RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FHOD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000135723

Ensembl transcript IDs: ENST00000258201.9, ENST00000561922.1, ENST00000562266.1, ENST00000566006.1, ENST00000567509.1, ENST00000567561.1, ENST00000567752.5, ENST00000568595.1, ENST00000569085.1, ENST00000569888.1

Found 560 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACGCGCGGGGCAGCCCCCGCCTTCCAGAGAACGGCGGCTCCTCTTaGCCTCCTCAGAAGAAGGCTTTCGTCGTTCCCGCCGCCCACCAG +
Preference number: 1 (lower is better)
Translates to: HARGSPRLPENGGSS*PPQKKAFVVPAAHQ
Trigger: CTGGTGGGCGGCGGGAACGACGAAAGCCTTCTTCTGAGGAGGGCAAGAGGAGCCGCCGTTCTCTGGAAGGCGGGGGCTGCCCCGCGCGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR GCA 90 bp TGGGGCCAGCTCATGCTTGGCCAAGCTCCGCAGGCTCTCCTCGGCTaGCCGGCTCCGGCGCTCCAGCTGCCCCAGGTTCTCAGTCAGCTG +
Preference number: 1 (lower is better)
Translates to: WGQLMLGQAPQALLG*PAPALQLPQVLSQL
Trigger: CAGCTGACTGAGAACCTGGGGCAGCTGGAGCGCCGGAGCCGGGCAGCCGAGGAGAGCCTGCGGAGCTTGGCCAAGCATGAGCTGGCCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567561.1
3UTR CCA 90 bp CCCAGAGTTGCCGGGCATCTGGGTGTCCACCCGCCTCATTGGGCATaGCCCCGGCAAGTGTCTCTGCCCGGCCCTGGGCCAGCGCAACCT +
Preference number: 1 (lower is better)
Translates to: PRVAGHLGVHPPHWA*PRQVSLPGPGPAQP
Trigger: AGGTTGCGCTGGCCCAGGGCCGGGCAGAGACACTTGCCGGGGCCATGCCCAATGAGGCGGGTGGACACCCAGATGCCCGGCAACTCTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR CCA 90 bp GGGCTCAGCCTTGGGGCTTGCTGGTATCAGTGGCTCCTTGGGCTCTaGTGCAAGGCTTCGCTGGGCCCGGAGCAGGACACAGGGGGCAGG +
Preference number: 1 (lower is better)
Translates to: GLSLGACWYQWLLGL*CKASLGPEQDTGGR
Trigger: CCTGCCCCCTGTGTCCTGCTCCGGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACCAGCAAGCCCCAAGGCTGAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR CCA 90 bp TGCGTGCGCAGGTCGACGTCAGTGCCCGCAGTGCCCAGGTGGCGCTaGACCAGCGCTTCCATGCCCTGCTGCTCCAGTGCATCCGTCACA +
Preference number: 1 (lower is better)
Translates to: CVRRSTSVPAVPRWR*TSASMPCCSSASVT
Trigger: TGTGACGGATGCACTGGAGCAGCAGGGCATGGAAGCGCTGGTCCAGCGCCACCTGGGCACTGCGGGCACTGACGTCGACCTGCGCACGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR CCA 90 bp ACAAGCTGCGTGCGCAGGTCGACGTCAGTGCCCGCAGTGCCCAGGTaGCGCTGGACCAGCGCTTCCATGCCCTGCTGCTCCAGTGCATCC +
Preference number: 1 (lower is better)
Translates to: TSCVRRSTSVPAVPR*RWTSASMPCCSSAS
Trigger: GGATGCACTGGAGCAGCAGGGCATGGAAGCGCTGGTCCAGCGCCACCTGGGCACTGCGGGCACTGACGTCGACCTGCGCACGCAGCTTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR CCA 90 bp GTCGGGCCGTGTCCACTGAGACAGGGTCCAGTGAAGCCCAGAGGGTaGCGCAGGGCCCAAAGCGGCTTGCAGAGACTCCATGGCCCCCAG +
Preference number: 1 (lower is better)
Translates to: VGPCPLRQGPVKPRG*RRAQSGLQRLHGPQ
Trigger: CTGGGGGCCATGGAGTCTCTGCAAGCCGCTTTGGGCCCTGCGCCACCCTCTGGGCTTCACTGGACCCTGTCTCAGTGGACACGGCCCGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR GCA 90 bp TGGGTGTCCACCCGCCTCATTGGGCATGGCCCCGGCAAGTGTCTCTaGCCGGCCCTGGGCCAGCGCAACCTGCTTCTCTGTTTCTGCTGC +
Preference number: 1 (lower is better)
Translates to: WVSTRLIGHGPGKCL*PALGQRNLLLCFCC
Trigger: GCAGCAGAAACAGAGAAGCAGGTTGCGCTGGCCCAGGGCCGGGCAGAGACACTTGCCGGGGCCATGCCCAATGAGGCGGGTGGACACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR GCA 90 bp CTCAGCCTTGGGGCTTGCTGGTATCAGTGGCTCCTTGGGCTCTGGTaGAAGGCTTCGCTGGGCCCGGAGCAGGACACAGGGGGCAGGGCT +
Preference number: 1 (lower is better)
Translates to: LSLGACWYQWLLGLW*KASLGPEQDTGGRA
Trigger: AGCCCTGCCCCCTGTGTCCTGCTCCGGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACCAGCAAGCCCCAAGGCTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR GCA 90 bp AAGCTCCGCAGGCTCTCCTCGGCTGCCCGGCTCCGGCGCTCCAGCTaGCCCAGGTTCTCAGTCAGCTGTTCAAAGTCCACCTGGGAGCCA +
Preference number: 1 (lower is better)
Translates to: KLRRLSSAARLRRSS*PRFSVSCSKSTWEP
Trigger: TGGCTCCCAGGTGGACTTTGAACAGCTGACTGAGAACCTGGGGCAGCTGGAGCGCCGGAGCCGGGCAGCCGAGGAGAGCCTGCGGAGCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567561.1
3UTR CCA 90 bp CCCGCCTCATTGGGCATGGCCCCGGCAAGTGTCTCTGCCCGGCCCTaGGCCAGCGCAACCTGCTTCTCTGTTTCTGCTGCCGCCACATTC +
Preference number: 1 (lower is better)
Translates to: PASLGMAPASVSARP*ASATCFSVSAAATF
Trigger: GAATGTGGCGGCAGCAGAAACAGAGAAGCAGGTTGCGCTGGCCCAGGGCCGGGCAGAGACACTTGCCGGGGCCATGCCCAATGAGGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR GCA 90 bp ATGGCCCCGGCAAGTGTCTCTGCCCGGCCCTGGGCCAGCGCAACCTaGTTCTCTGTTTCTGCTGCCGCCACATTCTCCAGGAACCGGGCT +
Preference number: 1 (lower is better)
Translates to: MAPASVSARPWASAT*FSVSAAATFSRNRA
