Pregenerated sensors for FITM1 (Homo sapiens)
Ensembl gene IDs: ENSG00000139914Ensembl transcript IDs: ENST00000267426.6, ENST00000559294.1, ENST00000642380.1, ENST00000644407.1
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGGAGACGGTGTAGCCTCGCCACTGGTGGCCGGCTGCCAGGCAGCTaGGGCGGTCAGGCAGCTCGTGGAGCAGCAGACCCTGGGGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: RRRCSLATGGRLPGS*GGQAARGAADPGAV Trigger: CACTGCCCCAGGGTCTGCTGCTCCACGAGCTGCCTGACCGCCGCAGCTGCCTGGCAGCCGGCCACCAGTGGCGAGGCTACACCGTCTCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000267426.6 ENST00000559294.1 ENST00000642380.1 ENST00000644407.1 |
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| CDS GCA 90 bp | GAAGGTGTGGGAGGAGACGGTGTAGCCTCGCCACTGGTGGCCGGCTaGCAGGCAGCTGCGGCGGTCAGGCAGCTCGTGGAGCAGCAGACC | + |
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Preference number: 5 (lower is better) Translates to: EGVGGDGVASPLVAG*QAAAAVRQLVEQQT Trigger: GGTCTGCTGCTCCACGAGCTGCCTGACCGCCGCAGCTGCCTGGCAGCCGGCCACCAGTGGCGAGGCTACACCGTCTCCTCCCACACCTTC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000267426.6 ENST00000559294.1 ENST00000642380.1 ENST00000644407.1 |
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| CDS CCA 90 bp | GCCAGGCAGCTGCGGCGGTCAGGCAGCTCGTGGAGCAGCAGACCCTaGGGCAGTGGCTCGAAGCAGGAGCCAGTCAGGTCCTCGATGAGC | + |
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Preference number: 5 (lower is better) Translates to: ARQLRRSGSSWSSRP*GSGSKQEPVRSSMS Trigger: GCTCATCGAGGACCTGACTGGCTCCTGCTTCGAGCCACTGCCCCAGGGTCTGCTGCTCCACGAGCTGCCTGACCGCCGCAGCTGCCTGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000267426.6 ENST00000559294.1 ENST00000642380.1 ENST00000644407.1 |
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| CDS GCA 90 bp | GTCCTCGATGAGCAGGAAGGCCCGGCCGGCTCCCCGCCACACGGCTaGCCCTACTACCAGTCGGCTCAGGTGTCTGGCAGTTACTGCCAC | + |
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Preference number: 5 (lower is better) Translates to: VLDEQEGPAGSPPHG*PYYQSAQVSGSYCH Trigger: GTGGCAGTAACTGCCAGACACCTGAGCCGACTGGTAGTAGGGGCAGCCGTGTGGCGGGGAGCCGGCCGGGCCTTCCTGCTCATCGAGGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000267426.6 ENST00000559294.1 ENST00000642380.1 ENST00000644407.1 |
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| CDS CCA 90 bp | GCTGCGGCGGTCAGGCAGCTCGTGGAGCAGCAGACCCTGGGGCAGTaGCTCGAAGCAGGAGCCAGTCAGGTCCTCGATGAGCAGGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: AAAVRQLVEQQTLGQ*LEAGASQVLDEQEG Trigger: GCCTTCCTGCTCATCGAGGACCTGACTGGCTCCTGCTTCGAGCCACTGCCCCAGGGTCTGCTGCTCCACGAGCTGCCTGACCGCCGCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000267426.6 ENST00000559294.1 ENST00000642380.1 ENST00000644407.1 |
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| CDS TCA 90 bp | CGCTTCCAAAGTACAGCAAGGCAGAGGCCACCCAGAGCAGCACCTTaGGCAGGCAGCCCAGCAGTGCCTGGATTCGGGCCCCGGCCCCCA | + |
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Preference number: 5 (lower is better) Translates to: RFQSTARQRPPRAAP*AGSPAVPGFGPRPP Trigger: TGGGGGCCGGGGCCCGAATCCAGGCACTGCTGGGCTGCCTGCTCAAGGTGCTGCTCTGGGTGGCCTCTGCCTTGCTGTACTTTGGAAGCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000267426.6 ENST00000644407.1 |
