RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FKBP5 (Homo sapiens)

Ensembl gene IDs: ENSG00000096060

Ensembl transcript IDs: ENST00000357266.9, ENST00000536438.5, ENST00000539068.5, ENST00000542713.1

Found 725 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGGCTCACTCCCTCCACACCACAGTCATTTCTGTTTGTTCCACCTaGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAG +
Preference number: 1 (lower is better)
Translates to: LAHSLHTTVISVCST*SGPVPPLSEPSGQQ
Trigger: CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACAAACAGAAATGACTGTGGTGTGGAGGGAGTGAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR TCA 90 bp GTGATGAAGATGGGGCAGACCTGTTCCAGCTGGAGGGCCTGGGTGTaGATGAGGGCCAGGCTACATCCCTCGAACATCCTTCTTCCCAAG +
Preference number: 1 (lower is better)
Translates to: VMKMGQTCSSWRAWV*MRARLHPSNILLPK
Trigger: CTTGGGAAGAAGGATGTTCGAGGGATGTAGCCTGGCCCTCATTCACACCCAGGCCCTCCAGCTGGAACAGGTCTGCCCCATCTTCATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR CCA 90 bp CAAGTGGCCTCTGAGGTTCTGGCTTTCACGTCTGTGACACTGCTGTaGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGG +
Preference number: 1 (lower is better)
Translates to: QVASEVLAFTSVTLL*NWGDMRPLYCGFCW
Trigger: CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGTCACAGACGTGAAAGCCAGAACCTCAGAGGCCACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR TCA 90 bp CTTTACATTAAACACTGTTCTGTCCTGAGTTGGGGGAAAGCCCATTaGGGAGGGGCCGAGTTCACTGGGACTCTTCCCTCCTTGGCGTGG +
Preference number: 1 (lower is better)
Translates to: LYIKHCSVLSWGKAH*GGAEFTGTLPSLAW
Trigger: CCACGCCAAGGAGGGAAGAGTCCCAGTGAACTCGGCCCCTCCTCAATGGGCTTTCCCCCAACTCAGGACAGAACAGTGTTTAATGTAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR CCA 90 bp TGCCAAGTCAGACACCCTGGAAAGACAAGGCCCGGGAGGGCAGTATaGCAGATTGAAACCTGCCCTGAGTTGGGAAGGGAATATGTACAG +
Preference number: 1 (lower is better)
Translates to: CQVRHPGKTRPGRAV*QIETCPELGREYVQ
Trigger: CTGTACATATTCCCTTCCCAACTCAGGGCAGGTTTCAATCTGCCATACTGCCCTCCCGGGCCTTGTCTTTCCAGGGTGTCTGACTTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR GCA 90 bp CTCTGCTCTCACCTACACATCTGGACTCTGTGCAAATGCATAACATaGCAAGTCAGACACCCTGGAAAGACAAGGCCCGGGAGGGCAGTA +
Preference number: 1 (lower is better)
Translates to: LCSHLHIWTLCKCIT*QVRHPGKTRPGRAV
Trigger: TACTGCCCTCCCGGGCCTTGTCTTTCCAGGGTGTCTGACTTGGCATGTTATGCATTTGCACAGAGTCCAGATGTGTAGGTGAGAGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR TCA 90 bp AGCTGTCTTCAACTCTTTCACAACTCACGCCAGAACAGAGAAGCTTaGCAGGGCAGGAAAAGCGAGCAACTGCGTGTCAAACCTGCAGGT +
Preference number: 1 (lower is better)
Translates to: SCLQLFHNSRQNREA*QGRKSEQLRVKPAG
Trigger: ACCTGCAGGTTTGACACGCAGTTGCTCGCTTTTCCTGCCCTGTCAAGCTTCTCTGTTCTGGCGTGAGTTGTGAAAGAGTTGAAGACAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR CCA 90 bp TGCCCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTaGCTGTGTACCGGCATGGGAAGCTGTCTTCAACTCTTTCACAAC +
Preference number: 1 (lower is better)
Translates to: CPSSMVSSSTGDLGY*LCTGMGSCLQLFHN
Trigger: GTTGTGAAAGAGTTGAAGACAGCTTCCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR TCA 90 bp GGTTCCTTGGGTTGCCAAATGCATTCCCATGAGTGTTTCTTAGGCTaGGGGAATAGAGAGCCATGCTCAATCTGTTTACCCGTAAGGACT +
Preference number: 1 (lower is better)
Translates to: GSLGCQMHSHECFLG*GNREPCSICLPVRT
Trigger: AGTCCTTACGGGTAAACAGATTGAGCATGGCTCTCTATTCCCTCAGCCTAAGAAACACTCATGGGAATGCATTTGGCAACCCAAGGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR GCA 90 bp TTTAGTTCAGCCCATCTCTGCTCTCACCTACACATCTGGACTCTGTaGAAATGCATAACATGCCAAGTCAGACACCCTGGAAAGACAAGG +
Preference number: 1 (lower is better)
Translates to: FSSAHLCSHLHIWTL*KCITCQVRHPGKTR
Trigger: CCTTGTCTTTCCAGGGTGTCTGACTTGGCATGTTATGCATTTGCACAGAGTCCAGATGTGTAGGTGAGAGCAGAGATGGGCTGAACTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR CCA 90 bp CAAGGCCCGGGAGGGCAGTATGGCAGATTGAAACCTGCCCTGAGTTaGGAAGGGAATATGTACAGGAAACTATCTACTAACCATTTTGAA +
Preference number: 1 (lower is better)
Translates to: QGPGGQYGRLKPALS*EGNMYRKLSTNHFE
Trigger: TTCAAAATGGTTAGTAGATAGTTTCCTGTACATATTCCCTTCCCAACTCAGGGCAGGTTTCAATCTGCCATACTGCCCTCCCGGGCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR CCA 90 bp ATACAGATCTTTAGTTCAGCCCATCTCTGCTCTCACCTACACATCTaGACTCTGTGCAAATGCATAACATGCCAAGTCAGACACCCTGGA +
Preference number: 1 (lower is better)
Translates to: IQIFSSAHLCSHLHI*TLCKCITCQVRHPG
Trigger: TCCAGGGTGTCTGACTTGGCATGTTATGCATTTGCACAGAGTCCAGATGTGTAGGTGAGAGCAGAGATGGGCTGAACTAAAGATCTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR TCA 90 bp ACCTTGATCTGGGACTTACAGTCTCCAGAAGTAAATTCCTGTTGTTaGAGCCACCCAGTGTATGGTATTTTACTGTGGCAGCCCAAGCTA +
Preference number: 1 (lower is better)
Translates to: TLIWDLQSPEVNSCC*SHPVYGILLWQPKL
Trigger: TAGCTTGGGCTGCCACAGTAAAATACCATACACTGGGTGGCTTCAACAACAGGAATTTACTTCTGGAGACTGTAAGTCCCAGATCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR TCA 90 bp GTAAATACGCAAATAGAAACAGGAGTACAAGTGGGGATTCTCCTTTaGGGAGGTGATAAGCTCAAAACCACAGATGATACATCCTGCCAG +
Preference number: 1 (lower is better)
Translates to: VNTQIETGVQVGILL*GGDKLKTTDDTSCQ
Trigger: CTGGCAGGATGTATCATCTGTGGTTTTGAGCTTATCACCTCCTCAAAGGAGAATCCCCACTTGTACTCCTGTTTCTATTTGCGTATTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR GCA 90 bp ATATGCAGATGGCATGAAATACAGATCTTTAGTTCAGCCCATCTCTaGTCTCACCTACACATCTGGACTCTGTGCAAATGCATAACATGC +
Preference number: 1 (lower is better)
Translates to: ICRWHEIQIFSSAHL*SHLHIWTLCKCITC
Trigger: GCATGTTATGCATTTGCACAGAGTCCAGATGTGTAGGTGAGAGCAGAGATGGGCTGAACTAAAGATCTGTATTTCATGCCATCTGCATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR TCA 90 bp GGCACTAAAATCAAAGTCTGTCACCCTCTCTGCCTCAGAAGTGTGTaGTACAGGTCATTCATAAGAACACGAAACCAGGGCATTTTATTT +
Preference number: 1 (lower is better)
Translates to: GTKIKVCHPLCLRSV*YRSFIRTRNQGILF
Trigger: AAATAAAATGCCCTGGTTTCGTGTTCTTATGAATGACCTGTATCACACACTTCTGAGGCAGAGAGGGTGACAGACTTTGATTTTAGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR CCA 90 bp AAGCTAGGTGGCCTTTTTAGTATCAAATTTCAATCTTGGCCTCACTaGAACCATGCTCTACAGAGCTTTCCCAACAGTTTAGCAAGTAAG +
Preference number: 1 (lower is better)
Translates to: KLGGLFSIKFQSWPH*NHALQSFPNSLASK
Trigger: CTTACTTGCTAAACTGTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGATACTAAAAAGGCCACCTAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR CCA 90 bp ATCTGCAAAAAGCTAGGTGGCCTTTTTAGTATCAAATTTCAATCTTaGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACAGTTTA +
Preference number: 1 (lower is better)
Translates to: ICKKLGGLFSIKFQS*PHWNHALQSFPNSL
Trigger: TAAACTGTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGATACTAAAAAGGCCACCTAGCTTTTTGCAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR CCA 90 bp ACAGTCTCCAGAAGTAAATTCCTGTTGTTGAAGCCACCCAGTGTATaGTATTTTACTGTGGCAGCCCAAGCTAAGACAATACTTAAATTT +
Preference number: 1 (lower is better)
Translates to: TVSRSKFLLLKPPSV*YFTVAAQAKTILKF
Trigger: AAATTTAAGTATTGTCTTAGCTTGGGCTGCCACAGTAAAATACCATACACTGGGTGGCTTCAACAACAGGAATTTACTTCTGGAGACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR TCA 90 bp CCTCATATGCTGACTTGGCAATCCATATGCAGCCTAAAAGGTGGTTaGAAGATGTCTGTGGACTTCTACACAAATTGTTTAAGATTATTG +
Preference number: 1 (lower is better)
Translates to: PHMLTWQSICSLKGG*KMSVDFYTNCLRLL
Trigger: CAATAATCTTAAACAATTTGTGTAGAAGTCCACAGACATCTTTCAACCACCTTTTAGGCTGCATATGGATTGCCAAGTCAGCATATGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR TCA 90 bp TTCTCTAGTTGTTTCATTTGGATTAACATTGCCACTCCTCCCTCCTaGCAAGGTTGTAACTTAATAATAGCATGTCTTATAGCAGATGCC +
Preference number: 1 (lower is better)
Translates to: FSSCFIWINIATPPS*QGCNLIIACLIADA
Trigger: GGCATCTGCTATAAGACATGCTATTATTAAGTTACAACCTTGTCAGGAGGGAGGAGTGGCAATGTTAATCCAAATGAAACAACTAGAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR TCA 90 bp GAGGACTTTACATCTTCAATGGCAAAATCATTCCCACTTAAAAGCTaGGTACAATTCAATCCTACTCAGGAGAGAGGCTTTACCCATTTA +
Preference number: 1 (lower is better)
Translates to: EDFTSSMAKSFPLKS*VQFNPTQERGFTHL
Trigger: TAAATGGGTAAAGCCTCTCTCCTGAGTAGGATTGAATTGTACTCAGCTTTTAAGTGGGAATGATTTTGCCATTGAAGATGTAAAGTCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR CCA 90 bp AATATCCGGAGATTCCTCATAAAAGCAAGTGTGCAGGAATCATCTTaGCCATTAGAAGCAATCAATACTCTCCTGTCAGTTTGTTTTGAA +
Preference number: 1 (lower is better)
Translates to: NIRRFLIKASVQESS*PLEAINTLLSVCFE
Trigger: TTCAAAACAAACTGACAGGAGAGTATTGATTGCTTCTAATGGCCAAGATGATTCCTGCACACTTGCTTTTATGAGGAATCTCCGGATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR GCA 90 bp AGCTGGCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTaGAAAAAGCTAGGTGGCCTTTTTAGTATCAAATTTCAATCTTGG +
Preference number: 1 (lower is better)
Translates to: SWHHLSLGIAFLFVI*KKLGGLFSIKFQSW
Trigger: CCAAGATTGAAATTTGATACTAAAAAGGCCACCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGCCAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR CCA 90 bp AATTCCTCATATGCTGACTTGGCAATCCATATGCAGCCTAAAAGGTaGTTGAAAGATGTCTGTGGACTTCTACACAAATTGTTTAAGATT +
Preference number: 1 (lower is better)
Translates to: NSSYADLAIHMQPKR*LKDVCGLLHKLFKI
Trigger: AATCTTAAACAATTTGTGTAGAAGTCCACAGACATCTTTCAACCACCTTTTAGGCTGCATATGGATTGCCAAGTCAGCATATGAGGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR TCA 90 bp GATCCTTATAACATATTGCAATACACTTCCACAAAACTGATTTCATaGCCCAATATTGTCTCAGCTCAAATTCTGAAAACACATGGTGCC +
Preference number: 1 (lower is better)
Translates to: DPYNILQYTSTKLIS*PNIVSAQILKTHGA
Trigger: GGCACCATGTGTTTTCAGAATTTGAGCTGAGACAATATTGGGTCATGAAATCAGTTTTGTGGAAGTGTATTGCAATATGTTATAAGGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR CCA 90 bp TATGAGGGCAAAAATCGTGTCTGTTTAACTCGCTTGCACAATGCCTaGCTTAATATTATGCTGTTACCTGTACTTAATAATTATTTTCAG +
Preference number: 1 (lower is better)
Translates to: YEGKNRVCLTRLHNA*LNIMLLPVLNNYFQ
Trigger: CTGAAAATAATTATTAAGTACAGGTAACAGCATAATATTAAGCCAGGCATTGTGCAAGCGAGTTAAACAGACACGATTTTTGCCCTCATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR TCA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGAACACTGTTCTGTCCTaGGTTGGGGGAAAGCCCATT +
Preference number: 2 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQNTVLS*VGGKPI
Trigger: AATGGGCTTTCCCCCAACTCAGGACAGAACAGTGTT...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR TCA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAACGTGCCACCCCTCAGTaGACCCTCCGGGCAGCAGCA +
Preference number: 2 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQRATPQ*TLRAAA
Trigger: TGCTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACG...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR GCA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGCCTGGAGTGGTCCCGTaGCACCCCTCAGTGAACCCT +
Preference number: 2 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWPGVVP*HPSVNP
Trigger: AGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGG...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CCA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCTTGTTCCACCTGGAGTaGTCCCGTGCCACCCCTCAG +
Preference number: 2 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLLFHLE*SRATPQ
Trigger: CTGAGGGGTGGCACGGGACCACTCCAGGTGGAACAA...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR TCA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAATGGGGGAAAGCCCATTaGGGAGGGGCCGAGTTCACT +
Preference number: 2 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQWGKAH*GGAEFT
Trigger: AGTGAACTCGGCCCCTCCTCAATGGGCTTTCCCCCA...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR TCA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATACGTGCCACCCCTCAGTaGACCCTCCGGGCAGCAGCA +
Preference number: 2 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGIRATPQ*TLRAAA
Trigger: TGCTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACG...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CCA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGTTTTTGGGAAGCTACTaGTTTTGCCATTTGCTTCCA +
Preference number: 2 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQFLGSY*FCHLLP
Trigger: TGGAAGCAAATGGCAAAACCAGTAGCTTCCCAAAAA...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CCA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAATTGTTCCACCTGGAGTaGTCCCGTGCCACCCCTCAG +
Preference number: 2 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQLFHLE*SRATPQ
Trigger: CTGAGGGGTGGCACGGGACCACTCCAGGTGGAACAA...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CCA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGTTGTTCCACCTGGAGTaGTCCCGTGCCACCCCTCAG +
Preference number: 2 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGLFHLE*SRATPQ
Trigger: CTGAGGGGTGGCACGGGACCACTCCAGGTGGAACAA...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CCA 90 bp GCAGATGGAGCATTTGGGGAGGGAATTAGGTTAGATGTGGTCATGAGGGTGGGGCCCGGGAGGGCAGTATaGCAGATTGAAACCTGCCCT +
Preference number: 2 (lower is better)
Translates to: ADGAFGEGIRLDVVMRVGPGRAV*QIETCP
Trigger: AGGGCAGGTTTCAATCTGCCATACTGCCCTCCCGGG...CCCCACCCTCATGACCACATCTAACCTAATTCCCTCCCCAAATGCTCCATCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR TCA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCCAAGCAAGTGGCCTCTaGGGTTCTGGCTTTCACGTC +
Preference number: 2 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLQASGL*GSGFHV
Trigger: GACGTGAAAGCCAGAACCTCAGAGGCCACTTGCTTG...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CCA 90 bp GCAGATGGAGCATTTGGGGAGGGAATTAGGTTAGATGTGGTCATGAGGGTGGGGTGGGGATGCCAGACCTaGTCTGCCTGTATGGAAGGT +
Preference number: 2 (lower is better)
Translates to: ADGAFGEGIRLDVVMRVGWGCQT*SACMEG
Trigger: ACCTTCCATACAGGCAGACCAGGTCTGGCATCCCCA...CCCCACCCTCATGACCACATCTAACCTAATTCCCTCCCCAAATGCTCCATCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR TCA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCTGGGGGAAAGCCCATTaGGGAGGGGCCGAGTTCACT +
Preference number: 2 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTWGKAH*GGAEFT
Trigger: AGTGAACTCGGCCCCTCCTCAATGGGCTTTCCCCCA...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR TCA 90 bp GCAGATGGAGCATTTGGGGAGGGAATTAGGTTAGATGTGGTCATGAGGGTGGGGTGCTTTAGGAGTGAGTaGTACTGTGGTGGGTGGGGA +
Preference number: 2 (lower is better)
Translates to: ADGAFGEGIRLDVVMRVGCFRSE*YCGGWG
Trigger: TCCCCACCCACCACAGTATCACTCACTCCTAAAGCA...CCCCACCCTCATGACCACATCTAACCTAATTCCCTCCCCAAATGCTCCATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR CCA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGCTGGACTTAAGCTGCTaGCTCACTCCCTCCACACCA +
Preference number: 2 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGLDLSC*LTPSTP
Trigger: TGGTGTGGAGGGAGTGAGCCAGCAGCTTAAGTCCAG...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR CAA 90 bp TCAGACACCCTGGAAAGACAAGGCCCGGGAGGGCAGTATGGCAGATaGAAACCTGCCCTGAGTTGGGAAGGGAATATGTACAGGAAACTA +
Preference number: 2 (lower is better)
Translates to: SDTLERQGPGGQYGR*KPALSWEGNMYRKL
Trigger: TAGTTTCCTGTACATATTCCCTTCCCAACTCAGGGCAGGTTTCAATCTGCCATACTGCCCTCCCGGGCCTTGTCTTTCCAGGGTGTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR TCA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGCAGAACAGAGAAGCTTaGCAGGGCAGGAAAAGCGAG +
Preference number: 2 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGQNREA*QGRKSE
Trigger: CTCGCTTTTCCTGCCCTGTCAAGCTTCTCTGTTCTG...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR GCA 90 bp GCAGATGGAGCATTTGGGGAGGGAATTAGGTTAGATGTGGTCATGAGGGTGGGGTGGCAGATTGAAACCTaGCCTGAGTTGGGAAGGGAA +
Preference number: 2 (lower is better)
Translates to: ADGAFGEGIRLDVVMRVGWQIET*PELGRE
Trigger: TTCCCTTCCCAACTCAGGGCAGGTTTCAATCTGCCA...CCCCACCCTCATGACCACATCTAACCTAATTCCCTCCCCAAATGCTCCATCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR CCA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATAAGGGGCCGAGTTCACTaGGACTCTTCCCTCCTTGGC +
Preference number: 2 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGIRGRVH*DSSLLG
Trigger: GCCAAGGAGGGAAGAGTCCCAGTGAACTCGGCCCCT...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CCA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCTCTGTTTGTTCCACCTaGAGTGGTCCCGTGCCACCC +
Preference number: 2 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTSVCST*SGPVPP
Trigger: GGGTGGCACGGGACCACTCCAGGTGGAACAAACAGA...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CCA 90 bp GCAGATGGAGCATTTGGGGAGGGAATTAGGTTAGATGTGGTCATGAGGGTGGGGTCTAAAGTGGTGTGGTaGCTCACGCCTATAGTCCCA +
Preference number: 2 (lower is better)
Translates to: ADGAFGEGIRLDVVMRVGSKVVW*LTPIVP
Trigger: TGGGACTATAGGCGTGAGCCACCACACCACTTTAGA...CCCCACCCTCATGACCACATCTAACCTAATTCCCTCCCCAAATGCTCCATCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR CAA 90 bp AAGCTGTCTTCAACTCTTTCACAACTCACGCCAGAACAGAGAAGCTaGACAGGGCAGGAAAAGCGAGCAACTGCGTGTCAAACCTGCAGG +
Preference number: 2 (lower is better)
Translates to: KLSSTLSQLTPEQRS*TGQEKRATACQTCR
Trigger: CCTGCAGGTTTGACACGCAGTTGCTCGCTTTTCCTGCCCTGTCAAGCTTCTCTGTTCTGGCGTGAGTTGTGAAAGAGTTGAAGACAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR TCA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGAACACTGTTCTGTCCTaGGTTGGGGGAAAGCCCATT +
Preference number: 2 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGNTVLS*VGGKPI
Trigger: AATGGGCTTTCCCCCAACTCAGGACAGAACAGTGTT...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR TCA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAAAACACTGTTCTGTCCTaGGTTGGGGGAAAGCCCATT +
Preference number: 2 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQNTVLS*VGGKPI
Trigger: AATGGGCTTTCCCCCAACTCAGGACAGAACAGTGTT...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR TCA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCGATCTCCAGGGACCCTaGATTGGATACTTGAAGGTT +
Preference number: 2 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLDLQGP*IGYLKV
Trigger: AACCTTCAAGTATCCAATTCAGGGTCCCTGGAGATC...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR TCA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAACCCACATTGTTAGGATaGTCTCCAGGGACCCTGAAT +
Preference number: 2 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQPTLLG*SPGTLN
Trigger: ATTCAGGGTCCCTGGAGATCATCCTAACAATGTGGG...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR TCA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCCAAGCAAGTGGCCTCTaGGGTTCTGGCTTTCACGTC +
Preference number: 2 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTQASGL*GSGFHV
Trigger: GACGTGAAAGCCAGAACCTCAGAGGCCACTTGCTTG...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR TCA 90 bp GCAGATGGAGCATTTGGGGAGGGAATTAGGTTAGATGTGGTCATGAGGGTGGGGGAACACTGTCAGCTATaGGGGCAAAAATCGTGTCTG +
Preference number: 2 (lower is better)
Translates to: ADGAFGEGIRLDVVMRVGEHCQL*GQKSCL
Trigger: CAGACACGATTTTTGCCCTCATAGCTGACAGTGTTC...CCCCACCCTCATGACCACATCTAACCTAATTCCCTCCCCAAATGCTCCATCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR CCA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACAGGGGCCGAGTTCACTaGGACTCTTCCCTCCTTGGC +
Preference number: 2 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNRGRVH*DSSLLG
Trigger: GCCAAGGAGGGAAGAGTCCCAGTGAACTCGGCCCCT...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CCA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGAAGTCAGCAAGCAAGTaGCCTCTGAGGTTCTGGCTT +
Preference number: 2 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGKSASK*PLRFWL
Trigger: AAGCCAGAACCTCAGAGGCCACTTGCTTGCTGACTT...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR TCA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAAGATCTCCAGGGACCCTaGATTGGATACTTGAAGGTT +
Preference number: 2 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQDLQGP*IGYLKV
Trigger: AACCTTCAAGTATCCAATTCAGGGTCCCTGGAGATC...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR TCA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACGGAACTGGGGAGACATaGGACCCCTCTACTGTGGGT +
Preference number: 2 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNGTGET*DPSTVG
Trigger: ACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCC...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR TCA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATACAAGCAAGTGGCCTCTaGGGTTCTGGCTTTCACGTC +
Preference number: 2 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGIQASGL*GSGFHV
Trigger: GACGTGAAAGCCAGAACCTCAGAGGCCACTTGCTTG...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR TCA 90 bp GCAGATGGAGCATTTGGGGAGGGAATTAGGTTAGATGTGGTCATGAGGGTGGGGAAACGAAAGAAACCTTaGCAGAACTCCCATTCTCCC +
Preference number: 2 (lower is better)
Translates to: ADGAFGEGIRLDVVMRVGKRKKP*QNSHSP
Trigger: GGGAGAATGGGAGTTCTGTCAAGGTTTCTTTCGTTT...CCCCACCCTCATGACCACATCTAACCTAATTCCCTCCCCAAATGCTCCATCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR TCA 90 bp GCAGATGGAGCATTTGGGGAGGGAATTAGGTTAGATGTGGTCATGAGGGTGGGGTCTCAGCTCAAATTCTaGAAACACATGGTGCCCTCT +
Preference number: 2 (lower is better)
Translates to: ADGAFGEGIRLDVVMRVGSQLKF*KHMVPS
Trigger: AGAGGGCACCATGTGTTTTCAGAATTTGAGCTGAGA...CCCCACCCTCATGACCACATCTAACCTAATTCCCTCCCCAAATGCTCCATCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR GCA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATAGAGCTGGACTTAAGCTaGTGGCTCACTCCCTCCACA +
Preference number: 2 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGIELDLS*WLTPST
Trigger: TGTGGAGGGAGTGAGCCAGCAGCTTAAGTCCAGCTC...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR GCA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGAAAAGCGAGCAACTaGGTGTCAAACCTGCAGGTG +
Preference number: 2 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTGKASN*VSNLQV
Trigger: CACCTGCAGGTTTGACACGCAGTTGCTCGCTTTTCC...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR GCA 90 bp GCAGATGGAGCATTTGGGGAGGGAATTAGGTTAGATGTGGTCATGAGGGTGGGGTCACTAAGCCCTTTCTaGTTGACATGGAGAAGGCAT +
Preference number: 2 (lower is better)
Translates to: ADGAFGEGIRLDVVMRVGSLSPF*LTWRRH
Trigger: ATGCCTTCTCCATGTCAAGCAGAAAGGGCTTAGTGA...CCCCACCCTCATGACCACATCTAACCTAATTCCCTCCCCAAATGCTCCATCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR CCA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACTCTGTTTGTTCCACCTaGAGTGGTCCCGTGCCACCC +
Preference number: 2 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNSVCST*SGPVPP
Trigger: GGGTGGCACGGGACCACTCCAGGTGGAACAAACAGA...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CCA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATACTGGACTTAAGCTGCTaGCTCACTCCCTCCACACCA +
Preference number: 2 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGILDLSC*LTPSTP
Trigger: TGGTGTGGAGGGAGTGAGCCAGCAGCTTAAGTCCAG...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR TCA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGGTTTCTGCAGTGCTATaGAAGTTCAAAGGTAAAACC +
Preference number: 2 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWVSAVL*KFKGKT
Trigger: GGTTTTACCTTTGAACTTTCATAGCACTGCAGAAAC...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR TCA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGAATGAAAGAAGAAGCTaGGCAGTAGCAATGCTGGGA +
Preference number: 2 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGNERRS*AVAMLG
Trigger: TCCCAGCATTGCTACTGCTCAGCTTCTTCTTTCATT...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR GCA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCGGAAGCTACTGGTTTTaGCATTTGCTTCCAGAATCA +
Preference number: 2 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLGSYWF*HLLPES
Trigger: TGATTCTGGAAGCAAATGGCAAAACCAGTAGCTTCC...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR GCA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGCCTGGAGTGGTCCCGTaGCACCCCTCAGTGAACCCT +
Preference number: 2 (lower is better)
Translates to: ASSESWNSFLVCYLQKARPGVVP*HPSVNP
Trigger: AGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGG...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CCA 90 bp GCAGATGGAGCATTTGGGGAGGGAATTAGGTTAGATGTGGTCATGAGGGTGGGGCACAGAAATTCAGGCTaGAAAGAAACTTGGGGAACA +
Preference number: 2 (lower is better)
Translates to: ADGAFGEGIRLDVVMRVGHRNSG*KETWGT
Trigger: TGTTCCCCAAGTTTCTTTCCAGCCTGAATTTCTGTG...CCCCACCCTCATGACCACATCTAACCTAATTCCCTCCCCAAATGCTCCATCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR TCA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCAAGGTTGATAGAAACTaGAATGAGCTGGACTTAAGC +
Preference number: 2 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLKVDRN*NELDLS
Trigger: GCTTAAGTCCAGCTCATTTCAGTTTCTATCAACCTT...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CCA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGAGGGGCCGAGTTCACTaGGACTCTTCCCTCCTTGGC +
Preference number: 2 (lower is better)
Translates to: ASSESWNSFLVCYLQKARRGRVH*DSSLLG
Trigger: GCCAAGGAGGGAAGAGTCCCAGTGAACTCGGCCCCT...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CCA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACGGCTGTGTACCGGCATaGGAAGCTGTCTTCAACTCT +
Preference number: 2 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNGCVPA*EAVFNS
Trigger: AGAGTTGAAGACAGCTTCCCATGCCGGTACACAGCC...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CCA 90 bp GGCAGATTGAAACCTGCCCTGAGTTGGGAAGGGAATATGTACAGGAAACTATCTGTAATCTCAGCACTTTaGGAAGCTGAGGTGGGAGGA +
Preference number: 2 (lower is better)
Translates to: GRLKPALSWEGNMYRKLSVISAL*EAEVGG
Trigger: TCCTCCCACCTCAGCTTCCCAAAGTGCTGAGATTAC...AGATAGTTTCCTGTACATATTCCCTTCCCAACTCAGGGCAGGTTTCAATCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR CAA 90 bp CACCTTGATCTGGGACTTACAGTCTCCAGAAGTAAATTCCTGTTGTaGAAGCCACCCAGTGTATGGTATTTTACTGTGGCAGCCCAAGCT +
Preference number: 2 (lower is better)
Translates to: HLDLGLTVSRSKFLL*KPPSVWYFTVAAQA
Trigger: AGCTTGGGCTGCCACAGTAAAATACCATACACTGGGTGGCTTCAACAACAGGAATTTACTTCTGGAGACTGTAAGTCCCAGATCAAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR TCA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAAAAGGTTGATAGAAACTaGAATGAGCTGGACTTAAGC +
Preference number: 2 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQKVDRN*NELDLS
Trigger: GCTTAAGTCCAGCTCATTTCAGTTTCTATCAACCTT...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR TCA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACGAGTGTTTCTTAGGCTaGGGGAATAGAGAGCCATGC +
Preference number: 2 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNECFLG*GNREPC
Trigger: GCATGGCTCTCTATTCCCTCAGCCTAAGAAACACTC...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR TCA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATACCAAATGCATTCCCATaGGTGTTTCTTAGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGIPNAFP*VFLRLR
Trigger: CCTCAGCCTAAGAAACACTCATGGGAATGCATTTGG...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR TCA 90 bp GGCAGATTGAAACCTGCCCTGAGTTGGGAAGGGAATATGTACAGGAAACTATCTGCCACTCCTCCCTCCTaGCAAGGTTGTAACTTAATA +