Trigger: AGCCCGGTTCCTGGAGAATGTGGCGGCAGCAGAAACAGAGAAGCAGGTTGCGCTGGCCCAGGGCCGGGCAGAGACACTTGCCGGGGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR CCA 90 bp CTTGCTGGTATCAGTGGCTCCTTGGGCTCTGGTGCAAGGCTTCGCTaGGCCCGGAGCAGGACACAGGGGGCAGGGCTCTGGGGTGTTCTG +
Preference number: 1 (lower is better)
Translates to: LAGISGSLGSGARLR*ARSRTQGAGLWGVL
Trigger: CAGAACACCCCAGAGCCCTGCCCCCTGTGTCCTGCTCCGGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACCAGCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR CCA 90 bp CCCAGATGGGCTCAGCCTTGGGGCTTGCTGGTATCAGTGGCTCCTTaGGCTCTGGTGCAAGGCTTCGCTGGGCCCGGAGCAGGACACAGG +
Preference number: 1 (lower is better)
Translates to: PRWAQPWGLLVSVAP*ALVQGFAGPGAGHR
Trigger: CCTGTGTCCTGCTCCGGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACCAGCAAGCCCCAAGGCTGAGCCCATCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR GCA 90 bp GGGTGCACGGGTAGGGAGCTCCCAGATGGGCTCAGCCTTGGGGCTTaGTGGTATCAGTGGCTCCTTGGGCTCTGGTGCAAGGCTTCGCTG +
Preference number: 1 (lower is better)
Translates to: GCTGRELPDGLSLGA*WYQWLLGLWCKASL
Trigger: CAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACCAGCAAGCCCCAAGGCTGAGCCCATCTGGGAGCTCCCTACCCGTGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR GCA 90 bp CGTCAGTGCCCGCAGTGCCCAGGTGGCGCTGGACCAGCGCTTCCATaGCCTGCTGCTCCAGTGCATCCGTCACATCGTAGAAGGAGTCCT +
Preference number: 1 (lower is better)
Translates to: RQCPQCPGGAGPALP*PAAPVHPSHRRRSP
Trigger: AGGACTCCTTCTACGATGTGACGGATGCACTGGAGCAGCAGGGCATGGAAGCGCTGGTCCAGCGCCACCTGGGCACTGCGGGCACTGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR CCA 90 bp GCTGAGGGTGCCACAGAGATGGTAGGAAAAAGGTTCACTGAAGCTTaGAGACCGGAGGGAGGGCCCACAGGGCTGGAGGCGGGGCCTGTC +
Preference number: 1 (lower is better)
Translates to: AEGATEMVGKRFTEA*RPEGGPTGLEAGPV
Trigger: GACAGGCCCCGCCTCCAGCCCTGTGGGCCCTCCCTCCGGTCTCCAAGCTTCAGTGAACCTTTTTCCTACCATCTCTGTGGCACCCTCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR CCA 90 bp CGTTCCCGGCAAGTCCGATACTCAAGCGCAAATTCCCGCAGCGTGTaGCAGAACTGCATGATGCGCACTTCACGGGCCGCCTGCGGGGTG +
Preference number: 1 (lower is better)
Translates to: RSRQVRYSSANSRSV*QNCMMRTSRAACGV
Trigger: CACCCCGCAGGCGGCCCGTGAAGTGCGCATCATGCAGTTCTGCCACACGCTGCGGGAATTTGCGCTTGAGTATCGGACTTGCCGGGAACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567561.1
3UTR TCA 90 bp TCCGATACTCAAGCGCAAATTCCCGCAGCGTGTGGCAGAACTGCATaGTGCGCACTTCACGGGCCGCCTGCGGGGTGTAGCCCAGGTAGA +
Preference number: 1 (lower is better)
Translates to: SDTQAQIPAACGRTA*CALHGPPAGCSPGR
Trigger: TCTACCTGGGCTACACCCCGCAGGCGGCCCGTGAAGTGCGCATCATGCAGTTCTGCCACACGCTGCGGGAATTTGCGCTTGAGTATCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567561.1
3UTR GCA 90 bp TGTCTCTGCCCGGCCCTGGGCCAGCGCAACCTGCTTCTCTGTTTCTaGTGCCGCCACATTCTCCAGGAACCGGGCTTTGTAGATGCTCCT +
Preference number: 1 (lower is better)
Translates to: CLCPALGQRNLLLCF*CRHILQEPGFVDAP
Trigger: AGGAGCATCTACAAAGCCCGGTTCCTGGAGAATGTGGCGGCAGCAGAAACAGAGAAGCAGGTTGCGCTGGCCCAGGGCCGGGCAGAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR CCA 90 bp AGGCATGGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTaGGCCCTCCTCACTCTGTCATCTCCTGCACTGCAGTCCAGGGTC +
Preference number: 1 (lower is better)
Translates to: RHGSWAQSSGARILL*ALLTLSSPALQSRV
Trigger: GACCCTGGACTGCAGTGCAGGAGATGACAGAGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCCATGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
3UTR CCA 90 bp GAGTCATCAGGAAGTTCTCGGCTGGGCCCAGGGGTATGTCAGGGTTaGCCAGCTGGGCTTCCTCAATCTTCTGCCGCTCTTCCTCCGTGG +
Preference number: 1 (lower is better)
Translates to: ESSGSSRLGPGVCQG*PAGLPQSSAALPPW
Trigger: CCACGGAGGAAGAGCGGCAGAAGATTGAGGAAGCCCAGCTGGCCAACCCTGACATACCCCTGGGCCCAGCCGAGAACTTCCTGATGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567561.1
3UTR CCA 90 bp CTCCTCAGAAGAAGGCTTTCGTCGTTCCCGCCGCCCACCAGCGCCTaGGGCTTCTTCGATGTCTCCATCCTCCAATTTCAGGGCGTTCTC +
Preference number: 1 (lower is better)
Translates to: LLRRRLSSFPPPTSA*GFFDVSILQFQGVL
Trigger: GAGAACGCCCTGAAATTGGAGGATGGAGACATCGAAGAAGCCCCAGGCGCTGGTGGGCGGCGGGAACGACGAAAGCCTTCTTCTGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR GCA 90 bp CCCCGGGTCTTGTTGCGCTCACGGTATGTGGCCTGCTTCTGCTGCTaGTGTAGCACTCGTTCCCGGCAAGTCCGATACTCAAGCGCAAAT +
Preference number: 1 (lower is better)
Translates to: PRVLLRSRYVACFCC*CSTRSRQVRYSSAN
Trigger: ATTTGCGCTTGAGTATCGGACTTGCCGGGAACGAGTGCTACAGCAGCAGCAGAAGCAGGCCACATACCGTGAGCGCAACAAGACCCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567561.1
