RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FIBCD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000130720

Ensembl transcript IDs: ENST00000372337.6, ENST00000372338.9, ENST00000444139.5, ENST00000448616.5, ENST00000451466.1, ENST00000463475.1, ENST00000486250.5

Found 584 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGTCCCTTGACCACTCGCCGGGCCGGGCCTGGCCTGGGTCCAGGTaGCCACGGTCAATGGCAAGGGTTGGCCTCCTCATGGAGACAGCC +
Preference number: 1 (lower is better)
Translates to: LSLDHSPGRAWPGSR*PRSMARVGLLMETA
Trigger: GGCTGTCTCCATGAGGAGGCCAACCCTTGCCATTGACCGTGGCCACCTGGACCCAGGCCAGGCCCGGCCCGGCGAGTGGTCAAGGGACAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR TCA 90 bp ACCTCAGGGCCTGGTAGGATGGGGCCACCCAGCCCACAGCCAGGCTaGGGCCCTTGGGGGAGAGGTGGGTTCTCTGGGCACCAGGGAAAC +
Preference number: 1 (lower is better)
Translates to: TSGPGRMGPPSPQPG*GPWGRGGFSGHQGN
Trigger: GTTTCCCTGGTGCCCAGAGAACCCACCTCTCCCCCAAGGGCCTCAGCCTGGCTGTGGGCTGGGTGGCCCCATCCTACCAGGCCCTGAGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR CCA 90 bp AGGCGATGTGTGACTTCACCGGCCCAGGGAGCTTCGTGTCAGGGATaGCCCGGCCCCTCCCTACTGGAGAGTGGGTCCGCCAGGCACAGG +
Preference number: 1 (lower is better)
Translates to: RRCVTSPAQGASCQG*PGPSLLESGSARHR
Trigger: CCTGTGCCTGGCGGACCCACTCTCCAGTAGGGAGGGGCCGGGCCATCCCTGACACGAAGCTCCCTGGGCCGGTGAAGTCACACATCGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
3UTR CCA 90 bp CTGGGTCCAGGTGGCCACGGTCAATGGCAAGGGTTGGCCTCCTCATaGAGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCT +
Preference number: 1 (lower is better)
Translates to: LGPGGHGQWQGLASS*RQPPQGRGHHPQGP
Trigger: AGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCTCCATGAGGAGGCCAACCCTTGCCATTGACCGTGGCCACCTGGACCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR TCA 90 bp AGGAGGACGGCCGGGAGCTGGGTGGGGGATGGGTTGGGCCTCATTTaGGACAGAGAGCAGGTGGGCACAGCAGGTAAGAGGACTGCAGAC +
Preference number: 1 (lower is better)
Translates to: RRTAGSWVGDGLGLI*DREQVGTAGKRTAD
Trigger: GTCTGCAGTCCTCTTACCTGCTGTGCCCACCTGCTCTCTGTCTCAAATGAGGCCCAACCCATCCCCCACCCAGCTCCCGGCCGTCCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR CCA 90 bp TCCGCCAGGCACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTaGGGTCGGGGATGGGGCGACAGGGACCAGCAGGGCCAAGGACAA +
Preference number: 1 (lower is better)
Translates to: SARHRWVENIHERVR*GRGWGDRDQQGQGQ
Trigger: TTGTCCTTGGCCCTGCTGGTCCCTGTCGCCCCATCCCCGACCCCACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
3UTR TCA 90 bp GGAGGGCTGGAGGATACTGGCCTCAGACCTGACCTCAGAGAGACCTaGCGTTCCCCACGATCTGCTAGGAGGACTCCAGGGGTGCTGTCT +
Preference number: 1 (lower is better)
Translates to: GGLEDTGLRPDLRET*RSPRSARRTPGVLS
Trigger: AGACAGCACCCCTGGAGTCCTCCTAGCAGATCGTGGGGAACGTCAGGTCTCTCTGAGGTCAGGTCTGAGGCCAGTATCCTCCAGCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR TCA 90 bp GCCTGCGGGTCTCACCTCTGCATGTGTGCACACAAGGAGTGGGGATaGCAGCGTGCTGGGTGTTGGGAGGATTCAACAAGAAAGTGTCCA +
Preference number: 1 (lower is better)
Translates to: ACGSHLCMCAHKEWG*QRAGCWEDSTRKCP
Trigger: TGGACACTTTCTTGTTGAATCCTCCCAACACCCAGCACGCTGTCATCCCCACTCCTTGTGTGCACACATGCAGAGGTGAGACCCGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR GCA 90 bp GTCTCACCTCTGCATGTGTGCACACAAGGAGTGGGGATGACAGCGTaGTGGGTGTTGGGAGGATTCAACAAGAAAGTGTCCAGGTGGTGC +
Preference number: 1 (lower is better)
Translates to: VSPLHVCTQGVGMTA*WVLGGFNKKVSRWC
Trigger: GCACCACCTGGACACTTTCTTGTTGAATCCTCCCAACACCCAGCACGCTGTCATCCCCACTCCTTGTGTGCACACATGCAGAGGTGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR CCA 90 bp TCACCTCTGCATGTGTGCACACAAGGAGTGGGGATGACAGCGTGCTaGGTGTTGGGAGGATTCAACAAGAAAGTGTCCAGGTGGTGCCTG +
Preference number: 1 (lower is better)
Translates to: SPLHVCTQGVGMTAC*VLGGFNKKVSRWCL
Trigger: CAGGCACCACCTGGACACTTTCTTGTTGAATCCTCCCAACACCCAGCACGCTGTCATCCCCACTCCTTGTGTGCACACATGCAGAGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR GCA 90 bp GAGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCCTCCAGGGGTGCTGTCTaGCCCCTGCTCTCTGTCCCC +
Preference number: 2 (lower is better)
Translates to: ETATSGKGSSPPRPSWEASRGAV*PLLSVP
Trigger: GGGGACAGAGAGCAGGGGGCAGACAGCACCCCTGGA...GGCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CCA 90 bp ACTCCACCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGTGGGGTCGGGGATaGGGCGACAGGGACCAGCAG +
Preference number: 2 (lower is better)
Translates to: TPPSWPGDGKQHRSHSGGRWGRG*GDRDQQ
Trigger: CTGCTGGTCCCTGTCGCCCCATCCCCGACCCCACCT...GCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGGTGGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
3UTR-3UTR CCA 90 bp CACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCCCCGGCCCCTCCCTACTaGAGAGTGGGTCCGCCAGGC +
Preference number: 2 (lower is better)
Translates to: HRSHSGGRQELGSSSLPAPAPPY*RVGPPG
Trigger: GCCTGGCGGACCCACTCTCCAGTAGGGAGGGGCCGG...GGCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
3UTR-3UTR CCA 90 bp GGAGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCGGGGCACAGGGTGGGTaGCCTCCAGGGAACTGGTCT +
Preference number: 2 (lower is better)
Translates to: GDSHLREGVITPKALLGGGAQGG*PPGNWS
Trigger: AGACCAGTTCCCTGGAGGCCACCCACCCTGTGCCCC...GCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR TCA 90 bp GAGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCCAGCAGCTCCCCATCCTaGCCTCAGGGCCTGGTAGGA +
Preference number: 2 (lower is better)
Translates to: ETATSGKGSSPPRPSWEASSSPS*PQGLVG
Trigger: TCCTACCAGGCCCTGAGGTCAGGATGGGGAGCTGCT...GGCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CCA 90 bp CCTGCTCTCTGTCCCCATAATGCCGGGTATTTGGCCGGGCAGGGCAGAGGGTGCAGGTGGGGTCGGGGATaGGGCGACAGGGACCAGCAG +
Preference number: 2 (lower is better)
Translates to: PALCPHNAGYLAGQGRGCRWGRG*GDRDQQ
Trigger: CTGCTGGTCCCTGTCGCCCCATCCCCGACCCCACCT...GCACCCTCTGCCCTGCCCGGCCAAATACCCGGCATTATGGGGACAGAGAGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
3UTR-3UTR CCA 90 bp CCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTCACGAAAGAGTGAGGTaGGGTCGGGGATGGGGCGAC +
Preference number: 2 (lower is better)
Translates to: PGQGTANSTGVTVGAGRSHERVR*GRGWGD
Trigger: GTCGCCCCATCCCCGACCCCACCTCACTCTTTCGTG...ACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
3UTR-3UTR CCA 90 bp AGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCCTCCCTTGGGGGAGAGGTaGGTTCTCTGGGCACCAGGG +
Preference number: 2 (lower is better)
Translates to: RQPPQGRGHHPQGPPGRPPLGER*VLWAPG
Trigger: CCCTGGTGCCCAGAGAACCCACCTCTCCCCCAAGGG...AGGCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CCA 90 bp CTGCCCCAGGTAGGAGGACGGCCGGGAGCTGGGTGGGGGATGGGTTGGGCCTCAAACTGGTCTCAGCCTTaGAGCGTGGGTCCCCAAAGG +
Preference number: 2 (lower is better)
Translates to: LPQVGGRPGAGWGMGWASNWSQP*SVGPQR
Trigger: CCTTTGGGGACCCACGCTCCAAGGCTGAGACCAGTT...TGAGGCCCAACCCATCCCCCACCCAGCTCCCGGCCGTCCTCCTACCTGGGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR TCA 90 bp ACCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCACGAGAAGGCGATGTGTaGCTTCACCGGCCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: TILARGRQTAPESQWGQAREGDV*LHRPRE
Trigger: CTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCG...TGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CCA 90 bp CAGAGGCAAGAGATCAGTGAGCTGCCAAATGGAGGGGGTGGGGACGGCGAGAAGCCGGCCCCTCCCTACTaGAGAGTGGGTCCGCCAGGC +
Preference number: 2 (lower is better)
Translates to: QRQEISELPNGGGGDGEKPAPPY*RVGPPG
Trigger: GCCTGGCGGACCCACTCTCCAGTAGGGAGGGGCCGG...CTTCTCGCCGTCCCCACCCCCTCCATTTGGCAGCTCACTGATCTCTTGCCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
3UTR-3UTR CCA 90 bp GAGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCCGGGGCAGGCAGGAGTTaGGGTCGTCAAGTTTGCCAG +
Preference number: 2 (lower is better)
Translates to: ETATSGKGSSPPRPSWEAGAGRS*GRQVCQ
Trigger: CTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCC...GGCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CCA 90 bp AGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCCTACCAGGGAAACGGGGTaGGGGTTGGCATTGGGAGGG +
Preference number: 2 (lower is better)
Translates to: RQPPQGRGHHPQGPPGRPTRETG*GLALGG
Trigger: CCCTCCCAATGCCAACCCCCACCCCGTTTCCCTGGT...AGGCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CCA 90 bp GAGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCCTGGCCTCCAGGGAACTaGTCTCAGCCTTGGAGCGTG +
Preference number: 2 (lower is better)
Translates to: ETATSGKGSSPPRPSWEAWPPGN*SQPWSV
Trigger: CACGCTCCAAGGCTGAGACCAGTTCCCTGGAGGCCA...GGCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CCA 90 bp CCAGCCCAGAAAACCAAGAGCTTCCCATTAGCGCAGTCCAGCCCCACGGTGCAGCGGCCGGGAGCTGGGTaGGGGATGGGTTGGGCCTCA +
Preference number: 2 (lower is better)
Translates to: PAQKTKSFPLAQSSPTVQRPGAG*GMGWAS
Trigger: TGAGGCCCAACCCATCCCCCACCCAGCTCCCGGCCG...CTGCACCGTGGGGCTGGACTGCGCTAATGGGAAGCTCTTGGTTTTCTGGGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR TCA 90 bp CACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCCCGAGAAGGCGATGTGTaGCTTCACCGGCCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: HRSHSGGRQELGSSSLPAREGDV*LHRPRE
Trigger: CTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCG...GGCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR TCA 90 bp GAGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCCGACCTCAGAGAGACCTaGCGTTCCCCACGATCTGCT +
Preference number: 2 (lower is better)
Translates to: ETATSGKGSSPPRPSWEADLRET*RSPRSA
Trigger: AGCAGATCGTGGGGAACGTCAGGTCTCTCTGAGGTC...GGCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR GCA 90 bp GGAACCCCACACCCCCTAGGCACCTGCCATCGGGTGTCCTTTGGAGGAAGCCACCTGGTCCTGGGAGCCTaGGGGTCTCACCTCTGCATG +
Preference number: 2 (lower is better)
Translates to: GTPHPLGTCHRVSFGGSHLVLGA*GSHLCM
Trigger: CATGCAGAGGTGAGACCCGCAGGCTCCCAGGACCAG...GTGGCTTCCTCCAAAGGACACCCGATGGCAGGTGCCTAGGGGGTGTGGGGTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CCA 90 bp CACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCCCACGAAAGAGTGAGGTaGGGTCGGGGATGGGGCGAC +
Preference number: 2 (lower is better)
Translates to: HRSHSGGRQELGSSSLPAHERVR*GRGWGD
Trigger: GTCGCCCCATCCCCGACCCCACCTCACTCTTTCGTG...GGCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
3UTR-3UTR CCA 90 bp CACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCCCTCCCTACTGGAGAGTaGGTCCGCCAGGCACAGGTG +
Preference number: 2 (lower is better)
Translates to: HRSHSGGRQELGSSSLPALPTGE*VRQAQV
Trigger: CACCTGTGCCTGGCGGACCCACTCTCCAGTAGGGAG...GGCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
3UTR-3UTR CCA 90 bp GGAGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCATAATGCCGGGTATTTaGCCGGGCAGGGCAGAGGGT +
Preference number: 2 (lower is better)
Translates to: GDSHLREGVITPKALLGGIMPGI*PGRAEG
Trigger: ACCCTCTGCCCTGCCCGGCCAAATACCCGGCATTAT...GCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CCA 90 bp GCCTCATCCCAGCCCTGCCTAGGCCCCAGCCCAGAAAACCAAGAGCTTCCCATTCAGGGCCTGGTAGGATaGGGCCACCCAGCCCACAGC +
Preference number: 2 (lower is better)
Translates to: ASSQPCLGPSPENQELPIQGLVG*GHPAHS
Trigger: GCTGTGGGCTGGGTGGCCCCATCCTACCAGGCCCTG...AATGGGAAGCTCTTGGTTTTCTGGGCTGGGGCCTAGGCAGGGCTGGGATGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CCA 90 bp GAGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCCGAGCTGGGTGGGGGATaGGTTGGGCCTCATTTGAGA +
Preference number: 2 (lower is better)
Translates to: ETATSGKGSSPPRPSWEAELGGG*VGPHLR
Trigger: TCTCAAATGAGGCCCAACCCATCCCCCACCCAGCTC...GGCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR TCA 90 bp TGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGACATTCACGAAAGAGTaGGGTGGGGTCGGGGATGGG +
Preference number: 2 (lower is better)
Translates to: WPGDGKQHRSHSGGRQELTFTKE*GGVGDG
Trigger: CCCATCCCCGACCCCACCTCACTCTTTCGTGAATGT...CAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
3UTR-3UTR GCA 90 bp CCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTAAGAGATCAGTGAGCTaGCAAATGGAGGGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: PGQGTANSTGVTVGAGRSKRSVS*QMEGVG
Trigger: CCCCACCCCCTCCATTTGGCAGCTCACTGATCTCTT...ACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR GCA 90 bp GGCCTCCAGGGAACTGGTCTCAGCCTTGGAGCGTGGGTCCCCAAAGGCAGCAGCTGGGGTCGTCAAGTTTaGCAGCCCCCATCAGCAGAG +
Preference number: 2 (lower is better)
Translates to: GLQGTGLSLGAWVPKGSSWGRQV*QPPSAE
Trigger: CTCTGCTGATGGGGGCTGGCAAACTTGACGACCCCA...GCTGCTGCCTTTGGGGACCCACGCTCCAAGGCTGAGACCAGTTCCCTGGAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR GCA 90 bp CTGCGGGTCTCACCTCTGCATGTGTGCACACAAGGAGTGGGGATGACAGCGTGCTCCAGGGGTGCTGTCTaGCCCCTGCTCTCTGTCCCC +
Preference number: 2 (lower is better)
Translates to: LRVSPLHVCTQGVGMTACSRGAV*PLLSVP
Trigger: GGGGACAGAGAGCAGGGGGCAGACAGCACCCCTGGA...GCACGCTGTCATCCCCACTCCTTGTGTGCACACATGCAGAGGTGAGACCCGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR GCA 90 bp GCCTCATCCCAGCCCTGCCTAGGCCCCAGCCCAGAAAACCAAGAGCTTCCCATTGGAGGACTCCAGGGGTaGTGTCTGCCCCCTGCTCTC +
Preference number: 2 (lower is better)
Translates to: ASSQPCLGPSPENQELPIGGLQG*CLPPAL
Trigger: GAGAGCAGGGGGCAGACAGCACCCCTGGAGTCCTCC...AATGGGAAGCTCTTGGTTTTCTGGGCTGGGGCCTAGGCAGGGCTGGGATGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR TCA 90 bp GGAACCCCACACCCCCTAGGCACCTGCCATCGGGTGTCCTTTGGAGGAAGCCACGACCTCAGAGAGACCTaGCGTTCCCCACGATCTGCT +
Preference number: 2 (lower is better)
Translates to: GTPHPLGTCHRVSFGGSHDLRET*RSPRSA
Trigger: AGCAGATCGTGGGGAACGTCAGGTCTCTCTGAGGTC...GTGGCTTCCTCCAAAGGACACCCGATGGCAGGTGCCTAGGGGGTGTGGGGTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR GCA 90 bp GACTCCACCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGAAGAGATCAGTGAGCTaGCAAATGGAGGGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: DSTILARGRQTAPESQWGKRSVS*QMEGVG
Trigger: CCCCACCCCCTCCATTTGGCAGCTCACTGATCTCTT...CCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGGTGGAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR GCA 90 bp ACCCTGGAGTCCCTGGGAAATTGGTGGTGGGGGTTGTACAAGCCTCATCCCAGCGGAGGACTCCAGGGGTaGTGTCTGCCCCCTGCTCTC +
Preference number: 2 (lower is better)
Translates to: TLESLGNWWWGLYKPHPSGGLQG*CLPPAL
Trigger: GAGAGCAGGGGGCAGACAGCACCCCTGGAGTCCTCC...GCTGGGATGAGGCTTGTACAACCCCCACCACCAATTTCCCAGGGACTCCAGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CCA 90 bp TGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGTCCGCCAGGCACAGGTaGGTGGAGAACATTCACGAA +
Preference number: 2 (lower is better)
Translates to: WPGDGKQHRSHSGGRQELSARHR*VENIHE
Trigger: TTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGA...CAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
3UTR-3UTR CCA 90 bp GCCTCATCCCAGCCCTGCCTAGGCCCCAGCCCAGAAAACCAAGAGCTTCCCATTCTCCCTACTGGAGAGTaGGTCCGCCAGGCACAGGTG +
Preference number: 2 (lower is better)
Translates to: ASSQPCLGPSPENQELPILPTGE*VRQAQV
Trigger: CACCTGTGCCTGGCGGACCCACTCTCCAGTAGGGAG...AATGGGAAGCTCTTGGTTTTCTGGGCTGGGGCCTAGGCAGGGCTGGGATGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
3UTR-3UTR CCA 90 bp GCCTCATCCCAGCCCTGCCTAGGCCCCAGCCCAGAAAACCAAGAGCTTCCCATTACCAGGGAAACGGGGTaGGGGTTGGCATTGGGAGGG +
Preference number: 2 (lower is better)
Translates to: ASSQPCLGPSPENQELPITRETG*GLALGG
Trigger: CCCTCCCAATGCCAACCCCCACCCCGTTTCCCTGGT...AATGGGAAGCTCTTGGTTTTCTGGGCTGGGGCCTAGGCAGGGCTGGGATGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CCA 90 bp CCAGCCCAGAAAACCAAGAGCTTCCCATTAGCGCAGTCCAGCCCCACGGTGCAGGCAGGAGAAATGGGATaGCAGCCCCAGCTGCCCCAG +
Preference number: 2 (lower is better)
Translates to: PAQKTKSFPLAQSSPTVQAGEMG*QPQLPQ
Trigger: CTGGGGCAGCTGGGGCTGCCATCCCATTTCTCCTGC...CTGCACCGTGGGGCTGGACTGCGCTAATGGGAAGCTCTTGGTTTTCTGGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR TCA 90 bp CAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTCGAGAAGGCGATGTGTaGCTTCACCGGCCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: QTAPESQWGQAGVGVVKFREGDV*LHRPRE
Trigger: CTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCG...AAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CCA 90 bp CAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTCTCCCTACTGGAGAGTaGGTCCGCCAGGCACAGGTG +
Preference number: 2 (lower is better)
Translates to: QTAPESQWGQAGVGVVKFLPTGE*VRQAQV
Trigger: CACCTGTGCCTGGCGGACCCACTCTCCAGTAGGGAG...AAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
3UTR-3UTR CCA 90 bp GACCTGACCTCAGAGAGACCTGACGTTCCCCACGATCTGCTAGGAGGACTCCAGAGGGCAGAGGGTGCCTaGGGCAGACTCCACCATCCT +
Preference number: 2 (lower is better)
Translates to: DLTSERPDVPHDLLGGLQRAEGA*GRLHHP
Trigger: AGGATGGTGGAGTCTGCCCCAGGCACCCTCTGCCCT...CTGGAGTCCTCCTAGCAGATCGTGGGGAACGTCAGGTCTCTCTGAGGTCAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CCA 90 bp GGTCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTCGGCCGGGAGCTGGGTaGGGGATGGGTTGGGCCTCA +
Preference number: 2 (lower is better)
Translates to: GHTASPTNPQWCQVKFIVRPGAG*GMGWAS
Trigger: TGAGGCCCAACCCATCCCCCACCCAGCTCCCGGCCG...AACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CCA 90 bp GGAGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCCTGGGAAATTGGTGGTaGGGGTTGTACAAGCCTCAT +
Preference number: 2 (lower is better)
Translates to: GDSHLREGVITPKALLGGLGNWW*GLYKPH
Trigger: ATGAGGCTTGTACAACCCCCACCACCAATTTCCCAG...GCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CCA 90 bp GGAACCCCACACCCCCTAGGCACCTGCCATCGGGTGTCCTTTGGAGGAAGCCACGTCAATGGCAAGGGTTaGCCTCCTCATGGAGACAGC +
Preference number: 2 (lower is better)
Translates to: GTPHPLGTCHRVSFGGSHVNGKG*PPHGDS
Trigger: GCTGTCTCCATGAGGAGGCCAACCCTTGCCATTGAC...GTGGCTTCCTCCAAAGGACACCCGATGGCAGGTGCCTAGGGGGTGTGGGGTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR TCA 90 bp CCAGCCCAGAAAACCAAGAGCTTCCCATTAGCGCAGTCCAGCCCCACGGTGCAGGAGGCAAGAGATCAGTaGGCTGCCAAATGGAGGGGG +
Preference number: 2 (lower is better)
Translates to: PAQKTKSFPLAQSSPTVQEARDQ*AAKWRG
Trigger: CCCCCTCCATTTGGCAGCTCACTGATCTCTTGCCTC...CTGCACCGTGGGGCTGGACTGCGCTAATGGGAAGCTCTTGGTTTTCTGGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR TCA 90 bp ACCCTGGAGTCCCTGGGAAATTGGTGGTGGGGGTTGTACAAGCCTCATCCCAGCGGGTTGGGCCTCATTTaGGACAGAGAGCAGGTGGGC +
Preference number: 2 (lower is better)
Translates to: TLESLGNWWWGLYKPHPSGLGLI*DREQVG
Trigger: GCCCACCTGCTCTCTGTCTCAAATGAGGCCCAACCC...GCTGGGATGAGGCTTGTACAACCCCCACCACCAATTTCCCAGGGACTCCAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR GCA 90 bp CAAGGAGTGGGGATGACAGCGTGCTGGGTGTTGGGAGGATTCAACAAGAAAGTGAGTCCAGCCCCACGGTaGAGGGCCCCACCCACCTTC +
Preference number: 2 (lower is better)
Translates to: QGVGMTACWVLGGFNKKVSPAPR*RAPPTF
Trigger: GAAGGTGGGTGGGGCCCTGCACCGTGGGGCTGGACT...CACTTTCTTGTTGAATCCTCCCAACACCCAGCACGCTGTCATCCCCACTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR GCA 90 bp GGTCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTAGTCCAGCCCCACGGTaGAGGGCCCCACCCACCTTC +
Preference number: 2 (lower is better)
Translates to: GHTASPTNPQWCQVKFIVSPAPR*RAPPTF
Trigger: GAAGGTGGGTGGGGCCCTGCACCGTGGGGCTGGACT...AACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CCA 90 bp CTGCGGGTCTCACCTCTGCATGTGTGCACACAAGGAGTGGGGATGACAGCGTGCATAATGCCGGGTATTTaGCCGGGCAGGGCAGAGGGT +
Preference number: 2 (lower is better)
Translates to: LRVSPLHVCTQGVGMTACIMPGI*PGRAEG
Trigger: ACCCTCTGCCCTGCCCGGCCAAATACCCGGCATTAT...GCACGCTGTCATCCCCACTCCTTGTGTGCACACATGCAGAGGTGAGACCCGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CCA 90 bp GCCTCATCCCAGCCCTGCCTAGGCCCCAGCCCAGAAAACCAAGAGCTTCCCATTTGGCATTGGGAGGGCTaGAGGATACTGGCCTCAGAC +
Preference number: 2 (lower is better)
Translates to: ASSQPCLGPSPENQELPIWHWEG*RILASD
Trigger: GTCTGAGGCCAGTATCCTCCAGCCCTCCCAATGCCA...AATGGGAAGCTCTTGGTTTTCTGGGCTGGGGCCTAGGCAGGGCTGGGATGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CCA 90 bp ACCCTGGAGTCCCTGGGAAATTGGTGGTGGGGGTTGTACAAGCCTCATCCCAGCCAGAGGCAGGAGAAATaGGATGGCAGCCCCAGCTGC +
Preference number: 2 (lower is better)
Translates to: TLESLGNWWWGLYKPHPSQRQEK*DGSPSC
Trigger: GCAGCTGGGGCTGCCATCCCATTTCTCCTGCCTCTG...GCTGGGATGAGGCTTGTACAACCCCCACCACCAATTTCCCAGGGACTCCAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR TCA 90 bp ACCCTGGAGTCCCTGGGAAATTGGTGGTGGGGGTTGTACAAGCCTCATCCCAGCTACTGGCCTCAGACCTaGCCTCAGAGAGACCTGACG +
Preference number: 2 (lower is better)
Translates to: TLESLGNWWWGLYKPHPSYWPQT*PQRDLT
Trigger: CGTCAGGTCTCTCTGAGGTCAGGTCTGAGGCCAGTA...GCTGGGATGAGGCTTGTACAACCCCCACCACCAATTTCCCAGGGACTCCAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CCA 90 bp GTCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTTTGCCGGGGCACAGGGTaGGTGGCCTCCAGGGAACTG +
Preference number: 2 (lower is better)
Translates to: VTRPLPPTPSGAKSNLLFCRGTG*VASREL
Trigger: CAGTTCCCTGGAGGCCACCCACCCTGTGCCCCGGCA...AAACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR TCA 90 bp TCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTTTCCCTGCATCTGGGCCTaGCGTAACGCACGCGGGTCC +
Preference number: 2 (lower is better)
Translates to: SHGLSHQPPVVPSQIYCFPCIWA*RNARGS
Trigger: GGACCCGCGTGCGTTACGTCAGGCCCAGATGCAGGG...AAAACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR GCA 90 bp CAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTAAGAGATCAGTGAGCTaGCAAATGGAGGGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: QTAPESQWGQAGVGVVKFKRSVS*QMEGVG
Trigger: CCCCACCCCCTCCATTTGGCAGCTCACTGATCTCTT...AAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR GCA 90 bp GGTCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTCTGGTCCTGGGAGCCTaGGGGTCTCACCTCTGCATG +
Preference number: 2 (lower is better)
Translates to: GHTASPTNPQWCQVKFIVLVLGA*GSHLCM
Trigger: CATGCAGAGGTGAGACCCGCAGGCTCCCAGGACCAG...AACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR GCA 90 bp TCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTTTCCCTGCCCTTGTGGCTaGTGGTCCTGGGAGCCTGCG +
Preference number: 2 (lower is better)
Translates to: SHGLSHQPPVVPSQIYCFPCPCG*WSWEPA
Trigger: CGCAGGCTCCCAGGACCAGCAGCCACAAGGGCAGGG...AAAACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CCA 90 bp GGTCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTACCAGGGAAACGGGGTaGGGGTTGGCATTGGGAGGG +
Preference number: 2 (lower is better)
Translates to: GHTASPTNPQWCQVKFIVTRETG*GLALGG
Trigger: CCCTCCCAATGCCAACCCCCACCCCGTTTCCCTGGT...AACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CCA 90 bp TGCACACAAGGAGTGGGGATGACAGCGTGCTGGGTGTTGGGAGGATTCAACAAGGAGAGGTGGGTTCTCTaGGCACCAGGGAAACGGGGT +
Preference number: 2 (lower is better)
Translates to: CTQGVGMTACWVLGGFNKERWVL*APGKRG
Trigger: ACCCCGTTTCCCTGGTGCCCAGAGAACCCACCTCTC...CTTGTTGAATCCTCCCAACACCCAGCACGCTGTCATCCCCACTCCTTGTGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR CAA 90 bp CTGCATGTGTGCACACAAGGAGTGGGGATGACAGCGTGCTGGGTGTaGGGAGGATTCAACAAGAAAGTGTCCAGGTGGTGCCTGGTCTGG +
Preference number: 2 (lower is better)
Translates to: LHVCTQGVGMTACWV*GGFNKKVSRWCLVW
Trigger: CCAGACCAGGCACCACCTGGACACTTTCTTGTTGAATCCTCCCAACACCCAGCACGCTGTCATCCCCACTCCTTGTGTGCACACATGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR TCA 90 bp GTCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTTACCCCATTTGCCCGGTaGGGTGGTCCCTGTCCCTTG +
Preference number: 2 (lower is better)
Translates to: VTRPLPPTPSGAKSNLLFTPFAR*GGPCPL
Trigger: CAAGGGACAGGGACCACCTCACCGGGCAAATGGGGT...AAACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR GCA 90 bp GTCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTTCTGGTCCTGGGAGCCTaGGGGTCTCACCTCTGCATG +
Preference number: 2 (lower is better)
Translates to: VTRPLPPTPSGAKSNLLFLVLGA*GSHLCM
Trigger: CATGCAGAGGTGAGACCCGCAGGCTCCCAGGACCAG...AAACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CCA 90 bp GGTCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTGAGAGGTGGGTTCTCTaGGCACCAGGGAAACGGGGT +
Preference number: 2 (lower is better)
Translates to: GHTASPTNPQWCQVKFIVERWVL*APGKRG
Trigger: ACCCCGTTTCCCTGGTGCCCAGAGAACCCACCTCTC...AACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CCA 90 bp GTCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTTTGGCCTCCAGGGAACTaGTCTCAGCCTTGGAGCGTG +
Preference number: 2 (lower is better)
Translates to: VTRPLPPTPSGAKSNLLFWPPGN*SQPWSV
