RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FITM2 (Homo sapiens)

Ensembl gene IDs: ENSG00000197296

Ensembl transcript IDs: ENST00000396825.4

Found 216 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTTCAACAAGCCCCTGCCATCTACTCCATGGCCACTCCCACCACTaGTTTATGGGCATAGGCAACAGAGGGTCACATCTTACCAACGCC +
Preference number: 1 (lower is better)
Translates to: PSTSPCHLLHGHSHH*FMGIGNRGSHLTNA
Trigger: GGCGTTGGTAAGATGTGACCCTCTGTTGCCTATGCCCATAAACCAGTGGTGGGAGTGGCCATGGAGTAGATGGCAGGGGCTTGTTGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR CCA 90 bp AGGAGAGCTTTCAATCCCTTCAACAAGCCCCTGCCATCTACTCCATaGCCACTCCCACCACTGGTTTATGGGCATAGGCAACAGAGGGTC +
Preference number: 1 (lower is better)
Translates to: RRAFNPFNKPLPSTP*PLPPLVYGHRQQRV
Trigger: GACCCTCTGTTGCCTATGCCCATAAACCAGTGGTGGGAGTGGCCATGGAGTAGATGGCAGGGGCTTGTTGAAGGGATTGAAAGCTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR GCA 90 bp GGCAACAGAGGGTCACATCTTACCAACGCCTCCAAAGCACCATGGTaGCACCTCCCATATCTCATCACCTGTGTTTCTGCTCCTTTTGGG +
Preference number: 1 (lower is better)
Translates to: GNRGSHLTNASKAPW*HLPYLITCVSAPFG
Trigger: CCCAAAAGGAGCAGAAACACAGGTGATGAGATATGGGAGGTGGCACCATGGTGCTTTGGAGGCGTTGGTAAGATGTGACCCTCTGTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR GCA 90 bp ACCATGCCTAGCCTAGGAGAGCTTTCAATCCCTTCAACAAGCCCCTaGCATCTACTCCATGGCCACTCCCACCACTGGTTTATGGGCATA +
Preference number: 1 (lower is better)
Translates to: TMPSLGELSIPSTSP*HLLHGHSHHWFMGI
Trigger: TATGCCCATAAACCAGTGGTGGGAGTGGCCATGGAGTAGATGGCAGGGGCTTGTTGAAGGGATTGAAAGCTCTCCTAGGCTAGGCATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR TCA 90 bp GGAATGGTGGTGCTTGCAACACTGGTGATGTCGCCAAGAATAGTCTaGAGACTAAACTCACTCCCCAGACTTCAGCACCACCCACCAAAA +
Preference number: 1 (lower is better)
Translates to: GMVVLATLVMSPRIV*RLNSLPRLQHHPPK
Trigger: TTTTGGTGGGTGGTGCTGAAGTCTGGGGAGTGAGTTTAGTCTTCAGACTATTCTTGGCGACATCACCAGTGTTGCAAGCACCACCATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR CCA 90 bp ATAGGCAACAGAGGGTCACATCTTACCAACGCCTCCAAAGCACCATaGTGCCACCTCCCATATCTCATCACCTGTGTTTCTGCTCCTTTT +
Preference number: 1 (lower is better)
Translates to: IGNRGSHLTNASKAP*CHLPYLITCVSAPF
Trigger: AAAAGGAGCAGAAACACAGGTGATGAGATATGGGAGGTGGCACCATGGTGCTTTGGAGGCGTTGGTAAGATGTGACCCTCTGTTGCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR GCA 90 bp AGTTTGGTTGGTGATGCAAGTAACAGGAGGGAGGGACCACAGCCATaGCACCCTTCAATAAGGGTGATTTTGCAAACAGGTTGGCTTTTT +
Preference number: 1 (lower is better)
Translates to: SLVGDASNRREGPQP*HPSIRVILQTGWLF
Trigger: AAAAAGCCAACCTGTTTGCAAAATCACCCTTATTGAAGGGTGGCATGGCTGTGGTCCCTCCCTCCTGTTACTTGCATCACCAACCAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR GCA 90 bp AGTCTTACCAGGGACAAAAAGTGCCTAACTGGGAATGGTGGTGCTTaGAACACTGGTGATGTCGCCAAGAATAGTCTGAAGACTAAACTC +
Preference number: 1 (lower is better)
Translates to: SLTRDKKCLTGNGGA*NTGDVAKNSLKTKL
Trigger: GAGTTTAGTCTTCAGACTATTCTTGGCGACATCACCAGTGTTGCAAGCACCACCATTCCCAGTTAGGCACTTTTTGTCCCTGGTAAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR CCA 90 bp GCACATGACCCTGAAGCACACTGTTCAGTCTATACCACTGATATGTaGTCAGGGACATTTCGGTGCAAGAACGCATTCTGCAAAATTACC +
Preference number: 1 (lower is better)
Translates to: AHDPEAHCSVYTTDM*SGTFRCKNAFCKIT
Trigger: GGTAATTTTGCAGAATGCGTTCTTGCACCGAAATGTCCCTGACCACATATCAGTGGTATAGACTGAACAGTGTGCTTCAGGGTCATGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR TCA 90 bp TCAGACCCACGTGGGATAAATATCTGGAGATTTAAGTGTCACAAATaGACTTCTGGGGTCACCCTGTGCCTATTCCCTTTTGGTGCTGAA +
Preference number: 1 (lower is better)
Translates to: SDPRGINIWRFKCHK*TSGVTLCLFPFGAE
Trigger: TTCAGCACCAAAAGGGAATAGGCACAGGGTGACCCCAGAAGTTCATTTGTGACACTTAAATCTCCAGATATTTATCCCACGTGGGTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR CCA 90 bp AGAAAAAGGAAACTGATTTCAAGTCCAGCTGAACAGGCCCAGGTATaGTTTGGTTTAGTTTGGTTGGTGATGCAAGTAACAGGAGGGAGG +
Preference number: 1 (lower is better)
Translates to: RKRKLISSPAEQAQV*FGLVWLVMQVTGGR
Trigger: CCTCCCTCCTGTTACTTGCATCACCAACCAAACTAAACCAAACCATACCTGGGCCTGTTCAGCTGGACTTGAAATCAGTTTCCTTTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR CCA 90 bp CTGTGTGTACATAACAGTGGCAAGAGCCATTCTCTAAATACAATCTaGTACCCAGACTATGACAGATGCACGTGGAAAATGAGGCGTCAG +
Preference number: 1 (lower is better)
Translates to: LCVHNSGKSHSLNTI*YPDYDRCTWKMRRQ
Trigger: CTGACGCCTCATTTTCCACGTGCATCTGTCATAGTCTGGGTACCAGATTGTATTTAGAGAATGGCTCTTGCCACTGTTATGTACACACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR GCA 90 bp ACCACTGATATGTGGTCAGGGACATTTCGGTGCAAGAACGCATTCTaGAAAATTACCTTGATTCACCTTAAAATTCAACAGGCTGTTACT +
Preference number: 1 (lower is better)
Translates to: TTDMWSGTFRCKNAF*KITLIHLKIQQAVT
Trigger: AGTAACAGCCTGTTGAATTTTAAGGTGAATCAAGGTAATTTTGCAGAATGCGTTCTTGCACCGAAATGTCCCTGACCACATATCAGTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR GCA 90 bp CACTGTTCAGTCTATACCACTGATATGTGGTCAGGGACATTTCGGTaGAAGAACGCATTCTGCAAAATTACCTTGATTCACCTTAAAATT +
Preference number: 1 (lower is better)
Translates to: HCSVYTTDMWSGTFR*KNAFCKITLIHLKI
Trigger: AATTTTAAGGTGAATCAAGGTAATTTTGCAGAATGCGTTCTTGCACCGAAATGTCCCTGACCACATATCAGTGGTATAGACTGAACAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR CCA 90 bp TTTTGGTGGCTAATCGCAAGTCAGTTGCAATATTTAAACACTTCATaGATGAAACAAATATTACAACCAGAGAGTGTCCTTCAGGCATCA +
Preference number: 1 (lower is better)
Translates to: FWWLIASQLQYLNTS*MKQILQPESVLQAS
Trigger: TGATGCCTGAAGGACACTCTCTGGTTGTAATATTTGTTTCATCCATGAAGTGTTTAAATATTGCAACTGACTTGCGATTAGCCACCAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR TCA 90 bp CCTGTGTTTCTGCTCCTTTTGGGTGCAACAAATCATGACTCATTGTaGTGGATAAAATTAACCTCCAACTTGATGGGATATGAAATATTT +
Preference number: 1 (lower is better)
Translates to: PVFLLLLGATNHDSL*WIKLTSNLMGYEIF
Trigger: AAATATTTCATATCCCATCAAGTTGGAGGTTAATTTTATCCATCACAATGAGTCATGATTTGTTGCACCCAAAAGGAGCAGAAACACAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR GCA 90 bp CCAACGCCTCCAAAGCACCATGGTGCCACCTCCCATATCTCATCACCTGTGTTTCTGGGAGGTGGAGGTTaGGGTGAGCCGAGATCGGGC +
Preference number: 2 (lower is better)
Translates to: PTPPKHHGATSHISSPVFLGGGG*GEPRSG
Trigger: GCCCGATCTCGGCTCACCGCAACCTCCACCTCCCAG...AAACACAGGTGATGAGATATGGGAGGTGGCACCATGGTGCTTTGGAGGCGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR GCA 90 bp TACTTGGTCGGAGAGGCACTGCATCTAAAAGGGCCTGTTTTGGTGGCTAATCGCCCGAGATCGGGCCATTaGACCCCAGCCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: YLVGEALHLKGPVLVANRPRSGH*TPAWAT
Trigger: TGTTGCCCAGGCTGGGGTGCAATGGCCCGATCTCGG...GCGATTAGCCACCAAAACAGGCCCTTTTAGATGCAGTGCCTCTCCGACCAAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR CAA 90 bp TCAAGTCCAGCTGAACAGGCCCAGGTATGGTTTGGTTTAGTTTGGTaGGTGATGCAAGTAACAGGAGGGAGGGACCACAGCCATGCCACC +
Preference number: 2 (lower is better)
Translates to: SSPAEQAQVWFGLVW*VMQVTGGRDHSHAT
Trigger: GGTGGCATGGCTGTGGTCCCTCCCTCCTGTTACTTGCATCACCAACCAAACTAAACCAAACCATACCTGGGCCTGTTCAGCTGGACTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR GCA 90 bp TACCAACGCCTCCAAAGCACCATGGTGCCACCTCCCATATCTCATCACCTGTGTCAGCAGAGTGATCAGTaGACTCAGCACATGACCCTG +
Preference number: 2 (lower is better)
Translates to: YQRLQSTMVPPPISHHLCQQSDQ*TQHMTL
Trigger: CAGGGTCATGTGCTGAGTGCACTGATCACTCTGCTG...ACACAGGTGATGAGATATGGGAGGTGGCACCATGGTGCTTTGGAGGCGTTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR TCA 90 bp GATCATAGTCCATTACGTATGAATCATCCAATACTTGGTCGGAGAGGCACTGCAATAAAGAACCCTGCCTaGGCCGGGCGCGGTGGCTCA +
Preference number: 2 (lower is better)
Translates to: DHSPLRMNHPILGRRGTAIKNPA*AGRGGS
Trigger: TGAGCCACCGCGCCCGGCTCAGGCAGGGTTCTTTAT...TGCAGTGCCTCTCCGACCAAGTATTGGATGATTCATACGTAATGGACTATGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR TCA 90 bp ATGGCAGTATTCTATGATCACAGATGCCCCCAGAGCCTGGGGGTAACCGACACTGATTTCAAGTCCAGCTaGACAGGCCCAGGTATGGTT +
Preference number: 2 (lower is better)
Translates to: MAVFYDHRCPQSLGVTDTDFKSS*TGPGMV
Trigger: AACCATACCTGGGCCTGTTCAGCTGGACTTGAAATC...AGTGTCGGTTACCCCCAGGCTCTGGGGGCATCTGTGATCATAGAATACTGCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR GCA 90 bp TACCAACGCCTCCAAAGCACCATGGTGCCACCTCCCATATCTCATCACCTGTGTAAAACAACCTACATGTaGCAGAGTGCAGCACTGGCC +
Preference number: 2 (lower is better)
Translates to: YQRLQSTMVPPPISHHLCKTTYM*QSAALA
Trigger: GGCCAGTGCTGCACTCTGGCACATGTAGGTTGTTTT...ACACAGGTGATGAGATATGGGAGGTGGCACCATGGTGCTTTGGAGGCGTTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR CCA 90 bp CCATGGCCACTCCCACCACTGGTTTATGGGCATAGGCAACAGAGGGTCACATCTCTTAAGGAGACAGTCTaGGAGAGAAGAGGGGATATC +
Preference number: 2 (lower is better)
Translates to: PWPLPPLVYGHRQQRVTSLKETV*ERRGDI
Trigger: GATATCCCCTCTTCTCTCCCAGACTGTCTCCTTAAG...AGATGTGACCCTCTGTTGCCTATGCCCATAAACCAGTGGTGGGAGTGGCCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR CCA 90 bp GAACTTCTGGGGTCACCCTGTGCCTATTCCCTTTTGGTGCTGAACATGACACTTCTGCCATCTACTCCATaGCCACTCCCACCACTGGTT +
Preference number: 2 (lower is better)
Translates to: ELLGSPCAYSLLVLNMTLLPSTP*PLPPLV
Trigger: AACCAGTGGTGGGAGTGGCCATGGAGTAGATGGCAG...AAGTGTCATGTTCAGCACCAAAAGGGAATAGGCACAGGGTGACCCCAGAAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR CCA 90 bp ATGGCAGTATTCTATGATCACAGATGCCCCCAGAGCCTGGGGGTAACCGACACTCTAAGCATGGACAAGTaGCGGAAGCCTCATCGATAC +
Preference number: 2 (lower is better)
Translates to: MAVFYDHRCPQSLGVTDTLSMDK*RKPHRY
Trigger: GTATCGATGAGGCTTCCGCCACTTGTCCATGCTTAG...AGTGTCGGTTACCCCCAGGCTCTGGGGGCATCTGTGATCATAGAATACTGCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR TCA 90 bp GAACTTCTGGGGTCACCCTGTGCCTATTCCCTTTTGGTGCTGAACATGACACTTATTCTGCCCTTTTGCTaGGCCTTAGGTCCCCACTCT +
