACTTTCAAAAGACAACCAAGTGAGCAGCAC...AAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp CTGGATAACGACCAAACTGTAACTTTCGGAAGGGAACAAATTTCCTGTCAATGTCAGCTCCATTCTTTGTaGATAAATAGTGCTTGTAGT +
Preference number: 5 (lower is better)
Translates to: LDNDQTVTFGREQISCQCQLHSL*INSACS
Trigger: ACTACAAGCACTATTTATCAACAAAGAATGGAGCTG...ACATTGACAGGAAATTTGTTCCCTTCCGAAAGTTACAGTTTGGTCGTTATCCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CAA 90 bp CCAGAAACCACTCATGTTATTTATGAAAGACCCAATAATTCTGCATTGAGAATGCCAATTCGGCTTCCTTaGGATTTTGACAAACCAGCT +
Preference number: 5 (lower is better)
Translates to: PETTHVIYERPNNSALRMPIRLP*DFDKPA
Trigger: AGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTGG...CATTCTCAATGCAGAATTATTGGGTCTTTCATAAATAACATGAGTGGTTTCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp ATGGGTGGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCGGAACACAGAAAAACTaGCATTGTGAAGTAGAGCCA +
Preference number: 5 (lower is better)
Translates to: MGGCKLLSLICFRKSLPAGTQKN*HCEVEP
Trigger: TGGCTCTACTTCACAATGCAAGTTTTTCTGTGTTCC...GGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACCACCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTCTCTAGGAACACAGAAAAACTaGCATTGTGAAGTAGAGCCA +
Preference number: 5 (lower is better)
Translates to: VFMLLYKSGMGGCKLLSLGTQKN*HCEVEP
Trigger: TGGCTCTACTTCACAATGCAAGTTTTTCTGTGTTCC...TAGAGAAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp TCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCTACAAAGTGCGGAACACAGAAAAACTaGCATTGTGAAGTAGAGCCA +
Preference number: 5 (lower is better)
Translates to: SLYLHSINLECGTSSTKCGTQKN*HCEVEP
Trigger: TGGCTCTACTTCACAATGCAAGTTTTTCTGTGTTCC...GCACTTTGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000374705.5
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CAA 90 bp GAATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCAATGGTACTCCCAATTaGTTTAATGTTTTCGCTGCT +
Preference number: 5 (lower is better)
Translates to: ECSSFFIPTLNKPRVWYFNGTPN*FNVFAA
Trigger: AGCAGCGAAAACATTAAACAAATTGGGAGTACCATT...GAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000642952.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR CAA 90 bp CCATGTACTGAGCAGTGTGCCAGACACTGCAGATTTCTTACAATTTCTTACAATAATGGTACTCCCAATTaGTTTAATGTTTTCGCTGCT +
Preference number: 5 (lower is better)
Translates to: PCTEQCARHCRFLTISYNNGTPN*FNVFAA
Trigger: AGCAGCGAAAACATTAAACAAATTGGGAGTACCATT...ATTGTAAGAAATTGTAAGAAATCTGCAGTGTCTGGCACACTGCTCAGTACATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR CAA 90 bp AGATTGGAAATGGATGATGCTAAACGAAACAATAAGCTGTCAAATAGGATCTGTTCTACCTTCCCAAATTaGTGTTTGAGCGGAAGTCCT +
Preference number: 5 (lower is better)
Translates to: RLEMDDAKRNNKLSNRICSTFPN*CLSGSP
Trigger: AGGACTTCCGCTCAAACACAAATTTGGGAAGGTAGA...ACAGATCCTATTTGACAGCTTATTGTTTCGTTTAGCATCATCCATTTCCAATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS-3UTR CAA 90 bp TTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCTACAAAGTGTCTACCTTCCCAAATTaGTGTTTGAGCGGAAGTCCT +
Preference number: 5 (lower is better)
Translates to: FFIPTLNKPRVWYFFYKVSTFPN*CLSGSP
Trigger: AGGACTTCCGCTCAAACACAAATTTGGGAAGGTAGA...CACTTTGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR CAA 90 bp AAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATAAACCTGTACAGAACTaGAACTCTTCAAAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: KHRTYTKGIAIELVCFTYKPVQN*NSSKGG
Trigger: CCCACCCTTTGAAGAGTTCAAGTTCTGTACAGGTTT...ATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR CAA 90 bp ATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTCCATGTAACATGGTCTCACTaGAATGATTTGTCAACAAGT +
Preference number: 5 (lower is better)
Translates to: ICFRKSLPAHSLRHSGFHVTWSH*NDLSTS
Trigger: ACTTGTTGACAAATCATTCAAGTGAGACCATGTTAC...ATGGAAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp CAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTTTCTTGAGACTACTATaGTTCTCTGGTGTCAGAGGA +
Preference number: 5 (lower is better)
Translates to: QRFSCCFTNPEWVVVSYFFLRLL*FSGVRG
Trigger: TCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAA...AAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000457847.1
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp TGGTTTTATGATAGAAGATACCTTTCAAACTTCTGGCTTCTACCCATACCAGTTTTCTTGAGACTACTATaGTTCTCTGGTGTCAGAGGA +
Preference number: 5 (lower is better)
Translates to: WFYDRRYLSNFWLLPIPVFLRLL*FSGVRG