Trigger: CACGCTCCAAGGCTGAGACCAGTTCCCTGGAGGCCA...AAACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR GCA 90 bp GGTCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTAAGAGATCAGTGAGCTaGCAAATGGAGGGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: GHTASPTNPQWCQVKFIVKRSVS*QMEGVG
Trigger: CCCCACCCCCTCCATTTGGCAGCTCACTGATCTCTT...AACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CCA 90 bp TCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTTTCAGAGGCAGGAGAAATaGGATGGCAGCCCCAGCTGC +
Preference number: 2 (lower is better)
Translates to: SHGLSHQPPVVPSQIYCFQRQEK*DGSPSC
Trigger: GCAGCTGGGGCTGCCATCCCATTTCTCCTGCCTCTG...AAAACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CCA 90 bp TCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTTTGGACCCTGGAGTCCCTaGGAAATTGGTGGTGGGGGT +
Preference number: 2 (lower is better)
Translates to: SHGLSHQPPVVPSQIYCFGPWSP*EIGGGG
Trigger: ACCCCCACCACCAATTTCCCAGGGACTCCAGGGTCC...AAAACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CCA 90 bp TCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTTTTGGCATTGGGAGGGCTaGAGGATACTGGCCTCAGAC +
Preference number: 2 (lower is better)
Translates to: SHGLSHQPPVVPSQIYCFWHWEG*RILASD
Trigger: GTCTGAGGCCAGTATCCTCCAGCCCTCCCAATGCCA...AAAACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CCA 90 bp GGTCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTTCCCTGGGAAATTGGTaGTGGGGGTTGTACAAGCCT +
Preference number: 2 (lower is better)
Translates to: GHTASPTNPQWCQVKFIVSLGNW*WGLYKP
Trigger: AGGCTTGTACAACCCCCACCACCAATTTCCCAGGGA...AACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR CCA 72 bp TGGTCCCTGTCCCTTGACCACTCGCCGGGCCGGGCCTaGCCTGGGTCCAGGTGGCCACGGTCAATGGCAAGG +
Preference number: 3 (lower is better)
Translates to: WSLSLDHSPGRA*PGSRWPRSMAR
Trigger: CCTTGCCATTGACCGTGGCCACCTGGACCCAGGCCAGGCCCGGCCCGGCGAGTGGTCAAGGGACAGGGACCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CAA 90 bp CTGCCCCAGGTAGGAGGACGGCCGGGAGCTGGGTGGGGGATGGGTTGGGCCTCAGGGGGCAGGCAGGAGTaGGGGTCGTCAAGTTTGCCA +
Preference number: 3 (lower is better)
Translates to: LPQVGGRPGAGWGMGWASGGRQE*GSSSLP
Trigger: TGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCC...TGAGGCCCAACCCATCCCCCACCCAGCTCCCGGCCGTCCTCCTACCTGGGGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR CCA 72 bp GTGACTTCACCGGCCCAGGGAGCTTCGTGTCAGGGATaGCCCGGCCCCTCCCTACTGGAGAGTGGGTCCGCC +
Preference number: 3 (lower is better)
Translates to: VTSPAQGASCQG*PGPSLLESGSA
Trigger: GGCGGACCCACTCTCCAGTAGGGAGGGGCCGGGCCATCCCTGACACGAAGCTCCCTGGGCCGGTGAAGTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
3UTR CCA 72 bp CCCACACCCCCTAGGCACCTGCCATCGGGTGTCCTTTaGAGGAAGCCACCTCCCCTCCTGCCCGAGGAGAGG +
Preference number: 3 (lower is better)
Translates to: PTPPRHLPSGVL*RKPPPLLPEER
Trigger: CCTCTCCTCGGGCAGGAGGGGAGGTGGCTTCCTCCAAAGGACACCCGATGGCAGGTGCCTAGGGGGTGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR TCA 72 bp CAGGAGGCCTTGGAAAAGCCGCCCTGCATCTGGGCCTaGCGTAACGCACGCGGGTCCAGGGCTGCTGAGCAG +
Preference number: 3 (lower is better)
Translates to: QEALEKPPCIWA*RNARGSRAAEQ
Trigger: CTGCTCAGCAGCCCTGGACCCGCGTGCGTTACGTCAGGCCCAGATGCAGGGCGGCTTTTCCAAGGCCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CAA 90 bp AGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCCTGGGGGCAGGCAGGAGTaGGGGTCGTCAAGTTTGCCA +
Preference number: 3 (lower is better)
Translates to: RQPPQGRGHHPQGPPGRPGGRQE*GSSSLP
Trigger: TGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCC...AGGCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CAA 90 bp AGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCCTGAACTGGTCTCAGCCTaGGAGCGTGGGTCCCCAAAG +
Preference number: 3 (lower is better)
Translates to: RQPPQGRGHHPQGPPGRPELVSA*ERGSPK
Trigger: CTTTGGGGACCCACGCTCCAAGGCTGAGACCAGTTC...AGGCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CAA 90 bp GGAACCCCACACCCCCTAGGCACCTGCCATCGGGTGTCCTTTGGAGGAAGCCACCCCCATCAGGAGGCCTaGGAAAAGCCGCCCTGCATC +
Preference number: 3 (lower is better)
Translates to: GTPHPLGTCHRVSFGGSHPHQEA*EKPPCI
Trigger: GATGCAGGGCGGCTTTTCCAAGGCCTCCTGATGGGG...GTGGCTTCCTCCAAAGGACACCCGATGGCAGGTGCCTAGGGGGTGTGGGGTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR CCA 72 bp CACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTaGGGTCGGGGATGGGGCGACAGGGACCAGCAGGGC +
Preference number: 3 (lower is better)
Translates to: HRWVENIHERVR*GRGWGDRDQQG
Trigger: GCCCTGCTGGTCCCTGTCGCCCCATCCCCGACCCCACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
3UTR CCA 72 bp AACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTaGGGTCGTCAAGTTTGCCAGCCCCCATCAGCAGAG +
Preference number: 3 (lower is better)
Translates to: NSTGVTVGAGRS*GRQVCQPPSAE
Trigger: CTCTGCTGATGGGGGCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CAA 90 bp GAGTCCCTGGGAAATTGGTGGTGGGGGTTGTACAAGCCTCATCCCAGCCCTGCCGAACTGGTCTCAGCCTaGGAGCGTGGGTCCCCAAAG +
Preference number: 3 (lower is better)
Translates to: ESLGNWWWGLYKPHPSPAELVSA*ERGSPK
Trigger: CTTTGGGGACCCACGCTCCAAGGCTGAGACCAGTTC...GGCAGGGCTGGGATGAGGCTTGTACAACCCCCACCACCAATTTCCCAGGGACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CAA 90 bp CCAGCCCAGAAAACCAAGAGCTTCCCATTAGCGCAGTCCAGCCCCACGGTGCAGTTGGGGTCGTCAAGTTaGCCAGCCCCCATCAGCAGA +
Preference number: 3 (lower is better)
Translates to: PAQKTKSFPLAQSSPTVQLGSSS*PAPISR
Trigger: TCTGCTGATGGGGGCTGGCAAACTTGACGACCCCAA...CTGCACCGTGGGGCTGGACTGCGCTAATGGGAAGCTCTTGGTTTTCTGGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CAA 90 bp GGTCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTCCCCATCAGGAGGCCTaGGAAAAGCCGCCCTGCATC +
Preference number: 3 (lower is better)
Translates to: GHTASPTNPQWCQVKFIVPHQEA*EKPPCI
Trigger: GATGCAGGGCGGCTTTTCCAAGGCCTCCTGATGGGG...AACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CAA 90 bp GTCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTTGGGGGCAGGCAGGAGTaGGGGTCGTCAAGTTTGCCA +
Preference number: 3 (lower is better)
Translates to: VTRPLPPTPSGAKSNLLFGGRQE*GSSSLP
Trigger: TGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCC...AAACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CAA 90 bp TCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTTTCATAATGCCGGGTATTaGGCCGGGCAGGGCAGAGGG +
Preference number: 3 (lower is better)
Translates to: SHGLSHQPPVVPSQIYCFHNAGY*AGQGRG
Trigger: CCCTCTGCCCTGCCCGGCCAAATACCCGGCATTATG...AAAACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR-3UTR CAA 90 bp GGTCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTAATTGGTGGTGGGGGTaGTACAAGCCTCATCCCAGC +
Preference number: 3 (lower is better)
Translates to: GHTASPTNPQWCQVKFIVNWWWG*YKPHPS
Trigger: GCTGGGATGAGGCTTGTACAACCCCCACCACCAATT...AACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp CTGCCCCAGGTAGGAGGACGGCCGGGAGCTGGGTGGGGGATGGGTTGGGCCTCACACTCTGCAGGGCGCTaGGGCCCTGGCCCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: LPQVGGRPGAGWGMGWASHSAGR*GPGPAC
Trigger: GCACGCTGGGCCAGGGCCTCAGCGCCCTGCAGAGTG...TGAGGCCCAACCCATCCCCCACCCAGCTCCCGGCCGTCCTCCTACCTGGGGCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp GGCCCAGGGAGCTTCGTGTCAGGGATGGCCCGGCCCCTCCCTACTGGAGAGTGGCACTCTGCAGGGCGCTaGGGCCCTGGCCCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: GPGSFVSGMARPLPTGEWHSAGR*GPGPAC
Trigger: GCACGCTGGGCCAGGGCCTCAGCGCCCTGCAGAGTG...CCACTCTCCAGTAGGGAGGGGCCGGGCCATCCCTGACACGAAGCTCCCTGGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR TCA 90 bp ACCGGCCCAGGGAGCTTCGTGTCAGGGATGGCCCGGCCCCTCCCTACTGGAGAGGTGGTCCCTGTCCCTTaGCCACTCGCCGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: TGPGSFVSGMARPLPTGEVVPVP*PLAGPG
Trigger: GCCCGGCCCGGCGAGTGGTCAAGGGACAGGGACCAC...CTCTCCAGTAGGGAGGGGCCGGGCCATCCCTGACACGAAGCTCCCTGGGCCGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR TCA 90 bp GGAGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCCACTCTGCAGGGCGCTaGGGCCCTGGCCCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: GDSHLREGVITPKALLGGHSAGR*GPGPAC
Trigger: GCACGCTGGGCCAGGGCCTCAGCGCCCTGCAGAGTG...GCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp CCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTCCGTCCTCCCGGCGCTaGAACACCGTCCAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: PGQGTANSTGVTVGAGRSPSSRR*NTVQPP
Trigger: CGGCGGCTGGACGGTGTTTCAGCGCCGGGAGGACGG...ACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp GAGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCCCCGTCCTCCCGGCGCTaGAACACCGTCCAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: ETATSGKGSSPPRPSWEAPSSRR*NTVQPP
Trigger: CGGCGGCTGGACGGTGTTTCAGCGCCGGGAGGACGG...GGCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp CTGCCCCAGGTAGGAGGACGGCCGGGAGCTGGGTGGGGGATGGGTTGGGCCTCACGTGGCTGGGCCTGGTaGTCTGTCAGCGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LPQVGGRPGAGWGMGWASRGWAW*SVSACS
Trigger: GCTGCAGGCGCTGACAGAGCACCAGGCCCAGCCACG...TGAGGCCCAACCCATCCCCCACCCAGCTCCCGGCCGTCCTCCTACCTGGGGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTAGGGCGCTGAGGCCCTaGCCCAGCGTGCCATGCCCC +
Preference number: 4 (lower is better)
Translates to: PGQGTANSTGVTVGAGRSRALRP*PSVPCP
Trigger: GGGGCATGGCACGCTGGGCCAGGGCCTCAGCGCCCT...ACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CTGCCCCAGGTAGGAGGACGGCCGGGAGCTGGGTGGGGGATGGGTTGGGCCTCATGCCGGGGCACAGGGTaGGTGGCCTCCAGGGAACTG +
Preference number: 4 (lower is better)
Translates to: LPQVGGRPGAGWGMGWASCRGTG*VASREL
Trigger: CAGTTCCCTGGAGGCCACCCACCCTGTGCCCCGGCA...TGAGGCCCAACCCATCCCCCACCCAGCTCCCGGCCGTCCTCCTACCTGGGGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp GGCCCAGGGAGCTTCGTGTCAGGGATGGCCCGGCCCCTCCCTACTGGAGAGTGGCCGCCCTTTCCACAGTaGCCAGGGCGCTGTTGGCGC +
Preference number: 4 (lower is better)
Translates to: GPGSFVSGMARPLPTGEWPPFPQ*PGRCWR
Trigger: GCGCCAACAGCGCCCTGGTCACTGTGGAAAGGGCGG...CCACTCTCCAGTAGGGAGGGGCCGGGCCATCCCTGACACGAAGCTCCCTGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR TCA 90 bp CACCGGCCCAGGGAGCTTCGTGTCAGGGATGGCCCGGCCCCTCCCTACTGGAGACGGGCAGGCGCTCTCTaGAGGTCGGCCTTGTTGCGG +
Preference number: 4 (lower is better)
Translates to: HRPRELRVRDGPAPPYWRRAGAL*RSALLR
Trigger: CCGCAACAAGGCCGACCTTCAGAGAGCGCCTGCCCG...TCTCCAGTAGGGAGGGGCCGGGCCATCCCTGACACGAAGCTCCCTGGGCCGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR GCA 90 bp ACTCCACCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCGAAGGTCGGCCTTGTTaGGGGGCCGGCCCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: TPPSWPGDGKQHRSHSGGEGRPC*GAGPAP
Trigger: GGGGGCTGGGCCGGCCCCGCAACAAGGCCGACCTTC...GCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGGTGGAGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp CTGCCCCAGGTAGGAGGACGGCCGGGAGCTGGGTGGGGGATGGGTTGGGCCTCAAGCGGTCCTAGCCAGTaGTCCCCGGTGAGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: LPQVGGRPGAGWGMGWASSGPSQ*SPVSLP
Trigger: TGGCAGGCTCACCGGGGAGCACTGGCTAGGACCGCT...TGAGGCCCAACCCATCCCCCACCCAGCTCCCGGCCGTCCTCCTACCTGGGGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000444139.5
CDS-3UTR CCA 90 bp CCAGGGAGCTTCGTGTCAGGGATGGCCCGGCCCCTCCCTACTGGAGAGTGGGTCGCCGTGCCCGGCGCGTaGGCGTGGTTCAGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: PGSFVSGMARPLPTGEWVAVPGA*AWFRKS
Trigger: GCTCTTCCTGAACCACGCCCACGCGCCGGGCACGGC...GACCCACTCTCCAGTAGGGAGGGGCCGGGCCATCCCTGACACGAAGCTCCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp GGCCCAGGGAGCTTCGTGTCAGGGATGGCCCGGCCCCTCCCTACTGGAGAGTGGGTCGCCCACCAGCCGTaGCTGGGCCTGGTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: GPGSFVSGMARPLPTGEWVAHQP*LGLVLC
Trigger: ACAGAGCACCAGGCCCAGCCACGGCTGGTGGGCGAC...CCACTCTCCAGTAGGGAGGGGCCGGGCCATCCCTGACACGAAGCTCCCTGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp ACCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAAGGGCGCTGAGGCCCTaGCCCAGCGTGCCATGCCCC +
Preference number: 4 (lower is better)
Translates to: TILARGRQTAPESQWGQARALRP*PSVPCP
Trigger: GGGGCATGGCACGCTGGGCCAGGGCCTCAGCGCCCT...TGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp CCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGCCGCCCTTTCCACAGTaGCCAGGGCGCTGTTGGCGC +
Preference number: 4 (lower is better)
Translates to: PSWPGDGKQHRSHSGGRQPPFPQ*PGRCWR
Trigger: GCGCCAACAGCGCCCTGGTCACTGTGGAAAGGGCGG...CTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp CCTGCTCTCTGTCCCCATAATGCCGGGTATTTGGCCGGGCAGGGCAGAGGGTGCCCGTCCTCCCGGCGCTaGAACACCGTCCAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: PALCPHNAGYLAGQGRGCPSSRR*NTVQPP
Trigger: CGGCGGCTGGACGGTGTTTCAGCGCCGGGAGGACGG...GCACCCTCTGCCCTGCCCGGCCAAATACCCGGCATTATGGGGACAGAGAGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp CCAGGGAGCTTCGTGTCAGGGATGGCCCGGCCCCTCCCTACTGGAGAGTGGGTCGCCAGTGCTCCCCGGTaGGCCTGCCAAAGCCGTCTC +
Preference number: 4 (lower is better)
Translates to: PGSFVSGMARPLPTGEWVASAPR*ACQSRL
Trigger: GAGACGGCTTTGGCAGGCTCACCGGGGAGCACTGGC...GACCCACTCTCCAGTAGGGAGGGGCCGGGCCATCCCTGACACGAAGCTCCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR TCA 90 bp CACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCCGTGGTCCCTGTCCCTTaGCCACTCGCCGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: HRSHSGGRQELGSSSLPAVVPVP*PLAGPG
Trigger: GCCCGGCCCGGCGAGTGGTCAAGGGACAGGGACCAC...GGCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp ACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCCCGGCGAGGCGCGCCGCTaGGGAGCGCAAAGGAGACGG +
Preference number: 4 (lower is better)
Translates to: TGVTVGAGRSWGRQVCQPGEARR*GAQRRR
Trigger: CCGTCTCCTTTGCGCTCCGCAGCGGCGCGCCTCGCC...GGGCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372338.9
CDS-3UTR GCA 90 bp GAGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCCTGCTCTGTCAGCGCCTaGAGCACCGAGGCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: ETATSGKGSSPPRPSWEACSVSA*STEAWA
Trigger: CGCCCAGGCCTCGGTGCTGCAGGCGCTGACAGAGCA...GGCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp CGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGGAAGGTCGGCCTTGTTaGGGGGCCGGCCCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: RQTAPESQWGQAGVGVVKEGRPC*GAGPAP
Trigger: GGGGGCTGGGCCGGCCCCGCAACAAGGCCGACCTTC...CTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp GCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCGAAGGTCGGCCTTGTTaGGGGGCCGGCCCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: APESQWGQAGVGVVKFASEGRPC*GAGPAP
Trigger: GGGGGCTGGGCCGGCCCCGCAACAAGGCCGACCTTC...GCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp CCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGCCCTGCCCTTGTGGCTaGTGGTCCTGGGAGCCTGCG +
Preference number: 4 (lower is better)
Translates to: PSWPGDGKQHRSHSGGRQPCPCG*WSWEPA
Trigger: CGCAGGCTCCCAGGACCAGCAGCCACAAGGGCAGGG...CTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp CCAGGGAGCTTCGTGTCAGGGATGGCCCGGCCCCTCCCTACTGGAGAGTGGGTCCCCTGCCCTTGTGGCTaGTGGTCCTGGGAGCCTGCG +
Preference number: 4 (lower is better)
Translates to: PGSFVSGMARPLPTGEWVPCPCG*WSWEPA
Trigger: CGCAGGCTCCCAGGACCAGCAGCCACAAGGGCAGGG...GACCCACTCTCCAGTAGGGAGGGGCCGGGCCATCCCTGACACGAAGCTCCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp GGAACCCCACACCCCCTAGGCACCTGCCATCGGGTGTCCTTTGGAGGAAGCCACAGTGCTGACGACAGGTaGGGGCGCCGTGCCCGGCGC +
Preference number: 4 (lower is better)
Translates to: GTPHPLGTCHRVSFGGSHSADDR*GRRARR
Trigger: GCGCCGGGCACGGCGCCCCCACCTGTCGTCAGCACT...GTGGCTTCCTCCAAAGGACACCCGATGGCAGGTGCCTAGGGGGTGTGGGGTTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp ACTCCACCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCTGCAGCACCGAGGCCTaGGCGCTCTCCAGGCGTGCG +
Preference number: 4 (lower is better)
Translates to: TPPSWPGDGKQHRSHSGGCSTEA*ALSRRA
Trigger: CGCACGCCTGGAGAGCGCCCAGGCCTCGGTGCTGCA...GCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGGTGGAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GGAGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCCCCACCAGCCGTGGCTaGGCCTGGTGCTCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: GDSHLREGVITPKALLGGPTSRG*AWCSVS
Trigger: GCTGACAGAGCACCAGGCCCAGCCACGGCTGGTGGG...GCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGTCGCCCACCAGCCGTaGCTGGGCCTGGTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: PSWPGDGKQHRSHSGGRQVAHQP*LGLVLC
Trigger: ACAGAGCACCAGGCCCAGCCACGGCTGGTGGGCGAC...CTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GAGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCCAGCAGCTCCTGCTCCTaGTCGCCCACCAGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: ETATSGKGSSPPRPSWEASSSCS*SPTSRG
Trigger: GCCACGGCTGGTGGGCGACCAGGAGCAGGAGCTGCT...GGCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CCAGGGAGCTTCGTGTCAGGGATGGCCCGGCCCCTCCCTACTGGAGAGTGGGTCAGCAGCTCCTGCTCCTaGTCGCCCACCAGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: PGSFVSGMARPLPTGEWVSSSCS*SPTSRG
Trigger: GCCACGGCTGGTGGGCGACCAGGAGCAGGAGCTGCT...GACCCACTCTCCAGTAGGGAGGGGCCGGGCCATCCCTGACACGAAGCTCCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp GGGACGGCGAGAAGGCGATGTGTGACTTCACCGGCCCAGGGAGCTTCGTGTCAGAGGGCGCTGAGGCCCTaGCCCAGCGTGCCATGCCCC +
Preference number: 4 (lower is better)
Translates to: GTARRRCVTSPAQGASCQRALRP*PSVPCP
Trigger: GGGGCATGGCACGCTGGGCCAGGGCCTCAGCGCCCT...CTGACACGAAGCTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCGCCGTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GACTCCACCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCCGGCCCCTCCCTACTaGAGAGTGGGTCCGCCAGGC +
Preference number: 4 (lower is better)
Translates to: DSTILARGRQTAPESQWGPAPPY*RVGPPG
Trigger: GCCTGGCGGACCCACTCTCCAGTAGGGAGGGGCCGG...CCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGGTGGAGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CTGCCCCAGGTAGGAGGACGGCCGGGAGCTGGGTGGGGGATGGGTTGGGCCTCAGCAGGAGAAATGGGATaGCAGCCCCAGCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LPQVGGRPGAGWGMGWASAGEMG*QPQLPQ
Trigger: CTGGGGCAGCTGGGGCTGCCATCCCATTTCTCCTGC...TGAGGCCCAACCCATCCCCCACCCAGCTCCCGGCCGTCCTCCTACCTGGGGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp ACTCCACCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCGCCAGTGCTCCCCGGTaGGCCTGCCAAAGCCGTCTC +
Preference number: 4 (lower is better)
Translates to: TPPSWPGDGKQHRSHSGGASAPR*ACQSRL
Trigger: GAGACGGCTTTGGCAGGCTCACCGGGGAGCACTGGC...GCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGGTGGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp CTGCCCCAGGTAGGAGGACGGCCGGGAGCTGGGTGGGGGATGGGTTGGGCCTCACACAAGGAGTGGGGATaGCAGCGTGCTGGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: LPQVGGRPGAGWGMGWASHKEWG*QRAGCW
Trigger: CCAACACCCAGCACGCTGTCATCCCCACTCCTTGTG...TGAGGCCCAACCCATCCCCCACCCAGCTCCCGGCCGTCCTCCTACCTGGGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp TGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGCCCTGCATCTGGGCCTaGCGTAACGCACGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: WPGDGKQHRSHSGGRQELPCIWA*RNARGS
Trigger: GGACCCGCGTGCGTTACGTCAGGCCCAGATGCAGGG...CAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp CCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTGGCGCTCTCCAGGCGTaGGAAGCTGTCGGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: PGQGTANSTGVTVGAGRSGALQA*EAVGEV
Trigger: GACCTCACCGACAGCTTCGCACGCCTGGAGAGCGCC...ACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp ACTCCACCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCTGCTCTGTCAGCGCCTaGAGCACCGAGGCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: TPPSWPGDGKQHRSHSGGCSVSA*STEAWA
Trigger: CGCCCAGGCCTCGGTGCTGCAGGCGCTGACAGAGCA...GCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGGTGGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp GGAGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCGTGTCCAGCAGCTCCTaGTCCTGGTCGCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: GDSHLREGVITPKALLGGVSSSS*SWSPTS
Trigger: GCTGGTGGGCGACCAGGAGCAGGAGCTGCTGGACAC...GCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp CTGCCCCAGGTAGGAGGACGGCCGGGAGCTGGGTGGGGGATGGGTTGGGCCTCAGGGCCAAGGACAAGGTaGACCAGTCTAGCGGTCCTC +
Preference number: 4 (lower is better)
Translates to: LPQVGGRPGAGWGMGWASGPRTR*TSLAVL
Trigger: GAGGACCGCTAGACTGGTGCACCTTGTCCTTGGCCC...TGAGGCCCAACCCATCCCCCACCCAGCTCCCGGCCGTCCTCCTACCTGGGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR GCA 90 bp CCAGGGAGCTTCGTGTCAGGGATGGCCCGGCCCCTCCCTACTGGAGAGTGGGTCTCCAGGGGTGCTGTCTaGCCCCTGCTCTCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: PGSFVSGMARPLPTGEWVSRGAV*PLLSVP
Trigger: GGGGACAGAGAGCAGGGGGCAGACAGCACCCCTGGA...GACCCACTCTCCAGTAGGGAGGGGCCGGGCCATCCCTGACACGAAGCTCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp ACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCCCGCCGTGCCCGGCGCGTaGGCGTGGTTCAGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: TGVTVGAGRSWGRQVCQPAVPGA*AWFRKS
Trigger: GCTCTTCCTGAACCACGCCCACGCGCCGGGCACGGC...GGGCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GTGGGGACGGCGAGAAGGCGATGTGTGACTTCACCGGCCCAGGGAGCTTCGTGTGCCGTGCCCGGCGCGTaGGCGTGGTTCAGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: VGTARRRCVTSPAQGASCAVPGA*AWFRKS
Trigger: GCTCTTCCTGAACCACGCCCACGCGCCGGGCACGGC...ACACGAAGCTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCGCCGTCCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GGGACGGCGAGAAGGCGATGTGTGACTTCACCGGCCCAGGGAGCTTCGTGTCAGGCCGTGCCCGGCGCGTaGGCGTGGTTCAGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: GTARRRCVTSPAQGASCQAVPGA*AWFRKS
Trigger: GCTCTTCCTGAACCACGCCCACGCGCCGGGCACGGC...CTGACACGAAGCTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCGCCGTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp ACCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCACCCACCAGCCGTGGCTaGGCCTGGTGCTCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: TILARGRQTAPESQWGQAPTSRG*AWCSVS
Trigger: GCTGACAGAGCACCAGGCCCAGCCACGGCTGGTGGG...TGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GGCCTCCAGGGAACTGGTCTCAGCCTTGGAGCGTGGGTCCCCAAAGGCAGCAGCCCCACCAGCCGTGGCTaGGCCTGGTGCTCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: GLQGTGLSLGAWVPKGSSPTSRG*AWCSVS
Trigger: GCTGACAGAGCACCAGGCCCAGCCACGGCTGGTGGG...GCTGCTGCCTTTGGGGACCCACGCTCCAAGGCTGAGACCAGTTCCCTGGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp ACTCCACCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGCAGCTCCTGCTCCTaGTCGCCCACCAGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: TPPSWPGDGKQHRSHSGGSSSCS*SPTSRG
Trigger: GCCACGGCTGGTGGGCGACCAGGAGCAGGAGCTGCT...GCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGGTGGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp AGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCCTAGGTGGGGTCGGGGATaGGGCGACAGGGACCAGCAG +
Preference number: 4 (lower is better)
Translates to: RQPPQGRGHHPQGPPGRPRWGRG*GDRDQQ
Trigger: CTGCTGGTCCCTGTCGCCCCATCCCCGACCCCACCT...AGGCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CCTGCTCTCTGTCCCCATAATGCCGGGTATTTGGCCGGGCAGGGCAGAGGGTGCCCGGCCCCTCCCTACTaGAGAGTGGGTCCGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PALCPHNAGYLAGQGRGCPAPPY*RVGPPG
Trigger: GCCTGGCGGACCCACTCTCCAGTAGGGAGGGGCCGG...GCACCCTCTGCCCTGCCCGGCCAAATACCCGGCATTATGGGGACAGAGAGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CTGCCCCAGGTAGGAGGACGGCCGGGAGCTGGGTGGGGGATGGGTTGGGCCTCACAGACTCCACCATCCTaGCCAGGGGACGGCAAACAG +
Preference number: 4 (lower is better)
Translates to: LPQVGGRPGAGWGMGWASQTPPS*PGDGKQ
Trigger: CTGTTTGCCGTCCCCTGGCCAGGATGGTGGAGTCTG...TGAGGCCCAACCCATCCCCCACCCAGCTCCCGGCCGTCCTCCTACCTGGGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GGCCTCCAGGGAACTGGTCTCAGCCTTGGAGCGTGGGTCCCCAAAGGCAGCAGCCAGGGCCTGGTAGGATaGGGCCACCCAGCCCACAGC +
Preference number: 4 (lower is better)
Translates to: GLQGTGLSLGAWVPKGSSQGLVG*GHPAHS
Trigger: GCTGTGGGCTGGGTGGCCCCATCCTACCAGGCCCTG...GCTGCTGCCTTTGGGGACCCACGCTCCAAGGCTGAGACCAGTTCCCTGGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GGCCTCCAGGGAACTGGTCTCAGCCTTGGAGCGTGGGTCCCCAAAGGCAGCAGCTGCCGGGGCACAGGGTaGGTGGCCTCCAGGGAACTG +
Preference number: 4 (lower is better)