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| CDS CCA 90 bp | CCAGAGGCCCAGCAGCAGCACGTTCAGCAGGAAGACAAGGCGCAGTaGGGCGCCGGCAGGAAGCCCATGGGCCAGGTACTTGGCGAACAC | + |
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Preference number: 5 (lower is better) Translates to: PEAQQQHVQQEDKAQ*GAGRKPMGQVLGEH Trigger: GTGTTCGCCAAGTACCTGGCCCATGGGCTTCCTGCCGGCGCCCCACTGCGCCTTGTCTTCCTGCTGAACGTGCTGCTGCTGGGCCTCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000267426.6 ENST00000559294.1 ENST00000642380.1 ENST00000644407.1 |
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| CDS GCA 90 bp | CCACTGCTGCCAGCCAGGCATGGTAGAGGCGCCGTAAGCAGGGGCTaGCCAGAAGGCGGGCGGCCTGTTCGCTTCCAAAGTACAGCAAGG | + |
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Preference number: 5 (lower is better) Translates to: PLLPARHGRGAVSRG*PEGGRPVRFQSTAR Trigger: CCTTGCTGTACTTTGGAAGCGAACAGGCCGCCCGCCTTCTGGGCAGCCCCTGCTTACGGCGCCTCTACCATGCCTGGCTGGCAGCAGTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000267426.6 ENST00000644407.1 |
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| CDS TCA 90 bp | CTGGGCTCCCTGGAGACCAGGGCTGATGATACCAGCTGCCATAGGTaGGGTACCAGGCAAAGGTGCCCACTGCGGCGCCCACCACCTTGT | + |
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Preference number: 5 (lower is better) Translates to: LGSLETRADDTSCHR*GTRQRCPLRRPPPC Trigger: ACAAGGTGGTGGGCGCCGCAGTGGGCACCTTTGCCTGGTACCTCACCTATGGCAGCTGGTATCATCAGCCCTGGTCTCCAGGGAGCCCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000267426.6 ENST00000559294.1 ENST00000642380.1 ENST00000644407.1 |
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| CDS CCA 90 bp | GTTATGCTTGCGGCTGGAGTGGGGACGGGGGAAGAGCCCATGGCCTaGGCTCCCTGGAGACCAGGGCTGATGATACCAGCTGCCATAGGT | + |
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Preference number: 5 (lower is better) Translates to: VMLAAGVGTGEEPMA*APWRPGLMIPAAIG Trigger: ACCTATGGCAGCTGGTATCATCAGCCCTGGTCTCCAGGGAGCCCAGGCCATGGGCTCTTCCCCCGTCCCCACTCCAGCCGCAAGCATAAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000267426.6 ENST00000559294.1 ENST00000642380.1 ENST00000644407.1 |
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| CDS GCA 90 bp | CACGGCTGCCCCTACTACCAGTCGGCTCAGGTGTCTGGCAGTTACTaGCACGCGCCGTGTAGCCAGGAACACCACCAGCAACACAAAGCC | + |
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Preference number: 5 (lower is better) Translates to: HGCPYYQSAQVSGSY*HAPCSQEHHQQHKA Trigger: GGCTTTGTGTTGCTGGTGGTGTTCCTGGCTACACGGCGCGTGGCAGTAACTGCCAGACACCTGAGCCGACTGGTAGTAGGGGCAGCCGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000267426.6 ENST00000559294.1 ENST00000642380.1 ENST00000644407.1 |
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| CDS GCA 90 bp | GGCGCCGGCAGGAAGCCCATGGGCCAGGTACTTGGCGAACACAGCTaGTTCCTCTGCCATGAGCAGGCAGCAAAAGGTGAGCAGGAAGGT | + |
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Preference number: 5 (lower is better) Translates to: GAGRKPMGQVLGEHS*FLCHEQAAKGEQEG Trigger: ACCTTCCTGCTCACCTTTTGCTGCCTGCTCATGGCAGAGGAAGCAGCTGTGTTCGCCAAGTACCTGGCCCATGGGCTTCCTGCCGGCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000267426.6 ENST00000559294.1 ENST00000642380.1 ENST00000644407.1 |