Preference number: 2 (lower is better)
Translates to: GRLKPALSWEGNMYRKLSATPPS*QGCNLI
Trigger: TATTAAGTTACAACCTTGTCAGGAGGGAGGAGTGGC...AGATAGTTTCCTGTACATATTCCCTTCCCAACTCAGGGCAGGTTTCAATCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR GCA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGACTGGTTTTGCCATTTaGTTCCAGAATCACATAGAC +
Preference number: 2 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGTGFAI*FQNHID
Trigger: GTCTATGTGATTCTGGAAGCAAATGGCAAAACCAGT...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR GCA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAAACTGGTTTTGCCATTTaGTTCCAGAATCACATAGAC +
Preference number: 2 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQTGFAI*FQNHID
Trigger: GTCTATGTGATTCTGGAAGCAAATGGCAAAACCAGT...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR GCA 90 bp GCAGATGGAGCATTTGGGGAGGGAATTAGGTTAGATGTGGTCATGAGGGTGGGGAAAACACTTGTTGAGTaGCAACTATGTACCAAGCAA +
Preference number: 2 (lower is better)
Translates to: ADGAFGEGIRLDVVMRVGKTLVE*QLCTKQ
Trigger: TTGCTTGGTACATAGTTGGCACTCAACAAGTGTTTT...CCCCACCCTCATGACCACATCTAACCTAATTCCCTCCCCAAATGCTCCATCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR TCA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGTGGCTTTCACGTCTGTaGCACTGCTGTGGAACTGGG +
Preference number: 2 (lower is better)
Translates to: ASSESWNSFLVCYLQKARWLSRL*HCCGTG
Trigger: CCCAGTTCCACAGCAGTGTCACAGACGTGAAAGCCA...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR GCA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGGAGCTGGACTTAAGCTaGTGGCTCACTCCCTCCACA +
Preference number: 2 (lower is better)
Translates to: ASSESWNSFLVCYLQKARELDLS*WLTPST
Trigger: TGTGGAGGGAGTGAGCCAGCAGCTTAAGTCCAGCTC...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CCA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGCTGGACTTAAGCTGCTaGCTCACTCCCTCCACACCA +
Preference number: 2 (lower is better)
Translates to: ASSESWNSFLVCYLQKARLDLSC*LTPSTP
Trigger: TGGTGTGGAGGGAGTGAGCCAGCAGCTTAAGTCCAG...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CCA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACGGTCAGCTCAAGTACTaGAGATTTAGGCTACTGGCT +
Preference number: 2 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNGQLKY*RFRLLA
Trigger: AGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACC...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR GCA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCCCAGAAACTCTCATCTaGTCATTATCATTGCTGAAG +
Preference number: 2 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTPETLI*SLSLLK
Trigger: CTTCAGCAATGATAATGAGCAGATGAGAGTTTCTGG...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR GCA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGGGAAAAGCGAGCAACTaGGTGTCAAACCTGCAGGTG +
Preference number: 2 (lower is better)
Translates to: ASSESWNSFLVCYLQKARGKASN*VSNLQV
Trigger: CACCTGCAGGTTTGACACGCAGTTGCTCGCTTTTCC...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR GCA 90 bp GGCAGATTGAAACCTGCCCTGAGTTGGGAAGGGAATATGTACAGGAAACTATCTTCTATCATACCCCCATaGTTTCTGGTGATCCATAAG +
Preference number: 2 (lower is better)
Translates to: GRLKPALSWEGNMYRKLSSIIPP*FLVIHK
Trigger: CTTATGGATCACCAGAAAGCATGGGGGTATGATAGA...AGATAGTTTCCTGTACATATTCCCTTCCCAACTCAGGGCAGGTTTCAATCTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR CCA 90 bp AATCCTAGAGTCATAAACGGCTTGTTTCTAAATCACATTACTGGTATCTTGGAACCAAGTCAGACACCCTaGAAAGACAAGGCCCGGGAG +
Preference number: 2 (lower is better)
Translates to: NPRVINGLFLNHITGILEPSQTP*KDKARE
Trigger: CTCCCGGGCCTTGTCTTTCCAGGGTGTCTGACTTGG...TTCCAAGATACCAGTAATGTGATTTAGAAACAAGCCGTTTATGACTCTAGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR CAA 90 bp TTCTCTTGCTGGTCTTTGAGGACAGGCAGCATTGTCCTCTCCCTTTaGGAATATTCAGGGTTTAGCACCAAGAGGTCTTTAATAAAGGTT +
Preference number: 2 (lower is better)
Translates to: FSCWSLRTGSIVLSL*EYSGFSTKRSLIKV
Trigger: AACCTTTATTAAAGACCTCTTGGTGCTAAACCCTGAATATTCCAAAAGGGAGAGGACAATGCTGCCTGTCCTCAAAGACCAGCAAGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR TCA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGCCCACATTGTTAGGATaGTCTCCAGGGACCCTGAAT +
Preference number: 2 (lower is better)
Translates to: ASSESWNSFLVCYLQKARPTLLG*SPGTLN
Trigger: ATTCAGGGTCCCTGGAGATCATCCTAACAATGTGGG...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR TCA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGGAGTGTTTCTTAGGCTaGGGGAATAGAGAGCCATGC +
Preference number: 2 (lower is better)
Translates to: ASSESWNSFLVCYLQKARECFLG*GNREPC
Trigger: GCATGGCTCTCTATTCCCTCAGCCTAAGAAACACTC...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR TCA 90 bp GGCAGATTGAAACCTGCCCTGAGTTGGGAAGGGAATATGTACAGGAAACTATCTCCTGTCAGTTTGTTTTaGAATTTGTGCATGTCCTCT +
Preference number: 2 (lower is better)
Translates to: GRLKPALSWEGNMYRKLSPVSLF*NLCMSS
Trigger: AGAGGACATGCACAAATTTCAAAACAAACTGACAGG...AGATAGTTTCCTGTACATATTCCCTTCCCAACTCAGGGCAGGTTTCAATCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR TCA 90 bp GCTCCTGTCCTGCAGAACACTGTCAGCTATGAGGGCAAAAATCGTGTCTGTTTATCCAAGAAGGGTTTCTaGGAAGCAATTTATGATGAA +
Preference number: 2 (lower is better)
Translates to: APVLQNTVSYEGKNRVCLSKKGF*EAIYDE
Trigger: TTCATCATAAATTGCTTCTCAGAAACCCTTCTTGGA...TAAACAGACACGATTTTTGCCCTCATAGCTGACAGTGTTCTGCAGGACAGGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR GCA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACGGAAGCTACTGGTTTTaGCATTTGCTTCCAGAATCA +
Preference number: 2 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNGSYWF*HLLPES
Trigger: TGATTCTGGAAGCAAATGGCAAAACCAGTAGCTTCC...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR GCA 90 bp GCTCCTGTCCTGCAGAACACTGTCAGCTATGAGGGCAAAAATCGTGTCTGTTTAGTTAAAGTACACTTATaGCTCACTGCTTTATACTGC +
Preference number: 2 (lower is better)
Translates to: APVLQNTVSYEGKNRVCLVKVHL*LTALYC
Trigger: GCAGTATAAAGCAGTGAGGCATAAGTGTACTTTAAC...TAAACAGACACGATTTTTGCCCTCATAGCTGACAGTGTTCTGCAGGACAGGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR GCA 90 bp GGCAGATTGAAACCTGCCCTGAGTTGGGAAGGGAATATGTACAGGAAACTATCTTGTACAGACACTCATTaGTTTCTGCTACTGATCACT +
Preference number: 2 (lower is better)
Translates to: GRLKPALSWEGNMYRKLSCTDTH*FLLLIT
Trigger: AGTGATCAGTAGCAGAAAGCAATGAGTGTCTGTACA...AGATAGTTTCCTGTACATATTCCCTTCCCAACTCAGGGCAGGTTTCAATCTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR CCA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCTACTGTGGGTTCTGTTaGTTAAAAATGCAACAGACT +
Preference number: 2 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTYCGFC*LKMQQT
Trigger: AGTCTGTTGCATTTTTAACCAACAGAACCCACAGTA...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CCA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGAAGTCAGCAAGCAAGTaGCCTCTGAGGTTCTGGCTT +
Preference number: 2 (lower is better)
Translates to: ASSESWNSFLVCYLQKARKSASK*PLRFWL
Trigger: AAGCCAGAACCTCAGAGGCCACTTGCTTGCTGACTT...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CCA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATAATCAAATTTCAATCTTaGCCTCACTGGAACCATGCT +
Preference number: 2 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGIIKFQS*PHWNHA
Trigger: AGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR TCA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACGTTTCTGCAGTGCTATaGAAGTTCAAAGGTAAAACC +
Preference number: 2 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNVSAVL*KFKGKT
Trigger: GGTTTTACCTTTGAACTTTCATAGCACTGCAGAAAC...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR TCA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGCCAAATGCATTCCCATaGGTGTTTCTTAGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: ASSESWNSFLVCYLQKARPNAFP*VFLRLR
Trigger: CCTCAGCCTAAGAAACACTCATGGGAATGCATTTGG...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR GCA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACTACACATTTAAGACTTaGCCTAGTTCAATGGTCAGC +
Preference number: 2 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNYTFKT*PSSMVS
Trigger: GCTGACCATTGAACTAGGGCAAGTCTTAAATGTGTA...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR GCA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATATTCTTGTTTGTTATCTaGAAAAAGCTAGGTGGCCTT +
Preference number: 2 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGIFLFVI*KKLGGL
Trigger: AAGGCCACCTAGCTTTTTGCAGATAACAAACAAGAA...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR GCA 90 bp GGCAGATTGAAACCTGCCCTGAGTTGGGAAGGGAATATGTACAGGAAACTATCTACACTTATGCCTCACTaGTTTATACTGCTGAAAAAC +
Preference number: 2 (lower is better)
Translates to: GRLKPALSWEGNMYRKLSTLMPH*FILLKN
Trigger: GTTTTTCAGCAGTATAAAGCAGTGAGGCATAAGTGT...AGATAGTTTCCTGTACATATTCCCTTCCCAACTCAGGGCAGGTTTCAATCTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR GCA 90 bp AGGAATGTAAATATGGAATCAAGACTTTTTCTAAAGTGGTGTGGTGGCTCACGCTTAATGCTCCTGTCCTaGAGAACACTGTCAGCTATG +
Preference number: 2 (lower is better)
Translates to: RNVNMESRLFLKWCGGSRLMLLS*RTLSAM
Trigger: CATAGCTGACAGTGTTCTGCAGGACAGGAGCATTAA...GCGTGAGCCACCACACCACTTTAGAAAAAGTCTTGATTCCATATTTACATTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR CCA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACTTTTTGGGAAGCTACTaGTTTTGCCATTTGCTTCCA +
Preference number: 2 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNFLGSY*FCHLLP
Trigger: TGGAAGCAAATGGCAAAACCAGTAGCTTCCCAAAAA...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CCA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATATACTGTGGGTTCTGTTaGTTAAAAATGCAACAGACT +
Preference number: 2 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGIYCGFC*LKMQQT
Trigger: AGTCTGTTGCATTTTTAACCAACAGAACCCACAGTA...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CCA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGCTTGCCCTAGTTCAATaGTCAGCTCAAGTACTGGAG +
Preference number: 2 (lower is better)
Translates to: ASSESWNSFLVCYLQKARLALVQ*SAQVLE
Trigger: CTCCAGTACTTGAGCTGACCATTGAACTAGGGCAAG...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR TCA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGAATGAAAGAAGAAGCTaGGCAGTAGCAATGCTGGGA +
Preference number: 2 (lower is better)
Translates to: ASSESWNSFLVCYLQKARNERRS*AVAMLG
Trigger: TCCCAGCATTGCTACTGCTCAGCTTCTTCTTTCATT...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR TCA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACTTTACCCGTAAGGACTaGAATTCAACTACATGTACA +
Preference number: 2 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNFTRKD*NSTTCT
Trigger: TGTACATGTAGTTGAATTTCAGTCCTTACGGGTAAA...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR TCA 90 bp AGGAATGTAAATATGGAATCAAGACTTTTTCTAAAGTGGTGTGGTGGCTCACGCATTGCTTTCTGCTACTaGTCACTAATTCTGGCCATC +
Preference number: 2 (lower is better)
Translates to: RNVNMESRLFLKWCGGSRIAFCY*SLILAI
Trigger: GATGGCCAGAATTAGTGATCAGTAGCAGAAAGCAAT...GCGTGAGCCACCACACCACTTTAGAAAAAGTCTTGATTCCATATTTACATTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR TCA 90 bp AATCCTAGAGTCATAAACGGCTTGTTTCTAAATCACATTACTGGTATCTTGGAAAACACTGACCAGGTGTaGGTTAATGCTCCTGTCCTG +
Preference number: 2 (lower is better)
Translates to: NPRVINGLFLNHITGILENTDQV*VNAPVL
Trigger: CAGGACAGGAGCATTAACTCACACCTGGTCAGTGTT...TTCCAAGATACCAGTAATGTGATTTAGAAACAAGCCGTTTATGACTCTAGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR GCA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGCCTTGGGTTGCCAAATaGATTCCCATGAGTGTTTCT +
Preference number: 2 (lower is better)
Translates to: ASSESWNSFLVCYLQKARPWVAK*IPMSVS
Trigger: AGAAACACTCATGGGAATGCATTTGGCAACCCAAGG...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CCA 90 bp AATCCTAGAGTCATAAACGGCTTGTTTCTAAATCACATTACTGGTATCTTGGAAAGTTTGAGACCAGCCTaGGAAAGAAAGGGAGACCCT +
Preference number: 2 (lower is better)
Translates to: NPRVINGLFLNHITGILESLRPA*ERKGDP
Trigger: AGGGTCTCCCTTTCTTTCCCAGGCTGGTCTCAAACT...TTCCAAGATACCAGTAATGTGATTTAGAAACAAGCCGTTTATGACTCTAGGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR CAA 90 bp AACACTGTCAGCTATGAGGGCAAAAATCGTGTCTGTTTAACTCGCTaGCACAATGCCTGGCTTAATATTATGCTGTTACCTGTACTTAAT +
Preference number: 2 (lower is better)
Translates to: NTVSYEGKNRVCLTR*HNAWLNIMLLPVLN
Trigger: ATTAAGTACAGGTAACAGCATAATATTAAGCCAGGCATTGTGCAAGCGAGTTAAACAGACACGATTTTTGCCCTCATAGCTGACAGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR CCA 90 bp AATCCTAGAGTCATAAACGGCTTGTTTCTAAATCACATTACTGGTATCTTGGAAGAGAAGGCATATATTTaGGGTGGGGAAGCAATGGGT +
Preference number: 2 (lower is better)
Translates to: NPRVINGLFLNHITGILEEKAYI*GGEAMG
Trigger: ACCCATTGCTTCCCCACCCCAAATATATGCCTTCTC...TTCCAAGATACCAGTAATGTGATTTAGAAACAAGCCGTTTATGACTCTAGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR TCA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGAAGGTTGATAGAAACTaGAATGAGCTGGACTTAAGC +
Preference number: 2 (lower is better)
Translates to: ASSESWNSFLVCYLQKARKVDRN*NELDLS
Trigger: GCTTAAGTCCAGCTCATTTCAGTTTCTATCAACCTT...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR TCA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGGTTTCTGCAGTGCTATaGAAGTTCAAAGGTAAAACC +
Preference number: 2 (lower is better)
Translates to: ASSESWNSFLVCYLQKARVSAVL*KFKGKT
Trigger: GGTTTTACCTTTGAACTTTCATAGCACTGCAGAAAC...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR TCA 90 bp AGGAATGTAAATATGGAATCAAGACTTTTTCTAAAGTGGTGTGGTGGCTCACGCTTCCCACTTAAAAGCTaGGTACAATTCAATCCTACT +
Preference number: 2 (lower is better)
Translates to: RNVNMESRLFLKWCGGSRFPLKS*VQFNPT
Trigger: AGTAGGATTGAATTGTACTCAGCTTTTAAGTGGGAA...GCGTGAGCCACCACACCACTTTAGAAAAAGTCTTGATTCCATATTTACATTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR GCA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGACTGGTTTTGCCATTTaGTTCCAGAATCACATAGAC +
Preference number: 2 (lower is better)
Translates to: ASSESWNSFLVCYLQKARTGFAI*FQNHID
Trigger: GTCTATGTGATTCTGGAAGCAAATGGCAAAACCAGT...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR CAA 90 bp TCCTCATATGCTGACTTGGCAATCCATATGCAGCCTAAAAGGTGGTaGAAAGATGTCTGTGGACTTCTACACAAATTGTTTAAGATTATT +
Preference number: 2 (lower is better)
Translates to: SSYADLAIHMQPKRW*KDVCGLLHKLFKII
Trigger: AATAATCTTAAACAATTTGTGTAGAAGTCCACAGACATCTTTCAACCACCTTTTAGGCTGCATATGGATTGCCAAGTCAGCATATGAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR TCA 90 bp AATCCTAGAGTCATAAACGGCTTGTTTCTAAATCACATTACTGGTATCTTGGAACATGTGTGTGACTGCTaGTCCAGATTTTATCCAAAG +
Preference number: 2 (lower is better)
Translates to: NPRVINGLFLNHITGILEHVCDC*SRFYPK
Trigger: CTTTGGATAAAATCTGGATCAGCAGTCACACACATG...TTCCAAGATACCAGTAATGTGATTTAGAAACAAGCCGTTTATGACTCTAGGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR GCA 90 bp AGGAATGTAAATATGGAATCAAGACTTTTTCTAAAGTGGTGTGGTGGCTCACGCTCTCCTTTTATCATATaGTCTAGTGACTTCATCAAG +
Preference number: 2 (lower is better)
Translates to: RNVNMESRLFLKWCGGSRSPFII*SSDFIK
Trigger: CTTGATGAAGTCACTAGAGCATATGATAAAAGGAGA...GCGTGAGCCACCACACCACTTTAGAAAAAGTCTTGATTCCATATTTACATTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR TCA 90 bp AATCCTAGAGTCATAAACGGCTTGTTTCTAAATCACATTACTGGTATCTTGGAACAATGGGTAGAACACTaGTTAAAACAGAATGAAGGG +
Preference number: 2 (lower is better)
Translates to: NPRVINGLFLNHITGILEQWVEH*LKQNEG
Trigger: CCCTTCATTCTGTTTTAATCAGTGTTCTACCCATTG...TTCCAAGATACCAGTAATGTGATTTAGAAACAAGCCGTTTATGACTCTAGGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR TCA 90 bp AATCCTAGAGTCATAAACGGCTTGTTTCTAAATCACATTACTGGTATCTTGGAAACAAAACTGATTTCATaGCCCAATATTGTCTCAGCT +
Preference number: 2 (lower is better)
Translates to: NPRVINGLFLNHITGILETKLIS*PNIVSA
Trigger: AGCTGAGACAATATTGGGTCATGAAATCAGTTTTGT...TTCCAAGATACCAGTAATGTGATTTAGAAACAAGCCGTTTATGACTCTAGGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR TCA 90 bp AATCCTAGAGTCATAAACGGCTTGTTTCTAAATCACATTACTGGTATCTTGGAAACACTTCCACAAAACTaGTTTCATGACCCAATATTG +
Preference number: 2 (lower is better)
Translates to: NPRVINGLFLNHITGILETLPQN*FHDPIL
Trigger: CAATATTGGGTCATGAAATCAGTTTTGTGGAAGTGT...TTCCAAGATACCAGTAATGTGATTTAGAAACAAGCCGTTTATGACTCTAGGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR TCA 72 bp ATGGGGCAGACCTGTTCCAGCTGGAGGGCCTGGGTGTaGATGAGGGCCAGGCTACATCCCTCGAACATCCTT +
Preference number: 3 (lower is better)
Translates to: MGQTCSSWRAWV*MRARLHPSNIL
Trigger: AAGGATGTTCGAGGGATGTAGCCTGGCCCTCATTCACACCCAGGCCCTCCAGCTGGAACAGGTCTGCCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR CAA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGGGGAAGCTACTGGTTTaGCCATTTGCTTCCAGAATC +
Preference number: 3 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQGKLLV*PFASRI
Trigger: GATTCTGGAAGCAAATGGCAAAACCAGTAGCTTCCC...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR CCA 72 bp TCCCTCCACACCACAGTCATTTCTGTTTGTTCCACCTaGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCC +
Preference number: 3 (lower is better)
Translates to: SLHTTVISVCST*SGPVPPLSEPS
Trigger: GGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACAAACAGAAATGACTGTGGTGTGGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR TCA 72 bp AAACACTGTTCTGTCCTGAGTTGGGGGAAAGCCCATTaGGGAGGGGCCGAGTTCACTGGGACTCTTCCCTCC +
Preference number: 3 (lower is better)
Translates to: KHCSVLSWGKAH*GGAEFTGTLPS
Trigger: GGAGGGAAGAGTCCCAGTGAACTCGGCCCCTCCTCAATGGGCTTTCCCCCAACTCAGGACAGAACAGTGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR CCA 72 bp AGACACCCTGGAAAGACAAGGCCCGGGAGGGCAGTATaGCAGATTGAAACCTGCCCTGAGTTGGGAAGGGAA +
Preference number: 3 (lower is better)
Translates to: RHPGKTRPGRAV*QIETCPELGRE
Trigger: TTCCCTTCCCAACTCAGGGCAGGTTTCAATCTGCCATACTGCCCTCCCGGGCCTTGTCTTTCCAGGGTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR CCA 72 bp TCTGAGGTTCTGGCTTTCACGTCTGTGACACTGCTGTaGAACTGGGGAGACATGAGACCCCTCTACTGTGGG +
Preference number: 3 (lower is better)
Translates to: SEVLAFTSVTLL*NWGDMRPLYCG
Trigger: CCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGTCACAGACGTGAAAGCCAGAACCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR GCA 72 bp ACAAGGCCCGGGAGGGCAGTATGGCAGATTGAAACCTaGCCTGAGTTGGGAAGGGAATATGTACAGGAAACT +
Preference number: 3 (lower is better)
Translates to: TRPGRAVWQIET*PELGREYVQET
Trigger: AGTTTCCTGTACATATTCCCTTCCCAACTCAGGGCAGGTTTCAATCTGCCATACTGCCCTCCCGGGCCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR GCA 72 bp CACCTACACATCTGGACTCTGTGCAAATGCATAACATaGCAAGTCAGACACCCTGGAAAGACAAGGCCCGGG +
Preference number: 3 (lower is better)
Translates to: HLHIWTLCKCIT*QVRHPGKTRPG
Trigger: CCCGGGCCTTGTCTTTCCAGGGTGTCTGACTTGGCATGTTATGCATTTGCACAGAGTCCAGATGTGTAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR CCA 72 bp TCTGTGCAAATGCATAACATGCCAAGTCAGACACCCTaGAAAGACAAGGCCCGGGAGGGCAGTATGGCAGAT +
Preference number: 3 (lower is better)
Translates to: SVQMHNMPSQTP*KDKAREGSMAD
Trigger: ATCTGCCATACTGCCCTCCCGGGCCTTGTCTTTCCAGGGTGTCTGACTTGGCATGTTATGCATTTGCACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR CAA 90 bp GCAGATGGAGCATTTGGGGAGGGAATTAGGTTAGATGTGGTCATGAGGGTGGGGCTTGAGGCTAGAAGTTaGAGACCAGCCTGGGAAAGA +
Preference number: 3 (lower is better)
Translates to: ADGAFGEGIRLDVVMRVGLEARS*RPAWER
Trigger: TCTTTCCCAGGCTGGTCTCAAACTTCTAGCCTCAAG...CCCCACCCTCATGACCACATCTAACCTAATTCCCTCCCCAAATGCTCCATCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR CAA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCCTGTTCTGTCCTGAGTaGGGGGAAAGCCCATTGAGG +
Preference number: 3 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTLFCPE*GESPLR
Trigger: CCTCAATGGGCTTTCCCCCAACTCAGGACAGAACAG...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CAA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCGGGAAGCTACTGGTTTaGCCATTTGCTTCCAGAATC +
Preference number: 3 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLGKLLV*PFASRI
Trigger: GATTCTGGAAGCAAATGGCAAAACCAGTAGCTTCCC...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CAA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAACACAGTCATTTCTGTTaGTTCCACCTGGAGTGGTCC +
Preference number: 3 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQHSHFC*FHLEWS
Trigger: GGACCACTCCAGGTGGAACAAACAGAAATGACTGTG...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CAA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGCACAGTCATTTCTGTTaGTTCCACCTGGAGTGGTCC +
Preference number: 3 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGHSHFC*FHLEWS
Trigger: GGACCACTCCAGGTGGAACAAACAGAAATGACTGTG...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR TCA 72 bp CCAACTATGTACCAAGCAAGATGCTTTAGGAGTGAGTaGTACTGTGGTGGGTGGGGATGCCAGACCTGGTCT +
Preference number: 3 (lower is better)
Translates to: PTMYQARCFRSE*YCGGWGCQTWS
Trigger: AGACCAGGTCTGGCATCCCCACCCACCACAGTATCACTCACTCCTAAAGCATCTTGCTTGGTACATAGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR GCA 72 bp GCCCATCTCTGCTCTCACCTACACATCTGGACTCTGTaGAAATGCATAACATGCCAAGTCAGACACCCTGGA +
Preference number: 3 (lower is better)
Translates to: AHLCSHLHIWTL*KCITCQVRHPG
Trigger: TCCAGGGTGTCTGACTTGGCATGTTATGCATTTGCACAGAGTCCAGATGTGTAGGTGAGAGCAGAGATGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR GCA 72 bp GGGATTAGAGCCTTTATAAGAAGAAACTCGGGTGCTTaGTGCCCTCTGCCCTCTCTCCACTCACATGCATGT +
Preference number: 3 (lower is better)
Translates to: GIRAFIRRNSGA*CPLPSLHSHAC
Trigger: ACATGCATGTGAGTGGAGAGAGGGCAGAGGGCAGCAAGCACCCGAGTTTCTTCTTATAAAGGCTCTAATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR CAA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGGGGAAGCTACTGGTTTaGCCATTTGCTTCCAGAATC +
Preference number: 3 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGGKLLV*PFASRI
Trigger: GATTCTGGAAGCAAATGGCAAAACCAGTAGCTTCCC...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CAA 90 bp GCAGATGGAGCATTTGGGGAGGGAATTAGGTTAGATGTGGTCATGAGGGTGGGGAGTAAATTCCTGTTGTaGAAGCCACCCAGTGTATGG +
Preference number: 3 (lower is better)
Translates to: ADGAFGEGIRLDVVMRVGSKFLL*KPPSVW
Trigger: CCATACACTGGGTGGCTTCAACAACAGGAATTTACT...CCCCACCCTCATGACCACATCTAACCTAATTCCCTCCCCAAATGCTCCATCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR TCA 72 bp CAACTCTTTCACAACTCACGCCAGAACAGAGAAGCTTaGCAGGGCAGGAAAAGCGAGCAACTGCGTGTCAAA +
Preference number: 3 (lower is better)
Translates to: QLFHNSRQNREA*QGRKSEQLRVK
Trigger: TTTGACACGCAGTTGCTCGCTTTTCCTGCCCTGTCAAGCTTCTCTGTTCTGGCGTGAGTTGTGAAAGAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR CCA 72 bp TCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTaGCTGTGTACCGGCATGGGAAGCTGTCTTCAACTC +
Preference number: 3 (lower is better)
Translates to: SMVSSSTGDLGY*LCTGMGSCLQL
Trigger: GAGTTGAAGACAGCTTCCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CAA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACCTGTTCTGTCCTGAGTaGGGGGAAAGCCCATTGAGG +
Preference number: 3 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNLFCPE*GESPLR
Trigger: CCTCAATGGGCTTTCCCCCAACTCAGGACAGAACAG...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CAA 90 bp GCAGATGGAGCATTTGGGGAGGGAATTAGGTTAGATGTGGTCATGAGGGTGGGGTGTGCAGGAATCATCTaGGCCATTAGAAGCAATCAA +
Preference number: 3 (lower is better)
Translates to: ADGAFGEGIRLDVVMRVGCAGII*AIRSNQ
Trigger: TTGATTGCTTCTAATGGCCAAGATGATTCCTGCACA...CCCCACCCTCATGACCACATCTAACCTAATTCCCTCCCCAAATGCTCCATCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR CAA 90 bp GCAGATGGAGCATTTGGGGAGGGAATTAGGTTAGATGTGGTCATGAGGGTGGGGATTGTCCTCTCCCTTTaGGAATATTCAGGGTTTAGC +
Preference number: 3 (lower is better)
Translates to: ADGAFGEGIRLDVVMRVGIVLSL*EYSGFS
Trigger: GCTAAACCCTGAATATTCCAAAAGGGAGAGGACAAT...CCCCACCCTCATGACCACATCTAACCTAATTCCCTCCCCAAATGCTCCATCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR GCA 72 bp TCTGGAGGCATTTTTAGTTGTCATAACTGGGTAGGATaGTACTGGCATCTAATGGGCAGAGGCCAGGAATGC +
Preference number: 3 (lower is better)
Translates to: SGGIFSCHNWVG*YWHLMGRGQEC
Trigger: GCATTCCTGGCCTCTGCCCATTAGATGCCAGTAGCATCCTACCCAGTTATGACAACTAAAAATGCCTCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR CCA 72 bp CCCTCCCCAGACACTGATCCTGCTAACACCTTGATCTaGGACTTACAGTCTCCAGAAGTAAATTCCTGTTGT +
Preference number: 3 (lower is better)
Translates to: PSPDTDPANTLI*DLQSPEVNSCC
Trigger: ACAACAGGAATTTACTTCTGGAGACTGTAAGTCCCAGATCAAGGTGTTAGCAGGATCAGTGTCTGGGGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR CAA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCTACTGGTTTTGCCATTaGCTTCCAGAATCACATAGA +
Preference number: 3 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLYWFCH*LPESHR
Trigger: TCTATGTGATTCTGGAAGCAAATGGCAAAACCAGTA...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CAA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAACTACTGTGGGTTCTGTaGGTTAAAAATGCAACAGAC +
Preference number: 3 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQLLWVL*VKNATD
Trigger: GTCTGTTGCATTTTTAACCAACAGAACCCACAGTAG...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CAA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGATCTGCTCATTATCATaGCTGAAGGGTGTTTTAGGA +
Preference number: 3 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGICSLS*LKGVLG
Trigger: TCCTAAAACACCCTTCAGCAATGATAATGAGCAGAT...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CAA 90 bp GGCAGATTGAAACCTGCCCTGAGTTGGGAAGGGAATATGTACAGGAAACTATCTTCATTTGGATTAACATaGCCACTCCTCCCTCCTGAC +
Preference number: 3 (lower is better)
Translates to: GRLKPALSWEGNMYRKLSSFGLT*PLLPPD
Trigger: GTCAGGAGGGAGGAGTGGCAATGTTAATCCAAATGA...AGATAGTTTCCTGTACATATTCCCTTCCCAACTCAGGGCAGGTTTCAATCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR CAA 90 bp GCAGATGGAGCATTTGGGGAGGGAATTAGGTTAGATGTGGTCATGAGGGTGGGGCAACAACAAAACCTTTaGCTATCATTGGGAGCAAAA +
Preference number: 3 (lower is better)
Translates to: ADGAFGEGIRLDVVMRVGQQQNL*LSLGAK
Trigger: TTTTGCTCCCAATGATAGCAAAAGGTTTTGTTGTTG...CCCCACCCTCATGACCACATCTAACCTAATTCCCTCCCCAAATGCTCCATCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR TCA 72 bp GGTTGCCAAATGCATTCCCATGAGTGTTTCTTAGGCTaGGGGAATAGAGAGCCATGCTCAATCTGTTTACCC +
Preference number: 3 (lower is better)
Translates to: GCQMHSHECFLG*GNREPCSICLP
Trigger: GGGTAAACAGATTGAGCATGGCTCTCTATTCCCTCAGCCTAAGAAACACTCATGGGAATGCATTTGGCAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR GCA 72 bp AAAACACTGACCAGGTGTGAGTTAATGCTCCTGTCCTaGAGAACACTGTCAGCTATGAGGGCAAAAATCGTG +
Preference number: 3 (lower is better)
Translates to: KTLTRCELMLLS*RTLSAMRAKIV
Trigger: CACGATTTTTGCCCTCATAGCTGACAGTGTTCTGCAGGACAGGAGCATTAACTCACACCTGGTCAGTGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR CCA 72 bp CCCCTGGTGAACCATAATACACACGTGGGAGACAGCTaGCATCATCTGAGTCTTGGAATAGCTTTCTTGTTT +