Translates to: GLQGTGLSLGAWVPKGSSCRGTG*VASREL
Trigger: CAGTTCCCTGGAGGCCACCCACCCTGTGCCCCGGCA...GCTGCTGCCTTTGGGGACCCACGCTCCAAGGCTGAGACCAGTTCCCTGGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GGAACCCCACACCCCCTAGGCACCTGCCATCGGGTGTCCTTTGGAGGAAGCCACAGGACGGCCGGGAGCTaGGTGGGGGATGGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: GTPHPLGTCHRVSFGGSHRTAGS*VGDGLG
Trigger: GCCCAACCCATCCCCCACCCAGCTCCCGGCCGTCCT...GTGGCTTCCTCCAAAGGACACCCGATGGCAGGTGCCTAGGGGGTGTGGGGTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GGCCCAGGGAGCTTCGTGTCAGGGATGGCCCGGCCCCTCCCTACTGGAGAGTGGGCAGGAGAAATGGGATaGCAGCCCCAGCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: GPGSFVSGMARPLPTGEWAGEMG*QPQLPQ
Trigger: CTGGGGCAGCTGGGGCTGCCATCCCATTTCTCCTGC...CCACTCTCCAGTAGGGAGGGGCCGGGCCATCCCTGACACGAAGCTCCCTGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp GGCCCAGGGAGCTTCGTGTCAGGGATGGCCCGGCCCCTCCCTACTGGAGAGTGGTGGCCTGGGTCCAGGTaGCCACGGTCAATGGCAAGG +
Preference number: 4 (lower is better)
Translates to: GPGSFVSGMARPLPTGEWWPGSR*PRSMAR
Trigger: CCTTGCCATTGACCGTGGCCACCTGGACCCAGGCCA...CCACTCTCCAGTAGGGAGGGGCCGGGCCATCCCTGACACGAAGCTCCCTGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp GAGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCCTGCCCTTGTGGCTGCTaGTCCTGGGAGCCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: ETATSGKGSSPPRPSWEACPCGC*SWEPAG
Trigger: ACCCGCAGGCTCCCAGGACCAGCAGCCACAAGGGCA...GGCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGCCCTTGTGGCTGCTaGTCCTGGGAGCCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: PGQGTANSTGVTVGAGRSCPCGC*SWEPAG
Trigger: ACCCGCAGGCTCCCAGGACCAGCAGCCACAAGGGCA...ACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp GCCTCATCCCAGCCCTGCCTAGGCCCCAGCCCAGAAAACCAAGAGCTTCCCATTCACTCTGCAGGGCGCTaGGGCCCTGGCCCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: ASSQPCLGPSPENQELPIHSAGR*GPGPAC
Trigger: GCACGCTGGGCCAGGGCCTCAGCGCCCTGCAGAGTG...AATGGGAAGCTCTTGGTTTTCTGGGCTGGGGCCTAGGCAGGGCTGGGATGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp CAGAGGCAAGAGATCAGTGAGCTGCCAAATGGAGGGGGTGGGGACGGCGAGAAGGTGGTCCCTGTCCCTTaGCCACTCGCCGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: QRQEISELPNGGGGDGEKVVPVP*PLAGPG
Trigger: GCCCGGCCCGGCGAGTGGTCAAGGGACAGGGACCAC...CTTCTCGCCGTCCCCACCCCCTCCATTTGGCAGCTCACTGATCTCTTGCCTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp CCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTACCCCATTTGCCCGGTaGGGTGGTCCCTGTCCCTTG +
Preference number: 4 (lower is better)
Translates to: PGQGTANSTGVTVGAGRSTPFAR*GGPCPL
Trigger: CAAGGGACAGGGACCACCTCACCGGGCAAATGGGGT...ACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp GGAGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCACCCCATTTGCCCGGTaGGGTGGTCCCTGTCCCTTG +
Preference number: 4 (lower is better)
Translates to: GDSHLREGVITPKALLGGTPFAR*GGPCPL
Trigger: CAAGGGACAGGGACCACCTCACCGGGCAAATGGGGT...GCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp CGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTCACACAAGTCACCATaGGCGGGGCGGGCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: RQTAPESQWGQAGVGVVKSHKSP*AGRAPR
Trigger: CCTCGGGGCCCGCCCCGCGCATGGTGACTTGTGTGA...CTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000372338.9
CDS-3UTR GCA 90 bp ACTCCACCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCGGCGCTCTCCAGGCGTaGGAAGCTGTCGGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: TPPSWPGDGKQHRSHSGGGALQA*EAVGEV
Trigger: GACCTCACCGACAGCTTCGCACGCCTGGAGAGCGCC...GCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGGTGGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp GCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCTGCTCTGTCAGCGCCTaGAGCACCGAGGCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: APESQWGQAGVGVVKFASCSVSA*STEAWA
Trigger: CGCCCAGGCCTCGGTGCTGCAGGCGCTGACAGAGCA...GCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp ACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCCCCGTGGCTGGGCCTGGTaGTCTGTCAGCGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TGVTVGAGRSWGRQVCQPRGWAW*SVSACS
Trigger: GCTGCAGGCGCTGACAGAGCACCAGGCCCAGCCACG...GGGCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp AGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCCTGTGTCCAGCAGCTCCTaGTCCTGGTCGCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: RQPPQGRGHHPQGPPGRPVSSSS*SWSPTS
Trigger: GCTGGTGGGCGACCAGGAGCAGGAGCTGCTGGACAC...AGGCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp ACTCCACCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCCCCATGCACTCCGTCTaGAGCTCTGAGGCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: TPPSWPGDGKQHRSHSGGPMHSV*SSEARA
Trigger: GGCCCGAGCCTCAGAGCTGCAGACGGAGTGCATGGG...GCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGGTGGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp CCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTCCTTCCGCAGCCCCATaGACTCCGTCTGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: PGQGTANSTGVTVGAGRSPSAAP*TPSAAL
Trigger: CAGAGCTGCAGACGGAGTGCATGGGGCTGCGGAAGG...ACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp GGCCTCCAGGGAACTGGTCTCAGCCTTGGAGCGTGGGTCCCCAAAGGCAGCAGCAGCCCCCGGTCCCTCTaGAGGGCATCCAGGATGTCG +
Preference number: 4 (lower is better)
Translates to: GLQGTGLSLGAWVPKGSSSPRSL*RASRMS
Trigger: CGACATCCTGGATGCCCTGCAGAGGGACCGGGGGCT...GCTGCTGCCTTTGGGGACCCACGCTCCAAGGCTGAGACCAGTTCCCTGGAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp ACCGGCCCAGGGAGCTTCGTGTCAGGGATGGCCCGGCCCCTCCCTACTGGAGAGGGGCCAAGGACAAGGTaGACCAGTCTAGCGGTCCTC +
Preference number: 4 (lower is better)
Translates to: TGPGSFVSGMARPLPTGEGPRTR*TSLAVL
Trigger: GAGGACCGCTAGACTGGTGCACCTTGTCCTTGGCCC...CTCTCCAGTAGGGAGGGGCCGGGCCATCCCTGACACGAAGCTCCCTGGGCCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR GCA 90 bp ACCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGGACTCCAGGGGTaGTGTCTGCCCCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: TILARGRQTAPESQWGQAGGLQG*CLPPAL
Trigger: GAGAGCAGGGGGCAGACAGCACCCCTGGAGTCCTCC...TGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp CACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCCAGTCCAGCCCCACGGTaGAGGGCCCCACCCACCTTC +
Preference number: 4 (lower is better)
Translates to: HRSHSGGRQELGSSSLPASPAPR*RAPPTF
Trigger: GAAGGTGGGTGGGGCCCTGCACCGTGGGGCTGGACT...GGCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp GCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCAGTCCAGCCCCACGGTaGAGGGCCCCACCCACCTTC +
Preference number: 4 (lower is better)
Translates to: APESQWGQAGVGVVKFASSPAPR*RAPPTF
Trigger: GAAGGTGGGTGGGGCCCTGCACCGTGGGGCTGGACT...GCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp CTGCCCCAGGTAGGAGGACGGCCGGGAGCTGGGTGGGGGATGGGTTGGGCCTCAGTGGGGATGACAGCGTaGTGGGTGTTGGGAGGATTC +
Preference number: 4 (lower is better)
Translates to: LPQVGGRPGAGWGMGWASVGMTA*WVLGGF
Trigger: GAATCCTCCCAACACCCAGCACGCTGTCATCCCCAC...TGAGGCCCAACCCATCCCCCACCCAGCTCCCGGCCGTCCTCCTACCTGGGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp GGGACGGCGAGAAGGCGATGTGTGACTTCACCGGCCCAGGGAGCTTCGTGTCAGCCCTGCCCTTGTGGCTaGTGGTCCTGGGAGCCTGCG +
Preference number: 4 (lower is better)
Translates to: GTARRRCVTSPAQGASCQPCPCG*WSWEPA
Trigger: CGCAGGCTCCCAGGACCAGCAGCCACAAGGGCAGGG...CTGACACGAAGCTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCGCCGTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp AACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCAGTGCTGACGACAGGTaGGGGCGCCGTGCCCGGCGC +
Preference number: 4 (lower is better)
Translates to: NSTGVTVGAGRSWGRQVCSADDR*GRRARR
Trigger: GCGCCGGGCACGGCGCCCCCACCTGTCGTCAGCACT...GCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CAGAGGCAAGAGATCAGTGAGCTGCCAAATGGAGGGGGTGGGGACGGCGAGAAGAGTGCTGACGACAGGTaGGGGCGCCGTGCCCGGCGC +
Preference number: 4 (lower is better)
Translates to: QRQEISELPNGGGGDGEKSADDR*GRRARR
Trigger: GCGCCGGGCACGGCGCCCCCACCTGTCGTCAGCACT...CTTCTCGCCGTCCCCACCCCCTCCATTTGGCAGCTCACTGATCTCTTGCCTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GTGGGGACGGCGAGAAGGCGATGTGTGACTTCACCGGCCCAGGGAGCTTCGTGTCCCACCAGCCGTGGCTaGGCCTGGTGCTCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: VGTARRRCVTSPAQGASCPTSRG*AWCSVS
Trigger: GCTGACAGAGCACCAGGCCCAGCCACGGCTGGTGGG...ACACGAAGCTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCGCCGTCCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGGTCGCCCACCAGCCGTaGCTGGGCCTGGTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: RQTAPESQWGQAGVGVVKVAHQP*LGLVLC
Trigger: ACAGAGCACCAGGCCCAGCCACGGCTGGTGGGCGAC...CTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCAGCAGCTCCTGCTCCTaGTCGCCCACCAGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: APESQWGQAGVGVVKFASSSSCS*SPTSRG
Trigger: GCCACGGCTGGTGGGCGACCAGGAGCAGGAGCTGCT...GCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CAGAGGCAAGAGATCAGTGAGCTGCCAAATGGAGGGGGTGGGGACGGCGAGAAGAGGGCGCTGAGGCCCTaGCCCAGCGTGCCATGCCCC +
Preference number: 4 (lower is better)
Translates to: QRQEISELPNGGGGDGEKRALRP*PSVPCP
Trigger: GGGGCATGGCACGCTGGGCCAGGGCCTCAGCGCCCT...CTTCTCGCCGTCCCCACCCCCTCCATTTGGCAGCTCACTGATCTCTTGCCTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CACCGGCCCAGGGAGCTTCGTGTCAGGGATGGCCCGGCCCCTCCCTACTGGAGACGTAGGCAGCCTGTGTaGTCAGGGCGTGGATCCTCT +
Preference number: 4 (lower is better)
Translates to: HRPRELRVRDGPAPPYWRRRQPV*SGRGSS
Trigger: AGAGGATCCACGCCCTGACCACACAGGCTGCCTACG...TCTCCAGTAGGGAGGGGCCGGGCCATCCCTGACACGAAGCTCCCTGGGCCGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp CTGCCCCAGGTAGGAGGACGGCCGGGAGCTGGGTGGGGGATGGGTTGGGCCTCATGGCATTGGGAGGGCTaGAGGATACTGGCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: LPQVGGRPGAGWGMGWASWHWEG*RILASD
Trigger: GTCTGAGGCCAGTATCCTCCAGCCCTCCCAATGCCA...TGAGGCCCAACCCATCCCCCACCCAGCTCCCGGCCGTCCTCCTACCTGGGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTACCAGGGAAACGGGGTaGGGGTTGGCATTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: PGQGTANSTGVTVGAGRSTRETG*GLALGG
Trigger: CCCTCCCAATGCCAACCCCCACCCCGTTTCCCTGGT...ACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp GGGTCCGCCAGGCACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTGGGGTGTGCGAAGCTGTCGGTaGGGTCGGGGCAGCGCGGGT +
Preference number: 4 (lower is better)
Translates to: GSARHRWVENIHERVRWGVRSCR*GRGSAG
Trigger: ACCCGCGCTGCCCCGACCTCACCGACAGCTTCGCAC...ACCCCACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR TCA 90 bp GGAGTCCCTGGGAAATTGGTGGTGGGGGTTGTACAAGCCTCATCCCAGCCCTGCGTGCGAAGCTGTCGGTaGGGTCGGGGCAGCGCGGGT +
Preference number: 4 (lower is better)
Translates to: GVPGKLVVGVVQASSQPCVRSCR*GRGSAG
Trigger: ACCCGCGCTGCCCCGACCTCACCGACAGCTTCGCAC...GCAGGGCTGGGATGAGGCTTGTACAACCCCCACCACCAATTTCCCAGGGACTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp CCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTCACGGTCCTTGGTGGTaGACCTCATGCCGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: PGQGTANSTGVTVGAGRSHGPWW*TSCRCA
Trigger: AGCACAGCGGCATGAGGTTCACCACCAAGGACCGTG...ACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR TCA 90 bp TGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGCGAGAAGGCGATGTGTaGCTTCACCGGCCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: WPGDGKQHRSHSGGRQELREGDV*LHRPRE
Trigger: CTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCG...CAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp GAGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCCCACAAGGAGTGGGGATaGCAGCGTGCTGGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: ETATSGKGSSPPRPSWEAHKEWG*QRAGCW
Trigger: CCAACACCCAGCACGCTGTCATCCCCACTCCTTGTG...GGCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp ACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCCCCCCATGCACTCCGTCTaGAGCTCTGAGGCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: TGVTVGAGRSWGRQVCQPPMHSV*SSEARA
Trigger: GGCCCGAGCCTCAGAGCTGCAGACGGAGTGCATGGG...GGGCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp GGGACGGCGAGAAGGCGATGTGTGACTTCACCGGCCCAGGGAGCTTCGTGTCAGAGCCCCCGGTCCCTCTaGAGGGCATCCAGGATGTCG +
Preference number: 4 (lower is better)
Translates to: GTARRRCVTSPAQGASCQSPRSL*RASRMS
Trigger: CGACATCCTGGATGCCCTGCAGAGGGACCGGGGGCT...CTGACACGAAGCTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCGCCGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp ACCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCATTGAGCCCTAGCCAGTaGTCCCCGGTGAGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: TILARGRQTAPESQWGQALSPSQ*SPVSLP
Trigger: TGGCAGGCTCACCGGGGAGCACTGGCTAGGGCTCAA...TGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR GCA 90 bp CTGCCCCAGGTAGGAGGACGGCCGGGAGCTGGGTGGGGGATGGGTTGGGCCTCAAACTTGAGTGAGTACTaGCAGCCGGTCCAGGAGGAC +
Preference number: 4 (lower is better)
Translates to: LPQVGGRPGAGWGMGWASNLSEY*QPVQED
Trigger: GTCCTCCTGGACCGGCTGGCAGTACTCACTCAAGTT...TGAGGCCCAACCCATCCCCCACCCAGCTCCCGGCCGTCCTCCTACCTGGGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR GCA 90 bp CCTGCTCTCTGTCCCCATAATGCCGGGTATTTGGCCGGGCAGGGCAGAGGGTGCTCCAGGGGTGCTGTCTaGCCCCTGCTCTCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: PALCPHNAGYLAGQGRGCSRGAV*PLLSVP
Trigger: GGGGACAGAGAGCAGGGGGCAGACAGCACCCCTGGA...GCACCCTCTGCCCTGCCCGGCCAAATACCCGGCATTATGGGGACAGAGAGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp ACCGGCCCAGGGAGCTTCGTGTCAGGGATGGCCCGGCCCCTCCCTACTGGAGAGAAAGTGTCCAGGTGGTaGCTGGTCTGGTGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: TGPGSFVSGMARPLPTGEKVSRW*LVWCPS
Trigger: ACTGGGGCACCAGACCAGGCACCACCTGGACACTTT...CTCTCCAGTAGGGAGGGGCCGGGCCATCCCTGACACGAAGCTCCCTGGGCCGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR GCA 90 bp ACTCCACCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCCTGGTCCTGGGAGCCTaGGGGTCTCACCTCTGCATG +
Preference number: 4 (lower is better)
Translates to: TPPSWPGDGKQHRSHSGGLVLGA*GSHLCM
Trigger: CATGCAGAGGTGAGACCCGCAGGCTCCCAGGACCAG...GCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGGTGGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GCTGGGTGGGGGATGGGTTGGGCCTCATTTGAGACAGAGAGCAGGTGGGCACAGCCCGGCGCGTGGGCGTaGTTCAGGAAGAGCACGGCA +
Preference number: 4 (lower is better)
Translates to: AGWGMGWASFETESRWAQPGAWA*FRKSTA
Trigger: TGCCGTGCTCTTCCTGAACCACGCCCACGCGCCGGG...CTGTGCCCACCTGCTCTCTGTCTCAAATGAGGCCCAACCCATCCCCCACCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GAGTGGGTCCGCCAGGCACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTGAGTGCTGACGACAGGTaGGGGCGCCGTGCCCGGCGC +
Preference number: 4 (lower is better)
Translates to: EWVRQAQVGGEHSRKSEVSADDR*GRRARR
Trigger: GCGCCGGGCACGGCGCCCCCACCTGTCGTCAGCACT...CACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGACCCACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp CCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGCGGCCGGGTAGTGGGTaGGAAAGACAGAGTAGACGC +
Preference number: 4 (lower is better)
Translates to: PSWPGDGKQHRSHSGGRQRPGSG*ERQSRR
Trigger: GCGTCTACTCTGTCTTTCCCACCCACTACCCGGCCG...CTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp ACTCCACCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCCACGAAAGAGTGAGGTaGGGTCGGGGATGGGGCGAC +
Preference number: 4 (lower is better)
Translates to: TPPSWPGDGKQHRSHSGGHERVR*GRGWGD
Trigger: GTCGCCCCATCCCCGACCCCACCTCACTCTTTCGTG...GCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGGTGGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GACTCCACCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCTCCCTACTGGAGAGTaGGTCCGCCAGGCACAGGTG +
Preference number: 4 (lower is better)
Translates to: DSTILARGRQTAPESQWGLPTGE*VRQAQV
Trigger: CACCTGTGCCTGGCGGACCCACTCTCCAGTAGGGAG...CCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGGTGGAGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GCCTCATCCCAGCCCTGCCTAGGCCCCAGCCCAGAAAACCAAGAGCTTCCCATTCCGGCCCCTCCCTACTaGAGAGTGGGTCCGCCAGGC +
Preference number: 4 (lower is better)
Translates to: ASSQPCLGPSPENQELPIPAPPY*RVGPPG
Trigger: GCCTGGCGGACCCACTCTCCAGTAGGGAGGGGCCGG...AATGGGAAGCTCTTGGTTTTCTGGGCTGGGGCCTAGGCAGGGCTGGGATGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CCAGGGAGCTTCGTGTCAGGGATGGCCCGGCCCCTCCCTACTGGAGAGTGGGTCGGGGCAGGCAGGAGTTaGGGTCGTCAAGTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: PGSFVSGMARPLPTGEWVGAGRS*GRQVCQ
Trigger: CTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCC...GACCCACTCTCCAGTAGGGAGGGGCCGGGCCATCCCTGACACGAAGCTCCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp TGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGAGGGCAGAGGGTGCCTaGGGCAGACTCCACCATCCT +
Preference number: 4 (lower is better)
Translates to: WPGDGKQHRSHSGGRQELRAEGA*GRLHHP
Trigger: AGGATGGTGGAGTCTGCCCCAGGCACCCTCTGCCCT...CAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp ACTCCACCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGGCAGAGGGTGCCTaGGGCAGACTCCACCATCCT +
Preference number: 4 (lower is better)
Translates to: TPPSWPGDGKQHRSHSGGRAEGA*GRLHHP
Trigger: AGGATGGTGGAGTCTGCCCCAGGCACCCTCTGCCCT...GCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGGTGGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GACTCCACCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGAGGGCAGAGGGTGCCTaGGGCAGACTCCACCATCCT +
Preference number: 4 (lower is better)
Translates to: DSTILARGRQTAPESQWGRAEGA*GRLHHP
Trigger: AGGATGGTGGAGTCTGCCCCAGGCACCCTCTGCCCT...CCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGGTGGAGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GGAACCCCACACCCCCTAGGCACCTGCCATCGGGTGTCCTTTGGAGGAAGCCACCCCTTGGGGGAGAGGTaGGTTCTCTGGGCACCAGGG +
Preference number: 4 (lower is better)
Translates to: GTPHPLGTCHRVSFGGSHPLGER*VLWAPG
Trigger: CCCTGGTGCCCAGAGAACCCACCTCTCCCCCAAGGG...GTGGCTTCCTCCAAAGGACACCCGATGGCAGGTGCCTAGGGGGTGTGGGGTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp ACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCCCGGGGCACAGGGTGGGTaGCCTCCAGGGAACTGGTCT +
Preference number: 4 (lower is better)
Translates to: TGVTVGAGRSWGRQVCQPGAQGG*PPGNWS
Trigger: AGACCAGTTCCCTGGAGGCCACCCACCCTGTGCCCC...GGGCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGGGGGCACAGGGTGGGTaGCCTCCAGGGAACTGGTCT +
Preference number: 4 (lower is better)
Translates to: RQTAPESQWGQAGVGVVKGAQGG*PPGNWS
Trigger: AGACCAGTTCCCTGGAGGCCACCCACCCTGTGCCCC...CTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GGCCCAGGGAGCTTCGTGTCAGGGATGGCCCGGCCCCTCCCTACTGGAGAGTGGCGCATGTGGATGACCTaGTGGCACTGGGACAGAGAG +
Preference number: 4 (lower is better)
Translates to: GPGSFVSGMARPLPTGEWRMWMT*WHWDRE
Trigger: CTCTCTGTCCCAGTGCCACCAGGTCATCCACATGCG...CCACTCTCCAGTAGGGAGGGGCCGGGCCATCCCTGACACGAAGCTCCCTGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
3UTR CAA 72 bp ACAGGGTGGGTGGCCTCCAGGGAACTGGTCTCAGCCTaGGAGCGTGGGTCCCCAAAGGCAGCAGCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: TGWVASRELVSA*ERGSPKAAAPH
Trigger: ATGGGGAGCTGCTGCCTTTGGGGACCCACGCTCCAAGGCTGAGACCAGTTCCCTGGAGGCCACCCACCCTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp CCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGTCTTCCACCGGTCGTTaGCCATCTTCCGGCAGGACT +
Preference number: 4 (lower is better)
Translates to: PSWPGDGKQHRSHSGGRQSSTGR*PSSGRT
Trigger: AGTCCTGCCGGAAGATGGTCAACGACCGGTGGAAGA...CTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR TCA 90 bp GCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCAGAGCACGGCACCGGTaGCAGCTACAGCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: APESQWGQAGVGVVKFASRARHR*QLQPAA
Trigger: TGCTGCTGGCTGTAGCTGTCACCGGTGCCGTGCTCT...GCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR TCA 90 bp GTGGGGACGGCGAGAAGGCGATGTGTGACTTCACCGGCCCAGGGAGCTTCGTGTAGAGCACGGCACCGGTaGCAGCTACAGCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: VGTARRRCVTSPAQGASCRARHR*QLQPAA
Trigger: TGCTGCTGGCTGTAGCTGTCACCGGTGCCGTGCTCT...ACACGAAGCTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCGCCGTCCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR TCA 90 bp AACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCCGCCCTTTCCACAGTaGCCAGGGCGCTGTTGGCGC +
Preference number: 4 (lower is better)
Translates to: NSTGVTVGAGRSWGRQVCPPFPQ*PGRCWR
Trigger: GCGCCAACAGCGCCCTGGTCACTGTGGAAAGGGCGG...GCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp ACTCCACCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCCAGAGAGAAGCTGGATaGGGCGGCCCTGCTCACTCT +
Preference number: 4 (lower is better)
Translates to: TPPSWPGDGKQHRSHSGGQREAG*GGPAHS
Trigger: AGAGTGAGCAGGGCCGCCTCATCCAGCTTCTCTCTG...GCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGGTGGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp ACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCCCACGGAGTTCACCAGGTaGGCCATGTGGCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: TGVTVGAGRSWGRQVCQPTEFTR*AMWPWL
Trigger: GAGCCAGGGCCACATGGCTCACCTGGTGAACTCCGT...GGGCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp CCAGGGAGCTTCGTGTCAGGGATGGCCCGGCCCCTCCCTACTGGAGAGTGGGTCCATCCAGGATGTCGCTaGCGGAGTTCACCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: PGSFVSGMARPLPTGEWVHPGCR*RSSPGE
Trigger: CTCACCTGGTGAACTCCGTCAGCGACATCCTGGATG...GACCCACTCTCCAGTAGGGAGGGGCCGGGCCATCCCTGACACGAAGCTCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR TCA 90 bp CAGAGGCAAGAGATCAGTGAGCTGCCAAATGGAGGGGGTGGGGACGGCGAGAAGCGGGCAGGCGCTCTCTaGAGGTCGGCCTTGTTGCGG +
Preference number: 4 (lower is better)
Translates to: QRQEISELPNGGGGDGEKRAGAL*RSALLR
Trigger: CCGCAACAAGGCCGACCTTCAGAGAGCGCCTGCCCG...CTTCTCGCCGTCCCCACCCCCTCCATTTGGCAGCTCACTGATCTCTTGCCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp CTGCGGGTCTCACCTCTGCATGTGTGCACACAAGGAGTGGGGATGACAGCGTGCCGGGCAGGCGCTCTCTaGAGGTCGGCCTTGTTGCGG +
Preference number: 4 (lower is better)
Translates to: LRVSPLHVCTQGVGMTACRAGAL*RSALLR
Trigger: CCGCAACAAGGCCGACCTTCAGAGAGCGCCTGCCCG...GCACGCTGTCATCCCCACTCCTTGTGTGCACACATGCAGAGGTGAGACCCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp GGAGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCAATAGTCAGCCACGGTaGGCGGGTACCCGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GDSHLREGVITPKALLGGNSQPR*AGTRLP
Trigger: AGGAAGACGGGTACCCGCTCACCGTGGCTGACTATT...GCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR TCA 90 bp ACTCCACCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCCACGGTCCTTGGTGGTaGACCTCATGCCGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: TPPSWPGDGKQHRSHSGGHGPWW*TSCRCA
Trigger: AGCACAGCGGCATGAGGTTCACCACCAAGGACCGTG...GCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGGTGGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR TCA 90 bp GGAGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCGCAGGTACTGCCCATTaGGGTTGGACGTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: GDSHLREGVITPKALLGGAGTAH*GWTCGS
Trigger: ACTGCCACACGTCCAACCTCAATGGGCAGTACCTGC...GCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR TCA 90 bp GGGACGGCGAGAAGGCGATGTGTGACTTCACCGGCCCAGGGAGCTTCGTGTCAGCGAGAAGGCGATGTGTaGCTTCACCGGCCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GTARRRCVTSPAQGASCQREGDV*LHRPRE
Trigger: CTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCG...CTGACACGAAGCTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCGCCGTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp GGAGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCGACCTCAGAGAGACCTaGCGTTCCCCACGATCTGCT +
Preference number: 4 (lower is better)
Translates to: GDSHLREGVITPKALLGGDLRET*RSPRSA
Trigger: AGCAGATCGTGGGGAACGTCAGGTCTCTCTGAGGTC...GCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp ACTCCACCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCGGGTTGGGCCTCATTTaGGACAGAGAGCAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: TPPSWPGDGKQHRSHSGGGLGLI*DREQVG
Trigger: GCCCACCTGCTCTCTGTCTCAAATGAGGCCCAACCC...GCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGGTGGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp AACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCGGGCCAGCAGCACGGTaGACAGCACGTAGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: NSTGVTVGAGRSWGRQVCGPAAR*TARSRS
