RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FILIP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000118407

Ensembl transcript IDs: ENST00000237172.12, ENST00000370020.1, ENST00000393004.6, ENST00000498523.1

Found 530 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGTGTGGGCTTCTAAAGCTGAGCACAACCTGTGAACTAGAGAAATaGGCCAGCAGTCCTCCTTGTGTGGCTTTTAGTTATCCTTGTGAC +
Preference number: 1 (lower is better)
Translates to: VCGLLKLSTTCELEK*ASSPPCVAFSYPCD
Trigger: GTCACAAGGATAACTAAAAGCCACACAAGGAGGACTGCTGGCCCATTTCTCTAGTTCACAGGTTGTGCTCAGCTTTAGAAGCCCACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
3UTR TCA 90 bp AAAACTTCACATTGCCTGATACACCACTTATTCTTGCTCTGCCACTaGTTTGTAGTAGCTGTGTATTACTGCAGTAGCGCTGTTGTCTCT +
Preference number: 1 (lower is better)
Translates to: KTSHCLIHHLFLLCH*FVVAVYYCSSAVVS
Trigger: AGAGACAACAGCGCTACTGCAGTAATACACAGCTACTACAAATCAGTGGCAGAGCAAGAATAAGTGGTGTATCAGGCAATGTGAAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
3UTR-3UTR TCA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCACTGGCACAAACAGATaGAGGTTCACTTTCACGGCA +
Preference number: 2 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSTGTNR*RFTFTA
Trigger: TGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCAGT...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
3UTR-3UTR TCA 90 bp CTATTGATGGGTCCACTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGACTGGCACAAACAGATaGAGGTTCACTTTCACGGCA +
Preference number: 2 (lower is better)
Translates to: LLMGPLARSKTGTRNHALTGTNR*RFTFTA
Trigger: TGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCAGT...CAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAGTGGACCCATCAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
3UTR-3UTR GCA 90 bp AAATTTGGCTTGCAATTAGGAAATATGGGAGCCGGACTTGAAGAGCGTGTGATTGGCAGCAGTAGCATCTaGACAACATACCCCCTTAGC +
Preference number: 2 (lower is better)
Translates to: KFGLQLGNMGAGLEERVIGSSSI*TTYPLS
Trigger: GCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCC...AATCACACGCTCTTCAAGTCCGGCTCCCATATTTCCTAATTGCAAGCCAAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
3UTR-3UTR CCA 90 bp TTGCCTGATACACCACTTATTCTTGCTCTGCCACTGATTTGTAGTAGCTGTGTATCCAGAGACTCAGTTTaGATGCCCGTGTGTGGGCTT +
Preference number: 2 (lower is better)
Translates to: LPDTPLILALPLICSSCVSRDSV*MPVCGL
Trigger: AAGCCCACACACGGGCATCCAAACTGAGTCTCTGGA...TACACAGCTACTACAAATCAGTGGCAGAGCAAGAATAAGTGGTGTATCAGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
3UTR-3UTR TCA 90 bp TGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGTCAAAAAGCTGAGCACAACCTGTaGACTAGAGAAATGGGCCAG +
Preference number: 2 (lower is better)
Translates to: CHQRYKHWQIGYLTVSQKAEHNL*TREMGQ
Trigger: CTGGCCCATTTCTCTAGTTCACAGGTTGTGCTCAGC...TTTTTGACTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
3UTR-3UTR CCA 90 bp TGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGTCAAAAAACAGTGACACAATCATaGCTCCCTGCAGCCTCCATC +
Preference number: 2 (lower is better)
Translates to: CHQRYKHWQIGYLTVSQKTVTQS*LPAASI
Trigger: GATGGAGGCTGCAGGGAGCCATGATTGTGTCACTGT...TTTTTGACTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000393004.6
3UTR-3UTR CCA 90 bp ATAATTTTGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGTTGGATGCCCGTGTGTaGGCTTCTAAAGCTGAGCAC +
Preference number: 2 (lower is better)
Translates to: IILPSEVQTLANRILNCELDARV*ASKAEH
Trigger: GTGCTCAGCTTTAGAAGCCCACACACGGGCATCCAA...CTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCAAAATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
3UTR-3UTR TCA 90 bp TTAATTTTTCTATTCCAGAGACTCAGTTTGGATGCCCGTGTGTGGGCTTCTAAATCTGACGTTGAGATTTaGGTAATGCACGTTGTGCTT +
Preference number: 2 (lower is better)
Translates to: LIFLFQRLSLDARVWASKSDVEI*VMHVVL
Trigger: AAGCACAACGTGCATTACTCAAATCTCAACGTCAGA...TTTAGAAGCCCACACACGGGCATCCAAACTGAGTCTCTGGAATAGAAAAATTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
3UTR-3UTR CCA 90 bp TTGCCTGATACACCACTTATTCTTGCTCTGCCACTGATTTGTAGTAGCTGTGTAGACTTAATCATAGCATaGACAGAAAAGGCTCACCAT +
Preference number: 2 (lower is better)
Translates to: LPDTPLILALPLICSSCVDLIIA*TEKAHH
Trigger: ATGGTGAGCCTTTTCTGTCCATGCTATGATTAAGTC...TACACAGCTACTACAAATCAGTGGCAGAGCAAGAATAAGTGGTGTATCAGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
3UTR-3UTR TCA 90 bp TTGCCTGATACACCACTTATTCTTGCTCTGCCACTGATTTGTAGTAGCTGTGTAAATCAGAAGTATAATTaGACTGTCAGTCGAAGCTGT +
Preference number: 2 (lower is better)
Translates to: LPDTPLILALPLICSSCVNQKYN*TVSRSC
Trigger: ACAGCTTCGACTGACAGTTCAATTATACTTCTGATT...TACACAGCTACTACAAATCAGTGGCAGAGCAAGAATAAGTGGTGTATCAGGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
3UTR-3UTR CCA 90 bp AATGTATCACGTTATGGCATCGATAAACATTTCTGTTCAAATGTGTGGATCTACTGTGAACTAGAGAAATaGGCCAGCAGTCCTCCTTGT +
Preference number: 2 (lower is better)
Translates to: NVSRYGIDKHFCSNVWIYCELEK*ASSPPC
Trigger: ACAAGGAGGACTGCTGGCCCATTTCTCTAGTTCACA...GTAGATCCACACATTTGAACAGAAATGTTTATCGATGCCATAACGTGATACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
3UTR-3UTR GCA 90 bp AATGTATCACGTTATGGCATCGATAAACATTTCTGTTCAAATGTGTGGATCTACAAAGAAGGGGAAATATaGTTCAGGTGCCAGTTGCGT +
Preference number: 2 (lower is better)
Translates to: NVSRYGIDKHFCSNVWIYKEGEI*FRCQLR
Trigger: ACGCAACTGGCACCTGAAGCATATTTCCCCTTCTTT...GTAGATCCACACATTTGAACAGAAATGTTTATCGATGCCATAACGTGATACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
3UTR-3UTR CCA 90 bp AATGTATCACGTTATGGCATCGATAAACATTTCTGTTCAAATGTGTGGATCTACGCAGTCCTCCTTGTGTaGCTTTTAGTTATCCTTGTG +
Preference number: 2 (lower is better)
Translates to: NVSRYGIDKHFCSNVWIYAVLLV*LLVILV
Trigger: CACAAGGATAACTAAAAGCCACACAAGGAGGACTGC...GTAGATCCACACATTTGAACAGAAATGTTTATCGATGCCATAACGTGATACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
3UTR-3UTR CCA 90 bp TGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGTCAAAAATCTTATTGCCCTTACTaGTTAAACTGGTACATCTCC +
Preference number: 2 (lower is better)
Translates to: CHQRYKHWQIGYLTVSQKSYCPY*LNWYIS
Trigger: GGAGATGTACCAGTTTAACCAGTAAGGGCAATAAGA...TTTTTGACTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
3UTR-3UTR CCA 90 bp TGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGTCAAAAACCTTACTGGTTAAACTaGTACATCTCCTTTTATGAA +
Preference number: 2 (lower is better)
Translates to: CHQRYKHWQIGYLTVSQKPYWLN*YISFYE
Trigger: TTCATAAAAGGAGATGTACCAGTTTAACCAGTAAGG...TTTTTGACTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393004.6
3UTR-3UTR CCA 90 bp AATGTATCACGTTATGGCATCGATAAACATTTCTGTTCAAATGTGTGGATCTACCAGAGGTACAAACATTaGCAAATAGGATACTTAACT +
Preference number: 2 (lower is better)
Translates to: NVSRYGIDKHFCSNVWIYQRYKH*QIGYLT
Trigger: AGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTG...GTAGATCCACACATTTGAACAGAAATGTTTATCGATGCCATAACGTGATACATT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
3UTR TCA 72 bp GCCCGTGTGTGGGCTTCTAAAGCTGAGCACAACCTGTaGACTAGAGAAATGGGCCAGCAGTCCTCCTTGTGT +
Preference number: 3 (lower is better)
Translates to: ARVWASKAEHNL*TREMGQQSSLC
Trigger: ACACAAGGAGGACTGCTGGCCCATTTCTCTAGTTCACAGGTTGTGCTCAGCTTTAGAAGCCCACACACGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
3UTR-3UTR CAA 90 bp CTATTGATGGGTCCACTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGCAGCAAGCAATAGTTTaGCTAATTTTGTTCCCCAGC +
Preference number: 3 (lower is better)
Translates to: LLMGPLARSKTGTRNHALQQAIV*LILFPS
Trigger: GCTGGGGAACAAAATTAGCAAAACTATTGCTTGCTG...CAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAGTGGACCCATCAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
3UTR CCA 72 bp CTTCTAAAGCTGAGCACAACCTGTGAACTAGAGAAATaGGCCAGCAGTCCTCCTTGTGTGGCTTTTAGTTAT +
Preference number: 3 (lower is better)
Translates to: LLKLSTTCELEK*ASSPPCVAFSY
Trigger: ATAACTAAAAGCCACACAAGGAGGACTGCTGGCCCATTTCTCTAGTTCACAGGTTGTGCTCAGCTTTAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
3UTR TCA 72 bp CATTGCCTGATACACCACTTATTCTTGCTCTGCCACTaGTTTGTAGTAGCTGTGTATTACTGCAGTAGCGCT +
Preference number: 3 (lower is better)
Translates to: HCLIHHLFLLCH*FVVAVYYCSSA
Trigger: AGCGCTACTGCAGTAATACACAGCTACTACAAATCAGTGGCAGAGCAAGAATAAGTGGTGTATCAGGCAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
3UTR-3UTR CAA 90 bp TGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGTCAAAAAAAGACTCTCACTGTGTaGCCCAGGCTGATCCTGAAC +
Preference number: 3 (lower is better)
Translates to: CHQRYKHWQIGYLTVSQKKTLTV*PRLILN
Trigger: GTTCAGGATCAGCCTGGGCAACACAGTGAGAGTCTT...TTTTTGACTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCA
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000393004.6
3UTR-3UTR CAA 90 bp AATGTATCACGTTATGGCATCGATAAACATTTCTGTTCAAATGTGTGGATCTACTTCCAGAGACTCAGTTaGGATGCCCGTGTGTGGGCT +
Preference number: 3 (lower is better)
Translates to: NVSRYGIDKHFCSNVWIYFQRLS*DARVWA
Trigger: AGCCCACACACGGGCATCCAAACTGAGTCTCTGGAA...GTAGATCCACACATTTGAACAGAAATGTTTATCGATGCCATAACGTGATACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
3UTR-3UTR CAA 90 bp ATAATTTTGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGTTTCATCCAAGGTTTTaGGCCCAGAACACCAGAAAG +
Preference number: 3 (lower is better)
Translates to: IILPSEVQTLANRILNCEFHPRF*AQNTRK
Trigger: CTTTCTGGTGTTCTGGGCCAAAAACCTTGGATGAAA...CTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCAAAATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393004.6
3UTR-3UTR CAA 90 bp AATGTATCACGTTATGGCATCGATAAACATTTCTGTTCAAATGTGTGGATCTACCATGTTGAAAATGATTaGCCAATTCCCCAAGGTGTA +
Preference number: 3 (lower is better)
Translates to: NVSRYGIDKHFCSNVWIYHVEND*PIPQGV
Trigger: TACACCTTGGGGAATTGGCAAATCATTTTCAACATG...GTAGATCCACACATTTGAACAGAAATGTTTATCGATGCCATAACGTGATACATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393004.6
3UTR-3UTR CAA 90 bp AATGTATCACGTTATGGCATCGATAAACATTTCTGTTCAAATGTGTGGATCTACCTTTTGGCACATAGATaGAATTGCTCTTGCTACATA +
Preference number: 3 (lower is better)
Translates to: NVSRYGIDKHFCSNVWIYLLAHR*NCSCYI
Trigger: TATGTAGCAAGAGCAATTCAATCTATGTGCCAAAAG...GTAGATCCACACATTTGAACAGAAATGTTTATCGATGCCATAACGTGATACATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR GCA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCTCCTGCTCCTGGGGCTaGCACTACTGGCTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: FTFTAAVASAQHTPLATASCSWG*HYWLSC
Trigger: GCAGGAAAGCCAGTAGTGGCAGCCCCAGGAGCAGGA...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCCCCCTCCGAGAGAGGTaGTGCTGCTGGCTGCAGATT +
Preference number: 4 (lower is better)
Translates to: FTFTAAVASAQHTPLATAPLRER*CCWLQI
Trigger: AATCTGCAGCCAGCAGCACCACCTCTCTCGGAGGGG...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCCTGGCCCTGCTTTGGTaGAAGGACTACCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: FTFTAAVASAQHTPLATALALLW*KDYLSW
Trigger: CCAGGAGAGGTAGTCCTTTCACCAAAGCAGGGCCAG...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCCTGCTGCTTCACCGCTaGCTGCATCAGTTTGGACTC +
Preference number: 4 (lower is better)
Translates to: FTFTAAVASAQHTPLATALLLHR*LHQFGL
Trigger: GAGTCCAAACTGATGCAGTCAGCGGTGAAGCAGCAG...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp CTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGCTTCTAGGCAGCAAGCCCTTTCTCCTGAGTaGTGGAGGGGCCGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: LARSKTGTRNHALASRQQALSPE*WRGRFP
Trigger: GGGAAAACGGCCCCTCCATCACTCAGGAGAAAGGGC...TTGCTGCCTAGAAGCCAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp CTATTGATGGGTCCACTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGGCCGTGAGGAGAGGTaGTTCCTGGGAGAGCGAAGG +
Preference number: 4 (lower is better)
Translates to: LLMGPLARSKTGTRNHALGREER*FLGERR
Trigger: CCTTCGCTCTCCCAGGAATCACCTCTCCTCACGGCC...CAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAGTGGACCCATCAATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp TGGCACAAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACAGGCCGTGAGGAGAGGTaGTTCCTGGGAGAGCGAAGG +
Preference number: 4 (lower is better)
Translates to: WHKQMKVHFHGSSSICTTGREER*FLGERR
Trigger: CCTTCGCTCTCCCAGGAATCACCTCTCCTCACGGCC...TGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCGGATGTGGGCCTGTCTaGAAATGCGCCTCTTCCACT +
Preference number: 4 (lower is better)
Translates to: FTFTAAVASAQHTPLATAGCGPV*KCASST
Trigger: AGTGGAAGAGGCGCATTTGCAGACAGGCCCACATCC...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCGTGGGTGTAGGCCGCTaGGATGACCCGTCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSVGVGR*DDPSCP
Trigger: AGGACAAGACGGGTCATCCCAGCGGCCTACACCCAC...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp CTATTGATGGGTCCACTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGCACCAGCATTGCCGATaGTGGAGGGCTTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: LLMGPLARSKTGTRNHALHQHCR*WRAWDR
Trigger: CCTGTCCCAAGCCCTCCATCATCGGCAATGCTGGTG...CAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAGTGGACCCATCAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237172.12
CDS-3UTR TCA 90 bp AAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCGCCCTTTCTCCTGAGTaGTGGAGGGGCCGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: KQMKVHFHGSSSICTTYPALSPE*WRGRFP
Trigger: GGGAAAACGGCCCCTCCATCACTCAGGAGAAAGGGC...GGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCAACCTCTCCCGCTCCTaGTCCAGCAGGTTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSNLSRS*SSRLVK
Trigger: CTTCACCAACCTGCTGGAGCAGGAGCGGGAGAGGTT...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCGGATTCGGGAGAAACTaGAATCTCAGCTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: FTFTAAVASAQHTPLATAGFGRN*NLSWCC
Trigger: GCAGCACCAGCTGAGATTGCAGTTTCTCCCGAATCC...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp AAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCTCCTGCTCCTGGGGCTaGCACTACTGGCTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: KQMKVHFHGSSSICTTYPSCSWG*HYWLSC
Trigger: GCAGGAAAGCCAGTAGTGGCAGCCCCAGGAGCAGGA...GGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCCCGCAGCACTTTCTCTaGCTCCGCAGACCCGTAATG +
Preference number: 4 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSPQHFL*LRRPVM
Trigger: CATTACGGGTCTGCGGAGCCAGAGAAAGTGCTGCGG...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp CTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGCTTCTAGGCAGCAACCGCAGCACTTTCTCTaGCTCCGCAGACCCGTAATG +
Preference number: 4 (lower is better)
Translates to: LARSKTGTRNHALASRQQPQHFL*LRRPVM
Trigger: CATTACGGGTCTGCGGAGCCAGAGAAAGTGCTGCGG...TTGCTGCCTAGAAGCCAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp CTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGCTTCTAGGCAGCAATCTCCTGGGCAAGAATaGCATCTCGGTGCAGGACCC +
Preference number: 4 (lower is better)
Translates to: LARSKTGTRNHALASRQQSPGQE*HLGAGP
Trigger: GGGTCCTGCACCGAGATGCCATTCTTGCCCAGGAGA...TTGCTGCCTAGAAGCCAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp CTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGCTTCTAGGCAGCAACTGGGTGCCCTGGACTaGAATTTGTTCGGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: LARSKTGTRNHALASRQQLGALD*NLFGAL
Trigger: AAGGGCCCCGAACAAATTCCAGTCCAGGGCACCCAG...TTGCTGCCTAGAAGCCAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp CTATTGATGGGTCCACTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGCCCCTCCGAGAGAGGTaGTGCTGCTGGCTGCAGATT +
Preference number: 4 (lower is better)
Translates to: LLMGPLARSKTGTRNHALPLRER*CCWLQI
Trigger: AATCTGCAGCCAGCAGCACCACCTCTCTCGGAGGGG...CAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAGTGGACCCATCAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCTATCTTCCGGGCAGGTaGGCTCAGACCCTTTTCGTG +
Preference number: 4 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSYLPGR*AQTLFV
Trigger: CACGAAAAGGGTCTGAGCTCACCTGCCCGGAAGATA...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCACTCTTTGGTCAGATTaGGAACCTCCTGCCCCATGT +
Preference number: 4 (lower is better)
Translates to: FTFTAAVASAQHTPLATATLWSD*EPPAPC
Trigger: ACATGGGGCAGGAGGTTCTCAATCTGACCAAAGAGT...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp CTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGCTTCTAGGCAGCAACTGCTGCTTCACCGCTaGCTGCATCAGTTTGGACTC +
Preference number: 4 (lower is better)
Translates to: LARSKTGTRNHALASRQQLLLHR*LHQFGL
Trigger: GAGTCCAAACTGATGCAGTCAGCGGTGAAGCAGCAG...TTGCTGCCTAGAAGCCAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp CTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGCTTCTAGGCAGCAAAGAATGGCATCTCGGTaGAGGACCCGCAGCACTTTC +
Preference number: 4 (lower is better)
Translates to: LARSKTGTRNHALASRQQRMASR*RTRSTF
Trigger: GAAAGTGCTGCGGGTCCTGCACCGAGATGCCATTCT...TTGCTGCCTAGAAGCCAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp CTATTGATGGGTCCACTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGAACCTCTCCCGCTCCTaGTCCAGCAGGTTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: LLMGPLARSKTGTRNHALNLSRS*SSRLVK
Trigger: CTTCACCAACCTGCTGGAGCAGGAGCGGGAGAGGTT...CAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAGTGGACCCATCAATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCTGCTTCACCGCTGACTaGATCAGTTTGGACTCCAGT +
Preference number: 4 (lower is better)
Translates to: FTFTAAVASAQHTPLATACFTAD*ISLDSS
Trigger: ACTGGAGTCCAAACTGATGCAGTCAGCGGTGAAGCA...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCTGGCGTTTCTTCCTCTaGTGCTTCACCGCTGACTGC +
Preference number: 4 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSWRFFL*CFTADC
Trigger: GCAGTCAGCGGTGAAGCAGCAGAGGAAGAAACGCCA...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp TGGCACAAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATGCAGGGGCTGGCCCTaGTTTGGTGAAAGGACTACC +
Preference number: 4 (lower is better)
Translates to: WHKQMKVHFHGSSSICTTCRGWP*FGERTT
Trigger: GGTAGTCCTTTCACCAAAGCAGGGCCAGCCCCTGCA...TGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp CTATTGATGGGTCCACTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGTGCAGGGGCTGGCCCTaGTTTGGTGAAAGGACTACC +
Preference number: 4 (lower is better)
Translates to: LLMGPLARSKTGTRNHALCRGWP*FGERTT
Trigger: GGTAGTCCTTTCACCAAAGCAGGGCCAGCCCCTGCA...CAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAGTGGACCCATCAATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCGGTGTCACTCGAATATaGAGGGGCTGGCCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSGVTRI*RGWPCF
Trigger: AAAGCAGGGCCAGCCCCTGCATATTCGAGTGACACC...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp CTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGCTTCTAGGCAGCAAGGTGTCACTCGAATATaGAGGGGCTGGCCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: LARSKTGTRNHALASRQQGVTRI*RGWPCF
Trigger: AAAGCAGGGCCAGCCCCTGCATATTCGAGTGACACC...TTGCTGCCTAGAAGCCAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp CTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGCTTCTAGGCAGCAAGGATGTGGGCCTGTCTaGAAATGCGCCTCTTCCACT +
Preference number: 4 (lower is better)
Translates to: LARSKTGTRNHALASRQQGCGPV*KCASST
Trigger: AGTGGAAGAGGCGCATTTGCAGACAGGCCCACATCC...TTGCTGCCTAGAAGCCAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCCTCCGAGAGAGGTGGTaGTGCTGGCTGCAGATTTCT +
Preference number: 4 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSLRERW*CWLQIS
Trigger: AGAAATCTGCAGCCAGCAGCACCACCTCTCTCGGAG...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp TGGCACAAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATCTCCTGGGCAAGAATaGCATCTCGGTGCAGGACCC +
Preference number: 4 (lower is better)
Translates to: WHKQMKVHFHGSSSICTTSPGQE*HLGAGP
Trigger: GGGTCCTGCACCGAGATGCCATTCTTGCCCAGGAGA...TGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp TGGAGGACCTTAGTCATGATTGAGGGCTGTCCATTCAATAGGGATTCAGAGGTCTCTCCTGGGCAAGAATaGCATCTCGGTGCAGGACCC +
Preference number: 4 (lower is better)
Translates to: WRTLVMIEGCPFNRDSEVSPGQE*HLGAGP
Trigger: GGGTCCTGCACCGAGATGCCATTCTTGCCCAGGAGA...GACCTCTGAATCCCTATTGAATGGACAGCCCTCAATCATGACTAAGGTCCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCCCTATGGATTTCTCCTaGGCAAGAATGGCATCTCGG +
Preference number: 4 (lower is better)
Translates to: FTFTAAVASAQHTPLATAPMDFS*ARMASR
Trigger: CCGAGATGCCATTCTTGCCCAGGAGAAATCCATAGG...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp CTATTGATGGGTCCACTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGCTGGGTGCCCTGGACTaGAATTTGTTCGGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: LLMGPLARSKTGTRNHALLGALD*NLFGAL
Trigger: AAGGGCCCCGAACAAATTCCAGTCCAGGGCACCCAG...CAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAGTGGACCCATCAATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCGCAGTGCTGTTCTCGTaGTCTGGTGTCACTCGAATA +
Preference number: 4 (lower is better)
Translates to: FTFTAAVASAQHTPLATAAVLFS*SGVTRI
Trigger: TATTCGAGTGACACCAGACCACGAGAACAGCACTGC...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp CTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGCTTCTAGGCAGCAAGAAGGACAGTGCCGGTaGAAACCTCCTTTTCGGCTG +
Preference number: 4 (lower is better)
Translates to: LARSKTGTRNHALASRQQEGQCR*KPPFRL
Trigger: CAGCCGAAAAGGAGGTTTCCACCGGCACTGTCCTTC...TTGCTGCCTAGAAGCCAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCGAAGGACAGTGCCGGTaGAAACCTCCTTTTCGGCTG +
Preference number: 4 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSEGQCR*KPPFRL
Trigger: CAGCCGAAAAGGAGGTTTCCACCGGCACTGTCCTTC...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp AAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCTATACGGTGCGCCTATaGCACTTCTCGGCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: KQMKVHFHGSSSICTTYPYTVRL*HFSASN
