RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FKBP11 (Homo sapiens)

Ensembl gene IDs: ENSG00000134285

Ensembl transcript IDs: ENST00000256680.10, ENST00000444214.6, ENST00000453172.2, ENST00000546671.5, ENST00000546847.5, ENST00000547789.1, ENST00000549084.1, ENST00000550765.6, ENST00000551694.5, ENST00000551807.1, ENST00000552878.5, ENST00000553027.1

Found 205 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCCCAGGAGGGCTGGCACCATGGCCATCCCTACCAGAGGCAAAATaGCCTTCACCAGCTTTAGCCAGTAGTTGGCTCGGATTAGTGCAA +
Preference number: 1 (lower is better)
Translates to: GPGGLAPWPSLPEAK*PSPALASSWLGLVQ
Trigger: TTGCACTAATCCGAGCCAACTACTGGCTAAAGCTGGTGAAGGGCATTTTGCCTCTGGTAGGGATGGCCATGGTGCCAGCCCTCCTGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000546847.5
3UTR TCA 90 bp TGGAGACTTTGGGTCTATTGGCCTTTCTGTATAGGTGATACCCAATaGGGCCCAGGAGGGCTGGCACCATGGCCATCCCTACCAGAGGCA +
Preference number: 1 (lower is better)
Translates to: WRLWVYWPFCIGDTQ*GPGGLAPWPSLPEA
Trigger: TGCCTCTGGTAGGGATGGCCATGGTGCCAGCCCTCCTGGGCCTCATTGGGTATCACCTATACAGAAAGGCCAATAGACCCAAAGTCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000546847.5
3UTR CCA 90 bp TGTAGAAAAGGGCAGGAAAGAAGTCCAGTGTTCTGGGAAAGGTGGTaGCACAGGCAGCAGACCCATGTGGCCCAAGCAGGTCTCTTCCCT +
Preference number: 1 (lower is better)
Translates to: CRKGQERSPVFWERW*HRQQTHVAQAGLFP
Trigger: AGGGAAGAGACCTGCTTGGGCCACATGGGTCTGCTGCCTGTGCCACCACCTTTCCCAGAACACTGGACTTCTTTCCTGCCCTTTTCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453172.2
3UTR CCA 90 bp AGTTGTAGAAAAGGGCAGGAAAGAAGTCCAGTGTTCTGGGAAAGGTaGTGGCACAGGCAGCAGACCCATGTGGCCCAAGCAGGTCTCTTC +
Preference number: 1 (lower is better)
Translates to: SCRKGQERSPVFWER*WHRQQTHVAQAGLF
Trigger: GAAGAGACCTGCTTGGGCCACATGGGTCTGCTGCCTGTGCCACCACCTTTCCCAGAACACTGGACTTCTTTCCTGCCCTTTTCTACAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453172.2
3UTR TCA 90 bp AGCTTCTTTTTGGAGACTTTGGGTCTATTGGCCTTTCTGTATAGGTaGTACCCAATGAGGCCCAGGAGGGCTGGCACCATGGCCATCCCT +
Preference number: 1 (lower is better)
Translates to: SFFLETLGLLAFLYR*YPMRPRRAGTMAIP
Trigger: AGGGATGGCCATGGTGCCAGCCCTCCTGGGCCTCATTGGGTATCACCTATACAGAAAGGCCAATAGACCCAAAGTCTCCAAAAAGAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000546847.5
3UTR CCA 90 bp TCCCTACCAGAGGCAAAATGCCCTTCACCAGCTTTAGCCAGTAGTTaGCTCGGATTAGTGCAATCAGCTCCACGTCATACTGCACCACTG +
Preference number: 1 (lower is better)
Translates to: SLPEAKCPSPALASS*LGLVQSAPRHTAPL
Trigger: CAGTGGTGCAGTATGACGTGGAGCTGATTGCACTAATCCGAGCCAACTACTGGCTAAAGCTGGTGAAGGGCATTTTGCCTCTGGTAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000546847.5
3UTR-3UTR GCA 90 bp CCCAATGAGGCCCAGGAGGGCTGGCACCATGGCCATCCCTACCAGAGGCAAAATGTCATACTGCACCACTaGATCCGCTGGGACAGATGG +
Preference number: 2 (lower is better)
Translates to: PNEAQEGWHHGHPYQRQNVILHH*IRWDRW
Trigger: CCATCTGTCCCAGCGGATGCAGTGGTGCAGTATGAC...ATTTTGCCTCTGGTAGGGATGGCCATGGTGCCAGCCCTCCTGGGCCTCATTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000546847.5
3UTR-3UTR GCA 90 bp CCAATGAGGCCCAGGAGGGCTGGCACCATGGCCATCCCTACCAGAGGCAAAATGATGTCGAGAAGACTCTaGTCCAGACCTGGAATCACC +
Preference number: 2 (lower is better)
Translates to: PMRPRRAGTMAIPTRGKMMSRRL*SRPGIT
Trigger: GGTGATTCCAGGTCTGGAGCAGAGTCTTCTCGACAT...CATTTTGCCTCTGGTAGGGATGGCCATGGTGCCAGCCCTCCTGGGCCTCATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256680.10
3UTR-3UTR CCA 90 bp TACCCAATGAGGCCCAGGAGGGCTGGCACCATGGCCATCCCTACCAGAGGCAAACGCTGGGACAGATGGTaGAAATCCCCGTTTTCCATA +
Preference number: 2 (lower is better)
Translates to: YPMRPRRAGTMAIPTRGKRWDRW*KSPFSI
Trigger: TATGGAAAACGGGGATTTCCACCATCTGTCCCAGCG...TTTGCCTCTGGTAGGGATGGCCATGGTGCCAGCCCTCCTGGGCCTCATTGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000546847.5
3UTR-3UTR TCA 90 bp GTGCAATCAGCTCCACGTCATACTGCACCACTGCATCCGCTGGGACAGATGGTGCCAAGTGAGAAGGAATaGTTGCCCTTCGCTTCTCTC +
Preference number: 2 (lower is better)
Translates to: VQSAPRHTAPLHPLGQMVPSEKE*LPFASL
Trigger: GAGAGAAGCGAAGGGCAATCATTCCTTCTCACTTGG...CACCATCTGTCCCAGCGGATGCAGTGGTGCAGTATGACGTGGAGCTGATTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000546847.5
3UTR-3UTR CCA 90 bp ACTGGGAATGGGGAGGTAATAGGGCTTTGGGTAAAAGTTTCTCCTTGGTCCCCCAGTTTGAGACCAGCCTaGCCAACATGGAGAAGCCCC +
Preference number: 2 (lower is better)
Translates to: TGNGEVIGLWVKVSPWSPSLRPA*PTWRSP
Trigger: GGGGCTTCTCCATGTTGGCCAGGCTGGTCTCAAACT...GGGGGACCAAGGAGAAACTTTTACCCAAAGCCCTATTACCTCCCCATTCCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552878.5
3UTR-3UTR GCA 90 bp CGGATTAGTGCAATCAGCTCCACGTCATACTGCACCACTGCATCCGCTGGGACAGTGAGAAGGAATGATTaGCCTTCGCTTCTCTCTGAG +
Preference number: 2 (lower is better)
Translates to: RISAISSTSYCTTASAGTVRRND*PSLLSE
Trigger: CTCAGAGAGAAGCGAAGGGCAATCATTCCTTCTCAC...TGTCCCAGCGGATGCAGTGGTGCAGTATGACGTGGAGCTGATTGCACTAATCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546847.5
3UTR-3UTR TCA 90 bp ACAAATAAGCAGCACTGGGAATGGGGAGGTAATAGGGCTTTGGGTAAAAGTTTCCTGAGGTTGGGAGTTTaGGACCAGCCTGGCCAACAT +
Preference number: 2 (lower is better)
Translates to: TNKQHWEWGGNRALGKSFLRLGV*DQPGQH
Trigger: ATGTTGGCCAGGCTGGTCTCAAACTCCCAACCTCAG...GAAACTTTTACCCAAAGCCCTATTACCTCCCCATTCCCAGTGCTGCTTATTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552878.5
3UTR-3UTR GCA 90 bp TTCTCTTCCTTGAGCTTCTTTTTGGAGACTTTGGGTCTATTGGCCTTTCTGTATAGCTCCACGTCATACTaGACCACTGCATCCGCTGGG +
Preference number: 2 (lower is better)
Translates to: FSSLSFFLETLGLLAFLYSSTSY*TTASAG
Trigger: CCCAGCGGATGCAGTGGTGCAGTATGACGTGGAGCT...ATACAGAAAGGCCAATAGACCCAAAGTCTCCAAAAAGAAGCTCAAGGAAGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000546847.5
3UTR-3UTR CCA 90 bp CCGTTTTCCATAGGCCAAGTGAGAAGGAATGATTGCCCTTCGCTTCTCTCCCACGGAATCACCTGCTTTTaGCCAAGTTCTATAACCAGA +
Preference number: 2 (lower is better)
Translates to: PFSIGQVRRNDCPSLLSHGITCF*PSSITR
Trigger: TCTGGTTATAGAACTTGGCCAAAAGCAGGTGATTCC...GTGGGAGAGAAGCGAAGGGCAATCATTCCTTCTCACTTGGCCTATGGAAAACGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000547789.1
3UTR-3UTR CCA 90 bp TGGTGGAAATCCCCGTTTTCCATAGGCCAAGTGAGAAGGAATGATTGCCCTTCGGGAATCACCTGCTTTTaGCCAAGTTCTATAACCAGA +
Preference number: 2 (lower is better)
Translates to: WWKSPFSIGQVRRNDCPSGITCF*PSSITR
Trigger: TCTGGTTATAGAACTTGGCCAAAAGCAGGTGATTCC...CGAAGGGCAATCATTCCTTCTCACTTGGCCTATGGAAAACGGGGATTTCCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000547789.1
3UTR-3UTR CCA 90 bp AGCCCAATACTCTGTGGAGTACAACACATTTTAGCTAATAGAACATTTGTTAGAGGCAGCAGACCCATGTaGCCCAAGCAGGTCTCTTCC +
Preference number: 2 (lower is better)
Translates to: SPILCGVQHILANRTFVRGSRPM*PKQVSS
Trigger: GGAAGAGACCTGCTTGGGCCACATGGGTCTGCTGCC...TCTAACAAATGTTCTATTAGCTAAAATGTGTTGTACTCCACAGAGTATTGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453172.2
3UTR-3UTR CCA 90 bp TTCTCTTCCTTGAGCTTCTTTTTGGAGACTTTGGGTCTATTGGCCTTTCTGTATGCTTTAGCCAGTAGTTaGCTCGGATTAGTGCAATCA +
Preference number: 2 (lower is better)
Translates to: FSSLSFFLETLGLLAFLYALASS*LGLVQS
Trigger: TGATTGCACTAATCCGAGCCAACTACTGGCTAAAGC...ATACAGAAAGGCCAATAGACCCAAAGTCTCCAAAAAGAAGCTCAAGGAAGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000546847.5
3UTR GCA 72 bp GGGCTGGCACCATGGCCATCCCTACCAGAGGCAAAATaGCCTTCACCAGCTTTAGCCAGTAGTTGGCTCGGA +
Preference number: 3 (lower is better)
Translates to: GLAPWPSLPEAK*PSPALASSWLG
Trigger: TCCGAGCCAACTACTGGCTAAAGCTGGTGAAGGGCATTTTGCCTCTGGTAGGGATGGCCATGGTGCCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000546847.5
3UTR TCA 72 bp TGGGTCTATTGGCCTTTCTGTATAGGTGATACCCAATaGGGCCCAGGAGGGCTGGCACCATGGCCATCCCTA +
Preference number: 3 (lower is better)
Translates to: WVYWPFCIGDTQ*GPGGLAPWPSL
Trigger: TAGGGATGGCCATGGTGCCAGCCCTCCTGGGCCTCATTGGGTATCACCTATACAGAAAGGCCAATAGACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000546847.5
3UTR-3UTR CAA 90 bp TACCCAATGAGGCCCAGGAGGGCTGGCACCATGGCCATCCCTACCAGAGGCAAATGGAATCACCTGCTTTaGGCCAAGTTCTATAACCAG +
Preference number: 3 (lower is better)
Translates to: YPMRPRRAGTMAIPTRGKWNHLL*AKFYNQ
Trigger: CTGGTTATAGAACTTGGCCAAAAGCAGGTGATTCCA...TTTGCCTCTGGTAGGGATGGCCATGGTGCCAGCCCTCCTGGGCCTCATTGGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256680.10
3UTR TCA 72 bp TTGGAGACTTTGGGTCTATTGGCCTTTCTGTATAGGTaGTACCCAATGAGGCCCAGGAGGGCTGGCACCATG +
Preference number: 3 (lower is better)
Translates to: LETLGLLAFLYR*YPMRPRRAGTM
Trigger: CATGGTGCCAGCCCTCCTGGGCCTCATTGGGTATCACCTATACAGAAAGGCCAATAGACCCAAAGTCTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000546847.5
3UTR-3UTR CAA 90 bp GTACAAATAAGCAGCACTGGGAATGGGGAGGTAATAGGGCTTTGGGTAAAAGTTCCTGAGGTTGGGAGTTaGAGACCAGCCTGGCCAACA +
Preference number: 3 (lower is better)
Translates to: VQISSTGNGEVIGLWVKVPEVGS*RPAWPT
Trigger: TGTTGGCCAGGCTGGTCTCAAACTCCCAACCTCAGG...AACTTTTACCCAAAGCCCTATTACCTCCCCATTCCCAGTGCTGCTTATTTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552878.5
3UTR CCA 72 bp GAGGCAAAATGCCCTTCACCAGCTTTAGCCAGTAGTTaGCTCGGATTAGTGCAATCAGCTCCACGTCATACT +
Preference number: 3 (lower is better)
Translates to: EAKCPSPALASS*LGLVQSAPRHT
Trigger: AGTATGACGTGGAGCTGATTGCACTAATCCGAGCCAACTACTGGCTAAAGCTGGTGAAGGGCATTTTGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000546847.5
3UTR CCA 72 bp GTGGGCAGAAGAGGTACAAATAAGCAGCACTGGGAATaGGGAGGTAATAGGGCTTTGGGTAAAAGTTTCTCC +
Preference number: 3 (lower is better)
Translates to: VGRRGTNKQHWE*GGNRALGKSFS
Trigger: GGAGAAACTTTTACCCAAAGCCCTATTACCTCCCCATTCCCAGTGCTGCTTATTTGTACCTCTTCTGCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552878.5