Trigger: GCTGCGGCTACGTGCTGTGCACCGTGCTGCTGGCCC...GCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR GCA 90 bp GGCGAGAAGGCGATGTGTGACTTCACCGGCCCAGGGAGCTTCGTGTCAGGGATGGGCGCTCTCCAGGCGTaGGAAGCTGTCGGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: GEKAMCDFTGPGSFVSGMGALQA*EAVGEV
Trigger: GACCTCACCGACAGCTTCGCACGCCTGGAGAGCGCC...CATCCCTGACACGAAGCTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp GGGACGGCGAGAAGGCGATGTGTGACTTCACCGGCCCAGGGAGCTTCGTGTCAGCCTTCCGCAGCCCCATaGACTCCGTCTGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: GTARRRCVTSPAQGASCQPSAAP*TPSAAL
Trigger: CAGAGCTGCAGACGGAGTGCATGGGGCTGCGGAAGG...CTGACACGAAGCTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCGCCGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp GGAACCCCACACCCCCTAGGCACCTGCCATCGGGTGTCCTTTGGAGGAAGCCACTTGAGCCCTAGCCAGTaGTCCCCGGTGAGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: GTPHPLGTCHRVSFGGSHLSPSQ*SPVSLP
Trigger: TGGCAGGCTCACCGGGGAGCACTGGCTAGGGCTCAA...GTGGCTTCCTCCAAAGGACACCCGATGGCAGGTGCCTAGGGGGTGTGGGGTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR GCA 90 bp GAGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCCAACCTCATGCCGCTGTaGTTCAGGAGGGAGTCGCCT +
Preference number: 4 (lower is better)
Translates to: ETATSGKGSSPPRPSWEANLMPL*FRRESP
Trigger: AGGCGACTCCCTCCTGAAGCACAGCGGCATGAGGTT...GGCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR GCA 90 bp AGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCCTGCACCGCGCAGGTACTaGCCATTGAGGTTGGACGTG +
Preference number: 4 (lower is better)
Translates to: RQPPQGRGHHPQGPPGRPAPRRY*PLRLDV
Trigger: CACGTCCAACCTCAATGGGCAGTACCTGCGCGGTGC...AGGCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR GCA 90 bp CCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTaGCAGCCCCCATCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: PGQGTANSTGVTVGAGRSWGRQV*QPPSAE
Trigger: CTCTGCTGATGGGGGCTGGCAAACTTGACGACCCCA...ACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp CACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCCCTGGTCCTGGGAGCCTaGGGGTCTCACCTCTGCATG +
Preference number: 4 (lower is better)
Translates to: HRSHSGGRQELGSSSLPALVLGA*GSHLCM
Trigger: CATGCAGAGGTGAGACCCGCAGGCTCCCAGGACCAG...GGCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GGGTCCGCCAGGCACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTGGGGTCCCGGCGCGTGGGCGTaGTTCAGGAAGAGCACGGCA +
Preference number: 4 (lower is better)
Translates to: GSARHRWVENIHERVRWGPGAWA*FRKSTA
Trigger: TGCCGTGCTCTTCCTGAACCACGCCCACGCGCCGGG...ACCCCACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp GAGTGGGTCCGCCAGGCACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTGTGCAGCACCGAGGCCTaGGCGCTCTCCAGGCGTGCG +
Preference number: 4 (lower is better)
Translates to: EWVRQAQVGGEHSRKSEVCSTEA*ALSRRA
Trigger: CGCACGCCTGGAGAGCGCCCAGGCCTCGGTGCTGCA...CACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGACCCACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp GGAGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCCTCTCAGAGAGAAGCTaGATGAGGCGGCCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GDSHLREGVITPKALLGGLSERS*MRRPCS
Trigger: TGAGCAGGGCCGCCTCATCCAGCTTCTCTCTGAGAG...GCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CCAGGGAGCTTCGTGTCAGGGATGGCCCGGCCCCTCCCTACTGGAGAGTGGGTCTGTGTGGTCAGGGCGTaGATCCTCTTGAGCCCTAGC +
Preference number: 4 (lower is better)
Translates to: PGSFVSGMARPLPTGEWVCVVRA*ILLSPS
Trigger: GCTAGGGCTCAAGAGGATCCACGCCCTGACCACACA...GACCCACTCTCCAGTAGGGAGGGGCCGGGCCATCCCTGACACGAAGCTCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp GGCCCAGGGAGCTTCGTGTCAGGGATGGCCCGGCCCCTCCCTACTGGAGAGTGGTTGAGGTTGGACGTGTaGCAGTTGCGGTACCACCAG +
Preference number: 4 (lower is better)
Translates to: GPGSFVSGMARPLPTGEWLRLDV*QLRYHQ
Trigger: CTGGTGGTACCGCAACTGCCACACGTCCAACCTCAA...CCACTCTCCAGTAGGGAGGGGCCGGGCCATCCCTGACACGAAGCTCCCTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp GTCCGCCAGGCACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTGGGGTCGAGGTGGGGTCGGGGATaGGGCGACAGGGACCAGCAG +
Preference number: 4 (lower is better)
Translates to: VRQAQVGGEHSRKSEVGSRWGRG*GDRDQQ
Trigger: CTGCTGGTCCCTGTCGCCCCATCCCCGACCCCACCT...CGACCCCACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp GGAGTCCCTGGGAAATTGGTGGTGGGGGTTGTACAAGCCTCATCCCAGCCCTGCAGGTGGGGTCGGGGATaGGGCGACAGGGACCAGCAG +
Preference number: 4 (lower is better)
Translates to: GVPGKLVVGVVQASSQPCRWGRG*GDRDQQ
Trigger: CTGCTGGTCCCTGTCGCCCCATCCCCGACCCCACCT...GCAGGGCTGGGATGAGGCTTGTACAACCCCCACCACCAATTTCCCAGGGACTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GGGACGGCGAGAAGGCGATGTGTGACTTCACCGGCCCAGGGAGCTTCGTGTCAGCTCCCTACTGGAGAGTaGGTCCGCCAGGCACAGGTG +
Preference number: 4 (lower is better)
Translates to: GTARRRCVTSPAQGASCQLPTGE*VRQAQV
Trigger: CACCTGTGCCTGGCGGACCCACTCTCCAGTAGGGAG...CTGACACGAAGCTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCGCCGTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp ACCCTGGAGTCCCTGGGAAATTGGTGGTGGGGGTTGTACAAGCCTCATCCCAGCCCGGCCCCTCCCTACTaGAGAGTGGGTCCGCCAGGC +
Preference number: 4 (lower is better)
Translates to: TLESLGNWWWGLYKPHPSPAPPY*RVGPPG
Trigger: GCCTGGCGGACCCACTCTCCAGTAGGGAGGGGCCGG...GCTGGGATGAGGCTTGTACAACCCCCACCACCAATTTCCCAGGGACTCCAGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp AGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCCTGGGGCAGGCAGGAGTTaGGGTCGTCAAGTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: RQPPQGRGHHPQGPPGRPGAGRS*GRQVCQ
Trigger: CTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCC...AGGCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGATAATGCCGGGTATTTaGCCGGGCAGGGCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: PSWPGDGKQHRSHSGGRQIMPGI*PGRAEG
Trigger: ACCCTCTGCCCTGCCCGGCCAAATACCCGGCATTAT...CTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GGAACCCCACACCCCCTAGGCACCTGCCATCGGGTGTCCTTTGGAGGAAGCCACACCAGGGAAACGGGGTaGGGGTTGGCATTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GTPHPLGTCHRVSFGGSHTRETG*GLALGG
Trigger: CCCTCCCAATGCCAACCCCCACCCCGTTTCCCTGGT...GTGGCTTCCTCCAAAGGACACCCGATGGCAGGTGCCTAGGGGGTGTGGGGTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GTCCGCCAGGCACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTGGGGTCGCAGGGCCTGGTAGGATaGGGCCACCCAGCCCACAGC +
Preference number: 4 (lower is better)
Translates to: VRQAQVGGEHSRKSEVGSQGLVG*GHPAHS
Trigger: GCTGTGGGCTGGGTGGCCCCATCCTACCAGGCCCTG...CGACCCCACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp AACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGGGCCTGGTAGGATaGGGCCACCCAGCCCACAGC +
Preference number: 4 (lower is better)
Translates to: NSTGVTVGAGRSWGRQVCQGLVG*GHPAHS
Trigger: GCTGTGGGCTGGGTGGCCCCATCCTACCAGGCCCTG...GCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CAGAGGCAAGAGATCAGTGAGCTGCCAAATGGAGGGGGTGGGGACGGCGAGAAGTGCCGGGGCACAGGGTaGGTGGCCTCCAGGGAACTG +
Preference number: 4 (lower is better)
Translates to: QRQEISELPNGGGGDGEKCRGTG*VASREL
Trigger: CAGTTCCCTGGAGGCCACCCACCCTGTGCCCCGGCA...CTTCTCGCCGTCCCCACCCCCTCCATTTGGCAGCTCACTGATCTCTTGCCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CCAGGGAGCTTCGTGTCAGGGATGGCCCGGCCCCTCCCTACTGGAGAGTGGGTCGAGCTGGGTGGGGGATaGGTTGGGCCTCATTTGAGA +
Preference number: 4 (lower is better)
Translates to: PGSFVSGMARPLPTGEWVELGGG*VGPHLR
Trigger: TCTCAAATGAGGCCCAACCCATCCCCCACCCAGCTC...GACCCACTCTCCAGTAGGGAGGGGCCGGGCCATCCCTGACACGAAGCTCCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp ACCCTGGAGTCCCTGGGAAATTGGTGGTGGGGGTTGTACAAGCCTCATCCCAGCCGGCCGGGAGCTGGGTaGGGGATGGGTTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: TLESLGNWWWGLYKPHPSRPGAG*GMGWAS
Trigger: TGAGGCCCAACCCATCCCCCACCCAGCTCCCGGCCG...GCTGGGATGAGGCTTGTACAACCCCCACCACCAATTTCCCAGGGACTCCAGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTCGGCCGGGAGCTGGGTaGGGGATGGGTTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: QTAPESQWGQAGVGVVKFRPGAG*GMGWAS
Trigger: TGAGGCCCAACCCATCCCCCACCCAGCTCCCGGCCG...AAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GACTCCACCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGAGGCAGGAGAAATaGGATGGCAGCCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: DSTILARGRQTAPESQWGQRQEK*DGSPSC
Trigger: GCAGCTGGGGCTGCCATCCCATTTCTCCTGCCTCTG...CCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGGTGGAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp AGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCCTCAGAGGCAGGAGAAATaGGATGGCAGCCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RQPPQGRGHHPQGPPGRPQRQEK*DGSPSC
Trigger: GCAGCTGGGGCTGCCATCCCATTTCTCCTGCCTCTG...AGGCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CTGCCCCAGGTAGGAGGACGGCCGGGAGCTGGGTGGGGGATGGGTTGGGCCTCATCCCTGGGAAATTGGTaGTGGGGGTTGTACAAGCCT +
Preference number: 4 (lower is better)
Translates to: LPQVGGRPGAGWGMGWASSLGNW*WGLYKP
Trigger: AGGCTTGTACAACCCCCACCACCAATTTCCCAGGGA...TGAGGCCCAACCCATCCCCCACCCAGCTCCCGGCCGTCCTCCTACCTGGGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GGAGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCAAGAAAGTGTCCAGGTaGTGCCTGGTCTGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: GDSHLREGVITPKALLGGKKVSR*CLVWCP
Trigger: GGGGCACCAGACCAGGCACCACCTGGACACTTTCTT...GCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTCCCATCAGGAGGCCTTaGAAAAGCCGCCCTGCATCT +
Preference number: 4 (lower is better)
Translates to: PGQGTANSTGVTVGAGRSPIRRP*KSRPAS
Trigger: AGATGCAGGGCGGCTTTTCCAAGGCCTCCTGATGGG...ACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp CCTGCTCTCTGTCCCCATAATGCCGGGTATTTGGCCGGGCAGGGCAGAGGGTGCCAGAGAGAAGCTGGATaGGGCGGCCCTGCTCACTCT +
Preference number: 4 (lower is better)
Translates to: PALCPHNAGYLAGQGRGCQREAG*GGPAHS
Trigger: AGAGTGAGCAGGGCCGCCTCATCCAGCTTCTCTCTG...GCACCCTCTGCCCTGCCCGGCCAAATACCCGGCATTATGGGGACAGAGAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp ACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCCCCAGAGAGAAGCTGGATaGGGCGGCCCTGCTCACTCT +
Preference number: 4 (lower is better)
Translates to: TGVTVGAGRSWGRQVCQPQREAG*GGPAHS
Trigger: AGAGTGAGCAGGGCCGCCTCATCCAGCTTCTCTCTG...GGGCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp GAACTGGTCTCAGCCTTGGAGCGTGGGTCCCCAAAGGCAGCAGCTCCCCATCCTACGGAGTTCACCAGGTaGGCCATGTGGCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: ELVSALERGSPKAAAPHPTEFTR*AMWPWL
Trigger: GAGCCAGGGCCACATGGCTCACCTGGTGAACTCCGT...AGGATGGGGAGCTGCTGCCTTTGGGGACCCACGCTCCAAGGCTGAGACCAGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp AGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCCTCATCCAGGATGTCGCTaGCGGAGTTCACCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: RQPPQGRGHHPQGPPGRPHPGCR*RSSPGE
Trigger: CTCACCTGGTGAACTCCGTCAGCGACATCCTGGATG...AGGCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp GACCTGACCTCAGAGAGACCTGACGTTCCCCACGATCTGCTAGGAGGACTCCAGCGGGCAGGCGCTCTCTaGAGGTCGGCCTTGTTGCGG +
Preference number: 4 (lower is better)
Translates to: DLTSERPDVPHDLLGGLQRAGAL*RSALLR
Trigger: CCGCAACAAGGCCGACCTTCAGAGAGCGCCTGCCCG...CTGGAGTCCTCCTAGCAGATCGTGGGGAACGTCAGGTCTCTCTGAGGTCAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp AGTGGGTCCGCCAGGCACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTGGGCCAGTGCTCCCCGGTaGGCCTGCCAAAGCCGTCTC +
Preference number: 4 (lower is better)
Translates to: SGSARHRWVENIHERVRWASAPR*ACQSRL
Trigger: GAGACGGCTTTGGCAGGCTCACCGGGGAGCACTGGC...CCACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGACCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR TCA 90 bp GAGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCCGGCACAGTTGTTCTCTaGATGGTCGCTGTCACGGTC +
Preference number: 4 (lower is better)
Translates to: ETATSGKGSSPPRPSWEAGTVVL*MVAVTV
Trigger: GACCGTGACAGCGACCATTCAGAGAACAACTGTGCC...GGCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR TCA 90 bp ACTCCACCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCGCAGGTACTGCCCATTaGGGTTGGACGTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: TPPSWPGDGKQHRSHSGGAGTAH*GWTCGS
Trigger: ACTGCCACACGTCCAACCTCAATGGGCAGTACCTGC...GCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGGTGGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR TCA 90 bp CCAGGGAGCTTCGTGTCAGGGATGGCCCGGCCCCTCCCTACTGGAGAGTGGGTCCTCAGAGAACTTGAGTaGGTACTGCCAGCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: PGSFVSGMARPLPTGEWVLRELE*VLPAGP
Trigger: TGGACCGGCTGGCAGTACTCACTCAAGTTCTCTGAG...GACCCACTCTCCAGTAGGGAGGGGCCGGGCCATCCCTGACACGAAGCTCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR TCA 90 bp ACCGGCCCAGGGAGCTTCGTGTCAGGGATGGCCCGGCCCCTCCCTACTGGAGAGTCATCTCAGAGAACTTaGGTGAGTACTGCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: TGPGSFVSGMARPLPTGESSQRT*VSTASR
Trigger: CCGGCTGGCAGTACTCACTCAAGTTCTCTGAGATGA...CTCTCCAGTAGGGAGGGGCCGGGCCATCCCTGACACGAAGCTCCCTGGGCCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR TCA 90 bp GGCCCAGGGAGCTTCGTGTCAGGGATGGCCCGGCCCCTCCCTACTGGAGAGTGGTCATCTCAGAGAACTTaGGTGAGTACTGCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: GPGSFVSGMARPLPTGEWSSQRT*VSTASR
Trigger: CCGGCTGGCAGTACTCACTCAAGTTCTCTGAGATGA...CCACTCTCCAGTAGGGAGGGGCCGGGCCATCCCTGACACGAAGCTCCCTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR TCA 90 bp GGCCTCCAGGGAACTGGTCTCAGCCTTGGAGCGTGGGTCCCCAAAGGCAGCAGCTACTGGCCTCAGACCTaGCCTCAGAGAGACCTGACG +
Preference number: 4 (lower is better)
Translates to: GLQGTGLSLGAWVPKGSSYWPQT*PQRDLT
Trigger: CGTCAGGTCTCTCTGAGGTCAGGTCTGAGGCCAGTA...GCTGCTGCCTTTGGGGACCCACGCTCCAAGGCTGAGACCAGTTCCCTGGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp ACCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCATACTGGCCTCAGACCTaGCCTCAGAGAGACCTGACG +
Preference number: 4 (lower is better)
Translates to: TILARGRQTAPESQWGQAYWPQT*PQRDLT
Trigger: CGTCAGGTCTCTCTGAGGTCAGGTCTGAGGCCAGTA...TGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp GTGGGGACGGCGAGAAGGCGATGTGTGACTTCACCGGCCCAGGGAGCTTCGTGTGGGTTGGGCCTCATTTaGGACAGAGAGCAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: VGTARRRCVTSPAQGASCGLGLI*DREQVG
Trigger: GCCCACCTGCTCTCTGTCTCAAATGAGGCCCAACCC...ACACGAAGCTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCGCCGTCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp ACCCTGGAGTCCCTGGGAAATTGGTGGTGGGGGTTGTACAAGCCTCATCCCAGCCCCTGCATCTGGGCCTaGCGTAACGCACGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: TLESLGNWWWGLYKPHPSPCIWA*RNARGS
Trigger: GGACCCGCGTGCGTTACGTCAGGCCCAGATGCAGGG...GCTGGGATGAGGCTTGTACAACCCCCACCACCAATTTCCCAGGGACTCCAGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp GAGTCCCTGGGAAATTGGTGGTGGGGGTTGTACAAGCCTCATCCCAGCCCTGCCGGCGCTCTCCAGGCGTaGGAAGCTGTCGGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: ESLGNWWWGLYKPHPSPAGALQA*EAVGEV
Trigger: GACCTCACCGACAGCTTCGCACGCCTGGAGAGCGCC...GGCAGGGCTGGGATGAGGCTTGTACAACCCCCACCACCAATTTCCCAGGGACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp ACCCTGGAGTCCCTGGGAAATTGGTGGTGGGGGTTGTACAAGCCTCATCCCAGCTGCTCTGTCAGCGCCTaGAGCACCGAGGCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: TLESLGNWWWGLYKPHPSCSVSA*STEAWA
Trigger: CGCCCAGGCCTCGGTGCTGCAGGCGCTGACAGAGCA...GCTGGGATGAGGCTTGTACAACCCCCACCACCAATTTCCCAGGGACTCCAGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp GAGTGGGTCCGCCAGGCACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTGCGTGGCTGGGCCTGGTaGTCTGTCAGCGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: EWVRQAQVGGEHSRKSEVRGWAW*SVSACS
Trigger: GCTGCAGGCGCTGACAGAGCACCAGGCCCAGCCACG...CACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGACCCACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR GCA 90 bp GGGTCCGCCAGGCACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTGGGGTGTGTCCAGCAGCTCCTaGTCCTGGTCGCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: GSARHRWVENIHERVRWGVSSSS*SWSPTS
Trigger: GCTGGTGGGCGACCAGGAGCAGGAGCTGCTGGACAC...ACCCCACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR GCA 90 bp CAGAGGCAAGAGATCAGTGAGCTGCCAAATGGAGGGGGTGGGGACGGCGAGAAGGTGTCCAGCAGCTCCTaGTCCTGGTCGCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: QRQEISELPNGGGGDGEKVSSSS*SWSPTS
Trigger: GCTGGTGGGCGACCAGGAGCAGGAGCTGCTGGACAC...CTTCTCGCCGTCCCCACCCCCTCCATTTGGCAGCTCACTGATCTCTTGCCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp GGAGTCCCTGGGAAATTGGTGGTGGGGGTTGTACAAGCCTCATCCCAGCCCTGCCCCATGCACTCCGTCTaGAGCTCTGAGGCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: GVPGKLVVGVVQASSQPCPMHSV*SSEARA
Trigger: GGCCCGAGCCTCAGAGCTGCAGACGGAGTGCATGGG...GCAGGGCTGGGATGAGGCTTGTACAACCCCCACCACCAATTTCCCAGGGACTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp GCTGGGTGGGGGATGGGTTGGGCCTCATTTGAGACAGAGAGCAGGTGGGCACAGCCTTCCGCAGCCCCATaGACTCCGTCTGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: AGWGMGWASFETESRWAQPSAAP*TPSAAL
Trigger: CAGAGCTGCAGACGGAGTGCATGGGGCTGCGGAAGG...CTGTGCCCACCTGCTCTCTGTCTCAAATGAGGCCCAACCCATCCCCCACCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp AACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCAGCCCCCGGTCCCTCTaGAGGGCATCCAGGATGTCG +
Preference number: 4 (lower is better)
Translates to: NSTGVTVGAGRSWGRQVCSPRSL*RASRMS
Trigger: CGACATCCTGGATGCCCTGCAGAGGGACCGGGGGCT...GCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp GGCGAGAAGGCGATGTGTGACTTCACCGGCCCAGGGAGCTTCGTGTCAGGGATGGGGAGTCGCCTGCAGTaGCGGAATAGTCAGCCACGG +
Preference number: 4 (lower is better)
Translates to: GEKAMCDFTGPGSFVSGMGSRLQ*RNSQPR
Trigger: CCGTGGCTGACTATTCCGGCACTGCAGGCGACTCCC...CATCCCTGACACGAAGCTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR GCA 90 bp GGCGAGAAGGCGATGTGTGACTTCACCGGCCCAGGGAGCTTCGTGTCAGGGATGTGGACGTGTGGCAGTTaGGGTACCACCAGGCACCGC +
Preference number: 4 (lower is better)
Translates to: GEKAMCDFTGPGSFVSGMWTCGS*GTTRHR
Trigger: GCGGTGCCTGGTGGTACCGCAACTGCCACACGTCCA...CATCCCTGACACGAAGCTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR GCA 90 bp GGGACGGCGAGAAGGCGATGTGTGACTTCACCGGCCCAGGGAGCTTCGTGTCAGGCACCGCGCAGGTACTaGCCATTGAGGTTGGACGTG +
Preference number: 4 (lower is better)
Translates to: GTARRRCVTSPAQGASCQAPRRY*PLRLDV
Trigger: CACGTCCAACCTCAATGGGCAGTACCTGCGCGGTGC...CTGACACGAAGCTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCGCCGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR GCA 90 bp GGAGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCAAGAGATCAGTGAGCTaGCAAATGGAGGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GDSHLREGVITPKALLGGKRSVS*QMEGVG
Trigger: CCCCACCCCCTCCATTTGGCAGCTCACTGATCTCTT...GCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp GTCCGCCAGGCACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTGGGGTCGGGAGGACTCCAGGGGTaGTGTCTGCCCCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: VRQAQVGGEHSRKSEVGSGGLQG*CLPPAL
Trigger: GAGAGCAGGGGGCAGACAGCACCCCTGGAGTCCTCC...CGACCCCACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR GCA 90 bp GGAACCCCACACCCCCTAGGCACCTGCCATCGGGTGTCCTTTGGAGGAAGCCACCACCCCCTAGGCACCTaGCATCGGGTGTCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: GTPHPLGTCHRVSFGGSHHPLGT*HRVSFG
Trigger: TCCAAAGGACACCCGATGGCAGGTGCCTAGGGGGTG...GTGGCTTCCTCCAAAGGACACCCGATGGCAGGTGCCTAGGGGGTGTGGGGTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp AGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCCTGGGCCAAGGACAAGGTaGACCAGTCTAGCGGTCCTA +
Preference number: 4 (lower is better)
Translates to: RQPPQGRGHHPQGPPGRPGPRTR*TSLAVL
Trigger: TAGGACCGCTAGACTGGTGCACCTTGTCCTTGGCCC...AGGCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444139.5
CDS-3UTR CCA 90 bp GGAGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCTCACACCCGCGGACTTaGATACTAAACTCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: GDSHLREGVITPKALLGGSHPRT*ILNSAS
Trigger: GGAGGCGGAGTTTAGTATCCAAGTCCGCGGGTGTGA...GCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp AGTGGGTCCGCCAGGCACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTGGCCCGGCGCGTGGGCGTaGTTCAGGAAGAGCACGGCA +
Preference number: 4 (lower is better)
Translates to: SGSARHRWVENIHERVRWPGAWA*FRKSTA
Trigger: TGCCGTGCTCTTCCTGAACCACGCCCACGCGCCGGG...CCACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGACCCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp TGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGCTCTCAGAGAGAAGCTaGATGAGGCGGCCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: WPGDGKQHRSHSGGRQELLSERS*MRRPCS
Trigger: TGAGCAGGGCCGCCTCATCCAGCTTCTCTCTGAGAG...CAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCCGGCCGGGTAGTGGGTaGGAAAGACAGAGTAGACGC +
Preference number: 4 (lower is better)
Translates to: APESQWGQAGVGVVKFASRPGSG*ERQSRR
Trigger: GCGTCTACTCTGTCTTTCCCACCCACTACCCGGCCG...GCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp ACCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCATGTGTGGTCAGGGCGTaGATCCTCTTGAGCCCTAGC +
Preference number: 4 (lower is better)
Translates to: TILARGRQTAPESQWGQACVVRA*ILLSPS
Trigger: GCTAGGGCTCAAGAGGATCCACGCCCTGACCACACA...TGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp AGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCCTTGTGTGGTCAGGGCGTaGATCCTCTTGAGCCCTAGC +
Preference number: 4 (lower is better)
Translates to: RQPPQGRGHHPQGPPGRPCVVRA*ILLSPS
Trigger: GCTAGGGCTCAAGAGGATCCACGCCCTGACCACACA...AGGCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp ACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCCCCGTAGGCAGCCTGTGTaGTCAGGGCGTGGATCCTCT +
Preference number: 4 (lower is better)
Translates to: TGVTVGAGRSWGRQVCQPRRQPV*SGRGSS
Trigger: AGAGGATCCACGCCCTGACCACACAGGCTGCCTACG...GGGCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp GCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCCGTAGGCAGCCTGTGTaGTCAGGGCGTGGATCCTCT +
Preference number: 4 (lower is better)
Translates to: APESQWGQAGVGVVKFASRRQPV*SGRGSS
Trigger: AGAGGATCCACGCCCTGACCACACAGGCTGCCTACG...GCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp GACCTGACCTCAGAGAGACCTGACGTTCCCCACGATCTGCTAGGAGGACTCCAGAGGTGGGGTCGGGGATaGGGCGACAGGGACCAGCAG +
Preference number: 4 (lower is better)
Translates to: DLTSERPDVPHDLLGGLQRWGRG*GDRDQQ
Trigger: CTGCTGGTCCCTGTCGCCCCATCCCCGACCCCACCT...CTGGAGTCCTCCTAGCAGATCGTGGGGAACGTCAGGTCTCTCTGAGGTCAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GTGGGGACGGCGAGAAGGCGATGTGTGACTTCACCGGCCCAGGGAGCTTCGTGTGGGGCAGGCAGGAGTTaGGGTCGTCAAGTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: VGTARRRCVTSPAQGASCGAGRS*GRQVCQ
Trigger: CTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCC...ACACGAAGCTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCGCCGTCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCCCAGACTCCACCATCCTaGCCAGGGGACGGCAAACAG +
Preference number: 4 (lower is better)
Translates to: HRSHSGGRQELGSSSLPAQTPPS*PGDGKQ
Trigger: CTGTTTGCCGTCCCCTGGCCAGGATGGTGGAGTCTG...GGCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GGGACGGCGAGAAGGCGATGTGTGACTTCACCGGCCCAGGGAGCTTCGTGTCAGCAGACTCCACCATCCTaGCCAGGGGACGGCAAACAG +
Preference number: 4 (lower is better)
Translates to: GTARRRCVTSPAQGASCQQTPPS*PGDGKQ
Trigger: CTGTTTGCCGTCCCCTGGCCAGGATGGTGGAGTCTG...CTGACACGAAGCTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCGCCGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp AGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCCTAACTGGTCTCAGCCTTaGAGCGTGGGTCCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: RQPPQGRGHHPQGPPGRPNWSQP*SVGPQR
Trigger: CCTTTGGGGACCCACGCTCCAAGGCTGAGACCAGTT...AGGCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCTGGCCTCCAGGGAACTaGTCTCAGCCTTGGAGCGTG +
Preference number: 4 (lower is better)
Translates to: APESQWGQAGVGVVKFASWPPGN*SQPWSV
Trigger: CACGCTCCAAGGCTGAGACCAGTTCCCTGGAGGCCA...GCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GTCCGCCAGGCACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTGGGGTCGGGGGCACAGGGTGGGTaGCCTCCAGGGAACTGGTCT +