Preference number: 3 (lower is better)
Translates to: PLVNHNTHVGDS*HHLSLGIAFLF
Trigger: AAACAAGAAAGCTATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCACCAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CAA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCCTACTGTGGGTTCTGTaGGTTAAAAATGCAACAGAC +
Preference number: 3 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTLLWVL*VKNATD
Trigger: GTCTGTTGCATTTTTAACCAACAGAACCCACAGTAG...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CAA 90 bp GGCAGATTGAAACCTGCCCTGAGTTGGGAAGGGAATATGTACAGGAAACTATCTCTGTACAGACACTCATaGCTTTCTGCTACTGATCAC +
Preference number: 3 (lower is better)
Translates to: GRLKPALSWEGNMYRKLSLYRHS*LSATDH
Trigger: GTGATCAGTAGCAGAAAGCAATGAGTGTCTGTACAG...AGATAGTTTCCTGTACATATTCCCTTCCCAACTCAGGGCAGGTTTCAATCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR CAA 90 bp AGGAATGTAAATATGGAATCAAGACTTTTTCTAAAGTGGTGTGGTGGCTCACGCGTGTTCTTAGCCTTCTaGCCACTCTGCTGCCAAGTC +
Preference number: 3 (lower is better)
Translates to: RNVNMESRLFLKWCGGSRVFLAF*PLCCQV
Trigger: GACTTGGCAGCAGAGTGGCAAGAAGGCTAAGAACAC...GCGTGAGCCACCACACCACTTTAGAAAAAGTCTTGATTCCATATTTACATTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR GCA 72 bp TGGCATGAAATACAGATCTTTAGTTCAGCCCATCTCTaGTCTCACCTACACATCTGGACTCTGTGCAAATGC +
Preference number: 3 (lower is better)
Translates to: WHEIQIFSSAHL*SHLHIWTLCKC
Trigger: GCATTTGCACAGAGTCCAGATGTGTAGGTGAGAGCAGAGATGGGCTGAACTAAAGATCTGTATTTCATGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR CAA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCTACTGGTTTTGCCATTaGCTTCCAGAATCACATAGA +
Preference number: 3 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTYWFCH*LPESHR
Trigger: TCTATGTGATTCTGGAAGCAAATGGCAAAACCAGTA...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CAA 90 bp AGGAATGTAAATATGGAATCAAGACTTTTTCTAAAGTGGTGTGGTGGCTCACGCAGCGAAAAGTCTGTCTaGTACTCCCTGCTTCTGAGG +
Preference number: 3 (lower is better)
Translates to: RNVNMESRLFLKWCGGSRSEKSV*YSLLLR
Trigger: CCTCAGAAGCAGGGAGTACAAGACAGACTTTTCGCT...GCGTGAGCCACCACACCACTTTAGAAAAAGTCTTGATTCCATATTTACATTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR TCA 72 bp TGGGACTTACAGTCTCCAGAAGTAAATTCCTGTTGTTaGAGCCACCCAGTGTATGGTATTTTACTGTGGCAG +
Preference number: 3 (lower is better)
Translates to: WDLQSPEVNSCC*SHPVYGILLWQ
Trigger: CTGCCACAGTAAAATACCATACACTGGGTGGCTTCAACAACAGGAATTTACTTCTGGAGACTGTAAGTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR CCA 72 bp AAGCTAGGTGGCCTTTTTAGTATCAAATTTCAATCTTaGCCTCACTGGAACCATGCTCTACAGAGCTTTCCC +
Preference number: 3 (lower is better)
Translates to: KLGGLFSIKFQS*PHWNHALQSFP
Trigger: GGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGATACTAAAAAGGCCACCTAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CAA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATATACTGGTTTTGCCATTaGCTTCCAGAATCACATAGA +
Preference number: 3 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGIYWFCH*LPESHR
Trigger: TCTATGTGATTCTGGAAGCAAATGGCAAAACCAGTA...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CAA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATAATCTGCTCATTATCATaGCTGAAGGGTGTTTTAGGA +
Preference number: 3 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGIICSLS*LKGVLG
Trigger: TCCTAAAACACCCTTCAGCAATGATAATGAGCAGAT...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CAA 90 bp AGGAATATCCGGAGATTCCTCATAAAAGCAAGTGTGCAGGAATCATCTTGGCCATCCTGTCAGTTTGTTTaGAAATTTGTGCATGTCCTC +
Preference number: 3 (lower is better)
Translates to: RNIRRFLIKASVQESSWPSCQFV*KFVHVL
Trigger: GAGGACATGCACAAATTTCAAAACAAACTGACAGGA...TGGCCAAGATGATTCCTGCACACTTGCTTTTATGAGGAATCTCCGGATATTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR TCA 72 bp CAAATAGAAACAGGAGTACAAGTGGGGATTCTCCTTTaGGGAGGTGATAAGCTCAAAACCACAGATGATACA +
Preference number: 3 (lower is better)
Translates to: QIETGVQVGILL*GGDKLKTTDDT
Trigger: TGTATCATCTGTGGTTTTGAGCTTATCACCTCCTCAAAGGAGAATCCCCACTTGTACTCCTGTTTCTATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR CCA 72 bp GGCCTTTTTAGTATCAAATTTCAATCTTGGCCTCACTaGAACCATGCTCTACAGAGCTTTCCCAACAGTTTA +
Preference number: 3 (lower is better)
Translates to: GLFSIKFQSWPH*NHALQSFPNSL
Trigger: TAAACTGTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGATACTAAAAAGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR CCA 72 bp TATGCTGACTTGGCAATCCATATGCAGCCTAAAAGGTaGTTGAAAGATGTCTGTGGACTTCTACACAAATTG +
Preference number: 3 (lower is better)
Translates to: YADLAIHMQPKR*LKDVCGLLHKL
Trigger: CAATTTGTGTAGAAGTCCACAGACATCTTTCAACCACCTTTTAGGCTGCATATGGATTGCCAAGTCAGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR CCA 72 bp AGAAGTAAATTCCTGTTGTTGAAGCCACCCAGTGTATaGTATTTTACTGTGGCAGCCCAAGCTAAGACAATA +
Preference number: 3 (lower is better)
Translates to: RSKFLLLKPPSV*YFTVAAQAKTI
Trigger: TATTGTCTTAGCTTGGGCTGCCACAGTAAAATACCATACACTGGGTGGCTTCAACAACAGGAATTTACTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR CAA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACAAGCAAAATCAGCTTTaGCTCTTCATATTTCGTAGG +
Preference number: 3 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNKQNQL*LFIFRR
Trigger: CCTACGAAATATGAAGAGCAAAAGCTGATTTTGCTT...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CAA 90 bp AGGAATATCCGGAGATTCCTCATAAAAGCAAGTGTGCAGGAATCATCTTGGCCATCATTCCAAAAACACTaGTTGAGTGCCAACTATGTA +
Preference number: 3 (lower is better)
Translates to: RNIRRFLIKASVQESSWPSFQKH*LSANYV
Trigger: TACATAGTTGGCACTCAACAAGTGTTTTTGGAATGA...TGGCCAAGATGATTCCTGCACACTTGCTTTTATGAGGAATCTCCGGATATTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR CAA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGTATCAAATTTCAATCTaGGCCTCACTGGAACCATGC +
Preference number: 3 (lower is better)
Translates to: ASSESWNSFLVCYLQKARYQISI*ASLEPC
Trigger: GCATGGTTCCAGTGAGGCCAAGATTGAAATTTGATA...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR TCA 72 bp CATTTGAAGAGCAATAAAGCCCATTTTTCCCAATTCTaGGCTTATTCTATCATACCCCCATGCTTTCTGGTG +
Preference number: 3 (lower is better)
Translates to: HLKSNKAHFSQF*AYSIIPPCFLV
Trigger: CACCAGAAAGCATGGGGGTATGATAGAATAAGCTCAGAATTGGGAAAAATGGGCTTTATTGCTCTTCAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR CCA 72 bp AGATTCCTCATAAAAGCAAGTGTGCAGGAATCATCTTaGCCATTAGAAGCAATCAATACTCTCCTGTCAGTT +
Preference number: 3 (lower is better)
Translates to: RFLIKASVQESS*PLEAINTLLSV
Trigger: AACTGACAGGAGAGTATTGATTGCTTCTAATGGCCAAGATGATTCCTGCACACTTGCTTTTATGAGGAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR CAA 90 bp AATCCTAGAGTCATAAACGGCTTGTTTCTAAATCACATTACTGGTATCTTGGAACTAAGCCCTTTCTGCTaGACATGGAGAAGGCATATA +
Preference number: 3 (lower is better)
Translates to: NPRVINGLFLNHITGILELSPFC*TWRRHI
Trigger: TATATGCCTTCTCCATGTCAAGCAGAAAGGGCTTAG...TTCCAAGATACCAGTAATGTGATTTAGAAACAAGCCGTTTATGACTCTAGGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR-3UTR CAA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGAAGCAAAATCAGCTTTaGCTCTTCATATTTCGTAGG +
Preference number: 3 (lower is better)
Translates to: ASSESWNSFLVCYLQKARKQNQL*LFIFRR
Trigger: CCTACGAAATATGAAGAGCAAAAGCTGATTTTGCTT...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR-3UTR CAA 90 bp AATCCTAGAGTCATAAACGGCTTGTTTCTAAATCACATTACTGGTATCTTGGAATTCCAAAAACACTTGTaGAGTGCCAACTATGTACCA +
Preference number: 3 (lower is better)
Translates to: NPRVINGLFLNHITGILEFQKHL*SANYVP
Trigger: TGGTACATAGTTGGCACTCAACAAGTGTTTTTGGAA...TTCCAAGATACCAGTAATGTGATTTAGAAACAAGCCGTTTATGACTCTAGGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR TCA 72 bp GTTAAAGTACACTTATGCCTCACTGCTTTATACTGCTaGAAAACATCTAATTTCTGTATTGCAGTGGCAGAA +
Preference number: 3 (lower is better)
Translates to: VKVHLCLTALYC*KTSNFCIAVAE
Trigger: TTCTGCCACTGCAATACAGAAATTAGATGTTTTTCAGCAGTATAAAGCAGTGAGGCATAAGTGTACTTTAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR TCA 72 bp TGTTTCATTTGGATTAACATTGCCACTCCTCCCTCCTaGCAAGGTTGTAACTTAATAATAGCATGTCTTATA +
Preference number: 3 (lower is better)
Translates to: CFIWINIATPPS*QGCNLIIACLI
Trigger: TATAAGACATGCTATTATTAAGTTACAACCTTGTCAGGAGGGAGGAGTGGCAATGTTAATCCAAATGAAACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR TCA 72 bp AAATATCACACTCCTAGTTGCTCCAAGAAGGGTTTCTaGGAAGCAATTTATGATGAATATCATTCAGGAATA +
Preference number: 3 (lower is better)
Translates to: KYHTPSCSKKGF*EAIYDEYHSGI
Trigger: TATTCCTGAATGATATTCATCATAAATTGCTTCTCAGAAACCCTTCTTGGAGCAACTAGGAGTGTGATATTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR GCA 72 bp CATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTaGAAAAAGCTAGGTGGCCTTTTTAGTATCAAATTT +
Preference number: 3 (lower is better)
Translates to: HLSLGIAFLFVI*KKLGGLFSIKF
Trigger: AAATTTGATACTAAAAAGGCCACCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGCGTCACTCTCCGCCTTaGCCGTGCTCCGCTAACCCT +
Preference number: 4 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQRHSPP*PCSANP
Trigger: AGGGTTAGCGGAGCACGGGCAAGGCGGAGAGTGACG...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357266.9
ENST00000539068.5
CDS-3UTR GCA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGCCTGGAGTGGTCCCGTaGCACCCCTCAGTGAACCCT +
Preference number: 4 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQPGVVP*HPSVNP
Trigger: AGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGG...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGCTTCCCTCCTTGGCGTaGCGTCATACGTGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQLPSLA*RHTWPS
Trigger: TGAGGGCCACGTATGACGCCACGCCAAGGAGGGAAG...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGGGACTCTTCCCTCCTTaGCGTGGCGTCATACGTGGC +
Preference number: 4 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQGLFPP*RGVIRG
Trigger: GCCACGTATGACGCCACGCCAAGGAGGGAAGAGTCC...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGCGGTCCCGCTCGTTGTaGTCCTTGGCCTTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQRSRSL*SLAFFW
Trigger: CCAGAAAAAGGCCAAGGAGCACAACGAGCGGGACCG...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGGAGCTGGACTTAAGCTaGTGGCTCACTCCCTCCACA +
Preference number: 4 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQELDLS*WLTPST
Trigger: TGTGGAGGGAGTGAGCCAGCAGCTTAAGTCCAGCTC...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGCAGAACAGAGAAGCTTaGCAGGGCAGGAAAAGCGAG +
Preference number: 4 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQQNREA*QGRKSE
Trigger: CTCGCTTTTCCTGCCCTGTCAAGCTTCTCTGTTCTG...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGCGTGAAGTGTCTTCTTaGGTGGTAATGGGCACCCTG +
Preference number: 4 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQREVSS*VVMGTL
Trigger: CAGGGTGCCCATTACCACTCAAGAAGACACTTCACG...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGGGAGATTTAGGCTACTaGCTGTGTACCGGCATGGGA +
Preference number: 4 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQGDLGY*LCTGMG
Trigger: TCCCATGCCGGTACACAGCCAGTAGCCTAAATCTCC...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCCGTGCCACCCCTCAGTaGACCCTCCGGGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLRATPQ*TLRAAA
Trigger: TGCTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACG...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGGGAGATCTGCAGTCTTaGAGCCTTATTCTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQGDLQS*SLILGV
Trigger: AACCCCCAGAATAAGGCTGCAAGACTGCAGATCTCC...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGCCAATTGGAATGTCGTaGTCTTCTCCTTCGCCCACA +
Preference number: 4 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQPIGMS*SSPSPT
Trigger: TGTGGGCGAAGGAGAAGACCACGACATTCCAATTGG...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR CAA 72 bp GCTGGCTCACTCCCTCCACACCACAGTCATTTCTGTTaGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAG +
Preference number: 4 (lower is better)
Translates to: AGSLPPHHSHFC*FHLEWSRATPQ
Trigger: CTGAGGGGTGGCACGGGACCACTCCAGGTGGAACAAACAGAAATGACTGTGGTGTGGAGGGAGTGAGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGTCTCCGCCTTGCCCGTaGTCCGCTAACCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWSPPCP*SANPSA
Trigger: GGCTGAAGGGTTAGCGGAGCACGGGCAAGGCGGAGA...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357266.9
ENST00000539068.5
CDS-3UTR CCA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGCCTTTTTCTGGCACATaGAGATCTGCAGTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQPFSGT*RSAVLQ
Trigger: CTGCAAGACTGCAGATCTCCATGTGCCAGAAAAAGG...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCCCACACCAGGCTCCCTaGGGGTCGGAGAGTCTAGCC +
Preference number: 4 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLPHQAP*GSESLA
Trigger: GGCTAGACTCTCCGACCCCCAGGGAGCCTGGTGTGG...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536438.5
CDS-3UTR CCA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAACCATCTCCGTGGCCATaGCGCCGGTACCTGTCGCCG +
Preference number: 4 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQPSPWP*RRYLSP
Trigger: CGGCGACAGGTACCGGCGCCATGGCCACGGAGATGG...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539068.5
CDS-3UTR TCA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGTCCTTCGTTTGGATTTaGATATCCCTCTCCTTTCCG +
Preference number: 4 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQSFVWI*ISLSFP
Trigger: CGGAAAGGAGAGGGATATTCAAATCCAAACGAAGGA...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGAGCCTAAAAGGTGGTTaGAAGATGTCTGTGGACTTC +
Preference number: 4 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQSLKGG*KMSVDF
Trigger: GAAGTCCACAGACATCTTTCAACCACCTTTTAGGCT...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGTCTTCCTTGGCATCCTaGTCTGCAAACTTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQSSLAS*SANFLN
Trigger: GTTCAAGAAGTTTGCAGAGCAGGATGCCAAGGAAGA...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGGGGAATAGAGAGCCATaGTCAATCTGTTTACCCGTA +
Preference number: 4 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQGNREP*SICLPV
Trigger: TACGGGTAAACAGATTGAGCATGGCTCTCTATTCCC...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCGAGAGTCTAGCCTTCTaGAGCGTGGCTGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLESLAF*SVAACP
Trigger: GGGGCAGGCAGCCACGCTGCAGAAGGCTAGACTCTC...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536438.5
CDS-3UTR CCA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGTCTCAAAGTCACCCTTaGCTGACTCAAACTCGTTCA +
Preference number: 4 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQSQSHP*LTQTRS
Trigger: TGAACGAGTTTGAGTCAGCCAAGGGTGACTTTGAGA...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGCTTCCCTCCTTGGCGTaGCGTCATACGTGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWLPSLA*RHTWPS
Trigger: TGAGGGCCACGTATGACGCCACGCCAAGGAGGGAAG...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGCGGTCCCGCTCGTTGTaGTCCTTGGCCTTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWRSRSL*SLAFFW
Trigger: CCAGAAAAAGGCCAAGGAGCACAACGAGCGGGACCG...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGAGTCTTCTTGCCCATTaGTTTATTGGCCTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQSLLAH*FIGLFL
Trigger: AAGGAAGAGGCCAATAAAGCAATGGGCAAGAAGACT...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCGGACTCTTCCCTCCTTaGCGTGGCGTCATACGTGGC +
Preference number: 4 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLGLFPP*RGVIRG
Trigger: GCCACGTATGACGCCACGCCAAGGAGGGAAGAGTCC...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGATGCAGCCTAAAAGGTaGTTGAAAGATGTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQMQPKR*LKDVCG
Trigger: TCCACAGACATCTTTCAACCACCTTTTAGGCTGCAT...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR CAA 72 bp CCACAGCCCAAGCAGCGCGTACATCTCACTGCCGAGTaGTCTCTCCCCACAAATACTCCAACCCTCACCCAA +
Preference number: 4 (lower is better)
Translates to: PQPKQRVHLTAE*SLPTNTPTLTQ
Trigger: TTGGGTGAGGGTTGGAGTATTTGTGGGGAGAGACAACTCGGCAGTGAGATGTACGCGCTGCTTGGGCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR TCA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGTGGGGGAAAGCCCATTaGGGAGGGGCCGAGTTCACT +
Preference number: 4 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGWGKAH*GGAEFT
Trigger: AGTGAACTCGGCCCCTCCTCAATGGGCTTTCCCCCA...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGAAGGTTGATAGAAACTaGAATGAGCTGGACTTAAGC +
Preference number: 4 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQKVDRN*NELDLS
Trigger: GCTTAAGTCCAGCTCATTTCAGTTTCTATCAACCTT...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCGGAACTGGGGAGACATaGGACCCCTCTACTGTGGGT +
Preference number: 4 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLGTGET*DPSTVG
Trigger: ACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCC...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGAAATTTAGGCTTCCCTaGCTCTCCAAAACCATATCT +
Preference number: 4 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQKFRLP*LSKTIS
Trigger: AGATATGGTTTTGGAGAGGCAGGGAAGCCTAAATTT...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCCGGTCCCGCTCGTTGTaGTCCTTGGCCTTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLRSRSL*SLAFFW
Trigger: CCAGAAAAAGGCCAAGGAGCACAACGAGCGGGACCG...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGTACACATTTAAGACTTaGCCTAGTTCAATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQYTFKT*PSSMVS
Trigger: GCTGACCATTGAACTAGGGCAAGTCTTAAATGTGTA...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACTGCAGCGTGGCTGCCTaGCCCTCGGGGGCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNCSVAA*PSGAPC
Trigger: GCAAGGAGCCCCCGAGGGGCAGGCAGCCACGCTGCA...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536438.5
CDS-3UTR GCA 90 bp GCAGATGGAGCATTTGGGGAGGGAATTAGGTTAGATGTGGTCATGAGGGTGGGGAGAAACTCGGGTGCTTaGTGCCCTCTGCCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: ADGAFGEGIRLDVVMRVGRNSGA*CPLPSL
Trigger: GAGAGAGGGCAGAGGGCAGCAAGCACCCGAGTTTCT...CCCCACCCTCATGACCACATCTAACCTAATTCCCTCCCCAAATGCTCCATCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CCA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGGCGTGGCGTCATACGTaGCCCTCAGGTTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWAWRHT*PSGFSS
Trigger: AGAAGAGAAACCTGAGGGCCACGTATGACGCCACGC...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGGGACTCTTCCCTCCTTaGCGTGGCGTCATACGTGGC +
Preference number: 4 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGGLFPP*RGVIRG
Trigger: GCCACGTATGACGCCACGCCAAGGAGGGAAGAGTCC...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGAGGGGCCGAGTTCACTaGGACTCTTCCCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGRGRVH*DSSLLG
Trigger: GCCAAGGAGGGAAGAGTCCCAGTGAACTCGGCCCCT...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGATCAAATTTCAATCTTaGCCTCACTGGAACCATGCT +
Preference number: 4 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQIKFQS*PHWNHA
Trigger: AGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCCGGTTCCCTTCTCTTTaGCAATGGCAGCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLRFPSL*QWQPAP
Trigger: TGGAGCAGGCTGCCATTGTCAAAGAGAAGGGAACCG...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACCGTGCCACCCCTCAGTaGACCCTCCGGGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNRATPQ*TLRAAA
Trigger: TGCTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACG...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAAGGAACTGGGGAGACATaGGACCCCTCTACTGTGGGT +
Preference number: 4 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQGTGET*DPSTVG
Trigger: ACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCC...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGGGAACTGGGGAGACATaGGACCCCTCTACTGTGGGT +
Preference number: 4 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGGTGET*DPSTVG
Trigger: ACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCC...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGCAGAACAGAGAAGCTTaGCAGGGCAGGAAAAGCGAG +
Preference number: 4 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWQNREA*QGRKSE
Trigger: CTCGCTTTTCCTGCCCTGTCAAGCTTCTCTGTTCTG...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGTTTACCCGTAAGGACTaGAATTCAACTACATGTACA +
Preference number: 4 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQFTRKD*NSTTCT
Trigger: TGTACATGTAGTTGAATTTCAGTCCTTACGGGTAAA...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp GCTCCTGTCCTGCAGAACACTGTCAGCTATGAGGGCAAAAATCGTGTCTGTTTACGTCACTCTCCGCCTTaGCCGTGCTCCGCTAACCCT +
Preference number: 4 (lower is better)
Translates to: APVLQNTVSYEGKNRVCLRHSPP*PCSANP
Trigger: AGGGTTAGCGGAGCACGGGCAAGGCGGAGAGTGACG...TAAACAGACACGATTTTTGCCCTCATAGCTGACAGTGTTCTGCAGGACAGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR GCA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCCCTGGAGTGGTCCCGTaGCACCCCTCAGTGAACCCT +
Preference number: 4 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTPGVVP*HPSVNP
Trigger: AGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGG...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGGGAAAAGCGAGCAACTaGGTGTCAAACCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWGKASN*VSNLQV
Trigger: CACCTGCAGGTTTGACACGCAGTTGCTCGCTTTTCC...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGTTCTTGTTTGTTATCTaGAAAAAGCTAGGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQFLFVI*KKLGGL
Trigger: AAGGCCACCTAGCTTTTTGCAGATAACAAACAAGAA...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp GCAGATGGAGCATTTGGGGAGGGAATTAGGTTAGATGTGGTCATGAGGGTGGGGAAGAAGAAACTCGGGTaGTTGCTGCCCTCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: ADGAFGEGIRLDVVMRVGKKKLG*LLPSAL
Trigger: GAGGGCAGAGGGCAGCAAGCACCCGAGTTTCTTCTT...CCCCACCCTCATGACCACATCTAACCTAATTCCCTCCCCAAATGCTCCATCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CCA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGCAGCGGCCTTCCAGGTaGATTTCTACTGTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWQRPSR*ISTVAP
Trigger: AGGAGCAACAGTAGAAATCCACCTGGAAGGCCGCTG...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGGCTCGTTGTGCTCCTTaGCCTTTTTCTGGCACATGG +
Preference number: 4 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWARCAP*PFSGTW
Trigger: CCATGTGCCAGAAAAAGGCCAAGGAGCACAACGAGC...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGTACTGTGGGTTCTGTTaGTTAAAAATGCAACAGACT +
Preference number: 4 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQYCGFC*LKMQQT
Trigger: AGTCTGTTGCATTTTTAACCAACAGAACCCACAGTA...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGGGCTGTGTACCGGCATaGGAAGCTGTCTTCAACTCT +
Preference number: 4 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWGCVPA*EAVFNS
Trigger: AGAGTTGAAGACAGCTTCCCATGCCGGTACACAGCC...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR CAA 72 bp CTGGAAAGACAAGGCCCGGGAGGGCAGTATGGCAGATaGAAACCTGCCCTGAGTTGGGAAGGGAATATGTAC +
Preference number: 4 (lower is better)
Translates to: LERQGPGGQYGR*KPALSWEGNMY
Trigger: GTACATATTCCCTTCCCAACTCAGGGCAGGTTTCAATCTGCCATACTGCCCTCCCGGGCCTTGTCTTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR TCA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAACGGTTCCCTTCTCTTTaGCAATGGCAGCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQRFPSL*QWQPAP
Trigger: TGGAGCAGGCTGCCATTGTCAAAGAGAAGGGAACCG...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGTGGCTTTCACGTCTGTaGCACTGCTGTGGAACTGGG +
Preference number: 4 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGWLSRL*HCCGTG
Trigger: CCCAGTTCCACAGCAGTGTCACAGACGTGAAAGCCA...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAACAAGCAAGTGGCCTCTaGGGTTCTGGCTTTCACGTC +
Preference number: 4 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQQASGL*GSGFHV
Trigger: GACGTGAAAGCCAGAACCTCAGAGGCCACTTGCTTG...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGGAGTGTTTCTTAGGCTaGGGGAATAGAGAGCCATGC +
Preference number: 4 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWECFLG*GNREPC
Trigger: GCATGGCTCTCTATTCCCTCAGCCTAAGAAACACTC...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCCGTGAAGTGTCTTCTTaGGTGGTAATGGGCACCCTG +
Preference number: 4 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLREVSS*VVMGTL
Trigger: CAGGGTGCCCATTACCACTCAAGAAGACACTTCACG...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATATCTCCGCCTTGCCCGTaGTCCGCTAACCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGISPPCP*SANPSA
Trigger: GGCTGAAGGGTTAGCGGAGCACGGGCAAGGCGGAGA...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357266.9
ENST00000539068.5
CDS-3UTR GCA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGGTAATATCCTCTCCCTaGTCAGCAACAGTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWVISSP*SATVAV
Trigger: CACAGCCACTGTTGCTGAGCAGGGAGAGGATATTAC...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATACCTGGAGTGGTCCCGTaGCACCCCTCAGTGAACCCT +
Preference number: 4 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGIPGVVP*HPSVNP
Trigger: AGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGG...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAAGAGCTGGACTTAAGCTaGTGGCTCACTCCCTCCACA +
Preference number: 4 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQELDLS*WLTPST
Trigger: TGTGGAGGGAGTGAGCCAGCAGCTTAAGTCCAGCTC...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCTCGTTCATGAGCAGCTaGGCTTCACCCCTCCTATAC +
Preference number: 4 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLSFMSS*ASPLLY
Trigger: GTATAGGAGGGGTGAAGCCCAGCTGCTCATGAACGA...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGGCGTGGCGTCATACGTaGCCCTCAGGTTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGAWRHT*PSGFSS
Trigger: AGAAGAGAAACCTGAGGGCCACGTATGACGCCACGC...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCAGGGGCCGAGTTCACTaGGACTCTTCCCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTRGRVH*DSSLLG
Trigger: GCCAAGGAGGGAAGAGTCCCAGTGAACTCGGCCCCT...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCTTGTTCCACCTGGAGTaGTCCCGTGCCACCCCTCAG +
Preference number: 4 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTLFHLE*SRATPQ
Trigger: CTGAGGGGTGGCACGGGACCACTCCAGGTGGAACAA...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCGGAGATTTAGGCTACTaGCTGTGTACCGGCATGGGA +
Preference number: 4 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLGDLGY*LCTGMG
Trigger: TCCCATGCCGGTACACAGCCAGTAGCCTAAATCTCC...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGGTTGAAAGATGTCTGTaGACTTCTACACAAATTGTT +
Preference number: 4 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQVERCL*TSTQIV