3UTR-3UTR CAA 90 bp AAATCCCCGTTTTCCATAGGCCAAGTGAGAAGGAATGATTGCCCTTCGCTTCTCTGGAATCACCTGCTTTaGGCCAAGTTCTATAACCAG +
Preference number: 3 (lower is better)
Translates to: KSPFSIGQVRRNDCPSLLWNHLL*AKFYNQ
Trigger: CTGGTTATAGAACTTGGCCAAAAGCAGGTGATTCCA...GAGAAGCGAAGGGCAATCATTCCTTCTCACTTGGCCTATGGAAAACGGGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000547789.1
CDS-3UTR TCA 90 bp CGCTTCTCTCCCACACACATGTCGAGAAGACTCTGCTCCAGACCTGGAATCACCAGGGGCGCAGGGTCATaGCTGGGCGCGGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: RFSPTHMSRRLCSRPGITRGAGS*LGAGQG
Trigger: TCCCTGCCCCGCGCCCAGTCATGACCCTGCGCCCCT...GGTGATTCCAGGTCTGGAGCAGAGTCTTCTCGACATGTGTGTGGGAGAGAAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000547789.1
CDS-3UTR TCA 90 bp ACTGGGAATGGGGAGGTAATAGGGCTTTGGGTAAAAGTTTCTCCTTGGTCCCCCAGGGGCGCAGGGTCATaGCTGGGCGCGGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: TGNGEVIGLWVKVSPWSPRGAGS*LGAGQG
Trigger: TCCCTGCCCCGCGCCCAGTCATGACCCTGCGCCCCT...GGGGGACCAAGGAGAAACTTTTACCCAAAGCCCTATTACCTCCCCATTCCCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000552878.5
CDS-3UTR TCA 90 bp AGGCCCAGGAGGGCTGGCACCATGGCCATCCCTACCAGAGGCAAAATGCCCTTCATAGGTGATACCCAATaGGGCCCAGGAGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: RPRRAGTMAIPTRGKMPFIGDTQ*GPGGLA
Trigger: TGCCAGCCCTCCTGGGCCTCATTGGGTATCACCTAT...GAAGGGCATTTTGCCTCTGGTAGGGATGGCCATGGTGCCAGCCCTCCTGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000546847.5
CDS-3UTR CCA 90 bp AGGGCAGGAAAGAAGTCCAGTGTTCTGGGAAAGGTGGTGGCACAGGCAGCAGACGACAGGCTGTTCGGGTaGCGGCAGCCAGGACAGCGT +
Preference number: 4 (lower is better)
Translates to: RAGKKSSVLGKVVAQAADDRLFG*RQPGQR
Trigger: ACGCTGTCCTGGCTGCCGCCACCCGAACAGCCTGTC...GTCTGCTGCCTGTGCCACCACCTTTCCCAGAACACTGGACTTCTTTCCTGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453172.2
CDS-3UTR TCA 90 bp GCTTTAGCCAGTAGTTGGCTCGGATTAGTGCAATCAGCTCCACGTCATACTGCAAGGGGCGCAGGGTCATaGCTGGGCGCGGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: ALASSWLGLVQSAPRHTARGAGS*LGAGQG
Trigger: TCCCTGCCCCGCGCCCAGTCATGACCCTGCGCCCCT...TGCAGTATGACGTGGAGCTGATTGCACTAATCCGAGCCAACTACTGGCTAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256680.10
CDS-3UTR CCA 90 bp AGTCCAGTGTTCTGGGAAAGGTGGTGGCACAGGCAGCAGACCCATGTGGCCCAAGGCAGCAGACCCATGTaGCCCAAGCAGGTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SPVFWERWWHRQQTHVAQGSRPM*PKQVSS
Trigger: GGAAGAGACCTGCTTGGGCCACATGGGTCTGCTGCC...TTGGGCCACATGGGTCTGCTGCCTGTGCCACCACCTTTCCCAGAACACTGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453172.2
CDS-3UTR GCA 90 bp AGGGCAGGAAAGAAGTCCAGTGTTCTGGGAAAGGTGGTGGCACAGGCAGCAGACGGCTGCTGGAGGTCATaGCAGGTGGCCTCATCAGGT +
Preference number: 4 (lower is better)
Translates to: RAGKKSSVLGKVVAQAADGCWRS*QVASSG
Trigger: ACCTGATGAGGCCACCTGGCATGACCTCCAGCAGCC...GTCTGCTGCCTGTGCCACCACCTTTCCCAGAACACTGGACTTCTTTCCTGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453172.2
CDS-3UTR TCA 90 bp CCCAATGAGGCCCAGGAGGGCTGGCACCATGGCCATCCCTACCAGAGGCAAAATCCCTTCGCTTCTCTCTaGGGGAAGGAATGTCAGTCA +
Preference number: 4 (lower is better)
Translates to: PNEAQEGWHHGHPYQRQNPFASL*GKECQS
Trigger: TGACTGACATTCCTTCCCTCAGAGAGAAGCGAAGGG...ATTTTGCCTCTGGTAGGGATGGCCATGGTGCCAGCCCTCCTGGGCCTCATTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546847.5
CDS-3UTR GCA 90 bp AGGCCCAGGAGGGCTGGCACCATGGCCATCCCTACCAGAGGCAAAATGCCCTTCTACAGGGGTCACGGATaGTCTTCCAAAGATCCCGTT +
Preference number: 4 (lower is better)
Translates to: RPRRAGTMAIPTRGKMPFYRGHG*SSKDPV
Trigger: AACGGGATCTTTGGAAGAGCATCCGTGACCCCTGTA...GAAGGGCATTTTGCCTCTGGTAGGGATGGCCATGGTGCCAGCCCTCCTGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256680.10
CDS-3UTR CCA 90 bp GCTTCTCTCCCACACACATGTCGAGAAGACTCTGCTCCAGACCTGGAATCACCTCCCAGGGTCTCCACTTaGAGGGTCCGGACGGGACTT +
Preference number: 4 (lower is better)
Translates to: ASLPHTCREDSAPDLESPPRVST*RVRTGL
Trigger: AAGTCCCGTCCGGACCCTCCAAGTGGAGACCCTGGG...AGGTGATTCCAGGTCTGGAGCAGAGTCTTCTCGACATGTGTGTGGGAGAGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256680.10
CDS-3UTR CCA 90 bp CCCTTCGCTTCTCTCCCACACACATGTCGAGAAGACTCTGCTCCAGACCTGGAACTCGGCACATGGTTCTaGGGGCTCCACCTACGATCG +
Preference number: 4 (lower is better)
Translates to: PFASLPHTCREDSAPDLELGTWF*GLHLRS
Trigger: CGATCGTAGGTGGAGCCCCCAGAACCATGTGCCGAG...TTCCAGGTCTGGAGCAGAGTCTTCTCGACATGTGTGTGGGAGAGAAGCGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000547789.1
CDS-3UTR CCA 90 bp CCTTCGCTTCTCTCCCACACACATGTCGAGAAGACTCTGCTCCAGACCTGGAATAGCGGGCTCGGCACATaGTTCTGGGGGCTCCACCTA +
Preference number: 4 (lower is better)
Translates to: PSLLSHTHVEKTLLQTWNSGLGT*FWGLHL
Trigger: TAGGTGGAGCCCCCAGAACCATGTGCCGAGCCCGCT...ATTCCAGGTCTGGAGCAGAGTCTTCTCGACATGTGTGTGGGAGAGAAGCGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000547789.1
CDS-3UTR CCA 90 bp GTTCTGGGAAAGGTGGTGGCACAGGCAGCAGACCCATGTGGCCCAAGCAGGTCTAGTCCCTGGGACAGATaGTGGAAATCCCCGTTTTCC +
Preference number: 4 (lower is better)
Translates to: VLGKVVAQAADPCGPSRSSPWDR*WKSPFS
Trigger: GGAAAACGGGGATTTCCACCATCTGTCCCAGGGACT...AGACCTGCTTGGGCCACATGGGTCTGCTGCCTGTGCCACCACCTTTCCCAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453172.2
CDS-3UTR CCA 90 bp GTCCAGTGTTCTGGGAAAGGTGGTGGCACAGGCAGCAGACCCATGTGGCCCAAGAGAAGTCCAGTGTTCTaGGAAAGGTGGTGGCACAGG +
Preference number: 4 (lower is better)
Translates to: VQCSGKGGGTGSRPMWPKRSPVF*ERWWHR
Trigger: CCTGTGCCACCACCTTTCCCAGAACACTGGACTTCT...CTTGGGCCACATGGGTCTGCTGCCTGTGCCACCACCTTTCCCAGAACACTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453172.2
CDS-3UTR TCA 90 bp TGGAATCACCTGCTTTTGGCCAAGTTCTATAACCAGAGGGTCTCTGGTCAGGGAATGGAGCGGGAGGAGTaGGGGGCGCAGGGTCATGAC +
Preference number: 4 (lower is better)
Translates to: WNHLLLAKFYNQRVSGQGMEREE*GAQGHD
Trigger: GTCATGACCCTGCGCCCCTCACTCCTCCCGCTCCAT...TCCCTGACCAGAGACCCTCTGGTTATAGAACTTGGCCAAAAGCAGGTGATTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000547789.1
CDS-3UTR TCA 90 bp GTCCAGTGTTCTGGGAAAGGTGGTGGCACAGGCAGCAGACCCATGTGGCCCAAGCCAAGTGAGAAGGAATaGTTGCCCTTCGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: VQCSGKGGGTGSRPMWPKPSEKE*LPFASL
Trigger: GAGAGAAGCGAAGGGCAATCATTCCTTCTCACTTGG...CTTGGGCCACATGGGTCTGCTGCCTGTGCCACCACCTTTCCCAGAACACTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453172.2
CDS-3UTR GCA 90 bp CCCAATGAGGCCCAGGAGGGCTGGCACCATGGCCATCCCTACCAGAGGCAAAATCTACCAGAGGCAAAATaGCCTTCACCAGCTTTAGCC +
Preference number: 4 (lower is better)
Translates to: PNEAQEGWHHGHPYQRQNLPEAK*PSPALA
Trigger: GGCTAAAGCTGGTGAAGGGCATTTTGCCTCTGGTAG...ATTTTGCCTCTGGTAGGGATGGCCATGGTGCCAGCCCTCCTGGGCCTCATTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000546847.5
CDS-3UTR CCA 90 bp TGGGCAGAAGAGGTACAAATAAGCAGCACTGGGAATGGGGAGGTAATAGGGCTTGACAGGCTGTTCGGGTaGCGGCAGCCAGGACAGCGT +
Preference number: 4 (lower is better)
Translates to: WAEEVQISSTGNGEVIGLDRLFG*RQPGQR
Trigger: ACGCTGTCCTGGCTGCCGCCACCCGAACAGCCTGTC...AAGCCCTATTACCTCCCCATTCCCAGTGCTGCTTATTTGTACCTCTTCTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552878.5
CDS-3UTR CCA 90 bp TGGGCAGAAGAGGTACAAATAAGCAGCACTGGGAATGGGGAGGTAATAGGGCTTAGCGGGCTCGGCACATaGTTCTGGGGGCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: WAEEVQISSTGNGEVIGLSGLGT*FWGLHQ
Trigger: CTGGTGGAGCCCCCAGAACCATGTGCCGAGCCCGCT...AAGCCCTATTACCTCCCCATTCCCAGTGCTGCTTATTTGTACCTCTTCTGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552878.5
CDS-3UTR CCA 90 bp AGGGCAGGAAAGAAGTCCAGTGTTCTGGGAAAGGTGGTGGCACAGGCAGCAGACTTCTGGGAAAGGTGGTaGCACAGGCAGCAGACCCAT +
Preference number: 4 (lower is better)
Translates to: RAGKKSSVLGKVVAQAADFWERW*HRQQTH
Trigger: ATGGGTCTGCTGCCTGTGCCACCACCTTTCCCAGAA...GTCTGCTGCCTGTGCCACCACCTTTCCCAGAACACTGGACTTCTTTCCTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453172.2
CDS-3UTR GCA 90 bp CGGATTAGTGCAATCAGCTCCACGTCATACTGCACCACTGCATCCGCTGGGACAGTCATACTGCACCACTaGATCCGCTGGGACAGATGG +
Preference number: 4 (lower is better)
Translates to: RISAISSTSYCTTASAGTVILHH*IRWDRW
Trigger: CCATCTGTCCCAGCGGATGCAGTGGTGCAGTATGAC...TGTCCCAGCGGATGCAGTGGTGCAGTATGACGTGGAGCTGATTGCACTAATCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000546847.5
CDS-3UTR CCA 90 bp TGGCTCGGATTAGTGCAATCAGCTCCACGTCATACTGCACCACTGCATCCGCTGCACCACTGCATCCGCTaGGACAGATGGTGGAAATCC +
Preference number: 4 (lower is better)
Translates to: WLGLVQSAPRHTAPLHPLHHCIR*DRWWKS
Trigger: GGATTTCCACCATCTGTCCCAGCGGATGCAGTGGTG...CAGCGGATGCAGTGGTGCAGTATGACGTGGAGCTGATTGCACTAATCCGAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000546847.5
CDS-3UTR CCA 90 bp ACTGGGAATGGGGAGGTAATAGGGCTTTGGGTAAAAGTTTCTCCTTGGTCCCCCACCAGGGTCTCCACTTaGAGGGTCCGGACGGGACTT +
Preference number: 4 (lower is better)
Translates to: TGNGEVIGLWVKVSPWSPTRVST*RVRTGL
Trigger: AAGTCCCGTCCGGACCCTCCAAGTGGAGACCCTGGT...GGGGGACCAAGGAGAAACTTTTACCCAAAGCCCTATTACCTCCCCATTCCCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552878.5
CDS-3UTR CCA 90 bp GTGGCTGTACAGCTGACACAGCGTAGAGTTGTAGAAAAGGGCAGGAAAGAAGTCCTCGGCACATGGTTCTaGGGGCTCCACCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: VAVQLTQRRVVEKGRKEVLGTWF*GLHQGL
Trigger: GAGACCCTGGTGGAGCCCCCAGAACCATGTGCCGAG...GACTTCTTTCCTGCCCTTTTCTACAACTCTACGCTGTGTCAGCTGTACAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453172.2
CDS-3UTR CCA 90 bp GTTCTGGGAAAGGTGGTGGCACAGGCAGCAGACCCATGTGGCCCAAGCAGGTCTGTTGTCTTTAGTCCCTaGGACAGATGGTGGAAATCC +
Preference number: 4 (lower is better)
Translates to: VLGKVVAQAADPCGPSRSVVFSP*DRWWKS