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| CDS CCA 90 bp | GGCAGTAAGGGGCCAGGGTGGAGGTCTGCCACGTCAGCAGGGTCCTaGCCTCGGGTGTGTGGTAGTATGTGTCCTGACAGCAGTCTGTGT | + |
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Preference number: 5 (lower is better) Translates to: GSKGPGWRSATSAGS*PRVCGSMCPDSSLC Trigger: ACACAGACTGCTGTCAGGACACATACTACCACACACCCGAGGCCAGGACCCTGCTGACGTGGCAGACCTCCACCCTGGCCCCTTACTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000267426.6 ENST00000644407.1 |
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| CDS GCA 90 bp | CCCTTCTCCTGGGGTTCTGAGCACAAGAGCCCACCAACAGCAGGATaGAGCAAGGTGGCTGTGCACAGCACTGTGGCCATCATAGGCCTT | + |
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Preference number: 5 (lower is better) Translates to: PFSWGSEHKSPPTAG*SKVAVHSTVAIIGL Trigger: AAGGCCTATGATGGCCACAGTGCTGTGCACAGCCACCTTGCTGCATCCTGCTGTTGGTGGGCTCTTGTGCTCAGAACCCCAGGAGAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000267426.6 |
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| CDS GCA 90 bp | AGGAAGCCCATGGGCCAGGTACTTGGCGAACACAGCTGCTTCCTCTaGCATGAGCAGGCAGCAAAAGGTGAGCAGGAAGGTGTGGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: RKPMGQVLGEHSCFL*HEQAAKGEQEGVGG Trigger: TCCTCCCACACCTTCCTGCTCACCTTTTGCTGCCTGCTCATGGCAGAGGAAGCAGCTGTGTTCGCCAAGTACCTGGCCCATGGGCTTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000267426.6 ENST00000559294.1 ENST00000642380.1 ENST00000644407.1 |
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| CDS TCA 90 bp | CCACTGCGGCGCCCACCACCTTGTGAGTGTACTGGTGGAAATAGATaGCGGTACAGAGCAGCAAGAAGTTCCAGAGGCCCAGCAGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: PLRRPPPCECTGGNR*RYRAARSSRGPAAA Trigger: TGCTGCTGCTGGGCCTCTGGAACTTCTTGCTGCTCTGTACCGTCATCTATTTCCACCAGTACACTCACAAGGTGGTGGGCGCCGCAGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000267426.6 ENST00000559294.1 ENST00000642380.1 ENST00000644407.1 |
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| CDS TCA 90 bp | CCTGTTAGTCCTGTGTCCTTGGCTCCGACCATGTTCCAGTTCCTGTaGCAGGGCCAGCTGTTCAGGGCTGTCCTTGTCCATAGTCTGCCA | + |
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Preference number: 5 (lower is better) Translates to: PVSPVSLAPTMFQFL*QGQLFRAVLVHSLP Trigger: TGGCAGACTATGGACAAGGACAGCCCTGAACAGCTGGCCCTGTCACAGGAACTGGAACATGGTCGGAGCCAAGGACACAGGACTAACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000267426.6 |
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| CDS TCA 90 bp | AGCTGCCAGTCTTATCAGTGTGATCTAGCCCTTCTCCTGGGGTTCTaGGCACAAGAGCCCACCAACAGCAGGATGCAGCAAGGTGGCTGT | + |
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Preference number: 5 (lower is better) Translates to: SCQSYQCDLALLLGF*AQEPTNSRMQQGGC Trigger: ACAGCCACCTTGCTGCATCCTGCTGTTGGTGGGCTCTTGTGCTCAGAACCCCAGGAGAAGGGCTAGATCACACTGATAAGACTGGCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000267426.6 |