Trigger: AACAATTTGTGTAGAAGTCCACAGACATCTTTCAAC...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGAGGAATTTCCCCCTCTaGGACGCCTCGGAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGRNFPL*DASEGL
Trigger: AAGACCTTCCGAGGCGTCCCAGAGGGGGAAATTCCT...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536438.5
CDS-3UTR CCA 90 bp AGGAATATCCGGAGATTCCTCATAAAAGCAAGTGTGCAGGAATCATCTTGGCCAGCTGGGGACTACAGGTaGCCGCCACCAAGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: RNIRRFLIKASVQESSWPAGDYR*PPPSPA
Trigger: AGCTGGGCTTGGTGGCGGCCACCTGTAGTCCCCAGC...TGGCCAAGATGATTCCTGCACACTTGCTTTTATGAGGAATCTCCGGATATTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR TCA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGATTAGTGACCCCTTCTaGAGTCTTCTTGCCCATTGC +
Preference number: 4 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWISDPF*SLLAHC
Trigger: GCAATGGGCAAGAAGACTTCAGAAGGGGTCACTAAT...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCAACACTGTTCTGTCCTaGGTTGGGGGAAAGCCCATT +
Preference number: 4 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLNTVLS*VGGKPI
Trigger: AATGGGCTTTCCCCCAACTCAGGACAGAACAGTGTT...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCGAGTGTTTCTTAGGCTaGGGGAATAGAGAGCCATGC +
Preference number: 4 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLECFLG*GNREPC
Trigger: GCATGGCTCTCTATTCCCTCAGCCTAAGAAACACTC...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGCCAAATGCATTCCCATaGGTGTTTCTTAGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWPNAFP*VFLRLR
Trigger: CCTCAGCCTAAGAAACACTCATGGGAATGCATTTGG...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGCGTGAAGTGTCTTCTTaGGTGGTAATGGGCACCCTG +
Preference number: 4 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGREVSS*VVMGTL
Trigger: CAGGGTGCCCATTACCACTCAAGAAGACACTTCACG...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCTGCCCAAAGAGAATGTaGGGTCCTCAAGGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTCPKRM*GPQGWA
Trigger: CGCCCACCCTTGAGGACCTCACATTCTCTTTGGGCA...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536438.5
CDS-3UTR TCA 90 bp GCAGATGGAGCATTTGGGGAGGGAATTAGGTTAGATGTGGTCATGAGGGTGGGGAACACTGACCAGGTGTaGGTTAATGCTCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: ADGAFGEGIRLDVVMRVGNTDQV*VNAPVL
Trigger: CAGGACAGGAGCATTAACTCACACCTGGTCAGTGTT...CCCCACCCTCATGACCACATCTAACCTAATTCCCTCCCCAAATGCTCCATCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR GCA 90 bp AGGAATATCCGGAGATTCCTCATAAAAGCAAGTGTGCAGGAATCATCTTGGCCATCTCCGCCTTGCCCGTaGTCCGCTAACCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: RNIRRFLIKASVQESSWPSPPCP*SANPSA
Trigger: GGCTGAAGGGTTAGCGGAGCACGGGCAAGGCGGAGA...TGGCCAAGATGATTCCTGCACACTTGCTTTTATGAGGAATCTCCGGATATTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR GCA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGTTCGCCCACAGTGAATaGCACATCTCTGCAGTCAAA +
Preference number: 4 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWFAHSE*HISAVK
Trigger: TTTGACTGCAGAGATGTGGCATTCACTGTGGGCGAA...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGGGAAAAGCGAGCAACTaGGTGTCAAACCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGGKASN*VSNLQV
Trigger: CACCTGCAGGTTTGACACGCAGTTGCTCGCTTTTCC...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGCTTCTGCAGCGTGGCTaGCTGCCCCTCGGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: ASSESWNSFLVCYLQKARLLQRG*LPLGGS
Trigger: GGAGCCCCCGAGGGGCAGGCAGCCACGCTGCAGAAG...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000536438.5
CDS-3UTR GCA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACGAAGCGTTCTGTCCCTaGAGCCCACACCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNEAFCP*SPHQAP
Trigger: GGGAGCCTGGTGTGGGCTGCAGGGACAGAACGCTTC...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536438.5
CDS-3UTR GCA 90 bp GCTCCTGTCCTGCAGAACACTGTCAGCTATGAGGGCAAAAATCGTGTCTGTTTAGCGCGTACATCTCACTaGCGAGTTGTCTCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: APVLQNTVSYEGKNRVCLARTSH*RVVSPH
Trigger: GTGGGGAGAGACAACTCGGCAGTGAGATGTACGCGC...TAAACAGACACGATTTTTGCCCTCATAGCTGACAGTGTTCTGCAGGACAGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR GCA 90 bp GCAGATGGAGCATTTGGGGAGGGAATTAGGTTAGATGTGGTCATGAGGGTGGGGACAGATGATACATCCTaGCAGATGGCAGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: ADGAFGEGIRLDVVMRVGTDDTS*QMAEEQ
Trigger: CTGCTCCTCTGCCATCTGGCAGGATGTATCATCTGT...CCCCACCCTCATGACCACATCTAACCTAATTCCCTCCCCAAATGCTCCATCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR GCA 90 bp GCTCCTGTCCTGCAGAACACTGTCAGCTATGAGGGCAAAAATCGTGTCTGTTTATCTCCAGGGCTGGAGTaGAATGGCGCCATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: APVLQNTVSYEGKNRVCLSPGLE*NGAISA
Trigger: AGCTGAGATGGCGCCATTGCACTCCAGCCCTGGAGA...TAAACAGACACGATTTTTGCCCTCATAGCTGACAGTGTTCTGCAGGACAGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CCA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCCCAATTGGAATGTCGTaGTCTTCTCCTTCGCCCACA +
Preference number: 4 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLPIGMS*SSPSPT
Trigger: TGTGGGCGAAGGAGAAGACCACGACATTCCAATTGG...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAATCGTTCATGAGCAGCTaGGCTTCACCCCTCCTATAC +
Preference number: 4 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQSFMSS*ASPLLY
Trigger: GTATAGGAGGGGTGAAGCCCAGCTGCTCATGAACGA...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAAGGCTGTGTACCGGCATaGGAAGCTGTCTTCAACTCT +
Preference number: 4 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQGCVPA*EAVFNS
Trigger: AGAGTTGAAGACAGCTTCCCATGCCGGTACACAGCC...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAAGGAGATTTAGGCTACTaGCTGTGTACCGGCATGGGA +
Preference number: 4 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQGDLGY*LCTGMG
Trigger: TCCCATGCCGGTACACAGCCAGTAGCCTAAATCTCC...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGGGTCAGCTCAAGTACTaGAGATTTAGGCTACTGGCT +
Preference number: 4 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWGQLKY*RFRLLA
Trigger: AGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACC...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGCTTGCCCTAGTTCAATaGTCAGCTCAAGTACTGGAG +
Preference number: 4 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWLALVQ*SAQVLE
Trigger: CTCCAGTACTTGAGCTGACCATTGAACTAGGGCAAG...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGTTGCACACACAGGGCTaGGGATTGTCGCTTCGTAGT +
Preference number: 4 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGLHTQG*GLSLRS
Trigger: ACTACGAAGCGACAATCCCCAGCCCTGTGTGTGCAA...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536438.5
CDS-3UTR CCA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGGCCGCCCCATCTCCGTaGCCATGGCGCCGGTACCTG +
Preference number: 4 (lower is better)
Translates to: ASSESWNSFLVCYLQKARAAPSP*PWRRYL
Trigger: CAGGTACCGGCGCCATGGCCACGGAGATGGGGCGGC...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539068.5
CDS-3UTR TCA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCACTCAAACTCGTTCATaGGCAGCTGGGCTTCACCCC +
Preference number: 4 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTTQTRS*AAGLHP
Trigger: GGGGTGAAGCCCAGCTGCTCATGAACGAGTTTGAGT...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCAAAGTCACCCTTGGCTaGCTCAAACTCGTTCATGAG +
Preference number: 4 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLKVTLG*LKLVHE
Trigger: CTCATGAACGAGTTTGAGTCAGCCAAGGGTGACTTT...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGGCTCTGCAAACTTCTTaGACATGTTGGCGTATATCC +
Preference number: 4 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWALQTS*TCWRIS
Trigger: GGATATACGCCAACATGTTCAAGAAGTTTGCAGAGC...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGAATGAAAGAAGAAGCTaGGCAGTAGCAATGCTGGGA +
Preference number: 4 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWNERRS*AVAMLG
Trigger: TCCCAGCATTGCTACTGCTCAGCTTCTTCTTTCATT...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCCCAAATGCATTCCCATaGGTGTTTCTTAGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLPNAFP*VFLRLR
Trigger: CCTCAGCCTAAGAAACACTCATGGGAATGCATTTGG...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp GCAGATGGAGCATTTGGGGAGGGAATTAGGTTAGATGTGGTCATGAGGGTGGGGAGGACTTCAAGTGGGTaGTGTAAGAAACGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: ADGAFGEGIRLDVVMRVGRTSSG*CKKRAL
Trigger: CAGAGCTCGTTTCTTACATCACCCACTTGAAGTCCT...CCCCACCCTCATGACCACATCTAACCTAATTCCCTCCCCAAATGCTCCATCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR GCA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAAGTAATATCCTCTCCCTaGTCAGCAACAGTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQVISSP*SATVAV
Trigger: CACAGCCACTGTTGCTGAGCAGGGAGAGGATATTAC...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAAGCCAGCCGAGCCATATaGATATTCTGGTTTGCACAG +
Preference number: 4 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQASRAI*IFWFAQ
Trigger: CTGTGCAAACCAGAATATGCATATGGCTCGGCTGGC...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGGGAGATCTGCAGTCTTaGAGCCTTATTCTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGGDLQS*SLILGV
Trigger: AACCCCCAGAATAAGGCTGCAAGACTGCAGATCTCC...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCTGTTGGCGTATATCCTaGGGTCCCGCTCGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTCWRIS*GPARCA
Trigger: AGCACAACGAGCGGGACCGCAGGATATACGCCAACA...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp GCAGATGGAGCATTTGGGGAGGGAATTAGGTTAGATGTGGTCATGAGGGTGGGGCATAACTGGGTAGGATaGTACTGGCATCTAATGGGC +
Preference number: 4 (lower is better)
Translates to: ADGAFGEGIRLDVVMRVGHNWVG*YWHLMG
Trigger: GCCCATTAGATGCCAGTAGCATCCTACCCAGTTATG...CCCCACCCTCATGACCACATCTAACCTAATTCCCTCCCCAAATGCTCCATCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR GCA 90 bp GGCAGATTGAAACCTGCCCTGAGTTGGGAAGGGAATATGTACAGGAAACTATCTTTCCAGCGATTCTCCTaGCTCAGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: GRLKPALSWEGNMYRKLSFQRFS*LSLPSS
Trigger: GCTACTCGGGAGGCTGAGGCAGGAGAATCGCTGGAA...AGATAGTTTCCTGTACATATTCCCTTCCCAACTCAGGGCAGGTTTCAATCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CCA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGTCTCAAAGTCACCCTTaGCTGACTCAAACTCGTTCA +
Preference number: 4 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWSQSHP*LTQTRS
Trigger: TGAACGAGTTTGAGTCAGCCAAGGGTGACTTTGAGA...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCTATTGGCCTCTTCCTTaGCATCCTGCTCTGCAAACT +
Preference number: 4 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLYWPLP*HPALQT
Trigger: AGTTTGCAGAGCAGGATGCCAAGGAAGAGGCCAATA...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGCCTCATATGCTGACTTaGCAATCCATATGCAGCCTA +
Preference number: 4 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWPHMLT*QSICSL
Trigger: TAGGCTGCATATGGATTGCCAAGTCAGCATATGAGG...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCCGCCTCGGAAGGTCTTaGCATGGGGGATGTAACTCT +
Preference number: 4 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTRLGRS*HGGCNS
Trigger: AGAGTTACATCCCCCATGCCAAGACCTTCCGAGGCG...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536438.5
CDS-3UTR CCA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATAGTCCCTGTCTCTGTCTaGCTTCCGCTCTGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGIVPVSV*LPLCPK
Trigger: CTTTGGGCAGAGCGGAAGCCAGACAGAGACAGGGAC...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536438.5
CDS-3UTR CCA 90 bp GGCAGATTGAAACCTGCCCTGAGTTGGGAAGGGAATATGTACAGGAAACTATCTCCCGGGAGGGCAGTATaGCAGATTGAAACCTGCCCT +
Preference number: 4 (lower is better)
Translates to: GRLKPALSWEGNMYRKLSPGRAV*QIETCP
Trigger: AGGGCAGGTTTCAATCTGCCATACTGCCCTCCCGGG...AGATAGTTTCCTGTACATATTCCCTTCCCAACTCAGGGCAGGTTTCAATCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CCA 90 bp GCAGATGGAGCATTTGGGGAGGGAATTAGGTTAGATGTGGTCATGAGGGTGGGGCCACTCACATGCATGTaGAAAGGCCATGTGAGAACA +
Preference number: 4 (lower is better)
Translates to: ADGAFGEGIRLDVVMRVGPLTCM*KGHVRT
Trigger: TGTTCTCACATGGCCTTTCCACATGCATGTGAGTGG...CCCCACCCTCATGACCACATCTAACCTAATTCCCTCCCCAAATGCTCCATCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CCA 90 bp GGCAGATTGAAACCTGCCCTGAGTTGGGAAGGGAATATGTACAGGAAACTATCTCACTGTCTCCAGGGCTaGAGTGCAATGGCGCCATCT +
Preference number: 4 (lower is better)
Translates to: GRLKPALSWEGNMYRKLSHCLQG*SAMAPS
Trigger: AGATGGCGCCATTGCACTCCAGCCCTGGAGACAGTG...AGATAGTTTCCTGTACATATTCCCTTCCCAACTCAGGGCAGGTTTCAATCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR TCA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGCATTCCCCACTCTTTTaGCAATCTTTAATACTCCCC +
Preference number: 4 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWHSPLF*QSLILP
Trigger: GGGGAGTATTAAAGATTGTCAAAAGAGTGGGGAATG...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCTCCTTCGTTTGGATTTaGATATCCCTCTCCTTTCCG +
Preference number: 4 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLSFVWI*ISLSFP
Trigger: CGGAAAGGAGAGGGATATTCAAATCCAAACGAAGGA...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp GGCAGATTGAAACCTGCCCTGAGTTGGGAAGGGAATATGTACAGGAAACTATCTCGGTTCCCTTCTCTTTaGCAATGGCAGCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GRLKPALSWEGNMYRKLSRFPSL*QWQPAP
Trigger: TGGAGCAGGCTGCCATTGTCAAAGAGAAGGGAACCG...AGATAGTTTCCTGTACATATTCCCTTCCCAACTCAGGGCAGGTTTCAATCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR TCA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCACTATCTTCCCATACTaGATCACCGCCTGCATGTAT +
Preference number: 4 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLTIFPY*ITACMY
Trigger: ATACATGCAGGCGGTGATTCAGTATGGGAAGATAGT...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATAACTCAAACTCGTTCATaGGCAGCTGGGCTTCACCCC +
Preference number: 4 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGITQTRS*AAGLHP
Trigger: GGGGTGAAGCCCAGCTGCTCATGAACGAGTTTGAGT...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAAAAAGTCACCCTTGGCTaGCTCAAACTCGTTCATGAG +
Preference number: 4 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQKVTLG*LKLVHE
Trigger: CTCATGAACGAGTTTGAGTCAGCCAAGGGTGACTTT...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCAGCCTAAAAGGTGGTTaGAAGATGTCTGTGGACTTC +
Preference number: 4 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLSLKGG*KMSVDF
Trigger: GAAGTCCACAGACATCTTTCAACCACCTTTTAGGCT...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCCATTGTTCTTCCCGCTaGATTTTCTCCAGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLHCSSR*IFSRAL
Trigger: CAAAGCTCTGGAGAAAATGCAGCGGGAAGAACAATG...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAATGGCACATGGAGATCTaGAGTCTTGCAGCCTTATTC +
Preference number: 4 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQWHMEI*SLAALF
Trigger: GAATAAGGCTGCAAGACTGCAGATCTCCATGTGCCA...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGCTTGGCATCCTGCTCTaGAAACTTCTTGAACATGTT +
Preference number: 4 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWLGILL*KLLEHV
Trigger: AACATGTTCAAGAAGTTTGCAGAGCAGGATGCCAAG...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGGGAAGCTACTGGTTTTaGCATTTGCTTCCAGAATCA +
Preference number: 4 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWGSYWF*HLLPES
Trigger: TGATTCTGGAAGCAAATGGCAAAACCAGTAGCTTCC...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCGGGAATAGAGAGCCATaGTCAATCTGTTTACCCGTA +
Preference number: 4 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLGNREP*SICLPV
Trigger: TACGGGTAAACAGATTGAGCATGGCTCTCTATTCCC...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCCCTTGGGTTGCCAAATaGATTCCCATGAGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLPWVAK*IPMSVS
Trigger: AGAAACACTCATGGGAATGCATTTGGCAACCCAAGG...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCCACCCTGTAGTTATTTaGTCAGAACCACTCACACAC +
Preference number: 4 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLHPVVI*SEPLTH
Trigger: GTGTGTGAGTGGTTCTGAGCAAATAACTACAGGGTG...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp AGGAATATCCGGAGATTCCTCATAAAAGCAAGTGTGCAGGAATCATCTTGGCCAGTGCTTGCTGCCCTCTaGCCTCTCTCCACTCACATG +
Preference number: 4 (lower is better)
Translates to: RNIRRFLIKASVQESSWPVLAAL*PLSTHM
Trigger: CATGTGAGTGGAGAGAGGGCAGAGGGCAGCAAGCAC...TGGCCAAGATGATTCCTGCACACTTGCTTTTATGAGGAATCTCCGGATATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CCA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCCAGCGGCCTTCCAGGTaGATTTCTACTGTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTQRPSR*ISTVAP
Trigger: AGGAGCAACAGTAGAAATCCACCTGGAAGGCCGCTG...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGCTTGCAGCCTTATTCTaGGGGTTTACTTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGLAALF*GFTSST
Trigger: AGTGCTGGAAGTAAACCCCCAGAATAAGGCTGCAAG...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGTATTGGCCTCTTCCTTaGCATCCTGCTCTGCAAACT +
Preference number: 4 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGYWPLP*HPALQT
Trigger: AGTTTGCAGAGCAGGATGCCAAGGAAGAGGCCAATA...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAACTTGCCCTAGTTCAATaGTCAGCTCAAGTACTGGAG +
Preference number: 4 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQLALVQ*SAQVLE
Trigger: CTCCAGTACTTGAGCTGACCATTGAACTAGGGCAAG...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCCCTCATATGCTGACTTaGCAATCCATATGCAGCCTA +
Preference number: 4 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLPHMLT*QSICSL
Trigger: TAGGCTGCATATGGATTGCCAAGTCAGCATATGAGG...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp GGCAGATTGAAACCTGCCCTGAGTTGGGAAGGGAATATGTACAGGAAACTATCTTGGGGATGCCAGACCTaGTCTGCCTGTATGGAAGGT +
Preference number: 4 (lower is better)
Translates to: GRLKPALSWEGNMYRKLSWGCQT*SACMEG
Trigger: ACCTTCCATACAGGCAGACCAGGTCTGGCATCCCCA...AGATAGTTTCCTGTACATATTCCCTTCCCAACTCAGGGCAGGTTTCAATCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CCA 90 bp AGGAATATCCGGAGATTCCTCATAAAAGCAAGTGTGCAGGAATCATCTTGGCCACCAAGTCAGACACCCTaGAAAGACAAGGCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: RNIRRFLIKASVQESSWPPSQTP*KDKARE
Trigger: CTCCCGGGCCTTGTCTTTCCAGGGTGTCTGACTTGG...TGGCCAAGATGATTCCTGCACACTTGCTTTTATGAGGAATCTCCGGATATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CCA 90 bp GCAGATGGAGCATTTGGGGAGGGAATTAGGTTAGATGTGGTCATGAGGGTGGGGAAACAGGAGTACAAGTaGGGATTCTCCTTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: ADGAFGEGIRLDVVMRVGKQEYK*GFSFEE
Trigger: CTCCTCAAAGGAGAATCCCCACTTGTACTCCTGTTT...CCCCACCCTCATGACCACATCTAACCTAATTCCCTCCCCAAATGCTCCATCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CCA 90 bp GCTCCTGTCCTGCAGAACACTGTCAGCTATGAGGGCAAAAATCGTGTCTGTTTAGTAATCCCAGCACTTTaGAGGCCGAGACAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: APVLQNTVSYEGKNRVCLVIPAL*RPRQVD
Trigger: ATCCACCTGTCTCGGCCTCCAAAGTGCTGGGATTAC...TAAACAGACACGATTTTTGCCCTCATAGCTGACAGTGTTCTGCAGGACAGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR TCA 90 bp GCAGATGGAGCATTTGGGGAGGGAATTAGGTTAGATGTGGTCATGAGGGTGGGGCATTCCCCACTCTTTTaGCAATCTTTAATACTCCCC +
Preference number: 4 (lower is better)
Translates to: ADGAFGEGIRLDVVMRVGHSPLF*QSLILP
Trigger: GGGGAGTATTAAAGATTGTCAAAAGAGTGGGGAATG...CCCCACCCTCATGACCACATCTAACCTAATTCCCTCCCCAAATGCTCCATCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR TCA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAATCCTTCGTTTGGATTTaGATATCCCTCTCCTTTCCG +
Preference number: 4 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQSFVWI*ISLSFP
Trigger: CGGAAAGGAGAGGGATATTCAAATCCAAACGAAGGA...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAATGTATTTGCCTCCCTTaGAGTATACGGTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQCICLP*SIRFPS
Trigger: AGAAGGGAACCGTATACTTCAAGGGAGGCAAATACA...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGACTATCTTCCCATACTaGATCACCGCCTGCATGTAT +
Preference number: 4 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGTIFPY*ITACMY
Trigger: ATACATGCAGGCGGTGATTCAGTATGGGAAGATAGT...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAAGGCAGCAAGGAGAAATaGTTCAGAAGCTTTCGATTC +
Preference number: 4 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQGSKEK*FRSFRF
Trigger: GAATCGAAAGCTTCTGAATCATTTCTCCTTGCTGCC...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACACTCAAACTCGTTCATaGGCAGCTGGGCTTCACCCC +
Preference number: 4 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNTQTRS*AAGLHP
Trigger: GGGGTGAAGCCCAGCTGCTCATGAACGAGTTTGAGT...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGAAGGTTGATAGAAACTaGAATGAGCTGGACTTAAGC +
Preference number: 4 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWKVDRN*NELDLS
Trigger: GCTTAAGTCCAGCTCATTTCAGTTTCTATCAACCTT...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACTGGCTTTCACGTCTGTaGCACTGCTGTGGAACTGGG +
Preference number: 4 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNWLSRL*HCCGTG
Trigger: CCCAGTTCCACAGCAGTGTCACAGACGTGAAAGCCA...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAAAATGAAAGAAGAAGCTaGGCAGTAGCAATGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQNERRS*AVAMLG
Trigger: TCCCAGCATTGCTACTGCTCAGCTTCTTCTTTCATT...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCCACCCCAATGTCCCATaGCTTGATGACTTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTHPNVP*LDDLAF
Trigger: AAAGGCCAAGTCATCAAGGCATGGGACATTGGGGTG...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGCCAGCCGAGCCATATaGATATTCTGGTTTGCACAG +
Preference number: 4 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTASRAI*IFWFAQ
Trigger: CTGTGCAAACCAGAATATGCATATGGCTCGGCTGGC...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp GCTCCTGTCCTGCAGAACACTGTCAGCTATGAGGGCAAAAATCGTGTCTGTTTAGCCAGCCGAGCCATATaGATATTCTGGTTTGCACAG +
Preference number: 4 (lower is better)
Translates to: APVLQNTVSYEGKNRVCLASRAI*IFWFAQ
Trigger: CTGTGCAAACCAGAATATGCATATGGCTCGGCTGGC...TAAACAGACACGATTTTTGCCCTCATAGCTGACAGTGTTCTGCAGGACAGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR GCA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGCATTGTTCTTCCCGCTaGATTTTCTCCAGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGHCSSR*IFSRAL
Trigger: CAAAGCTCTGGAGAAAATGCAGCGGGAAGAACAATG...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGAAATTTAGGCTTCCCTaGCTCTCCAAAACCATATCT +
Preference number: 4 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWKFRLP*LSKTIS
Trigger: AGATATGGTTTTGGAGAGGCAGGGAAGCCTAAATTT...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACTGTTGGCGTATATCCTaGGGTCCCGCTCGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNCWRIS*GPARCA
Trigger: AGCACAACGAGCGGGACCGCAGGATATACGCCAACA...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAATCTTCCTTGGCATCCTaGTCTGCAAACTTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQSSLAS*SANFLN
Trigger: GTTCAAGAAGTTTGCAGAGCAGGATGCCAAGGAAGA...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGACTGGTTTTGCCATTTaGTTCCAGAATCACATAGAC +
Preference number: 4 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWTGFAI*FQNHID
Trigger: GTCTATGTGATTCTGGAAGCAAATGGCAAAACCAGT...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACGAGCTGGACTTAAGCTaGTGGCTCACTCCCTCCACA +
Preference number: 4 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNELDLS*WLTPST
Trigger: TGTGGAGGGAGTGAGCCAGCAGCTTAAGTCCAGCTC...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGCCAGAAACTCTCATCTaGTCATTATCATTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWPETLI*SLSLLK
Trigger: CTTCAGCAATGATAATGAGCAGATGAGAGTTTCTGG...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp GCTCCTGTCCTGCAGAACACTGTCAGCTATGAGGGCAAAAATCGTGTCTGTTTACTGAGGCAGGAGAACTaGTTGAACCTAAGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: APVLQNTVSYEGKNRVCLLRQEN*LNLRGR
Trigger: TCTGCCTCTTAGGTTCAAGCAGTTCTCCTGCCTCAG...TAAACAGACACGATTTTTGCCCTCATAGCTGACAGTGTTCTGCAGGACAGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CCA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAACATGCCTTGATGACTTaGCCTTTGCCAAGACTAAAG +
Preference number: 4 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQHALMT*PLPRLK
Trigger: CTTTAGTCTTGGCAAAGGCCAAGTCATCAAGGCATG...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCCCAATTGGAATGTCGTaGTCTTCTCCTTCGCCCACA +
Preference number: 4 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTPIGMS*SSPSPT
Trigger: TGTGGGCGAAGGAGAAGACCACGACATTCCAATTGG...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATATCGTTCATGAGCAGCTaGGCTTCACCCCTCCTATAC +
Preference number: 4 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGISFMSS*ASPLLY
Trigger: GTATAGGAGGGGTGAAGCCCAGCTGCTCATGAACGA...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCAAGTCAGCAAGCAAGTaGCCTCTGAGGTTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTKSASK*PLRFWL
Trigger: AAGCCAGAACCTCAGAGGCCACTTGCTTGCTGACTT...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATAGGCTGTGTACCGGCATaGGAAGCTGTCTTCAACTCT +
Preference number: 4 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGIGCVPA*EAVFNS
Trigger: AGAGTTGAAGACAGCTTCCCATGCCGGTACACAGCC...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAAAAGCAAATGGTTCCTTaGGTTGCCAAATGCATTCCC +
Preference number: 4 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQKQMVP*VAKCIP
Trigger: GGGAATGCATTTGGCAACCCAAGGAACCATTTGCTT...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAACCTCATATGCTGACTTaGCAATCCATATGCAGCCTA +
Preference number: 4 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQPHMLT*QSICSL
Trigger: TAGGCTGCATATGGATTGCCAAGTCAGCATATGAGG...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp GGCAGATTGAAACCTGCCCTGAGTTGGGAAGGGAATATGTACAGGAAACTATCTTCATATGAGAAACGCTaGGGGCTGAGCACAGTGGCT +
Preference number: 4 (lower is better)
Translates to: GRLKPALSWEGNMYRKLSSYEKR*GLSTVA
Trigger: AGCCACTGTGCTCAGCCCCCAGCGTTTCTCATATGA...AGATAGTTTCCTGTACATATTCCCTTCCCAACTCAGGGCAGGTTTCAATCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR TCA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGCATTCCCCACTCTTTTaGCAATCTTTAATACTCCCC +
Preference number: 4 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGHSPLF*QSLILP
Trigger: GGGGAGTATTAAAGATTGTCAAAAGAGTGGGGAATG...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCATTAGTGACCCCTTCTaGAGTCTTCTTGCCCATTGC +
Preference number: 4 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTISDPF*SLLAHC
Trigger: GCAATGGGCAAGAAGACTTCAGAAGGGGTCACTAAT...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATACCCACATTGTTAGGATaGTCTCCAGGGACCCTGAAT +