Trigger: GGATTTCCACCATCTGTCCCAGGGACTAAAGACAAC...AGACCTGCTTGGGCCACATGGGTCTGCTGCCTGTGCCACCACCTTTCCCAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453172.2
CDS-3UTR CCA 90 bp AGTCCAGTGTTCTGGGAAAGGTGGTGGCACAGGCAGCAGACCCATGTGGCCCAATCCCTAACAAGTTACTaGCTGCTGGAGGTCATGCCA +
Preference number: 4 (lower is better)
Translates to: SPVFWERWWHRQQTHVAQSLTSY*LLEVMP
Trigger: TGGCATGACCTCCAGCAGCCAGTAACTTGTTAGGGA...TTGGGCCACATGGGTCTGCTGCCTGTGCCACCACCTTTCCCAGAACACTGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453172.2
CDS-3UTR CCA 90 bp CTCTGCTCCAGACCTGGAATCACCTGCTTTTGGCCAAGTTCTATAACCAGAGGGGACAGGGTCTCCACTTaGAGGGTCCGGACGGGACTT +
Preference number: 4 (lower is better)
Translates to: LCSRPGITCFWPSSITRGDRVST*RVRTGL
Trigger: AAGTCCCGTCCGGACCCTCCAAGTGGAGACCCTGTC...CCCTCTGGTTATAGAACTTGGCCAAAAGCAGGTGATTCCAGGTCTGGAGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547789.1
CDS-3UTR GCA 90 bp GCTTCTCTCCCACACACATGTCGAGAAGACTCTGCTCCAGACCTGGAATCACCTGTCATACTGCACCACTaGATCCGCTGGGACAGATGG +
Preference number: 4 (lower is better)
Translates to: ASLPHTCREDSAPDLESPVILHH*IRWDRW
Trigger: CCATCTGTCCCAGCGGATGCAGTGGTGCAGTATGAC...AGGTGATTCCAGGTCTGGAGCAGAGTCTTCTCGACATGTGTGTGGGAGAGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256680.10
CDS-3UTR CCA 90 bp GTGGCTGTACAGCTGACACAGCGTAGAGTTGTAGAAAAGGGCAGGAAAGAAGTCACCAGGGTCTCCACTTaGAGGGTCCGGACGGGACTT +
Preference number: 4 (lower is better)
Translates to: VAVQLTQRRVVEKGRKEVTRVST*RVRTGL
Trigger: AAGTCCCGTCCGGACCCTCCAAGTGGAGACCCTGGT...GACTTCTTTCCTGCCCTTTTCTACAACTCTACGCTGTGTCAGCTGTACAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453172.2
CDS-3UTR TCA 90 bp CGCTTCTCTCCCACACACATGTCGAGAAGACTCTGCTCCAGACCTGGAATCACCCCAAGTGAGAAGGAATaGTTGCCCTTCGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: RFSPTHMSRRLCSRPGITPSEKE*LPFASL
Trigger: GAGAGAAGCGAAGGGCAATCATTCCTTCTCACTTGG...GGTGATTCCAGGTCTGGAGCAGAGTCTTCTCGACATGTGTGTGGGAGAGAAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000547789.1
CDS-3UTR TCA 90 bp CCAGCTTTAGCCAGTAGTTGGCTCGGATTAGTGCAATCAGCTCCACGTCATACTATAGGTGATACCCAATaGGGCCCAGGAGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PALASSWLGLVQSAPRHTIGDTQ*GPGGLA
Trigger: TGCCAGCCCTCCTGGGCCTCATTGGGTATCACCTAT...AGTATGACGTGGAGCTGATTGCACTAATCCGAGCCAACTACTGGCTAAAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000546847.5
CDS-3UTR GCA 90 bp TACCCAATGAGGCCCAGGAGGGCTGGCACCATGGCCATCCCTACCAGAGGCAAAAGACCTGGAATCACCTaGTTTTGGCCAAGTTCTATA +
Preference number: 4 (lower is better)
Translates to: YPMRPRRAGTMAIPTRGKRPGIT*FWPSSI
Trigger: TATAGAACTTGGCCAAAAGCAGGTGATTCCAGGTCT...TTTGCCTCTGGTAGGGATGGCCATGGTGCCAGCCCTCCTGGGCCTCATTGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000546847.5
CDS-3UTR GCA 90 bp CCCAATGAGGCCCAGGAGGGCTGGCACCATGGCCATCCCTACCAGAGGCAAAATAGACCTGGAATCACCTaGTTTTGGCCAAGTTCTATA +
Preference number: 4 (lower is better)
Translates to: PNEAQEGWHHGHPYQRQNRPGIT*FWPSSI
Trigger: TATAGAACTTGGCCAAAAGCAGGTGATTCCAGGTCT...ATTTTGCCTCTGGTAGGGATGGCCATGGTGCCAGCCCTCCTGGGCCTCATTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000546847.5
CDS-3UTR CCA 90 bp CCAATGAGGCCCAGGAGGGCTGGCACCATGGCCATCCCTACCAGAGGCAAAATGGGAATCACCTGCTTTTaGCCAAGTTCTATAACCAGA +
Preference number: 4 (lower is better)
Translates to: PMRPRRAGTMAIPTRGKMGITCF*PSSITR
Trigger: TCTGGTTATAGAACTTGGCCAAAAGCAGGTGATTCC...CATTTTGCCTCTGGTAGGGATGGCCATGGTGCCAGCCCTCCTGGGCCTCATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000546847.5
CDS-3UTR CCA 90 bp CTCCCACACACATGTCGAGAAGACTCTGCTCCAGACCTGGAATCACCTGCTTTTCACCACTGCATCCGCTaGGACAGATGGTGGAAATCC +
Preference number: 4 (lower is better)
Translates to: LPHTCREDSAPDLESPAFHHCIR*DRWWKS
Trigger: GGATTTCCACCATCTGTCCCAGCGGATGCAGTGGTG...AAAAGCAGGTGATTCCAGGTCTGGAGCAGAGTCTTCTCGACATGTGTGTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256680.10
CDS-3UTR CCA 90 bp GGTACAAATAAGCAGCACTGGGAATGGGGAGGTAATAGGGCTTTGGGTAAAAGTCTCGGCACATGGTTCTaGGGGCTCCACCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: GTNKQHWEWGGNRALGKSLGTWF*GLHQGL
Trigger: GAGACCCTGGTGGAGCCCCCAGAACCATGTGCCGAG...ACTTTTACCCAAAGCCCTATTACCTCCCCATTCCCAGTGCTGCTTATTTGTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000552878.5
CDS-3UTR TCA 90 bp AGAATTACGAGCCCAATACTCTGTGGAGTACAACACATTTTAGCTAATAGAACAAGGGGCGCAGGGTCATaGCTGGGCGCGGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: RITSPILCGVQHILANRTRGAGS*LGAGQG
Trigger: TCCCTGCCCCGCGCCCAGTCATGACCCTGCGCCCCT...TGTTCTATTAGCTAAAATGTGTTGTACTCCACAGAGTATTGGGCTCGTAATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000453172.2
CDS-3UTR TCA 90 bp TTCGCTTCTCTCCCACACACATGTCGAGAAGACTCTGCTCCAGACCTGGAATCAGCCTTTCTGTATAGGTaGTACCCAATGAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: FASLPHTCREDSAPDLESAFLYR*YPMRPR
Trigger: CCTGGGCCTCATTGGGTATCACCTATACAGAAAGGC...TGATTCCAGGTCTGGAGCAGAGTCTTCTCGACATGTGTGTGGGAGAGAAGCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256680.10
CDS-3UTR TCA 90 bp CCAGCTTTAGCCAGTAGTTGGCTCGGATTAGTGCAATCAGCTCCACGTCATACTCAGCCTCAGTCCAGCTaGAGCTCCTTCAGCAAAACC +
Preference number: 4 (lower is better)
Translates to: PALASSWLGLVQSAPRHTQPQSS*SSFSKT
Trigger: GGTTTTGCTGAAGGAGCTTCAGCTGGACTGAGGCTG...AGTATGACGTGGAGCTGATTGCACTAATCCGAGCCAACTACTGGCTAAAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546847.5
CDS-3UTR GCA 90 bp TTGGCTCGGATTAGTGCAATCAGCTCCACGTCATACTGCACCACTGCATCCGCTATGTCGAGAAGACTCTaGTCCAGACCTGGAATCACC +
Preference number: 4 (lower is better)
Translates to: LARISAISSTSYCTTASAMSRRL*SRPGIT
Trigger: GGTGATTCCAGGTCTGGAGCAGAGTCTTCTCGACAT...AGCGGATGCAGTGGTGCAGTATGACGTGGAGCTGATTGCACTAATCCGAGCCAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000546847.5
CDS-3UTR GCA 90 bp AAATCCCCGTTTTCCATAGGCCAAGTGAGAAGGAATGATTGCCCTTCGCTTCTCAGCTCCACGTCATACTaGACCACTGCATCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: KSPFSIGQVRRNDCPSLLSSTSY*TTASAG
Trigger: CCCAGCGGATGCAGTGGTGCAGTATGACGTGGAGCT...GAGAAGCGAAGGGCAATCATTCCTTCTCACTTGGCCTATGGAAAACGGGGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000546847.5
CDS-3UTR CCA 90 bp CTTTTGGCCAAGTTCTATAACCAGAGGGTCTCTGGTCAGGGAGGTGTCAATAATCTCGGCACATGGTTCTaGGGGCTCCACCTACGATCG +
Preference number: 4 (lower is better)
Translates to: LLAKFYNQRVSGQGGVNNLGTWF*GLHLRS
Trigger: CGATCGTAGGTGGAGCCCCCAGAACCATGTGCCGAG...ATTATTGACACCTCCCTGACCAGAGACCCTCTGGTTATAGAACTTGGCCAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547789.1
CDS-3UTR CCA 90 bp CTCTCCCACACACATGTCGAGAAGACTCTGCTCCAGACCTGGAATCACCTGCTTCGCTGGGACAGATGGTaGAAATCCCCGTTTTCCATA +
Preference number: 4 (lower is better)
Translates to: LSHTHVEKTLLQTWNHLLRWDRW*KSPFSI
Trigger: TATGGAAAACGGGGATTTCCACCATCTGTCCCAGCG...AAGCAGGTGATTCCAGGTCTGGAGCAGAGTCTTCTCGACATGTGTGTGGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256680.10
CDS-3UTR CCA 90 bp TCCCCGTTTTCCATAGGCCAAGTGAGAAGGAATGATTGCCCTTCGCTTCTCTCCATCCGCTGGGACAGATaGTGGAAATCCCCGTTTTCC +
Preference number: 4 (lower is better)
Translates to: SPFSIGQVRRNDCPSLLSIRWDR*WKSPFS
Trigger: GGAAAACGGGGATTTCCACCATCTGTCCCAGCGGAT...GGAGAGAAGCGAAGGGCAATCATTCCTTCTCACTTGGCCTATGGAAAACGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000256680.10
CDS-3UTR CCA 90 bp TGGGCAGAAGAGGTACAAATAAGCAGCACTGGGAATGGGGAGGTAATAGGGCTTAGTTTGAGACCAGCCTaGCCAACATGGAGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: WAEEVQISSTGNGEVIGLSLRPA*PTWRSP
Trigger: GGGGCTTCTCCATGTTGGCCAGGCTGGTCTCAAACT...AAGCCCTATTACCTCCCCATTCCCAGTGCTGCTTATTTGTACCTCTTCTGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552878.5
CDS-3UTR TCA 90 bp CTCCCACACACATGTCGAGAAGACTCTGCTCCAGACCTGGAATCACCTGCTTTTCCAAGTGAGAAGGAATaGTTGCCCTTCGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: LPHTCREDSAPDLESPAFPSEKE*LPFASL
Trigger: GAGAGAAGCGAAGGGCAATCATTCCTTCTCACTTGG...AAAAGCAGGTGATTCCAGGTCTGGAGCAGAGTCTTCTCGACATGTGTGTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000547789.1
CDS-3UTR TCA 90 bp TGGTGGAAATCCCCGTTTTCCATAGGCCAAGTGAGAAGGAATGATTGCCCTTCGGCCTTTCTGTATAGGTaGTACCCAATGAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: WWKSPFSIGQVRRNDCPSAFLYR*YPMRPR
Trigger: CCTGGGCCTCATTGGGTATCACCTATACAGAAAGGC...CGAAGGGCAATCATTCCTTCTCACTTGGCCTATGGAAAACGGGGATTTCCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000546847.5
CDS-3UTR GCA 90 bp TTCGCTTCTCTCCCACACACATGTCGAGAAGACTCTGCTCCAGACCTGGAATCAGTGAGAAGGAATGATTaGCCTTCGCTTCTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: FASLPHTCREDSAPDLESVRRND*PSLLSH
Trigger: GTGGGAGAGAAGCGAAGGGCAATCATTCCTTCTCAC...TGATTCCAGGTCTGGAGCAGAGTCTTCTCGACATGTGTGTGGGAGAGAAGCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000547789.1
CDS-3UTR CCA 90 bp GCTTCTTTTTGGAGACTTTGGGTCTATTGGCCTTTCTGTATAGGTGATACCCAAAGCGGGCTCGGCACATaGTTCTGGGGGCTCCACCTA +
Preference number: 4 (lower is better)
Translates to: ASFWRLWVYWPFCIGDTQSGLGT*FWGLHL
Trigger: TAGGTGGAGCCCCCAGAACCATGTGCCGAGCCCGCT...TTGGGTATCACCTATACAGAAAGGCCAATAGACCCAAAGTCTCCAAAAAGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256680.10
CDS-3UTR CCA 90 bp AGGGCAGGAAAGAAGTCCAGTGTTCTGGGAAAGGTGGTGGCACAGGCAGCAGACGGAATCACCTGCTTTTaGCCAAGTTCTATAACCAGA +
Preference number: 4 (lower is better)
Translates to: RAGKKSSVLGKVVAQAADGITCF*PSSITR
Trigger: TCTGGTTATAGAACTTGGCCAAAAGCAGGTGATTCC...GTCTGCTGCCTGTGCCACCACCTTTCCCAGAACACTGGACTTCTTTCCTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453172.2
CDS-3UTR CCA 90 bp ACTGGGAATGGGGAGGTAATAGGGCTTTGGGTAAAAGTTTCTCCTTGGTCCCCCTCCATCTGGGACAGATaGTGGAAATCCCCGTTTTCC +