Preference number: 2 (lower is better)
Translates to: ELLGSPCAYSLLVLNMTLILPFC*ALGPHS
Trigger: AGAGTGGGGACCTAAGGCTCAGCAAAAGGGCAGAAT...AAGTGTCATGTTCAGCACCAAAAGGGAATAGGCACAGGGTGACCCCAGAAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR TCA 90 bp TACCAACGCCTCCAAAGCACCATGGTGCCACCTCCCATATCTCATCACCTGTGTGACAAAGCTGGAAACTaGAAAGTGCTGCAAAGGGGA +
Preference number: 2 (lower is better)
Translates to: YQRLQSTMVPPPISHHLCDKAGN*KVLQRG
Trigger: TCCCCTTTGCAGCACTTTTCAGTTTCCAGCTTTGTC...ACACAGGTGATGAGATATGGGAGGTGGCACCATGGTGCTTTGGAGGCGTTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR TCA 90 bp CCAACGCCTCCAAAGCACCATGGTGCCACCTCCCATATCTCATCACCTGTGTTTTGCTACTATTGGACTTaGTTGGAGAGAGGGGCATCA +
Preference number: 2 (lower is better)
Translates to: PTPPKHHGATSHISSPVFCYYWT*LERGAS
Trigger: TGATGCCCCTCTCTCCAATCAAGTCCAATAGTAGCA...AAACACAGGTGATGAGATATGGGAGGTGGCACCATGGTGCTTTGGAGGCGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR GCA 90 bp AAGAGGGGATATCTTATCACAGGGCGTGGAACTGTGCCTTTGTGGATGGAGGTGACCACCCACCAAAACTaGCTGGTACACTTTCCCTCT +
Preference number: 2 (lower is better)
Translates to: KRGYLITGRGTVPLWMEVTTHQN*LVHFPS
Trigger: AGAGGGAAAGTGTACCAGGCAGTTTTGGTGGGTGGT...CACCTCCATCCACAAAGGCACAGTTCCACGCCCTGTGATAAGATATCCCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR CCA 90 bp CCATGGCCACTCCCACCACTGGTTTATGGGCATAGGCAACAGAGGGTCACATCTCAAAAAGTGCCTAACTaGGAATGGTGGTGCTTGCAA +
Preference number: 2 (lower is better)
Translates to: PWPLPPLVYGHRQQRVTSQKVPN*EWWCLQ
Trigger: TTGCAAGCACCACCATTCCCAGTTAGGCACTTTTTG...AGATGTGACCCTCTGTTGCCTATGCCCATAAACCAGTGGTGGGAGTGGCCATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR CCA 90 bp CCATGGCCACTCCCACCACTGGTTTATGGGCATAGGCAACAGAGGGTCACATCTAAATCTAAAGACAACTaGAACCAGGGAGAAGGCAGC +
Preference number: 2 (lower is better)
Translates to: PWPLPPLVYGHRQQRVTSKSKDN*NQGEGS
Trigger: GCTGCCTTCTCCCTGGTTCCAGTTGTCTTTAGATTT...AGATGTGACCCTCTGTTGCCTATGCCCATAAACCAGTGGTGGGAGTGGCCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR CCA 90 bp TACCAACGCCTCCAAAGCACCATGGTGCCACCTCCCATATCTCATCACCTGTGTAAGGGCCTGTTTTGGTaGCTAATCGCAAGTCAGTTG +
Preference number: 2 (lower is better)
Translates to: YQRLQSTMVPPPISHHLCKGLFW*LIASQL
Trigger: CAACTGACTTGCGATTAGCCACCAAAACAGGCCCTT...ACACAGGTGATGAGATATGGGAGGTGGCACCATGGTGCTTTGGAGGCGTTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR CAA 90 bp AGGAGGGAGGGACCACAGCCATGCCACCCTTCAATAAGGGTGATTTaGCAAACAGGTTGGCTTTTTGCCATCAGAGGGAGGCATTTTACT +
Preference number: 2 (lower is better)
Translates to: RREGPQPCHPSIRVI*QTGWLFAIRGRHFT
Trigger: AGTAAAATGCCTCCCTCTGATGGCAAAAAGCCAACCTGTTTGCAAAATCACCCTTATTGAAGGGTGGCATGGCTGTGGTCCCTCCCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR TCA 90 bp AAGAGGGGATATCTTATCACAGGGCGTGGAACTGTGCCTTTGTGGATGGAGGTGTCGCCAAGAATAGTCTaGAGACTAAACTCACTCCCC +
Preference number: 2 (lower is better)
Translates to: KRGYLITGRGTVPLWMEVSPRIV*RLNSLP
Trigger: GGGGAGTGAGTTTAGTCTTCAGACTATTCTTGGCGA...CACCTCCATCCACAAAGGCACAGTTCCACGCCCTGTGATAAGATATCCCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR TCA 90 bp CCAACGCCTCCAAAGCACCATGGTGCCACCTCCCATATCTCATCACCTGTGTTTGCAGCACTGGCCTTGTaGGTTATTTTCAGGAGTTTT +
Preference number: 2 (lower is better)
Translates to: PTPPKHHGATSHISSPVFAALAL*VIFRSF
Trigger: AAAACTCCTGAAAATAACTCACAAGGCCAGTGCTGC...AAACACAGGTGATGAGATATGGGAGGTGGCACCATGGTGCTTTGGAGGCGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR CCA 90 bp TACCAACGCCTCCAAAGCACCATGGTGCCACCTCCCATATCTCATCACCTGTGTAATACAAAATTAGCCTaGTGTGGTGACGCATGCCTG +
Preference number: 2 (lower is better)
Translates to: YQRLQSTMVPPPISHHLCNTKLA*CGDACL
Trigger: CAGGCATGCGTCACCACACCAGGCTAATTTTGTATT...ACACAGGTGATGAGATATGGGAGGTGGCACCATGGTGCTTTGGAGGCGTTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR CCA 90 bp CCAACGCCTCCAAAGCACCATGGTGCCACCTCCCATATCTCATCACCTGTGTTTGGCCCAGGTATGGTTTaGTTTAGTTTGGTTGGTGAT +
Preference number: 2 (lower is better)
Translates to: PTPPKHHGATSHISSPVFGPGMV*FSLVGD
Trigger: ATCACCAACCAAACTAAACCAAACCATACCTGGGCC...AAACACAGGTGATGAGATATGGGAGGTGGCACCATGGTGCTTTGGAGGCGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR CAA 90 bp AAGCCAGTCAGGTGTAGTGCTTCTCAGTTAATGCTACTATTGGACTaGATTGGAGAGAGGGGCATCAAGGCGGCCTTAAGGGTGATTACC +
Preference number: 2 (lower is better)
Translates to: KPVRCSASQLMLLLD*IGERGIKAALRVIT
Trigger: GGTAATCACCCTTAAGGCCGCCTTGATGCCCCTCTCTCCAATCAAGTCCAATAGTAGCATTAACTGAGAAGCACTACACCTGACTGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR GCA 90 bp GCCAGAGTGCAGCACTGGCCTTGTGAGTTATTTTCAGGAGTTTTATCAACAAAGGGGAATGGTGGTGCTTaGAACACTGGTGATGTCGCC +
Preference number: 2 (lower is better)
Translates to: ARVQHWPCELFSGVLSTKGNGGA*NTGDVA
Trigger: GGCGACATCACCAGTGTTGCAAGCACCACCATTCCC...CTTTGTTGATAAAACTCCTGAAAATAACTCACAAGGCCAGTGCTGCACTCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR CCA 90 bp GAACTTCTGGGGTCACCCTGTGCCTATTCCCTTTTGGTGCTGAACATGACACTTGAATCATCCAATACTTaGTCGGAGAGGCACTGCATC +
Preference number: 2 (lower is better)
Translates to: ELLGSPCAYSLLVLNMTLESSNT*SERHCI
Trigger: GATGCAGTGCCTCTCCGACCAAGTATTGGATGATTC...AAGTGTCATGTTCAGCACCAAAAGGGAATAGGCACAGGGTGACCCCAGAAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR CCA 90 bp GAACTTCTGGGGTCACCCTGTGCCTATTCCCTTTTGGTGCTGAACATGACACTTGCCAGAGTGCAGCACTaGCCTTGTGAGTTATTTTCA +
Preference number: 2 (lower is better)
Translates to: ELLGSPCAYSLLVLNMTLARVQH*PCELFS
Trigger: TGAAAATAACTCACAAGGCCAGTGCTGCACTCTGGC...AAGTGTCATGTTCAGCACCAAAAGGGAATAGGCACAGGGTGACCCCAGAAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR CCA 90 bp AAGAGGGGATATCTTATCACAGGGCGTGGAACTGTGCCTTTGTGGATGGAGGTGTATACCACTGATATGTaGTCAGGGACATTTCGGTGC +
Preference number: 2 (lower is better)
Translates to: KRGYLITGRGTVPLWMEVYTTDM*SGTFRC
Trigger: GCACCGAAATGTCCCTGACCACATATCAGTGGTATA...CACCTCCATCCACAAAGGCACAGTTCCACGCCCTGTGATAAGATATCCCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR CCA 90 bp TACCAACGCCTCCAAAGCACCATGGTGCCACCTCCCATATCTCATCACCTGTGTATTTTGCAAACAGGTTaGCTTTTTGCCATCAGAGGG +
Preference number: 2 (lower is better)
Translates to: YQRLQSTMVPPPISHHLCILQTG*LFAIRG
Trigger: CCCTCTGATGGCAAAAAGCCAACCTGTTTGCAAAAT...ACACAGGTGATGAGATATGGGAGGTGGCACCATGGTGCTTTGGAGGCGTTGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR TCA 90 bp CCATGGCCACTCCCACCACTGGTTTATGGGCATAGGCAACAGAGGGTCACATCTATAGTCCATTACGTATaGATCATCCAATACTTGGTC +
Preference number: 2 (lower is better)
Translates to: PWPLPPLVYGHRQQRVTSIVHYV*IIQYLV
Trigger: GACCAAGTATTGGATGATTCATACGTAATGGACTAT...AGATGTGACCCTCTGTTGCCTATGCCCATAAACCAGTGGTGGGAGTGGCCATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR GCA 90 bp AGGAAACTGATTTCAAGTCCAGCTGAACAGGCCCAGGTATGGTTTGGTTTAGTTCTACATGTGCCAGAGTaGAGCACTGGCCTTGTGAGT +
Preference number: 2 (lower is better)
Translates to: RKLISSPAEQAQVWFGLVLHVPE*STGLVS
Trigger: ACTCACAAGGCCAGTGCTGCACTCTGGCACATGTAG...AACTAAACCAAACCATACCTGGGCCTGTTCAGCTGGACTTGAAATCAGTTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR GCA 90 bp GAACTTCTGGGGTCACCCTGTGCCTATTCCCTTTTGGTGCTGAACATGACACTTCATCACCTGTGTTTCTaGTCCTTTTGGGTGCAACAA +
Preference number: 2 (lower is better)
Translates to: ELLGSPCAYSLLVLNMTLHHLCF*SFWVQQ
Trigger: TTGTTGCACCCAAAAGGAGCAGAAACACAGGTGATG...AAGTGTCATGTTCAGCACCAAAAGGGAATAGGCACAGGGTGACCCCAGAAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR CCA 90 bp GCCAGAGTGCAGCACTGGCCTTGTGAGTTATTTTCAGGAGTTTTATCAACAAAGGTGCCTAACTGGGAATaGTGGTGCTTGCAACACTGG +
Preference number: 2 (lower is better)
Translates to: ARVQHWPCELFSGVLSTKVPNWE*WCLQHW
Trigger: CCAGTGTTGCAAGCACCACCATTCCCAGTTAGGCAC...CTTTGTTGATAAAACTCCTGAAAATAACTCACAAGGCCAGTGCTGCACTCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR CCA 90 bp TACTTGGTCGGAGAGGCACTGCATCTAAAAGGGCCTGTTTTGGTGGCTAATCGCACCACCATGCCTGGCTaGAAAATACTGTTAAGTAAC +
Preference number: 2 (lower is better)
Translates to: YLVGEALHLKGPVLVANRTTMPG*KILLSN
Trigger: GTTACTTAACAGTATTTTCCAGCCAGGCATGGTGGT...GCGATTAGCCACCAAAACAGGCCCTTTTAGATGCAGTGCCTCTCCGACCAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR CCA 90 bp GAACTTCTGGGGTCACCCTGTGCCTATTCCCTTTTGGTGCTGAACATGACACTTGAACAGGCCCAGGTATaGTTTGGTTTAGTTTGGTTG +
Preference number: 2 (lower is better)
Translates to: ELLGSPCAYSLLVLNMTLEQAQV*FGLVWL
Trigger: CAACCAAACTAAACCAAACCATACCTGGGCCTGTTC...AAGTGTCATGTTCAGCACCAAAAGGGAATAGGCACAGGGTGACCCCAGAAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR CCA 90 bp ATGGCAGTATTCTATGATCACAGATGCCCCCAGAGCCTGGGGGTAACCGACACTTGGTTTGGTTTAGTTTaGTTGGTGATGCAAGTAACA +
Preference number: 2 (lower is better)
Translates to: MAVFYDHRCPQSLGVTDTWFGLV*LVMQVT
Trigger: TGTTACTTGCATCACCAACCAAACTAAACCAAACCA...AGTGTCGGTTACCCCCAGGCTCTGGGGGCATCTGTGATCATAGAATACTGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR GCA 90 bp GCCAGAGTGCAGCACTGGCCTTGTGAGTTATTTTCAGGAGTTTTATCAACAAAGACCAGGGACAAAAAGTaGCTAACTGGGAATGGTGGT +
Preference number: 2 (lower is better)
Translates to: ARVQHWPCELFSGVLSTKTRDKK*LTGNGG
Trigger: ACCACCATTCCCAGTTAGGCACTTTTTGTCCCTGGT...CTTTGTTGATAAAACTCCTGAAAATAACTCACAAGGCCAGTGCTGCACTCTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR GCA 90 bp GATCATAGTCCATTACGTATGAATCATCCAATACTTGGTCGGAGAGGCACTGCAAGGTGTGAACCACCATaGCTGGCTGGAAAATACTGT +
Preference number: 2 (lower is better)
Translates to: DHSPLRMNHPILGRRGTARCEPP*LAGKYC