Preference number: 4 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGIPTLLG*SPGTLN
Trigger: ATTCAGGGTCCCTGGAGATCATCCTAACAATGTGGG...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGTTTACCCGTAAGGACTaGAATTCAACTACATGTACA +
Preference number: 4 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWFTRKD*NSTTCT
Trigger: TGTACATGTAGTTGAATTTCAGTCCTTACGGGTAAA...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATAGAGTGTTTCTTAGGCTaGGGGAATAGAGAGCCATGC +
Preference number: 4 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGIECFLG*GNREPC
Trigger: GCATGGCTCTCTATTCCCTCAGCCTAAGAAACACTC...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp GCTCCTGTCCTGCAGAACACTGTCAGCTATGAGGGCAAAAATCGTGTCTGTTTAGCCACTCCTCCCTCCTaGCAAGGTTGTAACTTAATA +
Preference number: 4 (lower is better)
Translates to: APVLQNTVSYEGKNRVCLATPPS*QGCNLI
Trigger: TATTAAGTTACAACCTTGTCAGGAGGGAGGAGTGGC...TAAACAGACACGATTTTTGCCCTCATAGCTGACAGTGTTCTGCAGGACAGGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR TCA 90 bp GCTCCTGTCCTGCAGAACACTGTCAGCTATGAGGGCAAAAATCGTGTCTGTTTAGAACACTGTCAGCTATaGGGGCAAAAATCGTGTCTG +
Preference number: 4 (lower is better)
Translates to: APVLQNTVSYEGKNRVCLEHCQL*GQKSCL
Trigger: CAGACACGATTTTTGCCCTCATAGCTGACAGTGTTC...TAAACAGACACGATTTTTGCCCTCATAGCTGACAGTGTTCTGCAGGACAGGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR GCA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATACACCCCAATGTCCCATaGCTTGATGACTTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGIHPNVP*LDDLAF
Trigger: AAAGGCCAAGTCATCAAGGCATGGGACATTGGGGTG...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp GGCAGATTGAAACCTGCCCTGAGTTGGGAAGGGAATATGTACAGGAAACTATCTCACCCCAATGTCCCATaGCTTGATGACTTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: GRLKPALSWEGNMYRKLSHPNVP*LDDLAF
Trigger: AAAGGCCAAGTCATCAAGGCATGGGACATTGGGGTG...AGATAGTTTCCTGTACATATTCCCTTCCCAACTCAGGGCAGGTTTCAATCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR GCA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCAAATTTAGGCTTCCCTaGCTCTCCAAAACCATATCT +
Preference number: 4 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLKFRLP*LSKTIS
Trigger: AGATATGGTTTTGGAGAGGCAGGGAAGCCTAAATTT...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATAGGAGATCTGCAGTCTTaGAGCCTTATTCTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGIGDLQS*SLILGV
Trigger: AACCCCCAGAATAAGGCTGCAAGACTGCAGATCTCC...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGCTTGGCATCCTGCTCTaGAAACTTCTTGAACATGTT +
Preference number: 4 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGLGILL*KLLEHV
Trigger: AACATGTTCAAGAAGTTTGCAGAGCAGGATGCCAAG...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAACTTGGCATCCTGCTCTaGAAACTTCTTGAACATGTT +
Preference number: 4 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQLGILL*KLLEHV
Trigger: AACATGTTCAAGAAGTTTGCAGAGCAGGATGCCAAG...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAACTTCTGAAGTCTTCTTaGCCATTGCTTTATTGGCCT +
Preference number: 4 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQLLKSS*PLLYWP
Trigger: AGGCCAATAAAGCAATGGGCAAGAAGACTTCAGAAG...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAAGGAAGCTACTGGTTTTaGCATTTGCTTCCAGAATCA +
Preference number: 4 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQGSYWF*HLLPES
Trigger: TGATTCTGGAAGCAAATGGCAAAACCAGTAGCTTCC...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACGGAAAAGCGAGCAACTaGGTGTCAAACCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNGKASN*VSNLQV
Trigger: CACCTGCAGGTTTGACACGCAGTTGCTCGCTTTTCC...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGTTCTTGTTTGTTATCTaGAAAAAGCTAGGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWFLFVI*KKLGGL
Trigger: AAGGCCACCTAGCTTTTTGCAGATAACAAACAAGAA...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp GGCAGATTGAAACCTGCCCTGAGTTGGGAAGGGAATATGTACAGGAAACTATCTCACTGCCTTTTCTCTTaGTGGTCTTTGAGGACAGGC +
Preference number: 4 (lower is better)
Translates to: GRLKPALSWEGNMYRKLSHCLFS*WSLRTG
Trigger: GCCTGTCCTCAAAGACCAGCAAGAGAAAAGGCAGTG...AGATAGTTTCCTGTACATATTCCCTTCCCAACTCAGGGCAGGTTTCAATCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CCA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCGGTTTGCACAGTAAATaGCATATCTCTCCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLGLHSK*HISPFF
Trigger: GAAGAAAGGAGAGATATGCCATTTACTGTGCAAACC...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp GGCAGATTGAAACCTGCCCTGAGTTGGGAAGGGAATATGTACAGGAAACTATCTCCAATTGGAATGTCGTaGTCTTCTCCTTCGCCCACA +
Preference number: 4 (lower is better)
Translates to: GRLKPALSWEGNMYRKLSPIGMS*SSPSPT
Trigger: TGTGGGCGAAGGAGAAGACCACGACATTCCAATTGG...AGATAGTTTCCTGTACATATTCCCTTCCCAACTCAGGGCAGGTTTCAATCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CCA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACGCTCGTTGTGCTCCTTaGCCTTTTTCTGGCACATGG +
Preference number: 4 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNARCAP*PFSGTW
Trigger: CCATGTGCCAGAAAAAGGCCAAGGAGCACAACGAGC...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATAAAGTCAGCAAGCAAGTaGCCTCTGAGGTTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGIKSASK*PLRFWL
Trigger: AAGCCAGAACCTCAGAGGCCACTTGCTTGCTGACTT...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGGCATCATCTGAGTCTTaGAATAGCTTTCTTGTTTGT +
Preference number: 4 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWASSES*NSFLVC
Trigger: ACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp GCTCCTGTCCTGCAGAACACTGTCAGCTATGAGGGCAAAAATCGTGTCTGTTTAGAGAAGGCATATATTTaGGGTGGGGAAGCAATGGGT +
Preference number: 4 (lower is better)
Translates to: APVLQNTVSYEGKNRVCLEKAYI*GGEAMG
Trigger: ACCCATTGCTTCCCCACCCCAAATATATGCCTTCTC...TAAACAGACACGATTTTTGCCCTCATAGCTGACAGTGTTCTGCAGGACAGGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CCA 90 bp AGGAATGTAAATATGGAATCAAGACTTTTTCTAAAGTGGTGTGGTGGCTCACGCCCCCCAGGGAACACCTaGCAGGTCTGGAGGCATTTT +
Preference number: 4 (lower is better)
Translates to: RNVNMESRLFLKWCGGSRPPGNT*QVWRHF
Trigger: AAAATGCCTCCAGACCTGCCAGGTGTTCCCTGGGGG...GCGTGAGCCACCACACCACTTTAGAAAAAGTCTTGATTCCATATTTACATTCCT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CCA 90 bp GGCAGATTGAAACCTGCCCTGAGTTGGGAAGGGAATATGTACAGGAAACTATCTTCTAAAGTGGTGTGGTaGCTCACGCCTATAGTCCCA +
Preference number: 4 (lower is better)
Translates to: GRLKPALSWEGNMYRKLSSKVVW*LTPIVP
Trigger: TGGGACTATAGGCGTGAGCCACCACACCACTTTAGA...AGATAGTTTCCTGTACATATTCCCTTCCCAACTCAGGGCAGGTTTCAATCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CCA 90 bp GCAGATGGAGCATTTGGGGAGGGAATTAGGTTAGATGTGGTCATGAGGGTGGGGCAGTATGTAAATCAATaGGTGCAGCTGTGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: ADGAFGEGIRLDVVMRVGQYVNQ*VQLCFS
Trigger: ACTGAAACACAGCTGCACCCATTGATTTACATACTG...CCCCACCCTCATGACCACATCTAACCTAATTCCCTCCCCAAATGCTCCATCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR TCA 90 bp GCTCCTGTCCTGCAGAACACTGTCAGCTATGAGGGCAAAAATCGTGTCTGTTTATCCTTCGTTTGGATTTaGATATCCCTCTCCTTTCCG +
Preference number: 4 (lower is better)
Translates to: APVLQNTVSYEGKNRVCLSFVWI*ISLSFP
Trigger: CGGAAAGGAGAGGGATATTCAAATCCAAACGAAGGA...TAAACAGACACGATTTTTGCCCTCATAGCTGACAGTGTTCTGCAGGACAGGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR TCA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCTGTATTTGCCTCCCTTaGAGTATACGGTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTCICLP*SIRFPS
Trigger: AGAAGGGAACCGTATACTTCAAGGGAGGCAAATACA...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCAGCAAGGAGAAATaGTTCAGAAGCTTTCGATTC +
Preference number: 4 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTGSKEK*FRSFRF
Trigger: GAATCGAAAGCTTCTGAATCATTTCTCCTTGCTGCC...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATAAAAGTCACCCTTGGCTaGCTCAAACTCGTTCATGAG +
Preference number: 4 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGIKVTLG*LKLVHE
Trigger: CTCATGAACGAGTTTGAGTCAGCCAAGGGTGACTTT...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACCCCACATTGTTAGGATaGTCTCCAGGGACCCTGAAT +
Preference number: 4 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNPTLLG*SPGTLN
Trigger: ATTCAGGGTCCCTGGAGATCATCCTAACAATGTGGG...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAAGTTTCTGCAGTGCTATaGAAGTTCAAAGGTAAAACC +
Preference number: 4 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQVSAVL*KFKGKT
Trigger: GGTTTTACCTTTGAACTTTCATAGCACTGCAGAAAC...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp AGGAATATCCGGAGATTCCTCATAAAAGCAAGTGTGCAGGAATCATCTTGGCCAGGGACTCACACACCTTaGAGTATACGGTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: RNIRRFLIKASVQESSWPGTHTP*SIRFPS
Trigger: AGAAGGGAACCGTATACTTCAAGGTGTGTGAGTCCC...TGGCCAAGATGATTCCTGCACACTTGCTTTTATGAGGAATCTCCGGATATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR TCA 90 bp GCAGATGGAGCATTTGGGGAGGGAATTAGGTTAGATGTGGTCATGAGGGTGGGGTCCAAGAAGGGTTTCTaGGAAGCAATTTATGATGAA +
Preference number: 4 (lower is better)
Translates to: ADGAFGEGIRLDVVMRVGSKKGF*EAIYDE
Trigger: TTCATCATAAATTGCTTCTCAGAAACCCTTCTTGGA...CCCCACCCTCATGACCACATCTAACCTAATTCCCTCCCCAAATGCTCCATCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR TCA 90 bp GCTCCTGTCCTGCAGAACACTGTCAGCTATGAGGGCAAAAATCGTGTCTGTTTAAAACGAAAGAAACCTTaGCAGAACTCCCATTCTCCC +
Preference number: 4 (lower is better)
Translates to: APVLQNTVSYEGKNRVCLKRKKP*QNSHSP
Trigger: GGGAGAATGGGAGTTCTGTCAAGGTTTCTTTCGTTT...TAAACAGACACGATTTTTGCCCTCATAGCTGACAGTGTTCTGCAGGACAGGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR TCA 90 bp GCAGATGGAGCATTTGGGGAGGGAATTAGGTTAGATGTGGTCATGAGGGTGGGGACACTTCCACAAAACTaGTTTCATGACCCAATATTG +
Preference number: 4 (lower is better)
Translates to: ADGAFGEGIRLDVVMRVGTLPQN*FHDPIL
Trigger: CAATATTGGGTCATGAAATCAGTTTTGTGGAAGTGT...CCCCACCCTCATGACCACATCTAACCTAATTCCCTCCCCAAATGCTCCATCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR TCA 90 bp GCTCCTGTCCTGCAGAACACTGTCAGCTATGAGGGCAAAAATCGTGTCTGTTTAGTTGTTTCACTGAGATaGGATAGGAAGGACAGGCAT +
Preference number: 4 (lower is better)
Translates to: APVLQNTVSYEGKNRVCLVVSLR*DRKDRH
Trigger: ATGCCTGTCCTTCCTATCTCATCTCAGTGAAACAAC...TAAACAGACACGATTTTTGCCCTCATAGCTGACAGTGTTCTGCAGGACAGGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR GCA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACCACCCCAATGTCCCATaGCTTGATGACTTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNHPNVP*LDDLAF
Trigger: AAAGGCCAAGTCATCAAGGCATGGGACATTGGGGTG...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACGCCAGCCGAGCCATATaGATATTCTGGTTTGCACAG +
Preference number: 4 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNASRAI*IFWFAQ
Trigger: CTGTGCAAACCAGAATATGCATATGGCTCGGCTGGC...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATATTCGCCCACAGTGAATaGCACATCTCTGCAGTCAAA +
Preference number: 4 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGIFAHSE*HISAVK
Trigger: TTTGACTGCAGAGATGTGGCATTCACTGTGGGCGAA...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGCCAGAAACTCTCATCTaGTCATTATCATTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGPETLI*SLSLLK
Trigger: CTTCAGCAATGATAATGAGCAGATGAGAGTTTCTGG...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp GCTCCTGTCCTGCAGAACACTGTCAGCTATGAGGGCAAAAATCGTGTCTGTTTATCACTAAGCCCTTTCTaGTTGACATGGAGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: APVLQNTVSYEGKNRVCLSLSPF*LTWRRH
Trigger: ATGCCTTCTCCATGTCAAGCAGAAAGGGCTTAGTGA...TAAACAGACACGATTTTTGCCCTCATAGCTGACAGTGTTCTGCAGGACAGGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR GCA 90 bp GCAGATGGAGCATTTGGGGAGGGAATTAGGTTAGATGTGGTCATGAGGGTGGGGACACTTATGCCTCACTaGTTTATACTGCTGAAAAAC +
Preference number: 4 (lower is better)
Translates to: ADGAFGEGIRLDVVMRVGTLMPH*FILLKN
Trigger: GTTTTTCAGCAGTATAAAGCAGTGAGGCATAAGTGT...CCCCACCCTCATGACCACATCTAACCTAATTCCCTCCCCAAATGCTCCATCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CCA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCCATGCCTTGATGACTTaGCCTTTGCCAAGACTAAAG +
Preference number: 4 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTHALMT*PLPRLK
Trigger: CTTTAGTCTTGGCAAAGGCCAAGTCATCAAGGCATG...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATACTTGCAGCCTTATTCTaGGGGTTTACTTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGILAALF*GFTSST
Trigger: AGTGCTGGAAGTAAACCCCCAGAATAAGGCTGCAAG...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATAGGTCAGCTCAAGTACTaGAGATTTAGGCTACTGGCT +
Preference number: 4 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGIGQLKY*RFRLLA
Trigger: AGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACC...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCGCATCATCTGAGTCTTaGAATAGCTTTCTTGTTTGT +
Preference number: 4 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLASSES*NSFLVC
Trigger: ACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp GCTCCTGTCCTGCAGAACACTGTCAGCTATGAGGGCAAAAATCGTGTCTGTTTAAGTTCGAGACCAGCCTaGCCGTCTCTACTAAAAATA +
Preference number: 4 (lower is better)
Translates to: APVLQNTVSYEGKNRVCLSSRPA*PSLLKI
Trigger: TATTTTTAGTAGAGACGGCCAGGCTGGTCTCGAACT...TAAACAGACACGATTTTTGCCCTCATAGCTGACAGTGTTCTGCAGGACAGGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR TCA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCCATTCCCCACTCTTTTaGCAATCTTTAATACTCCCC +
Preference number: 4 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTHSPLF*QSLILP
Trigger: GGGGAGTATTAAAGATTGTCAAAAGAGTGGGGAATG...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATATGTATTTGCCTCCCTTaGAGTATACGGTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGICICLP*SIRFPS
Trigger: AGAAGGGAACCGTATACTTCAAGGGAGGCAAATACA...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGGTAGAGAACCTCCTCTaGGAAGCGTTCTGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: ASSESWNSFLVCYLQKARVENLL*EAFCPC
Trigger: GCAGGGACAGAACGCTTCTCAGAGGAGGTTCTCTAC...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536438.5
CDS-3UTR TCA 90 bp GCTCCTGTCCTGCAGAACACTGTCAGCTATGAGGGCAAAAATCGTGTCTGTTTACATGTGTGTGACTGCTaGTCCAGATTTTATCCAAAG +
Preference number: 4 (lower is better)
Translates to: APVLQNTVSYEGKNRVCLHVCDC*SRFYPK
Trigger: CTTTGGATAAAATCTGGATCAGCAGTCACACACATG...TAAACAGACACGATTTTTGCCCTCATAGCTGACAGTGTTCTGCAGGACAGGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR TCA 90 bp AGGAATATCCGGAGATTCCTCATAAAAGCAAGTGTGCAGGAATCATCTTGGCCAGAACAGCAAGGGTGGTaGAAATATAGCAAAGCCCGA +
Preference number: 4 (lower is better)
Translates to: RNIRRFLIKASVQESSWPEQQGW*KYSKAR
Trigger: TCGGGCTTTGCTATATTTTCACCACCCTTGCTGTTC...TGGCCAAGATGATTCCTGCACACTTGCTTTTATGAGGAATCTCCGGATATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR TCA 90 bp AATCCTAGAGTCATAAACGGCTTGTTTCTAAATCACATTACTGGTATCTTGGAATGGAGGGCCTGGGTGTaGATGAGGGCCAGGCTACAT +
Preference number: 4 (lower is better)
Translates to: NPRVINGLFLNHITGILEWRAWV*MRARLH
Trigger: ATGTAGCCTGGCCCTCATTCACACCCAGGCCCTCCA...TTCCAAGATACCAGTAATGTGATTTAGAAACAAGCCGTTTATGACTCTAGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR TCA 90 bp AGGAATATCCGGAGATTCCTCATAAAAGCAAGTGTGCAGGAATCATCTTGGCCAGTGGGGATTCTCCTTTaGGGAGGTGATAAGCTCAAA +
Preference number: 4 (lower is better)
Translates to: RNIRRFLIKASVQESSWPVGILL*GGDKLK
Trigger: TTTGAGCTTATCACCTCCTCAAAGGAGAATCCCCAC...TGGCCAAGATGATTCCTGCACACTTGCTTTTATGAGGAATCTCCGGATATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR TCA 90 bp AGGAATATCCGGAGATTCCTCATAAAAGCAAGTGTGCAGGAATCATCTTGGCCAATATACATGCTCATATaGGAAACGCTGGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: RNIRRFLIKASVQESSWPIYMLI*ETLGAE
Trigger: CTCAGCCCCCAGCGTTTCTCATATGAGCATGTATAT...TGGCCAAGATGATTCCTGCACACTTGCTTTTATGAGGAATCTCCGGATATTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR GCA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACTTCGCCCACAGTGAATaGCACATCTCTGCAGTCAAA +
Preference number: 4 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNFAHSE*HISAVK
Trigger: TTTGACTGCAGAGATGTGGCATTCACTGTGGGCGAA...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATACATTGTTCTTCCCGCTaGATTTTCTCCAGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGIHCSSR*IFSRAL
Trigger: CAAAGCTCTGGAGAAAATGCAGCGGGAAGAACAATG...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACTGGCACATGGAGATCTaGAGTCTTGCAGCCTTATTC +
Preference number: 4 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNWHMEI*SLAALF
Trigger: GAATAAGGCTGCAAGACTGCAGATCTCCATGTGCCA...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCAGTCTTCTTGCCCATTaGTTTATTGGCCTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTSLLAH*FIGLFL
Trigger: AAGGAAGAGGCCAATAAAGCAATGGGCAAGAAGACT...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp AATCCTAGAGTCATAAACGGCTTGTTTCTAAATCACATTACTGGTATCTTGGAAAACTCGGGTGCTTGCTaGCCTCTGCCCTCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: NPRVINGLFLNHITGILENSGAC*PLPSLH
Trigger: GTGGAGAGAGGGCAGAGGGCAGCAAGCACCCGAGTT...TTCCAAGATACCAGTAATGTGATTTAGAAACAAGCCGTTTATGACTCTAGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CCA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATACATGCCTTGATGACTTaGCCTTTGCCAAGACTAAAG +
Preference number: 4 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGIHALMT*PLPRLK
Trigger: CTTTAGTCTTGGCAAAGGCCAAGTCATCAAGGCATG...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp AGGAATGTAAATATGGAATCAAGACTTTTTCTAAAGTGGTGTGGTGGCTCACGCCAGCGGCCTTCCAGGTaGATTTCTACTGTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: RNVNMESRLFLKWCGGSRQRPSR*ISTVAP
Trigger: AGGAGCAACAGTAGAAATCCACCTGGAAGGCCGCTG...GCGTGAGCCACCACACCACTTTAGAAAAAGTCTTGATTCCATATTTACATTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CCA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATATCTCAAAGTCACCCTTaGCTGACTCAAACTCGTTCA +
Preference number: 4 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGISQSHP*LTQTRS
Trigger: TGAACGAGTTTGAGTCAGCCAAGGGTGACTTTGAGA...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACCCTTTTTCTGGCACATaGAGATCTGCAGTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNPFSGT*RSAVLQ
Trigger: CTGCAAGACTGCAGATCTCCATGTGCCAGAAAAAGG...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGTACTGTGGGTTCTGTTaGTTAAAAATGCAACAGACT +
Preference number: 4 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGYCGFC*LKMQQT
Trigger: AGTCTGTTGCATTTTTAACCAACAGAACCCACAGTA...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACCTTGCCCTAGTTCAATaGTCAGCTCAAGTACTGGAG +
Preference number: 4 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNLALVQ*SAQVLE
Trigger: CTCCAGTACTTGAGCTGACCATTGAACTAGGGCAAG...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATAAAGCAAATGGTTCCTTaGGTTGCCAAATGCATTCCC +
Preference number: 4 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGIKQMVP*VAKCIP
Trigger: GGGAATGCATTTGGCAACCCAAGGAACCATTTGCTT...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCGTTGAAAGATGTCTGTaGACTTCTACACAAATTGTT +
Preference number: 4 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLVERCL*TSTQIV
Trigger: AACAATTTGTGTAGAAGTCCACAGACATCTTTCAAC...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp GGCAGATTGAAACCTGCCCTGAGTTGGGAAGGGAATATGTACAGGAAACTATCTTTTTCTAAAGTGGTGTaGTGGCTCACGCCTATAGTC +
Preference number: 4 (lower is better)
Translates to: GRLKPALSWEGNMYRKLSFSKVV*WLTPIV
Trigger: GACTATAGGCGTGAGCCACCACACCACTTTAGAAAA...AGATAGTTTCCTGTACATATTCCCTTCCCAACTCAGGGCAGGTTTCAATCTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR CAA 72 bp TGGTCTTTGAGGACAGGCAGCATTGTCCTCTCCCTTTaGGAATATTCAGGGTTTAGCACCAAGAGGTCTTTA +
Preference number: 4 (lower is better)
Translates to: WSLRTGSIVLSL*EYSGFSTKRSL
Trigger: TAAAGACCTCTTGGTGCTAAACCCTGAATATTCCAAAAGGGAGAGGACAATGCTGCCTGTCCTCAAAGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR TCA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACACTATCTTCCCATACTaGATCACCGCCTGCATGTAT +
Preference number: 4 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNTIFPY*ITACMY
Trigger: ATACATGCAGGCGGTGATTCAGTATGGGAAGATAGT...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCAAGGTTGATAGAAACTaGAATGAGCTGGACTTAAGC +
Preference number: 4 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTKVDRN*NELDLS
Trigger: GCTTAAGTCCAGCTCATTTCAGTTTCTATCAACCTT...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACAATGAAAGAAGAAGCTaGGCAGTAGCAATGCTGGGA +
Preference number: 4 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNNERRS*AVAMLG
Trigger: TCCCAGCATTGCTACTGCTCAGCTTCTTCTTTCATT...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACAGCCTAAAAGGTGGTTaGAAGATGTCTGTGGACTTC +
Preference number: 4 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNSLKGG*KMSVDF
Trigger: GAAGTCCACAGACATCTTTCAACCACCTTTTAGGCT...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp AGGAATATCCGGAGATTCCTCATAAAAGCAAGTGTGCAGGAATCATCTTGGCCATCTCAGCTCAAATTCTaGAAACACATGGTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: RNIRRFLIKASVQESSWPSQLKF*KHMVPS
Trigger: AGAGGGCACCATGTGTTTTCAGAATTTGAGCTGAGA...TGGCCAAGATGATTCCTGCACACTTGCTTTTATGAGGAATCTCCGGATATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR TCA 90 bp AGGAATGTAAATATGGAATCAAGACTTTTTCTAAAGTGGTGTGGTGGCTCACGCTGTGGAAAGGCCATGTaGGAACACAGCAAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: RNVNMESRLFLKWCGGSRCGKAM*EHSKKG
Trigger: TCCCTTCTTGCTGTGTTCTCACATGGCCTTTCCACA...GCGTGAGCCACCACACCACTTTAGAAAAAGTCTTGATTCCATATTTACATTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR TCA 90 bp AGGAATGTAAATATGGAATCAAGACTTTTTCTAAAGTGGTGTGGTGGCTCACGCAAGAGGACATGCCTGTaGTACAGGACTTCAAGTGGG +
Preference number: 4 (lower is better)
Translates to: RNVNMESRLFLKWCGGSRKRTCL*YRTSSG
Trigger: CCCACTTGAAGTCCTGTATCACAGGCATGTCCTCTT...GCGTGAGCCACCACACCACTTTAGAAAAAGTCTTGATTCCATATTTACATTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR GCA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACTCTTCCTTGGCATCCTaGTCTGCAAACTTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNSSLAS*SANFLN
Trigger: GTTCAAGAAGTTTGCAGAGCAGGATGCCAAGGAAGA...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATACTTCTGAAGTCTTCTTaGCCATTGCTTTATTGGCCT +
Preference number: 4 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGILLKSS*PLLYWP
Trigger: AGGCCAATAAAGCAATGGGCAAGAAGACTTCAGAAG...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCACTGGTTTTGCCATTTaGTTCCAGAATCACATAGAC +
Preference number: 4 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTTGFAI*FQNHID
Trigger: GTCTATGTGATTCTGGAAGCAAATGGCAAAACCAGT...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACCCTTGGGTTGCCAAATaGATTCCCATGAGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNPWVAK*IPMSVS
Trigger: AGAAACACTCATGGGAATGCATTTGGCAACCCAAGG...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp GCTCCTGTCCTGCAGAACACTGTCAGCTATGAGGGCAAAAATCGTGTCTGTTTATGTACAGACACTCATTaGTTTCTGCTACTGATCACT +
Preference number: 4 (lower is better)
Translates to: APVLQNTVSYEGKNRVCLCTDTH*FLLLIT
Trigger: AGTGATCAGTAGCAGAAAGCAATGAGTGTCTGTACA...TAAACAGACACGATTTTTGCCCTCATAGCTGACAGTGTTCTGCAGGACAGGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR GCA 90 bp AGGAATGTAAATATGGAATCAAGACTTTTTCTAAAGTGGTGTGGTGGCTCACGCAGTTCAGCCCATCTCTaGTCTCACCTACACATCTGG +
Preference number: 4 (lower is better)
Translates to: RNVNMESRLFLKWCGGSRSSAHL*SHLHIW
Trigger: CCAGATGTGTAGGTGAGAGCAGAGATGGGCTGAACT...GCGTGAGCCACCACACCACTTTAGAAAAAGTCTTGATTCCATATTTACATTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR GCA 90 bp GCTCCTGTCCTGCAGAACACTGTCAGCTATGAGGGCAAAAATCGTGTCTGTTTACTAAATATTCTACAATaGACAAGACAGCCCCACACA +
Preference number: 4 (lower is better)
Translates to: APVLQNTVSYEGKNRVCLLNILQ*TRQPHT
Trigger: TGTGTGGGGCTGTCTTGTGCATTGTAGAATATTTAG...TAAACAGACACGATTTTTGCCCTCATAGCTGACAGTGTTCTGCAGGACAGGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR GCA 90 bp AGGAATGTAAATATGGAATCAAGACTTTTTCTAAAGTGGTGTGGTGGCTCACGCCTCTCTCCACTCACATaGATGTGGAAAGGCCATGTG +
Preference number: 4 (lower is better)
Translates to: RNVNMESRLFLKWCGGSRLSPLT*MWKGHV
Trigger: CACATGGCCTTTCCACATGCATGTGAGTGGAGAGAG...GCGTGAGCCACCACACCACTTTAGAAAAAGTCTTGATTCCATATTTACATTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CCA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCTTTTTGGGAAGCTACTaGTTTTGCCATTTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTFLGSY*FCHLLP
Trigger: TGGAAGCAAATGGCAAAACCAGTAGCTTCCCAAAAA...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCATCAAATTTCAATCTTaGCCTCACTGGAACCATGCT +
Preference number: 4 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTIKFQS*PHWNHA
Trigger: AGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATAATGCAGCCTAAAAGGTaGTTGAAAGATGTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGIMQPKR*LKDVCG
Trigger: TCCACAGACATCTTTCAACCACCTTTTAGGCTGCAT...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp AGGAATGTAAATATGGAATCAAGACTTTTTCTAAAGTGGTGTGGTGGCTCACGCAGTTTGAGACCAGCCTaGGAAAGAAAGGGAGACCCT +
Preference number: 4 (lower is better)
Translates to: RNVNMESRLFLKWCGGSRSLRPA*ERKGDP
Trigger: AGGGTCTCCCTTTCTTTCCCAGGCTGGTCTCAAACT...GCGTGAGCCACCACACCACTTTAGAAAAAGTCTTGATTCCATATTTACATTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CCA 90 bp GGCAGATTGAAACCTGCCCTGAGTTGGGAAGGGAATATGTACAGGAAACTATCTCACAGAAATTCAGGCTaGAAAGAAACTTGGGGAACA +
Preference number: 4 (lower is better)
Translates to: GRLKPALSWEGNMYRKLSHRNSG*KETWGT
Trigger: TGTTCCCCAAGTTTCTTTCCAGCCTGAATTTCTGTG...AGATAGTTTCCTGTACATATTCCCTTCCCAACTCAGGGCAGGTTTCAATCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CCA 90 bp GGCAGATTGAAACCTGCCCTGAGTTGGGAAGGGAATATGTACAGGAAACTATCTTCTCACCTACACATCTaGACTCTGTGCAAATGCATA +
Preference number: 4 (lower is better)
Translates to: GRLKPALSWEGNMYRKLSSHLHI*TLCKCI
Trigger: TATGCATTTGCACAGAGTCCAGATGTGTAGGTGAGA...AGATAGTTTCCTGTACATATTCCCTTCCCAACTCAGGGCAGGTTTCAATCTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR CAA 72 bp CTGGGACTTACAGTCTCCAGAAGTAAATTCCTGTTGTaGAAGCCACCCAGTGTATGGTATTTTACTGTGGCA +
Preference number: 4 (lower is better)
Translates to: LGLTVSRSKFLL*KPPSVWYFTVA
Trigger: TGCCACAGTAAAATACCATACACTGGGTGGCTTCAACAACAGGAATTTACTTCTGGAGACTGTAAGTCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR TCA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCATAAATCCTCTCCTTTaGAATCAAGGAGCTCAATCT +
Preference number: 4 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTINPLL*NQGAQS
Trigger: AGATTGAGCTCCTTGATTTCAAAGGAGAGGATTTAT...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATAGTTTCTGCAGTGCTATaGAAGTTCAAAGGTAAAACC +