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| CDS GCA 90 bp | TCCTGTGACAGGGCCAGCTGTTCAGGGCTGTCCTTGTCCATAGTCTaGCAAAGTCCCTCTCCACCCACCCCTACTTTACCATTTGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: SCDRASCSGLSLSIV*QSPSPPTPTLPFAP Trigger: TGGAGCAAATGGTAAAGTAGGGGTGGGTGGAGAGGGACTTTGGCAGACTATGGACAAGGACAGCCCTGAACAGCTGGCCCTGTCACAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000267426.6 |
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| CDS GCA 90 bp | ATGATACCAGCTGCCATAGGTGAGGTACCAGGCAAAGGTGCCCACTaGGGCGCCCACCACCTTGTGAGTGTACTGGTGGAAATAGATGAC | + |
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Preference number: 5 (lower is better) Translates to: MIPAAIGEVPGKGAH*GAHHLVSVLVEIDD Trigger: GTCATCTATTTCCACCAGTACACTCACAAGGTGGTGGGCGCCGCAGTGGGCACCTTTGCCTGGTACCTCACCTATGGCAGCTGGTATCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000267426.6 ENST00000559294.1 ENST00000642380.1 ENST00000644407.1 |
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| CDS CCA 90 bp | TGTCCTGACAGCAGTCTGTGTCCTTTCCTGTTAGTCCTGTGTCCTTaGCTCCGACCATGTTCCAGTTCCTGTGACAGGGCCAGCTGTTCA | + |
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Preference number: 5 (lower is better) Translates to: CPDSSLCPFLLVLCP*LRPCSSSCDRASCS Trigger: TGAACAGCTGGCCCTGTCACAGGAACTGGAACATGGTCGGAGCCAAGGACACAGGACTAACAGGAAAGGACACAGACTGCTGTCAGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000267426.6 |
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| CDS GCA 90 bp | CACTGCACTCTCCCCAACCCTACACATCATCACTCGTTCTCTCCTTaGCGTGCCCTTTACAGCCCCCAGTCATTTAACCTTTGCTATCTC | + |
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Preference number: 5 (lower is better) Translates to: HCTLPNPTHHHSFSP*RALYSPQSFNLCYL Trigger: GAGATAGCAAAGGTTAAATGACTGGGGGCTGTAAAGGGCACGGCAAGGAGAGAACGAGTGATGATGTGTAGGGTTGGGGAGAGTGCAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000559294.1 ENST00000642380.1 |
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| CDS GCA 90 bp | CATAGTCTGCCAAAGTCCCTCTCCACCCACCCCTACTTTACCATTTaGTCCACAGGGAAATCAGAGGTCATGGAGATAAAAATAACCAAA | + |
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Preference number: 5 (lower is better) Translates to: HSLPKSLSTHPYFTI*STGKSEVMEIKITK Trigger: TTTGGTTATTTTTATCTCCATGACCTCTGATTTCCCTGTGGAGCAAATGGTAAAGTAGGGGTGGGTGGAGAGGGACTTTGGCAGACTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000267426.6 |
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| CDS GCA 72 bp | GGAGGAGACGGTGTAGCCTCGCCACTGGTGGCCGGCTaGCAGGCAGCTGCGGCGGTCAGGCAGCTCGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: GGDGVASPLVAG*QAAAAVRQLVE Trigger: CTCCACGAGCTGCCTGACCGCCGCAGCTGCCTGGCAGCCGGCCACCAGTGGCGAGGCTACACCGTCTCCTCC 72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000267426.6 ENST00000559294.1 ENST00000642380.1 ENST00000644407.1 |
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| CDS GCA 72 bp | GAGCAGGAAGGCCCGGCCGGCTCCCCGCCACACGGCTaGCCCTACTACCAGTCGGCTCAGGTGTCTGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: EQEGPAGSPPHG*PYYQSAQVSGS Trigger: ACTGCCAGACACCTGAGCCGACTGGTAGTAGGGGCAGCCGTGTGGCGGGGAGCCGGCCGGGCCTTCCTGCTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000267426.6 ENST00000559294.1 ENST00000642380.1 ENST00000644407.1 |