Trigger: GTTGCTGGCCGAGAAGTGTCATAGGCGCACCGTATA...GGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp CTATTGATGGGTCCACTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGTATACGGTGCGCCTATaGCACTTCTCGGCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: LLMGPLARSKTGTRNHALYTVRL*HFSASN
Trigger: GTTGCTGGCCGAGAAGTGTCATAGGCGCACCGTATA...CAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAGTGGACCCATCAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp TGGAGGACCTTAGTCATGATTGAGGGCTGTCCATTCAATAGGGATTCAGAGGTCGCTCCAGCAGGTTGGTaGAGTCGTCGCTCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: WRTLVMIEGCPFNRDSEVAPAGW*SRRSCS
Trigger: TGAACAAGAGCGACGACTTCACCAACCTGCTGGAGC...GACCTCTGAATCCCTATTGAATGGACAGCCCTCAATCATGACTAAGGTCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR TCA 90 bp CTATTGATGGGTCCACTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGTATCTTCCGGGCAGGTaGGCTCAGACCCTTTTCGTG +
Preference number: 4 (lower is better)
Translates to: LLMGPLARSKTGTRNHALYLPGR*AQTLFV
Trigger: CACGAAAAGGGTCTGAGCTCACCTGCCCGGAAGATA...CAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAGTGGACCCATCAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp TGGAGGACCTTAGTCATGATTGAGGGCTGTCCATTCAATAGGGATTCAGAGGTCTATCTTCCGGGCAGGTaGGCTCAGACCCTTTTCGTG +
Preference number: 4 (lower is better)
Translates to: WRTLVMIEGCPFNRDSEVYLPGR*AQTLFV
Trigger: CACGAAAAGGGTCTGAGCTCACCTGCCCGGAAGATA...GACCTCTGAATCCCTATTGAATGGACAGCCCTCAATCATGACTAAGGTCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR TCA 90 bp TTGCCTGATACACCACTTATTCTTGCTCTGCCACTGATTTGTAGTAGCTGTGTAGGCCGTGAGGAGAGGTaGTTCCTGGGAGAGCGAAGG +
Preference number: 4 (lower is better)
Translates to: LPDTPLILALPLICSSCVGREER*FLGERR
Trigger: CCTTCGCTCTCCCAGGAATCACCTCTCCTCACGGCC...TACACAGCTACTACAAATCAGTGGCAGAGCAAGAATAAGTGGTGTATCAGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR TCA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCACTGGCACAAACAGATaGAGGTTCACTTTCACGGCA +
Preference number: 4 (lower is better)
Translates to: FTFTAAVASAQHTPLATATGTNR*RFTFTA
Trigger: TGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCAGT...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp AAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCAGAATGGCATCTCGGTaGAGGACCCGCAGCACTTTC +
Preference number: 4 (lower is better)
Translates to: KQMKVHFHGSSSICTTYPRMASR*RTRSTF
Trigger: GAAAGTGCTGCGGGTCCTGCACCGAGATGCCATTCT...GGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp TGGAGGACCTTAGTCATGATTGAGGGCTGTCCATTCAATAGGGATTCAGAGGTCAGAATGGCATCTCGGTaGAGGACCCGCAGCACTTTC +
Preference number: 4 (lower is better)
Translates to: WRTLVMIEGCPFNRDSEVRMASR*RTRSTF
Trigger: GAAAGTGCTGCGGGTCCTGCACCGAGATGCCATTCT...GACCTCTGAATCCCTATTGAATGGACAGCCCTCAATCATGACTAAGGTCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR GCA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCCGTTTCTTCCTCTGCTaGTTCACCGCTGACTGCATC +
Preference number: 4 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSRFFLC*FTADCI
Trigger: GATGCAGTCAGCGGTGAAGCAGCAGAGGAAGAAACG...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp AAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCTGGCGTTTCTTCCTCTaGTGCTTCACCGCTGACTGC +
Preference number: 4 (lower is better)
Translates to: KQMKVHFHGSSSICTTYPWRFFL*CFTADC
Trigger: GCAGTCAGCGGTGAAGCAGCAGAGGAAGAAACGCCA...GGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp CTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGCTTCTAGGCAGCAATCTCCAAAGTCGCAGTaGTGTTCTCGTGGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: LARSKTGTRNHALASRQQSPKSQ*CSRGLV
Trigger: CACCAGACCACGAGAACAGCACTGCGACTTTGGAGA...TTGCTGCCTAGAAGCCAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCTCTCCAAAGTCGCAGTaGTGTTCTCGTGGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSSPKSQ*CSRGLV
Trigger: CACCAGACCACGAGAACAGCACTGCGACTTTGGAGA...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp TGGCACAAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACAGGGCCTGTCTGCAAATaGGCCTCTTCCACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: WHKQMKVHFHGSSSICTTGPVCK*ASSTFW
Trigger: CCAGAAAGTGGAAGAGGCGCATTTGCAGACAGGCCC...TGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCCGAGAGAGGTGGTGCTaGTGGCTGCAGATTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSRERWC*WLQISS
Trigger: TGAAGAAATCTGCAGCCAGCAGCACCACCTCTCTCG...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp TGGCACAAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACACTCCGAGAGAGGTGGTaGTGCTGGCTGCAGATTTCT +
Preference number: 4 (lower is better)
Translates to: WHKQMKVHFHGSSSICTTLRERW*CWLQIS
Trigger: AGAAATCTGCAGCCAGCAGCACCACCTCTCTCGGAG...TGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCGGCAGCAGTAGCATCTaGACAACATACCCCCTTAGC +
Preference number: 4 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSGSSSI*TTYPLS
Trigger: GCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCC...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCTCTGTCTTCAGCATGTaGATCACATCTTCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: FTFTAAVASAQHTPLATASVFSM*ITSSLA
Trigger: GGCCAGAGAAGATGTGATCCACATGCTGAAGACAGA...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCAAGGACTACCTCTCCTaGGTGCCCTGGACTGGAATT +
Preference number: 4 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSKDYLS*VPWTGI
Trigger: AATTCCAGTCCAGGGCACCCAGGAGAGGTAGTCCTT...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp CTATTGATGGGTCCACTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGCGAATATGCAGGGGCTaGCCCTGCTTTGGTGAAAGG +
Preference number: 4 (lower is better)
Translates to: LLMGPLARSKTGTRNHALRICRG*PCFGER
Trigger: CCTTTCACCAAAGCAGGGCCAGCCCCTGCATATTCG...CAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAGTGGACCCATCAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp AAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCGAATATGCAGGGGCTaGCCCTGCTTTGGTGAAAGG +
Preference number: 4 (lower is better)
Translates to: KQMKVHFHGSSSICTTYPRICRG*PCFGER
Trigger: CCTTTCACCAAAGCAGGGCCAGCCCCTGCATATTCG...GGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCTGTAGTAATTGTGACTaGGGACATGGCTCGTTCTGG +
Preference number: 4 (lower is better)
Translates to: FTFTAAVASAQHTPLATACSNCD*GHGSFW
Trigger: CCAGAACGAGCCATGTCCCCAGTCACAATTACTACA...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCCCCATGGGCATTTCCTaGGATTCGGGAGAAACTGCA +
Preference number: 4 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSPMGIS*DSGETA
Trigger: TGCAGTTTCTCCCGAATCCCAGGAAATGCCCATGGG...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp AAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCAGGAGAGGTGATTCCTaGGAGAGCGAAGGACAGTGC +
Preference number: 4 (lower is better)
Translates to: KQMKVHFHGSSSICTTYPRRGDS*ESEGQC
Trigger: GCACTGTCCTTCGCTCTCCCAGGAATCACCTCTCCT...GGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCGAGAGGTGGTGCTGCTaGCTGCAGATTTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSERWCC*LQISSA
Trigger: AGCTGAAGAAATCTGCAGCCAGCAGCACCACCTCTC...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCGCAGCTTCTTCTCCCTaGAATCCCGATCAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSAASSP*NPDQQK
Trigger: TTTCTGCTGATCGGGATTTCAGGGAGAAGAAGCTGC...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237172.12
CDS-3UTR TCA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCAAGTCTGTCCAGCTCTaGAATCGGTTTCTCATAGAC +
Preference number: 4 (lower is better)
Translates to: FTFTAAVASAQHTPLATAKSVQL*NRFLID
Trigger: GTCTATGAGAAACCGATTTCAGAGCTGGACAGACTT...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCTCTTCCCTCAGCTTCTaGGTAAGATCCTGTACTTTC +
Preference number: 4 (lower is better)
Translates to: FTFTAAVASAQHTPLATASSLSF*VRSCTF
Trigger: GAAAGTACAGGATCTTACTCAGAAGCTGAGGGAAGA...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCCTCAGACCCTTTTCGTaGCCTTCCTCTTGTTATTTC +
Preference number: 4 (lower is better)
Translates to: FTFTAAVASAQHTPLATALRPFS*PSSCYF
Trigger: GAAATAACAAGAGGAAGGTCACGAAAAGGGTCTGAG...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCACTCTTTGGTCAGATTaGGAACCTCCTGCCCCATGT +
Preference number: 4 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSTLWSD*EPPAPC
Trigger: ACATGGGGCAGGAGGTTCTCAATCTGACCAAAGAGT...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCAGTTTGGACTCCAGTTaGCGTCACAGGAACATCCAC +
Preference number: 4 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSSLDSS*RHRNIH
Trigger: GTGGATGTTCCTGTGACGTCAACTGGAGTCCAAACT...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp CTATTGATGGGTCCACTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGACACCGTCATTATCTaGATAGGGGATGTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: LLMGPLARSKTGTRNHALDTVII*IGDVGL
Trigger: CAGGCCCACATCCCCTATTCAGATAATGACGGTGTC...CAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAGTGGACCCATCAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp TGGCACAAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACAGGTTCCTCGAGCAGATaGCGTTGTGACCGGTGTTAT +
Preference number: 4 (lower is better)
Translates to: WHKQMKVHFHGSSSICTTGSSSR*RCDRCY
Trigger: ATAACACCGGTCACAACGTCATCTGCTCGAGGAACC...TGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp CTATTGATGGGTCCACTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGGTTCCTCGAGCAGATaGCGTTGTGACCGGTGTTAT +
Preference number: 4 (lower is better)
Translates to: LLMGPLARSKTGTRNHALGSSSR*RCDRCY
Trigger: ATAACACCGGTCACAACGTCATCTGCTCGAGGAACC...CAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAGTGGACCCATCAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCCTAACTCGTATACGGTaGGCCTATGACACTTCTCGG +
Preference number: 4 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSLTRIR*AYDTSR
Trigger: CCGAGAAGTGTCATAGGCGCACCGTATACGAGTTAG...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp AAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCGTTTCTTCCTCTGCTaGTTCACCGCTGACTGCATC +
Preference number: 4 (lower is better)
Translates to: KQMKVHFHGSSSICTTYPRFFLC*FTADCI
Trigger: GATGCAGTCAGCGGTGAAGCAGCAGAGGAAGAAACG...GGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCACTACCTCTCCTGGGTaGCCTGGACTGGAATTTGTT +
Preference number: 4 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSTTSPG*PGLEFV
Trigger: AACAAATTCCAGTCCAGGGCACCCAGGAGAGGTAGT...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp TGGCACAAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATTTGGTCAGATTTCCTaGTCCTGGGGCTGCCACTAC +
Preference number: 4 (lower is better)
Translates to: WHKQMKVHFHGSSSICTTFGQIS*SWGCHY
Trigger: GTAGTGGCAGCCCCAGGAGCAGGAAATCTGACCAAA...TGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCGGTGGTGCTGCTGGCTaGAGATTTCTTCAGCTCTAT +
Preference number: 4 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSGGAAG*RFLQLY
Trigger: ATAGAGCTGAAGAAATCTGCAGCCAGCAGCACCACC...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp CTATTGATGGGTCCACTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGCGAGAGAGGTGGTGCTaGTGGCTGCAGATTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LLMGPLARSKTGTRNHALRERWC*WLQISS
Trigger: TGAAGAAATCTGCAGCCAGCAGCACCACCTCTCTCG...CAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAGTGGACCCATCAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp CTATTGATGGGTCCACTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGGCAGCAGTAGCATCTaGACAACATACCCCCTTAGC +
Preference number: 4 (lower is better)
Translates to: LLMGPLARSKTGTRNHALGSSSI*TTYPLS
Trigger: GCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCC...CAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAGTGGACCCATCAATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp TGGCACAAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACAGGATCACATCTTCTCTaGCCTGCAACTCCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: WHKQMKVHFHGSSSICTTGSHLL*PATPLP
Trigger: TGGAAGGGGAGTTGCAGGCCAGAGAAGATGTGATCC...TGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237172.12
CDS-3UTR CCA 90 bp TGGAGGACCTTAGTCATGATTGAGGGCTGTCCATTCAATAGGGATTCAGAGGTCGGATCACATCTTCTCTaGCCTGCAACTCCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: WRTLVMIEGCPFNRDSEVGSHLL*PATPLP
Trigger: TGGAAGGGGAGTTGCAGGCCAGAGAAGATGTGATCC...GACCTCTGAATCCCTATTGAATGGACAGCCCTCAATCATGACTAAGGTCCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCCTCTGCTGTAGCGCTTaGAAAGCTCCAACTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSLCCSA*KAPTLW
Trigger: CCAAAGAGTTGGAGCTTTCCAAGCGCTACAGCAGAG...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCCCGTATGAATACAGCTaGCGTTTCTTCCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSPYEYS*RFFLCC
Trigger: GCAGCAGAGGAAGAAACGCCAGCTGTATTCATACGG...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp TGGCACAAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACAAAGGACTACCTCTCCTaGGTGCCCTGGACTGGAATT +
Preference number: 4 (lower is better)
Translates to: WHKQMKVHFHGSSSICTTKDYLS*VPWTGI
Trigger: AATTCCAGTCCAGGGCACCCAGGAGAGGTAGTCCTT...TGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp CTATTGATGGGTCCACTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGGACATGGCTCGTTCTaGGCCAAGAGTAGTATCTCC +
Preference number: 4 (lower is better)
Translates to: LLMGPLARSKTGTRNHALGHGSF*AKSSIS
Trigger: GGAGATACTACTCTTGGCCCAGAACGAGCCATGTCC...CAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAGTGGACCCATCAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp CTATTGATGGGTCCACTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGCCCATGGGCATTTCCTaGGATTCGGGAGAAACTGCA +
Preference number: 4 (lower is better)
Translates to: LLMGPLARSKTGTRNHALPMGIS*DSGETA
Trigger: TGCAGTTTCTCCCGAATCCCAGGAAATGCCCATGGG...CAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAGTGGACCCATCAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp AAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCTGTCCTGACACTGACTaGGTTCCTCGAGCAGATGAC +
Preference number: 4 (lower is better)
Translates to: KQMKVHFHGSSSICTTYPCPDTD*VPRADD
Trigger: GTCATCTGCTCGAGGAACCCAGTCAGTGTCAGGACA...GGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp CTATTGATGGGTCCACTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGTGTCCTGACACTGACTaGGTTCCTCGAGCAGATGAC +
Preference number: 4 (lower is better)
Translates to: LLMGPLARSKTGTRNHALCPDTD*VPRADD
Trigger: GTCATCTGCTCGAGGAACCCAGTCAGTGTCAGGACA...CAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAGTGGACCCATCAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp TGGCACAAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACAGAGAGGTGGTGCTGCTaGCTGCAGATTTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: WHKQMKVHFHGSSSICTTERWCC*LQISSA
Trigger: AGCTGAAGAAATCTGCAGCCAGCAGCACCACCTCTC...TGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp TGGCACAAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACAAGTTTGGACTCCAGTTaGCGTCACAGGAACATCCAC +
Preference number: 4 (lower is better)
Translates to: WHKQMKVHFHGSSSICTTSLDSS*RHRNIH
Trigger: GTGGATGTTCCTGTGACGTCAACTGGAGTCCAAACT...TGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp AAATTTGGCTTGCAATTAGGAAATATGGGAGCCGGACTTGAAGAGCGTGTGATTCTGGCCCTGCTTTGGTaGAAGGACTACCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: KFGLQLGNMGAGLEERVILALLW*KDYLSW
Trigger: CCAGGAGAGGTAGTCCTTTCACCAAAGCAGGGCCAG...AATCACACGCTCTTCAAGTCCGGCTCCCATATTTCCTAATTGCAAGCCAAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp CTATTGATGGGTCCACTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGCTCAGCTGGTGCTGCTaGTGTAGACACCGTCATTAT +
Preference number: 4 (lower is better)
Translates to: LLMGPLARSKTGTRNHALLSWCC*CRHRHY
Trigger: ATAATGACGGTGTCTACATCAGCAGCACCAGCTGAG...CAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAGTGGACCCATCAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCTGCTTTCATACCTTTTaGCATAGGAATGCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSCFHTF*HRNAGG
Trigger: CCCACCCGCATTCCTATGTCAAAAGGTATGAAAGCA...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp CTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGCTTCTAGGCAGCAATGCTTTCATACCTTTTaGCATAGGAATGCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LARSKTGTRNHALASRQQCFHTF*HRNAGG
Trigger: CCCACCCGCATTCCTATGTCAAAAGGTATGAAAGCA...TTGCTGCCTAGAAGCCAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp CTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGCTTCTAGGCAGCAATCTATTTTCATAGACTaGGTCTCAGCTCGAGGCTCG +
Preference number: 4 (lower is better)
Translates to: LARSKTGTRNHALASRQQSIFID*VSARGS
Trigger: CGAGCCTCGAGCTGAGACTCAGTCTATGAAAATAGA...TTGCTGCCTAGAAGCCAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCGCAAGATCAGACGACTaGCAATGTAAATCGCATACT +
Preference number: 4 (lower is better)
Translates to: FTFTAAVASAQHTPLATAARSDD*QCKSHT
Trigger: AGTATGCGATTTACATTGTCAGTCGTCTGATCTTGC...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370020.1
CDS-3UTR GCA 90 bp AAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCACAGCTGCTCTAGCATaGGCCGGTAGGTTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: KQMKVHFHGSSSICTTYPTAALA*AGRFLS
Trigger: AGAAAGAAACCTACCGGCGCATGCTAGAGCAGCTGT...GGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp AAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTAACTCGTATACGGTaGGCCTATGACACTTCTCGG +
Preference number: 4 (lower is better)
Translates to: KQMKVHFHGSSSICTTYPLTRIR*AYDTSR
Trigger: CCGAGAAGTGTCATAGGCGCACCGTATACGAGTTAG...GGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCTGTACTTTCTGGCTTTaGAGGCCAAGTTGTTCAATG +
Preference number: 4 (lower is better)
Translates to: FTFTAAVASAQHTPLATACTFWL*RPSCSM
Trigger: CATTGAACAACTTGGCCTGCAAAGCCAGAAAGTACA...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCTCTTCCTCTGCCTTCTaGAGATTTTTGTTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: FTFTAAVASAQHTPLATASSSAF*RFLLVS
Trigger: AGAGACCAACAAAAATCTGCAGAAGGCAGAGGAAGA...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp CTATTGATGGGTCCACTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGTGCTTCACCGCTGACTaGATCAGTTTGGACTCCAGT +
Preference number: 4 (lower is better)
Translates to: LLMGPLARSKTGTRNHALCFTAD*ISLDSS
Trigger: ACTGGAGTCCAAACTGATGCAGTCAGCGGTGAAGCA...CAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAGTGGACCCATCAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp AAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCACTACCTCTCCTGGGTaGCCTGGACTGGAATTTGTT +
Preference number: 4 (lower is better)
Translates to: KQMKVHFHGSSSICTTYPTTSPG*PGLEFV
Trigger: AACAAATTCCAGTCCAGGGCACCCAGGAGAGGTAGT...GGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp TTGCCTGATACACCACTTATTCTTGCTCTGCCACTGATTTGTAGTAGCTGTGTATGCAGGGGCTGGCCCTaGTTTGGTGAAAGGACTACC +
Preference number: 4 (lower is better)
Translates to: LPDTPLILALPLICSSCVCRGWP*FGERTT
Trigger: GGTAGTCCTTTCACCAAAGCAGGGCCAGCCCCTGCA...TACACAGCTACTACAAATCAGTGGCAGAGCAAGAATAAGTGGTGTATCAGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR GCA 90 bp TGGCACAAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACAGGTGGTGCTGCTGGCTaGAGATTTCTTCAGCTCTAT +
Preference number: 4 (lower is better)
Translates to: WHKQMKVHFHGSSSICTTGGAAG*RFLQLY
Trigger: ATAGAGCTGAAGAAATCTGCAGCCAGCAGCACCACC...TGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp TGGCACAAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACACCTATGGATTTCTCCTaGGCAAGAATGGCATCTCGG +
Preference number: 4 (lower is better)
Translates to: WHKQMKVHFHGSSSICTTPMDFS*ARMASR
Trigger: CCGAGATGCCATTCTTGCCCAGGAGAAATCCATAGG...TGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCAGCTCCTCGATTCTTTaGGTTAAGCCAACCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSSSSIL*VKPTSL
Trigger: CAAGCTGGTTGGCTTAACCCAAAGAATCGAGGAGCT...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCTCTGCAGATTTTTGTTaGTCTCTTCTAGCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: FTFTAAVASAQHTPLATASADFC*SLLAPR
Trigger: TCGAGGAGCTAGAAGAGACCAACAAAAATCTGCAGA...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp CTATTGATGGGTCCACTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGCCGTATGAATACAGCTaGCGTTTCTTCCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LLMGPLARSKTGTRNHALPYEYS*RFFLCC
Trigger: GCAGCAGAGGAAGAAACGCCAGCTGTATTCATACGG...CAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAGTGGACCCATCAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp TGGCACAAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACAGCTGTTCTCGTGGTCTaGTGTCACTCGAATATGCAG +
Preference number: 4 (lower is better)
Translates to: WHKQMKVHFHGSSSICTTAVLVV*CHSNMQ
Trigger: CTGCATATTCGAGTGACACCAGACCACGAGAACAGC...TGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp TGGCACAAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACAGCAGTGCTGTTCTCGTaGTCTGGTGTCACTCGAATA +
Preference number: 4 (lower is better)
Translates to: WHKQMKVHFHGSSSICTTAVLFS*SGVTRI
Trigger: TATTCGAGTGACACCAGACCACGAGAACAGCACTGC...TGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp CTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGCTTCTAGGCAGCAATGTAGTAATTGTGACTaGGGACATGGCTCGTTCTGG +
Preference number: 4 (lower is better)
Translates to: LARSKTGTRNHALASRQQCSNCD*GHGSFW
Trigger: CCAGAACGAGCCATGTCCCCAGTCACAATTACTACA...TTGCTGCCTAGAAGCCAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCGGCTGTCACGTTTACTaGTCGGACAGTAATAACTGG +
Preference number: 4 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSGCHVY*SDSNNW