Trigger: TCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAA...AACTGGTATGGGTAGAAGCCAGAAGTTTGAAAGGTATCTTCTATCATAAAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
CDS-3UTR CAA 90 bp TCCGGAATGGGTGGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACAATTAAGAGGAATCTaGCCTCTCAGGATGTCTCTG +
Preference number: 5 (lower is better)
Translates to: SGMGGCKLLSLICFRKSLQLRGI*PLRMSL
Trigger: CAGAGACATCCTGAGAGGCAAGATTCCTCTTAATTG...TAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACCACCCATTCCGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp CACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATGAAAGGAAAGAGGGAACGTaGCTGGGATTTTTCTTGAGA +
Preference number: 5 (lower is better)
Translates to: HRTYTKGIAIELVCFTYERKEGT*LGFFLR
Trigger: TCTCAAGAAAAATCCCAGCAACGTTCCCTCTTTCCT...TTCATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR CAA 90 bp TCCGGAATGGGTGGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTAAGGAAAGAGGGAACGTaGCTGGGATTTTTCTTGAGA +
Preference number: 5 (lower is better)
Translates to: SGMGGCKLLSLICFRKSLRKEGT*LGFFLR
Trigger: TCTCAAGAAAAATCCCAGCAACGTTCCCTCTTTCCT...TAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACCACCCATTCCGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp TCCGGAATGGGTGGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTATTTTATGGCAACACATaGCCTTCCCTGAGTGAGATG +
Preference number: 5 (lower is better)
Translates to: SGMGGCKLLSLICFRKSLFYGNT*PSLSEM
Trigger: CATCTCACTCAGGGAAGGCAATGTGTTGCCATAAAA...TAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACCACCCATTCCGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp AGCAAACTAGGTAGCATATGGGATAATATTAGGAGACAACTGCTTAACCAAGAAGGAAAGGCTAGAATATaGAAAAAGAAGTCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: SKLGSIWDNIRRQLLNQEGKARI*KKKSRG
Trigger: TCCCCTGGACTTCTTTTTCAATATTCTAGCCTTTCC...TTCTTGGTTAAGCAGTTGTCTCCTAATATTATCCCATATGCTACCTAGTTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp ATTTGTTTAATGTTTTCGCTGCTAGTTGCAGTAATTCCTTTGCACTCTTCCGAATCTAGGGTAGAAGTTTaGATAGTACGGAAGCAGAGA +
Preference number: 5 (lower is better)
Translates to: ICLMFSLLVAVIPLHSSESRVEV*IVRKQR
Trigger: TCTCTGCTTCCGTACTATCAAAACTTCTACCCTAGA...TTCGGAAGAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAACATTAAACAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000642952.1
CDS-3UTR CAA 90 bp TTAAATGCCCAGAAGAGGAGTGGGTTATTCTTTTCAACTAGTATATCCTTCCTTACTATTCCCCATGCTTaGAATGAATCATCAGAAGGC +
Preference number: 5 (lower is better)
Translates to: LNAQKRSGLFFSTSISFLTIPHA*NESSEG
Trigger: GCCTTCTGATGATTCATTCAAAGCATGGGGAATAGT...AAGGAAGGATATACTAGTTGAAAAGAATAACCCACTCCTCTTCTGGGCATTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000675695.1
CDS-3UTR CAA 90 bp TGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCTCTTCAACTTTTTGCTaGCGTACCGTGGAAGTAAAG +
Preference number: 5 (lower is better)
Translates to: CKLLSLICFRKSLPAHSLSSTFC*RTVEVK
Trigger: CTTTACTTCCACGGTACGCAAGCAAAAAGTTGAAGA...GAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000645933.1
CDS-3UTR CAA 90 bp GTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATCACTTGGTTGTCTTTaGAAAGTATCTCAGTCGTTT +
Preference number: 5 (lower is better)
Translates to: VTFSNLFSKKSTSPFPQTSLGCL*KVSQSF
Trigger: AAACGACTGAGATACTTTCAAAAGACAACCAAGTGA...TGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp AAAAGAAGTAGGTATTTGTCTCATTCATCTAGGCTTCTCCACTGTAACCTAGCACAGCTCCATTCTTTGTaGATAAATAGTGCTTGTAGT +
Preference number: 5 (lower is better)
Translates to: KRSRYLSHSSRLLHCNLAQLHSL*INSACS
Trigger: ACTACAAGCACTATTTATCAACAAAGAATGGAGCTG...TGCTAGGTTACAGTGGAGAAGCCTAGATGAATGAGACAAATACCTACTTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000602661.6
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp ACTCCCAATTTGTTTAATGTTTTCGCTGCTAGTTGCAGTAATTCCTTTGCACTCCAGCTCCATTCTTTGTaGATAAATAGTGCTTGTAGT +
Preference number: 5 (lower is better)
Translates to: TPNLFNVFAASCSNSFALQLHSL*INSACS
Trigger: ACTACAAGCACTATTTATCAACAAAGAATGGAGCTG...GAGTGCAAAGGAATTACTGCAACTAGCAGCGAAAACATTAAACAAATTGGGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR CAA 90 bp AAGGAGAGCTTTTCCCTTGTTTATGAGGTCACATGCCAGAAATTTGCTTTTTCTCAGCTCCATTCTTTGTaGATAAATAGTGCTTGTAGT +
Preference number: 5 (lower is better)
Translates to: KESFSLVYEVTCQKFAFSQLHSL*INSACS
Trigger: ACTACAAGCACTATTTATCAACAAAGAATGGAGCTG...AGAAAAAGCAAATTTCTGGCATGTGACCTCATAAACAAGGGAAAAGCTCTCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS-3UTR CAA 90 bp TCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATTCAGGTTTAACCAGCTCCATTCTTaGTTGATAAATAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: SNLFSKKSTSPFPQTFRFNQLHS*LINSAC