Preference number: 4 (lower is better)
Translates to: TGNGEVIGLWVKVSPWSPSIWDR*WKSPFS
Trigger: GGAAAACGGGGATTTCCACCATCTGTCCCAGATGGA...GGGGGACCAAGGAGAAACTTTTACCCAAAGCCCTATTACCTCCCCATTCCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000552878.5
CDS-3UTR TCA 90 bp TGGTGGAAATCCCCGTTTTCCATAGGCCAAGTGAGAAGGAATGATTGCCCTTCGCCAAGTGAGAAGGAATaGTTGCCCTTCGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: WWKSPFSIGQVRRNDCPSPSEKE*LPFASL
Trigger: GAGAGAAGCGAAGGGCAATCATTCCTTCTCACTTGG...CGAAGGGCAATCATTCCTTCTCACTTGGCCTATGGAAAACGGGGATTTCCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256680.10
ENST00000546847.5
ENST00000547789.1
CDS-3UTR TCA 90 bp GTACAAATAAGCAGCACTGGGAATGGGGAGGTAATAGGGCTTTGGGTAAAAGTTGACAGGAGAATTGCTTaGACCCGGGTGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: VQISSTGNGEVIGLWVKVDRRIA*TRVAEV
Trigger: AACCTCCGCCACCCGGGTTCAAGCAATTCTCCTGTC...AACTTTTACCCAAAGCCCTATTACCTCCCCATTCCCAGTGCTGCTTATTTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552878.5
CDS-3UTR GCA 90 bp GTGGCTGTACAGCTGACACAGCGTAGAGTTGTAGAAAAGGGCAGGAAAGAAGTCATGTCGAGAAGACTCTaGTCCAGACCTGGAATCACC +
Preference number: 4 (lower is better)
Translates to: VAVQLTQRRVVEKGRKEVMSRRL*SRPGIT
Trigger: GGTGATTCCAGGTCTGGAGCAGAGTCTTCTCGACAT...GACTTCTTTCCTGCCCTTTTCTACAACTCTACGCTGTGTCAGCTGTACAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453172.2
CDS-3UTR GCA 90 bp GCTTTAGCCAGTAGTTGGCTCGGATTAGTGCAATCAGCTCCACGTCATACTGCAATGTCGAGAAGACTCTaGTCCAGACCTGGAATCACC +
Preference number: 4 (lower is better)
Translates to: ALASSWLGLVQSAPRHTAMSRRL*SRPGIT
Trigger: GGTGATTCCAGGTCTGGAGCAGAGTCTTCTCGACAT...TGCAGTATGACGTGGAGCTGATTGCACTAATCCGAGCCAACTACTGGCTAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000546847.5
CDS-3UTR GCA 90 bp TGGAATCACCTGCTTTTGGCCAAGTTCTATAACCAGAGGGTCTCTGGTCAGGGAATGTCGAGAAGACTCTaGTCCAGACCTGGAATCACC +
Preference number: 4 (lower is better)
Translates to: WNHLLLAKFYNQRVSGQGMSRRL*SRPGIT
Trigger: GGTGATTCCAGGTCTGGAGCAGAGTCTTCTCGACAT...TCCCTGACCAGAGACCCTCTGGTTATAGAACTTGGCCAAAAGCAGGTGATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000547789.1
CDS-3UTR GCA 90 bp TGGGCAGAAGAGGTACAAATAAGCAGCACTGGGAATGGGGAGGTAATAGGGCTTATGTCGAGAAGACTCTaGTCCAGACCTGGAATCACC +
Preference number: 4 (lower is better)
Translates to: WAEEVQISSTGNGEVIGLMSRRL*SRPGIT
Trigger: GGTGATTCCAGGTCTGGAGCAGAGTCTTCTCGACAT...AAGCCCTATTACCTCCCCATTCCCAGTGCTGCTTATTTGTACCTCTTCTGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552878.5
CDS-3UTR GCA 90 bp CCAGCTTTAGCCAGTAGTTGGCTCGGATTAGTGCAATCAGCTCCACGTCATACTGTGAGAAGGAATGATTaGCCTTCGCTTCTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: PALASSWLGLVQSAPRHTVRRND*PSLLSH
Trigger: GTGGGAGAGAAGCGAAGGGCAATCATTCCTTCTCAC...AGTATGACGTGGAGCTGATTGCACTAATCCGAGCCAACTACTGGCTAAAGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256680.10
CDS-3UTR CCA 90 bp TCCCACACACATGTCGAGAAGACTCTGCTCCAGACCTGGAATCACCTGCTTTTGATTACCTGGGACAGATaGTGGAAATCCCCGTTTTCC +
Preference number: 4 (lower is better)
Translates to: SHTHVEKTLLQTWNHLLLITWDR*WKSPFS
Trigger: GGAAAACGGGGATTTCCACCATCTGTCCCAGGTAAT...CAAAAGCAGGTGATTCCAGGTCTGGAGCAGAGTCTTCTCGACATGTGTGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547789.1
CDS-3UTR TCA 90 bp GTACAAATAAGCAGCACTGGGAATGGGGAGGTAATAGGGCTTTGGGTAAAAGTTCTGAGGTTGGGAGTTTaGGACCAGCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: VQISSTGNGEVIGLWVKVLRLGV*DQPGQH
Trigger: ATGTTGGCCAGGCTGGTCTCAAACTCCCAACCTCAG...AACTTTTACCCAAAGCCCTATTACCTCCCCATTCCCAGTGCTGCTTATTTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552878.5
CDS-3UTR GCA 90 bp TGGGCAGAAGAGGTACAAATAAGCAGCACTGGGAATGGGGAGGTAATAGGGCTTGTGGTGAGTGAAGATTaGACTATTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: WAEEVQISSTGNGEVIGLVVSED*TIALQP
Trigger: AGGCTGGAGTGCAATAGTGCAATCTTCACTCACCAC...AAGCCCTATTACCTCCCCATTCCCAGTGCTGCTTATTTGTACCTCTTCTGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552878.5
CDS-3UTR CCA 90 bp TTCGCTTCTCTCCCACACACATGTCGAGAAGACTCTGCTCCAGACCTGGAATCAGCTTTAGCCAGTAGTTaGCTCGGATTAGTGCAATCA +
Preference number: 4 (lower is better)
Translates to: FASLPHTCREDSAPDLESALASS*LGLVQS
Trigger: TGATTGCACTAATCCGAGCCAACTACTGGCTAAAGC...TGATTCCAGGTCTGGAGCAGAGTCTTCTCGACATGTGTGTGGGAGAGAAGCGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256680.10
CDS-3UTR CCA 90 bp AGAATTACGAGCCCAATACTCTGTGGAGTACAACACATTTTAGCTAATAGAACAAGCGGGCTCGGCACATaGTTCTGGGGGCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: RITSPILCGVQHILANRTSGLGT*FWGLHQ
Trigger: CTGGTGGAGCCCCCAGAACCATGTGCCGAGCCCGCT...TGTTCTATTAGCTAAAATGTGTTGTACTCCACAGAGTATTGGGCTCGTAATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453172.2
CDS-3UTR TCA 90 bp GGTACAAATAAGCAGCACTGGGAATGGGGAGGTAATAGGGCTTTGGGTAAAAGTCCAAGTGAGAAGGAATaGTTGCCCTTCGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: GTNKQHWEWGGNRALGKSPSEKE*LPFASL
Trigger: GAGAGAAGCGAAGGGCAATCATTCCTTCTCACTTGG...ACTTTTACCCAAAGCCCTATTACCTCCCCATTCCCAGTGCTGCTTATTTGTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552878.5
CDS-3UTR GCA 90 bp AAATCCCCGTTTTCCATAGGCCAAGTGAGAAGGAATGATTGCCCTTCGCTTCTCGTGAGAAGGAATGATTaGCCTTCGCTTCTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: KSPFSIGQVRRNDCPSLLVRRND*PSLLSE
Trigger: CTCAGAGAGAAGCGAAGGGCAATCATTCCTTCTCAC...GAGAAGCGAAGGGCAATCATTCCTTCTCACTTGGCCTATGGAAAACGGGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546847.5
CDS-3UTR CCA 90 bp TGGTGGAAATCCCCGTTTTCCATAGGCCAAGTGAGAAGGAATGATTGCCCTTCGGCTTTAGCCAGTAGTTaGCTCGGATTAGTGCAATCA +
Preference number: 4 (lower is better)
Translates to: WWKSPFSIGQVRRNDCPSALASS*LGLVQS
Trigger: TGATTGCACTAATCCGAGCCAACTACTGGCTAAAGC...CGAAGGGCAATCATTCCTTCTCACTTGGCCTATGGAAAACGGGGATTTCCACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000546847.5
CDS-3UTR CCA 90 bp TCGCTTCTCTCCCACACACATGTCGAGAAGACTCTGCTCCAGACCTGGAATCACTCTTTTTGGAGACTTTaGGTCTATTGGCCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: SLLSHTHVEKTLLQTWNHSFWRL*VYWPFC
Trigger: ACAGAAAGGCCAATAGACCCAAAGTCTCCAAAAAGA...GTGATTCCAGGTCTGGAGCAGAGTCTTCTCGACATGTGTGTGGGAGAGAAGCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256680.10
CDS-3UTR CCA 90 bp TTGGCTCGGATTAGTGCAATCAGCTCCACGTCATACTGCACCACTGCATCCGCTTCTTTTTGGAGACTTTaGGTCTATTGGCCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: LARISAISSTSYCTTASASFWRL*VYWPFC
Trigger: ACAGAAAGGCCAATAGACCCAAAGTCTCCAAAAAGA...AGCGGATGCAGTGGTGCAGTATGACGTGGAGCTGATTGCACTAATCCGAGCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000546847.5
CDS-3UTR CCA 90 bp CCAAGTTCTATAACCAGAGGGTCTCTGGTCAGGGAGGTGTCAATAATACGTCCAACCTGGGACAGATGGTaGAAATCCCCGTTTTCCATA +
Preference number: 4 (lower is better)
Translates to: PSSITRGSLVREVSIIRPTWDRW*KSPFSI
Trigger: TATGGAAAACGGGGATTTCCACCATCTGTCCCAGGT...TGGACGTATTATTGACACCTCCCTGACCAGAGACCCTCTGGTTATAGAACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547789.1
CDS-3UTR CCA 90 bp CCAAGTTCTATAACCAGAGGGTCTCTGGTCAGGGAGGTGTCAATAATACGTCCACCTAGTCAGATTACCTaGGACAGATGGTGGAAATCC +
Preference number: 4 (lower is better)
Translates to: PSSITRGSLVREVSIIRPPSQIT*DRWWKS
Trigger: GGATTTCCACCATCTGTCCCAGGTAATCTGACTAGG...TGGACGTATTATTGACACCTCCCTGACCAGAGACCCTCTGGTTATAGAACTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547789.1
CDS-3UTR CCA 90 bp GGTACAAATAAGCAGCACTGGGAATGGGGAGGTAATAGGGCTTTGGGTAAAAGTGTAAAAGTTTCTCCTTaGTCCCCCTACCCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: GTNKQHWEWGGNRALGKSVKVSP*SPYPPS
Trigger: GGAAGGAGGGTAGGGGGACCAAGGAGAAACTTTTAC...ACTTTTACCCAAAGCCCTATTACCTCCCCATTCCCAGTGCTGCTTATTTGTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000552878.5
CDS-3UTR CCA 90 bp GGTACAAATAAGCAGCACTGGGAATGGGGAGGTAATAGGGCTTTGGGTAAAAGTAAGCAGCACTGGGAATaGGGAGGTAATAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: GTNKQHWEWGGNRALGKSKQHWE*GGNRAL
Trigger: CAAAGCCCTATTACCTCCCCATTCCCAGTGCTGCTT...ACTTTTACCCAAAGCCCTATTACCTCCCCATTCCCAGTGCTGCTTATTTGTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552878.5
CDS-3UTR TCA 90 bp ACAAATAAGCAGCACTGGGAATGGGGAGGTAATAGGGCTTTGGGTAAAAGTTTCCAGGTGGAACAGAAATaGGTGGGCAGAAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: TNKQHWEWGGNRALGKSFQVEQK*VGRRGT
Trigger: TGTACCTCTTCTGCCCACTCATTTCTGTTCCACCTG...GAAACTTTTACCCAAAGCCCTATTACCTCCCCATTCCCAGTGCTGCTTATTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552878.5
CDS-3UTR GCA 90 bp GTGGCTGTACAGCTGACACAGCGTAGAGTTGTAGAAAAGGGCAGGAAAGAAGTCAGACCTGGAATCACCTaGTTTTGGCCAAGTTCTATA +
Preference number: 4 (lower is better)
Translates to: VAVQLTQRRVVEKGRKEVRPGIT*FWPSSI
Trigger: TATAGAACTTGGCCAAAAGCAGGTGATTCCAGGTCT...GACTTCTTTCCTGCCCTTTTCTACAACTCTACGCTGTGTCAGCTGTACAGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453172.2
CDS-3UTR GCA 90 bp GTACAAATAAGCAGCACTGGGAATGGGGAGGTAATAGGGCTTTGGGTAAAAGTTGTGAGAAGGAATGATTaGCCTTCGCTTCTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: VQISSTGNGEVIGLWVKVVRRND*PSLLSH
Trigger: GTGGGAGAGAAGCGAAGGGCAATCATTCCTTCTCAC...AACTTTTACCCAAAGCCCTATTACCTCCCCATTCCCAGTGCTGCTTATTTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552878.5
CDS-3UTR CCA 90 bp AATCACCTGCTTTTGGCCAAGTTCTATAACCAGAGGGTCTCTGGTCAGGGAGGTGGAATCACCTGCTTTTaGCCAAGTTCTATAACCAGA +
Preference number: 4 (lower is better)
Translates to: NHLLLAKFYNQRVSGQGGGITCF*PSSITR
Trigger: TCTGGTTATAGAACTTGGCCAAAAGCAGGTGATTCC...ACCTCCCTGACCAGAGACCCTCTGGTTATAGAACTTGGCCAAAAGCAGGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000547789.1