Trigger: ACAGTATTTTCCAGCCAGGCATGGTGGTTCACACCT...TGCAGTGCCTCTCCGACCAAGTATTGGATGATTCATACGTAATGGACTATGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR CAA 90 bp CTATCAGGAGTGGTGCCAAGATATGAACCCACATCTCATGTTTGCTaGAGCCCAAATCCTTTCACTTATGTCAGGCTGTTTCACATAGGA +
Preference number: 2 (lower is better)
Translates to: LSGVVPRYEPTSHVC*SPNPFTYVRLFHIG
Trigger: TCCTATGTGAAACAGCCTGACATAAGTGAAAGGATTTGGGCTCAAGCAAACATGAGATGTGGGTTCATATCTTGGCACCACTCCTGATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR TCA 90 bp GAACTTCTGGGGTCACCCTGTGCCTATTCCCTTTTGGTGCTGAACATGACACTTGGTACACTTTCCCTCTaGAGTAGGATCAATAATTTA +
Preference number: 2 (lower is better)
Translates to: ELLGSPCAYSLLVLNMTLGTLSL*SRINNL
Trigger: TAAATTATTGATCCTACTTCAGAGGGAAAGTGTACC...AAGTGTCATGTTCAGCACCAAAAGGGAATAGGCACAGGGTGACCCCAGAAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR TCA 90 bp GCTGAACAGGCCCAGGTATGGTTTGGTTTAGTTTGGTTGGTGATGCAAGTAACAATGCCTATGCAAAACTaGCCAGTGGGAAATACTGTT +
Preference number: 2 (lower is better)
Translates to: AEQAQVWFGLVWLVMQVTMPMQN*PVGNTV
Trigger: AACAGTATTTCCCACTGGTCAGTTTTGCATAGGCAT...TGTTACTTGCATCACCAACCAAACTAAACCAAACCATACCTGGGCCTGTTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR GCA 90 bp GAACTTCTGGGGTCACCCTGTGCCTATTCCCTTTTGGTGCTGAACATGACACTTTGCAAGAACGCATTCTaGAAAATTACCTTGATTCAC +
Preference number: 2 (lower is better)
Translates to: ELLGSPCAYSLLVLNMTLCKNAF*KITLIH
Trigger: GTGAATCAAGGTAATTTTGCAGAATGCGTTCTTGCA...AAGTGTCATGTTCAGCACCAAAAGGGAATAGGCACAGGGTGACCCCAGAAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR CCA 90 bp GATCATAGTCCATTACGTATGAATCATCCAATACTTGGTCGGAGAGGCACTGCAGTGAACCACCATGCCTaGCTGGAAAATACTGTTAAG +
Preference number: 2 (lower is better)
Translates to: DHSPLRMNHPILGRRGTAVNHHA*LENTVK
Trigger: CTTAACAGTATTTTCCAGCCAGGCATGGTGGTTCAC...TGCAGTGCCTCTCCGACCAAGTATTGGATGATTCATACGTAATGGACTATGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR CAA 90 bp ATCCAATACTTGGTCGGAGAGGCACTGCATCTAAAAGGGCCTGTTTaGGTGGCTAATCGCAAGTCAGTTGCAATATTTAAACACTTCATG +
Preference number: 2 (lower is better)
Translates to: IQYLVGEALHLKGPV*VANRKSVAIFKHFM
Trigger: CATGAAGTGTTTAAATATTGCAACTGACTTGCGATTAGCCACCAAAACAGGCCCTTTTAGATGCAGTGCCTCTCCGACCAAGTATTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR GCA 90 bp GCTGAACAGGCCCAGGTATGGTTTGGTTTAGTTTGGTTGGTGATGCAAGTAACAAGGCTGTTACTAAAATaGCTGCTTTCTGGTTTGATT +
Preference number: 2 (lower is better)
Translates to: AEQAQVWFGLVWLVMQVTRLLLK*LLSGLI
Trigger: AATCAAACCAGAAAGCAGGCATTTTAGTAACAGCCT...TGTTACTTGCATCACCAACCAAACTAAACCAAACCATACCTGGGCCTGTTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR CAA 90 bp CAGGCCCAGGTATGGTTTGGTTTAGTTTGGTTGGTGATGCAAGTAACAGGAGGGGCCGAGATCGGGCCATaGCACCCCAGCCTGGGCAAC +
Preference number: 3 (lower is better)
Translates to: QAQVWFGLVWLVMQVTGGAEIGP*HPSLGN
Trigger: GTTGCCCAGGCTGGGGTGCAATGGCCCGATCTCGGC...CCCTCCTGTTACTTGCATCACCAACCAAACTAAACCAAACCATACCTGGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR GCA 72 bp AGGTACAGATGCCCTGGGCCACAGCAGAGTGATCAGTaGACTCAGCACATGACCCTGAAGCACACTGTTCAG +
Preference number: 3 (lower is better)
Translates to: RYRCPGPQQSDQ*TQHMTLKHTVQ
Trigger: CTGAACAGTGTGCTTCAGGGTCATGTGCTGAGTGCACTGATCACTCTGCTGTGGCCCAGGGCATCTGTACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR GCA 72 bp AGCCTAGGAGAGCTTTCAATCCCTTCAACAAGCCCCTaGCATCTACTCCATGGCCACTCCCACCACTGGTTT +
Preference number: 3 (lower is better)
Translates to: SLGELSIPSTSP*HLLHGHSHHWF
Trigger: AAACCAGTGGTGGGAGTGGCCATGGAGTAGATGGCAGGGGCTTGTTGAAGGGATTGAAAGCTCTCCTAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR GCA 72 bp GGGTCACATCTTACCAACGCCTCCAAAGCACCATGGTaGCACCTCCCATATCTCATCACCTGTGTTTCTGCT +
Preference number: 3 (lower is better)
Translates to: GSHLTNASKAPW*HLPYLITCVSA
Trigger: AGCAGAAACACAGGTGATGAGATATGGGAGGTGGCACCATGGTGCTTTGGAGGCGTTGGTAAGATGTGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR CAA 90 bp GCCAGAGTGCAGCACTGGCCTTGTGAGTTATTTTCAGGAGTTTTATCAACAAAGCCTGATTCTGCCCTTTaGCTGAGCCTTAGGTCCCCA +
Preference number: 3 (lower is better)
Translates to: ARVQHWPCELFSGVLSTKPDSAL*LSLRSP
Trigger: TGGGGACCTAAGGCTCAGCAAAAGGGCAGAATCAGG...CTTTGTTGATAAAACTCCTGAAAATAACTCACAAGGCCAGTGCTGCACTCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR CAA 90 bp GAACTTCTGGGGTCACCCTGTGCCTATTCCCTTTTGGTGCTGAACATGACACTTATGCTACTATTGGACTaGATTGGAGAGAGGGGCATC +
Preference number: 3 (lower is better)
Translates to: ELLGSPCAYSLLVLNMTLMLLLD*IGERGI
Trigger: GATGCCCCTCTCTCCAATCAAGTCCAATAGTAGCAT...AAGTGTCATGTTCAGCACCAAAAGGGAATAGGCACAGGGTGACCCCAGAAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR CAA 90 bp ATGGCAGTATTCTATGATCACAGATGCCCCCAGAGCCTGGGGGTAACCGACACTCAGTTAATGCTACTATaGGACTTGATTGGAGAGAGG +
Preference number: 3 (lower is better)
Translates to: MAVFYDHRCPQSLGVTDTQLMLL*DLIGER
Trigger: CCTCTCTCCAATCAAGTCCAATAGTAGCATTAACTG...AGTGTCGGTTACCCCCAGGCTCTGGGGGCATCTGTGATCATAGAATACTGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR GCA 72 bp AGGGACAAAAAGTGCCTAACTGGGAATGGTGGTGCTTaGAACACTGGTGATGTCGCCAAGAATAGTCTGAAG +
Preference number: 3 (lower is better)
Translates to: RDKKCLTGNGGA*NTGDVAKNSLK
Trigger: CTTCAGACTATTCTTGGCGACATCACCAGTGTTGCAAGCACCACCATTCCCAGTTAGGCACTTTTTGTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR CCA 72 bp CCTGAAGCACACTGTTCAGTCTATACCACTGATATGTaGTCAGGGACATTTCGGTGCAAGAACGCATTCTGC +
Preference number: 3 (lower is better)
Translates to: PEAHCSVYTTDM*SGTFRCKNAFC
Trigger: GCAGAATGCGTTCTTGCACCGAAATGTCCCTGACCACATATCAGTGGTATAGACTGAACAGTGTGCTTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR GCA 72 bp GGAGTGGTGCCAAGATATGAACCCACATCTCATGTTTaGTTGAGCCCAAATCCTTTCACTTATGTCAGGCTG +
Preference number: 3 (lower is better)
Translates to: GVVPRYEPTSHV*LSPNPFTYVRL
Trigger: CAGCCTGACATAAGTGAAAGGATTTGGGCTCAAGCAAACATGAGATGTGGGTTCATATCTTGGCACCACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR CAA 90 bp AGGAAACTGATTTCAAGTCCAGCTGAACAGGCCCAGGTATGGTTTGGTTTAGTTCTAAAAGGGCCTGTTTaGGTGGCTAATCGCAAGTCA +
Preference number: 3 (lower is better)
Translates to: RKLISSPAEQAQVWFGLVLKGPV*VANRKS
Trigger: TGACTTGCGATTAGCCACCAAAACAGGCCCTTTTAG...AACTAAACCAAACCATACCTGGGCCTGTTCAGCTGGACTTGAAATCAGTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR TCA 72 bp TGGTGCCAAGATATGAACCCACATCTCATGTTTGCTTaGGCCCAAATCCTTTCACTTATGTCAGGCTGTTTC +
Preference number: 3 (lower is better)
Translates to: WCQDMNPHLMFA*AQILSLMSGCF
Trigger: GAAACAGCCTGACATAAGTGAAAGGATTTGGGCTCAAGCAAACATGAGATGTGGGTTCATATCTTGGCACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR GCA 72 bp GTCTATACCACTGATATGTGGTCAGGGACATTTCGGTaGAAGAACGCATTCTGCAAAATTACCTTGATTCAC +
Preference number: 3 (lower is better)
Translates to: VYTTDMWSGTFR*KNAFCKITLIH
Trigger: GTGAATCAAGGTAATTTTGCAGAATGCGTTCTTGCACCGAAATGTCCCTGACCACATATCAGTGGTATAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR CCA 72 bp AAACTGATTTCAAGTCCAGCTGAACAGGCCCAGGTATaGTTTGGTTTAGTTTGGTTGGTGATGCAAGTAACA +
Preference number: 3 (lower is better)
Translates to: KLISSPAEQAQV*FGLVWLVMQVT
Trigger: TGTTACTTGCATCACCAACCAAACTAAACCAAACCATACCTGGGCCTGTTCAGCTGGACTTGAAATCAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR CCA 72 bp CATAACAGTGGCAAGAGCCATTCTCTAAATACAATCTaGTACCCAGACTATGACAGATGCACGTGGAAAATG +
Preference number: 3 (lower is better)
Translates to: HNSGKSHSLNTI*YPDYDRCTWKM
Trigger: CATTTTCCACGTGCATCTGTCATAGTCTGGGTACCAGATTGTATTTAGAGAATGGCTCTTGCCACTGTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR TCA 72 bp ACAACCTACATGTGCCAGAGTGCAGCACTGGCCTTGTaGGTTATTTTCAGGAGTTTTATCAACAAAGAACAA +
Preference number: 3 (lower is better)
Translates to: TTYMCQSAALAL*VIFRSFINKEQ
Trigger: TTGTTCTTTGTTGATAAAACTCCTGAAAATAACTCACAAGGCCAGTGCTGCACTCTGGCACATGTAGGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR-3UTR CAA 90 bp AGGAAACTGATTTCAAGTCCAGCTGAACAGGCCCAGGTATGGTTTGGTTTAGTTTCAATAAGGGTGATTTaGCAAACAGGTTGGCTTTTT +
Preference number: 3 (lower is better)
Translates to: RKLISSPAEQAQVWFGLVSIRVI*QTGWLF
Trigger: AAAAAGCCAACCTGTTTGCAAAATCACCCTTATTGA...AACTAAACCAAACCATACCTGGGCCTGTTCAGCTGGACTTGAAATCAGTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR TCA 72 bp AAACATGGACAGAAAATGATCATAGTCCATTACGTATaGATCATCCAATACTTGGTCGGAGAGGCACTGCAT +
Preference number: 3 (lower is better)
Translates to: KHGQKMIIVHYV*IIQYLVGEALH
Trigger: ATGCAGTGCCTCTCCGACCAAGTATTGGATGATTCATACGTAATGGACTATGATCATTTTCTGTCCATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR TCA 72 bp CTGCTCCTTTTGGGTGCAACAAATCATGACTCATTGTaGTGGATAAAATTAACCTCCAACTTGATGGGATAT +
Preference number: 3 (lower is better)
Translates to: LLLLGATNHDSL*WIKLTSNLMGY
Trigger: ATATCCCATCAAGTTGGAGGTTAATTTTATCCATCACAATGAGTCATGATTTGTTGCACCCAAAAGGAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR TCA 72 bp CATTTCGGTGCAAGAACGCATTCTGCAAAATTACCTTaGTTCACCTTAAAATTCAACAGGCTGTTACTAAAA +
Preference number: 3 (lower is better)
Translates to: HFGARTHSAKLP*FTLKFNRLLLK
Trigger: TTTTAGTAACAGCCTGTTGAATTTTAAGGTGAATCAAGGTAATTTTGCAGAATGCGTTCTTGCACCGAAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CCA 90 bp CCATGGCCACTCCCACCACTGGTTTATGGGCATAGGCAACAGAGGGTCACATCTGGGAGCCCGCCAGCATaGAGGCCACCAGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PWPLPPLVYGHRQQRVTSGSPPA*RPPGPR