Trigger: CCAGTTATTACTGTCCGACCAGTAAACGTGACAGCC...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp TTAATTTTTCTATTCCAGAGACTCAGTTTGGATGCCCGTGTGTGGGCTTCTAAAGTGGGTGTAGGCCGCTaGGATGACCCGTCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: LIFLFQRLSLDARVWASKVGVGR*DDPSCP
Trigger: AGGACAAGACGGGTCATCCCAGCGGCCTACACCCAC...TTTAGAAGCCCACACACGGGCATCCAAACTGAGTCTCTGGAATAGAAAAATTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp AAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTCGAGGCTCGAATTTaGTCAGATTTCCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: KQMKVHFHGSSSICTTYPLEARI*SDFLLL
Trigger: CAGGAGCAGGAAATCTGACCAAATTCGAGCCTCGAG...GGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp CTATTGATGGGTCCACTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGCTCGAGGCTCGAATTTaGTCAGATTTCCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: LLMGPLARSKTGTRNHALLEARI*SDFLLL
Trigger: CAGGAGCAGGAAATCTGACCAAATTCGAGCCTCGAG...CAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAGTGGACCCATCAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp AAATTTGGCTTGCAATTAGGAAATATGGGAGCCGGACTTGAAGAGCGTGTGATTGCTCCAGCAGGTTGGTaGAGTCGTCGCTCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: KFGLQLGNMGAGLEERVIAPAGW*SRRSCS
Trigger: TGAACAAGAGCGACGACTTCACCAACCTGCTGGAGC...AATCACACGCTCTTCAAGTCCGGCTCCCATATTTCCTAATTGCAAGCCAAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCTCTTCCCTCAGCTTCTaGGTAAGATCCTGTACTTTC +
Preference number: 4 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSSSLSF*VRSCTF
Trigger: GAAAGTACAGGATCTTACTCAGAAGCTGAGGGAAGA...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp CTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGCTTCTAGGCAGCAAATCTCTTCATGCTCTTaGGAAAACCTCGAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: LARSKTGTRNHALASRQQISSCS*ENLEAL
Trigger: CAAGGCTTCGAGGTTTTCTCAAGAGCATGAAGAGAT...TTGCTGCCTAGAAGCCAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp TTGCCTGATACACCACTTATTCTTGCTCTGCCACTGATTTGTAGTAGCTGTGTACTGCTGCTTCACCGCTaGCTGCATCAGTTTGGACTC +
Preference number: 4 (lower is better)
Translates to: LPDTPLILALPLICSSCVLLLHR*LHQFGL
Trigger: GAGTCCAAACTGATGCAGTCAGCGGTGAAGCAGCAG...TACACAGCTACTACAAATCAGTGGCAGAGCAAGAATAAGTGGTGTATCAGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR TCA 90 bp CTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGCTTCTAGGCAGCAAGGAAGGATTTCCGTATaGATACAGCTGGCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: LARSKTGTRNHALASRQQGRISV*IQLAFL
Trigger: AAGAAACGCCAGCTGTATTCATACGGAAATCCTTCC...TTGCTGCCTAGAAGCCAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp TTAATTTTTCTATTCCAGAGACTCAGTTTGGATGCCCGTGTGTGGGCTTCTAAACTGGCCCTGCTTTGGTaGAAGGACTACCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LIFLFQRLSLDARVWASKLALLW*KDYLSW
Trigger: CCAGGAGAGGTAGTCCTTTCACCAAAGCAGGGCCAG...TTTAGAAGCCCACACACGGGCATCCAAACTGAGTCTCTGGAATAGAAAAATTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR TCA 90 bp AAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCTCTATTTTCATAGACTaGGTCTCAGCTCGAGGCTCG +
Preference number: 4 (lower is better)
Translates to: KQMKVHFHGSSSICTTYPSIFID*VSARGS
Trigger: CGAGCCTCGAGCTGAGACTCAGTCTATGAAAATAGA...GGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp TGGCACAAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACAACTGGCACAAACAGATaGAGGTTCACTTTCACGGCA +
Preference number: 4 (lower is better)
Translates to: WHKQMKVHFHGSSSICTTTGTNR*RFTFTA
Trigger: TGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCAGT...TGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp AAACCTCTTCCAGAGTCTCCTGCTTCTAAGTTTTACCTCTTGAATTTACCTCAGAACCTCTCCCGCTCCTaGTCCAGCAGGTTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: KPLPESPASKFYLLNLPQNLSRS*SSRLVK
Trigger: CTTCACCAACCTGCTGGAGCAGGAGCGGGAGAGGTT...CTGAGGTAAATTCAAGAGGTAAAACTTAGAAGCAGGAGACTCTGGAAGAGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR GCA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCTGGTGTTCTTCCTCTTaGAGCTTCTTCCTCAATTCC +
Preference number: 4 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSWCSSS*SFFLNS
Trigger: GGAATTGAGGAAGAAGCTGCAAGAGGAAGAACACCA...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCAGATTGAGAACCTCCTaGCCCATGTTTTTGTTCTTA +
Preference number: 4 (lower is better)
Translates to: FTFTAAVASAQHTPLATARLRTS*PMFLFL
Trigger: TAAGAACAAAAACATGGGGCAGGAGGTTCTCAATCT...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp AAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCATAGTGAGCTCATTTaGTGCTGGAGGATACCTGTC +
Preference number: 4 (lower is better)
Translates to: KQMKVHFHGSSSICTTYPHSELI*CWRIPV
Trigger: GACAGGTATCCTCCAGCAGCAAATGAGCTCACTATG...GGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp CTATTGATGGGTCCACTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGCATAGTGAGCTCATTTaGTGCTGGAGGATACCTGTC +
Preference number: 4 (lower is better)
Translates to: LLMGPLARSKTGTRNHALHSELI*CWRIPV
Trigger: GACAGGTATCCTCCAGCAGCAAATGAGCTCACTATG...CAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAGTGGACCCATCAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp TGGCACAAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATCTGTCTTCAGCATGTaGATCACATCTTCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: WHKQMKVHFHGSSSICTTSVFSM*ITSSLA
Trigger: GGCCAGAGAAGATGTGATCCACATGCTGAAGACAGA...TGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp CTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGCTTCTAGGCAGCAAAGATCCTGTACTTTCTaGCTTTGCAGGCCAAGTTGT +
Preference number: 4 (lower is better)
Translates to: LARSKTGTRNHALASRQQRSCTF*LCRPSC
Trigger: ACAACTTGGCCTGCAAAGCCAGAAAGTACAGGATCT...TTGCTGCCTAGAAGCCAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCCTCAATTCCCTACACTaGGATTCAGTTTTAGTGATC +
Preference number: 4 (lower is better)
Translates to: FTFTAAVASAQHTPLATALNSLH*DSVLVI
Trigger: GATCACTAAAACTGAATCCCAGTGTAGGGAATTGAG...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp TGGCACAAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACACTGACTGCATCAGTTTaGACTCCAGTTGACGTCACA +
Preference number: 4 (lower is better)
Translates to: WHKQMKVHFHGSSSICTTLTASV*TPVDVT
Trigger: TGTGACGTCAACTGGAGTCCAAACTGATGCAGTCAG...TGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp AAATTTGGCTTGCAATTAGGAAATATGGGAGCCGGACTTGAAGAGCGTGTGATTGGATTGTCCGTCCCATaGGCATTTCCTGGGATTCGG +
Preference number: 4 (lower is better)
Translates to: KFGLQLGNMGAGLEERVIGLSVP*AFPGIR
Trigger: CCGAATCCCAGGAAATGCCCATGGGACGGACAATCC...AATCACACGCTCTTCAAGTCCGGCTCCCATATTTCCTAATTGCAAGCCAAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCGTTGTATTTCCGTACTaGAGTTGGAACAGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: FTFTAAVASAQHTPLATAVVFPY*SWNSLF
Trigger: AAACAGACTGTTCCAACTCCAGTACGGAAATACAAC...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp AAATTTGGCTTGCAATTAGGAAATATGGGAGCCGGACTTGAAGAGCGTGTGATTAGGAGAGGTGATTCCTaGGAGAGCGAAGGACAGTGC +
Preference number: 4 (lower is better)
Translates to: KFGLQLGNMGAGLEERVIRRGDS*ESEGQC
Trigger: GCACTGTCCTTCGCTCTCCCAGGAATCACCTCTCCT...AATCACACGCTCTTCAAGTCCGGCTCCCATATTTCCTAATTGCAAGCCAAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp AAACCTCTTCCAGAGTCTCCTGCTTCTAAGTTTTACCTCTTGAATTTACCTCAGTATACGGTGCGCCTATaGCACTTCTCGGCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: KPLPESPASKFYLLNLPQYTVRL*HFSASN
Trigger: GTTGCTGGCCGAGAAGTGTCATAGGCGCACCGTATA...CTGAGGTAAATTCAAGAGGTAAAACTTAGAAGCAGGAGACTCTGGAAGAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR TCA 90 bp TGGCACAAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACAATCTCTTCATGCTCTTaGGAAAACCTCGAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: WHKQMKVHFHGSSSICTTISSCS*ENLEAL
Trigger: CAAGGCTTCGAGGTTTTCTCAAGAGCATGAAGAGAT...TGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp CTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGCTTCTAGGCAGCAAATCTCCTCTAGTTGTTaGGAGAGGAAGTTAGCCTTA +
Preference number: 4 (lower is better)
Translates to: LARSKTGTRNHALASRQQISSSC*ERKLAL
Trigger: TAAGGCTAACTTCCTCTCTCAACAACTAGAGGAGAT...TTGCTGCCTAGAAGCCAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp AAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCTGGCAATTTGGTGCTTaGTCTCCTCTAGTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: KQMKVHFHGSSSICTTYPWQFGA*SPLVVE
Trigger: CTCAACAACTAGAGGAGATCAAGCACCAAATTGCCA...GGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp TGGCACAAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATGGCAATTTGGTGCTTaGTCTCCTCTAGTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: WHKQMKVHFHGSSSICTTWQFGA*SPLVVE
Trigger: CTCAACAACTAGAGGAGATCAAGCACCAAATTGCCA...TGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp TGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGTCAAAAAGCCCTTTCTCCTGAGTaGTGGAGGGGCCGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: CHQRYKHWQIGYLTVSQKALSPE*WRGRFP
Trigger: GGGAAAACGGCCCCTCCATCACTCAGGAGAAAGGGC...TTTTTGACTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR GCA 90 bp CTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGCTTCTAGGCAGCAATCTTCCTCTGCCTTCTaGAGATTTTTGTTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: LARSKTGTRNHALASRQQSSSAF*RFLLVS
Trigger: AGAGACCAACAAAAATCTGCAGAAGGCAGAGGAAGA...TTGCTGCCTAGAAGCCAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp AAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCTGGTGTTCTTCCTCTTaGAGCTTCTTCCTCAATTCC +
Preference number: 4 (lower is better)
Translates to: KQMKVHFHGSSSICTTYPWCSSS*SFFLNS
Trigger: GGAATTGAGGAAGAAGCTGCAAGAGGAAGAACACCA...GGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp AAACCTCTTCCAGAGTCTCCTGCTTCTAAGTTTTACCTCTTGAATTTACCTCAGGGATGTGGGCCTGTCTaGAAATGCGCCTCTTCCACT +
Preference number: 4 (lower is better)
Translates to: KPLPESPASKFYLLNLPQGCGPV*KCASST
Trigger: AGTGGAAGAGGCGCATTTGCAGACAGGCCCACATCC...CTGAGGTAAATTCAAGAGGTAAAACTTAGAAGCAGGAGACTCTGGAAGAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR GCA 90 bp AAATTTGGCTTGCAATTAGGAAATATGGGAGCCGGACTTGAAGAGCGTGTGATTGGATTCGGGAGAAACTaGAATCTCAGCTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: KFGLQLGNMGAGLEERVIGFGRN*NLSWCC
Trigger: GCAGCACCAGCTGAGATTGCAGTTTCTCCCGAATCC...AATCACACGCTCTTCAAGTCCGGCTCCCATATTTCCTAATTGCAAGCCAAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp AAATTTGGCTTGCAATTAGGAAATATGGGAGCCGGACTTGAAGAGCGTGTGATTTTTGGTCAGATTTCCTaGTCCTGGGGCTGCCACTAC +
Preference number: 4 (lower is better)
Translates to: KFGLQLGNMGAGLEERVIFGQIS*SWGCHY
Trigger: GTAGTGGCAGCCCCAGGAGCAGGAAATCTGACCAAA...AATCACACGCTCTTCAAGTCCGGCTCCCATATTTCCTAATTGCAAGCCAAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp TGGAGGACCTTAGTCATGATTGAGGGCTGTCCATTCAATAGGGATTCAGAGGTCGTAGCTGTGTATTACTaGAGTAGCGCTGTTGTCTCT +
Preference number: 4 (lower is better)
Translates to: WRTLVMIEGCPFNRDSEVVAVYY*SSAVVS
Trigger: AGAGACAACAGCGCTACTGCAGTAATACACAGCTAC...GACCTCTGAATCCCTATTGAATGGACAGCCCTCAATCATGACTAAGGTCCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp TGGCACAAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACAGTTGCTAGGTGTTGTTaGGTTCGGAGATTAGGTTTC +
Preference number: 4 (lower is better)
Translates to: WHKQMKVHFHGSSSICTTVARCC*VRRLGF
Trigger: GAAACCTAATCTCCGAACCCAACAACACCTAGCAAC...TGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237172.12
CDS-3UTR CCA 90 bp CTATTGATGGGTCCACTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGAGATCCTGTACTTTCTaGCTTTGCAGGCCAAGTTGT +
Preference number: 4 (lower is better)
Translates to: LLMGPLARSKTGTRNHALRSCTF*LCRPSC
Trigger: ACAACTTGGCCTGCAAAGCCAGAAAGTACAGGATCT...CAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAGTGGACCCATCAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp TTAATTTTTCTATTCCAGAGACTCAGTTTGGATGCCCGTGTGTGGGCTTCTAAACGAATATGCAGGGGCTaGCCCTGCTTTGGTGAAAGG +
Preference number: 4 (lower is better)
Translates to: LIFLFQRLSLDARVWASKRICRG*PCFGER
Trigger: CCTTTCACCAAAGCAGGGCCAGCCCCTGCATATTCG...TTTAGAAGCCCACACACGGGCATCCAAACTGAGTCTCTGGAATAGAAAAATTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp AAATTTGGCTTGCAATTAGGAAATATGGGAGCCGGACTTGAAGAGCGTGTGATTGGACATGGCTCGTTCTaGGCCAAGAGTAGTATCTCC +
Preference number: 4 (lower is better)
Translates to: KFGLQLGNMGAGLEERVIGHGSF*AKSSIS
Trigger: GGAGATACTACTCTTGGCCCAGAACGAGCCATGTCC...AATCACACGCTCTTCAAGTCCGGCTCCCATATTTCCTAATTGCAAGCCAAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp TTAATTTTTCTATTCCAGAGACTCAGTTTGGATGCCCGTGTGTGGGCTTCTAAAGGATTGTCCGTCCCATaGGCATTTCCTGGGATTCGG +
Preference number: 4 (lower is better)
Translates to: LIFLFQRLSLDARVWASKGLSVP*AFPGIR
Trigger: CCGAATCCCAGGAAATGCCCATGGGACGGACAATCC...TTTAGAAGCCCACACACGGGCATCCAAACTGAGTCTCTGGAATAGAAAAATTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp AAACCTCTTCCAGAGTCTCCTGCTTCTAAGTTTTACCTCTTGAATTTACCTCAGGAAGGACAGTGCCGGTaGAAACCTCCTTTTCGGCTG +
Preference number: 4 (lower is better)
Translates to: KPLPESPASKFYLLNLPQEGQCR*KPPFRL
Trigger: CAGCCGAAAAGGAGGTTTCCACCGGCACTGTCCTTC...CTGAGGTAAATTCAAGAGGTAAAACTTAGAAGCAGGAGACTCTGGAAGAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp CTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGCTTCTAGGCAGCAAGGATCACATCTTCTCTaGCCTGTAATAGAAAGTGCA +
Preference number: 4 (lower is better)
Translates to: LARSKTGTRNHALASRQQGSHLL*PVIESA
Trigger: TGCACTTTCTATTACAGGCCAGAGAAGATGTGATCC...TTGCTGCCTAGAAGCCAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370020.1
CDS-3UTR CCA 90 bp TGGAGGACCTTAGTCATGATTGAGGGCTGTCCATTCAATAGGGATTCAGAGGTCGCAGTCCTCCTTGTGTaGCTTTTAGTTATCCTTGTG +
Preference number: 4 (lower is better)
Translates to: WRTLVMIEGCPFNRDSEVAVLLV*LLVILV
Trigger: CACAAGGATAACTAAAAGCCACACAAGGAGGACTGC...GACCTCTGAATCCCTATTGAATGGACAGCCCTCAATCATGACTAAGGTCCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR TCA 90 bp AAATTTGGCTTGCAATTAGGAAATATGGGAGCCGGACTTGAAGAGCGTGTGATTGGACCAGCCAATAGCTaGAGTCATGCAGGAAACAGA +
Preference number: 4 (lower is better)
Translates to: KFGLQLGNMGAGLEERVIGPANS*SHAGNR
Trigger: TCTGTTTCCTGCATGACTTCAGCTATTGGCTGGTCC...AATCACACGCTCTTCAAGTCCGGCTCCCATATTTCCTAATTGCAAGCCAAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237172.12
CDS-3UTR TCA 90 bp AATGTATCACGTTATGGCATCGATAAACATTTCTGTTCAAATGTGTGGATCTACCACCAGCATTGCCGATaGTGGAGGGCTTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: NVSRYGIDKHFCSNVWIYHQHCR*WRAWDR
Trigger: CCTGTCCCAAGCCCTCCATCATCGGCAATGCTGGTG...GTAGATCCACACATTTGAACAGAAATGTTTATCGATGCCATAACGTGATACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR TCA 90 bp AAATTTGGCTTGCAATTAGGAAATATGGGAGCCGGACTTGAAGAGCGTGTGATTCAGTTCCTGAGGCCATaGCATCATCCTCCTTCCTAT +
Preference number: 4 (lower is better)
Translates to: KFGLQLGNMGAGLEERVIQFLRP*HHPPSY
Trigger: ATAGGAAGGAGGATGATGTCATGGCCTCAGGAACTG...AATCACACGCTCTTCAAGTCCGGCTCCCATATTTCCTAATTGCAAGCCAAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237172.12
CDS-3UTR TCA 90 bp TGGCACAAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACACAGCATCACGGTAAATaGCTTCAACTTGGTAAGATC +
Preference number: 4 (lower is better)
Translates to: WHKQMKVHFHGSSSICTTQHHGK*LQLGKI
Trigger: GATCTTACCAAGTTGAAGTCATTTACCGTGATGCTG...TGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp TGGAGGACCTTAGTCATGATTGAGGGCTGTCCATTCAATAGGGATTCAGAGGTCCAGCATCACGGTAAATaGCTTCAACTTGGTAAGATC +
Preference number: 4 (lower is better)
Translates to: WRTLVMIEGCPFNRDSEVQHHGK*LQLGKI
Trigger: GATCTTACCAAGTTGAAGTCATTTACCGTGATGCTG...GACCTCTGAATCCCTATTGAATGGACAGCCCTCAATCATGACTAAGGTCCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR TCA 90 bp AAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCATCTCCTCTAGTTGTTaGGAGAGGAAGTTAGCCTTA +
Preference number: 4 (lower is better)
Translates to: KQMKVHFHGSSSICTTYPISSSC*ERKLAL
Trigger: TAAGGCTAACTTCCTCTCTCAACAACTAGAGGAGAT...GGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp CTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGCTTCTAGGCAGCAAGTTATTCTTGGTTTCTaGTTCCCTAAGGTAGGAATG +
Preference number: 4 (lower is better)
Translates to: LARSKTGTRNHALASRQQVILGF*FPKVGM
Trigger: CATTCCTACCTTAGGGAATCAGAAACCAAGAATAAC...TTGCTGCCTAGAAGCCAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp AAACCTCTTCCAGAGTCTCCTGCTTCTAAGTTTTACCTCTTGAATTTACCTCAGGACACCGTCATTATCTaGATAGGGGATGTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: KPLPESPASKFYLLNLPQDTVII*IGDVGL
Trigger: CAGGCCCACATCCCCTATTCAGATAATGACGGTGTC...CTGAGGTAAATTCAAGAGGTAAAACTTAGAAGCAGGAGACTCTGGAAGAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR TCA 90 bp TGGAGGACCTTAGTCATGATTGAGGGCTGTCCATTCAATAGGGATTCAGAGGTCTCTGACGTTGAGATTTaGGTAATGCACGTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: WRTLVMIEGCPFNRDSEVSDVEI*VMHVVL
Trigger: AAGCACAACGTGCATTACTCAAATCTCAACGTCAGA...GACCTCTGAATCCCTATTGAATGGACAGCCCTCAATCATGACTAAGGTCCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR GCA 90 bp AAATTTGGCTTGCAATTAGGAAATATGGGAGCCGGACTTGAAGAGCGTGTGATTACAGCTGCTCTAGCATaGGCCGGTAGGTTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: KFGLQLGNMGAGLEERVITAALA*AGRFLS
Trigger: AGAAAGAAACCTACCGGCGCATGCTAGAGCAGCTGT...AATCACACGCTCTTCAAGTCCGGCTCCCATATTTCCTAATTGCAAGCCAAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp CTATTGATGGGTCCACTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGAAGATTTTCCACTTCTaGCATGAGGCTAGAGTTTCC +
Preference number: 4 (lower is better)
Translates to: LLMGPLARSKTGTRNHALKIFHF*HEARVS
Trigger: GGAAACTCTAGCCTCATGGCAGAAGTGGAAAATCTT...CAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAGTGGACCCATCAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp CTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGCTTCTAGGCAGCAATTAAATGTAGCTGGGTaGACTCAGATTTACTCTTGC +
Preference number: 4 (lower is better)
Translates to: LARSKTGTRNHALASRQQLNVAG*TQIYSC
Trigger: GCAAGAGTAAATCTGAGTGCACCCAGCTACATTTAA...TTGCTGCCTAGAAGCCAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCTTAAATGTAGCTGGGTaGACTCAGATTTACTCTTGC +
Preference number: 4 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSLNVAG*TQIYSC
Trigger: GCAAGAGTAAATCTGAGTGCACCCAGCTACATTTAA...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCTTAGTAAGTCAACACTaGAGCTTAATTCAGAGGATT +
Preference number: 4 (lower is better)
Translates to: FTFTAAVASAQHTPLATALVSQH*SLIQRI
Trigger: AATCCTCTGAATTAAGCTGCAGTGTTGACTTACTAA...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCAAGTTAGCCTTATCCTaGTCAGTTCTAAATTTCTGT +
Preference number: 4 (lower is better)
Translates to: FTFTAAVASAQHTPLATAKLALS*SVLNFC
Trigger: ACAGAAATTTAGAACTGAGCAGGATAAGGCTAACTT...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCTTCTTGGCAATTTGGTaGTTGATCTCCTCTAGTTGT +
Preference number: 4 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSFLAIW*LISSSC
Trigger: ACAACTAGAGGAGATCAAGCACCAAATTGCCAAGAA...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp AAACCTCTTCCAGAGTCTCCTGCTTCTAAGTTTTACCTCTTGAATTTACCTCAGCGTTTCTTCCTCTGCTaGTTCACCGCTGACTGCATC +
Preference number: 4 (lower is better)
Translates to: KPLPESPASKFYLLNLPQRFFLC*FTADCI
Trigger: GATGCAGTCAGCGGTGAAGCAGCAGAGGAAGAAACG...CTGAGGTAAATTCAAGAGGTAAAACTTAGAAGCAGGAGACTCTGGAAGAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR GCA 90 bp AAACCTCTTCCAGAGTCTCCTGCTTCTAAGTTTTACCTCTTGAATTTACCTCAGTCTCCAAAGTCGCAGTaGTGTTCTCGTGGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: KPLPESPASKFYLLNLPQSPKSQ*CSRGLV
Trigger: CACCAGACCACGAGAACAGCACTGCGACTTTGGAGA...CTGAGGTAAATTCAAGAGGTAAAACTTAGAAGCAGGAGACTCTGGAAGAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR GCA 90 bp AAACCTCTTCCAGAGTCTCCTGCTTCTAAGTTTTACCTCTTGAATTTACCTCAGGGATTCGGGAGAAACTaGAATCTCAGCTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: KPLPESPASKFYLLNLPQGFGRN*NLSWCC
Trigger: GCAGCACCAGCTGAGATTGCAGTTTCTCCCGAATCC...CTGAGGTAAATTCAAGAGGTAAAACTTAGAAGCAGGAGACTCTGGAAGAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp TGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGTCAAAAACCGCAGCACTTTCTCTaGCTCCGCAGACCCGTAATG +
Preference number: 4 (lower is better)
Translates to: CHQRYKHWQIGYLTVSQKPQHFL*LRRPVM
Trigger: CATTACGGGTCTGCGGAGCCAGAGAAAGTGCTGCGG...TTTTTGACTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp TGGCACAAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACAACCACTTCCAATTGTTaGAGACGTTTCTTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: WHKQMKVHFHGSSSICTTTTSNC*RRFFSL
Trigger: GAGACTGAAGAAACGTCTCCAACAATTGGAAGTGGT...TGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp AAATTTGGCTTGCAATTAGGAAATATGGGAGCCGGACTTGAAGAGCGTGTGATTCTCTGCTGTAGCGCTTaGAAAGCTCCAACTCTTTGG +
Preference number: 4 (lower is better)
Translates to: KFGLQLGNMGAGLEERVILCCSA*KAPTLW
Trigger: CCAAAGAGTTGGAGCTTTCCAAGCGCTACAGCAGAG...AATCACACGCTCTTCAAGTCCGGCTCCCATATTTCCTAATTGCAAGCCAAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp CTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGCTTCTAGGCAGCAACCTCTTTCTCATCCATaGAATCCAAGACTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: LARSKTGTRNHALASRQQPLSHP*NPRLSH
Trigger: ATGAGAAAGTCTTGGATTCCATGGATGAGAAAGAGG...TTGCTGCCTAGAAGCCAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp AAATTTGGCTTGCAATTAGGAAATATGGGAGCCGGACTTGAAGAGCGTGTGATTGCTGTTCTCGTGGTCTaGTGTCACTCGAATATGCAG +
Preference number: 4 (lower is better)
Translates to: KFGLQLGNMGAGLEERVIAVLVV*CHSNMQ