CDS-3UTR CCA 90 bp GCTTCTTTTTGGAGACTTTGGGTCTATTGGCCTTTCTGTATAGGTGATACCCAAATCCGCTGGGACAGATaGTGGAAATCCCCGTTTTCC +
Preference number: 4 (lower is better)
Translates to: ASFWRLWVYWPFCIGDTQIRWDR*WKSPFS
Trigger: GGAAAACGGGGATTTCCACCATCTGTCCCAGCGGAT...TTGGGTATCACCTATACAGAAAGGCCAATAGACCCAAAGTCTCCAAAAAGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000546847.5
CDS-3UTR TCA 90 bp GTACAAATAAGCAGCACTGGGAATGGGGAGGTAATAGGGCTTTGGGTAAAAGTTGGAGGTTGTGGTGAGTaGAGATTGCACTATTGCACT +
Preference number: 4 (lower is better)
Translates to: VQISSTGNGEVIGLWVKVGGCGE*RLHYCT
Trigger: AGTGCAATAGTGCAATCTTCACTCACCACAACCTCC...AACTTTTACCCAAAGCCCTATTACCTCCCCATTCCCAGTGCTGCTTATTTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552878.5
CDS-3UTR GCA 90 bp CCAAGTTCTATAACCAGAGGGTCTCTGGTCAGGGAGGTGTCAATAATACGTCCAAGACCTGGAATCACCTaGTTTTGGCCAAGTTCTATA +
Preference number: 4 (lower is better)
Translates to: PSSITRGSLVREVSIIRPRPGIT*FWPSSI
Trigger: TATAGAACTTGGCCAAAAGCAGGTGATTCCAGGTCT...TGGACGTATTATTGACACCTCCCTGACCAGAGACCCTCTGGTTATAGAACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547789.1
CDS-3UTR GCA 90 bp GCTTCTTTTTGGAGACTTTGGGTCTATTGGCCTTTCTGTATAGGTGATACCCAACTACCAGAGGCAAAATaGCCTTCACCAGCTTTAGCC +
Preference number: 4 (lower is better)
Translates to: ASFWRLWVYWPFCIGDTQLPEAK*PSPALA
Trigger: GGCTAAAGCTGGTGAAGGGCATTTTGCCTCTGGTAG...TTGGGTATCACCTATACAGAAAGGCCAATAGACCCAAAGTCTCCAAAAAGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000546847.5
CDS-3UTR CCA 90 bp CTCCAGACCTGGAATCACCTGCTTTTGGCCAAGTTCTATAACCAGAGGGTCTCTAGACTTTGGGTCTATTaGCCTTTCTGTATAGGTGAT +
Preference number: 4 (lower is better)
Translates to: LQTWNHLLLAKFYNQRVSRLWVY*PFCIGD
Trigger: ATCACCTATACAGAAAGGCCAATAGACCCAAAGTCT...AGAGACCCTCTGGTTATAGAACTTGGCCAAAAGCAGGTGATTCCAGGTCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256680.10
CDS-3UTR CCA 90 bp AGAATTACGAGCCCAATACTCTGTGGAGTACAACACATTTTAGCTAATAGAACACAAGTTACTGGCTGCTaGAGGTCATGCCAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: RITSPILCGVQHILANRTQVTGC*RSCQVA
Trigger: GGCCACCTGGCATGACCTCCAGCAGCCAGTAACTTG...TGTTCTATTAGCTAAAATGTGTTGTACTCCACAGAGTATTGGGCTCGTAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453172.2
CDS-3UTR CCA 90 bp GGTACAAATAAGCAGCACTGGGAATGGGGAGGTAATAGGGCTTTGGGTAAAAGTATCTGGGACAGATGGTaGAAATCCCCGTTTTCCATA +
Preference number: 4 (lower is better)
Translates to: GTNKQHWEWGGNRALGKSIWDRW*KSPFSI
Trigger: TATGGAAAACGGGGATTTCCACCATCTGTCCCAGAT...ACTTTTACCCAAAGCCCTATTACCTCCCCATTCCCAGTGCTGCTTATTTGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000552878.5
CDS-3UTR CCA 90 bp AAATGCCCTTCACCAGCTTTAGCCAGTAGTTGGCTCGGATTAGTGCAATCAGCTAGACTTTGGGTCTATTaGCCTTTCTGTATAGGTGAT +
Preference number: 4 (lower is better)
Translates to: KCPSPALASSWLGLVQSARLWVY*PFCIGD
Trigger: ATCACCTATACAGAAAGGCCAATAGACCCAAAGTCT...AGCTGATTGCACTAATCCGAGCCAACTACTGGCTAAAGCTGGTGAAGGGCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000546847.5
CDS-3UTR CCA 90 bp ACAAATAAGCAGCACTGGGAATGGGGAGGTAATAGGGCTTTGGGTAAAAGTTTCGGAATCACCTGCTTTTaGCCAAGTTCTATAACCAGA +
Preference number: 4 (lower is better)
Translates to: TNKQHWEWGGNRALGKSFGITCF*PSSITR
Trigger: TCTGGTTATAGAACTTGGCCAAAAGCAGGTGATTCC...GAAACTTTTACCCAAAGCCCTATTACCTCCCCATTCCCAGTGCTGCTTATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000552878.5
CDS-3UTR GCA 90 bp AGAATTACGAGCCCAATACTCTGTGGAGTACAACACATTTTAGCTAATAGAACAGTGAGAAGGAATGATTaGCCTTCGCTTCTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: RITSPILCGVQHILANRTVRRND*PSLLSH
Trigger: GTGGGAGAGAAGCGAAGGGCAATCATTCCTTCTCAC...TGTTCTATTAGCTAAAATGTGTTGTACTCCACAGAGTATTGGGCTCGTAATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453172.2
CDS-3UTR CCA 90 bp GCTTCTTTTTGGAGACTTTGGGTCTATTGGCCTTTCTGTATAGGTGATACCCAAGGAATCACCTGCTTTTaGCCAAGTTCTATAACCAGA +
Preference number: 4 (lower is better)
Translates to: ASFWRLWVYWPFCIGDTQGITCF*PSSITR
Trigger: TCTGGTTATAGAACTTGGCCAAAAGCAGGTGATTCC...TTGGGTATCACCTATACAGAAAGGCCAATAGACCCAAAGTCTCCAAAAAGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000546847.5
CDS-3UTR TCA 90 bp AGCCCAATACTCTGTGGAGTACAACACATTTTAGCTAATAGAACATTTGTTAGATTACTGTCTCTTCCCTaGTGGAGGCTGAAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: SPILCGVQHILANRTFVRLLSLP*WRLKGR
Trigger: CCTTCCTTTCAGCCTCCATCAGGGAAGAGACAGTAA...TCTAACAAATGTTCTATTAGCTAAAATGTGTTGTACTCCACAGAGTATTGGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453172.2
CDS-3UTR CCA 90 bp AGCCCAATACTCTGTGGAGTACAACACATTTTAGCTAATAGAACATTTGTTAGACCCTGGGACAGATGGTaGAAATCCCCGTTTTCCATA +
Preference number: 4 (lower is better)
Translates to: SPILCGVQHILANRTFVRPWDRW*KSPFSI
Trigger: TATGGAAAACGGGGATTTCCACCATCTGTCCCAGGG...TCTAACAAATGTTCTATTAGCTAAAATGTGTTGTACTCCACAGAGTATTGGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000453172.2
CDS-3UTR CCA 90 bp AATCAACCAACCAATGAGCACATTCAACGTGATTATGAGATAACAGGAGTTTCAACAAATAAGCAGCACTaGGAATGGGGAGGTAATAGG +
Preference number: 4 (lower is better)
Translates to: NQPTNEHIQRDYEITGVSTNKQH*EWGGNR
Trigger: CCTATTACCTCCCCATTCCCAGTGCTGCTTATTTGT...TGAAACTCCTGTTATCTCATAATCACGTTGAATGTGCTCATTGGTTGGTTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552878.5
CDS-3UTR TCA 90 bp AGAATTACGAGCCCAATACTCTGTGGAGTACAACACATTTTAGCTAATAGAACAATCGGCAGTGACCAATaGTGGCTTTTAAAGTTATGG +
Preference number: 4 (lower is better)
Translates to: RITSPILCGVQHILANRTIGSDQ*WLLKLW
Trigger: CCATAACTTTAAAAGCCATCATTGGTCACTGCCGAT...TGTTCTATTAGCTAAAATGTGTTGTACTCCACAGAGTATTGGGCTCGTAATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453172.2
CDS-3UTR CCA 90 bp AGCCCAATACTCTGTGGAGTACAACACATTTTAGCTAATAGAACATTTGTTAGAGAGCCCAATACTCTGTaGAGTACAACACATTTTAGC +
Preference number: 4 (lower is better)
Translates to: SPILCGVQHILANRTFVREPNTL*STTHFS
Trigger: GCTAAAATGTGTTGTACTCCACAGAGTATTGGGCTC...TCTAACAAATGTTCTATTAGCTAAAATGTGTTGTACTCCACAGAGTATTGGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453172.2
CDS-3UTR CCA 90 bp AGCCCAATACTCTGTGGAGTACAACACATTTTAGCTAATAGAACATTTGTTAGATGGCTTTTAAAGTTATaGGGCAGACTTGGCTTTAAC +
Preference number: 4 (lower is better)
Translates to: SPILCGVQHILANRTFVRWLLKL*GRLGFN
Trigger: GTTAAAGCCAAGTCTGCCCCATAACTTTAAAAGCCA...TCTAACAAATGTTCTATTAGCTAAAATGTGTTGTACTCCACAGAGTATTGGGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453172.2
CDS CCA 90 bp TCAGCCCGGCACACCGCCGCACTGAGCAGCAGCAGCAGCAGCAGATaGAGCGGGAGGAGTGAGGGGCGCAGGGTCATGACTGGGCGCGGG +
Preference number: 5 (lower is better)
Translates to: SARHTAALSSSSSSR*SGRSEGRRVMTGRG
Trigger: CCCGCGCCCAGTCATGACCCTGCGCCCCTCACTCCTCCCGCTCCATCTGCTGCTGCTGCTGCTGCTCAGTGCGGCGGTGTGCCGGGCTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256680.10
ENST00000453172.2
ENST00000547789.1
ENST00000550765.6
ENST00000551694.5
ENST00000551807.1
ENST00000552878.5
ENST00000553027.1
CDS CCA 90 bp ACGGGGGCTGAGGGTCGGGACTATCTCCTCACCAGGGTCTCCACTTaGAGGGTCCGGACGGGACTTTCGGTTTCGAGCCCAGCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: TGAEGRDYLLTRVST*RVRTGLSVSSPASA
Trigger: GGCTGAGGCTGGGCTCGAAACCGAAAGTCCCGTCCGGACCCTCCAAGTGGAGACCCTGGTGAGGAGATAGTCCCGACCCTCAGCCCCCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553027.1
CDS TCA 90 bp CAACTCAGTTCCCGCACTTCCTCTCCTCCCGGCTCCCAGGTTCGCTaGGACCCCAGTATTACCACCCAACAAGGCTCGGCCCACGGGGGC +
Preference number: 5 (lower is better)
Translates to: QLSSRTSSPPGSQVR*DPSITTQQGSAHGG
Trigger: GCCCCCGTGGGCCGAGCCTTGTTGGGTGGTAATACTGGGGTCTCAGCGAACCTGGGAGCCGGGAGGAGAGGAAGTGCGGGAACTGAGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553027.1
CDS GCA 90 bp GTGCTCGACGACCCCAGAGCCCCGAGTTTCTTCTCCCGAACCGCTTaGCACGTGTCCAAGCCAAAGCTGACGTGTTTCAGCAGGGCGCCG +
Preference number: 5 (lower is better)
Translates to: VLDDPRAPSFFSRTA*HVSKPKLTCFSRAP
Trigger: CGGCGCCCTGCTGAAACACGTCAGCTTTGGCTTGGACACGTGGCAAGCGGTTCGGGAGAAGAAACTCGGGGCTCTGGGGTCGTCGAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000551807.1
ENST00000553027.1
CDS-3UTR CAA 90 bp GTTCTGGGAAAGGTGGTGGCACAGGCAGCAGACCCATGTGGCCCAAGCAGGTCTCACCAGGGTCTCCACTaGGAGGGTCCGGACGGGACT +
Preference number: 5 (lower is better)
Translates to: VLGKVVAQAADPCGPSRSHQGLH*EGPDGT
Trigger: AGTCCCGTCCGGACCCTCCAAGTGGAGACCCTGGTG...AGACCTGCTTGGGCCACATGGGTCTGCTGCCTGTGCCACCACCTTTCCCAGAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453172.2
CDS GCA 90 bp CAGGAAGCCCCAGAAGGCTGGCGCTTCTCGGAGATCTCTCCACCCTaGACTTCTCCGTGCCAGGTAGGAACTGGCAGAAAAGCAAGGAGG +
Preference number: 5 (lower is better)
Translates to: QEAPEGWRFSEISPP*TSPCQVGTGRKARR
Trigger: CCTCCTTGCTTTTCTGCCAGTTCCTACCTGGCACGGAGAAGTGCAGGGTGGAGAGATCTCCGAGAAGCGCCAGCCTTCTGGGGCTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444214.6
ENST00000553027.1
CDS GCA 90 bp TTCTCCTGCTTAAGGAGTGAGGATGGCCGAGAAAGCCTCTACCCATaGAAAGGGGGTACCCAGGCCCACCCCTGCCGAGATACTCACCCC +
Preference number: 5 (lower is better)
Translates to: FSCLRSEDGRESLYP*KGGTQAHPCRDTHP
Trigger: GGGGTGAGTATCTCGGCAGGGGTGGGCCTGGGTACCCCCTTTGCATGGGTAGAGGCTTTCTCGGCCATCCTCACTCCTTAAGCAGGAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000549084.1
ENST00000551694.5
ENST00000553027.1
CDS CCA 90 bp TATGTGAAGCGTGTCTCCAAAAGCAGCGGGCTCGGCACATGGTTCTaGGGGCTCCACCTACGATCGGACAGGGTCTCCACTTGGAGGGTC +
Preference number: 5 (lower is better)
Translates to: YVKRVSKSSGLGTWF*GLHLRSDRVSTWRV
Trigger: GACCCTCCAAGTGGAGACCCTGTCCGATCGTAGGTGGAGCCCCCAGAACCATGTGCCGAGCCCGCTGCTTTTGGAGACACGCTTCACATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547789.1
ENST00000551807.1