3UTR TCA 90 bp ACAGTGGCTCAGCAATTTCCCGCTCCATGCTGTCATAGTCCAGCTTaGAGGCCCAGAGTTGTAGACGAGCAGCGAGGCCGCCAATGGAGG +
Preference number: 1 (lower is better)
Translates to: TVAQQFPAPCCHSPA*RPRVVDEQRGRQWR
Trigger: CCTCCATTGGCGGCCTCGCTGCTCGTCTACAACTCTGGGCCTTCAAGCTGGACTATGACAGCATGGAGCGGGAAATTGCTGAGCCACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567509.1
ENST00000567561.1
3UTR TCA 90 bp TTCACCACCAAGCGGGACAGGCTGGCACACAATGTGTACAGCCACTaGATAGTGTCACTGTGGGCCACCACCCCCAGCATTCCATCCACA +
Preference number: 1 (lower is better)
Translates to: FTTKRDRLAHNVYSH*IVSLWATTPSIPST
Trigger: TGTGGATGGAATGCTGGGGGTGGTGGCCCACAGTGACACTATTCAGTGGCTGTACACATTGTGTGCCAGCCTGTCCCGCTTGGTGGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR GCA 90 bp ATTGGCCCAGGGAGGAGCACCGGTGGTGCTGGCCACAGAGTTCACTaGACGGATGAACAGCGGTGCGTTGTTTTCGGAGTATTCTACAAA +
Preference number: 1 (lower is better)
Translates to: IGPGRSTGGAGHRVH*TDEQRCVVFGVFYK
Trigger: TTTGTAGAATACTCCGAAAACAACGCACCGCTGTTCATCCGTGCAGTGAACTCTGTGGCCAGCACCACCGGTGCTCCTCCCTGGGCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR TCA 90 bp AGGGAGGAGCACCGGTGGTGCTGGCCACAGAGTTCACTGCACGGATaGACAGCGGTGCGTTGTTTTCGGAGTATTCTACAAACACCAACA +
Preference number: 1 (lower is better)
Translates to: REEHRWCWPQSSLHG*TAVRCFRSILQTPT
Trigger: TGTTGGTGTTTGTAGAATACTCCGAAAACAACGCACCGCTGTTCATCCGTGCAGTGAACTCTGTGGCCAGCACCACCGGTGCTCCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR GCA 90 bp GCTCCGTGCGTTCAAGGAGCTCACACACATGCACATGCATATGCATaGACACACACACATACACACACACTCACATGCATACACACACGG +
Preference number: 1 (lower is better)
Translates to: APCVQGAHTHAHAYA*THTHTHTLTCIHTR
Trigger: CCGTGTGTGTATGCATGTGAGTGTGTGTGTATGTGTGTGTGTGCATGCATATGCATGTGCATGTGTGTGAGCTCCTTGAACGCACGGAGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
3UTR GCA 90 bp TTTTGCTCCGTGCGTTCAAGGAGCTCACACACATGCACATGCATATaGATGCACACACACACATACACACACACTCACATGCATACACAC +
Preference number: 1 (lower is better)
Translates to: FCSVRSRSSHTCTCI*MHTHTYTHTHMHTH
Trigger: GTGTGTATGCATGTGAGTGTGTGTGTATGTGTGTGTGTGCATGCATATGCATGTGCATGTGTGTGAGCTCCTTGAACGCACGGAGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
3UTR GCA 90 bp ATTTTATTTTGCTCCGTGCGTTCAAGGAGCTCACACACATGCACATaGATATGCATGCACACACACACATACACACACACTCACATGCAT +
Preference number: 1 (lower is better)
Translates to: ILFCSVRSRSSHTCT*ICMHTHTYTHTHMH
Trigger: ATGCATGTGAGTGTGTGTGTATGTGTGTGTGTGCATGCATATGCATGTGCATGTGTGTGAGCTCCTTGAACGCACGGAGCAAAATAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258201.9
3UTR CAA 90 bp GCACGCGCGGGGCAGCCCCCGCCTTCCAGAGAACGGCGGCTCCTCTaGCCCTCCTCAGAAGAAGGCTTTCGTCGTTCCCGCCGCCCACCA +
Preference number: 2 (lower is better)
Translates to: ARAGQPPPSRERRLL*PSSEEGFRRSRRPP
Trigger: TGGTGGGCGGCGGGAACGACGAAAGCCTTCTTCTGAGGAGGGCAAGAGGAGCCGCCGTTCTCTGGAAGGCGGGGGCTGCCCCGCGCGTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR-3UTR CCA 90 bp AGAGGGTGGCGCAGGGCCCAAAGCGGCTTGCAGAGACTCCATGGCCCCCAGCCAGTGCCCAGGTGGCGCTaGACCAGCGCTTCCATGCCC +
Preference number: 2 (lower is better)
Translates to: RGWRRAQSGLQRLHGPQPVPRWR*TSASMP
Trigger: GGGCATGGAAGCGCTGGTCCAGCGCCACCTGGGCAC...TGGCTGGGGGCCATGGAGTCTCTGCAAGCCGCTTTGGGCCCTGCGCCACCCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR-3UTR CCA 90 bp AGTCGGGCCGTGTCCACTGAGACAGGGTCCAGTGAAGCCCAGAGGGTGGCGCAGGAGGGCCCACAGGGCTaGAGGCGGGGCCTGTCAGCA +
Preference number: 2 (lower is better)
Translates to: SRAVSTETGSSEAQRVAQEGPQG*RRGLSA
Trigger: TGCTGACAGGCCCCGCCTCCAGCCCTGTGGGCCCTC...CTGCGCCACCCTCTGGGCTTCACTGGACCCTGTCTCAGTGGACACGGCCCGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR CAA 90 bp CAGGGTCCAGTGAAGCCCAGAGGGTGGCGCAGGGCCCAAAGCGGCTaGCAGAGACTCCATGGCCCCCAGCCAGCTTCAGCTCACGCCAGA +
Preference number: 2 (lower is better)
Translates to: QGPVKPRGWRRAQSG*QRLHGPQPASAHAR
Trigger: TCTGGCGTGAGCTGAAGCTGGCTGGGGGCCATGGAGTCTCTGCAAGCCGCTTTGGGCCCTGCGCCACCCTCTGGGCTTCACTGGACCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR-3UTR CCA 90 bp GGCTTGCTGGTATCAGTGGCTCCTTGGGCTCTGGTGCAAGGCTTCGCTGGGCCCGTCTCTGCCCGGCCCTaGGCCAGCGCAACCTGCTTC +
Preference number: 2 (lower is better)
Translates to: GLLVSVAPWALVQGFAGPVSARP*ASATCF
Trigger: GAAGCAGGTTGCGCTGGCCCAGGGCCGGGCAGAGAC...GGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACCAGCAAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR-3UTR CCA 90 bp CCAGAGGGTGGCGCAGGGCCCAAAGCGGCTTGCAGAGACTCCATGGCCCCCAGCGAGTTGCCGGGCATCTaGGTGTCCACCCGCCTCATT +
Preference number: 2 (lower is better)
Translates to: PEGGAGPKAACRDSMAPSELPGI*VSTRLI