Trigger: CTGCATATTCGAGTGACACCAGACCACGAGAACAGC...AATCACACGCTCTTCAAGTCCGGCTCCCATATTTCCTAATTGCAAGCCAAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp TTAATTTTTCTATTCCAGAGACTCAGTTTGGATGCCCGTGTGTGGGCTTCTAAACCCATGGGCATTTCCTaGGATTCGGGAGAAACTGCA +
Preference number: 4 (lower is better)
Translates to: LIFLFQRLSLDARVWASKPMGIS*DSGETA
Trigger: TGCAGTTTCTCCCGAATCCCAGGAAATGCCCATGGG...TTTAGAAGCCCACACACGGGCATCCAAACTGAGTCTCTGGAATAGAAAAATTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp AAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCTTTCCGTACTGGAGTTaGAACAGTCTGTTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: KQMKVHFHGSSSICTTYPFPYWS*NSLFFW
Trigger: CCAGAAAAACAGACTGTTCCAACTCCAGTACGGAAA...GGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp CTATTGATGGGTCCACTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGTTTCCGTACTGGAGTTaGAACAGTCTGTTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: LLMGPLARSKTGTRNHALFPYWS*NSLFFW
Trigger: CCAGAAAAACAGACTGTTCCAACTCCAGTACGGAAA...CAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAGTGGACCCATCAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCGTTGTATTTCCGTACTaGAGTTGGAACAGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSVVFPY*SWNSLF
Trigger: AAACAGACTGTTCCAACTCCAGTACGGAAATACAAC...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp AAACCTCTTCCAGAGTCTCCTGCTTCTAAGTTTTACCTCTTGAATTTACCTCAGACAGTGACACAATCATaGCTCCCTGCAGCCTCCATC +
Preference number: 4 (lower is better)
Translates to: KPLPESPASKFYLLNLPQTVTQS*LPAASI
Trigger: GATGGAGGCTGCAGGGAGCCATGATTGTGTCACTGT...CTGAGGTAAATTCAAGAGGTAAAACTTAGAAGCAGGAGACTCTGGAAGAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR TCA 90 bp TTAATTTTTCTATTCCAGAGACTCAGTTTGGATGCCCGTGTGTGGGCTTCTAAACAGTTCCTGAGGCCATaGCATCATCCTCCTTCCTAT +
Preference number: 4 (lower is better)
Translates to: LIFLFQRLSLDARVWASKQFLRP*HHPPSY
Trigger: ATAGGAAGGAGGATGATGTCATGGCCTCAGGAACTG...TTTAGAAGCCCACACACGGGCATCCAAACTGAGTCTCTGGAATAGAAAAATTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR TCA 90 bp TGGCACAAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACAAATTTCTGTTCCAGCTaGTCATACTCATCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: WHKQMKVHFHGSSSICTTNFCSS*SYSSSV
Trigger: GACAGAAGATGAGTATGATCAGCTGGAACAGAAATT...TGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp TTAATTTTTCTATTCCAGAGACTCAGTTTGGATGCCCGTGTGTGGGCTTCTAAAACTCTTTGGTCAGATTaGGAACCTCCTGCCCCATGT +
Preference number: 4 (lower is better)
Translates to: LIFLFQRLSLDARVWASKTLWSD*EPPAPC
Trigger: ACATGGGGCAGGAGGTTCTCAATCTGACCAAAGAGT...TTTAGAAGCCCACACACGGGCATCCAAACTGAGTCTCTGGAATAGAAAAATTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR TCA 90 bp TGGCACAAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACAGTTATTCTTGGTTTCTaGTTCCCTAAGGTAGGAATG +
Preference number: 4 (lower is better)
Translates to: WHKQMKVHFHGSSSICTTVILGF*FPKVGM
Trigger: CATTCCTACCTTAGGGAATCAGAAACCAAGAATAAC...TGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCAGGCATAACGTTTGGTaGTGGAATAATGGTTATTCT +
Preference number: 4 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSRHNVW*WNNGYS
Trigger: AGAATAACCATTATTCCATCACCAAACGTTATGCCT...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp TTAATTTTTCTATTCCAGAGACTCAGTTTGGATGCCCGTGTGTGGGCTTCTAAAACAGCTGCTCTAGCATaGGCCGGTAGGTTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: LIFLFQRLSLDARVWASKTAALA*AGRFLS
Trigger: AGAAAGAAACCTACCGGCGCATGCTAGAGCAGCTGT...TTTAGAAGCCCACACACGGGCATCCAAACTGAGTCTCTGGAATAGAAAAATTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR GCA 90 bp CTATTGATGGGTCCACTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGTTCTTGGCAATTTGGTaGTTGATCTCCTCTAGTTGT +
Preference number: 4 (lower is better)
Translates to: LLMGPLARSKTGTRNHALFLAIW*LISSSC
Trigger: ACAACTAGAGGAGATCAAGCACCAAATTGCCAAGAA...CAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAGTGGACCCATCAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp TGGAGGACCTTAGTCATGATTGAGGGCTGTCCATTCAATAGGGATTCAGAGGTCTTCTTGGCAATTTGGTaGTTGATCTCCTCTAGTTGT +
Preference number: 4 (lower is better)
Translates to: WRTLVMIEGCPFNRDSEVFLAIW*LISSSC
Trigger: ACAACTAGAGGAGATCAAGCACCAAATTGCCAAGAA...GACCTCTGAATCCCTATTGAATGGACAGCCCTCAATCATGACTAAGGTCCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR GCA 90 bp CTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGCTTCTAGGCAGCAATTCTTCAATCCCACCTaGCGAAGATTACTCATAATA +
Preference number: 4 (lower is better)
Translates to: LARSKTGTRNHALASRQQFFNPT*RRLLII
Trigger: TATTATGAGTAATCTTCGGCAGGTGGGATTGAAGAA...TTGCTGCCTAGAAGCCAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp AAACCTCTTCCAGAGTCTCCTGCTTCTAAGTTTTACCTCTTGAATTTACCTCAGACTACCTCTCCTGGGTaGCCTGGACTGGAATTTGTT +
Preference number: 4 (lower is better)
Translates to: KPLPESPASKFYLLNLPQTTSPG*PGLEFV
Trigger: AACAAATTCCAGTCCAGGGCACCCAGGAGAGGTAGT...CTGAGGTAAATTCAAGAGGTAAAACTTAGAAGCAGGAGACTCTGGAAGAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR GCA 90 bp AATGTATCACGTTATGGCATCGATAAACATTTCTGTTCAAATGTGTGGATCTACACAATCATGGCTCCCTaGAGCCTCCATCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: NVSRYGIDKHFCSNVWIYTIMAP*SLHLLG
Trigger: GCCCAGGAGATGGAGGCTGCAGGGAGCCATGATTGT...GTAGATCCACACATTTGAACAGAAATGTTTATCGATGCCATAACGTGATACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp TTAATTTTTCTATTCCAGAGACTCAGTTTGGATGCCCGTGTGTGGGCTTCTAAACCTATGGATTTCTCCTaGGCAAGAATGGCATCTCGG +
Preference number: 4 (lower is better)
Translates to: LIFLFQRLSLDARVWASKPMDFS*ARMASR
Trigger: CCGAGATGCCATTCTTGCCCAGGAGAAATCCATAGG...TTTAGAAGCCCACACACGGGCATCCAAACTGAGTCTCTGGAATAGAAAAATTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp TTGCCTGATACACCACTTATTCTTGCTCTGCCACTGATTTGTAGTAGCTGTGTAAGCTCCTCGATTCTTTaGGTTAAGCCAACCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LPDTPLILALPLICSSCVSSSIL*VKPTSL
Trigger: CAAGCTGGTTGGCTTAACCCAAAGAATCGAGGAGCT...TACACAGCTACTACAAATCAGTGGCAGAGCAAGAATAAGTGGTGTATCAGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp TGGAGGACCTTAGTCATGATTGAGGGCTGTCCATTCAATAGGGATTCAGAGGTCCTCAATTCCCTACACTaGGATTCAGTTTTAGTGATC +
Preference number: 4 (lower is better)
Translates to: WRTLVMIEGCPFNRDSEVLNSLH*DSVLVI
Trigger: GATCACTAAAACTGAATCCCAGTGTAGGGAATTGAG...GACCTCTGAATCCCTATTGAATGGACAGCCCTCAATCATGACTAAGGTCCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCTTATTCTTGGCAATTTaGTGCTTGATCTCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSLFLAI*CLISSS
Trigger: ACTAGAGGAGATCAAGCACCAAATTGCCAAGAATAA...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp TTAATTTTTCTATTCCAGAGACTCAGTTTGGATGCCCGTGTGTGGGCTTCTAAACCGTATGAATACAGCTaGCGTTTCTTCCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LIFLFQRLSLDARVWASKPYEYS*RFFLCC
Trigger: GCAGCAGAGGAAGAAACGCCAGCTGTATTCATACGG...TTTAGAAGCCCACACACGGGCATCCAAACTGAGTCTCTGGAATAGAAAAATTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp AATGTATCACGTTATGGCATCGATAAACATTTCTGTTCAAATGTGTGGATCTACCTGGGTGCCCTGGACTaGAATTTGTTCGGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: NVSRYGIDKHFCSNVWIYLGALD*NLFGAL
Trigger: AAGGGCCCCGAACAAATTCCAGTCCAGGGCACCCAG...GTAGATCCACACATTTGAACAGAAATGTTTATCGATGCCATAACGTGATACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp TTAATTTTTCTATTCCAGAGACTCAGTTTGGATGCCCGTGTGTGGGCTTCTAAAGCTGTTCTCGTGGTCTaGTGTCACTCGAATATGCAG +
Preference number: 4 (lower is better)
Translates to: LIFLFQRLSLDARVWASKAVLVV*CHSNMQ
Trigger: CTGCATATTCGAGTGACACCAGACCACGAGAACAGC...TTTAGAAGCCCACACACGGGCATCCAAACTGAGTCTCTGGAATAGAAAAATTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp TTAATTTTTCTATTCCAGAGACTCAGTTTGGATGCCCGTGTGTGGGCTTCTAAAGCAGTGCTGTTCTCGTaGTCTGGTGTCACTCGAATA +
Preference number: 4 (lower is better)
Translates to: LIFLFQRLSLDARVWASKAVLFS*SGVTRI
Trigger: TATTCGAGTGACACCAGACCACGAGAACAGCACTGC...TTTAGAAGCCCACACACGGGCATCCAAACTGAGTCTCTGGAATAGAAAAATTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp TGGCACAAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACAAACAGTCTGTTTTTCTaGGGTGACTTTGAGGATTGT +
Preference number: 4 (lower is better)
Translates to: WHKQMKVHFHGSSSICTTNSLFF*GDFEDC
Trigger: ACAATCCTCAAAGTCACCCCAGAAAAACAGACTGTT...TGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp TGGAGGACCTTAGTCATGATTGAGGGCTGTCCATTCAATAGGGATTCAGAGGTCGTTGTATTTCCGTACTaGAGTTGGAACAGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: WRTLVMIEGCPFNRDSEVVVFPY*SWNSLF
Trigger: AAACAGACTGTTCCAACTCCAGTACGGAAATACAAC...GACCTCTGAATCCCTATTGAATGGACAGCCCTCAATCATGACTAAGGTCCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp AAATTTGGCTTGCAATTAGGAAATATGGGAGCCGGACTTGAAGAGCGTGTGATTGGCTGTCACGTTTACTaGTCGGACAGTAATAACTGG +
Preference number: 4 (lower is better)
Translates to: KFGLQLGNMGAGLEERVIGCHVY*SDSNNW
Trigger: CCAGTTATTACTGTCCGACCAGTAAACGTGACAGCC...AATCACACGCTCTTCAAGTCCGGCTCCCATATTTCCTAATTGCAAGCCAAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp AAATTTGGCTTGCAATTAGGAAATATGGGAGCCGGACTTGAAGAGCGTGTGATTAAGTCTGTCCAGCTCTaGAATCGGTTTCTCATAGAC +
Preference number: 4 (lower is better)
Translates to: KFGLQLGNMGAGLEERVIKSVQL*NRFLID
Trigger: GTCTATGAGAAACCGATTTCAGAGCTGGACAGACTT...AATCACACGCTCTTCAAGTCCGGCTCCCATATTTCCTAATTGCAAGCCAAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp TTGCCTGATACACCACTTATTCTTGCTCTGCCACTGATTTGTAGTAGCTGTGTATCTTCCCTCAGCTTCTaGGTAAGATCCTGTACTTTC +
Preference number: 4 (lower is better)
Translates to: LPDTPLILALPLICSSCVSSLSF*VRSCTF
Trigger: GAAAGTACAGGATCTTACTCAGAAGCTGAGGGAAGA...TACACAGCTACTACAAATCAGTGGCAGAGCAAGAATAAGTGGTGTATCAGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR TCA 90 bp TTGCCTGATACACCACTTATTCTTGCTCTGCCACTGATTTGTAGTAGCTGTGTATGGCAATTTGGTGCTTaGTCTCCTCTAGTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: LPDTPLILALPLICSSCVWQFGA*SPLVVE
Trigger: CTCAACAACTAGAGGAGATCAAGCACCAAATTGCCA...TACACAGCTACTACAAATCAGTGGCAGAGCAAGAATAAGTGGTGTATCAGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR TCA 90 bp AAATTTGGCTTGCAATTAGGAAATATGGGAGCCGGACTTGAAGAGCGTGTGATTGGAAGGATTTCCGTATaGATACAGCTGGCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: KFGLQLGNMGAGLEERVIGRISV*IQLAFL
Trigger: AAGAAACGCCAGCTGTATTCATACGGAAATCCTTCC...AATCACACGCTCTTCAAGTCCGGCTCCCATATTTCCTAATTGCAAGCCAAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp TGGCACAAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACAAGGCATAACGTTTGGTaGTGGAATAATGGTTATTCT +
Preference number: 4 (lower is better)
Translates to: WHKQMKVHFHGSSSICTTRHNVW*WNNGYS
Trigger: AGAATAACCATTATTCCATCACCAAACGTTATGCCT...TGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp TGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGTCAAAAAGGTTCCTCGAGCAGATaGCGTTGTGACCGGTGTTAT +
Preference number: 4 (lower is better)
Translates to: CHQRYKHWQIGYLTVSQKGSSSR*RCDRCY
Trigger: ATAACACCGGTCACAACGTCATCTGCTCGAGGAACC...TTTTTGACTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR TCA 90 bp TGGAGGACCTTAGTCATGATTGAGGGCTGTCCATTCAATAGGGATTCAGAGGTCAATCAGAAGTATAATTaGACTGTCAGTCGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: WRTLVMIEGCPFNRDSEVNQKYN*TVSRSC
Trigger: ACAGCTTCGACTGACAGTTCAATTATACTTCTGATT...GACCTCTGAATCCCTATTGAATGGACAGCCCTCAATCATGACTAAGGTCCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR GCA 90 bp AAATTTGGCTTGCAATTAGGAAATATGGGAGCCGGACTTGAAGAGCGTGTGATTTTGGGACAGGAGATATaGCCATCAGATGCACTTTCA +
Preference number: 4 (lower is better)
Translates to: KFGLQLGNMGAGLEERVILGQEI*PSDALS
Trigger: TGAAAGTGCATCTGATGGGCATATCTCCTGTCCCAA...AATCACACGCTCTTCAAGTCCGGCTCCCATATTTCCTAATTGCAAGCCAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237172.12
CDS-3UTR GCA 90 bp CTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGCTTCTAGGCAGCAAAAGTTAGCCTTATCCTaGTCAGTTCTAAATTTCTGT +
Preference number: 4 (lower is better)
Translates to: LARSKTGTRNHALASRQQKLALS*SVLNFC
Trigger: ACAGAAATTTAGAACTGAGCAGGATAAGGCTAACTT...TTGCTGCCTAGAAGCCAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp AATGTATCACGTTATGGCATCGATAAACATTTCTGTTCAAATGTGTGGATCTACTGGCGTTTCTTCCTCTaGTGCTTCACCGCTGACTGC +
Preference number: 4 (lower is better)
Translates to: NVSRYGIDKHFCSNVWIYWRFFL*CFTADC
Trigger: GCAGTCAGCGGTGAAGCAGCAGAGGAAGAAACGCCA...GTAGATCCACACATTTGAACAGAAATGTTTATCGATGCCATAACGTGATACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR GCA 90 bp TGGAGGACCTTAGTCATGATTGAGGGCTGTCCATTCAATAGGGATTCAGAGGTCTTCTTCAATCCCACCTaGCGAAGATTACTCATAATA +
Preference number: 4 (lower is better)
Translates to: WRTLVMIEGCPFNRDSEVFFNPT*RRLLII
Trigger: TATTATGAGTAATCTTCGGCAGGTGGGATTGAAGAA...GACCTCTGAATCCCTATTGAATGGACAGCCCTCAATCATGACTAAGGTCCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR GCA 90 bp ATAATTTTGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGGGTGTCACTCGAATATaGAGGGGCTGGCCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: IILPSEVQTLANRILNCEGVTRI*RGWPCF
Trigger: AAAGCAGGGCCAGCCCCTGCATATTCGAGTGACACC...CTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCAAAATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR GCA 90 bp AATGTATCACGTTATGGCATCGATAAACATTTCTGTTCAAATGTGTGGATCTACGGGCCTGTCTGCAAATaGGCCTCTTCCACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: NVSRYGIDKHFCSNVWIYGPVCK*ASSTFW
Trigger: CCAGAAAGTGGAAGAGGCGCATTTGCAGACAGGCCC...GTAGATCCACACATTTGAACAGAAATGTTTATCGATGCCATAACGTGATACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR GCA 90 bp AAATTTGGCTTGCAATTAGGAAATATGGGAGCCGGACTTGAAGAGCGTGTGATTGCCTGTAATAGAAAGTaGAGCAAGATCAGACGACTG +
Preference number: 4 (lower is better)
Translates to: KFGLQLGNMGAGLEERVIACNRK*SKIRRL
Trigger: CAGTCGTCTGATCTTGCTGCACTTTCTATTACAGGC...AATCACACGCTCTTCAAGTCCGGCTCCCATATTTCCTAATTGCAAGCCAAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370020.1
CDS-3UTR GCA 90 bp TTGCCTGATACACCACTTATTCTTGCTCTGCCACTGATTTGTAGTAGCTGTGTAAAAGAAGGGGAAATATaGTTCAGGTGCCAGTTGCGT +
Preference number: 4 (lower is better)
Translates to: LPDTPLILALPLICSSCVKEGEI*FRCQLR
Trigger: ACGCAACTGGCACCTGAAGCATATTTCCCCTTCTTT...TACACAGCTACTACAAATCAGTGGCAGAGCAAGAATAAGTGGTGTATCAGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp AAACCTCTTCCAGAGTCTCCTGCTTCTAAGTTTTACCTCTTGAATTTACCTCAGTCTGTCTTCAGCATGTaGATCACATCTTCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: KPLPESPASKFYLLNLPQSVFSM*ITSSLA
Trigger: GGCCAGAGAAGATGTGATCCACATGCTGAAGACAGA...CTGAGGTAAATTCAAGAGGTAAAACTTAGAAGCAGGAGACTCTGGAAGAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp TTGCCTGATACACCACTTATTCTTGCTCTGCCACTGATTTGTAGTAGCTGTGTAAGATCCTGTACTTTCTaGCTTTGCAGGCCAAGTTGT +
Preference number: 4 (lower is better)
Translates to: LPDTPLILALPLICSSCVRSCTF*LCRPSC
Trigger: ACAACTTGGCCTGCAAAGCCAGAAAGTACAGGATCT...TACACAGCTACTACAAATCAGTGGCAGAGCAAGAATAAGTGGTGTATCAGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp AAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCAGATTTAAATGTAGCTaGGTGCACTCAGATTTACTC +
Preference number: 4 (lower is better)
Translates to: KQMKVHFHGSSSICTTYPRFKCS*VHSDLL
Trigger: GAGTAAATCTGAGTGCACCCAGCTACATTTAAATCT...GGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp TGGAGGACCTTAGTCATGATTGAGGGCTGTCCATTCAATAGGGATTCAGAGGTCAGATTTAAATGTAGCTaGGTGCACTCAGATTTACTC +
Preference number: 4 (lower is better)
Translates to: WRTLVMIEGCPFNRDSEVRFKCS*VHSDLL
Trigger: GAGTAAATCTGAGTGCACCCAGCTACATTTAAATCT...GACCTCTGAATCCCTATTGAATGGACAGCCCTCAATCATGACTAAGGTCCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp TTAATTTTTCTATTCCAGAGACTCAGTTTGGATGCCCGTGTGTGGGCTTCTAAACTGACTGCATCAGTTTaGACTCCAGTTGACGTCACA +
Preference number: 4 (lower is better)
Translates to: LIFLFQRLSLDARVWASKLTASV*TPVDVT
Trigger: TGTGACGTCAACTGGAGTCCAAACTGATGCAGTCAG...TTTAGAAGCCCACACACGGGCATCCAAACTGAGTCTCTGGAATAGAAAAATTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp TTAATTTTTCTATTCCAGAGACTCAGTTTGGATGCCCGTGTGTGGGCTTCTAAATGTAGTAATTGTGACTaGGGACATGGCTCGTTCTGG +
Preference number: 4 (lower is better)
Translates to: LIFLFQRLSLDARVWASKCSNCD*GHGSFW
Trigger: CCAGAACGAGCCATGTCCCCAGTCACAATTACTACA...TTTAGAAGCCCACACACGGGCATCCAAACTGAGTCTCTGGAATAGAAAAATTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp ATAATTTTGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGAGGAGAGGTGATTCCTaGGAGAGCGAAGGACAGTGC +
Preference number: 4 (lower is better)
Translates to: IILPSEVQTLANRILNCERRGDS*ESEGQC
Trigger: GCACTGTCCTTCGCTCTCCCAGGAATCACCTCTCCT...CTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCAAAATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp TGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGTCAAAAATGTCCTGACACTGACTaGGTTCCTCGAGCAGATGAC +
Preference number: 4 (lower is better)
Translates to: CHQRYKHWQIGYLTVSQKCPDTD*VPRADD
Trigger: GTCATCTGCTCGAGGAACCCAGTCAGTGTCAGGACA...TTTTTGACTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp AAACCTCTTCCAGAGTCTCCTGCTTCTAAGTTTTACCTCTTGAATTTACCTCAGTGTGAACTAGAGAAATaGGCCAGCAGTCCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: KPLPESPASKFYLLNLPQCELEK*ASSPPC
Trigger: ACAAGGAGGACTGCTGGCCCATTTCTCTAGTTCACA...CTGAGGTAAATTCAAGAGGTAAAACTTAGAAGCAGGAGACTCTGGAAGAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp TGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGTCAAAAATCCAGAGACTCAGTTTaGATGCCCGTGTGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: CHQRYKHWQIGYLTVSQKSRDSV*MPVCGL
Trigger: AAGCCCACACACGGGCATCCAAACTGAGTCTCTGGA...TTTTTGACTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR TCA 90 bp AAATTTGGCTTGCAATTAGGAAATATGGGAGCCGGACTTGAAGAGCGTGTGATTCAGCATCACGGTAAATaGCTTCAACTTGGTAAGATC +
Preference number: 4 (lower is better)
Translates to: KFGLQLGNMGAGLEERVIQHHGK*LQLGKI
Trigger: GATCTTACCAAGTTGAAGTCATTTACCGTGATGCTG...AATCACACGCTCTTCAAGTCCGGCTCCCATATTTCCTAATTGCAAGCCAAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp TGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGTCAAAAACTCAGCTGGTGCTGCTaGTGTAGACACCGTCATTAT +
Preference number: 4 (lower is better)
Translates to: CHQRYKHWQIGYLTVSQKLSWCC*CRHRHY
Trigger: ATAATGACGGTGTCTACATCAGCAGCACCAGCTGAG...TTTTTGACTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR TCA 90 bp AATGTATCACGTTATGGCATCGATAAACATTTCTGTTCAAATGTGTGGATCTACGCTGAGCACAACCTGTaGACTAGAGAAATGGGCCAG +
Preference number: 4 (lower is better)
Translates to: NVSRYGIDKHFCSNVWIYAEHNL*TREMGQ
Trigger: CTGGCCCATTTCTCTAGTTCACAGGTTGTGCTCAGC...GTAGATCCACACATTTGAACAGAAATGTTTATCGATGCCATAACGTGATACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR GCA 90 bp TTAATTTTTCTATTCCAGAGACTCAGTTTGGATGCCCGTGTGTGGGCTTCTAAATTGGGACAGGAGATATaGCCATCAGATGCACTTTCA +
Preference number: 4 (lower is better)
Translates to: LIFLFQRLSLDARVWASKLGQEI*PSDALS
Trigger: TGAAAGTGCATCTGATGGGCATATCTCCTGTCCCAA...TTTAGAAGCCCACACACGGGCATCCAAACTGAGTCTCTGGAATAGAAAAATTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR GCA 90 bp TTAATTTTTCTATTCCAGAGACTCAGTTTGGATGCCCGTGTGTGGGCTTCTAAATGGTGTTCTTCCTCTTaGAGCTTCTTCCTCAATTCC +
Preference number: 4 (lower is better)
Translates to: LIFLFQRLSLDARVWASKWCSSS*SFFLNS
Trigger: GGAATTGAGGAAGAAGCTGCAAGAGGAAGAACACCA...TTTAGAAGCCCACACACGGGCATCCAAACTGAGTCTCTGGAATAGAAAAATTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR GCA 90 bp AAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCTTAGTAAGTCAACACTaGAGCTTAATTCAGAGGATT +
Preference number: 4 (lower is better)
Translates to: KQMKVHFHGSSSICTTYPLVSQH*SLIQRI
Trigger: AATCCTCTGAATTAAGCTGCAGTGTTGACTTACTAA...GGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp TGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGTCAAAAATGCTTCACCGCTGACTaGATCAGTTTGGACTCCAGT +
Preference number: 4 (lower is better)
Translates to: CHQRYKHWQIGYLTVSQKCFTAD*ISLDSS
Trigger: ACTGGAGTCCAAACTGATGCAGTCAGCGGTGAAGCA...TTTTTGACTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp CTATTGATGGGTCCACTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGATTATACTGAGTAGTTaGATGAGGTCTTCTTTGGAT +
Preference number: 4 (lower is better)
Translates to: LLMGPLARSKTGTRNHALIILSS*MRSSLD
Trigger: ATCCAAAGAAGACCTCATCCAACTACTCAGTATAAT...CAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAGTGGACCCATCAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237172.12
CDS-3UTR CCA 90 bp AAATTTGGCTTGCAATTAGGAAATATGGGAGCCGGACTTGAAGAGCGTGTGATTACCACTTCCAATTGTTaGAGACGTTTCTTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: KFGLQLGNMGAGLEERVITTSNC*RRFFSL
Trigger: GAGACTGAAGAAACGTCTCCAACAATTGGAAGTGGT...AATCACACGCTCTTCAAGTCCGGCTCCCATATTTCCTAATTGCAAGCCAAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp ATAATTTTGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGAAGGACTACCTCTCCTaGGTGCCCTGGACTGGAATT +
Preference number: 4 (lower is better)
Translates to: IILPSEVQTLANRILNCEKDYLS*VPWTGI
Trigger: AATTCCAGTCCAGGGCACCCAGGAGAGGTAGTCCTT...CTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCAAAATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp ATAATTTTGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGGGACATGGCTCGTTCTaGGCCAAGAGTAGTATCTCC +
Preference number: 4 (lower is better)
Translates to: IILPSEVQTLANRILNCEGHGSF*AKSSIS
Trigger: GGAGATACTACTCTTGGCCCAGAACGAGCCATGTCC...CTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCAAAATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp TGGAGGACCTTAGTCATGATTGAGGGCTGTCCATTCAATAGGGATTCAGAGGTCCCTTACTGGTTAAACTaGTACATCTCCTTTTATGAA +
Preference number: 4 (lower is better)
Translates to: WRTLVMIEGCPFNRDSEVPYWLN*YISFYE