CDS CCA 90 bp ATCTACCAAGCTTCCCGCTGTAAGGAACAGGAAGCCCCAGAAGGCTaGCGCTTCTCGGAGATCTCTCCACCCTGCACTTCTCCGTGCCAG +
Preference number: 5 (lower is better)
Translates to: IYQASRCKEQEAPEG*RFSEISPPCTSPCQ
Trigger: CTGGCACGGAGAAGTGCAGGGTGGAGAGATCTCCGAGAAGCGCCAGCCTTCTGGGGCTTCCTGTTCCTTACAGCGGGAAGCTTGGTAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444214.6
CDS CCA 90 bp GTAGTGTATGTGAAGCGTGTCTCCAAAAGCAGCGGGCTCGGCACATaGTTCTGGGGGCTCCACCTACGATCGGACAGGGTCTCCACTTGG +
Preference number: 5 (lower is better)
Translates to: VVYVKRVSKSSGLGT*FWGLHLRSDRVSTW
Trigger: CCAAGTGGAGACCCTGTCCGATCGTAGGTGGAGCCCCCAGAACCATGTGCCGAGCCCGCTGCTTTTGGAGACACGCTTCACATACACTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547789.1
ENST00000551807.1
CDS TCA 90 bp GGCACAGGGTGCTCAGGATGTGCCCAAGGTCATCAGGCTAGGTGGTaGCAGAGACAGGATTCAAACCCAGGACTGCCTGAGTCCAACGTG +
Preference number: 5 (lower is better)
Translates to: GTGCSGCAQGHQARW*QRQDSNPGLPESNV
Trigger: CACGTTGGACTCAGGCAGTCCTGGGTTTGAATCCTGTCTCTGTCACCACCTAGCCTGATGACCTTGGGCACATCCTGAGCACCCTGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553027.1
CDS CCA 90 bp GTCCAGTGTTCTGGGAAAGGTGGTGGCACAGGCAGCAGACCCATGTaGCCCAAGCAGGTCTCTTCCCTAACAAGTTACTGGCTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: VQCSGKGGGTGSRPM*PKQVSSLTSYWLLE
Trigger: CTCCAGCAGCCAGTAACTTGTTAGGGAAGAGACCTGCTTGGGCCACATGGGTCTGCTGCCTGTGCCACCACCTTTCCCAGAACACTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000453172.2
ENST00000546671.5
ENST00000551694.5
ENST00000553027.1
CDS CCA 90 bp CGTGGTTGCTGTCTGTTCTTCCAAGTCGTCTCCTTGTGGCTATCCTaGCAGTGTCTGGCTGGCAGACCCCACCCAGGCAGTTCTCATTCC +
Preference number: 5 (lower is better)
Translates to: RGCCLFFQVVSLWLS*QCLAGRPHPGSSHS
Trigger: GGAATGAGAACTGCCTGGGTGGGGTCTGCCAGCCAGACACTGCCAGGATAGCCACAAGGAGACGACTTGGAAGAACAGACAGCAACCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553027.1
CDS-3UTR CAA 90 bp GCTTTAGCCAGTAGTTGGCTCGGATTAGTGCAATCAGCTCCACGTCATACTGCACCCCAGGGTCTCCACTaGGAGGGTCCGGACGGGACT +
Preference number: 5 (lower is better)
Translates to: ALASSWLGLVQSAPRHTAPQGLH*EGPDGT
Trigger: AGTCCCGTCCGGACCCTCCAAGTGGAGACCCTGGGG...TGCAGTATGACGTGGAGCTGATTGCACTAATCCGAGCCAACTACTGGCTAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256680.10
CDS-3UTR CAA 90 bp ACCTGCTTTTGGCCAAGTTCTATAACCAGAGGGTCTCTGGTCAGGGAGGTGTCAGGACAGGGTCTCCACTaGGAGGGTCCGGACGGGACT +
Preference number: 5 (lower is better)
Translates to: TCFWPSSITRGSLVREVSGQGLH*EGPDGT
Trigger: AGTCCCGTCCGGACCCTCCAAGTGGAGACCCTGTCC...TGACACCTCCCTGACCAGAGACCCTCTGGTTATAGAACTTGGCCAAAAGCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547789.1
CDS TCA 90 bp CAGCGCAAGAGGCACAGAGGCTTTGAATGCCCTCAGAGGTCCCACTaGCCTGGACCTGTCCAGTGGGAAGCAGGGTCCTTTATTCCACAT +
Preference number: 5 (lower is better)
Translates to: QRKRHRGFECPQRSH*PGPVQWEAGSFIPH
Trigger: ATGTGGAATAAAGGACCCTGCTTCCCACTGGACAGGTCCAGGTCAGTGGGACCTCTGAGGGCATTCAAAGCCTCTGTGCCTCTTGCGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000549084.1
ENST00000551694.5
ENST00000553027.1
CDS TCA 90 bp GGTCATGCCAGGTGGCCTCATCAGGTTGTCTTTAGTCCCTGTTGGTaGTATGAGGAGGAAAAAGGTGGCCCTGTAGATGGAGGCCCCAGC +
Preference number: 5 (lower is better)
Translates to: GHARWPHQVVFSPCW*YEEEKGGPVDGGPS
Trigger: GCTGGGGCCTCCATCTACAGGGCCACCTTTTTCCTCCTCATATCACCAACAGGGACTAAAGACAACCTGATGAGGCCACCTGGCATGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000546671.5
ENST00000551694.5
ENST00000553027.1
CDS GCA 90 bp CCCAGGGAACAGAGAGAACAGCTAGGCAACTACCAGGAGGCTCACTaGTCAATTAAGCATCCCTCCTCAGAATCAGGGCACCATGAGAGC +
Preference number: 5 (lower is better)
Translates to: PREQREQLGNYQEAH*SIKHPSSESGHHES
Trigger: GCTCTCATGGTGCCCTGATTCTGAGGAGGGATGCTTAATTGAGCAGTGAGCCTCCTGGTAGTTGCCTAGCTGTTCTCTCTGTTCCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553027.1
CDS-3UTR CAA 90 bp CCCAATGAGGCCCAGGAGGGCTGGCACCATGGCCATCCCTACCAGAGGCAAAATTGGAATCACCTGCTTTaGGCCAAGTTCTATAACCAG +
Preference number: 5 (lower is better)
Translates to: PNEAQEGWHHGHPYQRQNWNHLL*AKFYNQ
Trigger: CTGGTTATAGAACTTGGCCAAAAGCAGGTGATTCCA...ATTTTGCCTCTGGTAGGGATGGCCATGGTGCCAGCCCTCCTGGGCCTCATTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000546847.5
CDS-3UTR CAA 90 bp GGTACAAATAAGCAGCACTGGGAATGGGGAGGTAATAGGGCTTTGGGTAAAAGTCACCAGGGTCTCCACTaGGAGGGTCCGGACGGGACT +
Preference number: 5 (lower is better)
Translates to: GTNKQHWEWGGNRALGKSHQGLH*EGPDGT
Trigger: AGTCCCGTCCGGACCCTCCAAGTGGAGACCCTGGTG...ACTTTTACCCAAAGCCCTATTACCTCCCCATTCCCAGTGCTGCTTATTTGTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552878.5
CDS TCA 90 bp AGTGGGAAGCAGGGTCCTTTATTCCACATTCTCCTGCTTAAGGAGTaGGGATGGCCGAGAAAGCCTCTACCCATGCAAAGGGGGTACCCA +
Preference number: 5 (lower is better)
Translates to: SGKQGPLFHILLLKE*GWPRKPLPMQRGYP
Trigger: TGGGTACCCCCTTTGCATGGGTAGAGGCTTTCTCGGCCATCCTCACTCCTTAAGCAGGAGAATGTGGAATAAAGGACCCTGCTTCCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000549084.1
ENST00000551694.5
ENST00000553027.1
CDS GCA 90 bp GGAAGAGGTGGAATGGGAGGCACAGGTCACATACCTGGAATCACCTaGTTTTGGCCAAGTTCTATAACCAGAGGGTCTCTGGTCAGGGAG +
Preference number: 5 (lower is better)
Translates to: GRGGMGGTGHIPGIT*FWPSSITRGSLVRE
Trigger: CTCCCTGACCAGAGACCCTCTGGTTATAGAACTTGGCCAAAAGCAGGTGATTCCAGGTATGTGACCTGTGCCTCCCATTCCACCTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553027.1
CDS CCA 90 bp GGTGACAGAGACAGGATTCAAACCCAGGACTGCCTGAGTCCAACGTaGTTGCTGTCTGTTCTTCCAAGTCGTCTCCTTGTGGCTATCCTG +
Preference number: 5 (lower is better)
Translates to: GDRDRIQTQDCLSPT*LLSVLPSRLLVAIL
Trigger: CAGGATAGCCACAAGGAGACGACTTGGAAGAACAGACAGCAACCACGTTGGACTCAGGCAGTCCTGGGTTTGAATCCTGTCTCTGTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553027.1
CDS CCA 90 bp GGTGGAATGGGAGGCACAGGTCACATACCTGGAATCACCTGCTTTTaGCCAAGTTCTATAACCAGAGGGTCTCTGGTCAGGGAGGTGTCA +
Preference number: 5 (lower is better)
Translates to: GGMGGTGHIPGITCF*PSSITRGSLVREVS
Trigger: TGACACCTCCCTGACCAGAGACCCTCTGGTTATAGAACTTGGCCAAAAGCAGGTGATTCCAGGTATGTGACCTGTGCCTCCCATTCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553027.1
CDS-3UTR CAA 90 bp CCAGGAGGGCTGGCACCATGGCCATCCCTACCAGAGGCAAAATGCCCTTCACCATTCTTTTTGGAGACTTaGGGTCTATTGGCCTTTCTG +
Preference number: 5 (lower is better)
Translates to: PGGLAPWPSLPEAKCPSPFFLET*GLLAFL
Trigger: CAGAAAGGCCAATAGACCCAAAGTCTCCAAAAAGAA...TGGTGAAGGGCATTTTGCCTCTGGTAGGGATGGCCATGGTGCCAGCCCTCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000546847.5
CDS-3UTR CAA 90 bp GTCCAGTGTTCTGGGAAAGGTGGTGGCACAGGCAGCAGACCCATGTGGCCCAAGAGTTATGGGGCAGACTaGGCTTTAACAGTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: VQCSGKGGGTGSRPMWPKSYGAD*ALTVAF
Trigger: AAAAGCAACTGTTAAAGCCAAGTCTGCCCCATAACT...CTTGGGCCACATGGGTCTGCTGCCTGTGCCACCACCTTTCCCAGAACACTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453172.2
CDS-3UTR CAA 90 bp TGGGCAGAAGAGGTACAAATAAGCAGCACTGGGAATGGGGAGGTAATAGGGCTTAGACAGGAGAATTGCTaGAACCCGGGTGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: WAEEVQISSTGNGEVIGLRQENC*NPGGGG
Trigger: ACCTCCGCCACCCGGGTTCAAGCAATTCTCCTGTCT...AAGCCCTATTACCTCCCCATTCCCAGTGCTGCTTATTTGTACCTCTTCTGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552878.5
CDS GCA 90 bp TGGACCTGTCCAGTGGGAAGCAGGGTCCTTTATTCCACATTCTCCTaGTTAAGGAGTGAGGATGGCCGAGAAAGCCTCTACCCATGCAAA +
Preference number: 5 (lower is better)
Translates to: WTCPVGSRVLYSTFS*LRSEDGRESLYPCK
Trigger: TTTGCATGGGTAGAGGCTTTCTCGGCCATCCTCACTCCTTAAGCAGGAGAATGTGGAATAAAGGACCCTGCTTCCCACTGGACAGGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000549084.1
ENST00000551694.5
ENST00000553027.1
CDS GCA 90 bp TGGTGGAAATCCCCGTTTTCCATAGGCCAAGTGAGAAGGAATGATTaGCCTTCGCTTCTCTCTGAGGGAAGGAATGTCAGTCACAGCCAG +
Preference number: 5 (lower is better)
Translates to: WWKSPFSIGQVRRND*PSLLSEGRNVSHSQ
Trigger: CTGGCTGTGACTGACATTCCTTCCCTCAGAGAGAAGCGAAGGGCAATCATTCCTTCTCACTTGGCCTATGGAAAACGGGGATTTCCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000546847.5
ENST00000551694.5
ENST00000553027.1
CDS CCA 90 bp GATGGCCTGAGAGAGAGTCCTAGTCAGATTACCTGGGACAGATGGTaGAAATCCCCGTTTTCCATAGGCCAAGTGAGAAGGAATGATTGC +
Preference number: 5 (lower is better)
Translates to: DGLRESPSQITWDRW*KSPFSIGQVRRNDC
Trigger: GCAATCATTCCTTCTCACTTGGCCTATGGAAAACGGGGATTTCCACCATCTGTCCCAGGTAATCTGACTAGGACTCTCTCTCAGGCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000546671.5
ENST00000551694.5
ENST00000553027.1
CDS-3UTR CAA 90 bp CCTTCGCTTCTCTCCCACACACATGTCGAGAAGACTCTGCTCCAGACCTGGAATTGGAATCACCTGCTTTaGGCCAAGTTCTATAACCAG +
Preference number: 5 (lower is better)
Translates to: PSLLSHTHVEKTLLQTWNWNHLL*AKFYNQ
Trigger: CTGGTTATAGAACTTGGCCAAAAGCAGGTGATTCCA...ATTCCAGGTCTGGAGCAGAGTCTTCTCGACATGTGTGTGGGAGAGAAGCGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000547789.1
CDS-3UTR CAA 90 bp TTGGCTCGGATTAGTGCAATCAGCTCCACGTCATACTGCACCACTGCATCCGCTTTCTTTTTGGAGACTTaGGGTCTATTGGCCTTTCTG +
Preference number: 5 (lower is better)
Translates to: LARISAISSTSYCTTASAFFLET*GLLAFL
Trigger: CAGAAAGGCCAATAGACCCAAAGTCTCCAAAAAGAA...AGCGGATGCAGTGGTGCAGTATGACGTGGAGCTGATTGCACTAATCCGAGCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000546847.5
CDS-3UTR CAA 90 bp TGGCTCGGATTAGTGCAATCAGCTCCACGTCATACTGCACCACTGCATCCGCTGTTTCGTTTCTCTTCCTaGAGCTTCTTTTTGGAGACT +
Preference number: 5 (lower is better)
Translates to: WLGLVQSAPRHTAPLHPLFRFSS*SFFLET
Trigger: AGTCTCCAAAAAGAAGCTCAAGGAAGAGAAACGAAA...CAGCGGATGCAGTGGTGCAGTATGACGTGGAGCTGATTGCACTAATCCGAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000546847.5