Trigger: ACAAGCACTATTTATCAACAAAGAATGGAGCTGGTT...AAACCTGAATGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp AAACCTCAGATTTGTGGGTCTTGGGCACTTGACAGTTATATACTTCATTTTCGTAACCAGCTCCATTCTTaGTTGATAAATAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: KPQICGSWALDSYILHFRNQLHS*LINSAC
Trigger: ACAAGCACTATTTATCAACAAAGAATGGAGCTGGTT...ACGAAAATGAAGTATATAACTGTCAAGTGCCCAAGACCCACAAATCTGAGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CAA 90 bp TACAGTACTGACAGTAGCTACTACTTACACAATACTTACAATGTGCCAGGTACTAATGGTACTCCCAATTaGTTTAATGTTTTCGCTGCT +
Preference number: 5 (lower is better)
Translates to: YSTDSSYYLHNTYNVPGTNGTPN*FNVFAA
Trigger: AGCAGCGAAAACATTAAACAAATTGGGAGTACCATT...AGTACCTGGCACATTGTAAGTATTGTGTAAGTAGTAGCTACTGTCAGTACTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR CAA 90 bp ATTTATCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTTCTTGAGACTACTATaGTTCTCTGGTGTCAGAGGA +
Preference number: 5 (lower is better)
Translates to: IYQRFSCCFTNPEWVVVSFLRLL*FSGVRG
Trigger: TCCTCTGACACCAGAGAACAATAGTAGTCTCAAGAA...ACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGATAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000457847.1
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp AAAAGAAGTAGGTATTTGTCTCATTCATCTAGGCTTCTCCACTGTAACCTAGCATTCAGGTTTCCATTCTaGAGACTACTATTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: KRSRYLSHSSRLLHCNLAFRFPF*RLLLFS
Trigger: AGAGAACAATAGTAGTCTCAAGAATGGAAACCTGAA...TGCTAGGTTACAGTGGAGAAGCCTAGATGAATGAGACAAATACCTACTTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAGACATCAAAGGTTTTCATGTaGCTTTACAAATCCGGAATG +
Preference number: 5 (lower is better)
Translates to: VTFSNLFSKKSTSPFPQTSKVFM*LYKSGM
Trigger: CATTCCGGATTTGTAAAGCAACATGAAAACCTTTGA...TGTCTGAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp AAAAGAAGTAGGTATTTGTCTCATTCATCTAGGCTTCTCCACTGTAACCTAGCATCAAAGGTTTTCATGTaGCTTTACAAATCCGGAATG +
Preference number: 5 (lower is better)
Translates to: KRSRYLSHSSRLLHCNLASKVFM*LYKSGM
Trigger: CATTCCGGATTTGTAAAGCAACATGAAAACCTTTGA...TGCTAGGTTACAGTGGAGAAGCCTAGATGAATGAGACAAATACCTACTTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp AAAAGAAGTAGGTATTTGTCTCATTCATCTAGGCTTCTCCACTGTAACCTAGCACATTTTGGGACAAGTTaGCTGACAATCTTAAATGTC +
Preference number: 5 (lower is better)
Translates to: KRSRYLSHSSRLLHCNLAHFGTS*LTILNV
Trigger: GACATTTAAGATTGTCAGCAAACTTGTCCCAAAATG...TGCTAGGTTACAGTGGAGAAGCCTAGATGAATGAGACAAATACCTACTTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp AAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATGGTCAATTTCAGGTTTaGCAGCTAGGGAATCAAAGA +
Preference number: 5 (lower is better)
Translates to: KHRTYTKGIAIELVCFTYGQFQV*QLGNQR
Trigger: TCTTTGATTCCCTAGCTGCAAAACCTGAAATTGACC...ATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR CAA 90 bp CCAGAAACCACTCATGTTATTTATGAAAGACCCAATAATTCTGCATTGAGAATGGGTCAATTTCAGGTTTaGCAGCTAGGGAATCAAAGA +
Preference number: 5 (lower is better)
Translates to: PETTHVIYERPNNSALRMGQFQV*QLGNQR
Trigger: TCTTTGATTCCCTAGCTGCAAAACCTGAAATTGACC...CATTCTCAATGCAGAATTATTGGGTCTTTCATAAATAACATGAGTGGTTTCTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp AGAGGAAAATCTGCCAAGCTCCAGAAAGTAGTCCTAAATAGCATAGATAAGATACTATCTATGTGCCATTaGAAGTACTGTAGTCGTGTA +
Preference number: 5 (lower is better)
Translates to: RGKSAKLQKVVLNSIDKILSMCH*KYCSRV
Trigger: TACACGACTACAGTACTTCAAATGGCACATAGATAG...TATCTTATCTATGCTATTTAGGACTACTTTCTGGAGCTTGGCAGATTTTCCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp ATGGGTGGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCTTGCTGGGATTTTTCTaGAGAAATTCTCTTGACTGG +
Preference number: 5 (lower is better)
Translates to: MGGCKLLSLICFRKSLPALLGFF*RNSLDW
Trigger: CCAGTCAAGAGAATTTCTCAAGAAAAATCCCAGCAA...GGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACCACCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp GGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCTTGCTGGGATTTTTCTaGAGAAATTCTCTTGACTGG +
Preference number: 5 (lower is better)
Translates to: GCKLLSLICFRKSLPAHSLLGFF*RNSLDW
Trigger: CCAGTCAAGAGAATTTCTCAAGAAAAATCCCAGCAA...GGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp TTATATAGGAGCTTGTTAATGGGTCCCTACAAAATCTCTGTATTAGGTTGGGTTTTGCTGGGATTTTTCTaGAGAAATTCTCTTGACTGG +
Preference number: 5 (lower is better)
Translates to: LYRSLLMGPYKISVLGWVLLGFF*RNSLDW