Trigger: TTCATAAAAGGAGATGTACCAGTTTAACCAGTAAGG...GACCTCTGAATCCCTATTGAATGGACAGCCCTCAATCATGACTAAGGTCCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR TCA 90 bp AATGTATCACGTTATGGCATCGATAAACATTTCTGTTCAAATGTGTGGATCTACGGACCAGCCAATAGCTaGAGTCATGCAGGAAACAGA +
Preference number: 4 (lower is better)
Translates to: NVSRYGIDKHFCSNVWIYGPANS*SHAGNR
Trigger: TCTGTTTCCTGCATGACTTCAGCTATTGGCTGGTCC...GTAGATCCACACATTTGAACAGAAATGTTTATCGATGCCATAACGTGATACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR TCA 90 bp AAATTTGGCTTGCAATTAGGAAATATGGGAGCCGGACTTGAAGAGCGTGTGATTAATTTCTGTTCCAGCTaGTCATACTCATCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: KFGLQLGNMGAGLEERVINFCSS*SYSSSV
Trigger: GACAGAAGATGAGTATGATCAGCTGGAACAGAAATT...AATCACACGCTCTTCAAGTCCGGCTCCCATATTTCCTAATTGCAAGCCAAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR TCA 90 bp AATGTATCACGTTATGGCATCGATAAACATTTCTGTTCAAATGTGTGGATCTACAGTTTGGACTCCAGTTaGCGTCACAGGAACATCCAC +
Preference number: 4 (lower is better)
Translates to: NVSRYGIDKHFCSNVWIYSLDSS*RHRNIH
Trigger: GTGGATGTTCCTGTGACGTCAACTGGAGTCCAAACT...GTAGATCCACACATTTGAACAGAAATGTTTATCGATGCCATAACGTGATACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR TCA 90 bp TTGCCTGATACACCACTTATTCTTGCTCTGCCACTGATTTGTAGTAGCTGTGTAGTTATTCTTGGTTTCTaGTTCCCTAAGGTAGGAATG +
Preference number: 4 (lower is better)
Translates to: LPDTPLILALPLICSSCVVILGF*FPKVGM
Trigger: CATTCCTACCTTAGGGAATCAGAAACCAAGAATAAC...TACACAGCTACTACAAATCAGTGGCAGAGCAAGAATAAGTGGTGTATCAGGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR TCA 90 bp TTAATTTTTCTATTCCAGAGACTCAGTTTGGATGCCCGTGTGTGGGCTTCTAAATTCTTGCTCTGCCACTaGTTTGTAGTAGCTGTGTAT +
Preference number: 4 (lower is better)
Translates to: LIFLFQRLSLDARVWASKFLLCH*FVVAVY
Trigger: ATACACAGCTACTACAAATCAGTGGCAGAGCAAGAA...TTTAGAAGCCCACACACGGGCATCCAAACTGAGTCTCTGGAATAGAAAAATTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR GCA 90 bp AATGTATCACGTTATGGCATCGATAAACATTTCTGTTCAAATGTGTGGATCTACCTAACTCGTATACGGTaGGCCTATGACACTTCTCGG +
Preference number: 4 (lower is better)
Translates to: NVSRYGIDKHFCSNVWIYLTRIR*AYDTSR
Trigger: CCGAGAAGTGTCATAGGCGCACCGTATACGAGTTAG...GTAGATCCACACATTTGAACAGAAATGTTTATCGATGCCATAACGTGATACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR GCA 90 bp TTAATTTTTCTATTCCAGAGACTCAGTTTGGATGCCCGTGTGTGGGCTTCTAAATGTACTTTCTGGCTTTaGAGGCCAAGTTGTTCAATG +
Preference number: 4 (lower is better)
Translates to: LIFLFQRLSLDARVWASKCTFWL*RPSCSM
Trigger: CATTGAACAACTTGGCCTGCAAAGCCAGAAAGTACA...TTTAGAAGCCCACACACGGGCATCCAAACTGAGTCTCTGGAATAGAAAAATTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR GCA 90 bp AAACCTCTTCCAGAGTCTCCTGCTTCTAAGTTTTACCTCTTGAATTTACCTCAGTCTTCCTCTGCCTTCTaGAGATTTTTGTTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: KPLPESPASKFYLLNLPQSSSAF*RFLLVS
Trigger: AGAGACCAACAAAAATCTGCAGAAGGCAGAGGAAGA...CTGAGGTAAATTCAAGAGGTAAAACTTAGAAGCAGGAGACTCTGGAAGAGGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR GCA 90 bp AAATTTGGCTTGCAATTAGGAAATATGGGAGCCGGACTTGAAGAGCGTGTGATTAGATTGAGAACCTCCTaGCCCATGTTTTTGTTCTTA +
Preference number: 4 (lower is better)
Translates to: KFGLQLGNMGAGLEERVIRLRTS*PMFLFL
Trigger: TAAGAACAAAAACATGGGGCAGGAGGTTCTCAATCT...AATCACACGCTCTTCAAGTCCGGCTCCCATATTTCCTAATTGCAAGCCAAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp TTAATTTTTCTATTCCAGAGACTCAGTTTGGATGCCCGTGTGTGGGCTTCTAAACACACACCCAGTATGTaGTTGGTTTACCATTTCATC +
Preference number: 4 (lower is better)
Translates to: LIFLFQRLSLDARVWASKHTPSM*LVYHFI
Trigger: GATGAAATGGTAAACCAAGCACATACTGGGTGTGTG...TTTAGAAGCCCACACACGGGCATCCAAACTGAGTCTCTGGAATAGAAAAATTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp AATGTATCACGTTATGGCATCGATAAACATTTCTGTTCAAATGTGTGGATCTACCTCTGCTGTAGCGCTTaGAAAGCTCCAACTCTTTGG +
Preference number: 4 (lower is better)
Translates to: NVSRYGIDKHFCSNVWIYLCCSA*KAPTLW
Trigger: CCAAAGAGTTGGAGCTTTCCAAGCGCTACAGCAGAG...GTAGATCCACACATTTGAACAGAAATGTTTATCGATGCCATAACGTGATACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp AAATTTGGCTTGCAATTAGGAAATATGGGAGCCGGACTTGAAGAGCGTGTGATTCCTCTTTCTCATCCATaGAATCCAAGACTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: KFGLQLGNMGAGLEERVIPLSHP*NPRLSH
Trigger: ATGAGAAAGTCTTGGATTCCATGGATGAGAAAGAGG...AATCACACGCTCTTCAAGTCCGGCTCCCATATTTCCTAATTGCAAGCCAAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp TTGCCTGATACACCACTTATTCTTGCTCTGCCACTGATTTGTAGTAGCTGTGTACCTCTTTCTCATCCATaGAATCCAAGACTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: LPDTPLILALPLICSSCVPLSHP*NPRLSH
Trigger: ATGAGAAAGTCTTGGATTCCATGGATGAGAAAGAGG...TACACAGCTACTACAAATCAGTGGCAGAGCAAGAATAAGTGGTGTATCAGGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp AAATTTGGCTTGCAATTAGGAAATATGGGAGCCGGACTTGAAGAGCGTGTGATTAACAGTCTGTTTTTCTaGGGTGACTTTGAGGATTGT +
Preference number: 4 (lower is better)
Translates to: KFGLQLGNMGAGLEERVINSLFF*GDFEDC
Trigger: ACAATCCTCAAAGTCACCCCAGAAAAACAGACTGTT...AATCACACGCTCTTCAAGTCCGGCTCCCATATTTCCTAATTGCAAGCCAAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CCA 90 bp AAACCTCTTCCAGAGTCTCCTGCTTCTAAGTTTTACCTCTTGAATTTACCTCAGCACCCAGTATGTGCTTaGTTTACCATTTCATCTGGA +
Preference number: 4 (lower is better)
Translates to: KPLPESPASKFYLLNLPQHPVCA*FTISSG
Trigger: TCCAGATGAAATGGTAAACCAAGCACATACTGGGTG...CTGAGGTAAATTCAAGAGGTAAAACTTAGAAGCAGGAGACTCTGGAAGAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR TCA 90 bp TGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGTCAAAAAATCTCTTCATGCTCTTaGGAAAACCTCGAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: CHQRYKHWQIGYLTVSQKISSCS*ENLEAL
Trigger: CAAGGCTTCGAGGTTTTCTCAAGAGCATGAAGAGAT...TTTTTGACTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR TCA 90 bp AAACCTCTTCCAGAGTCTCCTGCTTCTAAGTTTTACCTCTTGAATTTACCTCAGAATTTCTGTTCCAGCTaGTCATACTCATCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: KPLPESPASKFYLLNLPQNFCSS*SYSSSV
Trigger: GACAGAAGATGAGTATGATCAGCTGGAACAGAAATT...CTGAGGTAAATTCAAGAGGTAAAACTTAGAAGCAGGAGACTCTGGAAGAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR TCA 90 bp ATAATTTTGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGGATGATGCTTTCTTTTaGCATAGGAATGCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: IILPSEVQTLANRILNCEDDAFF*HRNAGG
Trigger: CCCACCCGCATTCCTATGTCAAAAGAAAGCATCATC...CTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCAAAATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR TCA 90 bp TTAATTTTTCTATTCCAGAGACTCAGTTTGGATGCCCGTGTGTGGGCTTCTAAAAATTTCAATGACCTGTaGGGAACTGAAAGCAAGCTA +
Preference number: 4 (lower is better)
Translates to: LIFLFQRLSLDARVWASKNFNDL*GTESKL
Trigger: TAGCTTGCTTTCAGTTCCTCACAGGTCATTGAAATT...TTTAGAAGCCCACACACGGGCATCCAAACTGAGTCTCTGGAATAGAAAAATTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR GCA 90 bp AAACCTCTTCCAGAGTCTCCTGCTTCTAAGTTTTACCTCTTGAATTTACCTCAGTTAAATGTAGCTGGGTaGACTCAGATTTACTCTTGC +
Preference number: 4 (lower is better)
Translates to: KPLPESPASKFYLLNLPQLNVAG*TQIYSC
Trigger: GCAAGAGTAAATCTGAGTGCACCCAGCTACATTTAA...CTGAGGTAAATTCAAGAGGTAAAACTTAGAAGCAGGAGACTCTGGAAGAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR GCA 90 bp AAATTTGGCTTGCAATTAGGAAATATGGGAGCCGGACTTGAAGAGCGTGTGATTTTCTTCAATCCCACCTaGCGAAGATTACTCATAATA +
Preference number: 4 (lower is better)
Translates to: KFGLQLGNMGAGLEERVIFFNPT*RRLLII
Trigger: TATTATGAGTAATCTTCGGCAGGTGGGATTGAAGAA...AATCACACGCTCTTCAAGTCCGGCTCCCATATTTCCTAATTGCAAGCCAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR GCA 90 bp AATGTATCACGTTATGGCATCGATAAACATTTCTGTTCAAATGTGTGGATCTACCATAGTGAGCTCATTTaGTGCTGGAGGATACCTGTC +
Preference number: 4 (lower is better)
Translates to: NVSRYGIDKHFCSNVWIYHSELI*CWRIPV
Trigger: GACAGGTATCCTCCAGCAGCAAATGAGCTCACTATG...GTAGATCCACACATTTGAACAGAAATGTTTATCGATGCCATAACGTGATACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp ATAATTTTGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGGGCTGTCACGTTTACTaGTCGGACAGTAATAACTGG +
Preference number: 4 (lower is better)
Translates to: IILPSEVQTLANRILNCEGCHVY*SDSNNW
Trigger: CCAGTTATTACTGTCCGACCAGTAAACGTGACAGCC...CTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCAAAATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR TCA 90 bp AATGTATCACGTTATGGCATCGATAAACATTTCTGTTCAAATGTGTGGATCTACAAGTCTGTCCAGCTCTaGAATCGGTTTCTCATAGAC +
Preference number: 4 (lower is better)
Translates to: NVSRYGIDKHFCSNVWIYKSVQL*NRFLID
Trigger: GTCTATGAGAAACCGATTTCAGAGCTGGACAGACTT...GTAGATCCACACATTTGAACAGAAATGTTTATCGATGCCATAACGTGATACATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR TCA 90 bp AATGTATCACGTTATGGCATCGATAAACATTTCTGTTCAAATGTGTGGATCTACCTCAGACCCTTTTCGTaGCCTTCCTCTTGTTATTTC +
Preference number: 4 (lower is better)
Translates to: NVSRYGIDKHFCSNVWIYLRPFS*PSSCYF
Trigger: GAAATAACAAGAGGAAGGTCACGAAAAGGGTCTGAG...GTAGATCCACACATTTGAACAGAAATGTTTATCGATGCCATAACGTGATACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR TCA 90 bp TGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGTCAAAAAATCTCCTCTAGTTGTTaGGAGAGGAAGTTAGCCTTA +
Preference number: 4 (lower is better)
Translates to: CHQRYKHWQIGYLTVSQKISSSC*ERKLAL
Trigger: TAAGGCTAACTTCCTCTCTCAACAACTAGAGGAGAT...TTTTTGACTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR TCA 90 bp ATAATTTTGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGGGAAGGATTTCCGTATaGATACAGCTGGCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: IILPSEVQTLANRILNCEGRISV*IQLAFL
Trigger: AAGAAACGCCAGCTGTATTCATACGGAAATCCTTCC...CTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCAAAATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR TCA 90 bp AAACCTCTTCCAGAGTCTCCTGCTTCTAAGTTTTACCTCTTGAATTTACCTCAGCCAAAGATACCCTCATaGAACACTCTCTTATCAAAA +
Preference number: 4 (lower is better)
Translates to: KPLPESPASKFYLLNLPQPKIPS*NTLLSK
Trigger: TTTTGATAAGAGAGTGTTTCATGAGGGTATCTTTGG...CTGAGGTAAATTCAAGAGGTAAAACTTAGAAGCAGGAGACTCTGGAAGAGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR GCA 90 bp ATAATTTTGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGAAGATTTTCCACTTCTaGCATGAGGCTAGAGTTTCC +
Preference number: 4 (lower is better)
Translates to: IILPSEVQTLANRILNCEKIFHF*HEARVS
Trigger: GGAAACTCTAGCCTCATGGCAGAAGTGGAAAATCTT...CTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCAAAATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR GCA 90 bp TTAATTTTTCTATTCCAGAGACTCAGTTTGGATGCCCGTGTGTGGGCTTCTAAATTAGTAAGTCAACACTaGAGCTTAATTCAGAGGATT +
Preference number: 4 (lower is better)
Translates to: LIFLFQRLSLDARVWASKLVSQH*SLIQRI
Trigger: AATCCTCTGAATTAAGCTGCAGTGTTGACTTACTAA...TTTAGAAGCCCACACACGGGCATCCAAACTGAGTCTCTGGAATAGAAAAATTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR GCA 90 bp TGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGTCAAAAAAGATTGAGAACCTCCTaGCCCATGTTTTTGTTCTTA +
Preference number: 4 (lower is better)
Translates to: CHQRYKHWQIGYLTVSQKRLRTS*PMFLFL
Trigger: TAAGAACAAAAACATGGGGCAGGAGGTTCTCAATCT...TTTTTGACTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp AATGTATCACGTTATGGCATCGATAAACATTTCTGTTCAAATGTGTGGATCTACTCTGCAGATTTTTGTTaGTCTCTTCTAGCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: NVSRYGIDKHFCSNVWIYSADFC*SLLAPR
Trigger: TCGAGGAGCTAGAAGAGACCAACAAAAATCTGCAGA...GTAGATCCACACATTTGAACAGAAATGTTTATCGATGCCATAACGTGATACATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp AATGTATCACGTTATGGCATCGATAAACATTTCTGTTCAAATGTGTGGATCTACACCACTTCCAATTGTTaGAGACGTTTCTTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: NVSRYGIDKHFCSNVWIYTTSNC*RRFFSL
Trigger: GAGACTGAAGAAACGTCTCCAACAATTGGAAGTGGT...GTAGATCCACACATTTGAACAGAAATGTTTATCGATGCCATAACGTGATACATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp TGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGTCAAAAAAACAGTCTGTTTTTCTaGGGTGACTTTGAGGATTGT +
Preference number: 4 (lower is better)
Translates to: CHQRYKHWQIGYLTVSQKNSLFF*GDFEDC
Trigger: ACAATCCTCAAAGTCACCCCAGAAAAACAGACTGTT...TTTTTGACTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCA
38% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp ATAATTTTGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGTTTCCGTACTGGAGTTaGAACAGTCTGTTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: IILPSEVQTLANRILNCEFPYWS*NSLFFW
Trigger: CCAGAAAAACAGACTGTTCCAACTCCAGTACGGAAA...CTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCAAAATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR GCA 90 bp TGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGTCAAAAACTAAATGACTCTGATTaGACCATCATCCTCATTGTT +
Preference number: 4 (lower is better)
Translates to: CHQRYKHWQIGYLTVSQKLNDSD*TIILIV
Trigger: AACAATGAGGATGATGGTGCAATCAGAGTCATTTAG...TTTTTGACTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp TGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGTCAAAAATTATTCTTGGCAATTTaGTGCTTGATCTCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: CHQRYKHWQIGYLTVSQKLFLAI*CLISSS
Trigger: ACTAGAGGAGATCAAGCACCAAATTGCCAAGAATAA...TTTTTGACTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp TGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGTCAAAAAGTTTACCATTTCATCTaGAGTTCATTCGTAACTGGT +
Preference number: 4 (lower is better)
Translates to: CHQRYKHWQIGYLTVSQKVYHFI*SSFVTG
Trigger: ACCAGTTACGAATGAACTCCAGATGAAATGGTAAAC...TTTTTGACTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp AATGTATCACGTTATGGCATCGATAAACATTTCTGTTCAAATGTGTGGATCTACTCTTATTGCCCTTACTaGTTAAACTGGTACATCTCC +
Preference number: 4 (lower is better)
Translates to: NVSRYGIDKHFCSNVWIYSYCPY*LNWYIS
Trigger: GGAGATGTACCAGTTTAACCAGTAAGGGCAATAAGA...GTAGATCCACACATTTGAACAGAAATGTTTATCGATGCCATAACGTGATACATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR TCA 90 bp ATAATTTTGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGAGGCATAACGTTTGGTaGTGGAATAATGGTTATTCT +
Preference number: 4 (lower is better)
Translates to: IILPSEVQTLANRILNCERHNVW*WNNGYS
Trigger: AGAATAACCATTATTCCATCACCAAACGTTATGCCT...CTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCAAAATTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR GCA 90 bp TGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGTCAAAAAAAGTTAGCCTTATCCTaGTCAGTTCTAAATTTCTGT +
Preference number: 4 (lower is better)
Translates to: CHQRYKHWQIGYLTVSQKKLALS*SVLNFC
Trigger: ACAGAAATTTAGAACTGAGCAGGATAAGGCTAACTT...TTTTTGACTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCA
36% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR GCA 90 bp AATGTATCACGTTATGGCATCGATAAACATTTCTGTTCAAATGTGTGGATCTACGCAAAAACTTCACATTaGCTGATACACCACTTATTC +
Preference number: 4 (lower is better)
Translates to: NVSRYGIDKHFCSNVWIYAKTSH*LIHHLF
Trigger: GAATAAGTGGTGTATCAGGCAATGTGAAGTTTTTGC...GTAGATCCACACATTTGAACAGAAATGTTTATCGATGCCATAACGTGATACATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp TGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGTCAAAAAATTATACTGAGTAGTTaGATGAGGTCTTCTTTGGAT +
Preference number: 4 (lower is better)
Translates to: CHQRYKHWQIGYLTVSQKIILSS*MRSSLD
Trigger: ATCCAAAGAAGACCTCATCCAACTACTCAGTATAAT...TTTTTGACTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCA
36% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp TGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGTCAAAAACAGAGGTACAAACATTaGCAAATAGGATACTTAACT +
Preference number: 4 (lower is better)
Translates to: CHQRYKHWQIGYLTVSQKQRYKH*QIGYLT
Trigger: AGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTG...TTTTTGACTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CCA 90 bp TGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGTCAAAAATTCTGTTCAAATGTGTaGATCTACAGCATTTTCTCT +
Preference number: 4 (lower is better)
Translates to: CHQRYKHWQIGYLTVSQKFCSNV*IYSIFS
Trigger: AGAGAAAATGCTGTAGATCCACACATTTGAACAGAA...TTTTTGACTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS CCA 90 bp CTGGGCAAGAATGGCATCTCGGTGCAGGACCCGCAGCACTTTCTCTaGCTCCGCAGACCCGTAATGAGCCTCCAGAACCTCAGGCTTGGT +
Preference number: 5 (lower is better)
Translates to: LGKNGISVQDPQHFL*LRRPVMSLQNLRLG
Trigger: ACCAAGCCTGAGGTTCTGGAGGCTCATTACGGGTCTGCGGAGCCAGAGAAAGTGCTGCGGGTCCTGCACCGAGATGCCATTCTTGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
CDS CCA 90 bp GCAGTGCTGTTCTCGTGGTCTGGTGTCACTCGAATATGCAGGGGCTaGCCCTGCTTTGGTGAAAGGACTACCTCTCCTGGGTGCCCTGGA +
Preference number: 5 (lower is better)
Translates to: AVLFSWSGVTRICRG*PCFGERTTSPGCPG
Trigger: TCCAGGGCACCCAGGAGAGGTAGTCCTTTCACCAAAGCAGGGCCAGCCCCTGCATATTCGAGTGACACCAGACCACGAGAACAGCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS GCA 90 bp CTGTTCTCGTGGTCTGGTGTCACTCGAATATGCAGGGGCTGGCCCTaGTTTGGTGAAAGGACTACCTCTCCTGGGTGCCCTGGACTGGAA +
Preference number: 5 (lower is better)
Translates to: LFSWSGVTRICRGWP*FGERTTSPGCPGLE
Trigger: TTCCAGTCCAGGGCACCCAGGAGAGGTAGTCCTTTCACCAAAGCAGGGCCAGCCCCTGCATATTCGAGTGACACCAGACCACGAGAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS TCA 90 bp GTGGTCTGGTGTCACTCGAATATGCAGGGGCTGGCCCTGCTTTGGTaGAAGGACTACCTCTCCTGGGTGCCCTGGACTGGAATTTGTTCG +
Preference number: 5 (lower is better)
Translates to: VVWCHSNMQGLALLW*KDYLSWVPWTGICS
Trigger: CGAACAAATTCCAGTCCAGGGCACCCAGGAGAGGTAGTCCTTTCACCAAAGCAGGGCCAGCCCCTGCATATTCGAGTGACACCAGACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS GCA 90 bp TCCAAAGTCGCAGTGCTGTTCTCGTGGTCTGGTGTCACTCGAATATaGAGGGGCTGGCCCTGCTTTGGTGAAAGGACTACCTCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: SKVAVLFSWSGVTRI*RGWPCFGERTTSPG
Trigger: CCCAGGAGAGGTAGTCCTTTCACCAAAGCAGGGCCAGCCCCTGCATATTCGAGTGACACCAGACCACGAGAACAGCACTGCGACTTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS CCA 90 bp GCTTTCATACCTTTTGACATAGGAATGCGGGTGGGTGTAGGCCGCTaGGATGACCCGTCTTGTCCTGACACTGACTGGGTTCCTCGAGCA +
Preference number: 5 (lower is better)
Translates to: AFIPFDIGMRVGVGR*DDPSCPDTDWVPRA
Trigger: TGCTCGAGGAACCCAGTCAGTGTCAGGACAAGACGGGTCATCCCAGCGGCCTACACCCACCCGCATTCCTATGTCAAAAGGTATGAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000498523.1
CDS-3UTR CAA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCTCCTGCTCCAGCAGGTaGGTGAAGTCGTCGCTCTTG +
Preference number: 5 (lower is better)
Translates to: FTFTAAVASAQHTPLATASCSSR*VKSSLL
Trigger: CAAGAGCGACGACTTCACCAACCTGCTGGAGCAGGA...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCGCCCTGGACTGGAATTaGTTCGGGGCCCTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: FTFTAAVASAQHTPLATAALDWN*FGALSP
Trigger: AGGAGAAAGGGCCCCGAACAAATTCCAGTCCAGGGC...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS CCA 90 bp ATGATGCTTTCTTTTGACATAGGAATGCGGGTGGGTGTAGGCCGCTaGGATGACCCGTCTTGTCCTGACACTGACTGGGTTCCTCGAGCA +
Preference number: 5 (lower is better)
Translates to: MMLSFDIGMRVGVGR*DDPSCPDTDWVPRA
Trigger: TGCTCGAGGAACCCAGTCAGTGTCAGGACAAGACGGGTCATCCCAGCGGCCTACACCCACCCGCATTCCTATGTCAAAAGAAAGCATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS CCA 90 bp GTTTCTCATAGACATCTTCTCCTATGGATTTCTCCTGGGCAAGAATaGCATCTCGGTGCAGGACCCGCAGCACTTTCTCTGGCTCCGCAG +
Preference number: 5 (lower is better)
Translates to: VSHRHLLLWISPGQE*HLGAGPAALSLAPQ
Trigger: CTGCGGAGCCAGAGAAAGTGCTGCGGGTCCTGCACCGAGATGCCATTCTTGCCCAGGAGAAATCCATAGGAGAAGATGTCTATGAGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
CDS-3UTR CAA 90 bp CTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGCTTCTAGGCAGCAAGCCCTGGACTGGAATTaGTTCGGGGCCCTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: LARSKTGTRNHALASRQQALDWN*FGALSP
Trigger: AGGAGAAAGGGCCCCGAACAAATTCCAGTCCAGGGC...TTGCTGCCTAGAAGCCAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp AAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCGGGGCTGGCCCTGCTTaGGTGAAAGGACTACCTCTC +
Preference number: 5 (lower is better)
Translates to: KQMKVHFHGSSSICTTYPGAGPA*VKGLPL
Trigger: GAGAGGTAGTCCTTTCACCAAAGCAGGGCCAGCCCC...GGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS CCA 90 bp GCTGGCGTTTCTTCCTCTGCTGCTTCACCGCTGACTGCATCAGTTTaGACTCCAGTTGACGTCACAGGAACATCCACCATTCTTCTTCCA +
Preference number: 5 (lower is better)
Translates to: AGVSSSAASPLTASV*TPVDVTGTSTILLP
Trigger: TGGAAGAAGAATGGTGGATGTTCCTGTGACGTCAACTGGAGTCCAAACTGATGCAGTCAGCGGTGAAGCAGCAGAGGAAGAAACGCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS-3UTR CAA 90 bp CTATTGATGGGTCCACTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGCCGATGATGGAGGGCTaGGGACAGGAGATATGCCCA +
Preference number: 5 (lower is better)
Translates to: LLMGPLARSKTGTRNHALPMMEG*GQEICP
Trigger: TGGGCATATCTCCTGTCCCAAGCCCTCCATCATCGG...CAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAGTGGACCCATCAATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237172.12
CDS-3UTR CAA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCCTTCAGATGTCGGGCTaGTTATCTCCAAAGTCGCAG +
Preference number: 5 (lower is better)
Translates to: FTFTAAVASAQHTPLATALQMSG*LSPKSQ
Trigger: CTGCGACTTTGGAGATAACAAGCCCGACATCTGAAG...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp TGGCACAAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATGCTCGTCACTTTGCTaGCACCAGGCCGTGAGGAGA +
Preference number: 5 (lower is better)
Translates to: WHKQMKVHFHGSSSICTTCSSLC*HQAVRR
Trigger: TCTCCTCACGGCCTGGTGCAAGCAAAGTGACGAGCA...TGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp CTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGCTTCTAGGCAGCAAATAGTGCTCGTCACTTaGCTTGCACCAGGCCGTGAG +
Preference number: 5 (lower is better)
Translates to: LARSKTGTRNHALASRQQIVLVT*LAPGRE
Trigger: CTCACGGCCTGGTGCAAGCAAAGTGACGAGCACTAT...TTGCTGCCTAGAAGCCAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS TCA 90 bp TTCCTCTGCTGCTTCACCGCTGACTGCATCAGTTTGGACTCCAGTTaGCGTCACAGGAACATCCACCATTCTTCTTCCATTCACACTGGG +