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| CDS GCA 72 bp | TGTAGCCTCGCCACTGGTGGCCGGCTGCCAGGCAGCTaGGGCGGTCAGGCAGCTCGTGGAGCAGCAGACCCT | + |
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Preference number: 6 (lower is better) Translates to: CSLATGGRLPGS*GGQAARGAADP Trigger: AGGGTCTGCTGCTCCACGAGCTGCCTGACCGCCGCAGCTGCCTGGCAGCCGGCCACCAGTGGCGAGGCTACA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000267426.6 ENST00000559294.1 ENST00000642380.1 ENST00000644407.1 |
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| CDS CCA 72 bp | CTGCGGCGGTCAGGCAGCTCGTGGAGCAGCAGACCCTaGGGCAGTGGCTCGAAGCAGGAGCCAGTCAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: LRRSGSSWSSRP*GSGSKQEPVRS Trigger: GGACCTGACTGGCTCCTGCTTCGAGCCACTGCCCCAGGGTCTGCTGCTCCACGAGCTGCCTGACCGCCGCAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000267426.6 ENST00000559294.1 ENST00000642380.1 ENST00000644407.1 |
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| CDS CCA 72 bp | GGGCCAGGGTGGAGGTCTGCCACGTCAGCAGGGTCCTaGCCTCGGGTGTGTGGTAGTATGTGTCCTGACAGC | + |
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Preference number: 6 (lower is better) Translates to: GPGWRSATSAGS*PRVCGSMCPDS Trigger: GCTGTCAGGACACATACTACCACACACCCGAGGCCAGGACCCTGCTGACGTGGCAGACCTCCACCCTGGCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000267426.6 ENST00000644407.1 |
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| CDS CCA 72 bp | GTCAGGCAGCTCGTGGAGCAGCAGACCCTGGGGCAGTaGCTCGAAGCAGGAGCCAGTCAGGTCCTCGATGAG | + |
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Preference number: 6 (lower is better) Translates to: VRQLVEQQTLGQ*LEAGASQVLDE Trigger: CTCATCGAGGACCTGACTGGCTCCTGCTTCGAGCCACTGCCCCAGGGTCTGCTGCTCCACGAGCTGCCTGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000267426.6 ENST00000559294.1 ENST00000642380.1 ENST00000644407.1 |
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| CDS CCA 72 bp | CAGCAGCAGCACGTTCAGCAGGAAGACAAGGCGCAGTaGGGCGCCGGCAGGAAGCCCATGGGCCAGGTACTT | + |
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Preference number: 6 (lower is better) Translates to: QQQHVQQEDKAQ*GAGRKPMGQVL Trigger: AAGTACCTGGCCCATGGGCTTCCTGCCGGCGCCCCACTGCGCCTTGTCTTCCTGCTGAACGTGCTGCTGCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000267426.6 ENST00000559294.1 ENST00000642380.1 ENST00000644407.1 |
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| CDS CCA 72 bp | AAGACAAGGCGCAGTGGGGCGCCGGCAGGAAGCCCATaGGCCAGGTACTTGGCGAACACAGCTGCTTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: KTRRSGAPAGSP*ARYLANTAASS Trigger: AGAGGAAGCAGCTGTGTTCGCCAAGTACCTGGCCCATGGGCTTCCTGCCGGCGCCCCACTGCGCCTTGTCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000267426.6 ENST00000559294.1 ENST00000642380.1 ENST00000644407.1 |
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| CDS TCA 72 bp | CTGGAGACCAGGGCTGATGATACCAGCTGCCATAGGTaGGGTACCAGGCAAAGGTGCCCACTGCGGCGCCCA | + |