Trigger: CCTGGGCCCTGGTGGCCTCCATGCTGGCGGGCTCCC...AGATGTGACCCTCTGTTGCCTATGCCCATAAACCAGTGGTGGGAGTGGCCATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR GCA 90 bp TACTTGGTCGGAGAGGCACTGCATCTAAAAGGGCCTGTTTTGGTGGCTAATCGCTGCCCACAAGCAGGGTaGTCAGCCGCCGCAGGACCA +
Preference number: 4 (lower is better)
Translates to: YLVGEALHLKGPVLVANRCPQAG*SAAAGP
Trigger: TGGTCCTGCGGCGGCTGAGCACCCTGCTTGTGGGCA...GCGATTAGCCACCAAAACAGGCCCTTTTAGATGCAGTGCCTCTCCGACCAAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR GCA 90 bp AAGAGGGGATATCTTATCACAGGGCGTGGAACTGTGCCTTTGTGGATGGAGGTGCTGGGAGGTGGAGGTTaGGGTGAGCCGAGATCGGGC +
Preference number: 4 (lower is better)
Translates to: KRGYLITGRGTVPLWMEVLGGGG*GEPRSG
Trigger: GCCCGATCTCGGCTCACCGCAACCTCCACCTCCCAG...CACCTCCATCCACAAAGGCACAGTTCCACGCCCTGTGATAAGATATCCCCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR TCA 90 bp GAACTTCTGGGGTCACCCTGTGCCTATTCCCTTTTGGTGCTGAACATGACACTTACGGGGACAACTCCTTaGGGAGGGAGCCCGCCAGCA +
Preference number: 4 (lower is better)
Translates to: ELLGSPCAYSLLVLNMTLTGTTP*GGSPPA
Trigger: TGCTGGCGGGCTCCCTCCTCAAGGAGTTGTCCCCGT...AAGTGTCATGTTCAGCACCAAAAGGGAATAGGCACAGGGTGACCCCAGAAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR GCA 90 bp TACCAACGCCTCCAAAGCACCATGGTGCCACCTCCCATATCTCATCACCTGTGTTGTACCAGATGGCCGTaGCCACAAGCAGGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: YQRLQSTMVPPPISHHLCCTRWP*PQAGCS
Trigger: TGAGCACCCTGCTTGTGGGCACGGCCATCTGGTACA...ACACAGGTGATGAGATATGGGAGGTGGCACCATGGTGCTTTGGAGGCGTTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR GCA 90 bp CAGGCCCAGGTATGGTTTGGTTTAGTTTGGTTGGTGATGCAAGTAACAGGAGGGCCGAGATCGGGCCATTaGACCCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: QAQVWFGLVWLVMQVTGGPRSGH*TPAWAT
Trigger: TGTTGCCCAGGCTGGGGTGCAATGGCCCGATCTCGG...CCCTCCTGTTACTTGCATCACCAACCAAACTAAACCAAACCATACCTGGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR GCA 90 bp CCAACGCCTCCAAAGCACCATGGTGCCACCTCCCATATCTCATCACCTGTGTTTTCGCTCAGGCTGGAGTaGAGTGGCGTGATCCTAGCT +
Preference number: 4 (lower is better)
Translates to: PTPPKHHGATSHISSPVFSLRLE*SGVILA
Trigger: AGCTAGGATCACGCCACTGCACTCCAGCCTGAGCGA...AAACACAGGTGATGAGATATGGGAGGTGGCACCATGGTGCTTTGGAGGCGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR GCA 90 bp CAGGCCCAGGTATGGTTTGGTTTAGTTTGGTTGGTGATGCAAGTAACAGGAGGGTCGCAGCGCTCCAGATaGTCCATGCCGGATCTCGTC +
Preference number: 4 (lower is better)
Translates to: QAQVWFGLVWLVMQVTGGSQRSR*SMPDLV
Trigger: GACGAGATCCGGCATGGAGCATCTGGAGCGCTGCGA...CCCTCCTGTTACTTGCATCACCAACCAAACTAAACCAAACCATACCTGGGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR GCA 90 bp ATGGCAGTATTCTATGATCACAGATGCCCCCAGAGCCTGGGGGTAACCGACACTGAGGGACCACAGCCATaGCACCCTTCAATAAGGGTG +
Preference number: 4 (lower is better)
Translates to: MAVFYDHRCPQSLGVTDTEGPQP*HPSIRV
Trigger: CACCCTTATTGAAGGGTGGCATGGCTGTGGTCCCTC...AGTGTCGGTTACCCCCAGGCTCTGGGGGCATCTGTGATCATAGAATACTGCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CCA 90 bp GCCAGAGTGCAGCACTGGCCTTGTGAGTTATTTTCAGGAGTTTTATCAACAAAGGACCCCCTCCAGGGCTaGGGACTGGTAGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: ARVQHWPCELFSGVLSTKDPLQG*GLVAAA
Trigger: GGCAGCTGCTACCAGTCCCCAGCCCTGGAGGGGGTC...CTTTGTTGATAAAACTCCTGAAAATAACTCACAAGGCCAGTGCTGCACTCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CCA 90 bp CCATGGCCACTCCCACCACTGGTTTATGGGCATAGGCAACAGAGGGTCACATCTGTGCCTAACTGGGAATaGTGGTGCTTGCAACACTGG +
Preference number: 4 (lower is better)
Translates to: PWPLPPLVYGHRQQRVTSVPNWE*WCLQHW
Trigger: CCAGTGTTGCAAGCACCACCATTCCCAGTTAGGCAC...AGATGTGACCCTCTGTTGCCTATGCCCATAAACCAGTGGTGGGAGTGGCCATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR TCA 90 bp CCATGGCCACTCCCACCACTGGTTTATGGGCATAGGCAACAGAGGGTCACATCTTCTCTTCTACAATCATaGGGGCGCAGAAGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: PWPLPPLVYGHRQQRVTSSLLQS*GRRRSA
Trigger: TGCTGACCTTCTGCGCCCTCATGATTGTAGAAGAGA...AGATGTGACCCTCTGTTGCCTATGCCCATAAACCAGTGGTGGGAGTGGCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR GCA 90 bp GAACTTCTGGGGTCACCCTGTGCCTATTCCCTTTTGGTGCTGAACATGACACTTCCTTCCTGGTGGCACTaGTGCTTGCTCTGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: ELLGSPCAYSLLVLNMTLPSWWH*CLLWCS
Trigger: GGAACACCAGAGCAAGCAGCAGTGCCACCAGGAAGG...AAGTGTCATGTTCAGCACCAAAAGGGAATAGGCACAGGGTGACCCCAGAAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR GCA 90 bp CCATGGCCACTCCCACCACTGGTTTATGGGCATAGGCAACAGAGGGTCACATCTAAAACAACCTACATGTaGCAGAGTGCAGCACTGGCC +
Preference number: 4 (lower is better)
Translates to: PWPLPPLVYGHRQQRVTSKTTYM*QSAALA
Trigger: GGCCAGTGCTGCACTCTGGCACATGTAGGTTGTTTT...AGATGTGACCCTCTGTTGCCTATGCCCATAAACCAGTGGTGGGAGTGGCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR GCA 90 bp TACTTGGTCGGAGAGGCACTGCATCTAAAAGGGCCTGTTTTGGTGGCTAATCGCCCTTCAACAAGCCCCTaGCATCTACTCCATGGCCAC +
Preference number: 4 (lower is better)
Translates to: YLVGEALHLKGPVLVANRPSTSP*HLLHGH
Trigger: GTGGCCATGGAGTAGATGGCAGGGGCTTGTTGAAGG...GCGATTAGCCACCAAAACAGGCCCTTTTAGATGCAGTGCCTCTCCGACCAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR GCA 90 bp ATGGCAGTATTCTATGATCACAGATGCCCCCAGAGCCTGGGGGTAACCGACACTTTCTATGATCACAGATaGCCCCAGAGCCTGGGGGTA +
Preference number: 4 (lower is better)
Translates to: MAVFYDHRCPQSLGVTDTFYDHR*PQSLGV
Trigger: TACCCCCAGGCTCTGGGGGCATCTGTGATCATAGAA...AGTGTCGGTTACCCCCAGGCTCTGGGGGCATCTGTGATCATAGAATACTGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CCA 90 bp TACTTGGTCGGAGAGGCACTGCATCTAAAAGGGCCTGTTTTGGTGGCTAATCGCCACTGCTGCTTGCTCTaGTGTTCCTTTCTGACCCCC +
Preference number: 4 (lower is better)
Translates to: YLVGEALHLKGPVLVANRHCCLL*CSFLTP
Trigger: GGGGGTCAGAAAGGAACACCAGAGCAAGCAGCAGTG...GCGATTAGCCACCAAAACAGGCCCTTTTAGATGCAGTGCCTCTCCGACCAAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CCA 90 bp GAACTTCTGGGGTCACCCTGTGCCTATTCCCTTTTGGTGCTGAACATGACACTTCAAAAGCCCCCTTCCTaGTGGCACTGCTGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: ELLGSPCAYSLLVLNMTLQKPPS*WHCCLL
Trigger: GAGCAAGCAGCAGTGCCACCAGGAAGGGGGCTTTTG...AAGTGTCATGTTCAGCACCAAAAGGGAATAGGCACAGGGTGACCCCAGAAGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CCA 90 bp AAGAGGGGATATCTTATCACAGGGCGTGGAACTGTGCCTTTGTGGATGGAGGTGGAGGCAGGGAGACTATaGCCTGCTAAGCACAGATGC +
Preference number: 4 (lower is better)
Translates to: KRGYLITGRGTVPLWMEVEAGRL*PAKHRC
Trigger: GCATCTGTGCTTAGCAGGCCATAGTCTCCCTGCCTC...CACCTCCATCCACAAAGGCACAGTTCCACGCCCTGTGATAAGATATCCCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR TCA 90 bp GATCATAGTCCATTACGTATGAATCATCCAATACTTGGTCGGAGAGGCACTGCATCTGGTGTTCCTTTCTaGCCCCCTCCAGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: DHSPLRMNHPILGRRGTASGVPF*PPPGLG
Trigger: CCCCAGCCCTGGAGGGGGTCAGAAAGGAACACCAGA...TGCAGTGCCTCTCCGACCAAGTATTGGATGATTCATACGTAATGGACTATGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR TCA 90 bp TACTTGGTCGGAGAGGCACTGCATCTAAAAGGGCCTGTTTTGGTGGCTAATCGCCAGGAAGGAGTGACCTaGGATGTCAAAGCCATGCCA +
Preference number: 4 (lower is better)
Translates to: YLVGEALHLKGPVLVANRQEGVT*DVKAMP
Trigger: TGGCATGGCTTTGACATCTCAGGTCACTCCTTCCTG...GCGATTAGCCACCAAAACAGGCCCTTTTAGATGCAGTGCCTCTCCGACCAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR TCA 90 bp GATCATAGTCCATTACGTATGAATCATCCAATACTTGGTCGGAGAGGCACTGCACCACAACCAGGGTGGTaGTGGCGGTGTGGAGGCAGT +
Preference number: 4 (lower is better)
Translates to: DHSPLRMNHPILGRRGTAPQPGW*WRCGGS
Trigger: ACTGCCTCCACACCGCCATCACCACCCTGGTTGTGG...TGCAGTGCCTCTCCGACCAAGTATTGGATGATTCATACGTAATGGACTATGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR TCA 90 bp AAGAGGGGATATCTTATCACAGGGCGTGGAACTGTGCCTTTGTGGATGGAGGTGATTCTGCCCTTTTGCTaGGCCTTAGGTCCCCACTCT +
Preference number: 4 (lower is better)
Translates to: KRGYLITGRGTVPLWMEVILPFC*ALGPHS
Trigger: AGAGTGGGGACCTAAGGCTCAGCAAAAGGGCAGAAT...CACCTCCATCCACAAAGGCACAGTTCCACGCCCTGTGATAAGATATCCCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR TCA 90 bp AGGAAACTGATTTCAAGTCCAGCTGAACAGGCCCAGGTATGGTTTGGTTTAGTTATAAAGAACCCTGCCTaGGCCGGGCGCGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: RKLISSPAEQAQVWFGLVIKNPA*AGRGGS
Trigger: TGAGCCACCGCGCCCGGCTCAGGCAGGGTTCTTTAT...AACTAAACCAAACCATACCTGGGCCTGTTCAGCTGGACTTGAAATCAGTTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR GCA 90 bp ATGGCAGTATTCTATGATCACAGATGCCCCCAGAGCCTGGGGGTAACCGACACTACCACCCACCAAAACTaGCTGGTACACTTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: MAVFYDHRCPQSLGVTDTTTHQN*LVHFPS
Trigger: AGAGGGAAAGTGTACCAGGCAGTTTTGGTGGGTGGT...AGTGTCGGTTACCCCCAGGCTCTGGGGGCATCTGTGATCATAGAATACTGCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR GCA 90 bp CAGGCCCAGGTATGGTTTGGTTTAGTTTGGTTGGTGATGCAAGTAACAGGAGGGGTGATCCTAGCTCACTaGAACCTCTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: QAQVWFGLVWLVMQVTGGVILAH*NLCLLG
Trigger: ACCCAGGAGGCAGAGGTTGCAGTGAGCTAGGATCAC...CCCTCCTGTTACTTGCATCACCAACCAAACTAAACCAAACCATACCTGGGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR GCA 90 bp AAGAGGGGATATCTTATCACAGGGCGTGGAACTGTGCCTTTGTGGATGGAGGTGTCTGGGGTCACCCTGTaGCTATTCCCTTTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: KRGYLITGRGTVPLWMEVSGVTL*LFPFGA
Trigger: AGCACCAAAAGGGAATAGGCACAGGGTGACCCCAGA...CACCTCCATCCACAAAGGCACAGTTCCACGCCCTGTGATAAGATATCCCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CCA 90 bp GATCATAGTCCATTACGTATGAATCATCCAATACTTGGTCGGAGAGGCACTGCAGCGGTGTGGAGGCAGTaGCTTCGGTCCGTCTTCACC +
Preference number: 4 (lower is better)
Translates to: DHSPLRMNHPILGRRGTAAVWRQ*LRSVFT