Preference number: 4 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGIVSAVL*KFKGKT
Trigger: GGTTTTACCTTTGAACTTTCATAGCACTGCAGAAAC...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp GGCAGATTGAAACCTGCCCTGAGTTGGGAAGGGAATATGTACAGGAAACTATCTCAATGGGTAGAACACTaGTTAAAACAGAATGAAGGG +
Preference number: 4 (lower is better)
Translates to: GRLKPALSWEGNMYRKLSQWVEH*LKQNEG
Trigger: CCCTTCATTCTGTTTTAATCAGTGTTCTACCCATTG...AGATAGTTTCCTGTACATATTCCCTTCCCAACTCAGGGCAGGTTTCAATCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR GCA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACAGTCTTCTTGCCCATTaGTTTATTGGCCTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNSLLAH*FIGLFL
Trigger: AAGGAAGAGGCCAATAAAGCAATGGGCAAGAAGACT...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATAACTGGTTTTGCCATTTaGTTCCAGAATCACATAGAC +
Preference number: 4 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGITGFAI*FQNHID
Trigger: GTCTATGTGATTCTGGAAGCAAATGGCAAAACCAGT...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATATACACATTTAAGACTTaGCCTAGTTCAATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGIYTFKT*PSSMVS
Trigger: GCTGACCATTGAACTAGGGCAAGTCTTAAATGTGTA...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCTTCTTGTTTGTTATCTaGAAAAAGCTAGGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTFLFVI*KKLGGL
Trigger: AAGGCCACCTAGCTTTTTGCAGATAACAAACAAGAA...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATATTTTTGGGAAGCTACTaGTTTTGCCATTTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGIFLGSY*FCHLLP
Trigger: TGGAAGCAAATGGCAAAACCAGTAGCTTCCCAAAAA...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGCATCATCTGAGTCTTaGAATAGCTTTCTTGTTTGT +
Preference number: 4 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTASSES*NSFLVC
Trigger: ACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACATGCAGCCTAAAAGGTaGTTGAAAGATGTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNMQPKR*LKDVCG
Trigger: TCCACAGACATCTTTCAACCACCTTTTAGGCTGCAT...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp AGGAATGTAAATATGGAATCAAGACTTTTTCTAAAGTGGTGTGGTGGCTCACGCAAACCTGCCCTGAGTTaGGAAGGGAATATGTACAGG +
Preference number: 4 (lower is better)
Translates to: RNVNMESRLFLKWCGGSRKPALS*EGNMYR
Trigger: CCTGTACATATTCCCTTCCCAACTCAGGGCAGGTTT...GCGTGAGCCACCACACCACTTTAGAAAAAGTCTTGATTCCATATTTACATTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CCA 90 bp AGGAATATCCGGAGATTCCTCATAAAAGCAAGTGTGCAGGAATCATCTTGGCCAACATTACTGGTATCTTaGAACAGCAAGGGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: RNIRRFLIKASVQESSWPTLLVS*NSKGGE
Trigger: TTCACCACCCTTGCTGTTCCAAGATACCAGTAATGT...TGGCCAAGATGATTCCTGCACACTTGCTTTTATGAGGAATCTCCGGATATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CCA 90 bp GCTCCTGTCCTGCAGAACACTGTCAGCTATGAGGGCAAAAATCGTGTCTGTTTAGCAAATATTACATTCTaGCAAGTGCTAGTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: APVLQNTVSYEGKNRVCLANITF*QVLVPN
Trigger: GTTTGGAACTAGCACTTGCCAGAATGTAATATTTGC...TAAACAGACACGATTTTTGCCCTCATAGCTGACAGTGTTCTGCAGGACAGGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR CAA 72 bp GATCTGGGACTTACAGTCTCCAGAAGTAAATTCCTGTaGTTGAAGCCACCCAGTGTATGGTATTTTACTGTG +
Preference number: 4 (lower is better)
Translates to: DLGLTVSRSKFL*LKPPSVWYFTV
Trigger: CACAGTAAAATACCATACACTGGGTGGCTTCAACAACAGGAATTTACTTCTGGAGACTGTAAGTCCCAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR TCA 90 bp AATCCTAGAGTCATAAACGGCTTGTTTCTAAATCACATTACTGGTATCTTGGAATGCTTTAGGAGTGAGTaGTACTGTGGTGGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: NPRVINGLFLNHITGILECFRSE*YCGGWG
Trigger: TCCCCACCCACCACAGTATCACTCACTCCTAAAGCA...TTCCAAGATACCAGTAATGTGATTTAGAAACAAGCCGTTTATGACTCTAGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR TCA 90 bp GGCAGATTGAAACCTGCCCTGAGTTGGGAAGGGAATATGTACAGGAAACTATCTTTCCCACTTAAAAGCTaGGTACAATTCAATCCTACT +
Preference number: 4 (lower is better)
Translates to: GRLKPALSWEGNMYRKLSFPLKS*VQFNPT
Trigger: AGTAGGATTGAATTGTACTCAGCTTTTAAGTGGGAA...AGATAGTTTCCTGTACATATTCCCTTCCCAACTCAGGGCAGGTTTCAATCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR TCA 90 bp AGGAATGTAAATATGGAATCAAGACTTTTTCTAAAGTGGTGTGGTGGCTCACGCCAAACTGTAGTTTGCTaGCCCCTGATCTATAGGCAA +
Preference number: 4 (lower is better)
Translates to: RNVNMESRLFLKWCGGSRQTVVC*PLIYRQ
Trigger: TTGCCTATAGATCAGGGGTCAGCAAACTACAGTTTG...GCGTGAGCCACCACACCACTTTAGAAAAAGTCTTGATTCCATATTTACATTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR GCA 90 bp AGGAATGTAAATATGGAATCAAGACTTTTTCTAAAGTGGTGTGGTGGCTCACGCCATTGTTCTTCCCGCTaGATTTTCTCCAGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: RNVNMESRLFLKWCGGSRHCSSR*IFSRAL
Trigger: CAAAGCTCTGGAGAAAATGCAGCGGGAAGAACAATG...GCGTGAGCCACCACACCACTTTAGAAAAAGTCTTGATTCCATATTTACATTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR GCA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACCCAGAAACTCTCATCTaGTCATTATCATTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNPETLI*SLSLLK
Trigger: CTTCAGCAATGATAATGAGCAGATGAGAGTTTCTGG...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR GCA 90 bp AGGAATGTAAATATGGAATCAAGACTTTTTCTAAAGTGGTGTGGTGGCTCACGCCCCGAATGTGATATTTaGAGATGGAGCATTTGGGGA +
Preference number: 4 (lower is better)
Translates to: RNVNMESRLFLKWCGGSRPECDI*RWSIWG
Trigger: TCCCCAAATGCTCCATCTGCAAATATCACATTCGGG...GCGTGAGCCACCACACCACTTTAGAAAAAGTCTTGATTCCATATTTACATTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CCA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGCCTTTTTCTGGCACATaGAGATCTGCAGTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: ASSESWNSFLVCYLQKARPFSGT*RSAVLQ
Trigger: CTGCAAGACTGCAGATCTCCATGTGCCAGAAAAAGG...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp GGCAGATTGAAACCTGCCCTGAGTTGGGAAGGGAATATGTACAGGAAACTATCTTCTAAATCACATTACTaGTATCTTGGAACAGCAAGG +
Preference number: 4 (lower is better)
Translates to: GRLKPALSWEGNMYRKLSSKSHY*YLGTAR
Trigger: CCTTGCTGTTCCAAGATACCAGTAATGTGATTTAGA...AGATAGTTTCCTGTACATATTCCCTTCCCAACTCAGGGCAGGTTTCAATCTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR CAA 72 bp GCTGACTTGGCAATCCATATGCAGCCTAAAAGGTGGTaGAAAGATGTCTGTGGACTTCTACACAAATTGTTT +
Preference number: 4 (lower is better)
Translates to: ADLAIHMQPKRW*KDVCGLLHKLF
Trigger: AAACAATTTGTGTAGAAGTCCACAGACATCTTTCAACCACCTTTTAGGCTGCATATGGATTGCCAAGTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR CAA 72 bp GAGATTCCTCATAAAAGCAAGTGTGCAGGAATCATCTaGGCCATTAGAAGCAATCAATACTCTCCTGTCAGT +
Preference number: 4 (lower is better)
Translates to: EIPHKSKCAGII*AIRSNQYSPVS
Trigger: ACTGACAGGAGAGTATTGATTGCTTCTAATGGCCAAGATGATTCCTGCACACTTGCTTTTATGAGGAATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR CAA 72 bp AGCTATGAGGGCAAAAATCGTGTCTGTTTAACTCGCTaGCACAATGCCTGGCTTAATATTATGCTGTTACCT +
Preference number: 4 (lower is better)
Translates to: SYEGKNRVCLTR*HNAWLNIMLLP
Trigger: AGGTAACAGCATAATATTAAGCCAGGCATTGTGCAAGCGAGTTAAACAGACACGATTTTTGCCCTCATAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR TCA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGGGCAGCAAGGAGAAATaGTTCAGAAGCTTTCGATTC +
Preference number: 4 (lower is better)
Translates to: ASSESWNSFLVCYLQKARGSKEK*FRSFRF
Trigger: GAATCGAAAGCTTCTGAATCATTTCTCCTTGCTGCC...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGGCTCTGCAAACTTCTTaGACATGTTGGCGTATATCC +
Preference number: 4 (lower is better)
Translates to: ASSESWNSFLVCYLQKARALQTS*TCWRIS
Trigger: GGATATACGCCAACATGTTCAAGAAGTTTGCAGAGC...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp AGGAATGTAAATATGGAATCAAGACTTTTTCTAAAGTGGTGTGGTGGCTCACGCACTAAAGGAAAGAGATaGAAGACAGGGTGGACTCTT +
Preference number: 4 (lower is better)
Translates to: RNVNMESRLFLKWCGGSRTKGKR*KTGWTL
Trigger: AAGAGTCCACCCTGTCTTTCATCTCTTTCCTTTAGT...GCGTGAGCCACCACACCACTTTAGAAAAAGTCTTGATTCCATATTTACATTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR TCA 90 bp AATCCTAGAGTCATAAACGGCTTGTTTCTAAATCACATTACTGGTATCTTGGAAGCTCAAAACCACAGATaGTACATCCTGCCAGATGGC +
Preference number: 4 (lower is better)
Translates to: NPRVINGLFLNHITGILEAQNHR*YILPDG
Trigger: GCCATCTGGCAGGATGTATCATCTGTGGTTTTGAGC...TTCCAAGATACCAGTAATGTGATTTAGAAACAAGCCGTTTATGACTCTAGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR GCA 90 bp AATCCTAGAGTCATAAACGGCTTGTTTCTAAATCACATTACTGGTATCTTGGAAGTAATATCCTCTCCCTaGTCAGCAACAGTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: NPRVINGLFLNHITGILEVISSP*SATVAV
Trigger: CACAGCCACTGTTGCTGAGCAGGGAGAGGATATTAC...TTCCAAGATACCAGTAATGTGATTTAGAAACAAGCCGTTTATGACTCTAGGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR GCA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGCACCCTGTAGTTATTTaGTCAGAACCACTCACACAC +
Preference number: 4 (lower is better)
Translates to: ASSESWNSFLVCYLQKARHPVVI*SEPLTH
Trigger: GTGTGTGAGTGGTTCTGAGCAAATAACTACAGGGTG...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGAAGCAAATGGTTCCTTaGGTTGCCAAATGCATTCCC +
Preference number: 4 (lower is better)
Translates to: ASSESWNSFLVCYLQKARKQMVP*VAKCIP
Trigger: GGGAATGCATTTGGCAACCCAAGGAACCATTTGCTT...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp AATCCTAGAGTCATAAACGGCTTGTTTCTAAATCACATTACTGGTATCTTGGAAGTAATCTCAGCACTTTaGGAAGCTGAGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: NPRVINGLFLNHITGILEVISAL*EAEVGG
Trigger: TCCTCCCACCTCAGCTTCCCAAAGTGCTGAGATTAC...TTCCAAGATACCAGTAATGTGATTTAGAAACAAGCCGTTTATGACTCTAGGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CCA 90 bp AGGAATGTAAATATGGAATCAAGACTTTTTCTAAAGTGGTGTGGTGGCTCACGCCCTTTCTGCTTGACATaGAGAAGGCATATATTTGGG +
Preference number: 4 (lower is better)
Translates to: RNVNMESRLFLKWCGGSRPFCLT*RRHIFG
Trigger: CCCAAATATATGCCTTCTCCATGTCAAGCAGAAAGG...GCGTGAGCCACCACACCACTTTAGAAAAAGTCTTGATTCCATATTTACATTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR TCA 90 bp AGGAATGTAAATATGGAATCAAGACTTTTTCTAAAGTGGTGTGGTGGCTCACGCCCTGTCAGTTTGTTTTaGAATTTGTGCATGTCCTCT +
Preference number: 4 (lower is better)
Translates to: RNVNMESRLFLKWCGGSRPVSLF*NLCMSS
Trigger: AGAGGACATGCACAAATTTCAAAACAAACTGACAGG...GCGTGAGCCACCACACCACTTTAGAAAAAGTCTTGATTCCATATTTACATTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR TCA 90 bp AATCCTAGAGTCATAAACGGCTTGTTTCTAAATCACATTACTGGTATCTTGGAATGTACTCCCTGCTTCTaGGGTACTAAAGCAGTTCTC +
Preference number: 4 (lower is better)
Translates to: NPRVINGLFLNHITGILECTPCF*GTKAVL
Trigger: GAGAACTGCTTTAGTACCTCAGAAGCAGGGAGTACA...TTCCAAGATACCAGTAATGTGATTTAGAAACAAGCCGTTTATGACTCTAGGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR GCA 90 bp AATCCTAGAGTCATAAACGGCTTGTTTCTAAATCACATTACTGGTATCTTGGAATTCGCCCACAGTGAATaGCACATCTCTGCAGTCAAA +
Preference number: 4 (lower is better)
Translates to: NPRVINGLFLNHITGILEFAHSE*HISAVK
Trigger: TTTGACTGCAGAGATGTGGCATTCACTGTGGGCGAA...TTCCAAGATACCAGTAATGTGATTTAGAAACAAGCCGTTTATGACTCTAGGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CCA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACGTTGAAAGATGTCTGTaGACTTCTACACAAATTGTT +
Preference number: 4 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNVERCL*TSTQIV
Trigger: AACAATTTGTGTAGAAGTCCACAGACATCTTTCAAC...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp AGGAATATCCGGAGATTCCTCATAAAAGCAAGTGTGCAGGAATCATCTTGGCCAATAAATTCTTTGAGATaGAAAGGATTGCATAGGGAC +
Preference number: 4 (lower is better)
Translates to: RNIRRFLIKASVQESSWPINSLR*KGLHRD
Trigger: GTCCCTATGCAATCCTTTCCATCTCAAAGAATTTAT...TGGCCAAGATGATTCCTGCACACTTGCTTTTATGAGGAATCTCCGGATATTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CCA 90 bp AGGAATATCCGGAGATTCCTCATAAAAGCAAGTGTGCAGGAATCATCTTGGCCATCTAGTTGTTTCATTTaGATTAACATTGCCACTCCT +
Preference number: 4 (lower is better)
Translates to: RNIRRFLIKASVQESSWPSSCFI*INIATP
Trigger: AGGAGTGGCAATGTTAATCCAAATGAAACAACTAGA...TGGCCAAGATGATTCCTGCACACTTGCTTTTATGAGGAATCTCCGGATATTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CCA 90 bp AGGAATGTAAATATGGAATCAAGACTTTTTCTAAAGTGGTGTGGTGGCTCACGCTTTAGTTGTCATAACTaGGTAGGATGCTACTGGCAT +
Preference number: 4 (lower is better)
Translates to: RNVNMESRLFLKWCGGSRFSCHN*VGCYWH
Trigger: ATGCCAGTAGCATCCTACCCAGTTATGACAACTAAA...GCGTGAGCCACCACACCACTTTAGAAAAAGTCTTGATTCCATATTTACATTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR CAA 72 bp CTGGCAAGTGCTAGTTCCAAACACAGCCAATCCTATTaGAACCAGTCTCTGTTGCAACTACTAAATTCTTAT +
Preference number: 4 (lower is better)
Translates to: LASASSKHSQSY*NQSLLQLLNSY
Trigger: ATAAGAATTTAGTAGTTGCAACAGAGACTGGTTCAAATAGGATTGGCTGTGTTTGGAACTAGCACTTGCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR TCA 90 bp AGGAATGTAAATATGGAATCAAGACTTTTTCTAAAGTGGTGTGGTGGCTCACGCACAAAACTGATTTCATaGCCCAATATTGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: RNVNMESRLFLKWCGGSRTKLIS*PNIVSA
Trigger: AGCTGAGACAATATTGGGTCATGAAATCAGTTTTGT...GCGTGAGCCACCACACCACTTTAGAAAAAGTCTTGATTCCATATTTACATTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR TCA 90 bp AGGAATGTAAATATGGAATCAAGACTTTTTCTAAAGTGGTGTGGTGGCTCACGCATTAAATTCAATGCCTaGCCAACAGTGTTAAGACCA +
Preference number: 4 (lower is better)
Translates to: RNVNMESRLFLKWCGGSRIKFNA*PTVLRP
Trigger: TGGTCTTAACACTGTTGGTCAGGCATTGAATTTAAT...GCGTGAGCCACCACACCACTTTAGAAAAAGTCTTGATTCCATATTTACATTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR GCA 90 bp AGGAATGTAAATATGGAATCAAGACTTTTTCTAAAGTGGTGTGGTGGCTCACGCAAAACACTTGTTGAGTaGCAACTATGTACCAAGCAA +
Preference number: 4 (lower is better)
Translates to: RNVNMESRLFLKWCGGSRKTLVE*QLCTKQ
Trigger: TTGCTTGGTACATAGTTGGCACTCAACAAGTGTTTT...GCGTGAGCCACCACACCACTTTAGAAAAAGTCTTGATTCCATATTTACATTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR GCA 90 bp AATCCTAGAGTCATAAACGGCTTGTTTCTAAATCACATTACTGGTATCTTGGAATTAATGCTCCTGTCCTaGAGAACACTGTCAGCTATG +
Preference number: 4 (lower is better)
Translates to: NPRVINGLFLNHITGILELMLLS*RTLSAM
Trigger: CATAGCTGACAGTGTTCTGCAGGACAGGAGCATTAA...TTCCAAGATACCAGTAATGTGATTTAGAAACAAGCCGTTTATGACTCTAGGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CCA 90 bp AATCCTAGAGTCATAAACGGCTTGTTTCTAAATCACATTACTGGTATCTTGGAACATGCCTTGATGACTTaGCCTTTGCCAAGACTAAAG +
Preference number: 4 (lower is better)
Translates to: NPRVINGLFLNHITGILEHALMT*PLPRLK
Trigger: CTTTAGTCTTGGCAAAGGCCAAGTCATCAAGGCATG...TTCCAAGATACCAGTAATGTGATTTAGAAACAAGCCGTTTATGACTCTAGGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CCA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGTTTTTGGGAAGCTACTaGTTTTGCCATTTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: ASSESWNSFLVCYLQKARFLGSY*FCHLLP
Trigger: TGGAAGCAAATGGCAAAACCAGTAGCTTCCCAAAAA...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CCA 90 bp AATCCTAGAGTCATAAACGGCTTGTTTCTAAATCACATTACTGGTATCTTGGAAAGACTTTTTCTAAAGTaGTGTGGTGGCTCACGCCTA +
Preference number: 4 (lower is better)
Translates to: NPRVINGLFLNHITGILERLFLK*CGGSRL
Trigger: TAGGCGTGAGCCACCACACCACTTTAGAAAAAGTCT...TTCCAAGATACCAGTAATGTGATTTAGAAACAAGCCGTTTATGACTCTAGGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR TCA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGTTTACCCGTAAGGACTaGAATTCAACTACATGTACA +
Preference number: 4 (lower is better)
Translates to: ASSESWNSFLVCYLQKARFTRKD*NSTTCT
Trigger: TGTACATGTAGTTGAATTTCAGTCCTTACGGGTAAA...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp AATCCTAGAGTCATAAACGGCTTGTTTCTAAATCACATTACTGGTATCTTGGAAATTGCTTTCTGCTACTaGTCACTAATTCTGGCCATC +
Preference number: 4 (lower is better)
Translates to: NPRVINGLFLNHITGILEIAFCY*SLILAI
Trigger: GATGGCCAGAATTAGTGATCAGTAGCAGAAAGCAAT...TTCCAAGATACCAGTAATGTGATTTAGAAACAAGCCGTTTATGACTCTAGGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR GCA 90 bp AATCCTAGAGTCATAAACGGCTTGTTTCTAAATCACATTACTGGTATCTTGGAATCTATCATACCCCCATaGTTTCTGGTGATCCATAAG +
Preference number: 4 (lower is better)
Translates to: NPRVINGLFLNHITGILESIIPP*FLVIHK
Trigger: CTTATGGATCACCAGAAAGCATGGGGGTATGATAGA...TTCCAAGATACCAGTAATGTGATTTAGAAACAAGCCGTTTATGACTCTAGGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CCA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGTACTGTGGGTTCTGTTaGTTAAAAATGCAACAGACT +
Preference number: 4 (lower is better)
Translates to: ASSESWNSFLVCYLQKARYCGFC*LKMQQT
Trigger: AGTCTGTTGCATTTTTAACCAACAGAACCCACAGTA...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
3UTR CAA 72 bp AAAGCTAATCCAGAAACTCTCATCTGCTCATTATCATaGCTGAAGGGTGTTTTAGGAATGACAGAATTACTC +
Preference number: 4 (lower is better)
Translates to: KANPETLICSLS*LKGVLGMTELL
Trigger: GAGTAATTCTGTCATTCCTAAAACACCCTTCAGCAATGATAATGAGCAGATGAGAGTTTCTGGATTAGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR TCA 90 bp AATCCTAGAGTCATAAACGGCTTGTTTCTAAATCACATTACTGGTATCTTGGAAAAAGTGTTGTTTCACTaGGATGAGATAGGAAGGACA +
Preference number: 4 (lower is better)
Translates to: NPRVINGLFLNHITGILEKVLFH*DEIGRT
Trigger: TGTCCTTCCTATCTCATCTCAGTGAAACAACACTTT...TTCCAAGATACCAGTAATGTGATTTAGAAACAAGCCGTTTATGACTCTAGGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
3UTR CAA 72 bp TTTAAAAACAATGTCTTTAATTCCTCATATGCTGACTaGGCAATCCATATGCAGCCTAAAAGGTGGTTGAAA +
Preference number: 4 (lower is better)
Translates to: FKNNVFNSSYAD*AIHMQPKRWLK
Trigger: TTTCAACCACCTTTTAGGCTGCATATGGATTGCCAAGTCAGCATATGAGGAATTAAAGACATTGTTTTTAAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS GCA 90 bp GTCGCCGCGGGGGCTCGCCGACTCCGTCACTCTCCGCCTTGCCCGTaGTCCGCTAACCCTTCAGCCCGCCCAGCAGGCCGCCCGCGCGCC +
Preference number: 5 (lower is better)
Translates to: VAAGARRLRHSPPCP*SANPSARPAGRPRA
Trigger: GGCGCGCGGGCGGCCTGCTGGGCGGGCTGAAGGGTTAGCGGAGCACGGGCAAGGCGGAGAGTGACGGAGTCGGCGAGCCCCCGCGGCGAC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000539068.5
ENST00000542713.1
CDS GCA 90 bp GAACCTGTCGCCGCGGGGGCTCGCCGACTCCGTCACTCTCCGCCTTaGCCGTGCTCCGCTAACCCTTCAGCCCGCCCAGCAGGCCGCCCG +
Preference number: 5 (lower is better)
Translates to: EPVAAGARRLRHSPP*PCSANPSARPAGRP
Trigger: CGGGCGGCCTGCTGGGCGGGCTGAAGGGTTAGCGGAGCACGGGCAAGGCGGAGAGTGACGGAGTCGGCGAGCCCCCGCGGCGACAGGTTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357266.9
ENST00000542713.1
CDS GCA 90 bp GTACCTGTCGCCGCGGGGGCTCGCCGACTCCGTCACTCTCCGCCTTaGCCGTGCTCCGCTAACCCTTCAGCCCGCCCAGCAGGCCGCCCG +
Preference number: 5 (lower is better)
Translates to: VPVAAGARRLRHSPP*PCSANPSARPAGRP
Trigger: CGGGCGGCCTGCTGGGCGGGCTGAAGGGTTAGCGGAGCACGGGCAAGGCGGAGAGTGACGGAGTCGGCGAGCCCCCGCGGCGACAGGTAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539068.5
CDS-3UTR CAA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGCTGTTCTGTCCTGAGTaGGGGGAAAGCCCATTGAGG +
Preference number: 5 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQLFCPE*GESPLR
Trigger: CCTCAATGGGCTTTCCCCCAACTCAGGACAGAACAG...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGCCAATGTCCCATGCCTaGATGACTTGGCCTTTGCCA +
Preference number: 5 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQPMSHA*MTWPLP
Trigger: TGGCAAAGGCCAAGTCATCAAGGCATGGGACATTGG...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGTCCAGTCCAAGGGCCTaGTCACAGCATTCAACAGCT +
Preference number: 5 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQSSPRA*SQHSTA
Trigger: AGCTGTTGAATGCTGTGACAAGGCCCTTGGACTGGA...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS TCA 90 bp GTAGTCCCTGTCTCTGTCTGGCTTCCGCTCTGCCCAAAGAGAATGTaGGGTCCTCAAGGGTGGGCGCAGTCCGGCAGCGAGGAATTTCCC +
Preference number: 5 (lower is better)
Translates to: VVPVSVWLPLCPKRM*GPQGWAQSGSEEFP
Trigger: GGGAAATTCCTCGCTGCCGGACTGCGCCCACCCTTGAGGACCTCACATTCTCTTTGGGCAGAGCGGAAGCCAGACAGAGACAGGGACTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536438.5
CDS-3UTR CAA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGACCGCCTGCATGTATTaGCCTCCCTTGAAGTATACG +
Preference number: 5 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQTACMY*PPLKYT
Trigger: CGTATACTTCAAGGGAGGCAAATACATGCAGGCGGT...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGTTGCCCATTGCTTTATaGGCCTCTTCCTTGGCATCC +
Preference number: 5 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQLPIAL*ASSLAS
Trigger: GGATGCCAAGGAAGAGGCCAATAAAGCAATGGGCAA...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGACTCCCCTGTCTTTTTaGGAGGTAATATCCTCTCCC +
Preference number: 5 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQTPLSF*EVISSP
Trigger: GGGAGAGGATATTACCTCCAAAAAAGACAGGGGAGT...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGCCTTCTGAAGTCTTCTaGCCCATTGCTTTATTGGCC +
Preference number: 5 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQPSEVF*PIALLA
Trigger: GGCCAATAAAGCAATGGGCAAGAAGACTTCAGAAGG...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS CCA 90 bp AAGCCCATTGAGGAGGGGCCGAGTTCACTGGGACTCTTCCCTCCTTaGCGTGGCGTCATACGTGGCCCTCAGGTTTCTCTTCTTCCATTG +
Preference number: 5 (lower is better)
Translates to: KPIEEGPSSLGLFPP*RGVIRGPQVSLLPL
Trigger: CAATGGAAGAAGAGAAACCTGAGGGCCACGTATGACGCCACGCCAAGGAGGGAAGAGTCCCAGTGAACTCGGCCCCTCCTCAATGGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGCTGTTGCTCCTTCGTTaGGATTTGAATATCCCTCTC +
Preference number: 5 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQLLLLR*DLNIPL
Trigger: GAGAGGGATATTCAAATCCAAACGAAGGAGCAACAG...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGGGTGGATTTCTACTGTaGCTCCTTCGTTTGGATTTG +
Preference number: 5 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQGGFLL*LLRLDL
Trigger: CAAATCCAAACGAAGGAGCAACAGTAGAAATCCACC...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGCTGCGGTCCCGCTCGTaGTGCTCCTTGGCCTTTTTC +
Preference number: 5 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWLRSRS*CSLAFF
Trigger: GAAAAAGGCCAAGGAGCACAACGAGCGGGACCGCAG...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGCTTTCTTCATTGTTCTaGGCACCTTCATCAGTAGTC +
Preference number: 5 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQLSSLF*APSSVV
Trigger: GACTACTGATGAAGGTGCCAAGAACAATGAAGAAAG...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGCCATTCCCCACTCTTTaGACAATCTTTAATACTCCC +
Preference number: 5 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQPFPTL*TIFNTP
Trigger: GGGAGTATTAAAGATTGTCAAAAGAGTGGGGAATGG...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGCTTTGTCAATTCCAATaGGAATGTCGTGGTCTTCTC +
Preference number: 5 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQLCQFQ*ECRGLL
Trigger: GAGAAGACCACGACATTCCAATTGGAATTGACAAAG...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGGGGACTCTTCCCTCCTaGGCGTGGCGTCATACGTGG +
Preference number: 5 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGGTLPS*AWRHTW
Trigger: CCACGTATGACGCCACGCCAAGGAGGGAAGAGTCCC...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGCTACTGTGGGTTCTGTaGGTTAAAAATGCAACAGAC +
Preference number: 5 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQLLWVL*VKNATD
Trigger: GTCTGTTGCATTTTTAACCAACAGAACCCACAGTAG...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGACACAGGGCTGGGGATaGTCGCTTCGTAGTCCCTGT +
Preference number: 5 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWTQGWG*SLRSPC
Trigger: ACAGGGACTACGAAGCGACAATCCCCAGCCCTGTGT...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536438.5
CDS-3UTR CAA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGCTGCGGTCCCGCTCGTaGTGCTCCTTGGCCTTTTTC +
Preference number: 5 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGLRSRS*CSLAFF
Trigger: GAAAAAGGCCAAGGAGCACAACGAGCGGGACCGCAG...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGTACTGGTTTTGCCATTaGCTTCCAGAATCACATAGA +
Preference number: 5 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQYWFCH*LPESHR
Trigger: TCTATGTGATTCTGGAAGCAAATGGCAAAACCAGTA...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp TGTTCCACCTGGAGTGGTCCCGTGCCACCCCTCAGTGAACCCTCCGGGCAGCAGATCTGCTCATTATCATaGCTGAAGGGTGTTTTAGGA +
Preference number: 5 (lower is better)
Translates to: CSTWSGPVPPLSEPSGQQICSLS*LKGVLG
Trigger: TCCTAAAACACCCTTCAGCAATGATAATGAGCAGAT...CTGCTGCCCGGAGGGTTCACTGAGGGGTGGCACGGGACCACTCCAGGTGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCACGGTTCCCTTCTCTTaGACAATGGCAGCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLTVPFS*TMAACS
Trigger: GGAGCAGGCTGCCATTGTCAAAGAGAAGGGAACCGT...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GCAGATGGAGCATTTGGGGAGGGAATTAGGTTAGATGTGGTCATGAGGGTGGGGACGGTTCCCTTCTCTTaGACAATGGCAGCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: ADGAFGEGIRLDVVMRVGTVPFS*TMAACS
Trigger: GGAGCAGGCTGCCATTGTCAAAGAGAAGGGAACCGT...CCCCACCCTCATGACCACATCTAACCTAATTCCCTCCCCAAATGCTCCATCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCCGCTCGTTGTGCTCCTaGGCCTTTTTCTGGCACATG +
Preference number: 5 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLRSLCS*AFFWHM
Trigger: CATGTGCCAGAAAAAGGCCAAGGAGCACAACGAGCG...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCCCCTCTCCTTTCCGTTaGGTTCTCCGGATAATGCCT +
Preference number: 5 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLPSPFR*VLRIMP
Trigger: AGGCATTATCCGGAGAACCAAACGGAAAGGAGAGGG...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGACGGTTCCCTTCTCTTaGACAATGGCAGCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGTVPFS*TMAACS
Trigger: GGAGCAGGCTGCCATTGTCAAAGAGAAGGGAACCGT...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCTCCAGTCCAAGGGCCTaGTCACAGCATTCAACAGCT +
Preference number: 5 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLSSPRA*SQHSTA
Trigger: AGCTGTTGAATGCTGTGACAAGGCCCTTGGACTGGA...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGCGCTCGTTGTGCTCCTaGGCCTTTTTCTGGCACATG +
Preference number: 5 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGRSLCS*AFFWHM
Trigger: CATGTGCCAGAAAAAGGCCAAGGAGCACAACGAGCG...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATAGGGACTCTTCCCTCCTaGGCGTGGCGTCATACGTGG +
Preference number: 5 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGIGTLPS*AWRHTW
Trigger: CCACGTATGACGCCACGCCAAGGAGGGAAGAGTCCC...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGCTGTTCTGTCCTGAGTaGGGGGAAAGCCCATTGAGG +
Preference number: 5 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGLFCPE*GESPLR
Trigger: CCTCAATGGGCTTTCCCCCAACTCAGGACAGAACAG...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGCACAGTCATTTCTGTTaGTTCCACCTGGAGTGGTCC +
Preference number: 5 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWHSHFC*FHLEWS
Trigger: GGACCACTCCAGGTGGAACAAACAGAAATGACTGTG...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GCAGATGGAGCATTTGGGGAGGGAATTAGGTTAGATGTGGTCATGAGGGTGGGGGGAGAAGGCATATATTaGGGGTGGGGAAGCAATGGG +
Preference number: 5 (lower is better)