Preference number: 4 (lower is better)
Translates to: VRQAQVGGEHSRKSEVGSGAQGG*PPGNWS
Trigger: AGACCAGTTCCCTGGAGGCCACCCACCCTGTGCCCC...CGACCCCACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp GGCCTCCAGGGAACTGGTCTCAGCCTTGGAGCGTGGGTCCCCAAAGGCAGCAGCGAGCTGGGTGGGGGATaGGTTGGGCCTCATTTGAGA +
Preference number: 4 (lower is better)
Translates to: GLQGTGLSLGAWVPKGSSELGGG*VGPHLR
Trigger: TCTCAAATGAGGCCCAACCCATCCCCCACCCAGCTC...GCTGCTGCCTTTGGGGACCCACGCTCCAAGGCTGAGACCAGTTCCCTGGAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCCGGACCCTGGAGTCCCTaGGAAATTGGTGGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: HRSHSGGRQELGSSSLPAGPWSP*EIGGGG
Trigger: ACCCCCACCACCAATTTCCCAGGGACTCCAGGGTCC...GGCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GGGACGGCGAGAAGGCGATGTGTGACTTCACCGGCCCAGGGAGCTTCGTGTCAGGGTGGCCACGGTCAATaGCAAGGGTTGGCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GTARRRCVTSPAQGASCQGGHGQ*QGLASS
Trigger: TGAGGAGGCCAACCCTTGCCATTGACCGTGGCCACC...CTGACACGAAGCTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCGCCGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCGGTGGCCACGGTCAATaGCAAGGGTTGGCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: APESQWGQAGVGVVKFASGGHGQ*QGLASS
Trigger: TGAGGAGGCCAACCCTTGCCATTGACCGTGGCCACC...GCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CCAGCCCAGAAAACCAAGAGCTTCCCATTAGCGCAGTCCAGCCCCACGGTGCAGTGCCCTTGTGGCTGCTaGTCCTGGGAGCCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: PAQKTKSFPLAQSSPTVQCPCGC*SWEPAG
Trigger: ACCCGCAGGCTCCCAGGACCAGCAGCCACAAGGGCA...CTGCACCGTGGGGCTGGACTGCGCTAATGGGAAGCTCTTGGTTTTCTGGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GGCCTCCAGGGAACTGGTCTCAGCCTTGGAGCGTGGGTCCCCAAAGGCAGCAGCCCCATCAGGAGGCCTTaGAAAAGCCGCCCTGCATCT +
Preference number: 4 (lower is better)
Translates to: GLQGTGLSLGAWVPKGSSPIRRP*KSRPAS
Trigger: AGATGCAGGGCGGCTTTTCCAAGGCCTCCTGATGGG...GCTGCTGCCTTTGGGGACCCACGCTCCAAGGCTGAGACCAGTTCCCTGGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCCCCATCGGGTGTCCTTTaGAGGAAGCCACCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: HRSHSGGRQELGSSSLPAPSGVL*RKPPPL
Trigger: GAGGGGAGGTGGCTTCCTCCAAAGGACACCCGATGG...GGCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp CAAGGAGTGGGGATGACAGCGTGCTGGGTGTTGGGAGGATTCAACAAGAAAGTGCCGTCCTCCCGGCGCTaGAACACCGTCCAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: QGVGMTACWVLGGFNKKVPSSRR*NTVQPP
Trigger: CGGCGGCTGGACGGTGTTTCAGCGCCGGGAGGACGG...CACTTTCTTGTTGAATCCTCCCAACACCCAGCACGCTGTCATCCCCACTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp GCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCAATAGTCAGCCACGGTaGGCGGGTACCCGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: APESQWGQAGVGVVKFASNSQPR*AGTRLP
Trigger: AGGAAGACGGGTACCCGCTCACCGTGGCTGACTATT...GCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR TCA 90 bp AGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCCTGGCACAGTTGTTCTCTaGATGGTCGCTGTCACGGTC +
Preference number: 4 (lower is better)
Translates to: RQPPQGRGHHPQGPPGRPGTVVL*MVAVTV
Trigger: GACCGTGACAGCGACCATTCAGAGAACAACTGTGCC...AGGCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR TCA 90 bp CCTGCTCTCTGTCCCCATAATGCCGGGTATTTGGCCGGGCAGGGCAGAGGGTGCGCAGGTACTGCCCATTaGGGTTGGACGTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: PALCPHNAGYLAGQGRGCAGTAH*GWTCGS
Trigger: ACTGCCACACGTCCAACCTCAATGGGCAGTACCTGC...GCACCCTCTGCCCTGCCCGGCCAAATACCCGGCATTATGGGGACAGAGAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR TCA 90 bp CCTGCTCTCTGTCCCCATAATGCCGGGTATTTGGCCGGGCAGGGCAGAGGGTGCACATTCACGAAAGAGTaGGGTGGGGTCGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: PALCPHNAGYLAGQGRGCTFTKE*GGVGDG
Trigger: CCCATCCCCGACCCCACCTCACTCTTTCGTGAATGT...GCACCCTCTGCCCTGCCCGGCCAAATACCCGGCATTATGGGGACAGAGAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp CCAGCCCAGAAAACCAAGAGCTTCCCATTAGCGCAGTCCAGCCCCACGGTGCAGCGAGAAGGCGATGTGTaGCTTCACCGGCCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PAQKTKSFPLAQSSPTVQREGDV*LHRPRE
Trigger: CTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCG...CTGCACCGTGGGGCTGGACTGCGCTAATGGGAAGCTCTTGGTTTTCTGGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp CCTGCTCTCTGTCCCCATAATGCCGGGTATTTGGCCGGGCAGGGCAGAGGGTGCGAGGCAAGAGATCAGTaGGCTGCCAAATGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: PALCPHNAGYLAGQGRGCEARDQ*AAKWRG
Trigger: CCCCCTCCATTTGGCAGCTCACTGATCTCTTGCCTC...GCACCCTCTGCCCTGCCCGGCCAAATACCCGGCATTATGGGGACAGAGAGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp ACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCCCGAGGCAAGAGATCAGTaGGCTGCCAAATGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: TGVTVGAGRSWGRQVCQPEARDQ*AAKWRG
Trigger: CCCCCTCCATTTGGCAGCTCACTGATCTCTTGCCTC...GGGCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp GCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCGAGGCAAGAGATCAGTaGGCTGCCAAATGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: APESQWGQAGVGVVKFASEARDQ*AAKWRG
Trigger: CCCCCTCCATTTGGCAGCTCACTGATCTCTTGCCTC...GCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp GAGTCCCTGGGAAATTGGTGGTGGGGGTTGTACAAGCCTCATCCCAGCCCTGCCAGCAGCTCCCCATCCTaGCCTCAGGGCCTGGTAGGA +
Preference number: 4 (lower is better)
Translates to: ESLGNWWWGLYKPHPSPASSSPS*PQGLVG
Trigger: TCCTACCAGGCCCTGAGGTCAGGATGGGGAGCTGCT...GGCAGGGCTGGGATGAGGCTTGTACAACCCCCACCACCAATTTCCCAGGGACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp GGGTCCGCCAGGCACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTGGGGTAGCAGCTCCCCATCCTaGCCTCAGGGCCTGGTAGGA +
Preference number: 4 (lower is better)
Translates to: GSARHRWVENIHERVRWGSSSPS*PQGLVG
Trigger: TCCTACCAGGCCCTGAGGTCAGGATGGGGAGCTGCT...ACCCCACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR TCA 90 bp GTCCGCCAGGCACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTGGGGTCGACCCCATTTGCCCGGTaGGGTGGTCCCTGTCCCTTG +
Preference number: 4 (lower is better)
Translates to: VRQAQVGGEHSRKSEVGSTPFAR*GGPCPL
Trigger: CAAGGGACAGGGACCACCTCACCGGGCAAATGGGGT...CGACCCCACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR GCA 90 bp GGAACCCCACACCCCCTAGGCACCTGCCATCGGGTGTCCTTTGGAGGAAGCCACATGAGGATGCTGAGGTaGGAGCTGTCCGCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: GTPHPLGTCHRVSFGGSHMRMLR*ELSALS
Trigger: GGAAAGGGCGGACAGCTCGCACCTCAGCATCCTCAT...GTGGCTTCCTCCAAAGGACACCCGATGGCAGGTGCCTAGGGGGTGTGGGGTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp CAGAGGCAAGAGATCAGTGAGCTGCCAAATGGAGGGGGTGGGGACGGCGAGAAGCCTTCCGCAGCCCCATaGACTCCGTCTGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: QRQEISELPNGGGGDGEKPSAAP*TPSAAL
Trigger: CAGAGCTGCAGACGGAGTGCATGGGGCTGCGGAAGG...CTTCTCGCCGTCCCCACCCCCTCCATTTGGCAGCTCACTGATCTCTTGCCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp CTGCGGGTCTCACCTCTGCATGTGTGCACACAAGGAGTGGGGATGACAGCGTGCTTGAGCCCTAGCCAGTaGTCCCCGGTGAGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: LRVSPLHVCTQGVGMTACLSPSQ*SPVSLP
Trigger: TGGCAGGCTCACCGGGGAGCACTGGCTAGGGCTCAA...GCACGCTGTCATCCCCACTCCTTGTGTGCACACATGCAGAGGTGAGACCCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR GCA 90 bp CTGCGGGTCTCACCTCTGCATGTGTGCACACAAGGAGTGGGGATGACAGCGTGCGGGAGTCGCCTGCAGTaGCGGAATAGTCAGCCACGG +
Preference number: 4 (lower is better)
Translates to: LRVSPLHVCTQGVGMTACGSRLQ*RNSQPR
Trigger: CCGTGGCTGACTATTCCGGCACTGCAGGCGACTCCC...GCACGCTGTCATCCCCACTCCTTGTGTGCACACATGCAGAGGTGAGACCCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR GCA 90 bp GGGTCCGCCAGGCACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTGGGGTTGGACGTGTGGCAGTTaGGGTACCACCAGGCACCGC +
Preference number: 4 (lower is better)
Translates to: GSARHRWVENIHERVRWGWTCGS*GTTRHR
Trigger: GCGGTGCCTGGTGGTACCGCAACTGCCACACGTCCA...ACCCCACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR GCA 90 bp AACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCTGGACGTGTGGCAGTTaGGGTACCACCAGGCACCGC +
Preference number: 4 (lower is better)
Translates to: NSTGVTVGAGRSWGRQVCWTCGS*GTTRHR
Trigger: GCGGTGCCTGGTGGTACCGCAACTGCCACACGTCCA...GCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR GCA 90 bp GCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCTGGGGTCGTCAAGTTTaGCAGCCCCCATCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: APESQWGQAGVGVVKFASWGRQV*QPPSAE
Trigger: CTCTGCTGATGGGGGCTGGCAAACTTGACGACCCCA...GCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp GACCTGACCTCAGAGAGACCTGACGTTCCCCACGATCTGCTAGGAGGACTCCAGGGAGGACTCCAGGGGTaGTGTCTGCCCCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: DLTSERPDVPHDLLGGLQGGLQG*CLPPAL
Trigger: GAGAGCAGGGGGCAGACAGCACCCCTGGAGTCCTCC...CTGGAGTCCTCCTAGCAGATCGTGGGGAACGTCAGGTCTCTCTGAGGTCAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp ACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCCCGTGGGGATGACAGCGTaGTGGGTGTTGGGAGGATTC +
Preference number: 4 (lower is better)
Translates to: TGVTVGAGRSWGRQVCQPVGMTA*WVLGGF
Trigger: GAATCCTCCCAACACCCAGCACGCTGTCATCCCCAC...GGGCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CTGCCCCAGGTAGGAGGACGGCCGGGAGCTGGGTGGGGGATGGGTTGGGCCTCATCTCCGCATCTTTTCTaGTCTCGGACTCTCTTTGCT +
Preference number: 4 (lower is better)
Translates to: LPQVGGRPGAGWGMGWASSPHLF*SRTLFA
Trigger: AGCAAAGAGAGTCCGAGACCAGAAAAGATGCGGAGA...TGAGGCCCAACCCATCCCCCACCCAGCTCCCGGCCGTCCTCCTACCTGGGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372338.9
CDS-3UTR CCA 90 bp TGCACACAAGGAGTGGGGATGACAGCGTGCTGGGTGTTGGGAGGATTCAACAAGTGCAGCACCGAGGCCTaGGCGCTCTCCAGGCGTGCG +
Preference number: 4 (lower is better)
Translates to: CTQGVGMTACWVLGGFNKCSTEA*ALSRRA
Trigger: CGCACGCCTGGAGAGCGCCCAGGCCTCGGTGCTGCA...CTTGTTGAATCCTCCCAACACCCAGCACGCTGTCATCCCCACTCCTTGTGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GGCGAGAAGGCGATGTGTGACTTCACCGGCCCAGGGAGCTTCGTGTCAGGGATGCGGCCGGGTAGTGGGTaGGAAAGACAGAGTAGACGC +
Preference number: 4 (lower is better)
Translates to: GEKAMCDFTGPGSFVSGMRPGSG*ERQSRR
Trigger: GCGTCTACTCTGTCTTTCCCACCCACTACCCGGCCG...CATCCCTGACACGAAGCTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGCCAGGCACAGGTGGGTaGAGAACATTCACGAAAGAG +
Preference number: 4 (lower is better)
Translates to: PSWPGDGKQHRSHSGGRQPGTGG*RTFTKE
Trigger: CTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGG...CTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GGAACCCCACACCCCCTAGGCACCTGCCATCGGGTGTCCTTTGGAGGAAGCCACATAATGCCGGGTATTTaGCCGGGCAGGGCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: GTPHPLGTCHRVSFGGSHIMPGI*PGRAEG
Trigger: ACCCTCTGCCCTGCCCGGCCAAATACCCGGCATTAT...GTGGCTTCCTCCAAAGGACACCCGATGGCAGGTGCCTAGGGGGTGTGGGGTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GTGGGGACGGCGAGAAGGCGATGTGTGACTTCACCGGCCCAGGGAGCTTCGTGTATAATGCCGGGTATTTaGCCGGGCAGGGCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: VGTARRRCVTSPAQGASCIMPGI*PGRAEG
Trigger: ACCCTCTGCCCTGCCCGGCCAAATACCCGGCATTAT...ACACGAAGCTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCGCCGTCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp ACCCTGGAGTCCCTGGGAAATTGGTGGTGGGGGTTGTACAAGCCTCATCCCAGCCCCTTGGGGGAGAGGTaGGTTCTCTGGGCACCAGGG +
Preference number: 4 (lower is better)
Translates to: TLESLGNWWWGLYKPHPSPLGER*VLWAPG
Trigger: CCCTGGTGCCCAGAGAACCCACCTCTCCCCCAAGGG...GCTGGGATGAGGCTTGTACAACCCCCACCACCAATTTCCCAGGGACTCCAGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CCTGCTCTCTGTCCCCATAATGCCGGGTATTTGGCCGGGCAGGGCAGAGGGTGCGAGCTGGGTGGGGGATaGGTTGGGCCTCATTTGAGA +
Preference number: 4 (lower is better)
Translates to: PALCPHNAGYLAGQGRGCELGGG*VGPHLR
Trigger: TCTCAAATGAGGCCCAACCCATCCCCCACCCAGCTC...GCACCCTCTGCCCTGCCCGGCCAAATACCCGGCATTATGGGGACAGAGAGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GCTGGGTGGGGGATGGGTTGGGCCTCATTTGAGACAGAGAGCAGGTGGGCACAGCAGAGGCAGGAGAAATaGGATGGCAGCCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: AGWGMGWASFETESRWAQQRQEK*DGSPSC
Trigger: GCAGCTGGGGCTGCCATCCCATTTCTCCTGCCTCTG...CTGTGCCCACCTGCTCTCTGTCTCAAATGAGGCCCAACCCATCCCCCACCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTCCCTGGGAAATTaGTGGTGGGGGTTGTACAAG +
Preference number: 4 (lower is better)
Translates to: PSWPGDGKQHRSHSGGRQESLGN*WWGLYK
Trigger: CTTGTACAACCCCCACCACCAATTTCCCAGGGACTC...CTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GCTGGGTGGGGGATGGGTTGGGCCTCATTTGAGACAGAGAGCAGGTGGGCACAGGGACCCTGGAGTCCCTaGGAAATTGGTGGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: AGWGMGWASFETESRWAQGPWSP*EIGGGG
Trigger: ACCCCCACCACCAATTTCCCAGGGACTCCAGGGTCC...CTGTGCCCACCTGCTCTCTGTCTCAAATGAGGCCCAACCCATCCCCCACCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GGCCTCCAGGGAACTGGTCTCAGCCTTGGAGCGTGGGTCCCCAAAGGCAGCAGCGTCAATGGCAAGGGTTaGCCTCCTCATGGAGACAGC +
Preference number: 4 (lower is better)
Translates to: GLQGTGLSLGAWVPKGSSVNGKG*PPHGDS
Trigger: GCTGTCTCCATGAGGAGGCCAACCCTTGCCATTGAC...GCTGCTGCCTTTGGGGACCCACGCTCCAAGGCTGAGACCAGTTCCCTGGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GCCTCATCCCAGCCCTGCCTAGGCCCCAGCCCAGAAAACCAAGAGCTTCCCATTTGGCCTGGGTCCAGGTaGCCACGGTCAATGGCAAGG +
Preference number: 4 (lower is better)
Translates to: ASSQPCLGPSPENQELPIWPGSR*PRSMAR
Trigger: CCTTGCCATTGACCGTGGCCACCTGGACCCAGGCCA...AATGGGAAGCTCTTGGTTTTCTGGGCTGGGGCCTAGGCAGGGCTGGGATGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GGAGTCCCTGGGAAATTGGTGGTGGGGGTTGTACAAGCCTCATCCCAGCCCTGCTGGCCTGGGTCCAGGTaGCCACGGTCAATGGCAAGG +
Preference number: 4 (lower is better)
Translates to: GVPGKLVVGVVQASSQPCWPGSR*PRSMAR
Trigger: CCTTGCCATTGACCGTGGCCACCTGGACCCAGGCCA...GCAGGGCTGGGATGAGGCTTGTACAACCCCCACCACCAATTTCCCAGGGACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GCTGGGTGGGGGATGGGTTGGGCCTCATTTGAGACAGAGAGCAGGTGGGCACAGCCATCGGGTGTCCTTTaGAGGAAGCCACCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: AGWGMGWASFETESRWAQPSGVL*RKPPPL
Trigger: GAGGGGAGGTGGCTTCCTCCAAAGGACACCCGATGG...CTGTGCCCACCTGCTCTCTGTCTCAAATGAGGCCCAACCCATCCCCCACCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGATGACCTGGTGGCACTaGGACAGAGAGCCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: RQTAPESQWGQAGVGVVKMTWWH*DREPGH
Trigger: GTGACCTGGCTCTCTGTCCCAGTGCCACCAGGTCAT...CTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CCTGCTCTCTGTCCCCATAATGCCGGGTATTTGGCCGGGCAGGGCAGAGGGTGCATGACCTGGTGGCACTaGGACAGAGAGCCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: PALCPHNAGYLAGQGRGCMTWWH*DREPGH
Trigger: GTGACCTGGCTCTCTGTCCCAGTGCCACCAGGTCAT...GCACCCTCTGCCCTGCCCGGCCAAATACCCGGCATTATGGGGACAGAGAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCCGCATGTGGATGACCTaGTGGCACTGGGACAGAGAG +
Preference number: 4 (lower is better)
Translates to: APESQWGQAGVGVVKFASRMWMT*WHWDRE
Trigger: CTCTCTGTCCCAGTGCCACCAGGTCATCCACATGCG...GCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp GGTCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTGTGCGAAGCTGTCGGTaGGGTCGGGGCAGCGCGGGT +
Preference number: 4 (lower is better)
Translates to: GHTASPTNPQWCQVKFIVVRSCR*GRGSAG
Trigger: ACCCGCGCTGCCCCGACCTCACCGACAGCTTCGCAC...AACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp CAGAGGCAAGAGATCAGTGAGCTGCCAAATGGAGGGGGTGGGGACGGCGAGAAGCAGAGAGAAGCTGGATaGGGCGGCCCTGCTCACTCT +
Preference number: 4 (lower is better)
Translates to: QRQEISELPNGGGGDGEKQREAG*GGPAHS
Trigger: AGAGTGAGCAGGGCCGCCTCATCCAGCTTCTCTCTG...CTTCTCGCCGTCCCCACCCCCTCCATTTGGCAGCTCACTGATCTCTTGCCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp GAGTGGGTCCGCCAGGCACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTGACGGAGTTCACCAGGTaGGCCATGTGGCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: EWVRQAQVGGEHSRKSEVTEFTR*AMWPWL
Trigger: GAGCCAGGGCCACATGGCTCACCTGGTGAACTCCGT...CACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGACCCACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR TCA 90 bp GGCGAGAAGGCGATGTGTGACTTCACCGGCCCAGGGAGCTTCGTGTCAGGGATGCATCCAGGATGTCGCTaGCGGAGTTCACCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: GEKAMCDFTGPGSFVSGMHPGCR*RSSPGE
Trigger: CTCACCTGGTGAACTCCGTCAGCGACATCCTGGATG...CATCCCTGACACGAAGCTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp GAGTCCCTGGGAAATTGGTGGTGGGGGTTGTACAAGCCTCATCCCAGCCCTGCCCACGGTCCTTGGTGGTaGACCTCATGCCGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: ESLGNWWWGLYKPHPSPAHGPWW*TSCRCA
Trigger: AGCACAGCGGCATGAGGTTCACCACCAAGGACCGTG...GGCAGGGCTGGGATGAGGCTTGTACAACCCCCACCACCAATTTCCCAGGGACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR TCA 90 bp GGGACGGCGAGAAGGCGATGTGTGACTTCACCGGCCCAGGGAGCTTCGTGTCAGCTCAGAGAACTTGAGTaGGTACTGCCAGCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: GTARRRCVTSPAQGASCQLRELE*VLPAGP
Trigger: TGGACCGGCTGGCAGTACTCACTCAAGTTCTCTGAG...CTGACACGAAGCTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCGCCGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR TCA 90 bp CGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGCTCAGAGAACTTGAGTaGGTACTGCCAGCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: RQTAPESQWGQAGVGVVKLRELE*VLPAGP
Trigger: TGGACCGGCTGGCAGTACTCACTCAAGTTCTCTGAG...CTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR TCA 90 bp GAACTGGTCTCAGCCTTGGAGCGTGGGTCCCCAAAGGCAGCAGCTCCCCATCCTGAGGCAAGAGATCAGTaGGCTGCCAAATGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: ELVSALERGSPKAAAPHPEARDQ*AAKWRG
Trigger: CCCCCTCCATTTGGCAGCTCACTGATCTCTTGCCTC...AGGATGGGGAGCTGCTGCCTTTGGGGACCCACGCTCCAAGGCTGAGACCAGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp AACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCGGGTTGGGCCTCATTTaGGACAGAGAGCAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: NSTGVTVGAGRSWGRQVCGLGLI*DREQVG
Trigger: GCCCACCTGCTCTCTGTCTCAAATGAGGCCCAACCC...GCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp TGCACACAAGGAGTGGGGATGACAGCGTGCTGGGTGTTGGGAGGATTCAACAAGCGTGGCTGGGCCTGGTaGTCTGTCAGCGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: CTQGVGMTACWVLGGFNKRGWAW*SVSACS
Trigger: GCTGCAGGCGCTGACAGAGCACCAGGCCCAGCCACG...CTTGTTGAATCCTCCCAACACCCAGCACGCTGTCATCCCCACTCCTTGTGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp GTCCGCCAGGCACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTGGGGTCGGCACCGCGCAGGTACTaGCCATTGAGGTTGGACGTG +
Preference number: 4 (lower is better)
Translates to: VRQAQVGGEHSRKSEVGSAPRRY*PLRLDV
Trigger: CACGTCCAACCTCAATGGGCAGTACCTGCGCGGTGC...CGACCCCACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR GCA 90 bp GCCTCATCCCAGCCCTGCCTAGGCCCCAGCCCAGAAAACCAAGAGCTTCCCATTGGGCCAAGGACAAGGTaGACCAGTCTAGCGGTCCTC +
Preference number: 4 (lower is better)
Translates to: ASSQPCLGPSPENQELPIGPRTR*TSLAVL
Trigger: GAGGACCGCTAGACTGGTGCACCTTGTCCTTGGCCC...AATGGGAAGCTCTTGGTTTTCTGGGCTGGGGCCTAGGCAGGGCTGGGATGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR GCA 90 bp GGCGAGAAGGCGATGTGTGACTTCACCGGCCCAGGGAGCTTCGTGTCAGGGATGAAAGTGTCCAGGTGGTaGCTGGTCTGGTGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: GEKAMCDFTGPGSFVSGMKVSRW*LVWCPS
Trigger: ACTGGGGCACCAGACCAGGCACCACCTGGACACTTT...CATCCCTGACACGAAGCTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp AGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCCTTCACCTCTGCATGTGTaGACACAAGGAGTGGGGATG +
Preference number: 4 (lower is better)
Translates to: RQPPQGRGHHPQGPPGRPSPLHV*TQGVGM
Trigger: CATCCCCACTCCTTGTGTGCACACATGCAGAGGTGA...AGGCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp GGGACGGCGAGAAGGCGATGTGTGACTTCACCGGCCCAGGGAGCTTCGTGTCAGTGCGGGTCTCACCTCTaGATGTGTGCACACAAGGAG +
Preference number: 4 (lower is better)
Translates to: GTARRRCVTSPAQGASCQCGSHL*MCAHKE
Trigger: CTCCTTGTGTGCACACATGCAGAGGTGAGACCCGCA...CTGACACGAAGCTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCGCCGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp CCAGCCCAGAAAACCAAGAGCTTCCCATTAGCGCAGTCCAGCCCCACGGTGCAGCACCCCCTAGGCACCTaGCATCGGGTGTCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: PAQKTKSFPLAQSSPTVQHPLGT*HRVSFG
Trigger: TCCAAAGGACACCCGATGGCAGGTGCCTAGGGGGTG...CTGCACCGTGGGGCTGGACTGCGCTAATGGGAAGCTCTTGGTTTTCTGGGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CAGAGGCAAGAGATCAGTGAGCTGCCAAATGGAGGGGGTGGGGACGGCGAGAAGCGGCCGGGTAGTGGGTaGGAAAGACAGAGTAGACGC +
Preference number: 4 (lower is better)
Translates to: QRQEISELPNGGGGDGEKRPGSG*ERQSRR
Trigger: GCGTCTACTCTGTCTTTCCCACCCACTACCCGGCCG...CTTCTCGCCGTCCCCACCCCCTCCATTTGGCAGCTCACTGATCTCTTGCCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CCAGGGAGCTTCGTGTCAGGGATGGCCCGGCCCCTCCCTACTGGAGAGTGGGTCCAGTTGTTCTCTGAATaGTCGCTGTCACGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: PGSFVSGMARPLPTGEWVQLFSE*SLSRSL
Trigger: CAAGGACCGTGACAGCGACCATTCAGAGAACAACTG...GACCCACTCTCCAGTAGGGAGGGGCCGGGCCATCCCTGACACGAAGCTCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp GAGTGGGTCCGCCAGGCACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTGCACGAAAGAGTGAGGTaGGGTCGGGGATGGGGCGAC +
Preference number: 4 (lower is better)
Translates to: EWVRQAQVGGEHSRKSEVHERVR*GRGWGD
Trigger: GTCGCCCCATCCCCGACCCCACCTCACTCTTTCGTG...CACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGACCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp GACTCCACCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCCAGGCACAGGTGGGTaGAGAACATTCACGAAAGAG +
Preference number: 4 (lower is better)
Translates to: DSTILARGRQTAPESQWGPGTGG*RTFTKE
Trigger: CTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGG...CCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGGTGGAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GTGGGGACGGCGAGAAGGCGATGTGTGACTTCACCGGCCCAGGGAGCTTCGTGTTCCGCCAGGCACAGGTaGGTGGAGAACATTCACGAA +
Preference number: 4 (lower is better)
Translates to: VGTARRRCVTSPAQGASCSARHR*VENIHE
Trigger: TTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGA...ACACGAAGCTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCGCCGTCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GTCCGCCAGGCACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTGGGGTCGCAGACTCCACCATCCTaGCCAGGGGACGGCAAACAG +
Preference number: 4 (lower is better)
Translates to: VRQAQVGGEHSRKSEVGSQTPPS*PGDGKQ
Trigger: CTGTTTGCCGTCCCCTGGCCAGGATGGTGGAGTCTG...CGACCCCACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp ACCCTGGAGTCCCTGGGAAATTGGTGGTGGGGGTTGTACAAGCCTCATCCCAGCAGGGCAGAGGGTGCCTaGGGCAGACTCCACCATCCT +
Preference number: 4 (lower is better)
Translates to: TLESLGNWWWGLYKPHPSRAEGA*GRLHHP
Trigger: AGGATGGTGGAGTCTGCCCCAGGCACCCTCTGCCCT...GCTGGGATGAGGCTTGTACAACCCCCACCACCAATTTCCCAGGGACTCCAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CCAGCCCAGAAAACCAAGAGCTTCCCATTAGCGCAGTCCAGCCCCACGGTGCAGGGTGGGGGTTGGCATTaGGAGGGCTGGAGGATACTG +
Preference number: 4 (lower is better)
Translates to: PAQKTKSFPLAQSSPTVQGGGWH*EGWRIL
Trigger: CAGTATCCTCCAGCCCTCCCAATGCCAACCCCCACC...CTGCACCGTGGGGCTGGACTGCGCTAATGGGAAGCTCTTGGTTTTCTGGGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GCCTCATCCCAGCCCTGCCTAGGCCCCAGCCCAGAAAACCAAGAGCTTCCCATTGGTGGGGGTTGGCATTaGGAGGGCTGGAGGATACTG +
Preference number: 4 (lower is better)
Translates to: ASSQPCLGPSPENQELPIGGGWH*EGWRIL
Trigger: CAGTATCCTCCAGCCCTCCCAATGCCAACCCCCACC...AATGGGAAGCTCTTGGTTTTCTGGGCTGGGGCCTAGGCAGGGCTGGGATGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTACCAGGGAAACGGGGTaGGGGTTGGCATTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: QTAPESQWGQAGVGVVKFTRETG*GLALGG
Trigger: CCCTCCCAATGCCAACCCCCACCCCGTTTCCCTGGT...AAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CTGCGGGTCTCACCTCTGCATGTGTGCACACAAGGAGTGGGGATGACAGCGTGCGAGAGGTGGGTTCTCTaGGCACCAGGGAAACGGGGT +
Preference number: 4 (lower is better)
Translates to: LRVSPLHVCTQGVGMTACERWVL*APGKRG
Trigger: ACCCCGTTTCCCTGGTGCCCAGAGAACCCACCTCTC...GCACGCTGTCATCCCCACTCCTTGTGTGCACACATGCAGAGGTGAGACCCGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GGGTCCGCCAGGCACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTGGGGTGAGAGGTGGGTTCTCTaGGCACCAGGGAAACGGGGT +
Preference number: 4 (lower is better)