Trigger: CCAGTCAAGAGAATTTCTCAAGAAAAATCCCAGCAA...AACCCAACCTAATACAGAGATTTTGTAGGGACCCATTAACAAGCTCCTATATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000675695.1
CDS-3UTR CAA 90 bp CACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATGAATCTAGGGTAGAAGTTTaGATAGTACGGAAGCAGAGA +
Preference number: 5 (lower is better)
Translates to: HRTYTKGIAIELVCFTYESRVEV*IVRKQR
Trigger: TCTCTGCTTCCGTACTATCAAAACTTCTACCCTAGA...TTCATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642952.1
ENST00000644273.1
ENST00000675695.1
CDS-3UTR CAA 90 bp AAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATACTATTCCCCATGCTTaGAATGAATCATCAGAAGGC +
Preference number: 5 (lower is better)
Translates to: KHRTYTKGIAIELVCFTYTIPHA*NESSEG
Trigger: GCCTTCTGATGATTCATTCAAAGCATGGGGAATAGT...ATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000675695.1
CDS-3UTR CAA 90 bp GTATATCATGCTTACCTTTATCCTCAGAATACCCTAAATTCACAGAGCAAAACATCTTCAACTTTTTGCTaGCGTACCGTGGAAGTAAAG +
Preference number: 5 (lower is better)
Translates to: VYHAYLYPQNTLNSQSKTSSTFC*RTVEVK
Trigger: CTTTACTTCCACGGTACGCAAGCAAAAAGTTGAAGA...TGTTTTGCTCTGTGAATTTAGGGTATTCTGAGGATAAAGGTAAGCATGATATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674767.1
CDS-3UTR CAA 90 bp AAGAATGCTCGAGCTTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTATAATTGTTGGTAACTaGCTACTAATGACTGACCTG +
Preference number: 5 (lower is better)
Translates to: KNARASLYLHSINLECGTIIVGN*LLMTDL
Trigger: CAGGTCAGTCATTAGTAGCAAGTTACCAACAATTAT...AGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642537.1
ENST00000642952.1
ENST00000645933.1
CDS-3UTR CAA 90 bp TTCATGAAGTCTTTTCTAAATCTACATGGTCCATCTTCTATAGTGGCTTTATCCGTGGGTCTTGGGCACTaGACAGTTATATACTTCATT +
Preference number: 5 (lower is better)
Translates to: FMKSFLNLHGPSSIVALSVGLGH*TVIYFI
Trigger: AATGAAGTATATAACTGTCAAGTGCCCAAGACCCAC...GGATAAAGCCACTATAGAAGATGGACCATGTAGATTTAGAAAAGACTTCATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675232.1
ENST00000675443.1
ENST00000676192.1
CDS-3UTR CAA 90 bp GTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTCTCTATACACTTCCCTAATTTaGAAGGGCTTAAAGGTGAGT +
Preference number: 5 (lower is better)
Translates to: VFMLLYKSGMGGCKLLSLYTSLI*KGLKVS
Trigger: ACTCACCTTTAAGCCCTTCAAAATTAGGGAAGTGTA...TAGAGAAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS-3UTR CAA 90 bp ATGGGTGGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCTCACTTGGTTGTCTTTaGAAAGTATCTCAGTCGTTT +
Preference number: 5 (lower is better)
Translates to: MGGCKLLSLICFRKSLPASLGCL*KVSQSF
Trigger: AAACGACTGAGATACTTTCAAAAGACAACCAAGTGA...GGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACCACCCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp TCCTTTAAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCCAGCTCCATTCTTTGTaGATAAATAGTGCTTGTAGT +
Preference number: 5 (lower is better)
Translates to: SFKHRTYTKGIAIELVCFQLHSL*INSACS
Trigger: ACTACAAGCACTATTTATCAACAAAGAATGGAGCTG...GAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTTAAAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000675695.1
CDS-3UTR CAA 90 bp ATGGGTGGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCAGCTCCATTCTTTGTaGATAAATAGTGCTTGTAGT +
Preference number: 5 (lower is better)
Translates to: MGGCKLLSLICFRKSLPAQLHSL*INSACS
Trigger: ACTACAAGCACTATTTATCAACAAAGAATGGAGCTG...GGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACCACCCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp TGTACTTTCTCTGACTGCTCTCTCTATTTACTAAAAGGTTTGGGAATGTTGTCACAGCTCCATTCTTTGTaGATAAATAGTGCTTGTAGT +
Preference number: 5 (lower is better)
Translates to: CTFSDCSLYLLKGLGMLSQLHSL*INSACS
Trigger: ACTACAAGCACTATTTATCAACAAAGAATGGAGCTG...TGACAACATTCCCAAACCTTTTAGTAAATAGAGAGAGCAGTCAGAGAAAGTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674767.1
CDS-3UTR CAA 90 bp ATCAAGGTACTGCTGAAAGAATGCTCGAGCTTCTTTATACCTACACTCAATAAACAGCTCCATTCTTTGTaGATAAATAGTGCTTGTAGT +
Preference number: 5 (lower is better)
Translates to: IKVLLKECSSFFIPTLNKQLHSL*INSACS
Trigger: ACTACAAGCACTATTTATCAACAAAGAATGGAGCTG...TTTATTGAGTGTAGGTATAAAGAAGCTCGAGCATTCTTTCAGCAGTACCTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675736.1
ENST00000676371.1
CDS-3UTR CAA 90 bp CAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTAACCAGCTCCATTCTTaGTTGATAAATAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: QRFSCCFTNPEWVVVSYFNQLHS*LINSAC