Trigger: AATGAGGCGGGTGGACACCCAGATGCCCGGCAACTC...GCTGGGGGCCATGGAGTCTCTGCAAGCCGCTTTGGGCCCTGCGCCACCCTCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR-3UTR CCA 90 bp CCAGAGGGTGGCGCAGGGCCCAAAGCGGCTTGCAGAGACTCCATGGCCCCCAGCGCTTGCTGGTATCAGTaGCTCCTTGGGCTCTGGTGC +
Preference number: 2 (lower is better)
Translates to: PEGGAGPKAACRDSMAPSACWYQ*LLGLWC
Trigger: GCACCAGAGCCCAAGGAGCCACTGATACCAGCAAGC...GCTGGGGGCCATGGAGTCTCTGCAAGCCGCTTTGGGCCCTGCGCCACCCTCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR CAA 90 bp TCCCAGATGGGCTCAGCCTTGGGGCTTGCTGGTATCAGTGGCTCCTaGGGCTCTGGTGCAAGGCTTCGCTGGGCCCGGAGCAGGACACAG +
Preference number: 2 (lower is better)
Translates to: SQMGSALGLAGISGS*GSGARLRWARSRTQ
Trigger: CTGTGTCCTGCTCCGGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACCAGCAAGCCCCAAGGCTGAGCCCATCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR CAA 90 bp GAGAGCCTGGGTGCACGGGTAGGGAGCTCCCAGATGGGCTCAGCCTaGGGGCTTGCTGGTATCAGTGGCTCCTTGGGCTCTGGTGCAAGG +
Preference number: 2 (lower is better)
Translates to: ESLGARVGSSQMGSA*GLAGISGSLGSGAR
Trigger: CCTTGCACCAGAGCCCAAGGAGCCACTGATACCAGCAAGCCCCAAGGCTGAGCCCATCTGGGAGCTCCCTACCCGTGCACCCAGGCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR-3UTR TCA 90 bp TTGCCGGGCATCTGGGTGTCCACCCGCCTCATTGGGCATGGCCCCGGCAAGTGTGCTGGAGGTGTCAGCTaGGGGTGCCACAGAGATGGT +
Preference number: 2 (lower is better)
Translates to: LPGIWVSTRLIGHGPGKCAGGVS*GCHRDG
Trigger: ACCATCTCTGTGGCACCCTCAGCTGACACCTCCAGC...ACACTTGCCGGGGCCATGCCCAATGAGGCGGGTGGACACCCAGATGCCCGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR-3UTR GCA 90 bp AGCTTGGAGACCGGAGGGAGGGCCCACAGGGCTGGAGGCGGGGCCTGTCAGCAGCTGCTTCTCTGTTTCTaGTGCCGCCACATTCTCCAG +
Preference number: 2 (lower is better)
Translates to: SLETGGRAHRAGGGACQQLLLCF*CRHILQ
Trigger: CTGGAGAATGTGGCGGCAGCAGAAACAGAGAAGCAG...CTGCTGACAGGCCCCGCCTCCAGCCCTGTGGGCCCTCCCTCCGGTCTCCAAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR-3UTR GCA 90 bp AGGTCCCCAATAGAGAGCCTGGGTGCACGGGTAGGGAGCTCCCAGATGGGCTCACTCCTTGGGCTCTGGTaGAAGGCTTCGCTGGGCCCG +
Preference number: 2 (lower is better)
Translates to: RSPIESLGARVGSSQMGSLLGLW*KASLGP
Trigger: CGGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAG...TGAGCCCATCTGGGAGCTCCCTACCCGTGCACCCAGGCTCTCTATTGGGGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR-3UTR GCA 90 bp AGAGAACGGCGGCTCCTCTTGCCCTCCTCAGAAGAAGGCTTTCGTCGTTCCCGCCGTCAGTGCCCGCAGTaGCCAGGTGGCGCTGGACCA +
Preference number: 2 (lower is better)
Translates to: RERRLLLPSSEEGFRRSRRQCPQ*PGGAGP
Trigger: TGGTCCAGCGCCACCTGGGCACTGCGGGCACTGACG...GCGGGAACGACGAAAGCCTTCTTCTGAGGAGGGCAAGAGGAGCCGCCGTTCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR-3UTR CCA 90 bp AAGTCCAGGTCCCCAATAGAGAGCCTGGGTGCACGGGTAGGGAGCTCCCAGATGGTCTCTGCCCGGCCCTaGGCCAGCGCAACCTGCTTC +
Preference number: 2 (lower is better)
Translates to: KSRSPIESLGARVGSSQMVSARP*ASATCF
Trigger: GAAGCAGGTTGCGCTGGCCCAGGGCCGGGCAGAGAC...CATCTGGGAGCTCCCTACCCGTGCACCCAGGCTCTCTATTGGGGACCTGGACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR-3UTR CCA 90 bp GTATCAGTGGCTCCTTGGGCTCTGGTGCAAGGCTTCGCTGGGCCCGGAGCAGGAGGCTCTGGGGTGTTCTaGCTGCAGGGGCTGTCTCTG +
Preference number: 2 (lower is better)
Translates to: VSVAPWALVQGFAGPGAGGSGVF*LQGLSL
Trigger: CAGAGACAGCCCCTGCAGCCAGAACACCCCAGAGCC...TCCTGCTCCGGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR-3UTR CCA 90 bp CGGCTGCCCGGCTCCGGCGCTCCAGCTGCCCCAGGTTCTCAGTCAGCTGTTCAAGCCGCTCTTCCTCCGTaGGCATCATGGTCAGTAGCT +
Preference number: 2 (lower is better)
Translates to: RLPGSGAPAAPGSQSAVQAALPP*ASWSVA
Trigger: AGCTACTGACCATGATGCCCACGGAGGAAGAGCGGC...TTGAACAGCTGACTGAGAACCTGGGGCAGCTGGAGCGCCGGAGCCGGGCAGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567561.1
3UTR-3UTR GCA 90 bp TCCACCCGCCTCATTGGGCATGGCCCCGGCAAGTGTCTCTGCCCGGCCCTGGGCCTTCTCTGTTTCTGCTaGCGCCACATTCTCCAGGAA +
Preference number: 2 (lower is better)
Translates to: STRLIGHGPGKCLCPALGLLCFC*RHILQE
Trigger: TTCCTGGAGAATGTGGCGGCAGCAGAAACAGAGAAG...GCCCAGGGCCGGGCAGAGACACTTGCCGGGGCCATGCCCAATGAGGCGGGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR-3UTR GCA 90 bp GGTGTTCCAGTCGGGCCGTGTCCACTGAGACAGGGTCCAGTGAAGCCCAGAGGGGAGGAGCACCGGTGGTaGTGGCCACAGAGTTCACTG +
Preference number: 2 (lower is better)
Translates to: GVPVGPCPLRQGPVKPRGEEHRW*WPQSSL
Trigger: CAGTGAACTCTGTGGCCAGCACCACCGGTGCTCCTC...CCCTCTGGGCTTCACTGGACCCTGTCTCAGTGGACACGGCCCGACTGGAACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR-3UTR CCA 90 bp CGCCCACCAGCGCCTGGGGCTTCTTCGATGTCTCCATCCTCCAATTTCAGGGCGCCGCCTCATTGGGCATaGCCCCGGCAAGTGTCTCTG +