Translates to: GSARHRWVENIHERVRWGERWVL*APGKRG
Trigger: ACCCCGTTTCCCTGGTGCCCAGAGAACCCACCTCTC...ACCCCACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp CCAGCCCAGAAAACCAAGAGCTTCCCATTAGCGCAGTCCAGCCCCACGGTGCAGTGGCCTCCAGGGAACTaGTCTCAGCCTTGGAGCGTG +
Preference number: 4 (lower is better)
Translates to: PAQKTKSFPLAQSSPTVQWPPGN*SQPWSV
Trigger: CACGCTCCAAGGCTGAGACCAGTTCCCTGGAGGCCA...CTGCACCGTGGGGCTGGACTGCGCTAATGGGAAGCTCTTGGTTTTCTGGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CAAGGAGTGGGGATGACAGCGTGCTGGGTGTTGGGAGGATTCAACAAGAAAGTGAGGACGGCCGGGAGCTaGGTGGGGGATGGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: QGVGMTACWVLGGFNKKVRTAGS*VGDGLG
Trigger: GCCCAACCCATCCCCCACCCAGCTCCCGGCCGTCCT...CACTTTCTTGTTGAATCCTCCCAACACCCAGCACGCTGTCATCCCCACTCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GACTCCACCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGGAGTCCCTGGGAAATTaGTGGTGGGGGTTGTACAAG +
Preference number: 4 (lower is better)
Translates to: DSTILARGRQTAPESQWGESLGN*WWGLYK
Trigger: CTTGTACAACCCCCACCACCAATTTCCCAGGGACTC...CCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGGTGGAGTC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GGGACGGCGAGAAGGCGATGTGTGACTTCACCGGCCCAGGGAGCTTCGTGTCAGGTCAATGGCAAGGGTTaGCCTCCTCATGGAGACAGC +
Preference number: 4 (lower is better)
Translates to: GTARRRCVTSPAQGASCQVNGKG*PPHGDS
Trigger: GCTGTCTCCATGAGGAGGCCAACCCTTGCCATTGAC...CTGACACGAAGCTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCGCCGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GCTGGGTGGGGGATGGGTTGGGCCTCATTTGAGACAGAGAGCAGGTGGGCACAGAAGAAAGTGTCCAGGTaGTGCCTGGTCTGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: AGWGMGWASFETESRWAQKKVSR*CLVWCP
Trigger: GGGGCACCAGACCAGGCACCACCTGGACACTTTCTT...CTGTGCCCACCTGCTCTCTGTCTCAAATGAGGCCCAACCCATCCCCCACCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCCGGGATGACAGCGTGCTaGGTGTTGGGAGGATTCAAC +
Preference number: 4 (lower is better)
Translates to: HRSHSGGRQELGSSSLPAGMTAC*VLGGFN
Trigger: GTTGAATCCTCCCAACACCCAGCACGCTGTCATCCC...GGCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGGGGATGACAGCGTGCTaGGTGTTGGGAGGATTCAAC +
Preference number: 4 (lower is better)
Translates to: RQTAPESQWGQAGVGVVKGMTAC*VLGGFN
Trigger: GTTGAATCCTCCCAACACCCAGCACGCTGTCATCCC...CTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CCAGCCCAGAAAACCAAGAGCTTCCCATTAGCGCAGTCCAGCCCCACGGTGCAGCCATCGGGTGTCCTTTaGAGGAAGCCACCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: PAQKTKSFPLAQSSPTVQPSGVL*RKPPPL
Trigger: GAGGGGAGGTGGCTTCCTCCAAAGGACACCCGATGG...CTGCACCGTGGGGCTGGACTGCGCTAATGGGAAGCTCTTGGTTTTCTGGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp AACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCTCTTCCACCGGTCGTTaGCCATCTTCCGGCAGGACT +
Preference number: 4 (lower is better)
Translates to: NSTGVTVGAGRSWGRQVCSSTGR*PSSGRT
Trigger: AGTCCTGCCGGAAGATGGTCAACGACCGGTGGAAGA...GCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR TCA 90 bp CAAGGAGTGGGGATGACAGCGTGCTGGGTGTTGGGAGGATTCAACAAGAAAGTGCCGCCCTTTCCACAGTaGCCAGGGCGCTGTTGGCGC +
Preference number: 4 (lower is better)
Translates to: QGVGMTACWVLGGFNKKVPPFPQ*PGRCWR
Trigger: GCGCCAACAGCGCCCTGGTCACTGTGGAAAGGGCGG...CACTTTCTTGTTGAATCCTCCCAACACCCAGCACGCTGTCATCCCCACTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp GGCGAGAAGGCGATGTGTGACTTCACCGGCCCAGGGAGCTTCGTGTCAGGGATGGGCACAGTTGTTCTCTaGATGGTCGCTGTCACGGTC +
Preference number: 4 (lower is better)
Translates to: GEKAMCDFTGPGSFVSGMGTVVL*MVAVTV
Trigger: GACCGTGACAGCGACCATTCAGAGAACAACTGTGCC...CATCCCTGACACGAAGCTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR TCA 90 bp GTGGGGACGGCGAGAAGGCGATGTGTGACTTCACCGGCCCAGGGAGCTTCGTGTTCATCTCAGAGAACTTaGGTGAGTACTGCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: VGTARRRCVTSPAQGASCSSQRT*VSTASR
Trigger: CCGGCTGGCAGTACTCACTCAAGTTCTCTGAGATGA...ACACGAAGCTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCGCCGTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR TCA 90 bp GGAGTCCCTGGGAAATTGGTGGTGGGGGTTGTACAAGCCTCATCCCAGCCCTGCACATTCACGAAAGAGTaGGGTGGGGTCGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: GVPGKLVVGVVQASSQPCTFTKE*GGVGDG
Trigger: CCCATCCCCGACCCCACCTCACTCTTTCGTGAATGT...GCAGGGCTGGGATGAGGCTTGTACAACCCCCACCACCAATTTCCCAGGGACTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp GGTCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTCCCTGCATCTGGGCCTaGCGTAACGCACGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: GHTASPTNPQWCQVKFIVPCIWA*RNARGS
Trigger: GGACCCGCGTGCGTTACGTCAGGCCCAGATGCAGGG...AACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp GGGTCCGCCAGGCACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTGGGGTATGAGGATGCTGAGGTaGGAGCTGTCCGCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: GSARHRWVENIHERVRWGMRMLR*ELSALS
Trigger: GGAAAGGGCGGACAGCTCGCACCTCAGCATCCTCAT...ACCCCACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR GCA 90 bp TCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTTTGAAGGTCGGCCTTGTTaGGGGGCCGGCCCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: SHGLSHQPPVVPSQIYCFEGRPC*GAGPAP
Trigger: GGGGGCTGGGCCGGCCCCGCAACAAGGCCGACCTTC...AAAACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp AACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCAACCTCATGCCGCTGTaGTTCAGGAGGGAGTCGCCT +
Preference number: 4 (lower is better)
Translates to: NSTGVTVGAGRSWGRQVCNLMPL*FRRESP
Trigger: AGGCGACTCCCTCCTGAAGCACAGCGGCATGAGGTT...GCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR GCA 90 bp GAGTCCCTGGGAAATTGGTGGTGGGGGTTGTACAAGCCTCATCCCAGCCCTGCCAACCTCATGCCGCTGTaGTTCAGGAGGGAGTCGCCT +
Preference number: 4 (lower is better)
Translates to: ESLGNWWWGLYKPHPSPANLMPL*FRRESP
Trigger: AGGCGACTCCCTCCTGAAGCACAGCGGCATGAGGTT...GGCAGGGCTGGGATGAGGCTTGTACAACCCCCACCACCAATTTCCCAGGGACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR GCA 90 bp GAACTGGTCTCAGCCTTGGAGCGTGGGTCCCCAAAGGCAGCAGCTCCCCATCCTAAGAGATCAGTGAGCTaGCAAATGGAGGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: ELVSALERGSPKAAAPHPKRSVS*QMEGVG
Trigger: CCCCACCCCCTCCATTTGGCAGCTCACTGATCTCTT...AGGATGGGGAGCTGCTGCCTTTGGGGACCCACGCTCCAAGGCTGAGACCAGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp GGCGAGAAGGCGATGTGTGACTTCACCGGCCCAGGGAGCTTCGTGTCAGGGATGAAGAGATCAGTGAGCTaGCAAATGGAGGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GEKAMCDFTGPGSFVSGMKRSVS*QMEGVG
Trigger: CCCCACCCCCTCCATTTGGCAGCTCACTGATCTCTT...CATCCCTGACACGAAGCTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp CCAGCCCAGAAAACCAAGAGCTTCCCATTAGCGCAGTCCAGCCCCACGGTGCAGAAAGTGTCCAGGTGGTaGCTGGTCTGGTGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: PAQKTKSFPLAQSSPTVQKVSRW*LVWCPS
Trigger: ACTGGGGCACCAGACCAGGCACCACCTGGACACTTT...CTGCACCGTGGGGCTGGACTGCGCTAATGGGAAGCTCTTGGTTTTCTGGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp GGAGTCCCTGGGAAATTGGTGGTGGGGGTTGTACAAGCCTCATCCCAGCCCTGCGTGGGGATGACAGCGTaGTGGGTGTTGGGAGGATTC +
Preference number: 4 (lower is better)
Translates to: GVPGKLVVGVVQASSQPCVGMTA*WVLGGF
Trigger: GAATCCTCCCAACACCCAGCACGCTGTCATCCCCAC...GCAGGGCTGGGATGAGGCTTGTACAACCCCCACCACCAATTTCCCAGGGACTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp ACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCCCTCACCTCTGCATGTGTaGACACAAGGAGTGGGGATG +
Preference number: 4 (lower is better)
Translates to: TGVTVGAGRSWGRQVCQPSPLHV*TQGVGM
Trigger: CATCCCCACTCCTTGTGTGCACACATGCAGAGGTGA...GGGCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CAAGGAGTGGGGATGACAGCGTGCTGGGTGTTGGGAGGATTCAACAAGAAAGTGGGCCGGTCCTCAAGTTaGGCAGCGCCGCCCATGGTC +
Preference number: 4 (lower is better)
Translates to: QGVGMTACWVLGGFNKKVGRSSS*AAPPMV
Trigger: GACCATGGGCGGCGCTGCCCAACTTGAGGACCGGCC...CACTTTCTTGTTGAATCCTCCCAACACCCAGCACGCTGTCATCCCCACTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp CAAGGAGTGGGGATGACAGCGTGCTGGGTGTTGGGAGGATTCAACAAGAAAGTGCCCGGCGCGTGGGCGTaGTTCAGGAAGAGCACGGCA +
Preference number: 4 (lower is better)
Translates to: QGVGMTACWVLGGFNKKVPGAWA*FRKSTA
Trigger: TGCCGTGCTCTTCCTGAACCACGCCCACGCGCCGGG...CACTTTCTTGTTGAATCCTCCCAACACCCAGCACGCTGTCATCCCCACTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GGGTCCGCCAGGCACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTGGGGTCTCTCAGAGAGAAGCTaGATGAGGCGGCCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GSARHRWVENIHERVRWGLSERS*MRRPCS
Trigger: TGAGCAGGGCCGCCTCATCCAGCTTCTCTCTGAGAG...ACCCCACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp ACTCCACCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCCAGTTGTTCTCTGAATaGTCGCTGTCACGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: TPPSWPGDGKQHRSHSGGQLFSE*SLSRSL
Trigger: CAAGGACCGTGACAGCGACCATTCAGAGAACAACTG...GCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGGTGGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp GGCGAGAAGGCGATGTGTGACTTCACCGGCCCAGGGAGCTTCGTGTCAGGGATGTTGAGGTTGGACGTGTaGCAGTTGCGGTACCACCAG +
Preference number: 4 (lower is better)
Translates to: GEKAMCDFTGPGSFVSGMLRLDV*QLRYHQ
Trigger: CTGGTGGTACCGCAACTGCCACACGTCCAACCTCAA...CATCCCTGACACGAAGCTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp GCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCCCAGGCACAGGTGGGTaGAGAACATTCACGAAAGAG +
Preference number: 4 (lower is better)
Translates to: APESQWGQAGVGVVKFASPGTGG*RTFTKE
Trigger: CTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGG...GCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GAGTGGGTCCGCCAGGCACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTGGGGGCAGGCAGGAGTTaGGGTCGTCAAGTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: EWVRQAQVGGEHSRKSEVGAGRS*GRQVCQ
Trigger: CTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCC...CACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGACCCACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp AACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCAACTGGTCTCAGCCTTaGAGCGTGGGTCCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: NSTGVTVGAGRSWGRQVCNWSQP*SVGPQR
Trigger: CCTTTGGGGACCCACGCTCCAAGGCTGAGACCAGTT...GCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp ACCCTGGAGTCCCTGGGAAATTGGTGGTGGGGGTTGTACAAGCCTCATCCCAGCTGGCCTCCAGGGAACTaGTCTCAGCCTTGGAGCGTG +
Preference number: 4 (lower is better)
Translates to: TLESLGNWWWGLYKPHPSWPPGN*SQPWSV
Trigger: CACGCTCCAAGGCTGAGACCAGTTCCCTGGAGGCCA...GCTGGGATGAGGCTTGTACAACCCCCACCACCAATTTCCCAGGGACTCCAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GTCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTTCGGCCGGGAGCTGGGTaGGGGATGGGTTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: VTRPLPPTPSGAKSNLLFRPGAG*GMGWAS
Trigger: TGAGGCCCAACCCATCCCCCACCCAGCTCCCGGCCG...AAACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp ACCCTGGAGTCCCTGGGAAATTGGTGGTGGGGGTTGTACAAGCCTCATCCCAGCGGACCCTGGAGTCCCTaGGAAATTGGTGGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: TLESLGNWWWGLYKPHPSGPWSP*EIGGGG
Trigger: ACCCCCACCACCAATTTCCCAGGGACTCCAGGGTCC...GCTGGGATGAGGCTTGTACAACCCCCACCACCAATTTCCCAGGGACTCCAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GACCTGACCTCAGAGAGACCTGACGTTCCCCACGATCTGCTAGGAGGACTCCAGGGTGGCCACGGTCAATaGCAAGGGTTGGCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: DLTSERPDVPHDLLGGLQGGHGQ*QGLASS
Trigger: TGAGGAGGCCAACCCTTGCCATTGACCGTGGCCACC...CTGGAGTCCTCCTAGCAGATCGTGGGGAACGTCAGGTCTCTCTGAGGTCAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GCTGGGTGGGGGATGGGTTGGGCCTCATTTGAGACAGAGAGCAGGTGGGCACAGGGGATGACAGCGTGCTaGGTGTTGGGAGGATTCAAC +
Preference number: 4 (lower is better)
Translates to: AGWGMGWASFETESRWAQGMTAC*VLGGFN
Trigger: GTTGAATCCTCCCAACACCCAGCACGCTGTCATCCC...CTGTGCCCACCTGCTCTCTGTCTCAAATGAGGCCCAACCCATCCCCCACCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GGAGTCCCTGGGAAATTGGTGGTGGGGGTTGTACAAGCCTCATCCCAGCCCTGCCCCATCAGGAGGCCTTaGAAAAGCCGCCCTGCATCT +
Preference number: 4 (lower is better)
Translates to: GVPGKLVVGVVQASSQPCPIRRP*KSRPAS
Trigger: AGATGCAGGGCGGCTTTTCCAAGGCCTCCTGATGGG...GCAGGGCTGGGATGAGGCTTGTACAACCCCCACCACCAATTTCCCAGGGACTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCCAAGCACAAACTTCAGTaGGAGGGGAAGGGAGAACGG +
Preference number: 4 (lower is better)
Translates to: HRSHSGGRQELGSSSLPAKHKLQ*EGKGER
Trigger: CCGTTCTCCCTTCCCCTCCCACTGAAGTTTGTGCTT...GGCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp ACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCCCAAGCACAAACTTCAGTaGGAGGGGAAGGGAGAACGG +
Preference number: 4 (lower is better)
Translates to: TGVTVGAGRSWGRQVCQPKHKLQ*EGKGER
Trigger: CCGTTCTCCCTTCCCCTCCCACTGAAGTTTGTGCTT...GGGCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCCTGGGTGAGACAAACCTaGCCACAAGGGAGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: HRSHSGGRQELGSSSLPAWVRQT*PQGRRE
Trigger: TTCTCTCCTCCCTTGTGGCCAGGTTTGTCTCACCCA...GGCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372337.6
CDS-3UTR TCA 90 bp TGCACACAAGGAGTGGGGATGACAGCGTGCTGGGTGTTGGGAGGATTCAACAAGAGAGCACGGCACCGGTaGCAGCTACAGCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: CTQGVGMTACWVLGGFNKRARHR*QLQPAA
Trigger: TGCTGCTGGCTGTAGCTGTCACCGGTGCCGTGCTCT...CTTGTTGAATCCTCCCAACACCCAGCACGCTGTCATCCCCACTCCTTGTGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR TCA 90 bp CAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTCATCCAGGATGTCGCTaGCGGAGTTCACCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: QTAPESQWGQAGVGVVKFHPGCR*RSSPGE
Trigger: CTCACCTGGTGAACTCCGTCAGCGACATCCTGGATG...AAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp CAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTAATAGTCAGCCACGGTaGGCGGGTACCCGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: QTAPESQWGQAGVGVVKFNSQPR*AGTRLP
Trigger: AGGAAGACGGGTACCCGCTCACCGTGGCTGACTATT...AAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR TCA 90 bp AGTGGGTCCGCCAGGCACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTGGACATTCACGAAAGAGTaGGGTGGGGTCGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: SGSARHRWVENIHERVRWTFTKE*GGVGDG
Trigger: CCCATCCCCGACCCCACCTCACTCTTTCGTGAATGT...CCACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGACCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR TCA 90 bp TGCACACAAGGAGTGGGGATGACAGCGTGCTGGGTGTTGGGAGGATTCAACAAGAGCAGCTCCCCATCCTaGCCTCAGGGCCTGGTAGGA +
Preference number: 4 (lower is better)
Translates to: CTQGVGMTACWVLGGFNKSSSPS*PQGLVG
Trigger: TCCTACCAGGCCCTGAGGTCAGGATGGGGAGCTGCT...CTTGTTGAATCCTCCCAACACCCAGCACGCTGTCATCCCCACTCCTTGTGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp CACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCCGTTCTCTCTTTCTTCTaGCAGTGGCCACAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: HRSHSGGRQELGSSSLPAVLSFF*QWPQER
Trigger: CCTTTCCTGTGGCCACTGTCAGAAGAAAGAGAGAAC...GGCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372337.6
CDS-3UTR TCA 90 bp GGGTCCGCCAGGCACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTGGGGTCAGCATGTCAGTGGGTaGGACAAACCTGGCCACAAG +
Preference number: 4 (lower is better)
Translates to: GSARHRWVENIHERVRWGQHVSG*DKPGHK
Trigger: CTTGTGGCCAGGTTTGTCTCACCCACTGACATGCTG...ACCCCACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372337.6
CDS-3UTR GCA 90 bp ACCCTGGAGTCCCTGGGAAATTGGTGGTGGGGGTTGTACAAGCCTCATCCCAGCATGAGGATGCTGAGGTaGGAGCTGTCCGCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: TLESLGNWWWGLYKPHPSMRMLR*ELSALS
Trigger: GGAAAGGGCGGACAGCTCGCACCTCAGCATCCTCAT...GCTGGGATGAGGCTTGTACAACCCCCACCACCAATTTCCCAGGGACTCCAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp CAAGGAGTGGGGATGACAGCGTGCTGGGTGTTGGGAGGATTCAACAAGAAAGTGCCCATGCACTCCGTCTaGAGCTCTGAGGCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: QGVGMTACWVLGGFNKKVPMHSV*SSEARA
Trigger: GGCCCGAGCCTCAGAGCTGCAGACGGAGTGCATGGG...CACTTTCTTGTTGAATCCTCCCAACACCCAGCACGCTGTCATCCCCACTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp TGCACACAAGGAGTGGGGATGACAGCGTGCTGGGTGTTGGGAGGATTCAACAAGGGGAGTCGCCTGCAGTaGCGGAATAGTCAGCCACGG +
Preference number: 4 (lower is better)
Translates to: CTQGVGMTACWVLGGFNKGSRLQ*RNSQPR
Trigger: CCGTGGCTGACTATTCCGGCACTGCAGGCGACTCCC...CTTGTTGAATCCTCCCAACACCCAGCACGCTGTCATCCCCACTCCTTGTGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR GCA 90 bp GGGTCCGCCAGGCACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTGGGGTAACTTGAGTGAGTACTaGCAGCCGGTCCAGGAGGAC +
Preference number: 4 (lower is better)
Translates to: GSARHRWVENIHERVRWGNLSEY*QPVQED
Trigger: GTCCTCCTGGACCGGCTGGCAGTACTCACTCAAGTT...ACCCCACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR GCA 90 bp GGGTCCGCCAGGCACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTGGGGTAAGAGATCAGTGAGCTaGCAAATGGAGGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GSARHRWVENIHERVRWGKRSVS*QMEGVG
Trigger: CCCCACCCCCTCCATTTGGCAGCTCACTGATCTCTT...ACCCCACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR GCA 90 bp AGTGGGTCCGCCAGGCACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTGGTGGGGTCGTCAAGTTTaGCAGCCCCCATCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: SGSARHRWVENIHERVRWWGRQV*QPPSAE
Trigger: CTCTGCTGATGGGGGCTGGCAAACTTGACGACCCCA...CCACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGACCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR GCA 90 bp GGTCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTTCCAGGGGTGCTGTCTaGCCCCTGCTCTCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: GHTASPTNPQWCQVKFIVSRGAV*PLLSVP
Trigger: GGGGACAGAGAGCAGGGGGCAGACAGCACCCCTGGA...AACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp CCAGCCCAGAAAACCAAGAGCTTCCCATTAGCGCAGTCCAGCCCCACGGTGCAGTGCGGGTCTCACCTCTaGATGTGTGCACACAAGGAG +
Preference number: 4 (lower is better)
Translates to: PAQKTKSFPLAQSSPTVQCGSHL*MCAHKE
Trigger: CTCCTTGTGTGCACACATGCAGAGGTGAGACCCGCA...CTGCACCGTGGGGCTGGACTGCGCTAATGGGAAGCTCTTGGTTTTCTGGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp TGCACACAAGGAGTGGGGATGACAGCGTGCTGGGTGTTGGGAGGATTCAACAAGCTGGTCCTGGGAGCCTaGGGGTCTCACCTCTGCATG +
Preference number: 4 (lower is better)
Translates to: CTQGVGMTACWVLGGFNKLVLGA*GSHLCM
Trigger: CATGCAGAGGTGAGACCCGCAGGCTCCCAGGACCAG...CTTGTTGAATCCTCCCAACACCCAGCACGCTGTCATCCCCACTCCTTGTGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp ACCGGCCCAGGGAGCTTCGTGTCAGGGATGGCCCGGCCCCTCCCTACTGGAGAGACCAACCCCCAGTGGTaGCAAGTCAAATTTATTGTT +
Preference number: 4 (lower is better)
Translates to: TGPGSFVSGMARPLPTGETNPQW*QVKFIV
Trigger: AACAATAAATTTGACTTGGCACCACTGGGGGTTGGT...CTCTCCAGTAGGGAGGGGCCGGGCCATCCCTGACACGAAGCTCCCTGGGCCGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp TCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTTTTGCAGCACCGAGGCCTaGGCGCTCTCCAGGCGTGCG +
Preference number: 4 (lower is better)
Translates to: SHGLSHQPPVVPSQIYCFCSTEA*ALSRRA
Trigger: CGCACGCCTGGAGAGCGCCCAGGCCTCGGTGCTGCA...AAAACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GTCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTTGTCGCCCACCAGCCGTaGCTGGGCCTGGTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: VTRPLPPTPSGAKSNLLFVAHQP*LGLVLC
Trigger: ACAGAGCACCAGGCCCAGCCACGGCTGGTGGGCGAC...AAACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp AGTGGGTCCGCCAGGCACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTGGCTCTCAGAGAGAAGCTaGATGAGGCGGCCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SGSARHRWVENIHERVRWLSERS*MRRPCS
Trigger: TGAGCAGGGCCGCCTCATCCAGCTTCTCTCTGAGAG...CCACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGACCCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp CACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCCCAGTTGTTCTCTGAATaGTCGCTGTCACGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: HRSHSGGRQELGSSSLPAQLFSE*SLSRSL
Trigger: CAAGGACCGTGACAGCGACCATTCAGAGAACAACTG...GGCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp GCCTCATCCCAGCCCTGCCTAGGCCCCAGCCCAGAAAACCAAGAGCTTCCCATTTCCGCCAGGCACAGGTaGGTGGAGAACATTCACGAA +
Preference number: 4 (lower is better)
Translates to: ASSQPCLGPSPENQELPISARHR*VENIHE
Trigger: TTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGA...AATGGGAAGCTCTTGGTTTTCTGGGCTGGGGCCTAGGCAGGGCTGGGATGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CCAGCCCAGAAAACCAAGAGCTTCCCATTAGCGCAGTCCAGCCCCACGGTGCAGTCCGCCAGGCACAGGTaGGTGGAGAACATTCACGAA +
Preference number: 4 (lower is better)
Translates to: PAQKTKSFPLAQSSPTVQSARHR*VENIHE
Trigger: TTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGA...CTGCACCGTGGGGCTGGACTGCGCTAATGGGAAGCTCTTGGTTTTCTGGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp TGCACACAAGGAGTGGGGATGACAGCGTGCTGGGTGTTGGGAGGATTCAACAAGCTCCCTACTGGAGAGTaGGTCCGCCAGGCACAGGTG +
Preference number: 4 (lower is better)
Translates to: CTQGVGMTACWVLGGFNKLPTGE*VRQAQV
Trigger: CACCTGTGCCTGGCGGACCCACTCTCCAGTAGGGAG...CTTGTTGAATCCTCCCAACACCCAGCACGCTGTCATCCCCACTCCTTGTGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTATAATGCCGGGTATTTaGCCGGGCAGGGCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: QTAPESQWGQAGVGVVKFIMPGI*PGRAEG
Trigger: ACCCTCTGCCCTGCCCGGCCAAATACCCGGCATTAT...AAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp ACCCTGGAGTCCCTGGGAAATTGGTGGTGGGGGTTGTACAAGCCTCATCCCAGCTGGCATTGGGAGGGCTaGAGGATACTGGCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: TLESLGNWWWGLYKPHPSWHWEG*RILASD
Trigger: GTCTGAGGCCAGTATCCTCCAGCCCTCCCAATGCCA...GCTGGGATGAGGCTTGTACAACCCCCACCACCAATTTCCCAGGGACTCCAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp AGTGGGTCCGCCAGGCACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTGGTGGCATTGGGAGGGCTaGAGGATACTGGCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: SGSARHRWVENIHERVRWWHWEG*RILASD
Trigger: GTCTGAGGCCAGTATCCTCCAGCCCTCCCAATGCCA...CCACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGACCCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp TCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTTTAGGACGGCCGGGAGCTaGGTGGGGGATGGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: SHGLSHQPPVVPSQIYCFRTAGS*VGDGLG
Trigger: GCCCAACCCATCCCCCACCCAGCTCCCGGCCGTCCT...AAAACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GGCGAGAAGGCGATGTGTGACTTCACCGGCCCAGGGAGCTTCGTGTCAGGGATGTCCCTGGGAAATTGGTaGTGGGGGTTGTACAAGCCT +
Preference number: 4 (lower is better)
Translates to: GEKAMCDFTGPGSFVSGMSLGNW*WGLYKP
Trigger: AGGCTTGTACAACCCCCACCACCAATTTCCCAGGGA...CATCCCTGACACGAAGCTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GGCCTCCAGGGAACTGGTCTCAGCCTTGGAGCGTGGGTCCCCAAAGGCAGCAGCCCCACCAACCCCCAGTaGTGCCAAGTCAAATTTATT +
Preference number: 4 (lower is better)
Translates to: GLQGTGLSLGAWVPKGSSPTNPQ*CQVKFI
Trigger: AATAAATTTGACTTGGCACCACTGGGGGTTGGTGGG...GCTGCTGCCTTTGGGGACCCACGCTCCAAGGCTGAGACCAGTTCCCTGGAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp TGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGCCCACCAACCCCCAGTaGTGCCAAGTCAAATTTATT +
Preference number: 4 (lower is better)
Translates to: WPGDGKQHRSHSGGRQELPTNPQ*CQVKFI
Trigger: AATAAATTTGACTTGGCACCACTGGGGGTTGGTGGG...CAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp TCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTTTGCCAGTGCTCCCCGGTaGGCCTGCCAAAGCCGTCTC +
Preference number: 4 (lower is better)
Translates to: SHGLSHQPPVVPSQIYCFASAPR*ACQSRL
Trigger: GAGACGGCTTTGGCAGGCTCACCGGGGAGCACTGGC...AAAACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp TGCACACAAGGAGTGGGGATGACAGCGTGCTGGGTGTTGGGAGGATTCAACAAGCACAAGGAGTGGGGATaGCAGCGTGCTGGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: CTQGVGMTACWVLGGFNKHKEWG*QRAGCW
Trigger: CCAACACCCAGCACGCTGTCATCCCCACTCCTTGTG...CTTGTTGAATCCTCCCAACACCCAGCACGCTGTCATCCCCACTCCTTGTGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp TCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTTTCCCCGGCGGCGCCTCTaGACAAACTTCCTCCCGGAC +
Preference number: 4 (lower is better)
Translates to: SHGLSHQPPVVPSQIYCFPRRRL*TNFLPD