Translates to: ADGAFGEGIRLDVVMRVGGEGIY*GWGSNG
Trigger: CCCATTGCTTCCCCACCCCAAATATATGCCTTCTCC...CCCCACCCTCATGACCACATCTAACCTAATTCCCTCCCCAAATGCTCCATCTGC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp GCAGATGGAGCATTTGGGGAGGGAATTAGGTTAGATGTGGTCATGAGGGTGGGGGTGTTCTTAGCCTTCTaGCCACTCTGCTGCCAAGTC +
Preference number: 5 (lower is better)
Translates to: ADGAFGEGIRLDVVMRVGVFLAF*PLCCQV
Trigger: GACTTGGCAGCAGAGTGGCAAGAAGGCTAAGAACAC...CCCCACCCTCATGACCACATCTAACCTAATTCCCTCCCCAAATGCTCCATCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGACTCCCCTGTCTTTTTaGGAGGTAATATCCTCTCCC +
Preference number: 5 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWTPLSF*EVISSP
Trigger: GGGAGAGGATATTACCTCCAAAAAAGACAGGGGAGT...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCACCGCCTGCATGTATTaGCCTCCCTTGAAGTATACG +
Preference number: 5 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLTACMY*PPLKYT
Trigger: CGTATACTTCAAGGGAGGCAAATACATGCAGGCGGT...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGTCCAGTCCAAGGGCCTaGTCACAGCATTCAACAGCT +
Preference number: 5 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGSSPRA*SQHSTA
Trigger: AGCTGTTGAATGCTGTGACAAGGCCCTTGGACTGGA...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCTACAAGCCTTTCTCATaGGCACTGTCCAGTCCAAGG +
Preference number: 5 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLYKPFS*ALSSPR
Trigger: CCTTGGACTGGACAGTGCCAATGAGAAAGGCTTGTA...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGAACTTCTTGAACATGTaGGCGTATATCCTGCGGTCC +
Preference number: 5 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWNFLNM*AYILRS
Trigger: GGACCGCAGGATATACGCCAACATGTTCAAGAAGTT...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCTTATTGGCCTCTTCCTaGGCATCCTGCTCTGCAAAC +
Preference number: 5 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLLLASS*ASCSAN
Trigger: GTTTGCAGAGCAGGATGCCAAGGAAGAGGCCAATAA...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCTTGCCCATTGCTTTATaGGCCTCTTCCTTGGCATCC +
Preference number: 5 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLLPIAL*ASSLAS
Trigger: GGATGCCAAGGAAGAGGCCAATAAAGCAATGGGCAA...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGGCACCCTGTAGTTATTaGCTCAGAACCACTCACACA +
Preference number: 5 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWAPCSY*LRTTHT
Trigger: TGTGTGAGTGGTTCTGAGCAAATAACTACAGGGTGC...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGTCCTCATATGCTGACTaGGCAATCCATATGCAGCCT +
Preference number: 5 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWSSYAD*AIHMQP
Trigger: AGGCTGCATATGGATTGCCAAGTCAGCATATGAGGA...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS TCA 90 bp TGTCAATTCCAATTGGAATGTCGTGGTCTTCTCCTTCGCCCACAGTaGATGCCACATCTCTGCAGTCAAACATCCTTCCACCACAGCGGC +
Preference number: 5 (lower is better)
Translates to: CQFQLECRGLLLRPQ*MPHLCSQTSFHHSG
Trigger: GCCGCTGTGGTGGAAGGATGTTTGACTGCAGAGATGTGGCATTCACTGTGGGCGAAGGAGAAGACCACGACATTCCAATTGGAATTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
ENST00000542713.1
CDS TCA 90 bp CCAGCACTTTCTCAAAGTCACCCTTGGCTGACTCAAACTCGTTCATaGGCAGCTGGGCTTCACCCCTCCTATACAAGCCTTTCTCATTGG +
Preference number: 5 (lower is better)
Translates to: PALSQSHPWLTQTRS*AAGLHPSYTSLSHW
Trigger: CCAATGAGAAAGGCTTGTATAGGAGGGGTGAAGCCCAGCTGCTCATGAACGAGTTTGAGTCAGCCAAGGGTGACTTTGAGAAAGTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS TCA 90 bp TTGCTTTATTGGCCTCTTCCTTGGCATCCTGCTCTGCAAACTTCTTaGACATGTTGGCGTATATCCTGCGGTCCCGCTCGTTGTGCTCCT +
Preference number: 5 (lower is better)
Translates to: LLYWPLPWHPALQTS*TCWRISCGPARCAP
Trigger: AGGAGCACAACGAGCGGGACCGCAGGATATACGCCAACATGTTCAAGAAGTTTGCAGAGCAGGATGCCAAGGAAGAGGCCAATAAAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS CCA 90 bp TTCTCAAAGTCACCCTTGGCTGACTCAAACTCGTTCATGAGCAGCTaGGCTTCACCCCTCCTATACAAGCCTTTCTCATTGGCACTGTCC +
Preference number: 5 (lower is better)
Translates to: FSKSPLADSNSFMSS*ASPLLYKPFSLALS
Trigger: GGACAGTGCCAATGAGAAAGGCTTGTATAGGAGGGGTGAAGCCCAGCTGCTCATGAACGAGTTTGAGTCAGCCAAGGGTGACTTTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GCAGATGGAGCATTTGGGGAGGGAATTAGGTTAGATGTGGTCATGAGGGTGGGGACTCCCCTGTCTTTTTaGGAGGTAATATCCTCTCCC +
Preference number: 5 (lower is better)
Translates to: ADGAFGEGIRLDVVMRVGTPLSF*EVISSP
Trigger: GGGAGAGGATATTACCTCCAAAAAAGACAGGGGAGT...CCCCACCCTCATGACCACATCTAACCTAATTCCCTCCCCAAATGCTCCATCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCCCATGCCTTGATGACTaGGCCTTTGCCAAGACTAAA +
Preference number: 5 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLPCLDD*AFAKTK
Trigger: TTTAGTCTTGGCAAAGGCCAAGTCATCAAGGCATGG...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GCAGATGGAGCATTTGGGGAGGGAATTAGGTTAGATGTGGTCATGAGGGTGGGGCCATGCCTTGATGACTaGGCCTTTGCCAAGACTAAA +
Preference number: 5 (lower is better)
Translates to: ADGAFGEGIRLDVVMRVGPCLDD*AFAKTK
Trigger: TTTAGTCTTGGCAAAGGCCAAGTCATCAAGGCATGG...CCCCACCCTCATGACCACATCTAACCTAATTCCCTCCCCAAATGCTCCATCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCTTCTCAAAGTCACCCTaGGCTGACTCAAACTCGTTC +
Preference number: 5 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLFSKSP*ADSNSF
Trigger: GAACGAGTTTGAGTCAGCCAAGGGTGACTTTGAGAA...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCCCTTCTGAAGTCTTCTaGCCCATTGCTTTATTGGCC +
Preference number: 5 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLPSEVF*PIALLA
Trigger: GGCCAATAAAGCAATGGGCAAGAAGACTTCAGAAGG...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GCTCCTGTCCTGCAGAACACTGTCAGCTATGAGGGCAAAAATCGTGTCTGTTTAGGGCAGTATGGCAGATaGAAACCTGCCCTGAGTTGG +
Preference number: 5 (lower is better)
Translates to: APVLQNTVSYEGKNRVCLGQYGR*KPALSW
Trigger: CCAACTCAGGGCAGGTTTCAATCTGCCATACTGCCC...TAAACAGACACGATTTTTGCCCTCATAGCTGACAGTGTTCTGCAGGACAGGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS TCA 90 bp GCGGCCTTCCAGGTGGATTTCTACTGTTGCTCCTTCGTTTGGATTTaGATATCCCTCTCCTTTCCGTTTGGTTCTCCGGATAATGCCTCC +
Preference number: 5 (lower is better)
Translates to: AAFQVDFYCCSFVWI*ISLSFPFGSPDNAS
Trigger: GGAGGCATTATCCGGAGAACCAAACGGAAAGGAGAGGGATATTCAAATCCAAACGAAGGAGCAACAGTAGAAATCCACCTGGAAGGCCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
ENST00000542713.1
CDS TCA 90 bp ATTCTGGGGGTTTACTTCCAGCACTTTCTCAAAGTCACCCTTGGCTaGCTCAAACTCGTTCATGAGCAGCTGGGCTTCACCCCTCCTATA +
Preference number: 5 (lower is better)
Translates to: ILGVYFQHFLKVTLG*LKLVHEQLGFTPPI
Trigger: TATAGGAGGGGTGAAGCCCAGCTGCTCATGAACGAGTTTGAGTCAGCCAAGGGTGACTTTGAGAAAGTGCTGGAAGTAAACCCCCAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS CCA 90 bp GCCTTTTTCTGGCACATGGAGATCTGCAGTCTTGCAGCCTTATTCTaGGGGTTTACTTCCAGCACTTTCTCAAAGTCACCCTTGGCTGAC +
Preference number: 5 (lower is better)
Translates to: AFFWHMEICSLAALF*GFTSSTFSKSPLAD
Trigger: GTCAGCCAAGGGTGACTTTGAGAAAGTGCTGGAAGTAAACCCCCAGAATAAGGCTGCAAGACTGCAGATCTCCATGTGCCAGAAAAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAAGTGGGGCTTTCTTCATaGTTCTTGGCACCTTCATCA +
Preference number: 5 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQVGLSS*FLAPSS
Trigger: TGATGAAGGTGCCAAGAACAATGAAGAAAGCCCCAC...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGACTCCCCTGTCTTTTTaGGAGGTAATATCCTCTCCC +
Preference number: 5 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGTPLSF*EVISSP
Trigger: GGGAGAGGATATTACCTCCAAAAAAGACAGGGGAGT...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCCCAATGTCCCATGCCTaGATGACTTGGCCTTTGCCA +
Preference number: 5 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTPMSHA*MTWPLP
Trigger: TGGCAAAGGCCAAGTCATCAAGGCATGGGACATTGG...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GCTCCTGTCCTGCAGAACACTGTCAGCTATGAGGGCAAAAATCGTGTCTGTTTACCCTCTCCTTTCCGTTaGGTTCTCCGGATAATGCCT +
Preference number: 5 (lower is better)
Translates to: APVLQNTVSYEGKNRVCLPSPFR*VLRIMP
Trigger: AGGCATTATCCGGAGAACCAAACGGAAAGGAGAGGG...TAAACAGACACGATTTTTGCCCTCATAGCTGACAGTGTTCTGCAGGACAGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGTGCTCCAATTTTTCTTaGGTATCCATCTCCCAGGAT +
Preference number: 5 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWCSNFS*VSISQD
Trigger: ATCCTGGGAGATGGATACCAAAGAAAAATTGGAGCA...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCATGTATTTGCCTCCCTaGAAGTATACGGTTCCCTTC +
Preference number: 5 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLMYLPP*KYTVPF
Trigger: GAAGGGAACCGTATACTTCAAGGGAGGCAAATACAT...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCAAGTCTTCTTGCCCATaGCTTTATTGGCCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLKSSCP*LYWPLP
Trigger: AGGAAGAGGCCAATAAAGCAATGGGCAAGAAGACTT...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAATCCTCATATGCTGACTaGGCAATCCATATGCAGCCT +
Preference number: 5 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQSSYAD*AIHMQP
Trigger: AGGCTGCATATGGATTGCCAAGTCAGCATATGAGGA...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GCAGATGGAGCATTTGGGGAGGGAATTAGGTTAGATGTGGTCATGAGGGTGGGGCTAAGCCCTTTCTGCTaGACATGGAGAAGGCATATA +
Preference number: 5 (lower is better)
Translates to: ADGAFGEGIRLDVVMRVGLSPFC*TWRRHI
Trigger: TATATGCCTTCTCCATGTCAAGCAGAAAGGGCTTAG...CCCCACCCTCATGACCACATCTAACCTAATTCCCTCCCCAAATGCTCCATCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS CCA 90 bp CGCTGCATTTTCTCCAGAGCTTTGTCAATTCCAATTGGAATGTCGTaGTCTTCTCCTTCGCCCACAGTGAATGCCACATCTCTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: RCIFSRALSIPIGMS*SSPSPTVNATSLQS
Trigger: TGACTGCAGAGATGTGGCATTCACTGTGGGCGAAGGAGAAGACCACGACATTCCAATTGGAATTGACAAAGCTCTGGAGAAAATGCAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
ENST00000542713.1
CDS-3UTR CAA 90 bp GGCAGATTGAAACCTGCCCTGAGTTGGGAAGGGAATATGTACAGGAAACTATCTCCAATGTCCCATGCCTaGATGACTTGGCCTTTGCCA +
Preference number: 5 (lower is better)
Translates to: GRLKPALSWEGNMYRKLSPMSHA*MTWPLP
Trigger: TGGCAAAGGCCAAGTCATCAAGGCATGGGACATTGG...AGATAGTTTCCTGTACATATTCCCTTCCCAACTCAGGGCAGGTTTCAATCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATACCCTCTCCTTTCCGTTaGGTTCTCCGGATAATGCCT +
Preference number: 5 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGIPSPFR*VLRIMP
Trigger: AGGCATTATCCGGAGAACCAAACGGAAAGGAGAGGG...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAACTGTTGCTCCTTCGTTaGGATTTGAATATCCCTCTC +
Preference number: 5 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQLLLLR*DLNIPL
Trigger: GAGAGGGATATTCAAATCCAAACGAAGGAGCAACAG...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGATCTCCCAGGATTCTTaGGCCTTTTCGAAGCTCTTA +
Preference number: 5 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGISQDS*AFSKLL
Trigger: TAAGAGCTTCGAAAAGGCCAAAGAATCCTGGGAGAT...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCTGCTCCAATTTTTCTTaGGTATCCATCTCCCAGGAT +
Preference number: 5 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLCSNFS*VSISQD
Trigger: ATCCTGGGAGATGGATACCAAAGAAAAATTGGAGCA...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAAATGTATTTGCCTCCCTaGAAGTATACGGTTCCCTTC +
Preference number: 5 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQMYLPP*KYTVPF
Trigger: GAAGGGAACCGTATACTTCAAGGGAGGCAAATACAT...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCCAGCATTCAACAGCTTaGGTGTATTCTCTAAGCTTC +
Preference number: 5 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLQHSTA*VYSLSF
Trigger: GAAGCTTAGAGAATACACCAAAGCTGTTGAATGCTG...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCTACAAGCCTTTCTCATaGGCACTGTCCAGTCCAAGG +
Preference number: 5 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTYKPFS*ALSSPR
Trigger: CCTTGGACTGGACAGTGCCAATGAGAAAGGCTTGTA...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCTGCTCTGCAAACTTCTaGAACATGTTGGCGTATATC +
Preference number: 5 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLCSANF*NMLAYI
Trigger: GATATACGCCAACATGTTCAAGAAGTTTGCAGAGCA...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCCTACTGTGGGTTCTGTaGGTTAAAAATGCAACAGAC +
Preference number: 5 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLLLWVL*VKNATD
Trigger: GTCTGTTGCATTTTTAACCAACAGAACCCACAGTAG...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAACAGCCTAAAAGGTGGTaGAAAGATGTCTGTGGACTT +
Preference number: 5 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQQPKRW*KDVCGL
Trigger: AAGTCCACAGACATCTTTCAACCACCTTTTAGGCTG...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGCAGCCTAAAAGGTGGTaGAAAGATGTCTGTGGACTT +
Preference number: 5 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGQPKRW*KDVCGL
Trigger: AAGTCCACAGACATCTTTCAACCACCTTTTAGGCTG...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GCTCCTGTCCTGCAGAACACTGTCAGCTATGAGGGCAAAAATCGTGTCTGTTTAAGGGACTCACACACCTaGAAGTATACGGTTCCCTTC +
Preference number: 5 (lower is better)
Translates to: APVLQNTVSYEGKNRVCLRDSHT*KYTVPF
Trigger: GAAGGGAACCGTATACTTCAAGGTGTGTGAGTCCCT...TAAACAGACACGATTTTTGCCCTCATAGCTGACAGTGTTCTGCAGGACAGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp GCTCCTGTCCTGCAGAACACTGTCAGCTATGAGGGCAAAAATCGTGTCTGTTTACTTGAGGCTAGAAGTTaGAGACCAGCCTGGGAAAGA +
Preference number: 5 (lower is better)
Translates to: APVLQNTVSYEGKNRVCLLEARS*RPAWER
Trigger: TCTTTCCCAGGCTGGTCTCAAACTTCTAGCCTCAAG...TAAACAGACACGATTTTTGCCCTCATAGCTGACAGTGTTCTGCAGGACAGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS GCA 90 bp CCTCCCTTGAAGTATACGGTTCCCTTCTCTTTGACAATGGCAGCCTaGTCCAATTTTTCTTTGGTATCCATCTCCCAGGATTCTTTGGCC +
Preference number: 5 (lower is better)
Translates to: PPLKYTVPFSLTMAA*SNFSLVSISQDSLA
Trigger: GGCCAAAGAATCCTGGGAGATGGATACCAAAGAAAAATTGGAGCAGGCTGCCATTGTCAAAGAGAAGGGAACCGTATACTTCAAGGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS CCA 90 bp TTGTTCTTCCCGCTGCATTTTCTCCAGAGCTTTGTCAATTCCAATTaGAATGTCGTGGTCTTCTCCTTCGCCCACAGTGAATGCCACATC +
Preference number: 5 (lower is better)
Translates to: LFFPLHFLQSFVNSN*NVVVFSFAHSECHI
Trigger: GATGTGGCATTCACTGTGGGCGAAGGAGAAGACCACGACATTCCAATTGGAATTGACAAAGCTCTGGAGAAAATGCAGCGGGAAGAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
ENST00000542713.1
CDS-3UTR CAA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCTTGATGACTTGGCCTTaGCCAAGACTAAAGACAAAT +
Preference number: 5 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLLMTWP*PRLKTN
Trigger: ATTTGTCTTTAGTCTTGGCAAAGGCCAAGTCATCAA...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACCCCTCTCCTTTCCGTTaGGTTCTCCGGATAATGCCT +
Preference number: 5 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNPSPFR*VLRIMP
Trigger: AGGCATTATCCGGAGAACCAAACGGAAAGGAGAGGG...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAACTTTGTCAATTCCAATaGGAATGTCGTGGTCTTCTC +
Preference number: 5 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQLCQFQ*ECRGLL
Trigger: GAGAAGACCACGACATTCCAATTGGAATTGACAAAG...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGTGCTCCAATTTTTCTTaGGTATCCATCTCCCAGGAT +
Preference number: 5 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGCSNFS*VSISQD
Trigger: ATCCTGGGAGATGGATACCAAAGAAAAATTGGAGCA...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGCAGCATTCAACAGCTTaGGTGTATTCTCTAAGCTTC +
Preference number: 5 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGQHSTA*VYSLSF
Trigger: GAAGCTTAGAGAATACACCAAAGCTGTTGAATGCTG...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATATACAAGCCTTTCTCATaGGCACTGTCCAGTCCAAGG +
Preference number: 5 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGIYKPFS*ALSSPR
Trigger: CCTTGGACTGGACAGTGCCAATGAGAAAGGCTTGTA...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCAACTTCTTGAACATGTaGGCGTATATCCTGCGGTCC +
Preference number: 5 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTNFLNM*AYILRS
Trigger: GGACCGCAGGATATACGCCAACATGTTCAAGAAGTT...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAACTCTTCTTCCATTGCTaGACTGTCTGTTCCTTTTTC +
Preference number: 5 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQLFFHC*TVCSFF
Trigger: GAAAAAGGAACAGACAGTCAAGCAATGGAAGAAGAG...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGGTTTCTCTTCTTCCATaGCTTGACTGTCTGTTCCTT +
Preference number: 5 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGVSLLP*LDCLFL
Trigger: AAGGAACAGACAGTCAAGCAATGGAAGAAGAGAAAC...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp ACACTGCTGTGGAACTGGGGAGACATGAGACCCCTCTACTGTGGGTTCTGTTGGAAGCAAAATCAGCTTTaGCTCTTCATATTTCGTAGG +
Preference number: 5 (lower is better)
Translates to: TLLWNWGDMRPLYCGFCWKQNQL*LFIFRR
Trigger: CCTACGAAATATGAAGAGCAAAAGCTGATTTTGCTT...CCAACAGAACCCACAGTAGAGGGGTCTCATGTCTCCCCAGTTCCACAGCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGTATCAAATTTCAATCTaGGCCTCACTGGAACCATGC +
Preference number: 5 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGYQISI*ASLEPC
Trigger: GCATGGTTCCAGTGAGGCCAAGATTGAAATTTGATA...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAATATCAAATTTCAATCTaGGCCTCACTGGAACCATGC +
Preference number: 5 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQYQISI*ASLEPC
Trigger: GCATGGTTCCAGTGAGGCCAAGATTGAAATTTGATA...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GCAGATGGAGCATTTGGGGAGGGAATTAGGTTAGATGTGGTCATGAGGGTGGGGCAGGATTCTTTGGCCTaGGTCCAAGATATAAAATAC +
Preference number: 5 (lower is better)
Translates to: ADGAFGEGIRLDVVMRVGQDSLA*VQDIKY
Trigger: GTATTTTATATCTTGGACCAAGGCCAAAGAATCCTG...CCCCACCCTCATGACCACATCTAACCTAATTCCCTCCCCAAATGCTCCATCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp GGCAGATTGAAACCTGCCCTGAGTTGGGAAGGGAATATGTACAGGAAACTATCTTCACTGCCTTTTCTCTaGCTGGTCTTTGAGGACAGG +
Preference number: 5 (lower is better)
Translates to: GRLKPALSWEGNMYRKLSSLPFL*LVFEDR
Trigger: CCTGTCCTCAAAGACCAGCAAGAGAAAAGGCAGTGA...AGATAGTTTCCTGTACATATTCCCTTCCCAACTCAGGGCAGGTTTCAATCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp GCTCCTGTCCTGCAGAACACTGTCAGCTATGAGGGCAAAAATCGTGTCTGTTTAGATCCTGCTAACACCTaGATCTGGGACTTACAGTCT +
Preference number: 5 (lower is better)
Translates to: APVLQNTVSYEGKNRVCLDPANT*IWDLQS
Trigger: AGACTGTAAGTCCCAGATCAAGGTGTTAGCAGGATC...TAAACAGACACGATTTTTGCCCTCATAGCTGACAGTGTTCTGCAGGACAGGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp AGGAATGTAAATATGGAATCAAGACTTTTTCTAAAGTGGTGTGGTGGCTCACGCAAGAAACTCGGGTGCTaGCTGCCCTCTGCCCTCTCT +
Preference number: 5 (lower is better)
Translates to: RNVNMESRLFLKWCGGSRKKLGC*LPSALS
Trigger: AGAGAGGGCAGAGGGCAGCAAGCACCCGAGTTTCTT...GCGTGAGCCACCACACCACTTTAGAAAAAGTCTTGATTCCATATTTACATTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATACCATGCCTTGATGACTaGGCCTTTGCCAAGACTAAA +
Preference number: 5 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGIPCLDD*AFAKTK
Trigger: TTTAGTCTTGGCAAAGGCCAAGTCATCAAGGCATGG...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCTATGCATATTCTGGTTaGCACAGTAAATGGCATATC +
Preference number: 5 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLYAYSG*HSKWHI
Trigger: GATATGCCATTTACTGTGCAAACCAGAATATGCATA...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GCTCCTGTCCTGCAGAACACTGTCAGCTATGAGGGCAAAAATCGTGTCTGTTTACTGTTGCTCCTTCGTTaGGATTTGAATATCCCTCTC +
Preference number: 5 (lower is better)
Translates to: APVLQNTVSYEGKNRVCLLLLLR*DLNIPL
Trigger: GAGAGGGATATTCAAATCCAAACGAAGGAGCAACAG...TAAACAGACACGATTTTTGCCCTCATAGCTGACAGTGTTCTGCAGGACAGGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGTGGATTTCTACTGTaGCTCCTTCGTTTGGATTTG +
Preference number: 5 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTGGFLL*LLRLDL
Trigger: CAAATCCAAACGAAGGAGCAACAGTAGAAATCCACC...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GGAATGACAGAATTACTCCCCCAGGGACAGGCTGTGTGTGGTAGAAAGCCACTCATTTTCTCCAGAGCTTaGTCAATTCCAATTGGAATG +
Preference number: 5 (lower is better)
Translates to: GMTELLPQGQAVCGRKPLIFSRA*SIPIGM
Trigger: CATTCCAATTGGAATTGACAAAGCTCTGGAGAAAAT...GAGTGGCTTTCTACCACACACAGCCTGTCCCTGGGGGAGTAATTCTGTCATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACACCGCCTGCATGTATTaGCCTCCCTTGAAGTATACG +
Preference number: 5 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNTACMY*PPLKYT
Trigger: CGTATACTTCAAGGGAGGCAAATACATGCAGGCGGT...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATAAACTTCTTGAACATGTaGGCGTATATCCTGCGGTCC +
Preference number: 5 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGINFLNM*AYILRS
Trigger: GGACCGCAGGATATACGCCAACATGTTCAAGAAGTT...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACTTATTGGCCTCTTCCTaGGCATCCTGCTCTGCAAAC +
Preference number: 5 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNLLASS*ASCSAN
Trigger: GTTTGCAGAGCAGGATGCCAAGGAAGAGGCCAATAA...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp AATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCGGCATGGGTACTGGTTTTGCCATTaGCTTCCAGAATCACATAGA +
Preference number: 5 (lower is better)
Translates to: NGQLKYWRFRLLAVYRHGYWFCH*LPESHR
Trigger: TCTATGTGATTCTGGAAGCAAATGGCAAAACCAGTA...CCCATGCCGGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATAGGGAAGCTACTGGTTTaGCCATTTGCTTCCAGAATC +
Preference number: 5 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGIGKLLV*PFASRI
Trigger: GATTCTGGAAGCAAATGGCAAAACCAGTAGCTTCCC...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACCACAGTCATTTCTGTTaGTTCCACCTGGAGTGGTCC +
Preference number: 5 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNHSHFC*FHLEWS
Trigger: GGACCACTCCAGGTGGAACAAACAGAAATGACTGTG...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAAATCTGCTCATTATCATaGCTGAAGGGTGTTTTAGGA +
Preference number: 5 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQICSLS*LKGVLG
Trigger: TCCTAAAACACCCTTCAGCAATGATAATGAGCAGAT...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATAGCACCCTGTAGTTATTaGCTCAGAACCACTCACACA +
Preference number: 5 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGIAPCSY*LRTTHT
Trigger: TGTGTGAGTGGTTCTGAGCAAATAACTACAGGGTGC...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp AGGAATATCCGGAGATTCCTCATAAAAGCAAGTGTGCAGGAATCATCTTGGCCAAGCGAAAAGTCTGTCTaGTACTCCCTGCTTCTGAGG +
Preference number: 5 (lower is better)
Translates to: RNIRRFLIKASVQESSWPSEKSV*YSLLLR
Trigger: CCTCAGAAGCAGGGAGTACAAGACAGACTTTTCGCT...TGGCCAAGATGATTCCTGCACACTTGCTTTTATGAGGAATCTCCGGATATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp AGGAATATCCGGAGATTCCTCATAAAAGCAAGTGTGCAGGAATCATCTTGGCCACATCTCACTGCCGAGTaGTCTCTCCCCACAAATACT +
Preference number: 5 (lower is better)
Translates to: RNIRRFLIKASVQESSWPHLTAE*SLPTNT
Trigger: AGTATTTGTGGGGAGAGACAACTCGGCAGTGAGATG...TGGCCAAGATGATTCCTGCACACTTGCTTTTATGAGGAATCTCCGGATATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp GCTCCTGTCCTGCAGAACACTGTCAGCTATGAGGGCAAAAATCGTGTCTGTTTACACAGCCAATCCTATTaGAACCAGTCTCTGTTGCAA +
Preference number: 5 (lower is better)
Translates to: APVLQNTVSYEGKNRVCLHSQSY*NQSLLQ
Trigger: TTGCAACAGAGACTGGTTCAAATAGGATTGGCTGTG...TAAACAGACACGATTTTTGCCCTCATAGCTGACAGTGTTCTGCAGGACAGGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCCTTTCTTCATTGTTCTaGGCACCTTCATCAGTAGTC +
Preference number: 5 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTLSSLF*APSSVV
Trigger: GACTACTGATGAAGGTGCCAAGAACAATGAAGAAAG...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACCCATGCCTTGATGACTaGGCCTTTGCCAAGACTAAA +
Preference number: 5 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNPCLDD*AFAKTK
Trigger: TTTAGTCTTGGCAAAGGCCAAGTCATCAAGGCATGG...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp AGCGAGCAACTGCGTGTCAAACCTGCAGGTGAAACCCCTAGTGTAGAAGAGCAAAATAAATCCTCTCCTTaGAAATCAAGGAGCTCAATC +
Preference number: 5 (lower is better)
Translates to: SEQLRVKPAGETPSVEEQNKSSP*KSRSSI
Trigger: GATTGAGCTCCTTGATTTCAAAGGAGAGGATTTATT...TTGCTCTTCTACACTAGGGGTTTCACCTGCAGGTTTGACACGCAGTTGCTCGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATAATCTCCCAGGATTCTTaGGCCTTTTCGAAGCTCTTA +
Preference number: 5 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGIISQDS*AFSKLL
Trigger: TAAGAGCTTCGAAAAGGCCAAAGAATCCTGGGAGAT...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGACGGTTCCCTTCTCTTaGACAATGGCAGCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: ASSESWNSFLVCYLQKARTVPFS*TMAACS
Trigger: GGAGCAGGCTGCCATTGTCAAAGAGAAGGGAACCGT...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGCGCTCGTTGTGCTCCTaGGCCTTTTTCTGGCACATG +
Preference number: 5 (lower is better)
Translates to: ASSESWNSFLVCYLQKARRSLCS*AFFWHM
Trigger: CATGTGCCAGAAAAAGGCCAAGGAGCACAACGAGCG...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATAAAGTCTTCTTGCCCATaGCTTTATTGGCCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGIKSSCP*LYWPLP
Trigger: AGGAAGAGGCCAATAAAGCAATGGGCAAGAAGACTT...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCTATCAAATTTCAATCTaGGCCTCACTGGAACCATGC +
Preference number: 5 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTYQISI*ASLEPC
Trigger: GCATGGTTCCAGTGAGGCCAAGATTGAAATTTGATA...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACGCACCCTGTAGTTATTaGCTCAGAACCACTCACACA +
Preference number: 5 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNAPCSY*LRTTHT
Trigger: TGTGTGAGTGGTTCTGAGCAAATAACTACAGGGTGC...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp AGGAATATCCGGAGATTCCTCATAAAAGCAAGTGTGCAGGAATCATCTTGGCCATTGAGATGGAAAGGATaGCATAGGGACTCACACACC +
Preference number: 5 (lower is better)
Translates to: RNIRRFLIKASVQESSWPLRWKG*HRDSHT
Trigger: GGTGTGTGAGTCCCTATGCAATCCTTTCCATCTCAA...TGGCCAAGATGATTCCTGCACACTTGCTTTTATGAGGAATCTCCGGATATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATACTTTCTTCATTGTTCTaGGCACCTTCATCAGTAGTC +
Preference number: 5 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGILSSLF*APSSVV
Trigger: GACTACTGATGAAGGTGCCAAGAACAATGAAGAAAG...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GGCAGATTGAAACCTGCCCTGAGTTGGGAAGGGAATATGTACAGGAAACTATCTCTTTCTTCATTGTTCTaGGCACCTTCATCAGTAGTC +
Preference number: 5 (lower is better)
Translates to: GRLKPALSWEGNMYRKLSLSSLF*APSSVV
Trigger: GACTACTGATGAAGGTGCCAAGAACAATGAAGAAAG...AGATAGTTTCCTGTACATATTCCCTTCCCAACTCAGGGCAGGTTTCAATCTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCTTGATGACTTGGCCTTaGCCAAGACTAAAGACAAAT +
Preference number: 5 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTLMTWP*PRLKTN
Trigger: ATTTGTCTTTAGTCTTGGCAAAGGCCAAGTCATCAA...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACCTGTTGCTCCTTCGTTaGGATTTGAATATCCCTCTC +
Preference number: 5 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNLLLLR*DLNIPL
Trigger: GAGAGGGATATTCAAATCCAAACGAAGGAGCAACAG...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATACTTTGTCAATTCCAATaGGAATGTCGTGGTCTTCTC +