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Preference number: 6 (lower is better) Translates to: LETRADDTSCHR*GTRQRCPLRRP Trigger: TGGGCGCCGCAGTGGGCACCTTTGCCTGGTACCTCACCTATGGCAGCTGGTATCATCAGCCCTGGTCTCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000267426.6 ENST00000559294.1 ENST00000642380.1 ENST00000644407.1 |
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| CDS GCA 72 bp | CCCTACTACCAGTCGGCTCAGGTGTCTGGCAGTTACTaGCACGCGCCGTGTAGCCAGGAACACCACCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: PYYQSAQVSGSY*HAPCSQEHHQQ Trigger: TTGCTGGTGGTGTTCCTGGCTACACGGCGCGTGGCAGTAACTGCCAGACACCTGAGCCGACTGGTAGTAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000267426.6 ENST00000559294.1 ENST00000642380.1 ENST00000644407.1 |
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| CDS GCA 72 bp | GCTGCCATAGGTGAGGTACCAGGCAAAGGTGCCCACTaGGGCGCCCACCACCTTGTGAGTGTACTGGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: AAIGEVPGKGAH*GAHHLVSVLVE Trigger: TTCCACCAGTACACTCACAAGGTGGTGGGCGCCGCAGTGGGCACCTTTGCCTGGTACCTCACCTATGGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000267426.6 ENST00000559294.1 ENST00000642380.1 ENST00000644407.1 |
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| CDS TCA 72 bp | CCTGTGTCCTTGGCTCCGACCATGTTCCAGTTCCTGTaGCAGGGCCAGCTGTTCAGGGCTGTCCTTGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: PVSLAPTMFQFL*QGQLFRAVLVH Trigger: ATGGACAAGGACAGCCCTGAACAGCTGGCCCTGTCACAGGAACTGGAACATGGTCGGAGCCAAGGACACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000267426.6 |
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| CDS GCA 72 bp | TGGCTGGCGAAGATAGTCCGAGGGTTGACATGGAACTaGAGAAGCGGCCCAAAGATGACCACTGCTGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: WLAKIVRGLTWN*RSGPKMTTAAS Trigger: GCTGGCAGCAGTGGTCATCTTTGGGCCGCTTCTGCAGTTCCATGTCAACCCTCGGACTATCTTCGCCAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000267426.6 ENST00000644407.1 |
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| CDS GCA 72 bp | AGGAAGCCCATGGGCCAGGTACTTGGCGAACACAGCTaGTTCCTCTGCCATGAGCAGGCAGCAAAAGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: RKPMGQVLGEHS*FLCHEQAAKGE Trigger: CTCACCTTTTGCTGCCTGCTCATGGCAGAGGAAGCAGCTGTGTTCGCCAAGTACCTGGCCCATGGGCTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000267426.6 ENST00000559294.1 ENST00000642380.1 ENST00000644407.1 |
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| CDS CAA 72 bp | AGTTCCTGTGACAGGGCCAGCTGTTCAGGGCTGTCCTaGTCCATAGTCTGCCAAAGTCCCTCTCCACCCACC | + |
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Preference number: 6 (lower is better) Translates to: SSCDRASCSGLS*SIVCQSPSPPT Trigger: GGTGGGTGGAGAGGGACTTTGGCAGACTATGGACAAGGACAGCCCTGAACAGCTGGCCCTGTCACAGGAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000267426.6 |
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| CDS GCA 72 bp | AGGGCCAGCTGTTCAGGGCTGTCCTTGTCCATAGTCTaGCAAAGTCCCTCTCCACCCACCCCTACTTTACCA | + |
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Preference number: 6 (lower is better) Translates to: RASCSGLSLSIV*QSPSPPTPTLP Trigger: TGGTAAAGTAGGGGTGGGTGGAGAGGGACTTTGGCAGACTATGGACAAGGACAGCCCTGAACAGCTGGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000267426.6 |