Trigger: GTCCGGGAGGAAGTTTGTGCAGAGGCGCCGCCGGGG...AAAACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372338.9
CDS-3UTR GCA 90 bp GCCTCATCCCAGCCCTGCCTAGGCCCCAGCCCAGAAAACCAAGAGCTTCCCATTTCACCTCTGCATGTGTaGACACAAGGAGTGGGGATG +
Preference number: 4 (lower is better)
Translates to: ASSQPCLGPSPENQELPISPLHV*TQGVGM
Trigger: CATCCCCACTCCTTGTGTGCACACATGCAGAGGTGA...AATGGGAAGCTCTTGGTTTTCTGGGCTGGGGCCTAGGCAGGGCTGGGATGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp CAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTTGCGGGTCTCACCTCTaGATGTGTGCACACAAGGAG +
Preference number: 4 (lower is better)
Translates to: QTAPESQWGQAGVGVVKFCGSHL*MCAHKE
Trigger: CTCCTTGTGTGCACACATGCAGAGGTGAGACCCGCA...AAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CAAGGAGTGGGGATGACAGCGTGCTGGGTGTTGGGAGGATTCAACAAGAAAGTGGAAAGGAGGCCGAACTaGCCCCCAGATAACGCGGCC +
Preference number: 4 (lower is better)
Translates to: QGVGMTACWVLGGFNKKVERRPN*PPDNAA
Trigger: GGCCGCGTTATCTGGGGGCCAGTTCGGCCTCCTTTC...CACTTTCTTGTTGAATCCTCCCAACACCCAGCACGCTGTCATCCCCACTCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372338.9
CDS-3UTR CCA 90 bp GACCTGACCTCAGAGAGACCTGACGTTCCCCACGATCTGCTAGGAGGACTCCAGTCACACCCGCGGACTTaGATACTAAACTCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: DLTSERPDVPHDLLGGLQSHPRT*ILNSAS
Trigger: GGAGGCGGAGTTTAGTATCCAAGTCCGCGGGTGTGA...CTGGAGTCCTCCTAGCAGATCGTGGGGAACGTCAGGTCTCTCTGAGGTCAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp CTGCGGGTCTCACCTCTGCATGTGTGCACACAAGGAGTGGGGATGACAGCGTGCCCAGGCACAGGTGGGTaGAGAACATTCACGAAAGAG +
Preference number: 4 (lower is better)
Translates to: LRVSPLHVCTQGVGMTACPGTGG*RTFTKE
Trigger: CTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGG...GCACGCTGTCATCCCCACTCCTTGTGTGCACACATGCAGAGGTGAGACCCGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTTCCGCCAGGCACAGGTaGGTGGAGAACATTCACGAA +
Preference number: 4 (lower is better)
Translates to: QTAPESQWGQAGVGVVKFSARHR*VENIHE
Trigger: TTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGA...AAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GCTGGGTGGGGGATGGGTTGGGCCTCATTTGAGACAGAGAGCAGGTGGGCACAGCTGGGAAATTGGTGGTaGGGGTTGTACAAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: AGWGMGWASFETESRWAQLGNWW*GLYKPH
Trigger: ATGAGGCTTGTACAACCCCCACCACCAATTTCCCAG...CTGTGCCCACCTGCTCTCTGTCTCAAATGAGGCCCAACCCATCCCCCACCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GGGTCCGCCAGGCACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTGGGGTGAGTCCCTGGGAAATTaGTGGTGGGGGTTGTACAAG +
Preference number: 4 (lower is better)
Translates to: GSARHRWVENIHERVRWGESLGN*WWGLYK
Trigger: CTTGTACAACCCCCACCACCAATTTCCCAGGGACTC...ACCCCACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp GACCTGACCTCAGAGAGACCTGACGTTCCCCACGATCTGCTAGGAGGACTCCAGGTCAATGGCAAGGGTTaGCCTCCTCATGGAGACAGC +
Preference number: 4 (lower is better)
Translates to: DLTSERPDVPHDLLGGLQVNGKG*PPHGDS
Trigger: GCTGTCTCCATGAGGAGGCCAACCCTTGCCATTGAC...CTGGAGTCCTCCTAGCAGATCGTGGGGAACGTCAGGTCTCTCTGAGGTCAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GTCCGCCAGGCACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTGGGGTCGAAGCACAAACTTCAGTaGGAGGGGAAGGGAGAACGG +
Preference number: 4 (lower is better)
Translates to: VRQAQVGGEHSRKSEVGSKHKLQ*EGKGER
Trigger: CCGTTCTCCCTTCCCCTCCCACTGAAGTTTGTGCTT...CGACCCCACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp AACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCACACAGCATGTCAGTaGGTGAGACAAACCTGGCCA +
Preference number: 4 (lower is better)
Translates to: NSTGVTVGAGRSWGRQVCHTACQ*VRQTWP
Trigger: TGGCCAGGTTTGTCTCACCCACTGACATGCTGTGTG...GCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372337.6
CDS-3UTR TCA 90 bp TGCACACAAGGAGTGGGGATGACAGCGTGCTGGGTGTTGGGAGGATTCAACAAGGACCTCAGAGAGACCTaGCGTTCCCCACGATCTGCT +
Preference number: 4 (lower is better)
Translates to: CTQGVGMTACWVLGGFNKDLRET*RSPRSA
Trigger: AGCAGATCGTGGGGAACGTCAGGTCTCTCTGAGGTC...CTTGTTGAATCCTCCCAACACCCAGCACGCTGTCATCCCCACTCCTTGTGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR TCA 90 bp TGCACACAAGGAGTGGGGATGACAGCGTGCTGGGTGTTGGGAGGATTCAACAAGTACTGGCCTCAGACCTaGCCTCAGAGAGACCTGACG +
Preference number: 4 (lower is better)
Translates to: CTQGVGMTACWVLGGFNKYWPQT*PQRDLT
Trigger: CGTCAGGTCTCTCTGAGGTCAGGTCTGAGGCCAGTA...CTTGTTGAATCCTCCCAACACCCAGCACGCTGTCATCCCCACTCCTTGTGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp TGCACACAAGGAGTGGGGATGACAGCGTGCTGGGTGTTGGGAGGATTCAACAAGATGAGGATGCTGAGGTaGGAGCTGTCCGCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: CTQGVGMTACWVLGGFNKMRMLR*ELSALS
Trigger: GGAAAGGGCGGACAGCTCGCACCTCAGCATCCTCAT...CTTGTTGAATCCTCCCAACACCCAGCACGCTGTCATCCCCACTCCTTGTGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GTCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTTGCAGGAGAAATGGGATaGCAGCCCCAGCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: VTRPLPPTPSGAKSNLLFAGEMG*QPQLPQ
Trigger: CTGGGGCAGCTGGGGCTGCCATCCCATTTCTCCTGC...AAACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CCAGCCCAGAAAACCAAGAGCTTCCCATTAGCGCAGTCCAGCCCCACGGTGCAGCTGGGAAATTGGTGGTaGGGGTTGTACAAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: PAQKTKSFPLAQSSPTVQLGNWW*GLYKPH
Trigger: ATGAGGCTTGTACAACCCCCACCACCAATTTCCCAG...CTGCACCGTGGGGCTGGACTGCGCTAATGGGAAGCTCTTGGTTTTCTGGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp TGCACACAAGGAGTGGGGATGACAGCGTGCTGGGTGTTGGGAGGATTCAACAAGCGCATGTGGATGACCTaGTGGCACTGGGACAGAGAG +
Preference number: 4 (lower is better)
Translates to: CTQGVGMTACWVLGGFNKRMWMT*WHWDRE
Trigger: CTCTCTGTCCCAGTGCCACCAGGTCATCCACATGCG...CTTGTTGAATCCTCCCAACACCCAGCACGCTGTCATCCCCACTCCTTGTGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp CCAGCCCAGAAAACCAAGAGCTTCCCATTAGCGCAGTCCAGCCCCACGGTGCAGGTCTCGGACTCTCTTTaGTTTTTATTGCTCCCCTCG +
Preference number: 4 (lower is better)
Translates to: PAQKTKSFPLAQSSPTVQVSDSL*FLLLPS
Trigger: CGAGGGGAGCAATAAAAAGCAAAGAGAGTCCGAGAC...CTGCACCGTGGGGCTGGACTGCGCTAATGGGAAGCTCTTGGTTTTCTGGGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000372338.9
CDS-3UTR GCA 90 bp GTCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTTCACCCCCTAGGCACCTaGCATCGGGTGTCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: VTRPLPPTPSGAKSNLLFHPLGT*HRVSFG
Trigger: TCCAAAGGACACCCGATGGCAGGTGCCTAGGGGGTG...AAACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GTCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTTGAGAGGTGGGTTCTCTaGGCACCAGGGAAACGGGGT +
Preference number: 4 (lower is better)
Translates to: VTRPLPPTPSGAKSNLLFERWVL*APGKRG
Trigger: ACCCCGTTTCCCTGGTGCCCAGAGAACCCACCTCTC...AAACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp GGTCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTAACTGGTCTCAGCCTTaGAGCGTGGGTCCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: GHTASPTNPQWCQVKFIVNWSQP*SVGPQR
Trigger: CCTTTGGGGACCCACGCTCCAAGGCTGAGACCAGTT...AACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CAAGGAGTGGGGATGACAGCGTGCTGGGTGTTGGGAGGATTCAACAAGAAAGTGAAGAAAGTGTCCAGGTaGTGCCTGGTCTGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: QGVGMTACWVLGGFNKKVKKVSR*CLVWCP
Trigger: GGGGCACCAGACCAGGCACCACCTGGACACTTTCTT...CACTTTCTTGTTGAATCCTCCCAACACCCAGCACGCTGTCATCCCCACTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CCA 90 bp CAGAGGCAAGAGATCAGTGAGCTGCCAAATGGAGGGGGTGGGGACGGCGAGAAGCCCACCAACCCCCAGTaGTGCCAAGTCAAATTTATT +
Preference number: 4 (lower is better)
Translates to: QRQEISELPNGGGGDGEKPTNPQ*CQVKFI
Trigger: AATAAATTTGACTTGGCACCACTGGGGGTTGGTGGG...CTTCTCGCCGTCCCCACCCCCTCCATTTGGCAGCTCACTGATCTCTTGCCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
3UTR CAA 72 bp TGCACACAAGGAGTGGGGATGACAGCGTGCTGGGTGTaGGGAGGATTCAACAAGAAAGTGTCCAGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: CTQGVGMTACWV*GGFNKKVSRWC
Trigger: GCACCACCTGGACACTTTCTTGTTGAATCCTCCCAACACCCAGCACGCTGTCATCCCCACTCCTTGTGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp GGTCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTAACTTGAGTGAGTACTaGCAGCCGGTCCAGGAGGAC +
Preference number: 4 (lower is better)
Translates to: GHTASPTNPQWCQVKFIVNLSEY*QPVQED
Trigger: GTCCTCCTGGACCGGCTGGCAGTACTCACTCAAGTT...AACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp TCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTTTGGTGGGGGTTGGCATTaGGAGGGCTGGAGGATACTG +
Preference number: 4 (lower is better)
Translates to: SHGLSHQPPVVPSQIYCFGGGWH*EGWRIL
Trigger: CAGTATCCTCCAGCCCTCCCAATGCCAACCCCCACC...AAAACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp TCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTTTTGGGGTCGTCAAGTTTaGCAGCCCCCATCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: SHGLSHQPPVVPSQIYCFWGRQV*QPPSAE
Trigger: CTCTGCTGATGGGGGCTGGCAAACTTGACGACCCCA...AAAACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp GTCCGCCAGGCACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTGGGGTCGACCAACCCCCAGTGGTaGCAAGTCAAATTTATTGTT +
Preference number: 4 (lower is better)
Translates to: VRQAQVGGEHSRKSEVGSTNPQW*QVKFIV
Trigger: AACAATAAATTTGACTTGGCACCACTGGGGGTTGGT...CGACCCCACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp GTCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTTTTGAGGTTGGACGTGTaGCAGTTGCGGTACCACCAG +
Preference number: 4 (lower is better)
Translates to: VTRPLPPTPSGAKSNLLFLRLDV*QLRYHQ
Trigger: CTGGTGGTACCGCAACTGCCACACGTCCAACCTCAA...AAACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CCA 90 bp TCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTTTATGACCTGGTGGCACTaGGACAGAGAGCCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: SHGLSHQPPVVPSQIYCFMTWWH*DREPGH
Trigger: GTGACCTGGCTCTCTGTCCCAGTGCCACCAGGTCAT...AAAACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR GCA 90 bp CAAGGAGTGGGGATGACAGCGTGCTGGGTGTTGGGAGGATTCAACAAGAAAGTGACCAACCCCCAGTGGTaGCAAGTCAAATTTATTGTT +
Preference number: 4 (lower is better)
Translates to: QGVGMTACWVLGGFNKKVTNPQW*QVKFIV
Trigger: AACAATAAATTTGACTTGGCACCACTGGGGGTTGGT...CACTTTCTTGTTGAATCCTCCCAACACCCAGCACGCTGTCATCCCCACTCCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS CCA 90 bp CCGCCCATGGTCTTCCACCGGTCGTTGACCATCTTCCGGCAGGACTaGCGGGGGCGCCGGGCGAGGCGCGCCGACACACGCGCGCGCTCA +
Preference number: 5 (lower is better)
Translates to: PPMVFHRSLTIFRQD*RGRRARRADTRARS
Trigger: TGAGCGCGCGCGTGTGTCGGCGCGCCTCGCCCGGCGCCCCCGCCAGTCCTGCCGGAAGATGGTCAACGACCGGTGGAAGACCATGGGCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000448616.5
ENST00000451466.1
ENST00000486250.5
CDS TCA 90 bp GGTCCTCAAGTTGGGCAGCGCCGCCCATGGTCTTCCACCGGTCGTTaGCCATCTTCCGGCAGGACTGGCGGGGGCGCCGGGCGAGGCGCG +
Preference number: 5 (lower is better)
Translates to: GPQVGQRRPWSSTGR*PSSGRTGGGAGRGA
Trigger: CGCGCCTCGCCCGGCGCCCCCGCCAGTCCTGCCGGAAGATGGTCAACGACCGGTGGAAGACCATGGGCGGCGCTGCCCAACTTGAGGACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000372338.9
ENST00000448616.5
ENST00000451466.1
ENST00000463475.1
ENST00000486250.5
CDS GCA 90 bp TGGTCGCCCACCAGCCGTGGCTGGGCCTGGTGCTCTGTCAGCGCCTaGAGCACCGAGGCCTGGGCGCTCTCCAGGCGTGCGAAGCTGTCG +
Preference number: 5 (lower is better)
Translates to: WSPTSRGWAWCSVSA*STEAWALSRRAKLS
Trigger: CGACAGCTTCGCACGCCTGGAGAGCGCCCAGGCCTCGGTGCTGCAGGCGCTGACAGAGCACCAGGCCCAGCCACGGCTGGTGGGCGACCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
ENST00000451466.1
CDS GCA 90 bp AGCAGCTCCTGCTCCTGGTCGCCCACCAGCCGTGGCTGGGCCTGGTaGTCTGTCAGCGCCTGCAGCACCGAGGCCTGGGCGCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: SSSCSWSPTSRGWAW*SVSACSTEAWALSR
Trigger: CCTGGAGAGCGCCCAGGCCTCGGTGCTGCAGGCGCTGACAGAGCACCAGGCCCAGCCACGGCTGGTGGGCGACCAGGAGCAGGAGCTGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
ENST00000451466.1
CDS CCA 90 bp CGTGGCTGGGCCTGGTGCTCTGTCAGCGCCTGCAGCACCGAGGCCTaGGCGCTCTCCAGGCGTGCGAAGCTGTCGGTGAGGTCGGGGCAG +
Preference number: 5 (lower is better)
Translates to: RGWAWCSVSACSTEA*ALSRRAKLSVRSGQ
Trigger: CTGCCCCGACCTCACCGACAGCTTCGCACGCCTGGAGAGCGCCCAGGCCTCGGTGCTGCAGGCGCTGACAGAGCACCAGGCCCAGCCACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
ENST00000451466.1
CDS CCA 90 bp AGCGTGTCCAGCAGCTCCTGCTCCTGGTCGCCCACCAGCCGTGGCTaGGCCTGGTGCTCTGTCAGCGCCTGCAGCACCGAGGCCTGGGCG +
Preference number: 5 (lower is better)
Translates to: SVSSSSCSWSPTSRG*AWCSVSACSTEAWA
Trigger: CGCCCAGGCCTCGGTGCTGCAGGCGCTGACAGAGCACCAGGCCCAGCCACGGCTGGTGGGCGACCAGGAGCAGGAGCTGCTGGACACGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
ENST00000451466.1
CDS CCA 90 bp CCGCCCATGGTCTTCCACCGGTCGTTGACCATCTTCCGGCAGGACTaGCGGGGGCGCCGGGCGAGGCGCGCCGACAAGTCACCATGCGCG +
Preference number: 5 (lower is better)
Translates to: PPMVFHRSLTIFRQD*RGRRARRADKSPCA
Trigger: CGCGCATGGTGACTTGTCGGCGCGCCTCGCCCGGCGCCCCCGCCAGTCCTGCCGGAAGATGGTCAACGACCGGTGGAAGACCATGGGCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463475.1
CDS TCA 90 bp CCGTGCCCGGCGCGTGGGCGTGGTTCAGGAAGAGCACGGCACCGGTaGCAGCTACAGCCAGCAGCACAGCCAGGGCCAGCAGCACGGTGC +
Preference number: 5 (lower is better)
Translates to: PCPARGRGSGRARHR*QLQPAAQPGPAARC
Trigger: GCACCGTGCTGCTGGCCCTGGCTGTGCTGCTGGCTGTAGCTGTCACCGGTGCCGTGCTCTTCCTGAACCACGCCCACGCGCCGGGCACGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
ENST00000451466.1
CDS CCA 90 bp CCGCAGCTCGGCCGCTGCGGCTTGTCGCGCGGCCGGTCCTCAAGTTaGGCAGCGCCGCCCATGGTCTTCCACCGGTCGTTGACCATCTTC +
Preference number: 5 (lower is better)
Translates to: PQLGRCGLSRGRSSS*AAPPMVFHRSLTIF
Trigger: GAAGATGGTCAACGACCGGTGGAAGACCATGGGCGGCGCTGCCCAACTTGAGGACCGGCCGCGCGACAAGCCGCAGCGGCCGAGCTGCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000448616.5
ENST00000451466.1
CDS GCA 90 bp CTCTGTCAGCGCCTGCAGCACCGAGGCCTGGGCGCTCTCCAGGCGTaGGAAGCTGTCGGTGAGGTCGGGGCAGCGCGGGTCAATGAGGAT +
Preference number: 5 (lower is better)
Translates to: LCQRLQHRGLGALQA*EAVGEVGAARVNED
Trigger: ATCCTCATTGACCCGCGCTGCCCCGACCTCACCGACAGCTTCGCACGCCTGGAGAGCGCCCAGGCCTCGGTGCTGCAGGCGCTGACAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
ENST00000451466.1
CDS-3UTR CAA 90 bp GGCCTCCAGGGAACTGGTCTCAGCCTTGGAGCGTGGGTCCCCAAAGGCAGCAGCCGGCCGGTCCTCAAGTaGGGCAGCGCCGCCCATGGT +
Preference number: 5 (lower is better)
Translates to: GLQGTGLSLGAWVPKGSSRPVLK*GSAAHG
Trigger: ACCATGGGCGGCGCTGCCCAACTTGAGGACCGGCCG...GCTGCTGCCTTTGGGGACCCACGCTCCAAGGCTGAGACCAGTTCCCTGGAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CAA 90 bp GCTGGGTGGGGGATGGGTTGGGCCTCATTTGAGACAGAGAGCAGGTGGGCACAGCTCGGCCGCTGCGGCTaGTCGCGCGGCCGGTCCTCA +
Preference number: 5 (lower is better)
Translates to: AGWGMGWASFETESRWAQLGRCG*SRGRSS
Trigger: TGAGGACCGGCCGCGCGACAAGCCGCAGCGGCCGAG...CTGTGCCCACCTGCTCTCTGTCTCAAATGAGGCCCAACCCATCCCCCACCCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CAA 90 bp CTGCCCCAGGTAGGAGGACGGCCGGGAGCTGGGTGGGGGATGGGTTGGGCCTCACCCCATCAGGAGGCCTaGGAAAAGCCGCCCTGCATC +
Preference number: 5 (lower is better)
Translates to: LPQVGGRPGAGWGMGWASPHQEA*EKPPCI
Trigger: GATGCAGGGCGGCTTTTCCAAGGCCTCCTGATGGGG...TGAGGCCCAACCCATCCCCCACCCAGCTCCCGGCCGTCCTCCTACCTGGGGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS TCA 90 bp GCCGGCCCAGCCCCCGGTCCCTCTGCAGGGCATCCAGGATGTCGCTaGCGGAGTTCACCAGGTGAGCCATGTGGCCCTGGCTCTCAGAGA +
Preference number: 5 (lower is better)
Translates to: AGPAPGPSAGHPGCR*RSSPGEPCGPGSQR
Trigger: TCTCTGAGAGCCAGGGCCACATGGCTCACCTGGTGAACTCCGTCAGCGACATCCTGGATGCCCTGCAGAGGGACCGGGGGCTGGGCCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
ENST00000451466.1
CDS GCA 90 bp GGGTCGGGGATGGGGCGACAGGGACCAGCAGGGCCAAGGACAAGGTaGACCAGTCTAGCGGTCCTCCCGGACCGGCCGGATCTTCATCTC +
Preference number: 5 (lower is better)
Translates to: GSGMGRQGPAGPRTR*TSLAVLPDRPDLHL
Trigger: GAGATGAAGATCCGGCCGGTCCGGGAGGACCGCTAGACTGGTGCACCTTGTCCTTGGCCCTGCTGGTCCCTGTCGCCCCATCCCCGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CAA 90 bp GGCCCAGGGAGCTTCGTGTCAGGGATGGCCCGGCCCCTCCCTACTGGAGAGTGGGCCATCGGGTGTCCTTaGGAGGAAGCCACCTCCCCT +
Preference number: 5 (lower is better)
Translates to: GPGSFVSGMARPLPTGEWAIGCP*EEATSP
Trigger: AGGGGAGGTGGCTTCCTCCAAAGGACACCCGATGGC...CCACTCTCCAGTAGGGAGGGGCCGGGCCATCCCTGACACGAAGCTCCCTGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS GCA 90 bp CTGTCGGTGAGGTCGGGGCAGCGCGGGTCAATGAGGATGCTGAGGTaGGAGCTGTCCGCCCTTTCCACAGTGACCAGGGCGCTGTTGGCG +
Preference number: 5 (lower is better)
Translates to: LSVRSGQRGSMRMLR*ELSALSTVTRALLA
Trigger: CGCCAACAGCGCCCTGGTCACTGTGGAAAGGGCGGACAGCTCGCACCTCAGCATCCTCATTGACCCGCGCTGCCCCGACCTCACCGACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
ENST00000451466.1
CDS-3UTR CAA 90 bp CCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTCATAATGCCGGGTATTaGGCCGGGCAGGGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: PGQGTANSTGVTVGAGRSHNAGY*AGQGRG
Trigger: CCCTCTGCCCTGCCCGGCCAAATACCCGGCATTATG...ACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CAA 90 bp CCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTCCCCATCAGGAGGCCTaGGAAAAGCCGCCCTGCATC +
Preference number: 5 (lower is better)
Translates to: PGQGTANSTGVTVGAGRSPHQEA*EKPPCI
Trigger: GATGCAGGGCGGCTTTTCCAAGGCCTCCTGATGGGG...ACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS TCA 90 bp GCGGTCCTCCCGGACCGGCCGGATCTTCATCTCAGAGAACTTGAGTaGGTACTGCCAGCCGGTCCAGGAGGACCACTCCACGCCGTCGGC +
Preference number: 5 (lower is better)
Translates to: AVLPDRPDLHLRELE*VLPAGPGGPLHAVG
Trigger: GCCGACGGCGTGGAGTGGTCCTCCTGGACCGGCTGGCAGTACTCACTCAAGTTCTCTGAGATGAAGATCCGGCCGGTCCGGGAGGACCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS TCA 90 bp CGTAGCCGCAGCTCGGCCGCCAGGGCCACACAGCATGTCAGTGGGTaGGACAAACCTGGCCACAAGGGAGGAGAGAAGGCTGGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: RSRSSAARATQHVSG*DKPGHKGGEKAGPG
Trigger: TCCTGGGCCAGCCTTCTCTCCTCCCTTGTGGCCAGGTTTGTCTCACCCACTGACATGCTGTGTGGCCCTGGCGGCCGAGCTGCGGCTACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372337.6
CDS-3UTR CAA 90 bp GCCTCATCCCAGCCCTGCCTAGGCCCCAGCCCAGAAAACCAAGAGCTTCCCATTCGGCCGGTCCTCAAGTaGGGCAGCGCCGCCCATGGT +
Preference number: 5 (lower is better)
Translates to: ASSQPCLGPSPENQELPIRPVLK*GSAAHG
Trigger: ACCATGGGCGGCGCTGCCCAACTTGAGGACCGGCCG...AATGGGAAGCTCTTGGTTTTCTGGGCTGGGGCCTAGGCAGGGCTGGGATGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CAA 90 bp CCAGGGAGCTTCGTGTCAGGGATGGCCCGGCCCCTCCCTACTGGAGAGTGGGTCTCGCTGTCACGGTCCTaGGTGGTGAACCTCATGCCG +
Preference number: 5 (lower is better)
Translates to: PGSFVSGMARPLPTGEWVSLSRS*VVNLMP
Trigger: CGGCATGAGGTTCACCACCAAGGACCGTGACAGCGA...GACCCACTCTCCAGTAGGGAGGGGCCGGGCCATCCCTGACACGAAGCTCCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CAA 90 bp GACTCCACCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGGGGGGCAGGCAGGAGTaGGGGTCGTCAAGTTTGCCA +
Preference number: 5 (lower is better)
Translates to: DSTILARGRQTAPESQWGGGRQE*GSSSLP
Trigger: TGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCC...CCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGGTGGAGTC
66% GC, longest homopolymer 10 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CAA 90 bp ACTCCACCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCCATAATGCCGGGTATTaGGCCGGGCAGGGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: TPPSWPGDGKQHRSHSGGHNAGY*AGQGRG
Trigger: CCCTCTGCCCTGCCCGGCCAAATACCCGGCATTATG...GCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGGTGGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CAA 90 bp GGAGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCGAACTGGTCTCAGCCTaGGAGCGTGGGTCCCCAAAG +
Preference number: 5 (lower is better)
Translates to: GDSHLREGVITPKALLGGELVSA*ERGSPK
Trigger: CTTTGGGGACCCACGCTCCAAGGCTGAGACCAGTTC...GCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CAA 90 bp CCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAACTGGTCTCAGCCTaGGAGCGTGGGTCCCCAAAG +
Preference number: 5 (lower is better)
Translates to: PSWPGDGKQHRSHSGGRQELVSA*ERGSPK
Trigger: CTTTGGGGACCCACGCTCCAAGGCTGAGACCAGTTC...CTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CAA 90 bp ACCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGCCATCGGGTGTCCTTaGGAGGAAGCCACCTCCCCT +
Preference number: 5 (lower is better)
Translates to: TILARGRQTAPESQWGQAAIGCP*EEATSP
Trigger: AGGGGAGGTGGCTTCCTCCAAAGGACACCCGATGGC...TGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CAA 90 bp CCTGCTCTCTGTCCCCATAATGCCGGGTATTTGGCCGGGCAGGGCAGAGGGTGCAGGGCGTGGATCCTCTaGAGCCCTAGCCAGTGCTCC +
Preference number: 5 (lower is better)
Translates to: PALCPHNAGYLAGQGRGCRAWIL*SPSQCS
Trigger: GGAGCACTGGCTAGGGCTCAAGAGGATCCACGCCCT...GCACCCTCTGCCCTGCCCGGCCAAATACCCGGCATTATGGGGACAGAGAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CAA 90 bp ACTCCACCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCTCGCTGTCACGGTCCTaGGTGGTGAACCTCATGCCG +
Preference number: 5 (lower is better)
Translates to: TPPSWPGDGKQHRSHSGGSLSRS*VVNLMP
Trigger: CGGCATGAGGTTCACCACCAAGGACCGTGACAGCGA...GCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGGTGGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CAA 90 bp ACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCCCGGGGGCAGGCAGGAGTaGGGGTCGTCAAGTTTGCCA +
Preference number: 5 (lower is better)
Translates to: TGVTVGAGRSWGRQVCQPGGRQE*GSSSLP
Trigger: TGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCC...GGGCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CAA 90 bp CCTGCTCTCTGTCCCCATAATGCCGGGTATTTGGCCGGGCAGGGCAGAGGGTGCGGGGGCAGGCAGGAGTaGGGGTCGTCAAGTTTGCCA +
Preference number: 5 (lower is better)
Translates to: PALCPHNAGYLAGQGRGCGGRQE*GSSSLP
Trigger: TGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCC...GCACCCTCTGCCCTGCCCGGCCAAATACCCGGCATTATGGGGACAGAGAGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CAA 90 bp GGAACCCCACACCCCCTAGGCACCTGCCATCGGGTGTCCTTTGGAGGAAGCCACCATAATGCCGGGTATTaGGCCGGGCAGGGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: GTPHPLGTCHRVSFGGSHHNAGY*AGQGRG
Trigger: CCCTCTGCCCTGCCCGGCCAAATACCCGGCATTATG...GTGGCTTCCTCCAAAGGACACCCGATGGCAGGTGCCTAGGGGGTGTGGGGTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS TCA 90 bp GCTTCAGGAGGGAGTCGCCTGCAGTGCCGGAATAGTCAGCCACGGTaGGCGGGTACCCGTCTTCCTCAGGGTCCACGGAGAACAAGCCCA +
Preference number: 5 (lower is better)
Translates to: ASGGSRLQCRNSQPR*AGTRLPQGPRRTSP
Trigger: TGGGCTTGTTCTCCGTGGACCCTGAGGAAGACGGGTACCCGCTCACCGTGGCTGACTATTCCGGCACTGCAGGCGACTCCCTCCTGAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CAA 90 bp TGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGCTCACACCCGCGGACTaGGATACTAAACTCCGCCTC +
Preference number: 5 (lower is better)
Translates to: WPGDGKQHRSHSGGRQELLTPAD*DTKLRL
Trigger: GAGGCGGAGTTTAGTATCCAAGTCCGCGGGTGTGAG...CAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CAA 90 bp ACTCCACCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCCTCACACCCGCGGACTaGGATACTAAACTCCGCCTC +
Preference number: 5 (lower is better)
Translates to: TPPSWPGDGKQHRSHSGGLTPAD*DTKLRL
Trigger: GAGGCGGAGTTTAGTATCCAAGTCCGCGGGTGTGAG...GCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGGTGGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CAA 90 bp GAACTGGTCTCAGCCTTGGAGCGTGGGTCCCCAAAGGCAGCAGCTCCCCATCCTTTGGACGTGTGGCAGTaGCGGTACCACCAGGCACCG +
Preference number: 5 (lower is better)
Translates to: ELVSALERGSPKAAAPHPLDVWQ*RYHQAP
Trigger: CGGTGCCTGGTGGTACCGCAACTGCCACACGTCCAA...AGGATGGGGAGCTGCTGCCTTTGGGGACCCACGCTCCAAGGCTGAGACCAGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CAA 90 bp GACTCCACCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGTTGGGGTCGTCAAGTTaGCCAGCCCCCATCAGCAGA +
Preference number: 5 (lower is better)
Translates to: DSTILARGRQTAPESQWGLGSSS*PAPISR
Trigger: TCTGCTGATGGGGGCTGGCAAACTTGACGACCCCAA...CCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGGTGGAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS TCA 90 bp TCCCTCTGCAGGGCATCCAGGATGTCGCTGACGGAGTTCACCAGGTaGGCCATGTGGCCCTGGCTCTCAGAGAGAAGCTGGATGAGGCGG +
Preference number: 5 (lower is better)
Translates to: SLCRASRMSLTEFTR*AMWPWLSERSWMRR