Preference number: 5 (lower is better)
Translates to: FLCCFTADCISLDSS*RHRNIHHSSSIHTG
Trigger: CCCAGTGTGAATGGAAGAAGAATGGTGGATGTTCCTGTGACGTCAACTGGAGTCCAAACTGATGCAGTCAGCGGTGAAGCAGCAGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS TCA 90 bp ACTGCAATCTCAGCTGGTGCTGCTGATGTAGACACCGTCATTATCTaGATAGGGGATGTGGGCCTGTCTGCAAATGCGCCTCTTCCACTT +
Preference number: 5 (lower is better)
Translates to: TAISAGAADVDTVII*IGDVGLSANAPLPL
Trigger: AAGTGGAAGAGGCGCATTTGCAGACAGGCCCACATCCCCTATTCAGATAATGACGGTGTCTACATCAGCAGCACCAGCTGAGATTGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS TCA 90 bp CATTTCCTGGGATTCGGGAGAAACTGCAATCTCAGCTGGTGCTGCTaGTGTAGACACCGTCATTATCTGAATAGGGGATGTGGGCCTGTC +
Preference number: 5 (lower is better)
Translates to: HFLGFGRNCNLSWCC*CRHRHYLNRGCGPV
Trigger: GACAGGCCCACATCCCCTATTCAGATAATGACGGTGTCTACATCAGCAGCACCAGCTGAGATTGCAGTTTCTCCCGAATCCCAGGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS GCA 90 bp CATAGACTGAGTCTCAGCTCGAGGCTCGAATTTGGTCAGATTTCCTaGTCCTGGGGCTGCCACTACTGGCTTTCCTGCTTTCATACCTTT +
Preference number: 5 (lower is better)
Translates to: HRLSLSSRLEFGQIS*SWGCHYWLSCFHTF
Trigger: AAAGGTATGAAAGCAGGAAAGCCAGTAGTGGCAGCCCCAGGAGCAGGAAATCTGACCAAATTCGAGCCTCGAGCTGAGACTCAGTCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000498523.1
CDS CCA 90 bp GTCTGTCCAGCTCTGAAATCGGTTTCTCATAGACATCTTCTCCTATaGATTTCTCCTGGGCAAGAATGGCATCTCGGTGCAGGACCCGCA +
Preference number: 5 (lower is better)
Translates to: VCPALKSVSHRHLLL*ISPGQEWHLGAGPA
Trigger: TGCGGGTCCTGCACCGAGATGCCATTCTTGCCCAGGAGAAATCCATAGGAGAAGATGTCTATGAGAAACCGATTTCAGAGCTGGACAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
CDS CCA 90 bp TTTTCTGGGGTGACTTTGAGGATTGTCCGTCCCATGGGCATTTCCTaGGATTCGGGAGAAACTGCAATCTCAGCTGGTGCTGCTGATGTA +
Preference number: 5 (lower is better)
Translates to: FSGVTLRIVRPMGIS*DSGETAISAGAADV
Trigger: TACATCAGCAGCACCAGCTGAGATTGCAGTTTCTCCCGAATCCCAGGAAATGCCCATGGGACGGACAATCCTCAAAGTCACCCCAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS-3UTR CAA 90 bp TGGCACAAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACAGAAGAACCCAGTGGCTaGTCTCACAGCCCAAGACAG +
Preference number: 5 (lower is better)
Translates to: WHKQMKVHFHGSSSICTTEEPSG*SHSPRQ
Trigger: CTGTCTTGGGCTGTGAGACAAGCCACTGGGTTCTTC...TGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237172.12
CDS-3UTR CAA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCGCTCGAGGCTCGAATTaGGTCAGATTTCCTGCTCCT +
Preference number: 5 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSARGSN*VRFPAP
Trigger: AGGAGCAGGAAATCTGACCAAATTCGAGCCTCGAGC...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS GCA 90 bp TGTAGTCAGTGTGTTTATGCTTCTCGTTCTCTAACTCGTATACGGTaGGCCTATGACACTTCTCGGCCAGCAACAGCTGCTCTAGCATGC +
Preference number: 5 (lower is better)
Translates to: CSQCVYASRSLTRIR*AYDTSRPATAALAC
Trigger: GCATGCTAGAGCAGCTGTTGCTGGCCGAGAAGTGTCATAGGCGCACCGTATACGAGTTAGAGAACGAGAAGCATAAACACACTGACTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
CDS-3UTR CAA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCGCTTTGCAGGCCAAGTaGTTCAATGTGCATTTGTCT +
Preference number: 5 (lower is better)
Translates to: FTFTAAVASAQHTPLATAALQAK*FNVHLS
Trigger: AGACAAATGCACATTGAACAACTTGGCCTGCAAAGC...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCGAAAACCTCGAAGCCTaGTGTTCAAAGTCCACTTCT +
Preference number: 5 (lower is better)
Translates to: FTFTAAVASAQHTPLATAENLEA*CSKSTS
Trigger: AGAAGTGGACTTTGAACACAAGGCTTCGAGGTTTTC...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCGTTAAGCCAACCAGCTaGAGTCTAAGTTGCCTATTG +
Preference number: 5 (lower is better)
Translates to: FTFTAAVASAQHTPLATAVKPTS*SLSCLL
Trigger: CAATAGGCAACTTAGACTCAAGCTGGTTGGCTTAAC...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCATGGTGTTCTTCCTCTaGCAGCTTCTTCCTCAATTC +
Preference number: 5 (lower is better)
Translates to: FTFTAAVASAQHTPLATAMVFFL*QLLPQF
Trigger: GAATTGAGGAAGAAGCTGCAAGAGGAAGAACACCAT...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCTTCGACCACTTCCAATaGTTGGAGACGTTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: FTFTAAVASAQHTPLATAFDHFQ*LETFLQ
Trigger: CTGAAGAAACGTCTCCAACAATTGGAAGTGGTCGAA...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp CTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGCTTCTAGGCAGCAACTTCAGATGTCGGGCTaGTTATCTCCAAAGTCGCAG +
Preference number: 5 (lower is better)
Translates to: LARSKTGTRNHALASRQQLQMSG*LSPKSQ
Trigger: CTGCGACTTTGGAGATAACAAGCCCGACATCTGAAG...TTGCTGCCTAGAAGCCAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp AAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCGCTCGAGGCTCGAATTaGGTCAGATTTCCTGCTCCT +
Preference number: 5 (lower is better)
Translates to: KQMKVHFHGSSSICTTYPARGSN*VRFPAP
Trigger: AGGAGCAGGAAATCTGACCAAATTCGAGCCTCGAGC...GGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS TCA 90 bp GTGGTGCTGCTGGCTGCAGATTTCTTCAGCTCTATTTTCATAGACTaGGTCTCAGCTCGAGGCTCGAATTTGGTCAGATTTCCTGCTCCT +
Preference number: 5 (lower is better)
Translates to: VVLLAADFFSSIFID*VSARGSNLVRFPAP
Trigger: AGGAGCAGGAAATCTGACCAAATTCGAGCCTCGAGCTGAGACTCAGTCTATGAAAATAGAGCTGAAGAAATCTGCAGCCAGCAGCACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000498523.1
CDS CCA 90 bp TTTCTCCTGAGTGATGGAGGGGCCGTTTTCCCTCTTTCTCATCCATaGAATCCAAGACTTTCTCATAGTGAGCTCATTTGCTGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: FLLSDGGAVFPLSHP*NPRLSHSELICCWR
Trigger: CCTCCAGCAGCAAATGAGCTCACTATGAGAAAGTCTTGGATTCCATGGATGAGAAAGAGGGAAAACGGCCCCTCCATCACTCAGGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS-3UTR CAA 90 bp AAATTTGGCTTGCAATTAGGAAATATGGGAGCCGGACTTGAAGAGCGTGTGATTTCCTGCTCCAGCAGGTaGGTGAAGTCGTCGCTCTTG +
Preference number: 5 (lower is better)
Translates to: KFGLQLGNMGAGLEERVISCSSR*VKSSLL
Trigger: CAAGAGCGACGACTTCACCAACCTGCTGGAGCAGGA...AATCACACGCTCTTCAAGTCCGGCTCCCATATTTCCTAATTGCAAGCCAAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCCCTATTGTGAGACTCTaGATTAGCCAGTTTAGCGTT +
Preference number: 5 (lower is better)
Translates to: FTFTAAVASAQHTPLATAPIVRL*ISQFSV
Trigger: AACGCTAAACTGGCTAATCAAGAGTCTCACAATAGG...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp CTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGCTTCTAGGCAGCAAGAAAGCTCCAACTCTTaGGTCAGATTGAGAACCTCC +
Preference number: 5 (lower is better)
Translates to: LARSKTGTRNHALASRQQESSNS*VRLRTS
Trigger: GGAGGTTCTCAATCTGACCAAAGAGTTGGAGCTTTC...TTGCTGCCTAGAAGCCAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp TGGCACAAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACACAGTTTGGACTCCAGTaGACGTCACAGGAACATCCA +
Preference number: 5 (lower is better)
Translates to: WHKQMKVHFHGSSSICTTQFGLQ*TSQEHP
Trigger: TGGATGTTCCTGTGACGTCAACTGGAGTCCAAACTG...TGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp TGGCACAAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATTTTCTGGGGTGACTTaGAGGATTGTCCGTCCCATG +
Preference number: 5 (lower is better)
Translates to: WHKQMKVHFHGSSSICTTFSGVT*RIVRPM
Trigger: CATGGGACGGACAATCCTCAAAGTCACCCCAGAAAA...TGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp AAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCTTTTCTGGGGTGACTTaGAGGATTGTCCGTCCCATG +
Preference number: 5 (lower is better)
Translates to: KQMKVHFHGSSSICTTYPFSGVT*RIVRPM
Trigger: CATGGGACGGACAATCCTCAAAGTCACCCCAGAAAA...GGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp AAATTTGGCTTGCAATTAGGAAATATGGGAGCCGGACTTGAAGAGCGTGTGATTTGCTCGTCACTTTGCTaGCACCAGGCCGTGAGGAGA +
Preference number: 5 (lower is better)
Translates to: KFGLQLGNMGAGLEERVICSSLC*HQAVRR
Trigger: TCTCCTCACGGCCTGGTGCAAGCAAAGTGACGAGCA...AATCACACGCTCTTCAAGTCCGGCTCCCATATTTCCTAATTGCAAGCCAAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp TGGAGGACCTTAGTCATGATTGAGGGCTGTCCATTCAATAGGGATTCAGAGGTCAGGATTGTGCCAGGATaGCCTGTGAGGGCAGTTTTT +
Preference number: 5 (lower is better)
Translates to: WRTLVMIEGCPFNRDSEVRIVPG*PVRAVF
Trigger: AAAAACTGCCCTCACAGGCAATCCTGGCACAATCCT...GACCTCTGAATCCCTATTGAATGGACAGCCCTCAATCATGACTAAGGTCCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS GCA 90 bp AGACACCGTCATTATCTGAATAGGGGATGTGGGCCTGTCTGCAAATaGGCCTCTTCCACTTTCTGGAGTCTTCTCTCTGGAAAATGTAGT +
Preference number: 5 (lower is better)
Translates to: RHRHYLNRGCGPVCK*ASSTFWSLLSGKCS
Trigger: ACTACATTTTCCAGAGAGAAGACTCCAGAAAGTGGAAGAGGCGCATTTGCAGACAGGCCCACATCCCCTATTCAGATAATGACGGTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS CCA 90 bp ATTGGAGTTGTATTTCCGTACTGGAGTTGGAACAGTCTGTTTTTCTaGGGTGACTTTGAGGATTGTCCGTCCCATGGGCATTTCCTGGGA +
Preference number: 5 (lower is better)
Translates to: IGVVFPYWSWNSLFF*GDFEDCPSHGHFLG
Trigger: TCCCAGGAAATGCCCATGGGACGGACAATCCTCAAAGTCACCCCAGAAAAACAGACTGTTCCAACTCCAGTACGGAAATACAACTCCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS-3UTR CAA 90 bp AAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCTGCACTTTCACCACCTaGGTTTCGAGATCTCATTCC +
Preference number: 5 (lower is better)
Translates to: KQMKVHFHGSSSICTTYPCTFTT*VSRSHS
Trigger: GGAATGAGATCTCGAAACCAAGGTGGTGAAAGTGCA...GGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237172.12
CDS-3UTR CAA 90 bp AAACCTCTTCCAGAGTCTCCTGCTTCTAAGTTTTACCTCTTGAATTTACCTCAGCCGATGATGGAGGGCTaGGGACAGGAGATATGCCCA +
Preference number: 5 (lower is better)
Translates to: KPLPESPASKFYLLNLPQPMMEG*GQEICP
Trigger: TGGGCATATCTCCTGTCCCAAGCCCTCCATCATCGG...CTGAGGTAAATTCAAGAGGTAAAACTTAGAAGCAGGAGACTCTGGAAGAGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CAA 90 bp AAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCGTTTTTAGGTGTCGTTaGACAGTTCCTGAGGCCATG +
Preference number: 5 (lower is better)
Translates to: KQMKVHFHGSSSICTTYPVFRCR*TVPEAM
Trigger: CATGGCCTCAGGAACTGTCAAACGACACCTAAAAAC...GGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000237172.12
CDS-3UTR CAA 90 bp TTAATTTTTCTATTCCAGAGACTCAGTTTGGATGCCCGTGTGTGGGCTTCTAAATCCTGCTCCAGCAGGTaGGTGAAGTCGTCGCTCTTG +
Preference number: 5 (lower is better)
Translates to: LIFLFQRLSLDARVWASKSCSSR*VKSSLL
Trigger: CAAGAGCGACGACTTCACCAACCTGCTGGAGCAGGA...TTTAGAAGCCCACACACGGGCATCCAAACTGAGTCTCTGGAATAGAAAAATTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CAA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCAAGTCCACTTCTAACTaGAGCAATTTCTGTCTGTCT +
Preference number: 5 (lower is better)
Translates to: FTFTAAVASAQHTPLATAKSTSN*SNFCLS
Trigger: AGACAGACAGAAATTGCTCAAGTTAGAAGTGGACTT...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCGTTAAGCCAACCAGCTaGAGTCTAAGTTGCCTATTG +
Preference number: 5 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSVKPTS*SLSCLL
Trigger: CAATAGGCAACTTAGACTCAAGCTGGTTGGCTTAAC...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp CTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGCTTCTAGGCAGCAATTCTGCAGATTTTTGTaGGTCTCTTCTAGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: LARSKTGTRNHALASRQQFCRFL*VSSSSS
Trigger: CGAGGAGCTAGAAGAGACCAACAAAAATCTGCAGAA...TTGCTGCCTAGAAGCCAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp TGGCACAAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACAGCCTTCTGCAGATTTTaGTTGGTCTCTTCTAGCTCC +
Preference number: 5 (lower is better)
Translates to: WHKQMKVHFHGSSSICTTAFCRF*LVSSSS
Trigger: GGAGCTAGAAGAGACCAACAAAAATCTGCAGAAGGC...TGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp TGGAGGACCTTAGTCATGATTGAGGGCTGTCCATTCAATAGGGATTCAGAGGTCGCCTTCTGCAGATTTTaGTTGGTCTCTTCTAGCTCC +
Preference number: 5 (lower is better)
Translates to: WRTLVMIEGCPFNRDSEVAFCRF*LVSSSS
Trigger: GGAGCTAGAAGAGACCAACAAAAATCTGCAGAAGGC...GACCTCTGAATCCCTATTGAATGGACAGCCCTCAATCATGACTAAGGTCCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CAA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCTCTTTAACTCGACTCTaGACCACCTCCAATTCATTT +
Preference number: 5 (lower is better)
Translates to: FTFTAAVASAQHTPLATASLTRL*TTSNSF
Trigger: AAATGAATTGGAGGTGGTCAAGAGTCGAGTTAAAGA...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp CTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGCTTCTAGGCAGCAAGACCACTTCCAATTGTaGGAGACGTTTCTTCAGTCT +
Preference number: 5 (lower is better)
Translates to: LARSKTGTRNHALASRQQDHFQL*ETFLQS
Trigger: AGACTGAAGAAACGTCTCCAACAATTGGAAGTGGTC...TTGCTGCCTAGAAGCCAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCTTCGACCACTTCCAATaGTTGGAGACGTTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSFDHFQ*LETFLQ
Trigger: CTGAAGAAACGTCTCCAACAATTGGAAGTGGTCGAA...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp AAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCGAAAGCTCCAACTCTTaGGTCAGATTGAGAACCTCC +
Preference number: 5 (lower is better)
Translates to: KQMKVHFHGSSSICTTYPESSNS*VRLRTS
Trigger: GGAGGTTCTCAATCTGACCAAAGAGTTGGAGCTTTC...GGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp TTAATTTTTCTATTCCAGAGACTCAGTTTGGATGCCCGTGTGTGGGCTTCTAAAGCCCTGGACTGGAATTaGTTCGGGGCCCTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: LIFLFQRLSLDARVWASKALDWN*FGALSP
Trigger: AGGAGAAAGGGCCCCGAACAAATTCCAGTCCAGGGC...TTTAGAAGCCCACACACGGGCATCCAAACTGAGTCTCTGGAATAGAAAAATTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CAA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCATATTGGCATTGGAGTaGTATTTCCGTACTGGAGTT +
Preference number: 5 (lower is better)
Translates to: FTFTAAVASAQHTPLATAILALE*YFRTGV
Trigger: AACTCCAGTACGGAAATACAACTCCAATGCCAATAT...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp AAATTTGGCTTGCAATTAGGAAATATGGGAGCCGGACTTGAAGAGCGTGTGATTATAGTGCTCGTCACTTaGCTTGCACCAGGCCGTGAG +
Preference number: 5 (lower is better)
Translates to: KFGLQLGNMGAGLEERVIIVLVT*LAPGRE
Trigger: CTCACGGCCTGGTGCAAGCAAAGTGACGAGCACTAT...AATCACACGCTCTTCAAGTCCGGCTCCCATATTTCCTAATTGCAAGCCAAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp AAACCTCTTCCAGAGTCTCCTGCTTCTAAGTTTTACCTCTTGAATTTACCTCAGGAAGAACCCAGTGGCTaGTCTCACAGCCCAAGACAG +
Preference number: 5 (lower is better)
Translates to: KPLPESPASKFYLLNLPQEEPSG*SHSPRQ
Trigger: CTGTCTTGGGCTGTGAGACAAGCCACTGGGTTCTTC...CTGAGGTAAATTCAAGAGGTAAAACTTAGAAGCAGGAGACTCTGGAAGAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CAA 90 bp CTATTGATGGGTCCACTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGTGGATGAGGTCTTCTTaGGATAACTCCAGGGATTTC +
Preference number: 5 (lower is better)
Translates to: LLMGPLARSKTGTRNHALWMRSS*DNSRDF
Trigger: GAAATCCCTGGAGTTATCCAAAGAAGACCTCATCCA...CAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAGTGGACCCATCAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237172.12
CDS-3UTR CAA 90 bp TGGAGGACCTTAGTCATGATTGAGGGCTGTCCATTCAATAGGGATTCAGAGGTCGCTTTGCAGGCCAAGTaGTTCAATGTGCATTTGTCT +
Preference number: 5 (lower is better)
Translates to: WRTLVMIEGCPFNRDSEVALQAK*FNVHLS
Trigger: AGACAAATGCACATTGAACAACTTGGCCTGCAAAGC...GACCTCTGAATCCCTATTGAATGGACAGCCCTCAATCATGACTAAGGTCCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CAA 90 bp AAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTGTACTTTCTGGCTTaGCAGGCCAAGTTGTTCAAT +
Preference number: 5 (lower is better)
Translates to: KQMKVHFHGSSSICTTYPLYFLA*QAKLFN
Trigger: ATTGAACAACTTGGCCTGCAAAGCCAGAAAGTACAG...GGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp TGGAGGACCTTAGTCATGATTGAGGGCTGTCCATTCAATAGGGATTCAGAGGTCGAAAACCTCGAAGCCTaGTGTTCAAAGTCCACTTCT +
Preference number: 5 (lower is better)
Translates to: WRTLVMIEGCPFNRDSEVENLEA*CSKSTS
Trigger: AGAAGTGGACTTTGAACACAAGGCTTCGAGGTTTTC...GACCTCTGAATCCCTATTGAATGGACAGCCCTCAATCATGACTAAGGTCCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CAA 90 bp AAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCATCTCTTCATGCTCTaGAGAAAACCTCGAAGCCTT +
Preference number: 5 (lower is better)
Translates to: KQMKVHFHGSSSICTTYPHLFML*RKPRSL
Trigger: AAGGCTTCGAGGTTTTCTCAAGAGCATGAAGAGATG...GGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp TGGCACAAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACACATCTCTTCATGCTCTaGAGAAAACCTCGAAGCCTT +
Preference number: 5 (lower is better)
Translates to: WHKQMKVHFHGSSSICTTHLFML*RKPRSL
Trigger: AAGGCTTCGAGGTTTTCTCAAGAGCATGAAGAGATG...TGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp CTATTGATGGGTCCACTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGCAGCTTGAGTCTAAGTaGCCTATTGTGAGACTCTTG +
Preference number: 5 (lower is better)
Translates to: LLMGPLARSKTGTRNHALQLESK*PIVRLL
Trigger: CAAGAGTCTCACAATAGGCAACTTAGACTCAAGCTG...CAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAGTGGACCCATCAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp AAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCAGCTTGAGTCTAAGTaGCCTATTGTGAGACTCTTG +
Preference number: 5 (lower is better)
Translates to: KQMKVHFHGSSSICTTYPQLESK*PIVRLL
Trigger: CAAGAGTCTCACAATAGGCAACTTAGACTCAAGCTG...GGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp TGGAGGACCTTAGTCATGATTGAGGGCTGTCCATTCAATAGGGATTCAGAGGTCGTTAAGCCAACCAGCTaGAGTCTAAGTTGCCTATTG +
Preference number: 5 (lower is better)
Translates to: WRTLVMIEGCPFNRDSEVVKPTS*SLSCLL
Trigger: CAATAGGCAACTTAGACTCAAGCTGGTTGGCTTAAC...GACCTCTGAATCCCTATTGAATGGACAGCCCTCAATCATGACTAAGGTCCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CAA 90 bp CTATTGATGGGTCCACTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGTTCTGCAGATTTTTGTaGGTCTCTTCTAGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: LLMGPLARSKTGTRNHALFCRFL*VSSSSS
Trigger: CGAGGAGCTAGAAGAGACCAACAAAAATCTGCAGAA...CAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAGTGGACCCATCAATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCTCTATTGCTTTATTCTaGGCAATTTGGTGCTTGATC +
Preference number: 5 (lower is better)
Translates to: FTFTAAVASAQHTPLATASIALF*AIWCLI
Trigger: GATCAAGCACCAAATTGCCAAGAATAAAGCAATAGA...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp TGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGTCAAAAAGGGGCTGGCCCTGCTTaGGTGAAAGGACTACCTCTC +
Preference number: 5 (lower is better)
Translates to: CHQRYKHWQIGYLTVSQKGAGPA*VKGLPL
Trigger: GAGAGGTAGTCCTTTCACCAAAGCAGGGCCAGCCCC...TTTTTGACTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CAA 90 bp CTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGCTTCTAGGCAGCAAATTTCCGTACTGGAGTaGGAACAGTCTGTTTTTCTG +
Preference number: 5 (lower is better)
Translates to: LARSKTGTRNHALASRQQISVLE*EQSVFL
Trigger: CAGAAAAACAGACTGTTCCAACTCCAGTACGGAAAT...TTGCTGCCTAGAAGCCAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp TTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTTAGCCACTGCCGTTATGATATTGGCATaGGAGTTGTATTTCCGTACT +
Preference number: 5 (lower is better)
Translates to: FTFTAAVASAQHTPLATAVMILA*ELYFRT
Trigger: AGTACGGAAATACAACTCCAATGCCAATATCATAAC...GGCAGTGGCTAAGGGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp TTAATTTTTCTATTCCAGAGACTCAGTTTGGATGCCCGTGTGTGGGCTTCTAAAATAGTGCTCGTCACTTaGCTTGCACCAGGCCGTGAG +
Preference number: 5 (lower is better)
Translates to: LIFLFQRLSLDARVWASKIVLVT*LAPGRE
Trigger: CTCACGGCCTGGTGCAAGCAAAGTGACGAGCACTAT...TTTAGAAGCCCACACACGGGCATCCAAACTGAGTCTCTGGAATAGAAAAATTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CAA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCCAGCAAGCAATAGTTTaGCTAATTTTGTTCCCCAGC +
Preference number: 5 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSQQAIV*LILFPS
Trigger: GCTGGGGAACAAAATTAGCAAAACTATTGCTTGCTG...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS CCA 90 bp TCCACTTTCTGGAGTCTTCTCTCTGGAAAATGTAGTAATTGTGACTaGGGACATGGCTCGTTCTGGGCCAAGAGTAGTATCTCCACTTTT +
Preference number: 5 (lower is better)
Translates to: STFWSLLSGKCSNCD*GHGSFWAKSSISTF
Trigger: AAAAGTGGAGATACTACTCTTGGCCCAGAACGAGCCATGTCCCCAGTCACAATTACTACATTTTCCAGAGAGAAGACTCCAGAAAGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS-3UTR CAA 90 bp AAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCAGAAATTGGAAGTTGTaGTATATCTCCCACCCAGAC +
Preference number: 5 (lower is better)
Translates to: KQMKVHFHGSSSICTTYPRNWKL*YISHPD
Trigger: GTCTGGGTGGGAGATATACAACAACTTCCAATTTCT...GGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237172.12
CDS-3UTR CAA 90 bp TGGCACAAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACACCCGATCAGCAGAAATaGGAAGTTGTTGTATATCTC +
Preference number: 5 (lower is better)
Translates to: WHKQMKVHFHGSSSICTTPDQQK*EVVVYL
Trigger: GAGATATACAACAACTTCCAATTTCTGCTGATCGGG...TGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237172.12
CDS-3UTR CAA 90 bp CTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGCTTCTAGGCAGCAATTGTTCAATGTGCATTaGTCTTTCATCCACCAGCAT +
Preference number: 5 (lower is better)
Translates to: LARSKTGTRNHALASRQQLFNVH*SFIHQH
Trigger: ATGCTGGTGGATGAAAGACAAATGCACATTGAACAA...TTGCTGCCTAGAAGCCAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCTTGTTCAATGTGCATTaGTCTTTCATCCACCAGCAT +
Preference number: 5 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSLFNVH*SFIHQH
Trigger: ATGCTGGTGGATGAAAGACAAATGCACATTGAACAA...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp AAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCCTGTCTTCTTTGGATTaGGAAGTAATGGCTTTGAGC +
Preference number: 5 (lower is better)
Translates to: KQMKVHFHGSSSICTTYPLSSLD*EVMALS
Trigger: GCTCAAAGCCATTACTTCCAAATCCAAAGAAGACAG...GGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp TGGCACAAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACACTGTCTTCTTTGGATTaGGAAGTAATGGCTTTGAGC +
Preference number: 5 (lower is better)