Preference number: 2 (lower is better)
Translates to: RPPAPGASSMSPSSNFRAPPHWA*PRQVSL
Trigger: CAGAGACACTTGCCGGGGCCATGCCCAATGAGGCGG...CGCCCTGAAATTGGAGGATGGAGACATCGAAGAAGCCCCAGGCGCTGGTGGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR-3UTR CCA 90 bp TTGCCGGGCATCTGGGTGTCCACCCGCCTCATTGGGCATGGCCCCGGCAAGTGTGCTTGCTGGTATCAGTaGCTCCTTGGGCTCTGGTGC +
Preference number: 2 (lower is better)
Translates to: LPGIWVSTRLIGHGPGKCACWYQ*LLGLWC
Trigger: GCACCAGAGCCCAAGGAGCCACTGATACCAGCAAGC...ACACTTGCCGGGGCCATGCCCAATGAGGCGGGTGGACACCCAGATGCCCGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR-3UTR GCA 90 bp TTGCCGGGCATCTGGGTGTCCACCCGCCTCATTGGGCATGGCCCCGGCAAGTGTGCCCTGCTGCTCCAGTaGATCCGTCACATCGTAGAA +
Preference number: 2 (lower is better)
Translates to: LPGIWVSTRLIGHGPGKCALLLQ*IRHIVE
Trigger: TTCTACGATGTGACGGATGCACTGGAGCAGCAGGGC...ACACTTGCCGGGGCCATGCCCAATGAGGCGGGTGGACACCCAGATGCCCGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR-3UTR GCA 90 bp TGCCCGGCTCCGGCGCTCCAGCTGCCCCAGGTTCTCAGTCAGCTGTTCAAAGTCGCTTCCTCAATCTTCTaGCGCTCTTCCTCCGTGGGC +
Preference number: 2 (lower is better)
Translates to: CPAPALQLPQVLSQLFKVASSIF*RSSSVG
Trigger: GCCCACGGAGGAAGAGCGGCAGAAGATTGAGGAAGC...GACTTTGAACAGCTGACTGAGAACCTGGGGCAGCTGGAGCGCCGGAGCCGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567561.1
3UTR-3UTR CCA 90 bp TCCAGAGAACGGCGGCTCCTCTTGCCCTCCTCAGAAGAAGGCTTTCGTCGTTCCGTCCACCCGCCTCATTaGGCATGGCCCCGGCAAGTG +
Preference number: 2 (lower is better)
Translates to: SRERRLLLPSSEEGFRRSVHPPH*AWPRQV
Trigger: CACTTGCCGGGGCCATGCCCAATGAGGCGGGTGGAC...GGAACGACGAAAGCCTTCTTCTGAGGAGGGCAAGAGGAGCCGCCGTTCTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR-3UTR CCA 90 bp ATGGGCTCAGCCTTGGGGCTTGCTGGTATCAGTGGCTCCTTGGGCTCTGGTGCAGGCTCTGGGGTGTTCTaGCTGCAGGGGCTGTCTCTG +
Preference number: 2 (lower is better)
Translates to: MGSALGLAGISGSLGSGAGSGVF*LQGLSL
Trigger: CAGAGACAGCCCCTGCAGCCAGAACACCCCAGAGCC...TGCACCAGAGCCCAAGGAGCCACTGATACCAGCAAGCCCCAAGGCTGAGCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR-3UTR CCA 90 bp AGAGAACGGCGGCTCCTCTTGCCCTCCTCAGAAGAAGGCTTTCGTCGTTCCCGCTGGCTCCTTGGGCTCTaGTGCAAGGCTTCGCTGGGC +
Preference number: 2 (lower is better)
Translates to: RERRLLLPSSEEGFRRSRWLLGL*CKASLG
Trigger: GCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCA...GCGGGAACGACGAAAGCCTTCTTCTGAGGAGGGCAAGAGGAGCCGCCGTTCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR-3UTR CCA 90 bp CCCGGCTCCGGCGCTCCAGCTGCCCCAGGTTCTCAGTCAGCTGTTCAAAGTCCAGGGGTATGTCAGGGTTaGCCAGCTGGGCTTCCTCAA +
Preference number: 2 (lower is better)
Translates to: PGSGAPAAPGSQSAVQSPGVCQG*PAGLPQ
Trigger: TTGAGGAAGCCCAGCTGGCCAACCCTGACATACCCC...TGGACTTTGAACAGCTGACTGAGAACCTGGGGCAGCTGGAGCGCCGGAGCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567561.1
3UTR-3UTR TCA 90 bp GCCCAAAGCGGCTTGCAGAGACTCCATGGCCCCCAGCCAGCTTCAGCTCACGCCAGGAAAAAGGTTCACTaGAGCTTGGAGACCGGAGGG +
Preference number: 2 (lower is better)
Translates to: AQSGLQRLHGPQPASAHARKKVH*SLETGG
Trigger: CCCTCCGGTCTCCAAGCTTCAGTGAACCTTTTTCCT...GGCGTGAGCTGAAGCTGGCTGGGGGCCATGGAGTCTCTGCAAGCCGCTTTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR-3UTR GCA 90 bp AAAGTCCAGGTCCCCAATAGAGAGCCTGGGTGCACGGGTAGGGAGCTCCCAGATGGGGAGTCCCAGAGTTaGCGGGCATCTGGGTGTCCA +
Preference number: 2 (lower is better)
Translates to: KVQVPNREPGCTGRELPDGESQS*RASGCP
Trigger: TGGACACCCAGATGCCCGGCAACTCTGGGACTCCCC...ATCTGGGAGCTCCCTACCCGTGCACCCAGGCTCTCTATTGGGGACCTGGACTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR-3UTR CCA 90 bp AAAGTCCAGGTCCCCAATAGAGAGCCTGGGTGCACGGGTAGGGAGCTCCCAGATTGGCTCCTTGGGCTCTaGTGCAAGGCTTCGCTGGGC +
Preference number: 2 (lower is better)
Translates to: KVQVPNREPGCTGRELPDWLLGL*CKASLG
Trigger: GCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCA...ATCTGGGAGCTCCCTACCCGTGCACCCAGGCTCTCTATTGGGGACCTGGACTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR-3UTR CCA 90 bp GCTGGTATCAGTGGCTCCTTGGGCTCTGGTGCAAGGCTTCGCTGGGCCCGGAGCACAAAGAGCATCAGCTaGCCGAGCGCTCTAAGGATG +
Preference number: 2 (lower is better)
Translates to: AGISGSLGSGARLRWARSTKSIS*PSALRM
Trigger: CATCCTTAGAGCGCTCGGCCAGCTGATGCTCTTTGT...GCTCCGGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR-3UTR CCA 90 bp CATTCAGCATGTCCTGGTCTTCATCCTCCCCTAGATCTGAAAAGTCCAGGTCCCGCAGGGCGGGGCCGGTaGAAGAGGTGGGGCCTACCG +
Preference number: 2 (lower is better)
Translates to: HSACPGLHPPLDLKSPGPAGRGR*KRWGLP