Trigger: GGTGAAGACGGACCGAAGCCACTGCCTCCACACCGC...TGCAGTGCCTCTCCGACCAAGTATTGGATGATTCATACGTAATGGACTATGATC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CCA 90 bp AGGAAACTGATTTCAAGTCCAGCTGAACAGGCCCAGGTATGGTTTGGTTTAGTTGTGGTGATGGCGGTGTaGAGGCAGTGGCTTCGGTCC +
Preference number: 4 (lower is better)
Translates to: RKLISSPAEQAQVWFGLVVVMAV*RQWLRS
Trigger: GGACCGAAGCCACTGCCTCCACACCGCCATCACCAC...AACTAAACCAAACCATACCTGGGCCTGTTCAGCTGGACTTGAAATCAGTTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CCA 90 bp CAGGCCCAGGTATGGTTTGGTTTAGTTTGGTTGGTGATGCAAGTAACAGGAGGGGCCTCCAAAGCACCATaGTGCCACCTCCCATATCTC +
Preference number: 4 (lower is better)
Translates to: QAQVWFGLVWLVMQVTGGASKAP*CHLPYL
Trigger: GAGATATGGGAGGTGGCACCATGGTGCTTTGGAGGC...CCCTCCTGTTACTTGCATCACCAACCAAACTAAACCAAACCATACCTGGGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR TCA 90 bp GATCATAGTCCATTACGTATGAATCATCCAATACTTGGTCGGAGAGGCACTGCACGTTGCGCTTGTTGCTaGGGTAGCTCTCGGGCAACG +
Preference number: 4 (lower is better)
Translates to: DHSPLRMNHPILGRRGTARCACC*GSSRAT
Trigger: CGTTGCCCGAGAGCTACCTCAGCAACAAGCGCAACG...TGCAGTGCCTCTCCGACCAAGTATTGGATGATTCATACGTAATGGACTATGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR TCA 90 bp TACTTGGTCGGAGAGGCACTGCATCTAAAAGGGCCTGTTTTGGTGGCTAATCGCACATCAACACCCAGATaGAAGTCAGAATGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: YLVGEALHLKGPVLVANRTSTPR*KSECPG
Trigger: CCCTGGGCATTCTGACTTTCATCTGGGTGTTGATGT...GCGATTAGCCACCAAAACAGGCCCTTTTAGATGCAGTGCCTCTCCGACCAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR TCA 90 bp TACCAACGCCTCCAAAGCACCATGGTGCCACCTCCCATATCTCATCACCTGTGTCTGGTACCCAGACTATaGCAGATGCACGTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: YQRLQSTMVPPPISHHLCLVPRL*QMHVEN
Trigger: ATTTTCCACGTGCATCTGTCATAGTCTGGGTACCAG...ACACAGGTGATGAGATATGGGAGGTGGCACCATGGTGCTTTGGAGGCGTTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR GCA 90 bp GATCATAGTCCATTACGTATGAATCATCCAATACTTGGTCGGAGAGGCACTGCAGCTCCAGATGCTCCATaGCGGATCTCGTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: DHSPLRMNHPILGRRGTAAPDAP*RISSAT
Trigger: GGTGGCTGACGAGATCCGGCATGGAGCATCTGGAGC...TGCAGTGCCTCTCCGACCAAGTATTGGATGATTCATACGTAATGGACTATGATC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR GCA 90 bp GAACTTCTGGGGTCACCCTGTGCCTATTCCCTTTTGGTGCTGAACATGACACTTCAGCAGAGTGATCAGTaGACTCAGCACATGACCCTG +
Preference number: 4 (lower is better)
Translates to: ELLGSPCAYSLLVLNMTLQQSDQ*TQHMTL
Trigger: CAGGGTCATGTGCTGAGTGCACTGATCACTCTGCTG...AAGTGTCATGTTCAGCACCAAAAGGGAATAGGCACAGGGTGACCCCAGAAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR GCA 90 bp CCATGGCCACTCCCACCACTGGTTTATGGGCATAGGCAACAGAGGGTCACATCTCATCACCTGTGTTTCTaGTCCTTTTGGGTGCAACAA +
Preference number: 4 (lower is better)
Translates to: PWPLPPLVYGHRQQRVTSHHLCF*SFWVQQ
Trigger: TTGTTGCACCCAAAAGGAGCAGAAACACAGGTGATG...AGATGTGACCCTCTGTTGCCTATGCCCATAAACCAGTGGTGGGAGTGGCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CCA 90 bp AGGAAACTGATTTCAAGTCCAGCTGAACAGGCCCAGGTATGGTTTGGTTTAGTTAAGCCCCCTTCCTGGTaGCACTGCTGCTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: RKLISSPAEQAQVWFGLVKPPSW*HCCLLW
Trigger: CCAGAGCAAGCAGCAGTGCCACCAGGAAGGGGGCTT...AACTAAACCAAACCATACCTGGGCCTGTTCAGCTGGACTTGAAATCAGTTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CCA 90 bp TACTTGGTCGGAGAGGCACTGCATCTAAAAGGGCCTGTTTTGGTGGCTAATCGCTTCAAACTACAGCTCTaGGGAGGAAGTCCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: YLVGEALHLKGPVLVANRFKLQL*GGSPGE
Trigger: TTCCCCAGGACTTCCTCCCCAGAGCTGTAGTTTGAA...GCGATTAGCCACCAAAACAGGCCCTTTTAGATGCAGTGCCTCTCCGACCAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CCA 90 bp CCATGGCCACTCCCACCACTGGTTTATGGGCATAGGCAACAGAGGGTCACATCTTCACAAATGAACTTCTaGGGTCACCCTGTGCCTATT +
Preference number: 4 (lower is better)
Translates to: PWPLPPLVYGHRQQRVTSSQMNF*GHPVPI
Trigger: AATAGGCACAGGGTGACCCCAGAAGTTCATTTGTGA...AGATGTGACCCTCTGTTGCCTATGCCCATAAACCAGTGGTGGGAGTGGCCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR CAA 72 bp GGACCACAGCCATGCCACCCTTCAATAAGGGTGATTTaGCAAACAGGTTGGCTTTTTGCCATCAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: GPQPCHPSIRVI*QTGWLFAIRGR
Trigger: CCTCCCTCTGATGGCAAAAAGCCAACCTGTTTGCAAAATCACCCTTATTGAAGGGTGGCATGGCTGTGGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR TCA 90 bp TACCAACGCCTCCAAAGCACCATGGTGCCACCTCCCATATCTCATCACCTGTGTTTTAAGTGTCACAAATaGACTTCTGGGGTCACCCTG +
Preference number: 4 (lower is better)
Translates to: YQRLQSTMVPPPISHHLCFKCHK*TSGVTL
Trigger: CAGGGTGACCCCAGAAGTTCATTTGTGACACTTAAA...ACACAGGTGATGAGATATGGGAGGTGGCACCATGGTGCTTTGGAGGCGTTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR TCA 90 bp ATGGCAGTATTCTATGATCACAGATGCCCCCAGAGCCTGGGGGTAACCGACACTGATGCACGTGGAAAATaGGGCGTCAGTGAATTAATC +
Preference number: 4 (lower is better)
Translates to: MAVFYDHRCPQSLGVTDTDARGK*GVSELI
Trigger: GATTAATTCACTGACGCCTCATTTTCCACGTGCATC...AGTGTCGGTTACCCCCAGGCTCTGGGGGCATCTGTGATCATAGAATACTGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR GCA 90 bp GATCATAGTCCATTACGTATGAATCATCCAATACTTGGTCGGAGAGGCACTGCAGGACCAAGCCAGCCTTaGCGGTCAGATGGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: DHSPLRMNHPILGRRGTAGPSQP*RSDGSW
Trigger: CCAACTACCATCTGACCGGCAAGGCTGGCTTGGTCC...TGCAGTGCCTCTCCGACCAAGTATTGGATGATTCATACGTAATGGACTATGATC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR GCA 90 bp GCTGAACAGGCCCAGGTATGGTTTGGTTTAGTTTGGTTGGTGATGCAAGTAACAGGGACTGGTAGCAGCTaGCCGTGTAGTGTTCGATGT +
Preference number: 4 (lower is better)
Translates to: AEQAQVWFGLVWLVMQVTGTGSS*PCSVRC
Trigger: ACATCGAACACTACACGGGCAGCTGCTACCAGTCCC...TGTTACTTGCATCACCAACCAAACTAAACCAAACCATACCTGGGCCTGTTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR GCA 90 bp TACTTGGTCGGAGAGGCACTGCATCTAAAAGGGCCTGTTTTGGTGGCTAATCGCAGGTGTGAACCACCATaGCTGGCTGGAAAATACTGT +
Preference number: 4 (lower is better)
Translates to: YLVGEALHLKGPVLVANRRCEPP*LAGKYC
Trigger: ACAGTATTTTCCAGCCAGGCATGGTGGTTCACACCT...GCGATTAGCCACCAAAACAGGCCCTTTTAGATGCAGTGCCTCTCCGACCAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR GCA 90 bp CAGGCCCAGGTATGGTTTGGTTTAGTTTGGTTGGTGATGCAAGTAACAGGAGGGTCCAAAGCACCATGGTaGCACCTCCCATATCTCATC +
Preference number: 4 (lower is better)
Translates to: QAQVWFGLVWLVMQVTGGSKAPW*HLPYLI
Trigger: GATGAGATATGGGAGGTGGCACCATGGTGCTTTGGA...CCCTCCTGTTACTTGCATCACCAACCAAACTAAACCAAACCATACCTGGGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CCA 90 bp GCCAGAGTGCAGCACTGGCCTTGTGAGTTATTTTCAGGAGTTTTATCAACAAAGTGCAGATGTACCAGATaGCCGTGCCCACAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: ARVQHWPCELFSGVLSTKCRCTR*PCPQAG
Trigger: CCCTGCTTGTGGGCACGGCCATCTGGTACATCTGCA...CTTTGTTGATAAAACTCCTGAAAATAACTCACAAGGCCAGTGCTGCACTCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CCA 90 bp TACCAACGCCTCCAAAGCACCATGGTGCCACCTCCCATATCTCATCACCTGTGTGTGAACCACCATGCCTaGCTGGAAAATACTGTTAAG +
Preference number: 4 (lower is better)
Translates to: YQRLQSTMVPPPISHHLCVNHHA*LENTVK
Trigger: CTTAACAGTATTTTCCAGCCAGGCATGGTGGTTCAC...ACACAGGTGATGAGATATGGGAGGTGGCACCATGGTGCTTTGGAGGCGTTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CCA 90 bp AAGAGGGGATATCTTATCACAGGGCGTGGAACTGTGCCTTTGTGGATGGAGGTGGAATCATCCAATACTTaGTCGGAGAGGCACTGCATC +
Preference number: 4 (lower is better)
Translates to: KRGYLITGRGTVPLWMEVESSNT*SERHCI
Trigger: GATGCAGTGCCTCTCCGACCAAGTATTGGATGATTC...CACCTCCATCCACAAAGGCACAGTTCCACGCCCTGTGATAAGATATCCCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CCA 90 bp GAACTTCTGGGGTCACCCTGTGCCTATTCCCTTTTGGTGCTGAACATGACACTTCTGGTCTCAAACTCCTaGGATCCAGTAATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: ELLGSPCAYSLLVLNMTLLVSNS*DPVILP
Trigger: TGGGAGGATTACTGGATCCCAGGAGTTTGAGACCAG...AAGTGTCATGTTCAGCACCAAAAGGGAATAGGCACAGGGTGACCCCAGAAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CCA 90 bp AAGAGGGGATATCTTATCACAGGGCGTGGAACTGTGCCTTTGTGGATGGAGGTGGGAACTGTGCCTTTGTaGATGGAGGTGACAGGATTT +
Preference number: 4 (lower is better)
Translates to: KRGYLITGRGTVPLWMEVGTVPL*MEVTGF
Trigger: AAATCCTGTCACCTCCATCCACAAAGGCACAGTTCC...CACCTCCATCCACAAAGGCACAGTTCCACGCCCTGTGATAAGATATCCCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CCA 90 bp AAGAGGGGATATCTTATCACAGGGCGTGGAACTGTGCCTTTGTGGATGGAGGTGCTTAAGGAGACAGTCTaGGAGAGAAGAGGGGATATC +
Preference number: 4 (lower is better)
Translates to: KRGYLITGRGTVPLWMEVLKETV*ERRGDI
Trigger: GATATCCCCTCTTCTCTCCCAGACTGTCTCCTTAAG...CACCTCCATCCACAAAGGCACAGTTCCACGCCCTGTGATAAGATATCCCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CCA 90 bp GAACTTCTGGGGTCACCCTGTGCCTATTCCCTTTTGGTGCTGAACATGACACTTCTAAGCATGGACAAGTaGCGGAAGCCTCATCGATAC +
Preference number: 4 (lower is better)
Translates to: ELLGSPCAYSLLVLNMTLLSMDK*RKPHRY
Trigger: GTATCGATGAGGCTTCCGCCACTTGTCCATGCTTAG...AAGTGTCATGTTCAGCACCAAAAGGGAATAGGCACAGGGTGACCCCAGAAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR TCA 90 bp CCAACGCCTCCAAAGCACCATGGTGCCACCTCCCATATCTCATCACCTGTGTTTTTCAGTCTATACCACTaGTATGTGGTCAGGGACATT +
Preference number: 4 (lower is better)
Translates to: PTPPKHHGATSHISSPVFFSLYH*YVVRDI
Trigger: AATGTCCCTGACCACATATCAGTGGTATAGACTGAA...AAACACAGGTGATGAGATATGGGAGGTGGCACCATGGTGCTTTGGAGGCGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR TCA 90 bp CAGGCCCAGGTATGGTTTGGTTTAGTTTGGTTGGTGATGCAAGTAACAGGAGGGGACAAAGCTGGAAACTaGAAAGTGCTGCAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: QAQVWFGLVWLVMQVTGGDKAGN*KVLQRG