Trigger: ACAAGCACTATTTATCAACAAAGAATGGAGCTGGTT...AAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp TCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCTACAAAGTGCAACCAGCTCCATTCTTaGTTGATAAATAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: SLYLHSINLECGTSSTKCNQLHS*LINSAC
Trigger: ACAAGCACTATTTATCAACAAAGAATGGAGCTGGTT...GCACTTTGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000675232.1
ENST00000675443.1
ENST00000675736.1
ENST00000676192.1
ENST00000676371.1
CDS-3UTR CAA 90 bp TTCACACTTCCCAAACACTGCTACTATAAAGAGCTGTTAAAGCAGAATGAAAGAAACCAGCTCCATTCTTaGTTGATAAATAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: FTLPKHCYYKELLKQNERNQLHS*LINSAC
Trigger: ACAAGCACTATTTATCAACAAAGAATGGAGCTGGTT...TCTTTCATTCTGCTTTAACAGCTCTTTATAGTAGCAGTGTTTGGGAAGTGTGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675668.1
CDS-3UTR CAA 90 bp TGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCAATGGTACTCCCAATTaGTTTAATGTTTTCGCTGCT +
Preference number: 5 (lower is better)
Translates to: CKLLSLICFRKSLPAHSLNGTPN*FNVFAA
Trigger: AGCAGCGAAAACATTAAACAAATTGGGAGTACCATT...GAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675736.1
CDS-3UTR CAA 90 bp ATGGGTGGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCAATGGTACTCCCAATTaGTTTAATGTTTTCGCTGCT +
Preference number: 5 (lower is better)
Translates to: MGGCKLLSLICFRKSLPANGTPN*FNVFAA
Trigger: AGCAGCGAAAACATTAAACAAATTGGGAGTACCATT...GGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACCACCCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675736.1
CDS-3UTR CAA 90 bp TCCTTTAAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCTCAAAGTCTGATCACTaGAATATTAACTCAGACTCC +
Preference number: 5 (lower is better)
Translates to: SFKHRTYTKGIAIELVCFSKSDH*NINSDS
Trigger: GGAGTCTGAGTTAATATTCAAGTGATCAGACTTTGA...GAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTTAAAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS-3UTR CAA 90 bp TTCTTTATACCTACACTCAATAAACCTAGAGTGTGGTACTTCTTCTACAAAGTGTCTCACTTGAATGATTaGTCAACAAGTGCCATCAGA +
Preference number: 5 (lower is better)
Translates to: FFIPTLNKPRVWYFFYKVSHLND*STSAIR
Trigger: TCTGATGGCACTTGTTGACAAATCATTCAAGTGAGA...CACTTTGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602526.1
ENST00000602661.6
ENST00000675736.1
CDS-3UTR CAA 90 bp TGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCGTAACATGGTCTCACTaGAATGATTTGTCAACAAGT +
Preference number: 5 (lower is better)
Translates to: CKLLSLICFRKSLPAHSLVTWSH*NDLSTS
Trigger: ACTTGTTGACAAATCATTCAAGTGAGACCATGTTAC...GAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp AACTGTAACTTTCGGAAGGGAACAAATTTCCTGTCAATGTGTTCTTTAAGTCTCTTCAGGTTTCCATTCTaGAGACTACTATTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: NCNFRKGTNFLSMCSLSLFRFPF*RLLLFS
Trigger: AGAGAACAATAGTAGTCTCAAGAATGGAAACCTGAA...GAGACTTAAAGAACACATTGACAGGAAATTTGTTCCCTTCCGAAAGTTACAGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000602526.1
ENST00000642537.1
ENST00000645933.1
ENST00000675736.1
CDS-3UTR CAA 90 bp AAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTACTTTCTTCAAAGGTTTTCATGTaGCTTTACAAATCCGGAATG +
Preference number: 5 (lower is better)
Translates to: KVFMLLYKSGMGGCKLLSSKVFM*LYKSGM
Trigger: CATTCCGGATTTGTAAAGCAACATGAAAACCTTTGA...AGAAAGTAACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000457847.1
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp TGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCTCTCAAAGGTTTTCATGTaGCTTTACAAATCCGGAATG +
Preference number: 5 (lower is better)
Translates to: CKLLSLICFRKSLPAHSLSKVFM*LYKSGM
Trigger: CATTCCGGATTTGTAAAGCAACATGAAAACCTTTGA...GAGGGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp ATGGGTGGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCTCAAAGGTTTTCATGTaGCTTTACAAATCCGGAATG +
Preference number: 5 (lower is better)
Translates to: MGGCKLLSLICFRKSLPASKVFM*LYKSGM
Trigger: CATTCCGGATTTGTAAAGCAACATGAAAACCTTTGA...GGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACCACCCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000457847.1
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp TTATATAGGAGCTTGTTAATGGGTCCCTACAAAATCTCTGTATTAGGTTGGGTTCATTTTGGGACAAGTTaGCTGACAATCTTAAATGTC +
Preference number: 5 (lower is better)
Translates to: LYRSLLMGPYKISVLGWVHFGTS*LTILNV
Trigger: GACATTTAAGATTGTCAGCAAACTTGTCCCAAAATG...AACCCAACCTAATACAGAGATTTTGTAGGGACCCATTAACAAGCTCCTATATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000675695.1