CDS-3UTR CAA 90 bp GGTACAAATAAGCAGCACTGGGAATGGGGAGGTAATAGGGCTTTGGGTAAAAGTGGTAAAAGTTTCTCCTaGGTCCCCCTACCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: GTNKQHWEWGGNRALGKSGKSFS*VPLPSF
Trigger: GAAGGAGGGTAGGGGGACCAAGGAGAAACTTTTACC...ACTTTTACCCAAAGCCCTATTACCTCCCCATTCCCAGTGCTGCTTATTTGTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000552878.5
CDS-3UTR CAA 90 bp ACTGGGAATGGGGAGGTAATAGGGCTTTGGGTAAAAGTTTCTCCTTGGTCCCCCGGAGGTAATAGGGCTTaGGGTAAAAGTTTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: TGNGEVIGLWVKVSPWSPGGNRA*GKSFSL
Trigger: CAAGGAGAAACTTTTACCCAAAGCCCTATTACCTCC...GGGGGACCAAGGAGAAACTTTTACCCAAAGCCCTATTACCTCCCCATTCCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000552878.5
CDS CCA 90 bp TTTGATGGCCTGAGAGAGAGTCCTAGTCAGATTACCTGGGACAGATaGTGGAAATCCCCGTTTTCCATAGGCCAAGTGAGAAGGAATGAT +
Preference number: 5 (lower is better)
Translates to: FDGLRESPSQITWDR*WKSPFSIGQVRRND
Trigger: ATCATTCCTTCTCACTTGGCCTATGGAAAACGGGGATTTCCACCATCTGTCCCAGGTAATCTGACTAGGACTCTCTCTCAGGCCATCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000546671.5
ENST00000551694.5
ENST00000553027.1
CDS TCA 90 bp GTGGAGAGGGTTAGACTCTCTGCATTTTATCCAGGGCTCAGAATCTaGATGAAAATAGGGAGCGTAGGCCACAGCAAAGCCAACAACTAT +
Preference number: 5 (lower is better)
Translates to: VERVRLSAFYPGLRI*MKIGSVGHSKANNY
Trigger: ATAGTTGTTGGCTTTGCTGTGGCCTACGCTCCCTATTTTCATTCAGATTCTGAGCCCTGGATAAAATGCAGAGAGTCTAACCCTCTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000551694.5
ENST00000553027.1
CDS-3UTR CAA 90 bp AGAAGACTCTGCTCCAGACCTGGAATCACCTGCTTTTGGCCAAGTTCTATAACCTGGAATCACCTGCTTTaGGCCAAGTTCTATAACCAG +
Preference number: 5 (lower is better)
Translates to: RRLCSRPGITCFWPSSITWNHLL*AKFYNQ
Trigger: CTGGTTATAGAACTTGGCCAAAAGCAGGTGATTCCA...GGTTATAGAACTTGGCCAAAAGCAGGTGATTCCAGGTCTGGAGCAGAGTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000547789.1
CDS CCA 90 bp CCTGTAGATGGAGGCCCCAGCCACTCCTATCTGTCTAAACAAACTTaGTCTGGATCTTCTCAAGCATCAAACAAAGTATATAGCTCCTTA +
Preference number: 5 (lower is better)
Translates to: PVDGGPSHSYLSKQT*SGSSQASNKVYSSL
Trigger: TAAGGAGCTATATACTTTGTTTGATGCTTGAGAAGATCCAGACCAAGTTTGTTTAGACAGATAGGAGTGGCTGGGGCCTCCATCTACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546671.5
ENST00000551694.5
ENST00000553027.1
CDS-3UTR CAA 90 bp AAATCCCCGTTTTCCATAGGCCAAGTGAGAAGGAATGATTGCCCTTCGCTTCTCTTTCGTTTCTCTTCCTaGAGCTTCTTTTTGGAGACT +
Preference number: 5 (lower is better)
Translates to: KSPFSIGQVRRNDCPSLLFRFSS*SFFLET
Trigger: AGTCTCCAAAAAGAAGCTCAAGGAAGAGAAACGAAA...GAGAAGCGAAGGGCAATCATTCCTTCTCACTTGGCCTATGGAAAACGGGGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000256680.10
ENST00000546847.5
CDS-3UTR CAA 90 bp AGAATTACGAGCCCAATACTCTGTGGAGTACAACACATTTTAGCTAATAGAACAGGTGGCCTCATCAGGTaGTCTTTAGTCCCTGGGACA +
Preference number: 5 (lower is better)
Translates to: RITSPILCGVQHILANRTGGLIR*SLVPGT
Trigger: TGTCCCAGGGACTAAAGACAACCTGATGAGGCCACC...TGTTCTATTAGCTAAAATGTGTTGTACTCCACAGAGTATTGGGCTCGTAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453172.2
CDS TCA 90 bp GAAAAGAGCAAGGAGCTGTTATCCTGTAAGAACAGGGTAAATCCCTaGTCTTTTCCTCTGGTGCTACTATTTCCTTTCTCCTTTCATCAA +
Preference number: 5 (lower is better)
Translates to: EKSKELLSCKNRVNP*SFPLVLLFPFSFHQ
Trigger: TTGATGAAAGGAGAAAGGAAATAGTAGCACCAGAGGAAAAGATCAGGGATTTACCCTGTTCTTACAGGATAACAGCTCCTTGCTCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553027.1
CDS-3UTR CAA 90 bp AGAATTACGAGCCCAATACTCTGTGGAGTACAACACATTTTAGCTAATAGAACATGGAATCACCTGCTTTaGGCCAAGTTCTATAACCAG +
Preference number: 5 (lower is better)
Translates to: RITSPILCGVQHILANRTWNHLL*AKFYNQ
Trigger: CTGGTTATAGAACTTGGCCAAAAGCAGGTGATTCCA...TGTTCTATTAGCTAAAATGTGTTGTACTCCACAGAGTATTGGGCTCGTAATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453172.2
CDS-3UTR CAA 90 bp AGCCCAATACTCTGTGGAGTACAACACATTTTAGCTAATAGAACATTTGTTAGACAAAAGATATGCATCTaGGGAAATCTGTCCATCTCA +
Preference number: 5 (lower is better)
Translates to: SPILCGVQHILANRTFVRQKICI*GNLSIS
Trigger: TGAGATGGACAGATTTCCCAAGATGCATATCTTTTG...TCTAACAAATGTTCTATTAGCTAAAATGTGTTGTACTCCACAGAGTATTGGGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453172.2
CDS CCA 72 bp CCCTCCCAGCAGGCGCGCAACACACACCTGGACCGCTaGGCGGCGGCAGCCCCCTTAGTGCGGCAGCCTAGC +
Preference number: 6 (lower is better)
Translates to: PSQQARNTHLDR*AAAAPLVRQPS
Trigger: GCTAGGCTGCCGCACTAAGGGGGCTGCCGCCGCCCAGCGGTCCAGGTGTGTGTTGCGCGCCTGCTGGGAGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546671.5
ENST00000553027.1
CDS TCA 72 bp TTTCGAGCCCAGCCTCAGCCCGGCACACCGCCGCACTaGGCAGCAGCAGCAGCAGCAGATGGAGCGGGAGGA +
Preference number: 6 (lower is better)
Translates to: FRAQPQPGTPPH*AAAAAADGAGG
Trigger: TCCTCCCGCTCCATCTGCTGCTGCTGCTGCTGCTCAGTGCGGCGGTGTGCCGGGCTGAGGCTGGGCTCGAAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256680.10
ENST00000453172.2
ENST00000547789.1
ENST00000550765.6
ENST00000551694.5
ENST00000551807.1
ENST00000552878.5
ENST00000553027.1
CDS TCA 72 bp TCTCCCGAACCGCTTGCCACGTGTCCAAGCCAAAGCTaGCGTGTTTCAGCAGGGCGCCGCCCCCTCCCAGGC +
Preference number: 6 (lower is better)
Translates to: SPEPLATCPSQS*RVSAGRRPLPG
Trigger: GCCTGGGAGGGGGCGGCGCCCTGCTGAAACACGTCAGCTTTGGCTTGGACACGTGGCAAGCGGTTCGGGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000551807.1
ENST00000553027.1
CDS CCA 72 bp CACACCGCCGCACTGAGCAGCAGCAGCAGCAGCAGATaGAGCGGGAGGAGTGAGGGGCGCAGGGTCATGACT +
Preference number: 6 (lower is better)
Translates to: HTAALSSSSSSR*SGRSEGRRVMT
Trigger: AGTCATGACCCTGCGCCCCTCACTCCTCCCGCTCCATCTGCTGCTGCTGCTGCTGCTCAGTGCGGCGGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256680.10
ENST00000453172.2
ENST00000547789.1
ENST00000550765.6
ENST00000551694.5
ENST00000551807.1
ENST00000552878.5
ENST00000553027.1
CDS TCA 72 bp TCCCGCACTTCCTCTCCTCCCGGCTCCCAGGTTCGCTaGGACCCCAGTATTACCACCCAACAAGGCTCGGCC +
Preference number: 6 (lower is better)
Translates to: SRTSSPPGSQVR*DPSITTQQGSA
Trigger: GGCCGAGCCTTGTTGGGTGGTAATACTGGGGTCTCAGCGAACCTGGGAGCCGGGAGGAGAGGAAGTGCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553027.1
CDS CCA 72 bp GCACATGGTTCTGGGGGCTCCACCAGGGTCTCCACTTaGAGGGTCCGGACGGGACTTTCGGTTTCGAGCCCA +
Preference number: 6 (lower is better)
Translates to: AHGSGGSTRVST*RVRTGLSVSSP
Trigger: TGGGCTCGAAACCGAAAGTCCCGTCCGGACCCTCCAAGTGGAGACCCTGGTGGAGCCCCCAGAACCATGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000453172.2
ENST00000550765.6
ENST00000551694.5
ENST00000552878.5
CDS CCA 72 bp TGGGGGCTCCACCTACGATCGGACAGGGTCTCCACTTaGAGGGTCCGGACGGGACTTTCGGTTTCGAGCCCA +
Preference number: 6 (lower is better)
Translates to: WGLHLRSDRVST*RVRTGLSVSSP
Trigger: TGGGCTCGAAACCGAAAGTCCCGTCCGGACCCTCCAAGTGGAGACCCTGTCCGATCGTAGGTGGAGCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000547789.1
ENST00000551807.1
CDS CAA 90 bp CGTGCTCGACGACCCCAGAGCCCCGAGTTTCTTCTCCCGAACCGCTaGCCACGTGTCCAAGCCAAAGCTGACGTGTTTCAGCAGGGCGCC +
Preference number: 6 (lower is better)
Translates to: RARRPQSPEFLLPNR*PRVQAKADVFQQGA
Trigger: GGCGCCCTGCTGAAACACGTCAGCTTTGGCTTGGACACGTGGCAAGCGGTTCGGGAGAAGAAACTCGGGGCTCTGGGGTCGTCGAGCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000551807.1
ENST00000553027.1
CDS TCA 72 bp AGTATTACCACCCAACAAGGCTCGGCCCACGGGGGCTaGGGGTCGGGACTATCTCCTCACCAGGGTCTCCAC +
Preference number: 6 (lower is better)
Translates to: SITTQQGSAHGG*GSGLSPHQGLH
Trigger: GTGGAGACCCTGGTGAGGAGATAGTCCCGACCCTCAGCCCCCGTGGGCCGAGCCTTGTTGGGTGGTAATACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553027.1
CDS CCA 72 bp GTGAAGCGTGTCTCCAAAAGCAGCGGGCTCGGCACATaGTTCTGGGGGCTCCACCAGGGTCTCCACTTGGAG +
Preference number: 6 (lower is better)
Translates to: VKRVSKSSGLGT*FWGLHQGLHLE
Trigger: CTCCAAGTGGAGACCCTGGTGGAGCCCCCAGAACCATGTGCCGAGCCCGCTGCTTTTGGAGACACGCTTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000453172.2
ENST00000550765.6
ENST00000551694.5
ENST00000552878.5
CDS CCA 72 bp GAGGGTCGGGACTATCTCCTCACCAGGGTCTCCACTTaGAGGGTCCGGACGGGACTTTCGGTTTCGAGCCCA +
Preference number: 6 (lower is better)
Translates to: EGRDYLLTRVST*RVRTGLSVSSP
Trigger: TGGGCTCGAAACCGAAAGTCCCGTCCGGACCCTCCAAGTGGAGACCCTGGTGAGGAGATAGTCCCGACCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553027.1
CDS CCA 72 bp CGTGTCTCCAAAAGCAGCGGGCTCGGCACATGGTTCTaGGGGCTCCACCTACGATCGGACAGGGTCTCCACT +
Preference number: 6 (lower is better)
Translates to: RVSKSSGLGTWF*GLHLRSDRVST
Trigger: AGTGGAGACCCTGTCCGATCGTAGGTGGAGCCCCCAGAACCATGTGCCGAGCCCGCTGCTTTTGGAGACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547789.1
ENST00000551807.1
CDS CCA 72 bp GTGAAGCGTGTCTCCAAAAGCAGCGGGCTCGGCACATaGTTCTGGGGGCTCCACCTACGATCGGACAGGGTC +
Preference number: 6 (lower is better)
Translates to: VKRVSKSSGLGT*FWGLHLRSDRV
Trigger: GACCCTGTCCGATCGTAGGTGGAGCCCCCAGAACCATGTGCCGAGCCCGCTGCTTTTGGAGACACGCTTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547789.1
ENST00000551807.1
CDS GCA 72 bp GGGCTCCACCTACGATCGGACTACAGGGGTCACGGATaGTCTTCCAAAGATCCCGTTCTCGCCCCAGGGTCT +
Preference number: 6 (lower is better)
Translates to: GLHLRSDYRGHG*SSKDPVLAPGS
Trigger: AGACCCTGGGGCGAGAACGGGATCTTTGGAAGAGCATCCGTGACCCCTGTAGTCCGATCGTAGGTGGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256680.10
CDS GCA 72 bp GGGCTCCACCTACGATCGGACTACAGGGGTCACGGATaGTCTTCCAAAGATCCCGTTCTCGCCCCTAGACCC +
Preference number: 6 (lower is better)
Translates to: GLHLRSDYRGHG*SSKDPVLAPRP
Trigger: GGGTCTAGGGGCGAGAACGGGATCTTTGGAAGAGCATCCGTGACCCCTGTAGTCCGATCGTAGGTGGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553027.1