Preference number: 5 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGILCQFQ*ECRGLL
Trigger: GAGAAGACCACGACATTCCAATTGGAATTGACAAAG...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GGCAGATTGAAACCTGCCCTGAGTTGGGAAGGGAATATGTACAGGAAACTATCTCTTTGTCAATTCCAATaGGAATGTCGTGGTCTTCTC +
Preference number: 5 (lower is better)
Translates to: GRLKPALSWEGNMYRKLSLCQFQ*ECRGLL
Trigger: GAGAAGACCACGACATTCCAATTGGAATTGACAAAG...AGATAGTTTCCTGTACATATTCCCTTCCCAACTCAGGGCAGGTTTCAATCTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp GTGAACCATAATACACACGTGGGAGACAGCTGGCATCATCTGAGTCTTGGAATAGTTTCTCTTCTTCCATaGCTTGACTGTCTGTTCCTT +
Preference number: 5 (lower is better)
Translates to: VNHNTHVGDSWHHLSLGIVSLLP*LDCLFL
Trigger: AAGGAACAGACAGTCAAGCAATGGAAGAAGAGAAAC...TATTCCAAGACTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCATCTGCTCATTATCATaGCTGAAGGGTGTTTTAGGA +
Preference number: 5 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTICSLS*LKGVLG
Trigger: TCCTAAAACACCCTTCAGCAATGATAATGAGCAGAT...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACCAGCCTAAAAGGTGGTaGAAAGATGTCTGTGGACTT +
Preference number: 5 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNQPKRW*KDVCGL
Trigger: AAGTCCACAGACATCTTTCAACCACCTTTTAGGCTG...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GGCAGATTGAAACCTGCCCTGAGTTGGGAAGGGAATATGTACAGGAAACTATCTTGTGCAGGAATCATCTaGGCCATTAGAAGCAATCAA +
Preference number: 5 (lower is better)
Translates to: GRLKPALSWEGNMYRKLSCAGII*AIRSNQ
Trigger: TTGATTGCTTCTAATGGCCAAGATGATTCCTGCACA...AGATAGTTTCCTGTACATATTCCCTTCCCAACTCAGGGCAGGTTTCAATCTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCTATGCATATTCTGGTTaGCACAGTAAATGGCATATC +
Preference number: 5 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTYAYSG*HSKWHI
Trigger: GATATGCCATTTACTGTGCAAACCAGAATATGCATA...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCAATAAATCCTCTCCTTaGAAATCAAGGAGCTCAATC +
Preference number: 5 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTNKSSP*KSRSSI
Trigger: GATTGAGCTCCTTGATTTCAAAGGAGAGGATTTATT...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GCTCCTGTCCTGCAGAACACTGTCAGCTATGAGGGCAAAAATCGTGTCTGTTTAAATAAATCCTCTCCTTaGAAATCAAGGAGCTCAATC +
Preference number: 5 (lower is better)
Translates to: APVLQNTVSYEGKNRVCLNKSSP*KSRSSI
Trigger: GATTGAGCTCCTTGATTTCAAAGGAGAGGATTTATT...TAAACAGACACGATTTTTGCCCTCATAGCTGACAGTGTTCTGCAGGACAGGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp CCTAGTTCAATGGTCAGCTCAAGTACTGGAGATTTAGGCTACTGGCTGTGTACCATTTTCTCCAGAGCTTaGTCAATTCCAATTGGAATG +
Preference number: 5 (lower is better)
Translates to: PSSMVSSSTGDLGYWLCTIFSRA*SIPIGM
Trigger: CATTCCAATTGGAATTGACAAAGCTCTGGAGAAAAT...GGTACACAGCCAGTAGCCTAAATCTCCAGTACTTGAGCTGACCATTGAACTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACCAGCATTCAACAGCTTaGGTGTATTCTCTAAGCTTC +
Preference number: 5 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNQHSTA*VYSLSF
Trigger: GAAGCTTAGAGAATACACCAAAGCTGTTGAATGCTG...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACTGCTCTGCAAACTTCTaGAACATGTTGGCGTATATC +
Preference number: 5 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNCSANF*NMLAYI
Trigger: GATATACGCCAACATGTTCAAGAAGTTTGCAGAGCA...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGTTATTGGCCTCTTCCTaGGCATCCTGCTCTGCAAAC +
Preference number: 5 (lower is better)
Translates to: ASSESWNSFLVCYLQKARLLASS*ASCSAN
Trigger: GTTTGCAGAGCAGGATGCCAAGGAAGAGGCCAATAA...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACCTCTTCTTCCATTGCTaGACTGTCTGTTCCTTTTTC +
Preference number: 5 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNLFFHC*TVCSFF
Trigger: GAAAAAGGAACAGACAGTCAAGCAATGGAAGAAGAG...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACGTTTCTCTTCTTCCATaGCTTGACTGTCTGTTCCTT +
Preference number: 5 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNVSLLP*LDCLFL
Trigger: AAGGAACAGACAGTCAAGCAATGGAAGAAGAGAAAC...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GCTCCTGTCCTGCAGAACACTGTCAGCTATGAGGGCAAAAATCGTGTCTGTTTATCATTCCAAAAACACTaGTTGAGTGCCAACTATGTA +
Preference number: 5 (lower is better)
Translates to: APVLQNTVSYEGKNRVCLSFQKH*LSANYV
Trigger: TACATAGTTGGCACTCAACAAGTGTTTTTGGAATGA...TAAACAGACACGATTTTTGCCCTCATAGCTGACAGTGTTCTGCAGGACAGGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp AGGAATATCCGGAGATTCCTCATAAAAGCAAGTGTGCAGGAATCATCTTGGCCAAAAACGAAAGAAACCTaGACAGAACTCCCATTCTCC +
Preference number: 5 (lower is better)
Translates to: RNIRRFLIKASVQESSWPKTKET*TELPFS
Trigger: GGAGAATGGGAGTTCTGTCAAGGTTTCTTTCGTTTT...TGGCCAAGATGATTCCTGCACACTTGCTTTTATGAGGAATCTCCGGATATTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp AGGAATGTAAATATGGAATCAAGACTTTTTCTAAAGTGGTGTGGTGGCTCACGCTCATTTGGATTAACATaGCCACTCCTCCCTCCTGAC +
Preference number: 5 (lower is better)
Translates to: RNVNMESRLFLKWCGGSRSFGLT*PLLPPD
Trigger: GTCAGGAGGGAGGAGTGGCAATGTTAATCCAAATGA...GCGTGAGCCACCACACCACTTTAGAAAAAGTCTTGATTCCATATTTACATTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp AATCCTAGAGTCATAAACGGCTTGTTTCTAAATCACATTACTGGTATCTTGGAATGTAATCCCAGCACTTaGGAGGCCGAGACAGGTGGA +
Preference number: 5 (lower is better)
Translates to: NPRVINGLFLNHITGILECNPST*EAETGG
Trigger: TCCACCTGTCTCGGCCTCCAAAGTGCTGGGATTACA...TTCCAAGATACCAGTAATGTGATTTAGAAACAAGCCGTTTATGACTCTAGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACTTGATGACTTGGCCTTaGCCAAGACTAAAGACAAAT +
Preference number: 5 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNLMTWP*PRLKTN
Trigger: ATTTGTCTTTAGTCTTGGCAAAGGCCAAGTCATCAA...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp AGGAATATCCGGAGATTCCTCATAAAAGCAAGTGTGCAGGAATCATCTTGGCCATTGATGACTTGGCCTTaGCCAAGACTAAAGACAAAT +
Preference number: 5 (lower is better)
Translates to: RNIRRFLIKASVQESSWPLMTWP*PRLKTN
Trigger: ATTTGTCTTTAGTCTTGGCAAAGGCCAAGTCATCAA...TGGCCAAGATGATTCCTGCACACTTGCTTTTATGAGGAATCTCCGGATATTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp GGCAGATTGAAACCTGCCCTGAGTTGGGAAGGGAATATGTACAGGAAACTATCTTATGCATATTCTGGTTaGCACAGTAAATGGCATATC +
Preference number: 5 (lower is better)
Translates to: GRLKPALSWEGNMYRKLSYAYSG*HSKWHI
Trigger: GATATGCCATTTACTGTGCAAACCAGAATATGCATA...AGATAGTTTCCTGTACATATTCCCTTCCCAACTCAGGGCAGGTTTCAATCTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGTTCTCAAAGTCACCCTaGGCTGACTCAAACTCGTTC +
Preference number: 5 (lower is better)
Translates to: ASSESWNSFLVCYLQKARFSKSP*ADSNSF
Trigger: GAACGAGTTTGAGTCAGCCAAGGGTGACTTTGAGAA...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGGGGAAGCTACTGGTTTaGCCATTTGCTTCCAGAATC +
Preference number: 5 (lower is better)
Translates to: ASSESWNSFLVCYLQKARGKLLV*PFASRI
Trigger: GATTCTGGAAGCAAATGGCAAAACCAGTAGCTTCCC...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp AGGAATGTAAATATGGAATCAAGACTTTTTCTAAAGTGGTGTGGTGGCTCACGCGTCTGTTTAACTCGCTaGCACAATGCCTGGCTTAAT +
Preference number: 5 (lower is better)
Translates to: RNVNMESRLFLKWCGGSRVCLTR*HNAWLN
Trigger: ATTAAGCCAGGCATTGTGCAAGCGAGTTAAACAGAC...GCGTGAGCCACCACACCACTTTAGAAAAAGTCTTGATTCCATATTTACATTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp AGGAATGTAAATATGGAATCAAGACTTTTTCTAAAGTGGTGTGGTGGCTCACGCCCATTCCCCACTCTTTaGACAATCTTTAATACTCCC +
Preference number: 5 (lower is better)
Translates to: RNVNMESRLFLKWCGGSRPFPTL*TIFNTP
Trigger: GGGAGTATTAAAGATTGTCAAAAGAGTGGGGAATGG...GCGTGAGCCACCACACCACTTTAGAAAAAGTCTTGATTCCATATTTACATTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACTATGCATATTCTGGTTaGCACAGTAAATGGCATATC +
Preference number: 5 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNYAYSG*HSKWHI
Trigger: GATATGCCATTTACTGTGCAAACCAGAATATGCATA...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp ATCAAATTTCAATCTTGGCCTCACTGGAACCATGCTCTACAGAGCTTTCCCAACAATAAATCCTCTCCTTaGAAATCAAGGAGCTCAATC +
Preference number: 5 (lower is better)
Translates to: IKFQSWPHWNHALQSFPNNKSSP*KSRSSI
Trigger: GATTGAGCTCCTTGATTTCAAAGGAGAGGATTTATT...GTTGGGAAAGCTCTGTAGAGCATGGTTCCAGTGAGGCCAAGATTGAAATTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGGGTGGATTTCTACTGTaGCTCCTTCGTTTGGATTTG +
Preference number: 5 (lower is better)
Translates to: ASSESWNSFLVCYLQKARGGFLL*LLRLDL
Trigger: CAAATCCAAACGAAGGAGCAACAGTAGAAATCCACC...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp AGGAATGTAAATATGGAATCAAGACTTTTTCTAAAGTGGTGTGGTGGCTCACGCTGCTCCAATTTTTCTTaGGTATCCATCTCCCAGGAT +
Preference number: 5 (lower is better)
Translates to: RNVNMESRLFLKWCGGSRCSNFS*VSISQD
Trigger: ATCCTGGGAGATGGATACCAAAGAAAAATTGGAGCA...GCGTGAGCCACCACACCACTTTAGAAAAAGTCTTGATTCCATATTTACATTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGAAGTCTTCTTGCCCATaGCTTTATTGGCCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: ASSESWNSFLVCYLQKARKSSCP*LYWPLP
Trigger: AGGAAGAGGCCAATAAAGCAATGGGCAAGAAGACTT...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp AGGAATGTAAATATGGAATCAAGACTTTTTCTAAAGTGGTGTGGTGGCTCACGCAGAAGTAAATTCCTGTaGTTGAAGCCACCCAGTGTA +
Preference number: 5 (lower is better)
Translates to: RNVNMESRLFLKWCGGSRRSKFL*LKPPSV
Trigger: TACACTGGGTGGCTTCAACAACAGGAATTTACTTCT...GCGTGAGCCACCACACCACTTTAGAAAAAGTCTTGATTCCATATTTACATTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGCCATTCCCCACTCTTTaGACAATCTTTAATACTCCC +
Preference number: 5 (lower is better)
Translates to: ASSESWNSFLVCYLQKARPFPTL*TIFNTP
Trigger: GGGAGTATTAAAGATTGTCAAAAGAGTGGGGAATGG...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGCTCTTCTTCCATTGCTaGACTGTCTGTTCCTTTTTC +
Preference number: 5 (lower is better)
Translates to: ASSESWNSFLVCYLQKARLFFHC*TVCSFF
Trigger: GAAAAAGGAACAGACAGTCAAGCAATGGAAGAAGAG...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGCTACTGTGGGTTCTGTaGGTTAAAAATGCAACAGAC +
Preference number: 5 (lower is better)
Translates to: ASSESWNSFLVCYLQKARLLWVL*VKNATD
Trigger: GTCTGTTGCATTTTTAACCAACAGAACCCACAGTAG...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp AGGAATGTAAATATGGAATCAAGACTTTTTCTAAAGTGGTGTGGTGGCTCACGCATCCCACTCCAAATGTaGATAGTACTGAGGTTGAAA +
Preference number: 5 (lower is better)
Translates to: RNVNMESRLFLKWCGGSRIPLQM*IVLRLK
Trigger: TTTCAACCTCAGTACTATCAACATTTGGAGTGGGAT...GCGTGAGCCACCACACCACTTTAGAAAAAGTCTTGATTCCATATTTACATTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp AATCCTAGAGTCATAAACGGCTTGTTTCTAAATCACATTACTGGTATCTTGGAAGGTGGATTTCTACTGTaGCTCCTTCGTTTGGATTTG +
Preference number: 5 (lower is better)
Translates to: NPRVINGLFLNHITGILEGGFLL*LLRLDL
Trigger: CAAATCCAAACGAAGGAGCAACAGTAGAAATCCACC...TTCCAAGATACCAGTAATGTGATTTAGAAACAAGCCGTTTATGACTCTAGGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp AATCCTAGAGTCATAAACGGCTTGTTTCTAAATCACATTACTGGTATCTTGGAAATCTCCCAGGATTCTTaGGCCTTGGTCCAAGATATA +
Preference number: 5 (lower is better)
Translates to: NPRVINGLFLNHITGILEISQDS*ALVQDI
Trigger: TATATCTTGGACCAAGGCCAAAGAATCCTGGGAGAT...TTCCAAGATACCAGTAATGTGATTTAGAAACAAGCCGTTTATGACTCTAGGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp AATCCTAGAGTCATAAACGGCTTGTTTCTAAATCACATTACTGGTATCTTGGAACTGTACAGACACTCATaGCTTTCTGCTACTGATCAC +
Preference number: 5 (lower is better)
Translates to: NPRVINGLFLNHITGILELYRHS*LSATDH
Trigger: GTGATCAGTAGCAGAAAGCAATGAGTGTCTGTACAG...TTCCAAGATACCAGTAATGTGATTTAGAAACAAGCCGTTTATGACTCTAGGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp AATCCTAGAGTCATAAACGGCTTGTTTCTAAATCACATTACTGGTATCTTGGAAAGTAAATTCCTGTTGTaGAAGCCACCCAGTGTATGG +
Preference number: 5 (lower is better)
Translates to: NPRVINGLFLNHITGILESKFLL*KPPSVW
Trigger: CCATACACTGGGTGGCTTCAACAACAGGAATTTACT...TTCCAAGATACCAGTAATGTGATTTAGAAACAAGCCGTTTATGACTCTAGGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp GCATCATCTGAGTCTTGGAATAGCTTTCTTGTTTGTTATCTGCAAAAAGCTAGGATTTTCTCCAGAGCTTaGTCAATTCCAATTGGAATG +
Preference number: 5 (lower is better)
Translates to: ASSESWNSFLVCYLQKARIFSRA*SIPIGM
Trigger: CATTCCAATTGGAATTGACAAAGCTCTGGAGAAAAT...CCTAGCTTTTTGCAGATAACAAACAAGAAAGCTATTCCAAGACTCAGATGATGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS-3UTR CAA 90 bp AATCCTAGAGTCATAAACGGCTTGTTTCTAAATCACATTACTGGTATCTTGGAAATTGTCCTCTCCCTTTaGGAATATTCAGGGTTTAGC +
Preference number: 5 (lower is better)
Translates to: NPRVINGLFLNHITGILEIVLSL*EYSGFS
Trigger: GCTAAACCCTGAATATTCCAAAAGGGAGAGGACAAT...TTCCAAGATACCAGTAATGTGATTTAGAAACAAGCCGTTTATGACTCTAGGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp AATCCTAGAGTCATAAACGGCTTGTTTCTAAATCACATTACTGGTATCTTGGAATCCTGTCAGTTTGTTTaGAAATTTGTGCATGTCCTC +
Preference number: 5 (lower is better)
Translates to: NPRVINGLFLNHITGILESCQFV*KFVHVL
Trigger: GAGGACATGCACAAATTTCAAAACAAACTGACAGGA...TTCCAAGATACCAGTAATGTGATTTAGAAACAAGCCGTTTATGACTCTAGGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp AATCCTAGAGTCATAAACGGCTTGTTTCTAAATCACATTACTGGTATCTTGGAAATTTTCTCCAGAGCTTaGTCAATTCCAATTGGAATG +
Preference number: 5 (lower is better)
Translates to: NPRVINGLFLNHITGILEIFSRA*SIPIGM
Trigger: CATTCCAATTGGAATTGACAAAGCTCTGGAGAAAAT...TTCCAAGATACCAGTAATGTGATTTAGAAACAAGCCGTTTATGACTCTAGGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS-3UTR CAA 90 bp AATCCTAGAGTCATAAACGGCTTGTTTCTAAATCACATTACTGGTATCTTGGAACATCTAATTTCTGTATaGCAGTGGCAGAAAACGAAA +
Preference number: 5 (lower is better)
Translates to: NPRVINGLFLNHITGILEHLISV*QWQKTK
Trigger: TTTCGTTTTCTGCCACTGCAATACAGAAATTAGATG...TTCCAAGATACCAGTAATGTGATTTAGAAACAAGCCGTTTATGACTCTAGGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS GCA 72 bp GGGGCTCGCCGACTCCGTCACTCTCCGCCTTGCCCGTaGTCCGCTAACCCTTCAGCCCGCCCAGCAGGCCGC +
Preference number: 6 (lower is better)
Translates to: GARRLRHSPPCP*SANPSARPAGR
Trigger: GCGGCCTGCTGGGCGGGCTGAAGGGTTAGCGGAGCACGGGCAAGGCGGAGAGTGACGGAGTCGGCGAGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000539068.5
ENST00000542713.1
CDS GCA 72 bp GGGTCGGAGAGTCTAGCCTTCTGCAGCGTGGCTGCCTaGCCCTCGGGGGCTCCTTGCACACACAGGGCTGGG +
Preference number: 6 (lower is better)
Translates to: GSESLAFCSVAA*PSGAPCTHRAG
Trigger: CCCAGCCCTGTGTGTGCAAGGAGCCCCCGAGGGGCAGGCAGCCACGCTGCAGAAGGCTAGACTCTCCGACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536438.5
CDS CCA 72 bp TGCCTGCCCCTCGGGGGCTCCTTGCACACACAGGGCTaGGGATTGTCGCTTCGTAGTCCCTGTCTCTGTCTG +
Preference number: 6 (lower is better)
Translates to: CLPLGGSLHTQG*GLSLRSPCLCL
Trigger: CAGACAGAGACAGGGACTACGAAGCGACAATCCCCAGCCCTGTGTGTGCAAGGAGCCCCCGAGGGGCAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536438.5
CDS TCA 72 bp GTCTCTGTCTGGCTTCCGCTCTGCCCAAAGAGAATGTaGGGTCCTCAAGGGTGGGCGCAGTCCGGCAGCGAG +
Preference number: 6 (lower is better)
Translates to: VSVWLPLCPKRM*GPQGWAQSGSE
Trigger: CTCGCTGCCGGACTGCGCCCACCCTTGAGGACCTCACATTCTCTTTGGGCAGAGCGGAAGCCAGACAGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536438.5
CDS CCA 72 bp GGGGCCGAGTTCACTGGGACTCTTCCCTCCTTGGCGTaGCGTCATACGTGGCCCTCAGGTTTCTCTTCTTCC +
Preference number: 6 (lower is better)
Translates to: GAEFTGTLPSLA*RHTWPSGFSSS
Trigger: GGAAGAAGAGAAACCTGAGGGCCACGTATGACGCCACGCCAAGGAGGGAAGAGTCCCAGTGAACTCGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS CCA 72 bp GAGGAGGGGCCGAGTTCACTGGGACTCTTCCCTCCTTaGCGTGGCGTCATACGTGGCCCTCAGGTTTCTCTT +
Preference number: 6 (lower is better)
Translates to: EEGPSSLGLFPP*RGVIRGPQVSL
Trigger: AAGAGAAACCTGAGGGCCACGTATGACGCCACGCCAAGGAGGGAAGAGTCCCAGTGAACTCGGCCCCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS CCA 72 bp CTGCGGTCCCGCTCGTTGTGCTCCTTGGCCTTTTTCTaGCACATGGAGATCTGCAGTCTTGCAGCCTTATTC +
Preference number: 6 (lower is better)
Translates to: LRSRSLCSLAFF*HMEICSLAALF
Trigger: GAATAAGGCTGCAAGACTGCAGATCTCCATGTGCCAGAAAAAGGCCAAGGAGCACAACGAGCGGGACCGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS CCA 72 bp TGGCGTATATCCTGCGGTCCCGCTCGTTGTGCTCCTTaGCCTTTTTCTGGCACATGGAGATCTGCAGTCTTG +
Preference number: 6 (lower is better)
Translates to: WRISCGPARCAP*PFSGTWRSAVL
Trigger: CAAGACTGCAGATCTCCATGTGCCAGAAAAAGGCCAAGGAGCACAACGAGCGGGACCGCAGGATATACGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS TCA 72 bp TGGCCTCTTCCTTGGCATCCTGCTCTGCAAACTTCTTaGACATGTTGGCGTATATCCTGCGGTCCCGCTCGT +
Preference number: 6 (lower is better)
Translates to: WPLPWHPALQTS*TCWRISCGPAR
Trigger: ACGAGCGGGACCGCAGGATATACGCCAACATGTTCAAGAAGTTTGCAGAGCAGGATGCCAAGGAAGAGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS CAA 72 bp AGCTGGGCTTCACCCCTCCTATACAAGCCTTTCTCATaGGCACTGTCCAGTCCAAGGGCCTTGTCACAGCAT +
Preference number: 6 (lower is better)
Translates to: SWASPLLYKPFS*ALSSPRALSQH
Trigger: ATGCTGTGACAAGGCCCTTGGACTGGACAGTGCCAATGAGAAAGGCTTGTATAGGAGGGGTGAAGCCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS CAA 72 bp TTGGCGTATATCCTGCGGTCCCGCTCGTTGTGCTCCTaGGCCTTTTTCTGGCACATGGAGATCTGCAGTCTT +
Preference number: 6 (lower is better)
Translates to: LAYILRSRSLCS*AFFWHMEICSL
Trigger: AAGACTGCAGATCTCCATGTGCCAGAAAAAGGCCAAGGAGCACAACGAGCGGGACCGCAGGATATACGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS CAA 72 bp TCCTTGGCATCCTGCTCTGCAAACTTCTTGAACATGTaGGCGTATATCCTGCGGTCCCGCTCGTTGTGCTCC +
Preference number: 6 (lower is better)
Translates to: SLASCSANFLNM*AYILRSRSLCS
Trigger: GGAGCACAACGAGCGGGACCGCAGGATATACGCCAACATGTTCAAGAAGTTTGCAGAGCAGGATGCCAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS CAA 72 bp TTGGCCTCTTCCTTGGCATCCTGCTCTGCAAACTTCTaGAACATGTTGGCGTATATCCTGCGGTCCCGCTCG +
Preference number: 6 (lower is better)
Translates to: LASSLASCSANF*NMLAYILRSRS
Trigger: CGAGCGGGACCGCAGGATATACGCCAACATGTTCAAGAAGTTTGCAGAGCAGGATGCCAAGGAAGAGGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS CAA 90 bp TTGGCCTCTTCCTTGGCATCCTGCTCTGCAAACTTCTTGAACATGTaGGCGTATATCCTGCGGTCCCGCTCGTTGTGCTCCTTGGCCTTT +
Preference number: 6 (lower is better)
Translates to: LASSLASCSANFLNM*AYILRSRSLCSLAF
Trigger: AAAGGCCAAGGAGCACAACGAGCGGGACCGCAGGATATACGCCAACATGTTCAAGAAGTTTGCAGAGCAGGATGCCAAGGAAGAGGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS CAA 90 bp TTCATGAGCAGCTGGGCTTCACCCCTCCTATACAAGCCTTTCTCATaGGCACTGTCCAGTCCAAGGGCCTTGTCACAGCATTCAACAGCT +
Preference number: 6 (lower is better)
Translates to: FMSSWASPLLYKPFS*ALSSPRALSQHSTA
Trigger: AGCTGTTGAATGCTGTGACAAGGCCCTTGGACTGGACAGTGCCAATGAGAAAGGCTTGTATAGGAGGGGTGAAGCCCAGCTGCTCATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS CAA 90 bp GCCTTATTCTGGGGGTTTACTTCCAGCACTTTCTCAAAGTCACCCTaGGCTGACTCAAACTCGTTCATGAGCAGCTGGGCTTCACCCCTC +
Preference number: 6 (lower is better)
Translates to: ALFWGFTSSTFSKSP*ADSNSFMSSWASPL
Trigger: GAGGGGTGAAGCCCAGCTGCTCATGAACGAGTTTGAGTCAGCCAAGGGTGACTTTGAGAAAGTGCTGGAAGTAAACCCCCAGAATAAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS CAA 90 bp TTGAACATGTTGGCGTATATCCTGCGGTCCCGCTCGTTGTGCTCCTaGGCCTTTTTCTGGCACATGGAGATCTGCAGTCTTGCAGCCTTA +
Preference number: 6 (lower is better)
Translates to: LNMLAYILRSRSLCS*AFFWHMEICSLAAL
Trigger: TAAGGCTGCAAGACTGCAGATCTCCATGTGCCAGAAAAAGGCCAAGGAGCACAACGAGCGGGACCGCAGGATATACGCCAACATGTTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS CAA 90 bp GCAAACTTCTTGAACATGTTGGCGTATATCCTGCGGTCCCGCTCGTaGTGCTCCTTGGCCTTTTTCTGGCACATGGAGATCTGCAGTCTT +
Preference number: 6 (lower is better)
Translates to: ANFLNMLAYILRSRS*CSLAFFWHMEICSL
Trigger: AAGACTGCAGATCTCCATGTGCCAGAAAAAGGCCAAGGAGCACAACGAGCGGGACCGCAGGATATACGCCAACATGTTCAAGAAGTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS CAA 90 bp ATTGCTTTATTGGCCTCTTCCTTGGCATCCTGCTCTGCAAACTTCTaGAACATGTTGGCGTATATCCTGCGGTCCCGCTCGTTGTGCTCC +
Preference number: 6 (lower is better)
Translates to: IALLASSLASCSANF*NMLAYILRSRSLCS
Trigger: GGAGCACAACGAGCGGGACCGCAGGATATACGCCAACATGTTCAAGAAGTTTGCAGAGCAGGATGCCAAGGAAGAGGCCAATAAAGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS TCA 72 bp TCTCAAAGTCACCCTTGGCTGACTCAAACTCGTTCATaGGCAGCTGGGCTTCACCCCTCCTATACAAGCCTT +
Preference number: 6 (lower is better)
Translates to: SQSHPWLTQTRS*AAGLHPSYTSL
Trigger: AAGGCTTGTATAGGAGGGGTGAAGCCCAGCTGCTCATGAACGAGTTTGAGTCAGCCAAGGGTGACTTTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS CCA 72 bp TCACCCTTGGCTGACTCAAACTCGTTCATGAGCAGCTaGGCTTCACCCCTCCTATACAAGCCTTTCTCATTG +
Preference number: 6 (lower is better)
Translates to: SPLADSNSFMSS*ASPLLYKPFSL
Trigger: CAATGAGAAAGGCTTGTATAGGAGGGGTGAAGCCCAGCTGCTCATGAACGAGTTTGAGTCAGCCAAGGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS CAA 72 bp TGGGGGTTTACTTCCAGCACTTTCTCAAAGTCACCCTaGGCTGACTCAAACTCGTTCATGAGCAGCTGGGCT +
Preference number: 6 (lower is better)
Translates to: WGFTSSTFSKSP*ADSNSFMSSWA
Trigger: AGCCCAGCTGCTCATGAACGAGTTTGAGTCAGCCAAGGGTGACTTTGAGAAAGTGCTGGAAGTAAACCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS TCA 72 bp GTTTACTTCCAGCACTTTCTCAAAGTCACCCTTGGCTaGCTCAAACTCGTTCATGAGCAGCTGGGCTTCACC +
Preference number: 6 (lower is better)
Translates to: VYFQHFLKVTLG*LKLVHEQLGFT
Trigger: GGTGAAGCCCAGCTGCTCATGAACGAGTTTGAGTCAGCCAAGGGTGACTTTGAGAAAGTGCTGGAAGTAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS CCA 72 bp TGGCACATGGAGATCTGCAGTCTTGCAGCCTTATTCTaGGGGTTTACTTCCAGCACTTTCTCAAAGTCACCC +
Preference number: 6 (lower is better)
Translates to: WHMEICSLAALF*GFTSSTFSKSP
Trigger: GGGTGACTTTGAGAAAGTGCTGGAAGTAAACCCCCAGAATAAGGCTGCAAGACTGCAGATCTCCATGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS GCA 72 bp CTTGGCCTTTTTCTGGCACATGGAGATCTGCAGTCTTaGAGCCTTATTCTGGGGGTTTACTTCCAGCACTTT +
Preference number: 6 (lower is better)
Translates to: LGLFLAHGDLQS*SLILGVYFQHF
Trigger: AAAGTGCTGGAAGTAAACCCCCAGAATAAGGCTGCAAGACTGCAGATCTCCATGTGCCAGAAAAAGGCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS CCA 72 bp CCGCTGCATTTTCTCCAGAGCTTTGTCAATTCCAATTaGAATGTCGTGGTCTTCTCCTTCGCCCACAGTGAA +
Preference number: 6 (lower is better)
Translates to: PLHFLQSFVNSN*NVVVFSFAHSE
Trigger: TTCACTGTGGGCGAAGGAGAAGACCACGACATTCCAATTGGAATTGACAAAGCTCTGGAGAAAATGCAGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
ENST00000542713.1
CDS GCA 72 bp CATTGCTTTATTGGCCTCTTCCTTGGCATCCTGCTCTaGAAACTTCTTGAACATGTTGGCGTATATCCTGCG +
Preference number: 6 (lower is better)
Translates to: HCFIGLFLGILL*KLLEHVGVYPA
Trigger: CGCAGGATATACGCCAACATGTTCAAGAAGTTTGCAGAGCAGGATGCCAAGGAAGAGGCCAATAAAGCAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS CCA 72 bp TTCTCCAGAGCTTTGTCAATTCCAATTGGAATGTCGTaGTCTTCTCCTTCGCCCACAGTGAATGCCACATCT +
Preference number: 6 (lower is better)
Translates to: FSRALSIPIGMS*SSPSPTVNATS
Trigger: AGATGTGGCATTCACTGTGGGCGAAGGAGAAGACCACGACATTCCAATTGGAATTGACAAAGCTCTGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
ENST00000542713.1
CDS CAA 72 bp CCTTTCTTCATGGTAGCCACCCCAATGTCCCATGCCTaGATGACTTGGCCTTTGCCAAGACTAAAGACAAAT +
Preference number: 6 (lower is better)
Translates to: PFFMVATPMSHA*MTWPLPRLKTN
Trigger: ATTTGTCTTTAGTCTTGGCAAAGGCCAAGTCATCAAGGCATGGGACATTGGGGTGGCTACCATGAAGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
ENST00000542713.1
CDS CAA 72 bp CCAGGTGGATTTCTACTGTTGCTCCTTCGTTTGGATTaGAATATCCCTCTCCTTTCCGTTTGGTTCTCCGGA +
Preference number: 6 (lower is better)
Translates to: PGGFLLLLLRLD*NIPLLSVWFSG
Trigger: TCCGGAGAACCAAACGGAAAGGAGAGGGATATTCAAATCCAAACGAAGGAGCAACAGTAGAAATCCACCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
ENST00000542713.1
CDS CAA 72 bp GGCCTTCCAGGTGGATTTCTACTGTTGCTCCTTCGTTaGGATTTGAATATCCCTCTCCTTTCCGTTTGGTTC +
Preference number: 6 (lower is better)
Translates to: GLPGGFLLLLLR*DLNIPLLSVWF
Trigger: GAACCAAACGGAAAGGAGAGGGATATTCAAATCCAAACGAAGGAGCAACAGTAGAAATCCACCTGGAAGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
ENST00000542713.1
CDS CAA 90 bp ACGGTTCCCTTCTCTTTGACAATGGCAGCCTGCTCCAATTTTTCTTaGGTATCCATCTCCCAGGATTCTTTGGCCTTGGTCCAAGATATA +
Preference number: 6 (lower is better)
Translates to: TVPFSLTMAACSNFS*VSISQDSLALVQDI
Trigger: TATATCTTGGACCAAGGCCAAAGAATCCTGGGAGATGGATACCAAAGAAAAATTGGAGCAGGCTGCCATTGTCAAAGAGAAGGGAACCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS TCA 72 bp CAGGTGGATTTCTACTGTTGCTCCTTCGTTTGGATTTaGATATCCCTCTCCTTTCCGTTTGGTTCTCCGGAT +
Preference number: 6 (lower is better)
Translates to: QVDFYCCSFVWI*ISLSFPFGSPD
Trigger: ATCCGGAGAACCAAACGGAAAGGAGAGGGATATTCAAATCCAAACGAAGGAGCAACAGTAGAAATCCACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
ENST00000542713.1
CDS CAA 72 bp GTTCCTTTTTCATTAGTGACCCCTTCTGAAGTCTTCTaGCCCATTGCTTTATTGGCCTCTTCCTTGGCATCC +
Preference number: 6 (lower is better)
Translates to: VPFSLVTPSEVF*PIALLASSLAS
Trigger: GGATGCCAAGGAAGAGGCCAATAAAGCAATGGGCAAGAAGACTTCAGAAGGGGTCACTAATGAAAAAGGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
CDS CAA 90 bp ATAAATTCTTTGAGATGGAAAGGATTGCATAGGGACTCACACACCTaGAAGTATACGGTTCCCTTCTCTTTGACAATGGCAGCCTGCTCC +
Preference number: 6 (lower is better)
Translates to: INSLRWKGLHRDSHT*KYTVPFSLTMAACS
Trigger: GGAGCAGGCTGCCATTGTCAAAGAGAAGGGAACCGTATACTTCAAGGTGTGTGAGTCCCTATGCAATCCTTTCCATCTCAAAGAATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS CAA 72 bp GACTCACACACCTTGAAGTATACGGTTCCCTTCTCTTaGACAATGGCAGCCTGCTCCAATTTTTCTTTGGTA +
Preference number: 6 (lower is better)
Translates to: DSHTLKYTVPFS*TMAACSNFSLV
Trigger: TACCAAAGAAAAATTGGAGCAGGCTGCCATTGTCAAAGAGAAGGGAACCGTATACTTCAAGGTGTGTGAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS CAA 72 bp TTGAGATGGAAAGGATTGCATAGGGACTCACACACCTaGAAGTATACGGTTCCCTTCTCTTTGACAATGGCA +
Preference number: 6 (lower is better)
Translates to: LRWKGLHRDSHT*KYTVPFSLTMA
Trigger: TGCCATTGTCAAAGAGAAGGGAACCGTATACTTCAAGGTGTGTGAGTCCCTATGCAATCCTTTCCATCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542713.1
CDS CAA 90 bp ACTGTTGCTCCTTCGTTTGGATTTGAATATCCCTCTCCTTTCCGTTaGGTTCTCCGGATAATGCCTCCATCTTCAAATAAATCCTCTCCT +
Preference number: 6 (lower is better)
Translates to: TVAPSFGFEYPSPFR*VLRIMPPSSNKSSP
Trigger: AGGAGAGGATTTATTTGAAGATGGAGGCATTATCCGGAGAACCAAACGGAAAGGAGAGGGATATTCAAATCCAAACGAAGGAGCAACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
ENST00000542713.1
CDS CAA 72 bp ATACATTGTTCTTCCCGCTGCATTTTCTCCAGAGCTTaGTCAATTCCAATTGGAATGTCGTGGTCTTCTCCT +
Preference number: 6 (lower is better)
Translates to: IHCSSRCIFSRA*SIPIGMSWSSP
Trigger: AGGAGAAGACCACGACATTCCAATTGGAATTGACAAAGCTCTGGAGAAAATGCAGCGGGAAGAACAATGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
ENST00000542713.1
CDS CAA 90 bp AGATATAAAATACATTGTTCTTCCCGCTGCATTTTCTCCAGAGCTTaGTCAATTCCAATTGGAATGTCGTGGTCTTCTCCTTCGCCCACA +
Preference number: 6 (lower is better)
Translates to: RYKIHCSSRCIFSRA*SIPIGMSWSSPSPT
Trigger: TGTGGGCGAAGGAGAAGACCACGACATTCCAATTGGAATTGACAAAGCTCTGGAGAAAATGCAGCGGGAAGAACAATGTATTTTATATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357266.9
ENST00000536438.5
ENST00000539068.5
ENST00000542713.1