CDS-3UTR CAA 90 bp GGTTGTAAGTTACTTTCTCTAATTTGTTTTCGAAAAAGTCTACCAGCCCATTCCCATTTTGGGACAAGTTaGCTGACAATCTTAAATGTC +
Preference number: 5 (lower is better)
Translates to: GCKLLSLICFRKSLPAHSHFGTS*LTILNV
Trigger: GACATTTAAGATTGTCAGCAAACTTGTCCCAAAATG...GGAATGGGCTGGTAGACTTTTTCGAAAACAAATTAGAGAAAGTAACTTACAACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp AAGCACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATCTATCTATGTGCCATTaGAAGTACTGTAGTCGTGTA +
Preference number: 5 (lower is better)
Translates to: KHRTYTKGIAIELVCFTYLSMCH*KYCSRV
Trigger: TACACGACTACAGTACTTCAAATGGCACATAGATAG...ATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
CDS GCA 90 bp AAGAAAGATGAACATTTTCAATATAAGGTGAAATATGCCACTGTGTaGTATCAAATCCAATTCGGCTTCCTTTGGATTTTGACAAACCAG +
Preference number: 5 (lower is better)
Translates to: KKDEHFQYKVKYATV*YQIQFGFLWILTNQ
Trigger: CTGGTTTGTCAAAATCCAAAGGAAGCCGAATTGGATTTGATAGCACACAGTGGCATATTTCACCTTATATTGAAAATGTTCATCTTTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000676192.1
CDS-3UTR CAA 90 bp CCAGAAACCACTCATGTTATTTATGAAAGACCCAATAATTCTGCATTGAGAATGCAGCTCCATTCTTTGTaGATAAATAGTGCTTGTAGT +
Preference number: 5 (lower is better)
Translates to: PETTHVIYERPNNSALRMQLHSL*INSACS
Trigger: ACTACAAGCACTATTTATCAACAAAGAATGGAGCTG...CATTCTCAATGCAGAATTATTGGGTCTTTCATAAATAACATGAGTGGTTTCTGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp ATTTATCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTCAGCTCCATTCTTTGTaGATAAATAGTGCTTGTAGT +
Preference number: 5 (lower is better)
Translates to: IYQRFSCCFTNPEWVVVSQLHSL*INSACS
Trigger: ACTACAAGCACTATTTATCAACAAAGAATGGAGCTG...ACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGATAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp CACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATGAAAACCAGCTCCATTCTTaGTTGATAAATAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: HRTYTKGIAIELVCFTYENQLHS*LINSAC
Trigger: ACAAGCACTATTTATCAACAAAGAATGGAGCTGGTT...TTCATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000675695.1
CDS-3UTR CAA 90 bp ACCAGGGCTCAATATCACACTATTGATGAGATTTCACCTTTTATTCCTTCTAAAAACCAGCTCCATTCTTaGTTGATAAATAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: TRAQYHTIDEISPFIPSKNQLHS*LINSAC
Trigger: ACAAGCACTATTTATCAACAAAGAATGGAGCTGGTT...TTTAGAAGGAATAAAAGGTGAAATCTCATCAATAGTGTGATATTGAGCCCTGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674767.1
CDS-3UTR CAA 90 bp CACAGGACCTATACAAAAGGTATTGCCATTGAATTAGTCTGTTTCACTTATGAAAATGGTACTCCCAATTaGTTTAATGTTTTCGCTGCT +
Preference number: 5 (lower is better)
Translates to: HRTYTKGIAIELVCFTYENGTPN*FNVFAA
Trigger: AGCAGCGAAAACATTAAACAAATTGGGAGTACCATT...TTCATAAGTGAAACAGACTAATTCAATGGCAATACCTTTTGTATAGGTCCTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602526.1
ENST00000642952.1
CDS-3UTR CAA 90 bp AGATGTCTTGGATTTCAGACACTCTTAAGACTTTGTACTTCAGGAAAGGATAAAGTAACATGGTCTCACTaGAATGATTTGTCAACAAGT +
Preference number: 5 (lower is better)
Translates to: RCLGFQTLLRLCTSGKDKVTWSH*NDLSTS
Trigger: ACTTGTTGACAAATCATTCAAGTGAGACCATGTTAC...TTTATCCTTTCCTGAAGTACAAAGTCTTAAGAGTGTCTGAAATCCAAGACATCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000602526.1
ENST00000675695.1
ENST00000675736.1
CDS-3UTR CAA 90 bp ATTTATCAAAGGTTTTCATGTTGCTTTACAAATCCGGAATGGGTGGTTGTAAGTTTCAGGTTTCCATTCTaGAGACTACTATTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: IYQRFSCCFTNPEWVVVSFRFPF*RLLLFS
Trigger: AGAGAACAATAGTAGTCTCAAGAATGGAAACCTGAA...ACTTACAACCACCCATTCCGGATTTGTAAAGCAACATGAAAACCTTTGATAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000457847.1
ENST00000602526.1
ENST00000642177.1
ENST00000642537.1
ENST00000645933.1
ENST00000674563.1
ENST00000675695.1
ENST00000675736.1
CDS TCA 72 bp CCGGTAAGGGCACCCGAGTCGCCAGCGGTACCTGTCTaGAGGCGCCCACCCATCCCCGGGTACCGACCTGAG +
Preference number: 6 (lower is better)
Translates to: PVRAPESPAVPV*RRPPIPGYRPE
Trigger: CTCAGGTCGGTACCCGGGGATGGGTGGGCGCCTTCAGACAGGTACCGCTGGCGACTCGGGTGCCCTTACCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS GCA 72 bp GCCTGTGGCCGGCCTCCTCACCAAGGGGTAGGCAGGTaGCCAGAATGCTGGAGGATGCCCGGTAAGGGCACC +
Preference number: 6 (lower is better)
Translates to: ACGRPPHQGVGR*PECWRMPGKGT
Trigger: GGTGCCCTTACCGGGCATCCTCCAGCATTCTGGGCACCTGCCTACCCCTTGGTGAGGAGGCCGGCCACAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS TCA 72 bp GGCCAAGTGGAAGTCTACCACGCGATGCTCGTGGACTaGCTGAGGAGTACCCAGCCCGGAGCGCGCTCAGCC +
Preference number: 6 (lower is better)
Translates to: GQVEVYHAMLVD*LRSTQPGARSA