Trigger: CGGTAGGCCCCACCTCTTCCACCGGCCCCGCCCTGC...GGGACCTGGACTTTTCAGATCTAGGGGAGGATGAAGACCAGGACATGCTGAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR CAA 90 bp AGAGTCATCAGGAAGTTCTCGGCTGGGCCCAGGGGTATGTCAGGGTaGGCCAGCTGGGCTTCCTCAATCTTCTGCCGCTCTTCCTCCGTG +
Preference number: 2 (lower is better)
Translates to: RVIRKFSAGPRGMSG*ASWASSIFCRSSSV
Trigger: CACGGAGGAAGAGCGGCAGAAGATTGAGGAAGCCCAGCTGGCCAACCCTGACATACCCCTGGGCCCAGCCGAGAACTTCCTGATGACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567561.1
3UTR-3UTR GCA 90 bp CAGCCTTGGGGCTTGCTGGTATCAGTGGCTCCTTGGGCTCTGGTGCAAGGCTTCTGGGCCAGCGCAACCTaGTTCTCTGTTTCTGCTGCC +
Preference number: 2 (lower is better)
Translates to: QPWGLLVSVAPWALVQGFWASAT*FSVSAA
Trigger: GGCAGCAGAAACAGAGAAGCAGGTTGCGCTGGCCCA...GAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACCAGCAAGCCCCAAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR-3UTR GCA 90 bp GGTGTTCCAGTCGGGCCGTGTCCACTGAGACAGGGTCCAGTGAAGCCCAGAGGGCTTCTCTGTTTCTGCTaGCGCCACATTCTCCAGGAA +
Preference number: 2 (lower is better)
Translates to: GVPVGPCPLRQGPVKPRGLLCFC*RHILQE
Trigger: TTCCTGGAGAATGTGGCGGCAGCAGAAACAGAGAAG...CCCTCTGGGCTTCACTGGACCCTGTCTCAGTGGACACGGCCCGACTGGAACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR-3UTR CCA 90 bp CTGGGCCAGCGCAACCTGCTTCTCTGTTTCTGCTGCCGCCACATTCTCCAGGAAAGCCTTGGGGCTTGCTaGTATCAGTGGCTCCTTGGG +
Preference number: 2 (lower is better)
Translates to: LGQRNLLLCFCCRHILQESLGAC*YQWLLG
Trigger: CCCAAGGAGCCACTGATACCAGCAAGCCCCAAGGCT...TTCCTGGAGAATGTGGCGGCAGCAGAAACAGAGAAGCAGGTTGCGCTGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR-3UTR CCA 90 bp GTAGACGAGCAGCGAGGCCGCCAATGGAGGCAAGAGTCATCAGGAAGTTCTCGGCAGCGAGGCCGCCAATaGAGGCAAGAGTCATCAGGA +
Preference number: 2 (lower is better)
Translates to: VDEQRGRQWRQESSGSSRQRGRQ*RQESSG
Trigger: TCCTGATGACTCTTGCCTCCATTGGCGGCCTCGCTG...CCGAGAACTTCCTGATGACTCTTGCCTCCATTGGCGGCCTCGCTGCTCGTCTAC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567509.1
ENST00000567561.1
3UTR-3UTR CCA 90 bp TCCAGAGAACGGCGGCTCCTCTTGCCCTCCTCAGAAGAAGGCTTTCGTCGTTCCCCAAGCGGGACAGGCTaGCACACAATGTGTACAGCC +
Preference number: 2 (lower is better)
Translates to: SRERRLLLPSSEEGFRRSPSGTG*HTMCTA
Trigger: GGCTGTACACATTGTGTGCCAGCCTGTCCCGCTTGG...GGAACGACGAAAGCCTTCTTCTGAGGAGGGCAAGAGGAGCCGCCGTTCTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR-3UTR CCA 90 bp GGGCTTTGTAGATGCTCCTCTCGCTGGAGGTGTCAGCTGAGGGTGCCACAGAGAGTATCAGTGGCTCCTTaGGCTCTGGTGCAAGGCTTC +
Preference number: 2 (lower is better)
Translates to: GLCRCSSRWRCQLRVPQRVSVAP*ALVQGF
Trigger: GAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATAC...TCTCTGTGGCACCCTCAGCTGACACCTCCAGCGAGAGGAGCATCTACAAAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR-3UTR TCA 90 bp CAGCCTTGGGGCTTGCTGGTATCAGTGGCTCCTTGGGCTCTGGTGCAAGGCTTCAATGTGTACAGCCACTaGATAGTGTCACTGTGGGCC +
Preference number: 2 (lower is better)
Translates to: QPWGLLVSVAPWALVQGFNVYSH*IVSLWA
Trigger: GGCCCACAGTGACACTATTCAGTGGCTGTACACATT...GAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACCAGCAAGCCCCAAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR-3UTR GCA 90 bp TCTGAAAAGTCCAGGTCCCCAATAGAGAGCCTGGGTGCACGGGTAGGGAGCTCCCTGCTTCTCTGTTTCTaGTGCCGCCACATTCTCCAG +
Preference number: 2 (lower is better)
Translates to: SEKSRSPIESLGARVGSSLLLCF*CRHILQ
Trigger: CTGGAGAATGTGGCGGCAGCAGAAACAGAGAAGCAG...GGAGCTCCCTACCCGTGCACCCAGGCTCTCTATTGGGGACCTGGACTTTTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR-3UTR GCA 90 bp CTGGGATGTCTTTCCCAGCCTCCACAGACTCTACATTCAGCATGTCCTGGTCTTGGGGAGTCCCAGAGTTaGCGGGCATCTGGGTGTCCA +
Preference number: 2 (lower is better)
Translates to: LGCLSQPPQTLHSACPGLGESQS*RASGCP
Trigger: TGGACACCCAGATGCCCGGCAACTCTGGGACTCCCC...AAGACCAGGACATGCTGAATGTAGAGTCTGTGGAGGCTGGGAAAGACATCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR-3UTR CCA 90 bp CATTCAGCATGTCCTGGTCTTCATCCTCCCCTAGATCTGAAAAGTCCAGGTCCCCCGCCTCATTGGGCATaGCCCCGGCAAGTGTCTCTG +
Preference number: 2 (lower is better)
Translates to: HSACPGLHPPLDLKSPGPPPHWA*PRQVSL
Trigger: CAGAGACACTTGCCGGGGCCATGCCCAATGAGGCGG...GGGACCTGGACTTTTCAGATCTAGGGGAGGATGAAGACCAGGACATGCTGAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR-3UTR CCA 90 bp ACATTCAGCATGTCCTGGTCTTCATCCTCCCCTAGATCTGAAAAGTCCAGGTCCCCGCCCACCAGCGCCTaGGGCTTCTTCGATGTCTCC +
Preference number: 2 (lower is better)
Translates to: TFSMSWSSSSPRSEKSRSPPTSA*GFFDVS
Trigger: GGAGACATCGAAGAAGCCCCAGGCGCTGGTGGGCGG...GGACCTGGACTTTTCAGATCTAGGGGAGGATGAAGACCAGGACATGCTGAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR-3UTR CCA 90 bp ACATTCAGCATGTCCTGGTCTTCATCCTCCCCTAGATCTGAAAAGTCCAGGTCCTGCAGGGGCTGTCTCTaGGGAGTCCCAGAGTTGCCG +