Translates to: WHKQMKVHFHGSSSICTTLSSLD*EVMALS
Trigger: GCTCAAAGCCATTACTTCCAAATCCAAAGAAGACAG...TGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTTGTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp TGGAGGACCTTAGTCATGATTGAGGGCTGTCCATTCAATAGGGATTCAGAGGTCCTGTCTTCTTTGGATTaGGAAGTAATGGCTTTGAGC +
Preference number: 5 (lower is better)
Translates to: WRTLVMIEGCPFNRDSEVLSSLD*EVMALS
Trigger: GCTCAAAGCCATTACTTCCAAATCCAAAGAAGACAG...GACCTCTGAATCCCTATTGAATGGACAGCCCTCAATCATGACTAAGGTCCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CAA 90 bp CTATTGATGGGTCCACTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGCCTATTGTGAGACTCTaGATTAGCCAGTTTAGCGTT +
Preference number: 5 (lower is better)
Translates to: LLMGPLARSKTGTRNHALPIVRL*ISQFSV
Trigger: AACGCTAAACTGGCTAATCAAGAGTCTCACAATAGG...CAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAGTGGACCCATCAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp CTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGCTTCTAGGCAGCAATTCGTGACCTTCCTCTaGTTATTTCTCTTTCCACTT +
Preference number: 5 (lower is better)
Translates to: LARSKTGTRNHALASRQQFVTFL*LFLFPL
Trigger: AAGTGGAAAGAGAAATAACAAGAGGAAGGTCACGAA...TTGCTGCCTAGAAGCCAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCTTCGTGACCTTCCTCTaGTTATTTCTCTTTCCACTT +
Preference number: 5 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSFVTFL*LFLFPL
Trigger: AAGTGGAAAGAGAAATAACAAGAGGAAGGTCACGAA...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCATATTGGCATTGGAGTaGTATTTCCGTACTGGAGTT +
Preference number: 5 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSILALE*YFRTGV
Trigger: AACTCCAGTACGGAAATACAACTCCAATGCCAATAT...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp AAACCTCTTCCAGAGTCTCCTGCTTCTAAGTTTTACCTCTTGAATTTACCTCAGAAGACTCTCACTGTGTaGCCCAGGCTGATCCTGAAC +
Preference number: 5 (lower is better)
Translates to: KPLPESPASKFYLLNLPQKTLTV*PRLILN
Trigger: GTTCAGGATCAGCCTGGGCAACACAGTGAGAGTCTT...CTGAGGTAAATTCAAGAGGTAAAACTTAGAAGCAGGAGACTCTGGAAGAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS CCA 90 bp ATTCTCTTCTGTAGCTTCTCAACTTCAAGTCTGAGCTCCTTACTATaGTGTTCTTCCTCTTGCAGCTTCTTCCTCAATTCCCTACACTGG +
Preference number: 5 (lower is better)
Translates to: ILFCSFSTSSLSSLL*CSSSCSFFLNSLHW
Trigger: CCAGTGTAGGGAATTGAGGAAGAAGCTGCAAGAGGAAGAACACCATAGTAAGGAGCTCAGACTTGAAGTTGAGAAGCTACAGAAGAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS-3UTR CAA 90 bp CTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGCTTCTAGGCAGCAAATGAGTGCAAAGGATTaGAGTTTAACAAGCTCATCT +
Preference number: 5 (lower is better)
Translates to: LARSKTGTRNHALASRQQMSAKD*SLTSSS
Trigger: AGATGAGCTTGTTAAACTCAAATCCTTTGCACTCAT...TTGCTGCCTAGAAGCCAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp CTATTGATGGGTCCACTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGAAGTCCACTTCTAACTaGAGCAATTTCTGTCTGTCT +
Preference number: 5 (lower is better)
Translates to: LLMGPLARSKTGTRNHALKSTSN*SNFCLS
Trigger: AGACAGACAGAAATTGCTCAAGTTAGAAGTGGACTT...CAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAGTGGACCCATCAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp AAATTTGGCTTGCAATTAGGAAATATGGGAGCCGGACTTGAAGAGCGTGTGATTGCCTTCTGCAGATTTTaGTTGGTCTCTTCTAGCTCC +
Preference number: 5 (lower is better)
Translates to: KFGLQLGNMGAGLEERVIAFCRF*LVSSSS
Trigger: GGAGCTAGAAGAGACCAACAAAAATCTGCAGAAGGC...AATCACACGCTCTTCAAGTCCGGCTCCCATATTTCCTAATTGCAAGCCAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp CTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGGCTTCTAGGCAGCAACACTCAGATTTACTCTaGCTAAATGCTTCTTCCAAT +
Preference number: 5 (lower is better)
Translates to: LARSKTGTRNHALASRQQHSDLL*LNASSN
Trigger: ATTGGAAGAAGCATTTAGCAAGAGTAAATCTGAGTG...TTGCTGCCTAGAAGCCAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp AAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCTCTTTAACTCGACTCTaGACCACCTCCAATTCATTT +
Preference number: 5 (lower is better)
Translates to: KQMKVHFHGSSSICTTYPSLTRL*TTSNSF
Trigger: AAATGAATTGGAGGTGGTCAAGAGTCGAGTTAAAGA...GGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp AAACCTCTTCCAGAGTCTCCTGCTTCTAAGTTTTACCTCTTGAATTTACCTCAGCTTCAGATGTCGGGCTaGTTATCTCCAAAGTCGCAG +
Preference number: 5 (lower is better)
Translates to: KPLPESPASKFYLLNLPQLQMSG*LSPKSQ
Trigger: CTGCGACTTTGGAGATAACAAGCCCGACATCTGAAG...CTGAGGTAAATTCAAGAGGTAAAACTTAGAAGCAGGAGACTCTGGAAGAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CAA 90 bp CTGATGAGGAAACAGGCTCAGATGGGTCTATTGATGGGTCCACTTGCTAGAAGCGTTATGATATTGGCATaGGAGTTGTATTTCCGTACT +
Preference number: 5 (lower is better)
Translates to: LMRKQAQMGLLMGPLARSVMILA*ELYFRT
Trigger: AGTACGGAAATACAACTCCAATGCCAATATCATAAC...GCTTCTAGCAAGTGGACCCATCAATAGACCCATCTGAGCCTGTTTCCTCATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp AATGTATCACGTTATGGCATCGATAAACATTTCTGTTCAAATGTGTGGATCTACTGCTCGTCACTTTGCTaGCACCAGGCCGTGAGGAGA +
Preference number: 5 (lower is better)
Translates to: NVSRYGIDKHFCSNVWIYCSSLC*HQAVRR
Trigger: TCTCCTCACGGCCTGGTGCAAGCAAAGTGACGAGCA...GTAGATCCACACATTTGAACAGAAATGTTTATCGATGCCATAACGTGATACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CAA 90 bp TGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGTCAAAAATTCCAGAGACTCAGTTaGGATGCCCGTGTGTGGGCT +
Preference number: 5 (lower is better)
Translates to: CHQRYKHWQIGYLTVSQKFQRLS*DARVWA
Trigger: AGCCCACACACGGGCATCCAAACTGAGTCTCTGGAA...TTTTTGACTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CAA 90 bp TGGAGGACCTTAGTCATGATTGAGGGCTGTCCATTCAATAGGGATTCAGAGGTCCATGTGTCACTCAGATaGCATTTGGGTTTAAACAGA +
Preference number: 5 (lower is better)
Translates to: WRTLVMIEGCPFNRDSEVHVSLR*HLGLNR
Trigger: TCTGTTTAAACCCAAATGCAATCTGAGTGACACATG...GACCTCTGAATCCCTATTGAATGGACAGCCCTCAATCATGACTAAGGTCCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS TCA 90 bp TCCACGGGTTTCTTCAATCCCACCTGCCGAAGATTACTCATAATATaGTTTTCTTCCTGGAAGGATTTCCGTATGAATACAGCTGGCGTT +
Preference number: 5 (lower is better)
Translates to: STGFFNPTCRRLLII*FSSWKDFRMNTAGV
Trigger: AACGCCAGCTGTATTCATACGGAAATCCTTCCAGGAAGAAAATCATATTATGAGTAATCTTCGGCAGGTGGGATTGAAGAAACCCGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS GCA 90 bp TTCTCAACTTCAAGTCTGAGCTCCTTACTATGGTGTTCTTCCTCTTaGAGCTTCTTCCTCAATTCCCTACACTGGGATTCAGTTTTAGTG +
Preference number: 5 (lower is better)
Translates to: FSTSSLSSLLWCSSS*SFFLNSLHWDSVLV
Trigger: CACTAAAACTGAATCCCAGTGTAGGGAATTGAGGAAGAAGCTGCAAGAGGAAGAACACCATAGTAAGGAGCTCAGACTTGAAGTTGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS GCA 90 bp TGTCCATTCAATAGGGATTCAGAGGTCGTACACACACCCAGTATGTaGTTGGTTTACCATTTCATCTGGAGTTCATTCGTAACTGGTGAA +
Preference number: 5 (lower is better)
Translates to: CPFNRDSEVVHTPSM*LVYHFIWSSFVTGE
Trigger: TTCACCAGTTACGAATGAACTCCAGATGAAATGGTAAACCAAGCACATACTGGGTGTGTGTACGACCTCTGAATCCCTATTGAATGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS CCA 90 bp GTCCTCTGTGGTTATGATATTGGCATTGGAGTTGTATTTCCGTACTaGAGTTGGAACAGTCTGTTTTTCTGGGGTGACTTTGAGGATTGT +
Preference number: 5 (lower is better)
Translates to: VLCGYDIGIGVVFPY*SWNSLFFWGDFEDC
Trigger: ACAATCCTCAAAGTCACCCCAGAAAAACAGACTGTTCCAACTCCAGTACGGAAATACAACTCCAATGCCAATATCATAACCACAGAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS-3UTR CAA 90 bp CTATTGATGGGTCCACTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGATGAGTGCAAAGGATTaGAGTTTAACAAGCTCATCT +
Preference number: 5 (lower is better)
Translates to: LLMGPLARSKTGTRNHALMSAKD*SLTSSS
Trigger: AGATGAGCTTGTTAAACTCAAATCCTTTGCACTCAT...CAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAGTGGACCCATCAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp AAATTTGGCTTGCAATTAGGAAATATGGGAGCCGGACTTGAAGAGCGTGTGATTGAAAACCTCGAAGCCTaGTGTTCAAAGTCCACTTCT +
Preference number: 5 (lower is better)
Translates to: KFGLQLGNMGAGLEERVIENLEA*CSKSTS
Trigger: AGAAGTGGACTTTGAACACAAGGCTTCGAGGTTTTC...AATCACACGCTCTTCAAGTCCGGCTCCCATATTTCCTAATTGCAAGCCAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp AAATTTGGCTTGCAATTAGGAAATATGGGAGCCGGACTTGAAGAGCGTGTGATTATGGTGTTCTTCCTCTaGCAGCTTCTTCCTCAATTC +
Preference number: 5 (lower is better)
Translates to: KFGLQLGNMGAGLEERVIMVFFL*QLLPQF
Trigger: GAATTGAGGAAGAAGCTGCAAGAGGAAGAACACCAT...AATCACACGCTCTTCAAGTCCGGCTCCCATATTTCCTAATTGCAAGCCAAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp TTGCCTGATACACCACTTATTCTTGCTCTGCCACTGATTTGTAGTAGCTGTGTAATGGTGTTCTTCCTCTaGCAGCTTCTTCCTCAATTC +
Preference number: 5 (lower is better)
Translates to: LPDTPLILALPLICSSCVMVFFL*QLLPQF
Trigger: GAATTGAGGAAGAAGCTGCAAGAGGAAGAACACCAT...TACACAGCTACTACAAATCAGTGGCAGAGCAAGAATAAGTGGTGTATCAGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CAA 90 bp CTATTGATGGGTCCACTTGCTAGAAGCAAAACTGGAACTAGAAACCACGCCCTGCACTCAGATTTACTCTaGCTAAATGCTTCTTCCAAT +
Preference number: 5 (lower is better)
Translates to: LLMGPLARSKTGTRNHALHSDLL*LNASSN
Trigger: ATTGGAAGAAGCATTTAGCAAGAGTAAATCTGAGTG...CAGGGCGTGGTTTCTAGTTCCAGTTTTGCTTCTAGCAAGTGGACCCATCAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp AAATTTGGCTTGCAATTAGGAAATATGGGAGCCGGACTTGAAGAGCGTGTGATTGACCACTTCCAATTGTaGGAGACGTTTCTTCAGTCT +
Preference number: 5 (lower is better)
Translates to: KFGLQLGNMGAGLEERVIDHFQL*ETFLQS
Trigger: AGACTGAAGAAACGTCTCCAACAATTGGAAGTGGTC...AATCACACGCTCTTCAAGTCCGGCTCCCATATTTCCTAATTGCAAGCCAAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp AAACAGATGAAGGTTCACTTTCACGGCAGCAGTAGCATCTGCACAACATACCCCTCTATTGCTTTATTCTaGGCAATTTGGTGCTTGATC +
Preference number: 5 (lower is better)
Translates to: KQMKVHFHGSSSICTTYPSIALF*AIWCLI
Trigger: GATCAAGCACCAAATTGCCAAGAATAAAGCAATAGA...GGGGTATGTTGTGCAGATGCTACTGCTGCCGTGAAAGTGAACCTTCATCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000370020.1
CDS-3UTR CAA 90 bp TGGAGGACCTTAGTCATGATTGAGGGCTGTCCATTCAATAGGGATTCAGAGGTCGTTATGATATTGGCATaGGAGTTGTATTTCCGTACT +
Preference number: 5 (lower is better)
Translates to: WRTLVMIEGCPFNRDSEVVMILA*ELYFRT
Trigger: AGTACGGAAATACAACTCCAATGCCAATATCATAAC...GACCTCTGAATCCCTATTGAATGGACAGCCCTCAATCATGACTAAGGTCCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CAA 90 bp TTGCCTGATACACCACTTATTCTTGCTCTGCCACTGATTTGTAGTAGCTGTGTAACACCCAGTATGTGCTaGGTTTACCATTTCATCTGG +
Preference number: 5 (lower is better)
Translates to: LPDTPLILALPLICSSCVTPSMC*VYHFIW
Trigger: CCAGATGAAATGGTAAACCAAGCACATACTGGGTGT...TACACAGCTACTACAAATCAGTGGCAGAGCAAGAATAAGTGGTGTATCAGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS CCA 90 bp GAGGGAAAGCAGCTTCTTCTCCCTGAAATCCCGATCAGCAGAAATTaGAAGTTGTTGTATATCTCCCACCCAGACTTTTGTTTAAAAGTT +
Preference number: 5 (lower is better)
Translates to: EGKQLLLPEIPISRN*KLLYISHPDFCLKV
Trigger: AACTTTTAAACAAAAGTCTGGGTGGGAGATATACAACAACTTCCAATTTCTGCTGATCGGGATTTCAGGGAGAAGAAGCTGCTTTCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237172.12
CDS CCA 90 bp CTATGGTGTTCTTCCTCTTGCAGCTTCTTCCTCAATTCCCTACACTaGGATTCAGTTTTAGTGATCTCCTCATCTTTACCTTCCATTTCA +
Preference number: 5 (lower is better)
Translates to: LWCSSSCSFFLNSLH*DSVLVISSSLPSIS
Trigger: TGAAATGGAAGGTAAAGATGAGGAGATCACTAAAACTGAATCCCAGTGTAGGGAATTGAGGAAGAAGCTGCAAGAGGAAGAACACCATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS-3UTR CAA 90 bp TTAATTTTTCTATTCCAGAGACTCAGTTTGGATGCCCGTGTGTGGGCTTCTAAATGGATGAGGTCTTCTTaGGATAACTCCAGGGATTTC +
Preference number: 5 (lower is better)
Translates to: LIFLFQRLSLDARVWASKWMRSS*DNSRDF
Trigger: GAAATCCCTGGAGTTATCCAAAGAAGACCTCATCCA...TTTAGAAGCCCACACACGGGCATCCAAACTGAGTCTCTGGAATAGAAAAATTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CAA 90 bp AAACCTCTTCCAGAGTCTCCTGCTTCTAAGTTTTACCTCTTGAATTTACCTCAGCAGCTTGAGTCTAAGTaGCCTATTGTGAGACTCTTG +
Preference number: 5 (lower is better)
Translates to: KPLPESPASKFYLLNLPQQLESK*PIVRLL
Trigger: CAAGAGTCTCACAATAGGCAACTTAGACTCAAGCTG...CTGAGGTAAATTCAAGAGGTAAAACTTAGAAGCAGGAGACTCTGGAAGAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CAA 90 bp AAACCTCTTCCAGAGTCTCCTGCTTCTAAGTTTTACCTCTTGAATTTACCTCAGTTCTGCAGATTTTTGTaGGTCTCTTCTAGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: KPLPESPASKFYLLNLPQFCRFL*VSSSSS
Trigger: CGAGGAGCTAGAAGAGACCAACAAAAATCTGCAGAA...CTGAGGTAAATTCAAGAGGTAAAACTTAGAAGCAGGAGACTCTGGAAGAGGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CAA 90 bp AAACCTCTTCCAGAGTCTCCTGCTTCTAAGTTTTACCTCTTGAATTTACCTCAGTTCGACCACTTCCAATaGTTGGAGACGTTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: KPLPESPASKFYLLNLPQFDHFQ*LETFLQ
Trigger: CTGAAGAAACGTCTCCAACAATTGGAAGTGGTCGAA...CTGAGGTAAATTCAAGAGGTAAAACTTAGAAGCAGGAGACTCTGGAAGAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CAA 90 bp TGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGTCAAAAATTTTCTGGGGTGACTTaGAGGATTGTCCGTCCCATG +
Preference number: 5 (lower is better)
Translates to: CHQRYKHWQIGYLTVSQKFSGVT*RIVRPM
Trigger: CATGGGACGGACAATCCTCAAAGTCACCCCAGAAAA...TTTTTGACTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CAA 90 bp AAACCTCTTCCAGAGTCTCCTGCTTCTAAGTTTTACCTCTTGAATTTACCTCAGTTTCATCCAAGGTTTTaGGCCCAGAACACCAGAAAG +
Preference number: 5 (lower is better)
Translates to: KPLPESPASKFYLLNLPQFHPRF*AQNTRK
Trigger: CTTTCTGGTGTTCTGGGCCAAAAACCTTGGATGAAA...CTGAGGTAAATTCAAGAGGTAAAACTTAGAAGCAGGAGACTCTGGAAGAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS GCA 90 bp TTTACCTTCCATTTCAAGCACACGCTTTCGAAGATTTTCCACTTCTaGCATGAGGCTAGAGTTTCCACATTCTCCTTTGGCAATTTTATC +
Preference number: 5 (lower is better)
Translates to: FTFHFKHTLSKIFHF*HEARVSTFSFGNFI
Trigger: GATAAAATTGCCAAAGGAGAATGTGGAAACTCTAGCCTCATGGCAGAAGTGGAAAATCTTCGAAAGCGTGTGCTTGAAATGGAAGGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS-3UTR CAA 90 bp AATGTATCACGTTATGGCATCGATAAACATTTCTGTTCAAATGTGTGGATCTACCAGTTTGGACTCCAGTaGACGTCACAGGAACATCCA +
Preference number: 5 (lower is better)
Translates to: NVSRYGIDKHFCSNVWIYQFGLQ*TSQEHP
Trigger: TGGATGTTCCTGTGACGTCAACTGGAGTCCAAACTG...GTAGATCCACACATTTGAACAGAAATGTTTATCGATGCCATAACGTGATACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CAA 90 bp TTGCCTGATACACCACTTATTCTTGCTCTGCCACTGATTTGTAGTAGCTGTGTAATATTGGCATTGGAGTaGTATTTCCGTACTGGAGTT +
Preference number: 5 (lower is better)
Translates to: LPDTPLILALPLICSSCVILALE*YFRTGV
Trigger: AACTCCAGTACGGAAATACAACTCCAATGCCAATAT...TACACAGCTACTACAAATCAGTGGCAGAGCAAGAATAAGTGGTGTATCAGGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CAA 90 bp TTGCCTGATACACCACTTATTCTTGCTCTGCCACTGATTTGTAGTAGCTGTGTACATGTTGAAAATGATTaGCCAATTCCCCAAGGTGTA +
Preference number: 5 (lower is better)
Translates to: LPDTPLILALPLICSSCVHVEND*PIPQGV
Trigger: TACACCTTGGGGAATTGGCAAATCATTTTCAACATG...TACACAGCTACTACAAATCAGTGGCAGAGCAAGAATAAGTGGTGTATCAGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CAA 90 bp AAACCTCTTCCAGAGTCTCCTGCTTCTAAGTTTTACCTCTTGAATTTACCTCAGACTGCAGTAGCGCTGTaGTCTCTATTAATGCTTAGA +
Preference number: 5 (lower is better)
Translates to: KPLPESPASKFYLLNLPQTAVAL*SLLMLR
Trigger: TCTAAGCATTAATAGAGACAACAGCGCTACTGCAGT...CTGAGGTAAATTCAAGAGGTAAAACTTAGAAGCAGGAGACTCTGGAAGAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS CCA 90 bp TCATCTTCTGTCTTCATCAAATCCCCTTCGACCACTTCCAATTGTTaGAGACGTTTCTTCAGTCTCTCAATTTCAAGTGTTAGTTCCTTA +
Preference number: 5 (lower is better)
Translates to: SSSVFIKSPSTTSNC*RRFFSLSISSVSSL
Trigger: TAAGGAACTAACACTTGAAATTGAGAGACTGAAGAAACGTCTCCAACAATTGGAAGTGGTCGAAGGGGATTTGATGAAGACAGAAGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS-3UTR CAA 90 bp ATAATTTTGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGGTTTTTAGGTGTCGTTaGACAGTTCCTGAGGCCATG +
Preference number: 5 (lower is better)
Translates to: IILPSEVQTLANRILNCEVFRCR*TVPEAM
Trigger: CATGGCCTCAGGAACTGTCAAACGACACCTAAAAAC...CTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCAAAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CAA 90 bp TGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGTCAAAAACATCTCTTCATGCTCTaGAGAAAACCTCGAAGCCTT +
Preference number: 5 (lower is better)
Translates to: CHQRYKHWQIGYLTVSQKHLFML*RKPRSL
Trigger: AAGGCTTCGAGGTTTTCTCAAGAGCATGAAGAGATG...TTTTTGACTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CAA 90 bp AAACCTCTTCCAGAGTCTCCTGCTTCTAAGTTTTACCTCTTGAATTTACCTCAGTCTTTAACTCGACTCTaGACCACCTCCAATTCATTT +
Preference number: 5 (lower is better)
Translates to: KPLPESPASKFYLLNLPQSLTRL*TTSNSF
Trigger: AAATGAATTGGAGGTGGTCAAGAGTCGAGTTAAAGA...CTGAGGTAAATTCAAGAGGTAAAACTTAGAAGCAGGAGACTCTGGAAGAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CAA 90 bp AAACCTCTTCCAGAGTCTCCTGCTTCTAAGTTTTACCTCTTGAATTTACCTCAGTTCGTGACCTTCCTCTaGTTATTTCTCTTTCCACTT +
Preference number: 5 (lower is better)
Translates to: KPLPESPASKFYLLNLPQFVTFL*LFLFPL
Trigger: AAGTGGAAAGAGAAATAACAAGAGGAAGGTCACGAA...CTGAGGTAAATTCAAGAGGTAAAACTTAGAAGCAGGAGACTCTGGAAGAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CAA 90 bp TGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGTCAAAAAGACCACTTCCAATTGTaGGAGACGTTTCTTCAGTCT +
Preference number: 5 (lower is better)
Translates to: CHQRYKHWQIGYLTVSQKDHFQL*ETFLQS
Trigger: AGACTGAAGAAACGTCTCCAACAATTGGAAGTGGTC...TTTTTGACTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CAA 90 bp AATGTATCACGTTATGGCATCGATAAACATTTCTGTTCAAATGTGTGGATCTACGAAAGCTCCAACTCTTaGGTCAGATTGAGAACCTCC +
Preference number: 5 (lower is better)
Translates to: NVSRYGIDKHFCSNVWIYESSNS*VRLRTS
Trigger: GGAGGTTCTCAATCTGACCAAAGAGTTGGAGCTTTC...GTAGATCCACACATTTGAACAGAAATGTTTATCGATGCCATAACGTGATACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS TCA 90 bp ATTGCTTTATTCTTGGCAATTTGGTGCTTGATCTCCTCTAGTTGTTaGGAGAGGAAGTTAGCCTTATCCTGCTCAGTTCTAAATTTCTGT +
Preference number: 5 (lower is better)
Translates to: IALFLAIWCLISSSC*ERKLALSCSVLNFC
Trigger: ACAGAAATTTAGAACTGAGCAGGATAAGGCTAACTTCCTCTCTCAACAACTAGAGGAGATCAAGCACCAAATTGCCAAGAATAAAGCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS-3UTR CAA 90 bp ATAATTTTGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGCTGTACTTTCTGGCTTaGCAGGCCAAGTTGTTCAAT +
Preference number: 5 (lower is better)
Translates to: IILPSEVQTLANRILNCELYFLA*QAKLFN
Trigger: ATTGAACAACTTGGCCTGCAAAGCCAGAAAGTACAG...CTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCAAAATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CAA 90 bp TGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGTCAAAAACCTATTGTGAGACTCTaGATTAGCCAGTTTAGCGTT +
Preference number: 5 (lower is better)
Translates to: CHQRYKHWQIGYLTVSQKPIVRL*ISQFSV
Trigger: AACGCTAAACTGGCTAATCAAGAGTCTCACAATAGG...TTTTTGACTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CAA 90 bp TTAATTTTTCTATTCCAGAGACTCAGTTTGGATGCCCGTGTGTGGGCTTCTAAACACTCAGATTTACTCTaGCTAAATGCTTCTTCCAAT +
Preference number: 5 (lower is better)
Translates to: LIFLFQRLSLDARVWASKHSDLL*LNASSN
Trigger: ATTGGAAGAAGCATTTAGCAAGAGTAAATCTGAGTG...TTTAGAAGCCCACACACGGGCATCCAAACTGAGTCTCTGGAATAGAAAAATTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CAA 90 bp AAACCTCTTCCAGAGTCTCCTGCTTCTAAGTTTTACCTCTTGAATTTACCTCAGCTTTTGGCACATAGATaGAATTGCTCTTGCTACATA +
Preference number: 5 (lower is better)
Translates to: KPLPESPASKFYLLNLPQLLAHR*NCSCYI
Trigger: TATGTAGCAAGAGCAATTCAATCTATGTGCCAAAAG...CTGAGGTAAATTCAAGAGGTAAAACTTAGAAGCAGGAGACTCTGGAAGAGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CAA 90 bp AATGTATCACGTTATGGCATCGATAAACATTTCTGTTCAAATGTGTGGATCTACATTTCCGTACTGGAGTaGGAACAGTCTGTTTTTCTG +
Preference number: 5 (lower is better)
Translates to: NVSRYGIDKHFCSNVWIYISVLE*EQSVFL
Trigger: CAGAAAAACAGACTGTTCCAACTCCAGTACGGAAAT...GTAGATCCACACATTTGAACAGAAATGTTTATCGATGCCATAACGTGATACATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS CCA 90 bp AGGTCTTTGGTTAAGTTCTTTTCTTTCTCCAGATTTAAATGTAGCTaGGTGCACTCAGATTTACTCTTGCTAAATGCTTCTTCCAATTTC +
Preference number: 5 (lower is better)
Translates to: RSLVKFFSFSRFKCS*VHSDLLLLNASSNF
Trigger: GAAATTGGAAGAAGCATTTAGCAAGAGTAAATCTGAGTGCACCCAGCTACATTTAAATCTGGAGAAAGAAAAGAACTTAACCAAAGACCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS-3UTR CAA 90 bp AATGTATCACGTTATGGCATCGATAAACATTTCTGTTCAAATGTGTGGATCTACTTGTTCAATGTGCATTaGTCTTTCATCCACCAGCAT +
Preference number: 5 (lower is better)
Translates to: NVSRYGIDKHFCSNVWIYLFNVH*SFIHQH
Trigger: ATGCTGGTGGATGAAAGACAAATGCACATTGAACAA...GTAGATCCACACATTTGAACAGAAATGTTTATCGATGCCATAACGTGATACATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CAA 90 bp ATAATTTTGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGAAGTCCACTTCTAACTaGAGCAATTTCTGTCTGTCT +
Preference number: 5 (lower is better)
Translates to: IILPSEVQTLANRILNCEKSTSN*SNFCLS
Trigger: AGACAGACAGAAATTGCTCAAGTTAGAAGTGGACTT...CTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCAAAATTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CAA 90 bp ATAATTTTGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGATGAGTGCAAAGGATTaGAGTTTAACAAGCTCATCT +
Preference number: 5 (lower is better)
Translates to: IILPSEVQTLANRILNCEMSAKD*SLTSSS
Trigger: AGATGAGCTTGTTAAACTCAAATCCTTTGCACTCAT...CTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCAAAATTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS-3UTR CAA 90 bp ATAATTTTGCCATCAGAGGTACAAACATTGGCAAATAGGATACTTAACTGTGAGTCTATTGCTTTATTCTaGGCAATTTGGTGCTTGATC +
Preference number: 5 (lower is better)
Translates to: IILPSEVQTLANRILNCESIALF*AIWCLI
Trigger: GATCAAGCACCAAATTGCCAAGAATAAAGCAATAGA...CTCACAGTTAAGTATCCTATTTGCCAATGTTTGTACCTCTGATGGCAAAATTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS CCA 72 bp AATGGCATCTCGGTGCAGGACCCGCAGCACTTTCTCTaGCTCCGCAGACCCGTAATGAGCCTCCAGAACCTC +