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| CDS GCA 72 bp | ATGGGCCAGGTACTTGGCGAACACAGCTGCTTCCTCTaGCATGAGCAGGCAGCAAAAGGTGAGCAGGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: MGQVLGEHSCFL*HEQAAKGEQEG Trigger: ACCTTCCTGCTCACCTTTTGCTGCCTGCTCATGGCAGAGGAAGCAGCTGTGTTCGCCAAGTACCTGGCCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000267426.6 ENST00000559294.1 ENST00000642380.1 ENST00000644407.1 |
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| CDS CCA 72 bp | TTGCCGTGGCTGGCGAAGATAGTCCGAGGGTTGACATaGAACTGCAGAAGCGGCCCAAAGATGACCACTGCT | + |
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Preference number: 6 (lower is better) Translates to: LPWLAKIVRGLT*NCRSGPKMTTA Trigger: AGCAGTGGTCATCTTTGGGCCGCTTCTGCAGTTCCATGTCAACCCTCGGACTATCTTCGCCAGCCACGGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000267426.6 ENST00000644407.1 |
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| CDS CAA 90 bp | CCATGTTCCAGTTCCTGTGACAGGGCCAGCTGTTCAGGGCTGTCCTaGTCCATAGTCTGCCAAAGTCCCTCTCCACCCACCCCTACTTTA | + |
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Preference number: 6 (lower is better) Translates to: PCSSSCDRASCSGLS*SIVCQSPSPPTPTL Trigger: TAAAGTAGGGGTGGGTGGAGAGGGACTTTGGCAGACTATGGACAAGGACAGCCCTGAACAGCTGGCCCTGTCACAGGAACTGGAACATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000267426.6 |
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| CDS CCA 72 bp | AGCAGTCTGTGTCCTTTCCTGTTAGTCCTGTGTCCTTaGCTCCGACCATGTTCCAGTTCCTGTGACAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: SSLCPFLLVLCP*LRPCSSSCDRA Trigger: GGCCCTGTCACAGGAACTGGAACATGGTCGGAGCCAAGGACACAGGACTAACAGGAAAGGACACAGACTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000267426.6 |
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| CDS CAA 72 bp | AAGAAGTTGCCGTGGCTGGCGAAGATAGTCCGAGGGTaGACATGGAACTGCAGAAGCGGCCCAAAGATGACC | + |
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Preference number: 6 (lower is better) Translates to: KKLPWLAKIVRG*TWNCRSGPKMT Trigger: GGTCATCTTTGGGCCGCTTCTGCAGTTCCATGTCAACCCTCGGACTATCTTCGCCAGCCACGGCAACTTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000267426.6 ENST00000644407.1 |
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| CDS TCA 72 bp | CGCCCACCACCTTGTGAGTGTACTGGTGGAAATAGATaGCGGTACAGAGCAGCAAGAAGTTCCAGAGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: RPPPCECTGGNR*RYRAARSSRGP Trigger: TGGGCCTCTGGAACTTCTTGCTGCTCTGTACCGTCATCTATTTCCACCAGTACACTCACAAGGTGGTGGGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000267426.6 ENST00000559294.1 ENST00000642380.1 ENST00000644407.1 |
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| CDS CAA 90 bp | TTTATGTTGAAGAAGTTGCCGTGGCTGGCGAAGATAGTCCGAGGGTaGACATGGAACTGCAGAAGCGGCCCAAAGATGACCACTGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: FMLKKLPWLAKIVRG*TWNCRSGPKMTTAA Trigger: GGCAGCAGTGGTCATCTTTGGGCCGCTTCTGCAGTTCCATGTCAACCCTCGGACTATCTTCGCCAGCCACGGCAACTTCTTCAACATAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000267426.6 ENST00000644407.1 |