Trigger: GGCTGAGCGCGCTCCGGGCTGGGTACTCCTCAGTCAGTCCACGAGCATCGCGTGGTAGACTTCCACTTGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS TCA 72 bp TGTCTGAAGGCGCCCACCCATCCCCGGGTACCGACCTaGGCCTCCCGTACCTTACCTCACTCAACAGCAGGC +
Preference number: 6 (lower is better)
Translates to: CLKAPTHPRVPT*ASRTLPHSTAG
Trigger: GCCTGCTGTTGAGTGAGGTAAGGTACGGGAGGCTCAGGTCGGTACCCGGGGATGGGTGGGCGCCTTCAGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS TCA 72 bp AAGTGGAAGTCTACCACGCGATGCTCGTGGACTGACTaGGGAGTACCCAGCCCGGAGCGCGCTCAGCCTGTG +
Preference number: 6 (lower is better)
Translates to: KWKSTTRCSWTD*GVPSPERAQPV
Trigger: CACAGGCTGAGCGCGCTCCGGGCTGGGTACTCCTCAGTCAGTCCACGAGCATCGCGTGGTAGACTTCCACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS GCA 72 bp TTTTCTGCTAAGCAGGATCTGGCTGGATTAGACGGTTaGCCAGTTTGGGCTCCAAAGCAAACTCTTCCACTC +
Preference number: 6 (lower is better)
Translates to: FSAKQDLAGLDG*PVWAPKQTLPL
Trigger: GAGTGGAAGAGTTTGCTTTGGAGCCCAAACTGGGCAACCGTCTAATCCAGCCAGATCCTGCTTAGCAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674633.1
CDS GCA 72 bp TCCCCGGTTCCTTTCTTCTTCCTTGTCAGAACACCCTaGACTTCCTTTCCACTAAGAGTTCTTTCACCGTTC +
Preference number: 6 (lower is better)
Translates to: SPVPFFFLVRTP*TSFPLRVLSPF
Trigger: GAACGGTGAAAGAACTCTTAGTGGAAAGGAAGTGCAGGGTGTTCTGACAAGGAAGAAGAAAGGAACCGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS GCA 72 bp CGCTCCTTGGAAACGTGTCCAGTTGATTCCACTGTGTaGTATCAAATCCAATTCGGCTTCCTTTGGATTTTG +
Preference number: 6 (lower is better)
Translates to: RSLETCPVDSTV*YQIQFGFLWIL
Trigger: CAAAATCCAAAGGAAGCCGAATTGGATTTGATAGCACACAGTGGAATCAACTGGACACGTTTCCAAGGAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642537.1
ENST00000676371.1
CDS CAA 72 bp ATCATCACCCAGATCCAAGAAATCAAGTCCTGCGTATaGTTCTTTCGGCATTTCCCCGGTTCCTTTCTTCTT +
Preference number: 6 (lower is better)
Translates to: IITQIQEIKSCV*FFRHFPGSFLL
Trigger: AAGAAGAAAGGAACCGGGGAAATGCCGAAAGAACAATACGCAGGACTTGATTTCTTGGATCTGGGTGATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS CAA 72 bp CTTGTCAGCGTTAAAAGGGCCAAAACCACGTTCTTATaGATTCTACTCATTAGTCTGTGCTGCTCACTTGGT +
Preference number: 6 (lower is better)
Translates to: LVSVKRAKTTFL*ILLISLCCSLG
Trigger: ACCAAGTGAGCAGCACAGACTAATGAGTAGAATCAATAAGAACGTGGTTTTGGCCCTTTTAACGCTGACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 21 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000490134.1
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000674563.1
ENST00000674633.1
ENST00000674767.1
ENST00000675232.1
ENST00000675443.1
ENST00000675668.1
ENST00000675695.1
ENST00000675736.1
ENST00000676192.1
ENST00000676310.1
ENST00000676371.1
CDS CAA 72 bp CGCCACTGTGTGCTATCAAATCCAATTCGGCTTCCTTaGGATTTTGACAAACCAGCTCCATTCTTTGTTGAT +
Preference number: 6 (lower is better)
Translates to: RHCVLSNPIRLP*DFDKPAPFFVD
Trigger: ATCAACAAAGAATGGAGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTGGATTTGATAGCACACAGTGGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000602661.6
ENST00000642177.1
ENST00000674563.1
ENST00000674633.1
ENST00000675443.1
ENST00000675668.1
ENST00000675695.1
ENST00000675736.1
ENST00000676310.1
CDS CAA 90 bp GTTAAAAATATCATCACCCAGATCCAAGAAATCAAGTCCTGCGTATaGTTCTTTCGGCATTTCCCCGGTTCCTTTCTTCTTCCTTGTCAG +
Preference number: 6 (lower is better)
Translates to: VKNIITQIQEIKSCV*FFRHFPGSFLLPCQ
Trigger: CTGACAAGGAAGAAGAAAGGAACCGGGGAAATGCCGAAAGAACAATACGCAGGACTTGATTTCTTGGATCTGGGTGATGATATTTTTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS TCA 72 bp TTGTCAGCGTTAAAAGGGCCAAAACCACGTTCTTATTaGTTCTACTCATTAGTCTGTGCTGCTCACTTGGTT +
Preference number: 6 (lower is better)
Translates to: LSALKGPKPRSY*FYSLVCAAHLV
Trigger: AACCAAGTGAGCAGCACAGACTAATGAGTAGAATCAATAAGAACGTGGTTTTGGCCCTTTTAACGCTGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 21 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000490134.1
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000674563.1
ENST00000674633.1
ENST00000674767.1
ENST00000675232.1
ENST00000675443.1
ENST00000675668.1
ENST00000675695.1
ENST00000675736.1
ENST00000676192.1
ENST00000676310.1
ENST00000676371.1
CDS GCA 72 bp AAAAATATCATCACCCAGATCCAAGAAATCAAGTCCTaGGTATTGTTCTTTCGGCATTTCCCCGGTTCCTTT +
Preference number: 6 (lower is better)
Translates to: KNIITQIQEIKS*VLFFRHFPGSF
Trigger: AAAGGAACCGGGGAAATGCCGAAAGAACAATACGCAGGACTTGATTTCTTGGATCTGGGTGATGATATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS CCA 72 bp TGGTTTTATACTTTCAGAAGCAGGGGAAACAATCTTTaGCGCATCATTTCACTAGCAGTGATCCTTCAGAGT +