Preference number: 6 (lower is better)
Translates to: NGISVQDPQHFL*LRRPVMSLQNL
Trigger: GAGGTTCTGGAGGCTCATTACGGGTCTGCGGAGCCAGAGAAAGTGCTGCGGGTCCTGCACCGAGATGCCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
CDS CAA 72 bp CTGGTGTCACTCGAATATGCAGGGGCTGGCCCTGCTTaGGTGAAAGGACTACCTCTCCTGGGTGCCCTGGAC +
Preference number: 6 (lower is better)
Translates to: LVSLEYAGAGPA*VKGLPLLGALD
Trigger: GTCCAGGGCACCCAGGAGAGGTAGTCCTTTCACCAAAGCAGGGCCAGCCCCTGCATATTCGAGTGACACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS TCA 72 bp TGTCACTCGAATATGCAGGGGCTGGCCCTGCTTTGGTaGAAGGACTACCTCTCCTGGGTGCCCTGGACTGGA +
Preference number: 6 (lower is better)
Translates to: CHSNMQGLALLW*KDYLSWVPWTG
Trigger: TCCAGTCCAGGGCACCCAGGAGAGGTAGTCCTTTCACCAAAGCAGGGCCAGCCCCTGCATATTCGAGTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS GCA 72 bp TGGCCCTGCTTTGGTGAAAGGACTACCTCTCCTGGGTaGCCTGGACTGGAATTTGTTCGGGGCCCTTTCTCC +
Preference number: 6 (lower is better)
Translates to: WPCFGERTTSPG*PGLEFVRGPFS
Trigger: GGAGAAAGGGCCCCGAACAAATTCCAGTCCAGGGCACCCAGGAGAGGTAGTCCTTTCACCAAAGCAGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS GCA 72 bp TGGTCTGGTGTCACTCGAATATGCAGGGGCTGGCCCTaGTTTGGTGAAAGGACTACCTCTCCTGGGTGCCCT +
Preference number: 6 (lower is better)
Translates to: WSGVTRICRGWP*FGERTTSPGCP
Trigger: AGGGCACCCAGGAGAGGTAGTCCTTTCACCAAAGCAGGGCCAGCCCCTGCATATTCGAGTGACACCAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS CAA 90 bp TCTCGTGGTCTGGTGTCACTCGAATATGCAGGGGCTGGCCCTGCTTaGGTGAAAGGACTACCTCTCCTGGGTGCCCTGGACTGGAATTTG +
Preference number: 6 (lower is better)
Translates to: SRGLVSLEYAGAGPA*VKGLPLLGALDWNL
Trigger: CAAATTCCAGTCCAGGGCACCCAGGAGAGGTAGTCCTTTCACCAAAGCAGGGCCAGCCCCTGCATATTCGAGTGACACCAGACCACGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS GCA 72 bp GCAGTGCTGTTCTCGTGGTCTGGTGTCACTCGAATATaGAGGGGCTGGCCCTGCTTTGGTGAAAGGACTACC +
Preference number: 6 (lower is better)
Translates to: AVLFSWSGVTRI*RGWPCFGERTT
Trigger: GGTAGTCCTTTCACCAAAGCAGGGCCAGCCCCTGCATATTCGAGTGACACCAGACCACGAGAACAGCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS CCA 72 bp TTCTCGTGGTCTGGTGTCACTCGAATATGCAGGGGCTaGCCCTGCTTTGGTGAAAGGACTACCTCTCCTGGG +
Preference number: 6 (lower is better)
Translates to: FSWSGVTRICRG*PCFGERTTSPG
Trigger: CCCAGGAGAGGTAGTCCTTTCACCAAAGCAGGGCCAGCCCCTGCATATTCGAGTGACACCAGACCACGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS CCA 72 bp CCTTTTGACATAGGAATGCGGGTGGGTGTAGGCCGCTaGGATGACCCGTCTTGTCCTGACACTGACTGGGTT +
Preference number: 6 (lower is better)
Translates to: PFDIGMRVGVGR*DDPSCPDTDWV
Trigger: AACCCAGTCAGTGTCAGGACAAGACGGGTCATCCCAGCGGCCTACACCCACCCGCATTCCTATGTCAAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000498523.1
CDS CCA 72 bp TCTTTTGACATAGGAATGCGGGTGGGTGTAGGCCGCTaGGATGACCCGTCTTGTCCTGACACTGACTGGGTT +
Preference number: 6 (lower is better)
Translates to: SFDIGMRVGVGR*DDPSCPDTDWV
Trigger: AACCCAGTCAGTGTCAGGACAAGACGGGTCATCCCAGCGGCCTACACCCACCCGCATTCCTATGTCAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS CCA 72 bp TGTTATCTCCAAAGTCGCAGTGCTGTTCTCGTGGTCTaGTGTCACTCGAATATGCAGGGGCTGGCCCTGCTT +
Preference number: 6 (lower is better)
Translates to: CYLQSRSAVLVV*CHSNMQGLALL
Trigger: AAGCAGGGCCAGCCCCTGCATATTCGAGTGACACCAGACCACGAGAACAGCACTGCGACTTTGGAGATAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS CAA 72 bp AAGGGGGTACTGAAGTTTGTTCAACAGCAGCAGGCCTaGCTCAGCCCCCTACTCCACAGGGAATTAACCGTC +
Preference number: 6 (lower is better)
Translates to: KGVLKFVQQQQA*LSPLLHRELTV
Trigger: GACGGTTAATTCCCTGTGGAGTAGGGGGCTGAGCAAGGCCTGCTGCTGTTGAACAAACTTCAGTACCCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000498523.1
CDS TCA 72 bp ATACAGCTGGCGTTTCTTCCTCTGCTGCTTCACCGCTaGCTGCATCAGTTTGGACTCCAGTTGACGTCACAG +
Preference number: 6 (lower is better)
Translates to: IQLAFLPLLLHR*LHQFGLQLTSQ
Trigger: CTGTGACGTCAACTGGAGTCCAAACTGATGCAGTCAGCGGTGAAGCAGCAGAGGAAGAAACGCCAGCTGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS TCA 72 bp TCAGCTGGTGCTGCTGATGTAGACACCGTCATTATCTaGATAGGGGATGTGGGCCTGTCTGCAAATGCGCCT +
Preference number: 6 (lower is better)
Translates to: SAGAADVDTVII*IGDVGLSANAP
Trigger: AGGCGCATTTGCAGACAGGCCCACATCCCCTATTCAGATAATGACGGTGTCTACATCAGCAGCACCAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS CCA 72 bp AGACATCTTCTCCTATGGATTTCTCCTGGGCAAGAATaGCATCTCGGTGCAGGACCCGCAGCACTTTCTCTG +
Preference number: 6 (lower is better)
Translates to: RHLLLWISPGQE*HLGAGPAALSL
Trigger: CAGAGAAAGTGCTGCGGGTCCTGCACCGAGATGCCATTCTTGCCCAGGAGAAATCCATAGGAGAAGATGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
CDS CCA 72 bp GTGACTTTGAGGATTGTCCGTCCCATGGGCATTTCCTaGGATTCGGGAGAAACTGCAATCTCAGCTGGTGCT +
Preference number: 6 (lower is better)
Translates to: VTLRIVRPMGIS*DSGETAISAGA
Trigger: AGCACCAGCTGAGATTGCAGTTTCTCCCGAATCCCAGGAAATGCCCATGGGACGGACAATCCTCAAAGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS CCA 72 bp GCCGGTGGAAACCTCCTTTTCGGCTGTCACGTTTACTaGTCGGACAGTAATAACTGGACTGACTCCTTCACC +
Preference number: 6 (lower is better)
Translates to: AGGNLLFGCHVY*SDSNNWTDSFT
Trigger: GGTGAAGGAGTCAGTCCAGTTATTACTGTCCGACCAGTAAACGTGACAGCCGAAAAGGAGGTTTCCACCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS GCA 72 bp CACCGTCATTATCTGAATAGGGGATGTGGGCCTGTCTaGAAATGCGCCTCTTCCACTTTCTGGAGTCTTCTC +
Preference number: 6 (lower is better)
Translates to: HRHYLNRGCGPV*KCASSTFWSLL
Trigger: GAGAAGACTCCAGAAAGTGGAAGAGGCGCATTTGCAGACAGGCCCACATCCCCTATTCAGATAATGACGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS CCA 72 bp TCTTCCTCTGCTGCTTCACCGCTGACTGCATCAGTTTaGACTCCAGTTGACGTCACAGGAACATCCACCATT +
Preference number: 6 (lower is better)
Translates to: SSSAASPLTASV*TPVDVTGTSTI
Trigger: AATGGTGGATGTTCCTGTGACGTCAACTGGAGTCCAAACTGATGCAGTCAGCGGTGAAGCAGCAGAGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS TCA 72 bp TTTTTAACCTCTCCCGCTCCTGCTCCAGCAGGTTGGTaGAGTCGTCGCTCTTGTTCATGTAGTCAGTGTGTT +
Preference number: 6 (lower is better)
Translates to: FLTSPAPAPAGW*SRRSCSCSQCV
Trigger: AACACACTGACTACATGAACAAGAGCGACGACTTCACCAACCTGCTGGAGCAGGAGCGGGAGAGGTTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
CDS GCA 72 bp TGTGTTTATGCTTCTCGTTCTCTAACTCGTATACGGTaGGCCTATGACACTTCTCGGCCAGCAACAGCTGCT +
Preference number: 6 (lower is better)
Translates to: CVYASRSLTRIR*AYDTSRPATAA
Trigger: AGCAGCTGTTGCTGGCCGAGAAGTGTCATAGGCGCACCGTATACGAGTTAGAGAACGAGAAGCATAAACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
CDS GCA 72 bp TTTCCGTATGAATACAGCTGGCGTTTCTTCCTCTGCTaGTTCACCGCTGACTGCATCAGTTTGGACTCCAGT +
Preference number: 6 (lower is better)
Translates to: FPYEYSWRFFLC*FTADCISLDSS
Trigger: ACTGGAGTCCAAACTGATGCAGTCAGCGGTGAAGCAGCAGAGGAAGAAACGCCAGCTGTATTCATACGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS GCA 72 bp CTTCAGATGTCGGGCTTGTTATCTCCAAAGTCGCAGTaGTGTTCTCGTGGTCTGGTGTCACTCGAATATGCA +
Preference number: 6 (lower is better)
Translates to: LQMSGLLSPKSQ*CSRGLVSLEYA
Trigger: TGCATATTCGAGTGACACCAGACCACGAGAACAGCACTGCGACTTTGGAGATAACAAGCCCGACATCTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS GCA 72 bp CATTATCTGAATAGGGGATGTGGGCCTGTCTGCAAATaGGCCTCTTCCACTTTCTGGAGTCTTCTCTCTGGA +
Preference number: 6 (lower is better)
Translates to: HYLNRGCGPVCK*ASSTFWSLLSG
Trigger: TCCAGAGAGAAGACTCCAGAAAGTGGAAGAGGCGCATTTGCAGACAGGCCCACATCCCCTATTCAGATAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS CAA 72 bp ACTGGAGTTGGAACAGTCTGTTTTTCTGGGGTGACTTaGAGGATTGTCCGTCCCATGGGCATTTCCTGGGAT +
Preference number: 6 (lower is better)
Translates to: TGVGTVCFSGVT*RIVRPMGISWD
Trigger: ATCCCAGGAAATGCCCATGGGACGGACAATCCTCAAAGTCACCCCAGAAAAACAGACTGTTCCAACTCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS CAA 90 bp TATTTCCGTACTGGAGTTGGAACAGTCTGTTTTTCTGGGGTGACTTaGAGGATTGTCCGTCCCATGGGCATTTCCTGGGATTCGGGAGAA +
Preference number: 6 (lower is better)
Translates to: YFRTGVGTVCFSGVT*RIVRPMGISWDSGE
Trigger: TTCTCCCGAATCCCAGGAAATGCCCATGGGACGGACAATCCTCAAAGTCACCCCAGAAAAACAGACTGTTCCAACTCCAGTACGGAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS TCA 72 bp TGCTTCACCGCTGACTGCATCAGTTTGGACTCCAGTTaGCGTCACAGGAACATCCACCATTCTTCTTCCATT +
Preference number: 6 (lower is better)
Translates to: CFTADCISLDSS*RHRNIHHSSSI
Trigger: AATGGAAGAAGAATGGTGGATGTTCCTGTGACGTCAACTGGAGTCCAAACTGATGCAGTCAGCGGTGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS TCA 72 bp GGATTCGGGAGAAACTGCAATCTCAGCTGGTGCTGCTaGTGTAGACACCGTCATTATCTGAATAGGGGATGT +
Preference number: 6 (lower is better)
Translates to: GFGRNCNLSWCC*CRHRHYLNRGC
Trigger: ACATCCCCTATTCAGATAATGACGGTGTCTACATCAGCAGCACCAGCTGAGATTGCAGTTTCTCCCGAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS CCA 72 bp ATTTTCTTCCTGGAAGGATTTCCGTATGAATACAGCTaGCGTTTCTTCCTCTGCTGCTTCACCGCTGACTGC +
Preference number: 6 (lower is better)
Translates to: IFFLEGFPYEYS*RFFLCCFTADC
Trigger: GCAGTCAGCGGTGAAGCAGCAGAGGAAGAAACGCCAGCTGTATTCATACGGAAATCCTTCCAGGAAGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS CCA 72 bp GTATTTCCGTACTGGAGTTGGAACAGTCTGTTTTTCTaGGGTGACTTTGAGGATTGTCCGTCCCATGGGCAT +
Preference number: 6 (lower is better)
Translates to: VFPYWSWNSLFF*GDFEDCPSHGH
Trigger: ATGCCCATGGGACGGACAATCCTCAAAGTCACCCCAGAAAAACAGACTGTTCCAACTCCAGTACGGAAATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS CCA 72 bp GCTCTGAAATCGGTTTCTCATAGACATCTTCTCCTATaGATTTCTCCTGGGCAAGAATGGCATCTCGGTGCA +
Preference number: 6 (lower is better)
Translates to: ALKSVSHRHLLL*ISPGQEWHLGA
Trigger: TGCACCGAGATGCCATTCTTGCCCAGGAGAAATCCATAGGAGAAGATGTCTATGAGAAACCGATTTCAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
CDS CCA 72 bp AGTGATGGAGGGGCCGTTTTCCCTCTTTCTCATCCATaGAATCCAAGACTTTCTCATAGTGAGCTCATTTGC +
Preference number: 6 (lower is better)
Translates to: SDGGAVFPLSHP*NPRLSHSELIC
Trigger: GCAAATGAGCTCACTATGAGAAAGTCTTGGATTCCATGGATGAGAAAGAGGGAAAACGGCCCCTCCATCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS GCA 72 bp CATTTCAAGCACACGCTTTCGAAGATTTTCCACTTCTaGCATGAGGCTAGAGTTTCCACATTCTCCTTTGGC +
Preference number: 6 (lower is better)
Translates to: HFKHTLSKIFHF*HEARVSTFSFG
Trigger: GCCAAAGGAGAATGTGGAAACTCTAGCCTCATGGCAGAAGTGGAAAATCTTCGAAAGCGTGTGCTTGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS GCA 72 bp TCAAGTCTGAGCTCCTTACTATGGTGTTCTTCCTCTTaGAGCTTCTTCCTCAATTCCCTACACTGGGATTCA +
Preference number: 6 (lower is better)
Translates to: SSLSSLLWCSSS*SFFLNSLHWDS
Trigger: TGAATCCCAGTGTAGGGAATTGAGGAAGAAGCTGCAAGAGGAAGAACACCATAGTAAGGAGCTCAGACTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS CCA 72 bp TCTTCCAACCGAAATCTGTGTCTCAGTTCAGCTTCCTaGCTCACAACCTCACCCTTCTCTATTGCTTTATTC +
Preference number: 6 (lower is better)
Translates to: SSNRNLCLSSAS*LTTSPFSIALF
Trigger: GAATAAAGCAATAGAGAAGGGTGAGGTTGTGAGCCAGGAAGCTGAACTGAGACACAGATTTCGGTTGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS CAA 90 bp CAGCTTCTGAGTAAGATCCTGTACTTTCTGGCTTTGCAGGCCAAGTaGTTCAATGTGCATTTGTCTTTCATCCACCAGCATGAGTGCAAA +
Preference number: 6 (lower is better)
Translates to: QLLSKILYFLALQAK*FNVHLSFIHQHECK
Trigger: TTTGCACTCATGCTGGTGGATGAAAGACAAATGCACATTGAACAACTTGGCCTGCAAAGCCAGAAAGTACAGGATCTTACTCAGAAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS TCA 72 bp CTGGCTGCAGATTTCTTCAGCTCTATTTTCATAGACTaGGTCTCAGCTCGAGGCTCGAATTTGGTCAGATTT +
Preference number: 6 (lower is better)
Translates to: LAADFFSSIFID*VSARGSNLVRF
Trigger: AAATCTGACCAAATTCGAGCCTCGAGCTGAGACTCAGTCTATGAAAATAGAGCTGAAGAAATCTGCAGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000498523.1
CDS CCA 72 bp CAGCTTCTTCTCCCTGAAATCCCGATCAGCAGAAATTaGAAGTTGTTGTATATCTCCCACCCAGACTTTTGT +
Preference number: 6 (lower is better)
Translates to: QLLLPEIPISRN*KLLYISHPDFC
Trigger: ACAAAAGTCTGGGTGGGAGATATACAACAACTTCCAATTTCTGCTGATCGGGATTTCAGGGAGAAGAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237172.12
CDS CAA 72 bp AGGGATTCAGAGGTCGTACACACACCCAGTATGTGCTaGGTTTACCATTTCATCTGGAGTTCATTCGTAACT +
Preference number: 6 (lower is better)
Translates to: RDSEVVHTPSMC*VYHFIWSSFVT
Trigger: AGTTACGAATGAACTCCAGATGAAATGGTAAACCAAGCACATACTGGGTGTGTGTACGACCTCTGAATCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS TCA 72 bp TTCTTGGCAATTTGGTGCTTGATCTCCTCTAGTTGTTaGGAGAGGAAGTTAGCCTTATCCTGCTCAGTTCTA +
Preference number: 6 (lower is better)
Translates to: FLAIWCLISSSC*ERKLALSCSVL
Trigger: TAGAACTGAGCAGGATAAGGCTAACTTCCTCTCTCAACAACTAGAGGAGATCAAGCACCAAATTGCCAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS TCA 72 bp TGTAGCGCTTGGAAAGCTCCAACTCTTTGGTCAGATTaGGAACCTCCTGCCCCATGTTTTTGTTCTTATTTT +
Preference number: 6 (lower is better)
Translates to: CSAWKAPTLWSD*EPPAPCFCSYF
Trigger: AAAATAAGAACAAAAACATGGGGCAGGAGGTTCTCAATCTGACCAAAGAGTTGGAGCTTTCCAAGCGCTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS GCA 72 bp AATAGGGATTCAGAGGTCGTACACACACCCAGTATGTaGTTGGTTTACCATTTCATCTGGAGTTCATTCGTA +
Preference number: 6 (lower is better)
Translates to: NRDSEVVHTPSM*LVYHFIWSSFV
Trigger: TACGAATGAACTCCAGATGAAATGGTAAACCAAGCACATACTGGGTGTGTGTACGACCTCTGAATCCCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS CAA 72 bp TATGTAGGTAGTTTATCCTTTGAAGAACCCAGTGGCTaGTCTCACAGCCCAAGACAGATTCGAGTTCTCAAA +
Preference number: 6 (lower is better)
Translates to: YVGSLSFEEPSG*SHSPRQIRVLK
Trigger: TTTGAGAACTCGAATCTGTCTTGGGCTGTGAGACAAGCCACTGGGTTCTTCAAAGGATAAACTACCTACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000393004.6
CDS CAA 72 bp TTTCTGGCTTTGCAGGCCAAGTTGTTCAATGTGCATTaGTCTTTCATCCACCAGCATGAGTGCAAAGGATTT +
Preference number: 6 (lower is better)
Translates to: FLALQAKLFNVH*SFIHQHECKGF
Trigger: AAATCCTTTGCACTCATGCTGGTGGATGAAAGACAAATGCACATTGAACAACTTGGCCTGCAAAGCCAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS CAA 72 bp AGTAAGATCCTGTACTTTCTGGCTTTGCAGGCCAAGTaGTTCAATGTGCATTTGTCTTTCATCCACCAGCAT +
Preference number: 6 (lower is better)
Translates to: SKILYFLALQAK*FNVHLSFIHQH
Trigger: ATGCTGGTGGATGAAAGACAAATGCACATTGAACAACTTGGCCTGCAAAGCCAGAAAGTACAGGATCTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS CAA 72 bp AACCAGCTTGAGTCTAAGTTGCCTATTGTGAGACTCTaGATTAGCCAGTTTAGCGTTCATCTCTTCATGCTC +
Preference number: 6 (lower is better)
Translates to: NQLESKLPIVRL*ISQFSVHLFML
Trigger: GAGCATGAAGAGATGAACGCTAAACTGGCTAATCAAGAGTCTCACAATAGGCAACTTAGACTCAAGCTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS CAA 90 bp TATGTCCTCTATGTAGGTAGTTTATCCTTTGAAGAACCCAGTGGCTaGTCTCACAGCCCAAGACAGATTCGAGTTCTCAAAAACTATCCA +
Preference number: 6 (lower is better)
Translates to: YVLYVGSLSFEEPSG*SHSPRQIRVLKNYP
Trigger: TGGATAGTTTTTGAGAACTCGAATCTGTCTTGGGCTGTGAGACAAGCCACTGGGTTCTTCAAAGGATAAACTACCTACATAGAGGACATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000393004.6
CDS CAA 90 bp ATCCTGTACTTTCTGGCTTTGCAGGCCAAGTTGTTCAATGTGCATTaGTCTTTCATCCACCAGCATGAGTGCAAAGGATTTGAGTTTAAC +
Preference number: 6 (lower is better)
Translates to: ILYFLALQAKLFNVH*SFIHQHECKGFEFN
Trigger: GTTAAACTCAAATCCTTTGCACTCATGCTGGTGGATGAAAGACAAATGCACATTGAACAACTTGGCCTGCAAAGCCAGAAAGTACAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS CCA 72 bp GTCTTCATCAAATCCCCTTCGACCACTTCCAATTGTTaGAGACGTTTCTTCAGTCTCTCAATTTCAAGTGTT +
Preference number: 6 (lower is better)
Translates to: VFIKSPSTTSNC*RRFFSLSISSV
Trigger: AACACTTGAAATTGAGAGACTGAAGAAACGTCTCCAACAATTGGAAGTGGTCGAAGGGGATTTGATGAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS CCA 72 bp GGTTATGATATTGGCATTGGAGTTGTATTTCCGTACTaGAGTTGGAACAGTCTGTTTTTCTGGGGTGACTTT +
Preference number: 6 (lower is better)
Translates to: GYDIGIGVVFPY*SWNSLFFWGDF
Trigger: AAAGTCACCCCAGAAAAACAGACTGTTCCAACTCCAGTACGGAAATACAACTCCAATGCCAATATCATAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS CAA 72 bp TGTCTTCATCAAATCCCCTTCGACCACTTCCAATTGTaGGAGACGTTTCTTCAGTCTCTCAATTTCAAGTGT +
Preference number: 6 (lower is better)
Translates to: CLHQIPFDHFQL*ETFLQSLNFKC
Trigger: ACACTTGAAATTGAGAGACTGAAGAAACGTCTCCAACAATTGGAAGTGGTCGAAGGGGATTTGATGAAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS CAA 72 bp TTCTGTCTTCATCAAATCCCCTTCGACCACTTCCAATaGTTGGAGACGTTTCTTCAGTCTCTCAATTTCAAG +
Preference number: 6 (lower is better)
Translates to: FCLHQIPFDHFQ*LETFLQSLNFK
Trigger: CTTGAAATTGAGAGACTGAAGAAACGTCTCCAACAATTGGAAGTGGTCGAAGGGGATTTGATGAAGACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS CAA 90 bp TGCAACTCCCCTTCCATTATACTGAGTAGTTGGATGAGGTCTTCTTaGGATAACTCCAGGGATTTCTTAGTTTTTCGTTCACATTCTCCA +
Preference number: 6 (lower is better)
Translates to: CNSPSIILSSWMRSS*DNSRDFLVFRSHSP
Trigger: TGGAGAATGTGAACGAAAAACTAAGAAATCCCTGGAGTTATCCAAAGAAGACCTCATCCAACTACTCAGTATAATGGAAGGGGAGTTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000393004.6
CDS TCA 72 bp GGTTTACCATTTCATCTGGAGTTCATTCGTAACTGGTaGATGATGATGCTTTCTTTTGACATAGGAATGCGG +
Preference number: 6 (lower is better)
Translates to: GLPFHLEFIRNW*MMMLSFDIGMR
Trigger: CCGCATTCCTATGTCAAAAGAAAGCATCATCATTCACCAGTTACGAATGAACTCCAGATGAAATGGTAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393004.6
CDS CAA 72 bp CTCCCTGAAATCCCGATCAGCAGAAATTGGAAGTTGTaGTATATCTCCCACCCAGACTTTTGTTTAAAAGTT +
Preference number: 6 (lower is better)
Translates to: LPEIPISRNWKL*YISHPDFCLKV
Trigger: AACTTTTAAACAAAAGTCTGGGTGGGAGATATACAACAACTTCCAATTTCTGCTGATCGGGATTTCAGGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237172.12
CDS CAA 72 bp AACCTCGAAGCCTTGTGTTCAAAGTCCACTTCTAACTaGAGCAATTTCTGTCTGTCTTCTTTGGATTTGGAA +
Preference number: 6 (lower is better)
Translates to: NLEALCSKSTSN*SNFCLSSLDLE
Trigger: TTCCAAATCCAAAGAAGACAGACAGAAATTGCTCAAGTTAGAAGTGGACTTTGAACACAAGGCTTCGAGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS CAA 90 bp TCTTTAACTCGACTCTTGACCACCTCCAATTCATTTAGCAGGTCTTaGGTTAAGTTCTTTTCTTTCTCCAGATTTAAATGTAGCTGGGTG +
Preference number: 6 (lower is better)
Translates to: SLTRLLTTSNSFSRS*VKFFSFSRFKCSWV
Trigger: CACCCAGCTACATTTAAATCTGGAGAAAGAAAAGAACTTAACCAAAGACCTGCTAAATGAATTGGAGGTGGTCAAGAGTCGAGTTAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS TCA 72 bp ACGTTTGGTGATGGAATAATGGTTATTCTTGGTTTCTaGTTCCCTAAGGTAGGAATGACAGTGGTACTAGAA +
Preference number: 6 (lower is better)
Translates to: TFGDGIMVILGF*FPKVGMTVVLE
Trigger: TTCTAGTACCACTGTCATTCCTACCTTAGGGAATCAGAAACCAAGAATAACCATTATTCCATCACCAAACGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS CAA 72 bp CCTTCCATTATACTGAGTAGTTGGATGAGGTCTTCTTaGGATAACTCCAGGGATTTCTTAGTTTTTCGTTCA +
Preference number: 6 (lower is better)
Translates to: PSIILSSWMRSS*DNSRDFLVFRS
Trigger: TGAACGAAAAACTAAGAAATCCCTGGAGTTATCCAAAGAAGACCTCATCCAACTACTCAGTATAATGGAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237172.12
ENST00000393004.6
CDS CAA 72 bp TCTAACTTGAGCAATTTCTGTCTGTCTTCTTTGGATTaGGAAGTAATGGCTTTGAGCTTCTCTTCTTCTTCC +
Preference number: 6 (lower is better)
Translates to: SNLSNFCLSSLD*EVMALSFSSSS
Trigger: GGAAGAAGAAGAGAAGCTCAAAGCCATTACTTCCAAATCCAAAGAAGACAGACAGAAATTGCTCAAGTTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS CAA 72 bp CTACTTTCAGAACATTCCAATTCTTTAACTCGACTCTaGACCACCTCCAATTCATTTAGCAGGTCTTTGGTT +
Preference number: 6 (lower is better)
Translates to: LLSEHSNSLTRL*TTSNSFSRSLV
Trigger: AACCAAAGACCTGCTAAATGAATTGGAGGTGGTCAAGAGTCGAGTTAAAGAATTGGAATGTTCTGAAAGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS CAA 72 bp TTATTGTCCTCTGTGGTTATGATATTGGCATTGGAGTaGTATTTCCGTACTGGAGTTGGAACAGTCTGTTTT +
Preference number: 6 (lower is better)
Translates to: LLSSVVMILALE*YFRTGVGTVCF
Trigger: AAAACAGACTGTTCCAACTCCAGTACGGAAATACAACTCCAATGCCAATATCATAACCACAGAGGACAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS CAA 90 bp TCAATGTGCATTTGTCTTTCATCCACCAGCATGAGTGCAAAGGATTaGAGTTTAACAAGCTCATCTCTTAGTTTATTGAGTCGTTTAGCA +
Preference number: 6 (lower is better)
Translates to: SMCICLSSTSMSAKD*SLTSSSLSLLSRLA
Trigger: TGCTAAACGACTCAATAAACTAAGAGATGAGCTTGTTAAACTCAAATCCTTTGCACTCATGCTGGTGGATGAAAGACAAATGCACATTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS TCA 72 bp TTCTTCAATCCCACCTGCCGAAGATTACTCATAATATaGTTTTCTTCCTGGAAGGATTTCCGTATGAATACA +
Preference number: 6 (lower is better)
Translates to: FFNPTCRRLLII*FSSWKDFRMNT
Trigger: TGTATTCATACGGAAATCCTTCCAGGAAGAAAATCATATTATGAGTAATCTTCGGCAGGTGGGATTGAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS CAA 72 bp CTTTCATCAACCAGCATCACGGTAAATGACTTCAACTaGGTAAGATCATCTTTTAGGCTTAATTCAGCCTTT +
Preference number: 6 (lower is better)
Translates to: LSSTSITVNDFN*VRSSFRLNSAF
Trigger: AAAGGCTGAATTAAGCCTAAAAGATGATCTTACCAAGTTGAAGTCATTTACCGTGATGCTGGTTGATGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS CAA 90 bp TTTTCCAATCTACTTTCAGAACATTCCAATTCTTTAACTCGACTCTaGACCACCTCCAATTCATTTAGCAGGTCTTTGGTTAAGTTCTTT +
Preference number: 6 (lower is better)
Translates to: FSNLLSEHSNSLTRL*TTSNSFSRSLVKFF
Trigger: AAAGAACTTAACCAAAGACCTGCTAAATGAATTGGAGGTGGTCAAGAGTCGAGTTAAAGAATTGGAATGTTCTGAAAGTAGATTGGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS CAA 72 bp AAGGATTTGAGTTTAACAAGCTCATCTCTTAGTTTATaGAGTCGTTTAGCATTTTCCTTTTCTTTGCGGGCT +
Preference number: 6 (lower is better)
Translates to: KDLSLTSSSLSL*SRLAFSFSLRA
Trigger: AGCCCGCAAAGAAAAGGAAAATGCTAAACGACTCAATAAACTAAGAGATGAGCTTGTTAAACTCAAATCCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1
CDS CAA 72 bp ATTTGTCTTTCATCCACCAGCATGAGTGCAAAGGATTaGAGTTTAACAAGCTCATCTCTTAGTTTATTGAGT +
Preference number: 6 (lower is better)
Translates to: ICLSSTSMSAKD*SLTSSSLSLLS
Trigger: ACTCAATAAACTAAGAGATGAGCTTGTTAAACTCAAATCCTTTGCACTCATGCTGGTGGATGAAAGACAAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237172.12
ENST00000370020.1
ENST00000393004.6
ENST00000498523.1