Preference number: 2 (lower is better)
Translates to: TFSMSWSSSSPRSEKSRSCRGCL*GVPELP
Trigger: CGGCAACTCTGGGACTCCCCAGAGACAGCCCCTGCA...GGACCTGGACTTTTCAGATCTAGGGGAGGATGAAGACCAGGACATGCTGAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR-3UTR CCA 90 bp CAGCTGTTCCATACCCACTTTCAGGTCAAACAGTGGCTCAGCAATTTCCCGCTCCAGGAAGTTCTCGGCTaGGCCCAGGGGTATGTCAGG +
Preference number: 2 (lower is better)
Translates to: QLFHTHFQVKQWLSNFPLQEVLG*AQGYVR
Trigger: CCTGACATACCCCTGGGCCCAGCCGAGAACTTCCTG...GAGCGGGAAATTGCTGAGCCACTGTTTGACCTGAAAGTGGGTATGGAACAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567509.1
ENST00000567561.1
3UTR-3UTR CCA 90 bp GTTCCATACCCACTTTCAGGTCAAACAGTGGCTCAGCAATTTCCCGCTCCATGCCAGGAAGTTCTCGGCTaGGCCCAGGGGTATGTCAGG +
Preference number: 2 (lower is better)
Translates to: VPYPLSGQTVAQQFPAPCQEVLG*AQGYVR
Trigger: CCTGACATACCCCTGGGCCCAGCCGAGAACTTCCTG...GCATGGAGCGGGAAATTGCTGAGCCACTGTTTGACCTGAAAGTGGGTATGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567509.1
ENST00000567561.1
3UTR-3UTR GCA 90 bp ACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGCTCCTGGGGCCAGAATTCTaGTCTGGGCCCTCCTCACTC +
Preference number: 2 (lower is better)
Translates to: THTLTCIHTRLILLKAWLLGPEF*SGPSSL
Trigger: GAGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAG...GAGCCATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
3UTR-3UTR GCA 90 bp AGGGAGCTGGGATGTCTTTCCCAGCCTCCACAGACTCTACATTCAGCATGTCCTCTCAGCCTTGGGGCTTaGTGGTATCAGTGGCTCCTT +
Preference number: 2 (lower is better)
Translates to: RELGCLSQPPQTLHSACPLSLGA*WYQWLL
Trigger: AAGGAGCCACTGATACCAGCAAGCCCCAAGGCTGAG...AGGACATGCTGAATGTAGAGTCTGTGGAGGCTGGGAAAGACATCCCAGCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR-3UTR GCA 90 bp TTCTGCTGCTGCTGTAGCACTCGTTCCCGGCAAGTCCGATACTCAAGCGCAAATAGCGTGTGGCAGAACTaGATGATGCGCACTTCACGG +
Preference number: 2 (lower is better)
Translates to: FCCCCSTRSRQVRYSSANSVWQN*MMRTSR
Trigger: CCGTGAAGTGCGCATCATGCAGTTCTGCCACACGCT...ATTTGCGCTTGAGTATCGGACTTGCCGGGAACGAGTGCTACAGCAGCAGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567561.1
3UTR-3UTR GCA 90 bp TTTCTGCTGCCGCCACATTCTCCAGGAACCGGGCTTTGTAGATGCTCCTCTCGCACGGATGAACAGCGGTaGGTTGTTTTCGGAGTATTC +
Preference number: 2 (lower is better)
Translates to: FLLPPHSPGTGLCRCSSRTDEQR*VVFGVF
Trigger: GAATACTCCGAAAACAACGCACCGCTGTTCATCCGT...GCGAGAGGAGCATCTACAAAGCCCGGTTCCTGGAGAATGTGGCGGCAGCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR-3UTR TCA 90 bp GGTGGCATTCTGTACCAGCTGTTCCATACCCACTTTCAGGTCAAACAGTGGCTCATGGTCAGTAGCTTCTaGGGATGTAGCCAGAGCCTG +
Preference number: 2 (lower is better)
Translates to: GGILYQLFHTHFQVKQWLMVSSF*GCSQSL
Trigger: CAGGCTCTGGCTACATCCTCAGAAGCTACTGACCAT...GAGCCACTGTTTGACCTGAAAGTGGGTATGGAACAGCTGGTACAGAATGCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567561.1
3UTR-3UTR CCA 90 bp ACATTCAGCATGTCCTGGTCTTCATCCTCCCCTAGATCTGAAAAGTCCAGGTCCAGATGGGCTCAGCCTTaGGGCTTGCTGGTATCAGTG +
Preference number: 2 (lower is better)
Translates to: TFSMSWSSSSPRSEKSRSRWAQP*GLLVSV
Trigger: CACTGATACCAGCAAGCCCCAAGGCTGAGCCCATCT...GGACCTGGACTTTTCAGATCTAGGGGAGGATGAAGACCAGGACATGCTGAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR-3UTR CCA 90 bp TTCTGCTGCTGCTGTAGCACTCGTTCCCGGCAAGTCCGATACTCAAGCGCAAATTTTCAGGTCAAACAGTaGCTCAGCAATTTCCCGCTC +
Preference number: 2 (lower is better)
Translates to: FCCCCSTRSRQVRYSSANFQVKQ*LSNFPL
Trigger: GAGCGGGAAATTGCTGAGCCACTGTTTGACCTGAAA...ATTTGCGCTTGAGTATCGGACTTGCCGGGAACGAGTGCTACAGCAGCAGCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567561.1
3UTR-3UTR TCA 90 bp TACCAGCTGTTCCATACCCACTTTCAGGTCAAACAGTGGCTCAGCAATTTCCCGTGTCATAGTCCAGCTTaGAGGCCCAGAGTTGTAGAC +
Preference number: 2 (lower is better)
Translates to: YQLFHTHFQVKQWLSNFPCHSPA*RPRVVD
Trigger: GTCTACAACTCTGGGCCTTCAAGCTGGACTATGACA...CGGGAAATTGCTGAGCCACTGTTTGACCTGAAAGTGGGTATGGAACAGCTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567509.1
ENST00000567561.1
3UTR CCA 72 bp GCCGGGCATCTGGGTGTCCACCCGCCTCATTGGGCATaGCCCCGGCAAGTGTCTCTGCCCGGCCCTGGGCCA +
Preference number: 3 (lower is better)
Translates to: AGHLGVHPPHWA*PRQVSLPGPGP
Trigger: TGGCCCAGGGCCGGGCAGAGACACTTGCCGGGGCCATGCCCAATGAGGCGGGTGGACACCCAGATGCCCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR CCA 72 bp GTGCGCAGGTCGACGTCAGTGCCCGCAGTGCCCAGGTaGCGCTGGACCAGCGCTTCCATGCCCTGCTGCTCC +
Preference number: 3 (lower is better)
Translates to: VRRSTSVPAVPR*RWTSASMPCCS