Trigger: TCCCCTTTGCAGCACTTTTCAGTTTCCAGCTTTGTC...CCCTCCTGTTACTTGCATCACCAACCAAACTAAACCAAACCATACCTGGGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR GCA 90 bp GCTGAACAGGCCCAGGTATGGTTTGGTTTAGTTTGGTTGGTGATGCAAGTAACAGAGATGTCAAAGCCATaGCAAAAGCCCCCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: AEQAQVWFGLVWLVMQVTEMSKP*QKPPSW
Trigger: CCAGGAAGGGGGCTTTTGGCATGGCTTTGACATCTC...TGTTACTTGCATCACCAACCAAACTAAACCAAACCATACCTGGGCCTGTTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR GCA 90 bp GATCATAGTCCATTACGTATGAATCATCCAATACTTGGTCGGAGAGGCACTGCAGGGAATGGTGGTGCTTaGAACACTGGTGATGTCGCC +
Preference number: 4 (lower is better)
Translates to: DHSPLRMNHPILGRRGTAGNGGA*NTGDVA
Trigger: GGCGACATCACCAGTGTTGCAAGCACCACCATTCCC...TGCAGTGCCTCTCCGACCAAGTATTGGATGATTCATACGTAATGGACTATGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR GCA 90 bp AGGAAACTGATTTCAAGTCCAGCTGAACAGGCCCAGGTATGGTTTGGTTTAGTTTCCAACAGGTACAGATaGCCTGGGCCACAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: RKLISSPAEQAQVWFGLVSNRYR*PGPQQS
Trigger: ACTCTGCTGTGGCCCAGGGCATCTGTACCTGTTGGA...AACTAAACCAAACCATACCTGGGCCTGTTCAGCTGGACTTGAAATCAGTTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR GCA 90 bp CAGGCCCAGGTATGGTTTGGTTTAGTTTGGTTGGTGATGCAAGTAACAGGAGGGCCAGACTATGACAGATaGACGTGGAAAATGAGGCGT +
Preference number: 4 (lower is better)
Translates to: QAQVWFGLVWLVMQVTGGPDYDR*TWKMRR
Trigger: ACGCCTCATTTTCCACGTGCATCTGTCATAGTCTGG...CCCTCCTGTTACTTGCATCACCAACCAAACTAAACCAAACCATACCTGGGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CCA 90 bp TACTTGGTCGGAGAGGCACTGCATCTAAAAGGGCCTGTTTTGGTGGCTAATCGCAAATCTAAAGACAACTaGAACCAGGGAGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: YLVGEALHLKGPVLVANRKSKDN*NQGEGS
Trigger: GCTGCCTTCTCCCTGGTTCCAGTTGTCTTTAGATTT...GCGATTAGCCACCAAAACAGGCCCTTTTAGATGCAGTGCCTCTCCGACCAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CCA 90 bp CCAACGCCTCCAAAGCACCATGGTGCCACCTCCCATATCTCATCACCTGTGTTTACCACCATGCCTGGCTaGAAAATACTGTTAAGTAAC +
Preference number: 4 (lower is better)
Translates to: PTPPKHHGATSHISSPVFTTMPG*KILLSN
Trigger: GTTACTTAACAGTATTTTCCAGCCAGGCATGGTGGT...AAACACAGGTGATGAGATATGGGAGGTGGCACCATGGTGCTTTGGAGGCGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CCA 90 bp AAGAGGGGATATCTTATCACAGGGCGTGGAACTGTGCCTTTGTGGATGGAGGTGGGCCCAGGTATGGTTTaGTTTAGTTTGGTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: KRGYLITGRGTVPLWMEVGPGMV*FSLVGD
Trigger: ATCACCAACCAAACTAAACCAAACCATACCTGGGCC...CACCTCCATCCACAAAGGCACAGTTCCACGCCCTGTGATAAGATATCCCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CCA 90 bp AGGAAACTGATTTCAAGTCCAGCTGAACAGGCCCAGGTATGGTTTGGTTTAGTTGGCCACTCCCACCACTaGTTTATGGGCATAGGCAAC +
Preference number: 4 (lower is better)
Translates to: RKLISSPAEQAQVWFGLVGHSHH*FMGIGN
Trigger: GTTGCCTATGCCCATAAACCAGTGGTGGGAGTGGCC...AACTAAACCAAACCATACCTGGGCCTGTTCAGCTGGACTTGAAATCAGTTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR CAA 72 bp AGGTGTAGTGCTTCTCAGTTAATGCTACTATTGGACTaGATTGGAGAGAGGGGCATCAAGGCGGCCTTAAGG +
Preference number: 4 (lower is better)
Translates to: RCSASQLMLLLD*IGERGIKAALR
Trigger: CCTTAAGGCCGCCTTGATGCCCCTCTCTCCAATCAAGTCCAATAGTAGCATTAACTGAGAAGCACTACACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR TCA 90 bp GCTGAACAGGCCCAGGTATGGTTTGGTTTAGTTTGGTTGGTGATGCAAGTAACACCACTTAAGCTTCAGTaGAGCCAGTCAGGTGTAGTG +
Preference number: 4 (lower is better)
Translates to: AEQAQVWFGLVWLVMQVTPLKLQ*SQSGVV
Trigger: CACTACACCTGACTGGCTTCACTGAAGCTTAAGTGG...TGTTACTTGCATCACCAACCAAACTAAACCAAACCATACCTGGGCCTGTTCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR TCA 90 bp TACTTGGTCGGAGAGGCACTGCATCTAAAAGGGCCTGTTTTGGTGGCTAATCGCAGAAGGCTCTGCAATTaGCACTTTCCACATACAGTT +
Preference number: 4 (lower is better)
Translates to: YLVGEALHLKGPVLVANRRRLCN*HFPHTV
Trigger: AACTGTATGTGGAAAGTGTCAATTGCAGAGCCTTCT...GCGATTAGCCACCAAAACAGGCCCTTTTAGATGCAGTGCCTCTCCGACCAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR TCA 90 bp AAGAGGGGATATCTTATCACAGGGCGTGGAACTGTGCCTTTGTGGATGGAGGTGCATCTCATGTTTGCTTaGGCCCAAATCCTTTCACTT +
Preference number: 4 (lower is better)
Translates to: KRGYLITGRGTVPLWMEVHLMFA*AQILSL
Trigger: AAGTGAAAGGATTTGGGCTCAAGCAAACATGAGATG...CACCTCCATCCACAAAGGCACAGTTCCACGCCCTGTGATAAGATATCCCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR TCA 90 bp GCTGAACAGGCCCAGGTATGGTTTGGTTTAGTTTGGTTGGTGATGCAAGTAACACATGGCAGTATTCTATaGTCACAGATGCCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: AEQAQVWFGLVWLVMQVTHGSIL*SQMPPE
Trigger: CTCTGGGGGCATCTGTGATCATAGAATACTGCCATG...TGTTACTTGCATCACCAACCAAACTAAACCAAACCATACCTGGGCCTGTTCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR GCA 90 bp AGGAAACTGATTTCAAGTCCAGCTGAACAGGCCCAGGTATGGTTTGGTTTAGTTTCCTGGTGGCACTGCTaGTTGCTCTGGTGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: RKLISSPAEQAQVWFGLVSWWHC*LLWCSF
Trigger: AAAGGAACACCAGAGCAAGCAGCAGTGCCACCAGGA...AACTAAACCAAACCATACCTGGGCCTGTTCAGCTGGACTTGAAATCAGTTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CCA 90 bp GCCAGAGTGCAGCACTGGCCTTGTGAGTTATTTTCAGGAGTTTTATCAACAAAGCTGGGGAGGAAGTCCTaGGGAAAAGGCTTTCGGATA +
Preference number: 4 (lower is better)
Translates to: ARVQHWPCELFSGVLSTKLGRKS*GKGFRI
Trigger: TATCCGAAAGCCTTTTCCCCAGGACTTCCTCCCCAG...CTTTGTTGATAAAACTCCTGAAAATAACTCACAAGGCCAGTGCTGCACTCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CCA 90 bp GAACTTCTGGGGTCACCCTGTGCCTATTCCCTTTTGGTGCTGAACATGACACTTTATACCACTGATATGTaGTCAGGGACATTTCGGTGC +
Preference number: 4 (lower is better)
Translates to: ELLGSPCAYSLLVLNMTLYTTDM*SGTFRC
Trigger: GCACCGAAATGTCCCTGACCACATATCAGTGGTATA...AAGTGTCATGTTCAGCACCAAAAGGGAATAGGCACAGGGTGACCCCAGAAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR TCA 90 bp CAGGCCCAGGTATGGTTTGGTTTAGTTTGGTTGGTGATGCAAGTAACAGGAGGGATGCCTATGCAAAACTaGCCAGTGGGAAATACTGTT +
Preference number: 4 (lower is better)
Translates to: QAQVWFGLVWLVMQVTGGMPMQN*PVGNTV
Trigger: AACAGTATTTCCCACTGGTCAGTTTTGCATAGGCAT...CCCTCCTGTTACTTGCATCACCAACCAAACTAAACCAAACCATACCTGGGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR TCA 90 bp ATGGCAGTATTCTATGATCACAGATGCCCCCAGAGCCTGGGGGTAACCGACACTATAGTCCATTACGTATaGATCATCCAATACTTGGTC +
Preference number: 4 (lower is better)
Translates to: MAVFYDHRCPQSLGVTDTIVHYV*IIQYLV
Trigger: GACCAAGTATTGGATGATTCATACGTAATGGACTAT...AGTGTCGGTTACCCCCAGGCTCTGGGGGCATCTGTGATCATAGAATACTGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR TCA 90 bp AGGAAACTGATTTCAAGTCCAGCTGAACAGGCCCAGGTATGGTTTGGTTTAGTTGATTTCAAGTCCAGCTaGACAGGCCCAGGTATGGTT +
Preference number: 4 (lower is better)
Translates to: RKLISSPAEQAQVWFGLVDFKSS*TGPGMV
Trigger: AACCATACCTGGGCCTGTTCAGCTGGACTTGAAATC...AACTAAACCAAACCATACCTGGGCCTGTTCAGCTGGACTTGAAATCAGTTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR TCA 90 bp TACTTGGTCGGAGAGGCACTGCATCTAAAAGGGCCTGTTTTGGTGGCTAATCGCGGGTGCAACAAATCATaGCTCATTGTGATGGATAAA +
Preference number: 4 (lower is better)
Translates to: YLVGEALHLKGPVLVANRGCNKS*LIVMDK
Trigger: TTTATCCATCACAATGAGTCATGATTTGTTGCACCC...GCGATTAGCCACCAAAACAGGCCCTTTTAGATGCAGTGCCTCTCCGACCAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR GCA 90 bp GCTGAACAGGCCCAGGTATGGTTTGGTTTAGTTTGGTTGGTGATGCAAGTAACAACCAGGGACAAAAAGTaGCTAACTGGGAATGGTGGT +
Preference number: 4 (lower is better)
Translates to: AEQAQVWFGLVWLVMQVTTRDKK*LTGNGG
Trigger: ACCACCATTCCCAGTTAGGCACTTTTTGTCCCTGGT...TGTTACTTGCATCACCAACCAAACTAAACCAAACCATACCTGGGCCTGTTCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CCA 90 bp GAACTTCTGGGGTCACCCTGTGCCTATTCCCTTTTGGTGCTGAACATGACACTTATTTTGCAAACAGGTTaGCTTTTTGCCATCAGAGGG +
Preference number: 4 (lower is better)
Translates to: ELLGSPCAYSLLVLNMTLILQTG*LFAIRG
Trigger: CCCTCTGATGGCAAAAAGCCAACCTGTTTGCAAAAT...AAGTGTCATGTTCAGCACCAAAAGGGAATAGGCACAGGGTGACCCCAGAAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR TCA 90 bp GCCAGAGTGCAGCACTGGCCTTGTGAGTTATTTTCAGGAGTTTTATCAACAAAGTGCTACTATTGGACTTaGTTGGAGAGAGGGGCATCA +
Preference number: 4 (lower is better)
Translates to: ARVQHWPCELFSGVLSTKCYYWT*LERGAS
Trigger: TGATGCCCCTCTCTCCAATCAAGTCCAATAGTAGCA...CTTTGTTGATAAAACTCCTGAAAATAACTCACAAGGCCAGTGCTGCACTCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR TCA 90 bp GCCAGAGTGCAGCACTGGCCTTGTGAGTTATTTTCAGGAGTTTTATCAACAAAGAAACGAGGTTTGCCATaGTCACACAGCTATCAGGAG +
Preference number: 4 (lower is better)
Translates to: ARVQHWPCELFSGVLSTKKRGLP*SHSYQE
Trigger: CTCCTGATAGCTGTGTGATCATGGCAAACCTCGTTT...CTTTGTTGATAAAACTCCTGAAAATAACTCACAAGGCCAGTGCTGCACTCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR GCA 90 bp GATCATAGTCCATTACGTATGAATCATCCAATACTTGGTCGGAGAGGCACTGCATCCGTCTTCACCTCATaGAGCACAGACATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: DHSPLRMNHPILGRRGTASVFTS*STDISS
Trigger: AGAAGAGATGTCTGTGCTGCATGAGGTGAAGACGGA...TGCAGTGCCTCTCCGACCAAGTATTGGATGATTCATACGTAATGGACTATGATC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR GCA 90 bp GATCATAGTCCATTACGTATGAATCATCCAATACTTGGTCGGAGAGGCACTGCAGCAAACCAAACAAGGTaGCAAACACCTTCTGGGACA +
Preference number: 4 (lower is better)
Translates to: DHSPLRMNHPILGRRGTAANQTR*QTPSGT
Trigger: TGTCCCAGAAGGTGTTTGGCACCTTGTTTGGTTTGC...TGCAGTGCCTCTCCGACCAAGTATTGGATGATTCATACGTAATGGACTATGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR GCA 90 bp TACTTGGTCGGAGAGGCACTGCATCTAAAAGGGCCTGTTTTGGTGGCTAATCGCAGGCTGTTACTAAAATaGCTGCTTTCTGGTTTGATT +
Preference number: 4 (lower is better)