Trigger: CCGCCTCATCCAGCTTCTCTCTGAGAGCCAGGGCCACATGGCTCACCTGGTGAACTCCGTCAGCGACATCCTGGATGCCCTGCAGAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
ENST00000451466.1
CDS TCA 90 bp TCTAGCGGTCCTCCCGGACCGGCCGGATCTTCATCTCAGAGAACTTaGGTGAGTACTGCCAGCCGGTCCAGGAGGACCACTCCACGCCGT +
Preference number: 5 (lower is better)
Translates to: SSGPPGPAGSSSQRT*VSTASRSRRTTPRR
Trigger: ACGGCGTGGAGTGGTCCTCCTGGACCGGCTGGCAGTACTCACTCAAGTTCTCTGAGATGAAGATCCGGCCGGTCCGGGAGGACCGCTAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS CCA 90 bp AGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTGGGGTCGGGGATaGGGCGACAGGGACCAGCAGGGCCAAGGACAAGGTGCACCAGTC +
Preference number: 5 (lower is better)
Translates to: RWVENIHERVRWGRG*GDRDQQGQGQGAPV
Trigger: GACTGGTGCACCTTGTCCTTGGCCCTGCTGGTCCCTGTCGCCCCATCCCCGACCCCACCTCACTCTTTCGTGAATGTTCTCCACCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CAA 90 bp GTCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTTCTCGGCCGCTGCGGCTaGTCGCGCGGCCGGTCCTCA +
Preference number: 5 (lower is better)
Translates to: VTRPLPPTPSGAKSNLLFLGRCG*SRGRSS
Trigger: TGAGGACCGGCCGCGCGACAAGCCGCAGCGGCCGAG...AAACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CAA 90 bp CCAGCCCAGAAAACCAAGAGCTTCCCATTAGCGCAGTCCAGCCCCACGGTGCAGAGGGCGTGGATCCTCTaGAGCCCTAGCCAGTGCTCC +
Preference number: 5 (lower is better)
Translates to: PAQKTKSFPLAQSSPTVQRAWIL*SPSQCS
Trigger: GGAGCACTGGCTAGGGCTCAAGAGGATCCACGCCCT...CTGCACCGTGGGGCTGGACTGCGCTAATGGGAAGCTCTTGGTTTTCTGGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CAA 90 bp CAGAGGCAAGAGATCAGTGAGCTGCCAAATGGAGGGGGTGGGGACGGCGAGAAGTTGGACGTGTGGCAGTaGCGGTACCACCAGGCACCG +
Preference number: 5 (lower is better)
Translates to: QRQEISELPNGGGGDGEKLDVWQ*RYHQAP
Trigger: CGGTGCCTGGTGGTACCGCAACTGCCACACGTCCAA...CTTCTCGCCGTCCCCACCCCCTCCATTTGGCAGCTCACTGATCTCTTGCCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CAA 90 bp GGGTCCGCCAGGCACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTGGGGTTTGGACGTGTGGCAGTaGCGGTACCACCAGGCACCG +
Preference number: 5 (lower is better)
Translates to: GSARHRWVENIHERVRWGLDVWQ*RYHQAP
Trigger: CGGTGCCTGGTGGTACCGCAACTGCCACACGTCCAA...ACCCCACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CAA 90 bp CACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCCTTGGGGTCGTCAAGTTaGCCAGCCCCCATCAGCAGA +
Preference number: 5 (lower is better)
Translates to: HRSHSGGRQELGSSSLPALGSSS*PAPISR
Trigger: TCTGCTGATGGGGGCTGGCAAACTTGACGACCCCAA...GGCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CAA 90 bp GGAACCCCACACCCCCTAGGCACCTGCCATCGGGTGTCCTTTGGAGGAAGCCACTTGGGGTCGTCAAGTTaGCCAGCCCCCATCAGCAGA +
Preference number: 5 (lower is better)
Translates to: GTPHPLGTCHRVSFGGSHLGSSS*PAPISR
Trigger: TCTGCTGATGGGGGCTGGCAAACTTGACGACCCCAA...GTGGCTTCCTCCAAAGGACACCCGATGGCAGGTGCCTAGGGGGTGTGGGGTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CAA 90 bp AACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCCCCATCAGGAGGCCTaGGAAAAGCCGCCCTGCATC +
Preference number: 5 (lower is better)
Translates to: NSTGVTVGAGRSWGRQVCPHQEA*EKPPCI
Trigger: GATGCAGGGCGGCTTTTCCAAGGCCTCCTGATGGGG...GCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CAA 90 bp GCCTCATCCCAGCCCTGCCTAGGCCCCAGCCCAGAAAACCAAGAGCTTCCCATTGCCATCGGGTGTCCTTaGGAGGAAGCCACCTCCCCT +
Preference number: 5 (lower is better)
Translates to: ASSQPCLGPSPENQELPIAIGCP*EEATSP
Trigger: AGGGGAGGTGGCTTCCTCCAAAGGACACCCGATGGC...AATGGGAAGCTCTTGGTTTTCTGGGCTGGGGCCTAGGCAGGGCTGGGATGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS TCA 90 bp GCGGTACCACCAGGCACCGCGGTAGAAGGCGGCACAGTTGTTCTCTaGATGGTCGCTGTCACGGTCCTTGGTGGTGAACCTCATGCCGCT +
Preference number: 5 (lower is better)
Translates to: AVPPGTAVEGGTVVL*MVAVTVLGGEPHAA
Trigger: AGCGGCATGAGGTTCACCACCAAGGACCGTGACAGCGACCATTCAGAGAACAACTGTGCCGCCTTCTACCGCGGTGCCTGGTGGTACCGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS CCA 90 bp CCGTGCGCATGTCACAGTACACCTGGAAGCCGGCCGGGTAGTGGGTaGGAAAGACAGAGTAGACGCCATCGTCCTGCTGTCCGCTTAGGA +
Preference number: 5 (lower is better)
Translates to: PCACHSTPGSRPGSG*ERQSRRHRPAVRLG
Trigger: TCCTAAGCGGACAGCAGGACGATGGCGTCTACTCTGTCTTTCCCACCCACTACCCGGCCGGCTTCCAGGTGTACTGTGACATGCGCACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
ENST00000451466.1
CDS-3UTR CAA 90 bp CAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTAGGGCGTGGATCCTCTaGAGCCCTAGCCAGTGCTCC +
Preference number: 5 (lower is better)
Translates to: QTAPESQWGQAGVGVVKFRAWIL*SPSQCS
Trigger: GGAGCACTGGCTAGGGCTCAAGAGGATCCACGCCCT...AAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CAA 90 bp CAGAGGCAAGAGATCAGTGAGCTGCCAAATGGAGGGGGTGGGGACGGCGAGAAGCGCAGGTACTGCCCATaGAGGTTGGACGTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: QRQEISELPNGGGGDGEKRRYCP*RLDVWQ
Trigger: CTGCCACACGTCCAACCTCAATGGGCAGTACCTGCG...CTTCTCGCCGTCCCCACCCCCTCCATTTGGCAGCTCACTGATCTCTTGCCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CAA 90 bp CCAGCCCAGAAAACCAAGAGCTTCCCATTAGCGCAGTCCAGCCCCACGGTGCAGCGCAGGTACTGCCCATaGAGGTTGGACGTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: PAQKTKSFPLAQSSPTVQRRYCP*RLDVWQ
Trigger: CTGCCACACGTCCAACCTCAATGGGCAGTACCTGCG...CTGCACCGTGGGGCTGGACTGCGCTAATGGGAAGCTCTTGGTTTTCTGGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CAA 90 bp GGAGACAGCCACCTCAGGGAAGGGGTCATCACCCCCAAGGCCCTCCTGGGAGGCTTCATCTCAGAGAACTaGAGTGAGTACTGCCAGCCG +
Preference number: 5 (lower is better)
Translates to: GDSHLREGVITPKALLGGFISEN*SEYCQP
Trigger: CGGCTGGCAGTACTCACTCAAGTTCTCTGAGATGAA...GCCTCCCAGGAGGGCCTTGGGGGTGATGACCCCTTCCCTGAGGTGGCTGTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CAA 90 bp GCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCAATTGGTGGTGGGGGTaGTACAAGCCTCATCCCAGC +
Preference number: 5 (lower is better)
Translates to: APESQWGQAGVGVVKFASNWWWG*YKPHPS
Trigger: GCTGGGATGAGGCTTGTACAACCCCCACCACCAATT...GCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CAA 90 bp GGAACCCCACACCCCCTAGGCACCTGCCATCGGGTGTCCTTTGGAGGAAGCCACGGAGTCCCTGGGAAATaGGTGGTGGGGGTTGTACAA +
Preference number: 5 (lower is better)
Translates to: GTPHPLGTCHRVSFGGSHGVPGK*VVGVVQ
Trigger: TTGTACAACCCCCACCACCAATTTCCCAGGGACTCC...GTGGCTTCCTCCAAAGGACACCCGATGGCAGGTGCCTAGGGGGTGTGGGGTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CAA 90 bp GCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCGGAGTCCCTGGGAAATaGGTGGTGGGGGTTGTACAA +
Preference number: 5 (lower is better)
Translates to: APESQWGQAGVGVVKFASGVPGK*VVGVVQ
Trigger: TTGTACAACCCCCACCACCAATTTCCCAGGGACTCC...GCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CAA 90 bp CCAGGGAGCTTCGTGTCAGGGATGGCCCGGCCCCTCCCTACTGGAGAGTGGGTCACAGCGTGCTGGGTGTaGGGAGGATTCAACAAGAAA +
Preference number: 5 (lower is better)
Translates to: PGSFVSGMARPLPTGEWVTACWV*GGFNKK
Trigger: TTTCTTGTTGAATCCTCCCAACACCCAGCACGCTGT...GACCCACTCTCCAGTAGGGAGGGGCCGGGCCATCCCTGACACGAAGCTCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS TCA 90 bp CGGCACAGTTGTTCTCTGAATGGTCGCTGTCACGGTCCTTGGTGGTaGACCTCATGCCGCTGTGCTTCAGGAGGGAGTCGCCTGCAGTGC +
Preference number: 5 (lower is better)
Translates to: RHSCSLNGRCHGPWW*TSCRCASGGSRLQC
Trigger: GCACTGCAGGCGACTCCCTCCTGAAGCACAGCGGCATGAGGTTCACCACCAAGGACCGTGACAGCGACCATTCAGAGAACAACTGTGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CAA 90 bp CAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTTCGCTGTCACGGTCCTaGGTGGTGAACCTCATGCCG +
Preference number: 5 (lower is better)
Translates to: QTAPESQWGQAGVGVVKFSLSRS*VVNLMP
Trigger: CGGCATGAGGTTCACCACCAAGGACCGTGACAGCGA...AAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CAA 90 bp AGTGGGTCCGCCAGGCACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTGGCGCAGGTACTGCCCATaGAGGTTGGACGTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: SGSARHRWVENIHERVRWRRYCP*RLDVWQ
Trigger: CTGCCACACGTCCAACCTCAATGGGCAGTACCTGCG...CCACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGACCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CAA 90 bp ACCATCCTGGCCAGGGGACGGCAAACAGCACCGGAGTCACAGTGGGGGCAGGCATTCATCTCAGAGAACTaGAGTGAGTACTGCCAGCCG +
Preference number: 5 (lower is better)
Translates to: TILARGRQTAPESQWGQAFISEN*SEYCQP
Trigger: CGGCTGGCAGTACTCACTCAAGTTCTCTGAGATGAA...TGCCTGCCCCCACTGTGACTCCGGTGCTGTTTGCCGTCCCCTGGCCAGGATGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CAA 90 bp GCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCCAGCGGTCTCGGACTCTCTTaGCTTTTTATTGCTCCCCTC +
Preference number: 5 (lower is better)
Translates to: APESQWGQAGVGVVKFASGLGLS*LFIAPL
Trigger: GAGGGGAGCAATAAAAAGCAAAGAGAGTCCGAGACC...GCTGGCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000372338.9
CDS-3UTR CAA 90 bp GAGTGGGTCCGCCAGGCACAGGTGGGTGGAGAACATTCACGAAAGAGTGAGGTGTTGGGGTCGTCAAGTTaGCCAGCCCCCATCAGCAGA +
Preference number: 5 (lower is better)
Translates to: EWVRQAQVGGEHSRKSEVLGSSS*PAPISR
Trigger: TCTGCTGATGGGGGCTGGCAAACTTGACGACCCCAA...CACCTCACTCTTTCGTGAATGTTCTCCACCCACCTGTGCCTGGCGGACCCACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CAA 90 bp CAGAGGCAAGAGATCAGTGAGCTGCCAAATGGAGGGGGTGGGGACGGCGAGAAGAATTGGTGGTGGGGGTaGTACAAGCCTCATCCCAGC +
Preference number: 5 (lower is better)
Translates to: QRQEISELPNGGGGDGEKNWWWG*YKPHPS
Trigger: GCTGGGATGAGGCTTGTACAACCCCCACCACCAATT...CTTCTCGCCGTCCCCACCCCCTCCATTTGGCAGCTCACTGATCTCTTGCCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CAA 90 bp AACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCAATTGGTGGTGGGGGTaGTACAAGCCTCATCCCAGC +
Preference number: 5 (lower is better)
Translates to: NSTGVTVGAGRSWGRQVCNWWWG*YKPHPS
Trigger: GCTGGGATGAGGCTTGTACAACCCCCACCACCAATT...GCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CAA 90 bp AACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCGGAGTCCCTGGGAAATaGGTGGTGGGGGTTGTACAA +
Preference number: 5 (lower is better)
Translates to: NSTGVTVGAGRSWGRQVCGVPGK*VVGVVQ
Trigger: TTGTACAACCCCCACCACCAATTTCCCAGGGACTCC...GCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS CCA 90 bp AGGATGCAGAGGAGATTCAGGGGGTCAGGTTCAGGACCAGGTGCCTaGCACAGGGTAGCGCCCAGAGTGGAGATTCTGTGGGTAGTTAAG +
Preference number: 5 (lower is better)
Translates to: RMQRRFRGSGSGPGA*HRVAPRVEILWVVK
Trigger: CTTAACTACCCACAGAATCTCCACTCTGGGCGCTACCCTGTGCCAGGCACCTGGTCCTGAACCTGACCCCCTGAATCTCCTCTGCATCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000463475.1
ENST00000486250.5
CDS-3UTR CAA 90 bp CAAACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTTCTCTTTGCTTTTTATaGCTCCCCTCGGCCTCCCCC +
Preference number: 5 (lower is better)
Translates to: QTAPESQWGQAGVGVVKFSLCFL*LPSASP
Trigger: GGGGGAGGCCGAGGGGAGCAATAAAAAGCAAAGAGA...AAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000372338.9
CDS-3UTR CAA 90 bp GGCGAGAAGGCGATGTGTGACTTCACCGGCCCAGGGAGCTTCGTGTCAGGGATGACAGCGTGCTGGGTGTaGGGAGGATTCAACAAGAAA +
Preference number: 5 (lower is better)
Translates to: GEKAMCDFTGPGSFVSGMTACWV*GGFNKK
Trigger: TTTCTTGTTGAATCCTCCCAACACCCAGCACGCTGT...CATCCCTGACACGAAGCTCCCTGGGCCGGTGAAGTCACACATCGCCTTCTCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS-3UTR CAA 90 bp GGTCACACGGCCTCTCCCACCAACCCCCAGTGGTGCCAAGTCAAATTTATTGTTGTCTTCCACCGGTCGTaGACCATCTTCCGGCAGGAC +
Preference number: 5 (lower is better)
Translates to: GHTASPTNPQWCQVKFIVVFHRS*TIFRQD
Trigger: GTCCTGCCGGAAGATGGTCAACGACCGGTGGAAGAC...AACAATAAATTTGACTTGGCACCACTGGGGGTTGGTGGGAGAGGCCGTGTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CAA 90 bp AACAGCACCGGAGTCACAGTGGGGGCAGGCAGGAGTTGGGGTCGTCAAGTTTGCTTCATCTCAGAGAACTaGAGTGAGTACTGCCAGCCG +
Preference number: 5 (lower is better)
Translates to: NSTGVTVGAGRSWGRQVCFISEN*SEYCQP
Trigger: CGGCTGGCAGTACTCACTCAAGTTCTCTGAGATGAA...GCAAACTTGACGACCCCAACTCCTGCCTGCCCCCACTGTGACTCCGGTGCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS-3UTR CAA 90 bp CCAGCCCAGAAAACCAAGAGCTTCCCATTAGCGCAGTCCAGCCCCACGGTGCAGACAGCGTGCTGGGTGTaGGGAGGATTCAACAAGAAA +
Preference number: 5 (lower is better)
Translates to: PAQKTKSFPLAQSSPTVQTACWV*GGFNKK
Trigger: TTTCTTGTTGAATCCTCCCAACACCCAGCACGCTGT...CTGCACCGTGGGGCTGGACTGCGCTAATGGGAAGCTCTTGGTTTTCTGGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
CDS TCA 90 bp GGCAGGCCCAAGGGAACCAGGGCAAGCAGTGTTCTCTCTTTCTTCTaGCAGTGGCCACAGGAAAGGCCTTGCCTCTTGTCTGAAGCTTCA +
Preference number: 5 (lower is better)
Translates to: GRPKGTRASSVLSFF*QWPQERPCLLSEAS
Trigger: TGAAGCTTCAGACAAGAGGCAAGGCCTTTCCTGTGGCCACTGTCAGAAGAAAGAGAGAACACTGCTTGCCCTGGTTCCCTTGGGCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372337.6
CDS GCA 72 bp CGCCTGCAGCACCGAGGCCTGGGCGCTCTCCAGGCGTaGGAAGCTGTCGGTGAGGTCGGGGCAGCGCGGGTC +
Preference number: 6 (lower is better)
Translates to: RLQHRGLGALQA*EAVGEVGAARV
Trigger: GACCCGCGCTGCCCCGACCTCACCGACAGCTTCGCACGCCTGGAGAGCGCCCAGGCCTCGGTGCTGCAGGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
ENST00000451466.1
CDS CCA 72 bp GCTGTTGGCGCTGGCAGCCCCAGTGCTGACGACAGGTaGGGGCGCCGTGCCCGGCGCGTGGGCGTGGTTCAG +
Preference number: 6 (lower is better)
Translates to: AVGAGSPSADDR*GRRARRVGVVQ
Trigger: CTGAACCACGCCCACGCGCCGGGCACGGCGCCCCCACCTGTCGTCAGCACTGGGGCTGCCAGCGCCAACAGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
ENST00000451466.1
CDS GCA 72 bp TGCTCCTGGTCGCCCACCAGCCGTGGCTGGGCCTGGTaGTCTGTCAGCGCCTGCAGCACCGAGGCCTGGGCG +
Preference number: 6 (lower is better)
Translates to: CSWSPTSRGWAW*SVSACSTEAWA
Trigger: CGCCCAGGCCTCGGTGCTGCAGGCGCTGACAGAGCACCAGGCCCAGCCACGGCTGGTGGGCGACCAGGAGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
ENST00000451466.1
CDS CAA 90 bp CGGTCCTCAAGTTGGGCAGCGCCGCCCATGGTCTTCCACCGGTCGTaGACCATCTTCCGGCAGGACTGGCGGGGGCGCCGGGCGAGGCGC +
Preference number: 6 (lower is better)
Translates to: RSSSWAAPPMVFHRS*TIFRQDWRGRRARR
Trigger: GCGCCTCGCCCGGCGCCCCCGCCAGTCCTGCCGGAAGATGGTCAACGACCGGTGGAAGACCATGGGCGGCGCTGCCCAACTTGAGGACCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000372338.9
ENST00000448616.5
ENST00000451466.1
ENST00000463475.1
ENST00000486250.5
CDS TCA 72 bp GTTGGGCAGCGCCGCCCATGGTCTTCCACCGGTCGTTaGCCATCTTCCGGCAGGACTGGCGGGGGCGCCGGG +
Preference number: 6 (lower is better)
Translates to: VGQRRPWSSTGR*PSSGRTGGGAG
Trigger: CCCGGCGCCCCCGCCAGTCCTGCCGGAAGATGGTCAACGACCGGTGGAAGACCATGGGCGGCGCTGCCCAAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000372338.9
ENST00000448616.5
ENST00000451466.1
ENST00000463475.1
ENST00000486250.5
CDS CCA 72 bp GGCCGCTGCGGCTTGTCGCGCGGCCGGTCCTCAAGTTaGGCAGCGCCGCCCATGGTCTTCCACCGGTCGTTG +
Preference number: 6 (lower is better)
Translates to: GRCGLSRGRSSS*AAPPMVFHRSL
Trigger: CAACGACCGGTGGAAGACCATGGGCGGCGCTGCCCAACTTGAGGACCGGCCGCGCGACAAGCCGCAGCGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000448616.5
ENST00000451466.1
CDS CCA 72 bp GTGCTGACGACAGGTGGGGGCGCCGTGCCCGGCGCGTaGGCGTGGTTCAGGAAGAGCACGGCACCGGTGACA +
Preference number: 6 (lower is better)
Translates to: VLTTGGGAVPGA*AWFRKSTAPVT
Trigger: TGTCACCGGTGCCGTGCTCTTCCTGAACCACGCCCACGCGCCGGGCACGGCGCCCCCACCTGTCGTCAGCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
ENST00000451466.1
CDS CAA 72 bp CGGCCGCTGCGGCTTGTCGCGCGGCCGGTCCTCAAGTaGGGCAGCGCCGCCCATGGTCTTCCACCGGTCGTT +
Preference number: 6 (lower is better)
Translates to: RPLRLVARPVLK*GSAAHGLPPVV
Trigger: AACGACCGGTGGAAGACCATGGGCGGCGCTGCCCAACTTGAGGACCGGCCGCGCGACAAGCCGCAGCGGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000448616.5
ENST00000451466.1
CDS GCA 72 bp CTACAGCCAGCAGCACAGCCAGGGCCAGCAGCACGGTaGACAGCACGTAGCCGCAGCTCGGCCGCTGCGGCT +
Preference number: 6 (lower is better)
Translates to: LQPAAQPGPAAR*TARSRSSAAAA
Trigger: AGCCGCAGCGGCCGAGCTGCGGCTACGTGCTGTGCACCGTGCTGCTGGCCCTGGCTGTGCTGCTGGCTGTAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000448616.5
ENST00000451466.1
CDS CCA 72 bp GCCTGGTGCTCTGTCAGCGCCTGCAGCACCGAGGCCTaGGCGCTCTCCAGGCGTGCGAAGCTGTCGGTGAGG +
Preference number: 6 (lower is better)
Translates to: AWCSVSACSTEA*ALSRRAKLSVR
Trigger: CCTCACCGACAGCTTCGCACGCCTGGAGAGCGCCCAGGCCTCGGTGCTGCAGGCGCTGACAGAGCACCAGGC
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
ENST00000451466.1
CDS CCA 72 bp AGCAGCTCCTGCTCCTGGTCGCCCACCAGCCGTGGCTaGGCCTGGTGCTCTGTCAGCGCCTGCAGCACCGAG +
Preference number: 6 (lower is better)
Translates to: SSSCSWSPTSRG*AWCSVSACSTE
Trigger: CTCGGTGCTGCAGGCGCTGACAGAGCACCAGGCCCAGCCACGGCTGGTGGGCGACCAGGAGCAGGAGCTGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
ENST00000451466.1
CDS CAA 72 bp AGTTGGGCAGCGCCGCCCATGGTCTTCCACCGGTCGTaGACCATCTTCCGGCAGGACTGGCGGGGGCGCCGG +
Preference number: 6 (lower is better)
Translates to: SWAAPPMVFHRS*TIFRQDWRGRR
Trigger: CCGGCGCCCCCGCCAGTCCTGCCGGAAGATGGTCAACGACCGGTGGAAGACCATGGGCGGCGCTGCCCAACT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000372338.9
ENST00000448616.5
ENST00000451466.1
ENST00000463475.1
ENST00000486250.5
CDS CAA 90 bp GCCGCAGCTCGGCCGCTGCGGCTTGTCGCGCGGCCGGTCCTCAAGTaGGGCAGCGCCGCCCATGGTCTTCCACCGGTCGTTGACCATCTT +
Preference number: 6 (lower is better)
Translates to: AAARPLRLVARPVLK*GSAAHGLPPVVDHL
Trigger: AAGATGGTCAACGACCGGTGGAAGACCATGGGCGGCGCTGCCCAACTTGAGGACCGGCCGCGCGACAAGCCGCAGCGGCCGAGCTGCGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000448616.5
ENST00000451466.1
CDS TCA 72 bp GCCCCCGGTCCCTCTGCAGGGCATCCAGGATGTCGCTaGCGGAGTTCACCAGGTGAGCCATGTGGCCCTGGC +
Preference number: 6 (lower is better)
Translates to: APGPSAGHPGCR*RSSPGEPCGPG
Trigger: GCCAGGGCCACATGGCTCACCTGGTGAACTCCGTCAGCGACATCCTGGATGCCCTGCAGAGGGACCGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
ENST00000451466.1
CDS GCA 72 bp ATGGGGCGACAGGGACCAGCAGGGCCAAGGACAAGGTaGACCAGTCTAGCGGTCCTCCCGGACCGGCCGGAT +
Preference number: 6 (lower is better)
Translates to: MGRQGPAGPRTR*TSLAVLPDRPD
Trigger: ATCCGGCCGGTCCGGGAGGACCGCTAGACTGGTGCACCTTGTCCTTGGCCCTGCTGGTCCCTGTCGCCCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS CCA 72 bp CCGCCTCCGAAAAGACCTAGGGAAAGGAGGCCGAACTaGCCCCCAGATAACGCGGCCGGCCGGAGGGCAGCA +
Preference number: 6 (lower is better)
Translates to: PPPKRPRERRPN*PPDNAAGRRAA
Trigger: TGCTGCCCTCCGGCCGGCCGCGTTATCTGGGGGCCAGTTCGGCCTCCTTTCCCTAGGTCTTTTCGGAGGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372338.9
ENST00000451466.1
ENST00000486250.5
CDS GCA 72 bp ATGGGGCGACAGGGACCAGCAGGGCCAAGGACAAGGTaGACCAGTCTAGCGGTCCTAGCCAGTGCTCCCCGG +
Preference number: 6 (lower is better)
Translates to: MGRQGPAGPRTR*TSLAVLASAPR
Trigger: CCGGGGAGCACTGGCTAGGACCGCTAGACTGGTGCACCTTGTCCTTGGCCCTGCTGGTCCCTGTCGCCCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444139.5
CDS CCA 72 bp TTTGTCTGCGGCTTGTCGCGCGGCCGGTCCTCAAGTTaGGCAGCGCCGCCCATGGTCTTCCACCGGTCGTTG +
Preference number: 6 (lower is better)
Translates to: FVCGLSRGRSSS*AAPPMVFHRSL
Trigger: CAACGACCGGTGGAAGACCATGGGCGGCGCTGCCCAACTTGAGGACCGGCCGCGCGACAAGCCGCAGACAAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463475.1
ENST00000486250.5
CDS TCA 72 bp GGGAGTCGCCTGCAGTGCCGGAATAGTCAGCCACGGTaGGCGGGTACCCGTCTTCCTCAGGGTCCACGGAGA +
Preference number: 6 (lower is better)
Translates to: GSRLQCRNSQPR*AGTRLPQGPRR
Trigger: TCTCCGTGGACCCTGAGGAAGACGGGTACCCGCTCACCGTGGCTGACTATTCCGGCACTGCAGGCGACTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS TCA 72 bp TGCACCAGTCTAGCGGTCCTAGCCAGTGCTCCCCGGTaGGCCTGCCAAAGCCGTCTCGGTACGCATCCCAGC +
Preference number: 6 (lower is better)
Translates to: CTSLAVLASAPR*ACQSRLGTHPS
Trigger: GCTGGGATGCGTACCGAGACGGCTTTGGCAGGCTCACCGGGGAGCACTGGCTAGGACCGCTAGACTGGTGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444139.5
CDS CAA 72 bp ATTTGTCTGCGGCTTGTCGCGCGGCCGGTCCTCAAGTaGGGCAGCGCCGCCCATGGTCTTCCACCGGTCGTT +
Preference number: 6 (lower is better)
Translates to: ICLRLVARPVLK*GSAAHGLPPVV
Trigger: AACGACCGGTGGAAGACCATGGGCGGCGCTGCCCAACTTGAGGACCGGCCGCGCGACAAGCCGCAGACAAAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463475.1
ENST00000486250.5
CDS CAA 90 bp ACGGGGCTGATTTGTCTGCGGCTTGTCGCGCGGCCGGTCCTCAAGTaGGGCAGCGCCGCCCATGGTCTTCCACCGGTCGTTGACCATCTT +
Preference number: 6 (lower is better)
Translates to: TGLICLRLVARPVLK*GSAAHGLPPVVDHL
Trigger: AAGATGGTCAACGACCGGTGGAAGACCATGGGCGGCGCTGCCCAACTTGAGGACCGGCCGCGCGACAAGCCGCAGACAAATCAGCCCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463475.1
ENST00000486250.5
CDS CCA 72 bp CCGCAGCTCGGCCGCCAGGGCCACACAGCATGTCAGTaGGTGAGACAAACCTGGCCACAAGGGAGGAGAGAA +
Preference number: 6 (lower is better)
Translates to: PQLGRQGHTACQ*VRQTWPQGRRE
Trigger: TTCTCTCCTCCCTTGTGGCCAGGTTTGTCTCACCCACTGACATGCTGTGTGGCCCTGGCGGCCGAGCTGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372337.6
CDS TCA 72 bp AGCTCGGCCGCCAGGGCCACACAGCATGTCAGTGGGTaGGACAAACCTGGCCACAAGGGAGGAGAGAAGGCT +
Preference number: 6 (lower is better)
Translates to: SSAARATQHVSG*DKPGHKGGEKA
Trigger: AGCCTTCTCTCCTCCCTTGTGGCCAGGTTTGTCTCACCCACTGACATGCTGTGTGGCCCTGGCGGCCGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372337.6
CDS TCA 72 bp AGGGCATCCAGGATGTCGCTGACGGAGTTCACCAGGTaGGCCATGTGGCCCTGGCTCTCAGAGAGAAGCTGG +
Preference number: 6 (lower is better)
Translates to: RASRMSLTEFTR*AMWPWLSERSW
Trigger: CCAGCTTCTCTCTGAGAGCCAGGGCCACATGGCTCACCTGGTGAACTCCGTCAGCGACATCCTGGATGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
ENST00000451466.1
CDS TCA 72 bp CCGGACCGGCCGGATCTTCATCTCAGAGAACTTGAGTaGGTACTGCCAGCCGGTCCAGGAGGACCACTCCAC +
Preference number: 6 (lower is better)
Translates to: PDRPDLHLRELE*VLPAGPGGPLH
Trigger: GTGGAGTGGTCCTCCTGGACCGGCTGGCAGTACTCACTCAAGTTCTCTGAGATGAAGATCCGGCCGGTCCGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS TCA 72 bp CCTCCCGGACCGGCCGGATCTTCATCTCAGAGAACTTaGGTGAGTACTGCCAGCCGGTCCAGGAGGACCACT +
Preference number: 6 (lower is better)
Translates to: PPGPAGSSSQRT*VSTASRSRRTT
Trigger: AGTGGTCCTCCTGGACCGGCTGGCAGTACTCACTCAAGTTCTCTGAGATGAAGATCCGGCCGGTCCGGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS CCA 72 bp CAGGGCCACACAGCATGTCAGTGGGTGAGACAAACCTaGCCACAAGGGAGGAGAGAAGGCTGGCCCAGGAGA +
Preference number: 6 (lower is better)
Translates to: QGHTACQWVRQT*PQGRREGWPRR
Trigger: TCTCCTGGGCCAGCCTTCTCTCCTCCCTTGTGGCCAGGTTTGTCTCACCCACTGACATGCTGTGTGGCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372337.6
CDS CAA 72 bp TCCTCCCGGACCGGCCGGATCTTCATCTCAGAGAACTaGAGTGAGTACTGCCAGCCGGTCCAGGAGGACCAC +
Preference number: 6 (lower is better)
Translates to: SSRTGRIFISEN*SEYCQPVQEDH
Trigger: GTGGTCCTCCTGGACCGGCTGGCAGTACTCACTCAAGTTCTCTGAGATGAAGATCCGGCCGGTCCGGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS CAA 72 bp GAGGTGAGGAAACGGAGACTCAGCAACGGGGCTGATTaGTCTGCGGCTTGTCGCGCGGCCGGTCCTCAAGTT +
Preference number: 6 (lower is better)
Translates to: EVRKRRLSNGAD*SAACRAAGPQV
Trigger: AACTTGAGGACCGGCCGCGCGACAAGCCGCAGACAAATCAGCCCCGTTGCTGAGTCTCCGTTTCCTCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463475.1
ENST00000486250.5
CDS TCA 72 bp CCAGGCACCGCGGTAGAAGGCGGCACAGTTGTTCTCTaGATGGTCGCTGTCACGGTCCTTGGTGGTGAACCT +
Preference number: 6 (lower is better)
Translates to: PGTAVEGGTVVL*MVAVTVLGGEP
Trigger: AGGTTCACCACCAAGGACCGTGACAGCGACCATTCAGAGAACAACTGTGCCGCCTTCTACCGCGGTGCCTGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS CCA 72 bp TGTCACAGTACACCTGGAAGCCGGCCGGGTAGTGGGTaGGAAAGACAGAGTAGACGCCATCGTCCTGCTGTC +
Preference number: 6 (lower is better)
Translates to: CHSTPGSRPGSG*ERQSRRHRPAV
Trigger: GACAGCAGGACGATGGCGTCTACTCTGTCTTTCCCACCCACTACCCGGCCGGCTTCCAGGTGTACTGTGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000444139.5
ENST00000448616.5
ENST00000451466.1
CDS TCA 72 bp TGTTCTCTGAATGGTCGCTGTCACGGTCCTTGGTGGTaGACCTCATGCCGCTGTGCTTCAGGAGGGAGTCGC +
Preference number: 6 (lower is better)
Translates to: CSLNGRCHGPWW*TSCRCASGGSR
Trigger: GCGACTCCCTCCTGAAGCACAGCGGCATGAGGTTCACCACCAAGGACCGTGACAGCGACCATTCAGAGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372337.6
ENST00000372338.9
ENST00000448616.5
CDS CCA 72 bp GCCTGGCACAGGGTAGCGCCCAGAGTGGAGATTCTGTaGGTAGTTAAGATGCCCATTGTAGAGGTGAGGAAA +
Preference number: 6 (lower is better)
Translates to: AWHRVAPRVEIL*VVKMPIVEVRK
Trigger: TTTCCTCACCTCTACAATGGGCATCTTAACTACCCACAGAATCTCCACTCTGGGCGCTACCCTGTGCCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463475.1
ENST00000486250.5