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| CDS GCA 72 bp | CTCCCCAACCCTACACATCATCACTCGTTCTCTCCTTaGCGTGCCCTTTACAGCCCCCAGTCATTTAACCTT | + |
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Preference number: 6 (lower is better) Translates to: LPNPTHHHSFSP*RALYSPQSFNL Trigger: AAGGTTAAATGACTGGGGGCTGTAAAGGGCACGGCAAGGAGAGAACGAGTGATGATGTGTAGGGTTGGGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000559294.1 ENST00000642380.1 |
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| CDS CAA 72 bp | GCCCAGGGCTGCTGTATAAACTGGCGGTTTCATCTGTaGATCACGTTGACCCTCAGATCCCTAAAGATTAGG | + |
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Preference number: 6 (lower is better) Translates to: AQGCCINWRFHL*ITLTLRSLKIR Trigger: CCTAATCTTTAGGGATCTGAGGGTCAACGTGATCAACAGATGAAACCGCCAGTTTATACAGCAGCCCTGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000267426.6 |
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| CDS CAA 72 bp | GCCAAAGTCCCTCTCCACCCACCCCTACTTTACCATTaGCTCCACAGGGAAATCAGAGGTCATGGAGATAAA | + |
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Preference number: 6 (lower is better) Translates to: AKVPLHPPLLYH*LHREIRGHGDK Trigger: TTTATCTCCATGACCTCTGATTTCCCTGTGGAGCAAATGGTAAAGTAGGGGTGGGTGGAGAGGGACTTTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000267426.6 |
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| CDS GCA 72 bp | CCAAAGTCCCTCTCCACCCACCCCTACTTTACCATTTaGTCCACAGGGAAATCAGAGGTCATGGAGATAAAA | + |
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Preference number: 6 (lower is better) Translates to: PKSLSTHPYFTI*STGKSEVMEIK Trigger: TTTTATCTCCATGACCTCTGATTTCCCTGTGGAGCAAATGGTAAAGTAGGGGTGGGTGGAGAGGGACTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000267426.6 |
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| CDS CAA 90 bp | ACTAGTTTGGCCCAGGGCTGCTGTATAAACTGGCGGTTTCATCTGTaGATCACGTTGACCCTCAGATCCCTAAAGATTAGGTTTACTCCC | + |
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Preference number: 6 (lower is better) Translates to: TSLAQGCCINWRFHL*ITLTLRSLKIRFTP Trigger: GGGAGTAAACCTAATCTTTAGGGATCTGAGGGTCAACGTGATCAACAGATGAAACCGCCAGTTTATACAGCAGCCCTGGGCCAAACTAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000267426.6 |
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| CDS CCA 72 bp | GCTGAATTCACAAATTTTATGTTGAAGAAGTTGCCGTaGCTGGCGAAGATAGTCCGAGGGTTGACATGGAAC | + |
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Preference number: 6 (lower is better) Translates to: AEFTNFMLKKLP*LAKIVRGLTWN Trigger: GTTCCATGTCAACCCTCGGACTATCTTCGCCAGCCACGGCAACTTCTTCAACATAAAATTTGTGAATTCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000267426.6 ENST00000644407.1 |
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| CDS CAA 72 bp | TGCTGTATAAACTGGCGGTTTCATCTGTTGATCACGTaGACCCTCAGATCCCTAAAGATTAGGTTTACTCCC | + |
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Preference number: 6 (lower is better) Translates to: CCINWRFHLLIT*TLRSLKIRFTP Trigger: GGGAGTAAACCTAATCTTTAGGGATCTGAGGGTCAACGTGATCAACAGATGAAACCGCCAGTTTATACAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000267426.6 |
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