Translates to: YLVGEALHLKGPVLVANRRLLLK*LLSGLI
Trigger: AATCAAACCAGAAAGCAGGCATTTTAGTAACAGCCT...GCGATTAGCCACCAAAACAGGCCCTTTTAGATGCAGTGCCTCTCCGACCAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR GCA 90 bp GCTGAACAGGCCCAGGTATGGTTTGGTTTAGTTTGGTTGGTGATGCAAGTAACATCAGGGACATTTCGGTaGAAGAACGCATTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: AEQAQVWFGLVWLVMQVTSGTFR*KNAFCK
Trigger: TTTGCAGAATGCGTTCTTGCACCGAAATGTCCCTGA...TGTTACTTGCATCACCAACCAAACTAAACCAAACCATACCTGGGCCTGTTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CCA 90 bp GCCAGAGTGCAGCACTGGCCTTGTGAGTTATTTTCAGGAGTTTTATCAACAAAGCGATGTTGGAGAAGATaGAGGTGCAGATGTACCAGA +
Preference number: 4 (lower is better)
Translates to: ARVQHWPCELFSGVLSTKRCWRR*RCRCTR
Trigger: TCTGGTACATCTGCACCTCCATCTTCTCCAACATCG...CTTTGTTGATAAAACTCCTGAAAATAACTCACAAGGCCAGTGCTGCACTCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CCA 90 bp AGGAAACTGATTTCAAGTCCAGCTGAACAGGCCCAGGTATGGTTTGGTTTAGTTAAGGGCCTGTTTTGGTaGCTAATCGCAAGTCAGTTG +
Preference number: 4 (lower is better)
Translates to: RKLISSPAEQAQVWFGLVKGLFW*LIASQL
Trigger: CAACTGACTTGCGATTAGCCACCAAAACAGGCCCTT...AACTAAACCAAACCATACCTGGGCCTGTTCAGCTGGACTTGAAATCAGTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CCA 90 bp GCCAGAGTGCAGCACTGGCCTTGTGAGTTATTTTCAGGAGTTTTATCAACAAAGGCCAGAGTGCAGCACTaGCCTTGTGAGTTATTTTCA +
Preference number: 4 (lower is better)
Translates to: ARVQHWPCELFSGVLSTKARVQH*PCELFS
Trigger: TGAAAATAACTCACAAGGCCAGTGCTGCACTCTGGC...CTTTGTTGATAAAACTCCTGAAAATAACTCACAAGGCCAGTGCTGCACTCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CCA 90 bp GATCATAGTCCATTACGTATGAATCATCCAATACTTGGTCGGAGAGGCACTGCATCTTATCACAGGGCGTaGAACTGTGCCTTTGTGGAT +
Preference number: 4 (lower is better)
Translates to: DHSPLRMNHPILGRRGTASYHRA*NCAFVD
Trigger: ATCCACAAAGGCACAGTTCCACGCCCTGTGATAAGA...TGCAGTGCCTCTCCGACCAAGTATTGGATGATTCATACGTAATGGACTATGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CCA 90 bp GAACTTCTGGGGTCACCCTGTGCCTATTCCCTTTTGGTGCTGAACATGACACTTTGTTTCTGCTCCTTTTaGGTGCAACAAATCATGACT +
Preference number: 4 (lower is better)
Translates to: ELLGSPCAYSLLVLNMTLCFCSF*VQQIMT
Trigger: AGTCATGATTTGTTGCACCCAAAAGGAGCAGAAACA...AAGTGTCATGTTCAGCACCAAAAGGGAATAGGCACAGGGTGACCCCAGAAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CCA 90 bp AAGAGGGGATATCTTATCACAGGGCGTGGAACTGTGCCTTTGTGGATGGAGGTGTCTCTAAATACAATCTaGTACCCAGACTATGACAGA +
Preference number: 4 (lower is better)
Translates to: KRGYLITGRGTVPLWMEVSLNTI*YPDYDR
Trigger: TCTGTCATAGTCTGGGTACCAGATTGTATTTAGAGA...CACCTCCATCCACAAAGGCACAGTTCCACGCCCTGTGATAAGATATCCCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR TCA 90 bp CAGGCCCAGGTATGGTTTGGTTTAGTTTGGTTGGTGATGCAAGTAACAGGAGGGGGTACACTTTCCCTCTaGAGTAGGATCAATAATTTA +
Preference number: 4 (lower is better)
Translates to: QAQVWFGLVWLVMQVTGGGTLSL*SRINNL
Trigger: TAAATTATTGATCCTACTTCAGAGGGAAAGTGTACC...CCCTCCTGTTACTTGCATCACCAACCAAACTAAACCAAACCATACCTGGGCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR TCA 90 bp GATCATAGTCCATTACGTATGAATCATCCAATACTTGGTCGGAGAGGCACTGCAGCAGCACTGGCCTTGTaGGTTATTTTCAGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: DHSPLRMNHPILGRRGTAAALAL*VIFRSF
Trigger: AAAACTCCTGAAAATAACTCACAAGGCCAGTGCTGC...TGCAGTGCCTCTCCGACCAAGTATTGGATGATTCATACGTAATGGACTATGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR GCA 90 bp AGGAAACTGATTTCAAGTCCAGCTGAACAGGCCCAGGTATGGTTTGGTTTAGTTAGCTATCAGGAGTGGTaGCAAGATATGAACCCACAT +
Preference number: 4 (lower is better)
Translates to: RKLISSPAEQAQVWFGLVSYQEW*QDMNPH
Trigger: ATGTGGGTTCATATCTTGGCACCACTCCTGATAGCT...AACTAAACCAAACCATACCTGGGCCTGTTCAGCTGGACTTGAAATCAGTTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR GCA 90 bp GCTGAACAGGCCCAGGTATGGTTTGGTTTAGTTTGGTTGGTGATGCAAGTAACAGCTGAGCACTTTACATaGACCATTTCTCTTCATCTC +
Preference number: 4 (lower is better)
Translates to: AEQAQVWFGLVWLVMQVTAEHFT*TISLHL
Trigger: GAGATGAAGAGAAATGGTGCATGTAAAGTGCTCAGC...TGTTACTTGCATCACCAACCAAACTAAACCAAACCATACCTGGGCCTGTTCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CCA 90 bp GCCAGAGTGCAGCACTGGCCTTGTGAGTTATTTTCAGGAGTTTTATCAACAAAGCAAAAAGTGCCTAACTaGGAATGGTGGTGCTTGCAA +
Preference number: 4 (lower is better)
Translates to: ARVQHWPCELFSGVLSTKQKVPN*EWWCLQ
Trigger: TTGCAAGCACCACCATTCCCAGTTAGGCACTTTTTG...CTTTGTTGATAAAACTCCTGAAAATAACTCACAAGGCCAGTGCTGCACTCTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CCA 90 bp GATCATAGTCCATTACGTATGAATCATCCAATACTTGGTCGGAGAGGCACTGCAAATACAAAATTAGCCTaGTGTGGTGACGCATGCCTG +
Preference number: 4 (lower is better)
Translates to: DHSPLRMNHPILGRRGTANTKLA*CGDACL
Trigger: CAGGCATGCGTCACCACACCAGGCTAATTTTGTATT...TGCAGTGCCTCTCCGACCAAGTATTGGATGATTCATACGTAATGGACTATGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CCA 90 bp GATCATAGTCCATTACGTATGAATCATCCAATACTTGGTCGGAGAGGCACTGCAGAACAGGCCCAGGTATaGTTTGGTTTAGTTTGGTTG +
Preference number: 4 (lower is better)
Translates to: DHSPLRMNHPILGRRGTAEQAQV*FGLVWL
Trigger: CAACCAAACTAAACCAAACCATACCTGGGCCTGTTC...TGCAGTGCCTCTCCGACCAAGTATTGGATGATTCATACGTAATGGACTATGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CCA 90 bp AGGAAACTGATTTCAAGTCCAGCTGAACAGGCCCAGGTATGGTTTGGTTTAGTTCGCATCAGACCCACGTaGGATAAATATCTGGAGATT +
Preference number: 4 (lower is better)
Translates to: RKLISSPAEQAQVWFGLVRIRPT*DKYLEI
Trigger: AATCTCCAGATATTTATCCCACGTGGGTCTGATGCG...AACTAAACCAAACCATACCTGGGCCTGTTCAGCTGGACTTGAAATCAGTTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR CAA 72 bp TTGGTCGGAGAGGCACTGCATCTAAAAGGGCCTGTTTaGGTGGCTAATCGCAAGTCAGTTGCAATATTTAAA +
Preference number: 4 (lower is better)
Translates to: LVGEALHLKGPV*VANRKSVAIFK
Trigger: TTTAAATATTGCAACTGACTTGCGATTAGCCACCAAAACAGGCCCTTTTAGATGCAGTGCCTCTCCGACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR GCA 90 bp GCTGAACAGGCCCAGGTATGGTTTGGTTTAGTTTGGTTGGTGATGCAAGTAACATGCAAGAACGCATTCTaGAAAATTACCTTGATTCAC +
Preference number: 4 (lower is better)
Translates to: AEQAQVWFGLVWLVMQVTCKNAF*KITLIH
Trigger: GTGAATCAAGGTAATTTTGCAGAATGCGTTCTTGCA...TGTTACTTGCATCACCAACCAAACTAAACCAAACCATACCTGGGCCTGTTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CCA 90 bp GCTGAACAGGCCCAGGTATGGTTTGGTTTAGTTTGGTTGGTGATGCAAGTAACATGGTTTGGTTTAGTTTaGTTGGTGATGCAAGTAACA +
Preference number: 4 (lower is better)
Translates to: AEQAQVWFGLVWLVMQVTWFGLV*LVMQVT
Trigger: TGTTACTTGCATCACCAACCAAACTAAACCAAACCA...TGTTACTTGCATCACCAACCAAACTAAACCAAACCATACCTGGGCCTGTTCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
3UTR CAA 72 bp ACATTTCGGTGCAAGAACGCATTCTGCAAAATTACCTaGATTCACCTTAAAATTCAACAGGCTGTTACTAAA +
Preference number: 4 (lower is better)
Translates to: TFRCKNAFCKIT*IHLKIQQAVTK
Trigger: TTTAGTAACAGCCTGTTGAATTTTAAGGTGAATCAAGGTAATTTTGCAGAATGCGTTCTTGCACCGAAATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS GCA 90 bp GCCCGCACCAGCGTCCCCCGCAACAACCACTCGCAGCGCTCCAGATaGTCCATGCCGGATCTCGTCAGCCACCGTCCTCCTCTCCGTGCC +
Preference number: 5 (lower is better)
Translates to: ARTSVPRNNHSQRSR*SMPDLVSHRPPLRA
Trigger: GGCACGGAGAGGAGGACGGTGGCTGACGAGATCCGGCATGGAGCATCTGGAGCGCTGCGAGTGGTTGTTGCGGGGGACGCTGGTGCGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS GCA 90 bp CCAGCGTCCCCCGCAACAACCACTCGCAGCGCTCCAGATGCTCCATaGCGGATCTCGTCAGCCACCGTCCTCCTCTCCGTGCCCTCTCGG +
Preference number: 5 (lower is better)
Translates to: PASPATTTRSAPDAP*RISSATVLLSVPSR
Trigger: CCGAGAGGGCACGGAGAGGAGGACGGTGGCTGACGAGATCCGGCATGGAGCATCTGGAGCGCTGCGAGTGGTTGTTGCGGGGGACGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS GCA 90 bp AGATGGAGGTGCAGATGTACCAGATGGCCGTGCCCACAAGCAGGGTaGTCAGCCGCCGCAGGACCAAGCCAGCCTTGCCGGTCAGATGGT +
Preference number: 5 (lower is better)
Translates to: RWRCRCTRWPCPQAG*SAAAGPSQPCRSDG
Trigger: ACCATCTGACCGGCAAGGCTGGCTTGGTCCTGCGGCGGCTGAGCACCCTGCTTGTGGGCACGGCCATCTGGTACATCTGCACCTCCATCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS GCA 90 bp GTTCGATGTTGGAGAAGATGGAGGTGCAGATGTACCAGATGGCCGTaGCCACAAGCAGGGTGCTCAGCCGCCGCAGGACCAAGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: VRCWRRWRCRCTRWP*PQAGCSAAAGPSQP
Trigger: AGGCTGGCTTGGTCCTGCGGCGGCTGAGCACCCTGCTTGTGGGCACGGCCATCTGGTACATCTGCACCTCCATCTTCTCCAACATCGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS CCA 90 bp ATGCCCAGGGCCACAACCAGGGTGGTGATGGCGGTGTGGAGGCAGTaGCTTCGGTCCGTCTTCACCTCATGCAGCACAGACATCTCTTCT +
Preference number: 5 (lower is better)
Translates to: MPRATTRVVMAVWRQ*LRSVFTSCSTDISS
Trigger: AGAAGAGATGTCTGTGCTGCATGAGGTGAAGACGGACCGAAGCCACTGCCTCCACACCGCCATCACCACCCTGGTTGTGGCCCTGGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS CCA 90 bp AAAGTCAGAATGCCCAGGGCCACAACCAGGGTGGTGATGGCGGTGTaGAGGCAGTGGCTTCGGTCCGTCTTCACCTCATGCAGCACAGAC +
Preference number: 5 (lower is better)
Translates to: KVRMPRATTRVVMAV*RQWLRSVFTSCSTD
Trigger: GTCTGTGCTGCATGAGGTGAAGACGGACCGAAGCCACTGCCTCCACACCGCCATCACCACCCTGGTTGTGGCCCTGGGCATTCTGACTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CAA 90 bp CCAACGCCTCCAAAGCACCATGGTGCCACCTCCCATATCTCATCACCTGTGTTTGCCGAGATCGGGCCATaGCACCCCAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: PTPPKHHGATSHISSPVFAEIGP*HPSLGN
Trigger: GTTGCCCAGGCTGGGGTGCAATGGCCCGATCTCGGC...AAACACAGGTGATGAGATATGGGAGGTGGCACCATGGTGCTTTGGAGGCGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS GCA 90 bp GGTAGCAGCTGCCCGTGTAGTGTTCGATGTTGGAGAAGATGGAGGTaGAGATGTACCAGATGGCCGTGCCCACAAGCAGGGTGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: GSSCPCSVRCWRRWR*RCTRWPCPQAGCSA