Preference number: 6 (lower is better)
Translates to: WFYTFRSRGNNL*RIISLAVILQS
Trigger: ACTCTGAAGGATCACTGCTAGTGAAATGATGCGCCAAAGATTGTTTCCCCTGCTTCTGAAAGTATAAAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676310.1
CDS CCA 72 bp CTGCATTTGATATCTTTGTCCATGGCCCAACAGAGATaGTTTCCAATCGTTCAAACCCTATTTATCCTCAGA +
Preference number: 6 (lower is better)
Translates to: LHLISLSMAQQR*FPIVQTLFILR
Trigger: TCTGAGGATAAATAGGGTTTGAACGATTGGAAACCATCTCTGTTGGGCCATGGACAAAGATATCAAATGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS CAA 72 bp ACCCACTGTGTGCTATCAAATCCAATTCGGCTTCCTTaGGATTTTGACAAACCAGCTCCATTCTTTGTTGAT +
Preference number: 6 (lower is better)
Translates to: THCVLSNPIRLP*DFDKPAPFFVD
Trigger: ATCAACAAAGAATGGAGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTGGATTTGATAGCACACAGTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490134.1
ENST00000674767.1
CDS CAA 72 bp TGCCACTGTGTGCTATCAAATCCAATTCGGCTTCCTTaGGATTTTGACAAACCAGCTCCATTCTTTGTTGAT +
Preference number: 6 (lower is better)
Translates to: CHCVLSNPIRLP*DFDKPAPFFVD
Trigger: ATCAACAAAGAATGGAGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTGGATTTGATAGCACACAGTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000676192.1
CDS GCA 72 bp TTATTTTCTCCCACCTCAAGGATCATTTCCACTGTGTaGTATCAAATCCAATTCGGCTTCCTTTGGATTTTG +
Preference number: 6 (lower is better)
Translates to: LFSPTSRIISTV*YQIQFGFLWIL
Trigger: CAAAATCCAAAGGAAGCCGAATTGGATTTGATAGCACACAGTGGAAATGATCCTTGAGGTGGGAGAAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374705.5
ENST00000642644.1
ENST00000645933.1
ENST00000675232.1
CDS CAA 72 bp TGTAGTAGTACAACTGAAACAGCAGAAATGCAGAACTaGTCAGCGTTAAAAGGGCCAAAACCACGTTCTTAT +
Preference number: 6 (lower is better)
Translates to: CSSTTETAEMQN*SALKGPKPRSY
Trigger: ATAAGAACGTGGTTTTGGCCCTTTTAACGCTGACAAGTTCTGCATTTCTGCTGTTTCAGTTGTACTACTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 21 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000490134.1
ENST00000602526.1
ENST00000602661.6
ENST00000642177.1
ENST00000642537.1
ENST00000642644.1
ENST00000645933.1
ENST00000674563.1
ENST00000674633.1
ENST00000674767.1
ENST00000675232.1
ENST00000675443.1
ENST00000675668.1
ENST00000675695.1
ENST00000675736.1
ENST00000676192.1
ENST00000676310.1
ENST00000676371.1
CDS CAA 72 bp CTACTCATTAGTCTGTGCTGCTCACTTGGTTGTCTTTaGAAAGTATCTCAGTCGTTTTCATCTTTTTGGATT +
Preference number: 6 (lower is better)
Translates to: LLISLCCSLGCL*KVSQSFSSFWI
Trigger: AATCCAAAAAGATGAAAACGACTGAGATACTTTCAAAAGACAACCAAGTGAGCAGCACAGACTAATGAGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000490134.1
ENST00000602661.6
ENST00000674563.1
ENST00000675232.1
ENST00000675443.1
ENST00000675668.1
ENST00000675695.1
ENST00000675736.1
ENST00000676192.1
CDS CAA 90 bp TGTCCACAAATAGAATCGCTAAAATATAAATGCTTATTCCTGCATTaGATATCTTTGTCCATGGCCCAACAGAGATGGTTTCCAATCGTT +
Preference number: 6 (lower is better)
Translates to: CPQIESLKYKCLFLH*ISLSMAQQRWFPIV
Trigger: AACGATTGGAAACCATCTCTGTTGGGCCATGGACAAAGATATCAAATGCAGGAATAAGCATTTATATTTTAGCGATTCTATTTGTGGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675736.1
CDS CAA 90 bp TTATTGATTCTACTCATTAGTCTGTGCTGCTCACTTGGTTGTCTTTaGAAAGTATCTCAGTCGTTTTCATCTTTTTGGATTTGGAAAGGA +
Preference number: 6 (lower is better)
Translates to: LLILLISLCCSLGCL*KVSQSFSSFWIWKG
Trigger: TCCTTTCCAAATCCAAAAAGATGAAAACGACTGAGATACTTTCAAAAGACAACCAAGTGAGCAGCACAGACTAATGAGTAGAATCAATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000223528.6
ENST00000357998.10
ENST00000448551.6
ENST00000490134.1
ENST00000602661.6
ENST00000674563.1
ENST00000675232.1
ENST00000675443.1
ENST00000675668.1
ENST00000675695.1
ENST00000675736.1
ENST00000676192.1
CDS GCA 72 bp GAACATTTTCAATATAAGGTGAAATATGCCACTGTGTaGTATCAAATCCAATTCGGCTTCCTTTGGATTTTG +
Preference number: 6 (lower is better)
Translates to: EHFQYKVKYATV*YQIQFGFLWIL
Trigger: CAAAATCCAAAGGAAGCCGAATTGGATTTGATAGCACACAGTGGCATATTTCACCTTATATTGAAAATGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602526.1
ENST00000676192.1
CDS CAA 72 bp AGTTTTTCCTCATTCAGTGTGTTTCCTTTCAATCTCTaGTCTGCAATGTTCTCATTTACTTCCATAAAACCA +
Preference number: 6 (lower is better)
Translates to: SFSSFSVFPFNL*SAMFSFTSIKP
Trigger: TGGTTTTATGGAAGTAAATGAGAACATTGCAGACAAGAGATTGAAAGGAAACACACTGAATGAGGAAAAACT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000602661.6
ENST00000675736.1