CDS CCA 72 bp TTCCAAAGATCCCGTTCTCGCCCCAGGGTCTCCACTTaGAGGGTCCGGACGGGACTTTCGGTTTCGAGCCCA +
Preference number: 6 (lower is better)
Translates to: FQRSRSRPRVST*RVRTGLSVSSP
Trigger: TGGGCTCGAAACCGAAAGTCCCGTCCGGACCCTCCAAGTGGAGACCCTGGGGCGAGAACGGGATCTTTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256680.10
CDS CCA 72 bp GTGAAGCGTGTCTCCAAAAGCAGCGGGCTCGGCACATaGTTCTGGGGGCTCCACCTACGATCGGACTACAGG +
Preference number: 6 (lower is better)
Translates to: VKRVSKSSGLGT*FWGLHLRSDYR
Trigger: CCTGTAGTCCGATCGTAGGTGGAGCCCCCAGAACCATGTGCCGAGCCCGCTGCTTTTGGAGACACGCTTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256680.10
ENST00000549084.1
ENST00000553027.1
CDS GCA 72 bp GACCCCAGAGCCCCGAGTTTCTTCTCCCGAACCGCTTaGCACGTGTCCAAGCCAAAGCTGACGTGTTTCAGC +
Preference number: 6 (lower is better)
Translates to: DPRAPSFFSRTA*HVSKPKLTCFS
Trigger: GCTGAAACACGTCAGCTTTGGCTTGGACACGTGGCAAGCGGTTCGGGAGAAGAAACTCGGGGCTCTGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000551807.1
ENST00000553027.1
CDS GCA 72 bp TTAAGGAGTGAGGATGGCCGAGAAAGCCTCTACCCATaGAAAGGGGGTACCCAGGCCCACCCCTGCCGAGAT +
Preference number: 6 (lower is better)
Translates to: LRSEDGRESLYP*KGGTQAHPCRD
Trigger: ATCTCGGCAGGGGTGGGCCTGGGTACCCCCTTTGCATGGGTAGAGGCTTTCTCGGCCATCCTCACTCCTTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000549084.1
ENST00000551694.5
ENST00000553027.1
CDS CAA 72 bp CGACCCCAGAGCCCCGAGTTTCTTCTCCCGAACCGCTaGCCACGTGTCCAAGCCAAAGCTGACGTGTTTCAG +
Preference number: 6 (lower is better)
Translates to: RPQSPEFLLPNR*PRVQAKADVFQ
Trigger: CTGAAACACGTCAGCTTTGGCTTGGACACGTGGCAAGCGGTTCGGGAGAAGAAACTCGGGGCTCTGGGGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000551807.1
ENST00000553027.1
CDS CAA 90 bp CTCAACTCCCCCGACAAAAGCAACAGCGCAAGAGGCACAGAGGCTTaGAATGCCCTCAGAGGTCCCACTGACCTGGACCTGTCCAGTGGG +
Preference number: 6 (lower is better)
Translates to: LNSPDKSNSARGTEA*NALRGPTDLDLSSG
Trigger: CCCACTGGACAGGTCCAGGTCAGTGGGACCTCTGAGGGCATTCAAAGCCTCTGTGCCTCTTGCGCTGTTGCTTTTGTCGGGGGAGTTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000549084.1
ENST00000551694.5
ENST00000553027.1
CDS TCA 72 bp AGGCACAGAGGCTTTGAATGCCCTCAGAGGTCCCACTaGCCTGGACCTGTCCAGTGGGAAGCAGGGTCCTTT +
Preference number: 6 (lower is better)
Translates to: RHRGFECPQRSH*PGPVQWEAGSF
Trigger: AAAGGACCCTGCTTCCCACTGGACAGGTCCAGGTCAGTGGGACCTCTGAGGGCATTCAAAGCCTCTGTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000549084.1
ENST00000551694.5
ENST00000553027.1
CDS GCA 72 bp CCAGAAGGCTGGCGCTTCTCGGAGATCTCTCCACCCTaGACTTCTCCGTGCCAGGTAGGAACTGGCAGAAAA +
Preference number: 6 (lower is better)
Translates to: PEGWRFSEISPP*TSPCQVGTGRK
Trigger: TTTTCTGCCAGTTCCTACCTGGCACGGAGAAGTGCAGGGTGGAGAGATCTCCGAGAAGCGCCAGCCTTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444214.6
ENST00000553027.1
CDS GCA 72 bp TTGGCTCGGATTAGTGCAATCAGCTCCACGTCATACTaGACCACTGCATCCGCTGGAGAGGCAGAGGGGTGG +
Preference number: 6 (lower is better)
Translates to: LARISAISSTSY*TTASAGEAEGW
Trigger: CCACCCCTCTGCCTCTCCAGCGGATGCAGTGGTGCAGTATGACGTGGAGCTGATTGCACTAATCCGAGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000551694.5
ENST00000553027.1
CDS CCA 72 bp TGTCTGTTCTTCCAAGTCGTCTCCTTGTGGCTATCCTaGCAGTGTCTGGCTGGCAGACCCCACCCAGGCAGT +
Preference number: 6 (lower is better)
Translates to: CLFFQVVSLWLS*QCLAGRPHPGS
Trigger: ACTGCCTGGGTGGGGTCTGCCAGCCAGACACTGCCAGGATAGCCACAAGGAGACGACTTGGAAGAACAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553027.1
CDS CCA 72 bp TCTGGGAAAGGTGGTGGCACAGGCAGCAGACCCATGTaGCCCAAGCAGGTCTCTTCCCTAACAAGTTACTGG +
Preference number: 6 (lower is better)
Translates to: SGKGGGTGSRPM*PKQVSSLTSYW
Trigger: CCAGTAACTTGTTAGGGAAGAGACCTGCTTGGGCCACATGGGTCTGCTGCCTGTGCCACCACCTTTCCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000453172.2
ENST00000546671.5
ENST00000551694.5
ENST00000553027.1
CDS CAA 90 bp GACAGAGACAGGATTCAAACCCAGGACTGCCTGAGTCCAACGTGGTaGCTGTCTGTTCTTCCAAGTCGTCTCCTTGTGGCTATCCTGGCA +
Preference number: 6 (lower is better)
Translates to: DRDRIQTQDCLSPTW*LSVLPSRLLVAILA
Trigger: TGCCAGGATAGCCACAAGGAGACGACTTGGAAGAACAGACAGCAACCACGTTGGACTCAGGCAGTCCTGGGTTTGAATCCTGTCTCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553027.1
CDS CAA 90 bp AGGTGGAATGGGAGGCACAGGTCACATACCTGGAATCACCTGCTTTaGGCCAAGTTCTATAACCAGAGGGTCTCTGGTCAGGGAGGTGTC +
Preference number: 6 (lower is better)
Translates to: RWNGRHRSHTWNHLL*AKFYNQRVSGQGGV
Trigger: GACACCTCCCTGACCAGAGACCCTCTGGTTATAGAACTTGGCCAAAAGCAGGTGATTCCAGGTATGTGACCTGTGCCTCCCATTCCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553027.1
CDS GCA 72 bp CCAGTGGGAAGCAGGGTCCTTTATTCCACATTCTCCTaGTTAAGGAGTGAGGATGGCCGAGAAAGCCTCTAC +
Preference number: 6 (lower is better)
Translates to: PVGSRVLYSTFS*LRSEDGRESLY
Trigger: GTAGAGGCTTTCTCGGCCATCCTCACTCCTTAAGCAGGAGAATGTGGAATAAAGGACCCTGCTTCCCACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000549084.1
ENST00000551694.5
ENST00000553027.1
CDS GCA 72 bp CAGAGAGAACAGCTAGGCAACTACCAGGAGGCTCACTaGTCAATTAAGCATCCCTCCTCAGAATCAGGGCAC +
Preference number: 6 (lower is better)
Translates to: QREQLGNYQEAH*SIKHPSSESGH
Trigger: GTGCCCTGATTCTGAGGAGGGATGCTTAATTGAGCAGTGAGCCTCCTGGTAGTTGCCTAGCTGTTCTCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553027.1
CDS CAA 72 bp GGGAGGCACAGGTCACATACCTGGAATCACCTGCTTTaGGCCAAGTTCTATAACCAGAGGGTCTCTGGTCAG +
Preference number: 6 (lower is better)
Translates to: GRHRSHTWNHLL*AKFYNQRVSGQ
Trigger: CTGACCAGAGACCCTCTGGTTATAGAACTTGGCCAAAAGCAGGTGATTCCAGGTATGTGACCTGTGCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553027.1
CDS TCA 72 bp CAGGGTCCTTTATTCCACATTCTCCTGCTTAAGGAGTaGGGATGGCCGAGAAAGCCTCTACCCATGCAAAGG +
Preference number: 6 (lower is better)
Translates to: QGPLFHILLLKE*GWPRKPLPMQR
Trigger: CCTTTGCATGGGTAGAGGCTTTCTCGGCCATCCTCACTCCTTAAGCAGGAGAATGTGGAATAAAGGACCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000549084.1
ENST00000551694.5
ENST00000553027.1
CDS CCA 72 bp GGGAAGAGGTGGAATGGGAGGCACAGGTCACATACCTaGAATCACCTGCTTTTGGCCAAGTTCTATAACCAG +
Preference number: 6 (lower is better)
Translates to: GKRWNGRHRSHT*NHLLLAKFYNQ
Trigger: CTGGTTATAGAACTTGGCCAAAAGCAGGTGATTCCAGGTATGTGACCTGTGCCTCCCATTCCACCTCTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553027.1
CDS TCA 72 bp AGGTGGCCTCATCAGGTTGTCTTTAGTCCCTGTTGGTaGTATGAGGAGGAAAAAGGTGGCCCTGTAGATGGA +
Preference number: 6 (lower is better)
Translates to: RWPHQVVFSPCW*YEEEKGGPVDG
Trigger: TCCATCTACAGGGCCACCTTTTTCCTCCTCATATCACCAACAGGGACTAAAGACAACCTGATGAGGCCACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000546671.5
ENST00000551694.5
ENST00000553027.1
CDS GCA 72 bp TCCCCGTTTTCCATAGGCCAAGTGAGAAGGAATGATTaGCCTTCGCTTCTCTCTGAGGGAAGGAATGTCAGT +
Preference number: 6 (lower is better)
Translates to: SPFSIGQVRRND*PSLLSEGRNVS
Trigger: ACTGACATTCCTTCCCTCAGAGAGAAGCGAAGGGCAATCATTCCTTCTCACTTGGCCTATGGAAAACGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000546847.5
ENST00000551694.5
ENST00000553027.1
CDS CCA 72 bp CTGAGAGAGAGTCCTAGTCAGATTACCTGGGACAGATaGTGGAAATCCCCGTTTTCCATAGGCCAAGTGAGA +
Preference number: 6 (lower is better)
Translates to: LRESPSQITWDR*WKSPFSIGQVR
Trigger: TCTCACTTGGCCTATGGAAAACGGGGATTTCCACCATCTGTCCCAGGTAATCTGACTAGGACTCTCTCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000546671.5
ENST00000551694.5
ENST00000553027.1
CDS TCA 72 bp CTGAATCTTCACACCCAAAACACGAATTTTTCCACCTaGACACCAAACAGGCTGGCCAGCAAAGGTGTCCAT +
Preference number: 6 (lower is better)
Translates to: LNLHTQNTNFST*TPNRLASKGVH
Trigger: ATGGACACCTTTGCTGGCCAGCCTGTTTGGTGTTCAGGTGGAAAAATTCGTGTTTTGGGTGTGAAGATTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000549084.1
ENST00000551694.5
ENST00000553027.1
CDS TCA 72 bp GTTAGACTCTCTGCATTTTATCCAGGGCTCAGAATCTaGATGAAAATAGGGAGCGTAGGCCACAGCAAAGCC +
Preference number: 6 (lower is better)
Translates to: VRLSAFYPGLRI*MKIGSVGHSKA
Trigger: GGCTTTGCTGTGGCCTACGCTCCCTATTTTCATTCAGATTCTGAGCCCTGGATAAAATGCAGAGAGTCTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000551694.5
ENST00000553027.1
CDS TCA 72 bp GTTCTCATTCCTCTCCGACCTCCAGCTACTTCAGCTTaGATTTCTGGAGGTTATAGATCCAAGTATCCGAAA +
Preference number: 6 (lower is better)
Translates to: VLIPLRPPATSA*ISGGYRSKYPK
Trigger: TTTCGGATACTTGGATCTATAACCTCCAGAAATTCAAGCTGAAGTAGCTGGAGGTCGGAGAGGAATGAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553027.1
CDS CCA 72 bp GGAGGCCCCAGCCACTCCTATCTGTCTAAACAAACTTaGTCTGGATCTTCTCAAGCATCAAACAAAGTATAT +
Preference number: 6 (lower is better)
Translates to: GGPSHSYLSKQT*SGSSQASNKVY
Trigger: ATATACTTTGTTTGATGCTTGAGAAGATCCAGACCAAGTTTGTTTAGACAGATAGGAGTGGCTGGGGCCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546671.5
ENST00000551694.5
ENST00000553027.1
CDS TCA 72 bp AAGGAGCTGTTATCCTGTAAGAACAGGGTAAATCCCTaGTCTTTTCCTCTGGTGCTACTATTTCCTTTCTCC +
Preference number: 6 (lower is better)
Translates to: KELLSCKNRVNP*SFPLVLLFPFS
Trigger: GGAGAAAGGAAATAGTAGCACCAGAGGAAAAGATCAGGGATTTACCCTGTTCTTACAGGATAACAGCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553027.1
CDS CAA 90 bp AAATCCCATGACATGAAGATCAAAGTCTTCCTCCTCCATCCTCAATaGACCTTTCCCTCACTTCTTAAATCTCTGGCTTCCAATAGGATA +
Preference number: 6 (lower is better)
Translates to: KSHDMKIKVFLLHPQ*TFPSLLKSLASNRI
Trigger: TATCCTATTGGAAGCCAGAGATTTAAGAAGTGAGGGAAAGGTCAATTGAGGATGGAGGAGGAAGACTTTGATCTTCATGTCATGGGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553027.1