Trigger: GGCTGAGCACCCTGCTTGTGGGCACGGCCATCTGGTACATCTGCACCTCCATCTTCTCCAACATCGAACACTACACGGGCAGCTGCTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS CCA 90 bp TGTAGTGTTCGATGTTGGAGAAGATGGAGGTGCAGATGTACCAGATaGCCGTGCCCACAAGCAGGGTGCTCAGCCGCCGCAGGACCAAGC +
Preference number: 5 (lower is better)
Translates to: CSVRCWRRWRCRCTR*PCPQAGCSAAAGPS
Trigger: GCTTGGTCCTGCGGCGGCTGAGCACCCTGCTTGTGGGCACGGCCATCTGGTACATCTGCACCTCCATCTTCTCCAACATCGAACACTACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS CCA 90 bp GGGACTGGTAGCAGCTGCCCGTGTAGTGTTCGATGTTGGAGAAGATaGAGGTGCAGATGTACCAGATGGCCGTGCCCACAAGCAGGGTGC +
Preference number: 5 (lower is better)
Translates to: GTGSSCPCSVRCWRR*RCRCTRWPCPQAGC
Trigger: GCACCCTGCTTGTGGGCACGGCCATCTGGTACATCTGCACCTCCATCTTCTCCAACATCGAACACTACACGGGCAGCTGCTACCAGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS CCA 90 bp CCAGGGCTGGGGACTGGTAGCAGCTGCCCGTGTAGTGTTCGATGTTaGAGAAGATGGAGGTGCAGATGTACCAGATGGCCGTGCCCACAA +
Preference number: 5 (lower is better)
Translates to: PGLGTGSSCPCSVRC*RRWRCRCTRWPCPQ
Trigger: TTGTGGGCACGGCCATCTGGTACATCTGCACCTCCATCTTCTCCAACATCGAACACTACACGGGCAGCTGCTACCAGTCCCCAGCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS CCA 90 bp GCACTGCTGCTTGCTCTGGTGTTCCTTTCTGACCCCCTCCAGGGCTaGGGACTGGTAGCAGCTGCCCGTGTAGTGTTCGATGTTGGAGAA +
Preference number: 5 (lower is better)
Translates to: ALLLALVFLSDPLQG*GLVAAARVVFDVGE
Trigger: TTCTCCAACATCGAACACTACACGGGCAGCTGCTACCAGTCCCCAGCCCTGGAGGGGGTCAGAAAGGAACACCAGAGCAAGCAGCAGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CAA 90 bp CCAACGCCTCCAAAGCACCATGGTGCCACCTCCCATATCTCATCACCTGTGTTTAACGGGGACAACTCCTaGAGGAGGGAGCCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: PTPPKHHGATSHISSPVFNGDNS*RREPAS
Trigger: GCTGGCGGGCTCCCTCCTCAAGGAGTTGTCCCCGTT...AAACACAGGTGATGAGATATGGGAGGTGGCACCATGGTGCTTTGGAGGCGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS GCA 90 bp GTGATGGCGGTGTGGAGGCAGTGGCTTCGGTCCGTCTTCACCTCATaGAGCACAGACATCTCTTCTACAATCATGAGGGCGCAGAAGGTC +
Preference number: 5 (lower is better)
Translates to: VMAVWRQWLRSVFTS*STDISSTIMRAQKV
Trigger: GACCTTCTGCGCCCTCATGATTGTAGAAGAGATGTCTGTGCTGCATGAGGTGAAGACGGACCGAAGCCACTGCCTCCACACCGCCATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CAA 90 bp TACCAACGCCTCCAAAGCACCATGGTGCCACCTCCCATATCTCATCACCTGTGTCAGGCCCAGGCCACTTaGACAAAATACACGTTGAGG +
Preference number: 5 (lower is better)
Translates to: YQRLQSTMVPPPISHHLCQAQAT*TKYTLR
Trigger: CCTCAACGTGTATTTTGTCAAAGTGGCCTGGGCCTG...ACACAGGTGATGAGATATGGGAGGTGGCACCATGGTGCTTTGGAGGCGTTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CAA 90 bp TACTTGGTCGGAGAGGCACTGCATCTAAAAGGGCCTGTTTTGGTGGCTAATCGCCCTGATTCTGCCCTTTaGCTGAGCCTTAGGTCCCCA +
Preference number: 5 (lower is better)
Translates to: YLVGEALHLKGPVLVANRPDSAL*LSLRSP
Trigger: TGGGGACCTAAGGCTCAGCAAAAGGGCAGAATCAGG...GCGATTAGCCACCAAAACAGGCCCTTTTAGATGCAGTGCCTCTCCGACCAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS TCA 90 bp GGTCCGTCTTCACCTCATGCAGCACAGACATCTCTTCTACAATCATaGGGGCGCAGAAGGTCAGCAGGAAGGAGTGACCTGAGATGTCAA +
Preference number: 5 (lower is better)
Translates to: GPSSPHAAQTSLLQS*GRRRSAGRSDLRCQ
Trigger: TTGACATCTCAGGTCACTCCTTCCTGCTGACCTTCTGCGCCCTCATGATTGTAGAAGAGATGTCTGTGCTGCATGAGGTGAAGACGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CAA 90 bp CCATGGCCACTCCCACCACTGGTTTATGGGCATAGGCAACAGAGGGTCACATCTTTGACAAAATACACGTaGAGGACGTTGCGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: PWPLPPLVYGHRQQRVTSLTKYT*RTLRLL
Trigger: CAACAAGCGCAACGTCCTCAACGTGTATTTTGTCAA...AGATGTGACCCTCTGTTGCCTATGCCCATAAACCAGTGGTGGGAGTGGCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CAA 90 bp GCTGAACAGGCCCAGGTATGGTTTGGTTTAGTTTGGTTGGTGATGCAAGTAACACGTGGAACTGTGCCTTaGTGGATGGAGGTGACAGGA +
Preference number: 5 (lower is better)
Translates to: AEQAQVWFGLVWLVMQVTRGTVP*WMEVTG
Trigger: TCCTGTCACCTCCATCCACAAAGGCACAGTTCCACG...TGTTACTTGCATCACCAACCAAACTAAACCAAACCATACCTGGGCCTGTTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CAA 90 bp CCATGGCCACTCCCACCACTGGTTTATGGGCATAGGCAACAGAGGGTCACATCTCAGTTAATGCTACTATaGGACTTGATTGGAGAGAGG +
Preference number: 5 (lower is better)
Translates to: PWPLPPLVYGHRQQRVTSQLMLL*DLIGER
Trigger: CCTCTCTCCAATCAAGTCCAATAGTAGCATTAACTG...AGATGTGACCCTCTGTTGCCTATGCCCATAAACCAGTGGTGGGAGTGGCCATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CAA 90 bp TACCAACGCCTCCAAAGCACCATGGTGCCACCTCCCATATCTCATCACCTGTGTGTGTTTCTGCTCCTTTaGGGTGCAACAAATCATGAC +
Preference number: 5 (lower is better)
Translates to: YQRLQSTMVPPPISHHLCVFLLL*GATNHD
Trigger: GTCATGATTTGTTGCACCCAAAAGGAGCAGAAACAC...ACACAGGTGATGAGATATGGGAGGTGGCACCATGGTGCTTTGGAGGCGTTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CAA 90 bp ATGGCAGTATTCTATGATCACAGATGCCCCCAGAGCCTGGGGGTAACCGACACTCAGAAGGCTCTGCAATaGACACTTTCCACATACAGT +
Preference number: 5 (lower is better)
Translates to: MAVFYDHRCPQSLGVTDTQKALQ*TLSTYS
Trigger: ACTGTATGTGGAAAGTGTCAATTGCAGAGCCTTCTG...AGTGTCGGTTACCCCCAGGCTCTGGGGGCATCTGTGATCATAGAATACTGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CAA 90 bp GATCATAGTCCATTACGTATGAATCATCCAATACTTGGTCGGAGAGGCACTGCATGGTGGCACTGCTGCTaGCTCTGGTGTTCCTTTCTG +
Preference number: 5 (lower is better)
Translates to: DHSPLRMNHPILGRRGTAWWHCC*LWCSFL
Trigger: CAGAAAGGAACACCAGAGCAAGCAGCAGTGCCACCA...TGCAGTGCCTCTCCGACCAAGTATTGGATGATTCATACGTAATGGACTATGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CAA 90 bp TACCAACGCCTCCAAAGCACCATGGTGCCACCTCCCATATCTCATCACCTGTGTTCAATAAGGGTGATTTaGCAAACAGGTTGGCTTTTT +
Preference number: 5 (lower is better)
Translates to: YQRLQSTMVPPPISHHLCSIRVI*QTGWLF
Trigger: AAAAAGCCAACCTGTTTGCAAAATCACCCTTATTGA...ACACAGGTGATGAGATATGGGAGGTGGCACCATGGTGCTTTGGAGGCGTTGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CAA 90 bp GCTGAACAGGCCCAGGTATGGTTTGGTTTAGTTTGGTTGGTGATGCAAGTAACAATGCTACTATTGGACTaGATTGGAGAGAGGGGCATC +
Preference number: 5 (lower is better)
Translates to: AEQAQVWFGLVWLVMQVTMLLLD*IGERGI
Trigger: GATGCCCCTCTCTCCAATCAAGTCCAATAGTAGCAT...TGTTACTTGCATCACCAACCAAACTAAACCAAACCATACCTGGGCCTGTTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CAA 90 bp GATCATAGTCCATTACGTATGAATCATCCAATACTTGGTCGGAGAGGCACTGCACTAAAAGGGCCTGTTTaGGTGGCTAATCGCAAGTCA +
Preference number: 5 (lower is better)
Translates to: DHSPLRMNHPILGRRGTALKGPV*VANRKS
Trigger: TGACTTGCGATTAGCCACCAAAACAGGCCCTTTTAG...TGCAGTGCCTCTCCGACCAAGTATTGGATGATTCATACGTAATGGACTATGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS-3UTR CAA 90 bp AGGAAACTGATTTCAAGTCCAGCTGAACAGGCCCAGGTATGGTTTGGTTTAGTTACATCTCATGTTTGCTaGAGCCCAAATCCTTTCACT +
Preference number: 5 (lower is better)
Translates to: RKLISSPAEQAQVWFGLVTSHVC*SPNPFT
Trigger: AGTGAAAGGATTTGGGCTCAAGCAAACATGAGATGT...AACTAAACCAAACCATACCTGGGCCTGTTCAGCTGGACTTGAAATCAGTTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS GCA 72 bp TGCAGATGTACCAGATGGCCGTGCCCACAAGCAGGGTaGTCAGCCGCCGCAGGACCAAGCCAGCCTTGCCGG +
Preference number: 6 (lower is better)
Translates to: CRCTRWPCPQAG*SAAAGPSQPCR
Trigger: CCGGCAAGGCTGGCTTGGTCCTGCGGCGGCTGAGCACCCTGCTTGTGGGCACGGCCATCTGGTACATCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS GCA 72 bp CCCGCAACAACCACTCGCAGCGCTCCAGATGCTCCATaGCGGATCTCGTCAGCCACCGTCCTCCTCTCCGTG +
Preference number: 6 (lower is better)
Translates to: PATTTRSAPDAP*RISSATVLLSV
Trigger: CACGGAGAGGAGGACGGTGGCTGACGAGATCCGGCATGGAGCATCTGGAGCGCTGCGAGTGGTTGTTGCGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS GCA 72 bp AGCGTCCCCCGCAACAACCACTCGCAGCGCTCCAGATaGTCCATGCCGGATCTCGTCAGCCACCGTCCTCCT +
Preference number: 6 (lower is better)
Translates to: SVPRNNHSQRSR*SMPDLVSHRPP
Trigger: AGGAGGACGGTGGCTGACGAGATCCGGCATGGAGCATCTGGAGCGCTGCGAGTGGTTGTTGCGGGGGACGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS CCA 72 bp GCCACAACCAGGGTGGTGATGGCGGTGTGGAGGCAGTaGCTTCGGTCCGTCTTCACCTCATGCAGCACAGAC +
Preference number: 6 (lower is better)
Translates to: ATTRVVMAVWRQ*LRSVFTSCSTD
Trigger: GTCTGTGCTGCATGAGGTGAAGACGGACCGAAGCCACTGCCTCCACACCGCCATCACCACCCTGGTTGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS CCA 72 bp CGATGTTGGAGAAGATGGAGGTGCAGATGTACCAGATaGCCGTGCCCACAAGCAGGGTGCTCAGCCGCCGCA +
Preference number: 6 (lower is better)
Translates to: RCWRRWRCRCTR*PCPQAGCSAAA
Trigger: TGCGGCGGCTGAGCACCCTGCTTGTGGGCACGGCCATCTGGTACATCTGCACCTCCATCTTCTCCAACATCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS CCA 72 bp CTTGCTCTGGTGTTCCTTTCTGACCCCCTCCAGGGCTaGGGACTGGTAGCAGCTGCCCGTGTAGTGTTCGAT +
Preference number: 6 (lower is better)
Translates to: LALVFLSDPLQG*GLVAAARVVFD
Trigger: ATCGAACACTACACGGGCAGCTGCTACCAGTCCCCAGCCCTGGAGGGGGTCAGAAAGGAACACCAGAGCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS GCA 72 bp GTGTGGAGGCAGTGGCTTCGGTCCGTCTTCACCTCATaGAGCACAGACATCTCTTCTACAATCATGAGGGCG +
Preference number: 6 (lower is better)
Translates to: VWRQWLRSVFTS*STDISSTIMRA
Trigger: CGCCCTCATGATTGTAGAAGAGATGTCTGTGCTGCATGAGGTGAAGACGGACCGAAGCCACTGCCTCCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4
CDS CCA 72 bp AGCAGCTGCCCGTGTAGTGTTCGATGTTGGAGAAGATaGAGGTGCAGATGTACCAGATGGCCGTGCCCACAA +
Preference number: 6 (lower is better)
Translates to: SSCPCSVRCWRR*RCRCTRWPCPQ
Trigger: TTGTGGGCACGGCCATCTGGTACATCTGCACCTCCATCTTCTCCAACATCGAACACTACACGGGCAGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396825.4