Trigger: GGAGCAGCAGGGCATGGAAGCGCTGGTCCAGCGCCACCTGGGCACTGCGGGCACTGACGTCGACCTGCGCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR CCA 72 bp AGAGTTGCCGGGCATCTGGGTGTCCACCCGCCTCATTaGGCATGGCCCCGGCAAGTGTCTCTGCCCGGCCCT +
Preference number: 3 (lower is better)
Translates to: RVAGHLGVHPPH*AWPRQVSLPGP
Trigger: AGGGCCGGGCAGAGACACTTGCCGGGGCCATGCCCAATGAGGCGGGTGGACACCCAGATGCCCGGCAACTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR CCA 72 bp ATCAGTGGCTCCTTGGGCTCTGGTGCAAGGCTTCGCTaGGCCCGGAGCAGGACACAGGGGGCAGGGCTCTGG +
Preference number: 3 (lower is better)
Translates to: ISGSLGSGARLR*ARSRTQGAGLW
Trigger: CCAGAGCCCTGCCCCCTGTGTCCTGCTCCGGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR CCA 72 bp AGGTCGACGTCAGTGCCCGCAGTGCCCAGGTGGCGCTaGACCAGCGCTTCCATGCCCTGCTGCTCCAGTGCA +
Preference number: 3 (lower is better)
Translates to: RSTSVPAVPRWR*TSASMPCCSSA
Trigger: TGCACTGGAGCAGCAGGGCATGGAAGCGCTGGTCCAGCGCCACCTGGGCACTGCGGGCACTGACGTCGACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR GCA 72 bp GGCAGCCCCCGCCTTCCAGAGAACGGCGGCTCCTCTTaGCCTCCTCAGAAGAAGGCTTTCGTCGTTCCCGCC +
Preference number: 3 (lower is better)
Translates to: GSPRLPENGGSS*PPQKKAFVVPA
Trigger: GGCGGGAACGACGAAAGCCTTCTTCTGAGGAGGGCAAGAGGAGCCGCCGTTCTCTGGAAGGCGGGGGCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR GCA 72 bp AGGCTCTCCTCGGCTGCCCGGCTCCGGCGCTCCAGCTaGCCCAGGTTCTCAGTCAGCTGTTCAAAGTCCACC +
Preference number: 3 (lower is better)
Translates to: RLSSAARLRRSS*PRFSVSCSKST
Trigger: GGTGGACTTTGAACAGCTGACTGAGAACCTGGGGCAGCTGGAGCGCCGGAGCCGGGCAGCCGAGGAGAGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567561.1
3UTR CCA 72 bp TTGGGCATGGCCCCGGCAAGTGTCTCTGCCCGGCCCTaGGCCAGCGCAACCTGCTTCTCTGTTTCTGCTGCC +
Preference number: 3 (lower is better)
Translates to: LGMAPASVSARP*ASATCFSVSAA
Trigger: GGCAGCAGAAACAGAGAAGCAGGTTGCGCTGGCCCAGGGCCGGGCAGAGACACTTGCCGGGGCCATGCCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR-3UTR CAA 90 bp AGAGGGTGGCGCAGGGCCCAAAGCGGCTTGCAGAGACTCCATGGCCCCCAGCCAGCTCAGCCTTGGGGCTaGCTGGTATCAGTGGCTCCT +
Preference number: 3 (lower is better)
Translates to: RGWRRAQSGLQRLHGPQPAQPWG*LVSVAP
Trigger: AGGAGCCACTGATACCAGCAAGCCCCAAGGCTGAGC...TGGCTGGGGGCCATGGAGTCTCTGCAAGCCGCTTTGGGCCCTGCGCCACCCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR-3UTR CAA 90 bp GGTGTTCCAGTCGGGCCGTGTCCACTGAGACAGGGTCCAGTGAAGCCCAGAGGGAGGGCCCAAAGCGGCTaGCAGAGACTCCATGGCCCC +
Preference number: 3 (lower is better)
Translates to: GVPVGPCPLRQGPVKPRGRAQSG*QRLHGP
Trigger: GGGGCCATGGAGTCTCTGCAAGCCGCTTTGGGCCCT...CCCTCTGGGCTTCACTGGACCCTGTCTCAGTGGACACGGCCCGACTGGAACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR GCA 72 bp CCGCAGTGCCCAGGTGGCGCTGGACCAGCGCTTCCATaGCCTGCTGCTCCAGTGCATCCGTCACATCGTAGA +
Preference number: 3 (lower is better)
Translates to: PQCPGGAGPALP*PAAPVHPSHRR
Trigger: TCTACGATGTGACGGATGCACTGGAGCAGCAGGGCATGGAAGCGCTGGTCCAGCGCCACCTGGGCACTGCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR CCA 72 bp GCTCAGCCTTGGGGCTTGCTGGTATCAGTGGCTCCTTaGGCTCTGGTGCAAGGCTTCGCTGGGCCCGGAGCA +
Preference number: 3 (lower is better)
Translates to: AQPWGLLVSVAP*ALVQGFAGPGA
Trigger: TGCTCCGGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACCAGCAAGCCCCAAGGCTGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR GCA 72 bp GCAAGTGTCTCTGCCCGGCCCTGGGCCAGCGCAACCTaGTTCTCTGTTTCTGCTGCCGCCACATTCTCCAGG +
Preference number: 3 (lower is better)
Translates to: ASVSARPWASAT*FSVSAAATFSR
Trigger: CCTGGAGAATGTGGCGGCAGCAGAAACAGAGAAGCAGGTTGCGCTGGCCCAGGGCCGGGCAGAGACACTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR GCA 72 bp GCGCTGGACCAGCGCTTCCATGCCCTGCTGCTCCAGTaGATCCGTCACATCGTAGAAGGAGTCCTGGTCCGG +
Preference number: 3 (lower is better)
Translates to: ALDQRFHALLLQ*IRHIVEGVLVR
Trigger: CCGGACCAGGACTCCTTCTACGATGTGACGGATGCACTGGAGCAGCAGGGCATGGAAGCGCTGGTCCAGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR CCA 72 bp CTTGGGGCTTGCTGGTATCAGTGGCTCCTTGGGCTCTaGTGCAAGGCTTCGCTGGGCCCGGAGCAGGACACA +
Preference number: 3 (lower is better)
Translates to: LGACWYQWLLGL*CKASLGPEQDT
Trigger: TGTGTCCTGCTCCGGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACCAGCAAGCCCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR CCA 72 bp CCAGATGGGCTCAGCCTTGGGGCTTGCTGGTATCAGTaGCTCCTTGGGCTCTGGTGCAAGGCTTCGCTGGGC +
Preference number: 3 (lower is better)
Translates to: PDGLSLGACWYQ*LLGLWCKASLG
Trigger: GCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACCAGCAAGCCCCAAGGCTGAGCCCATCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR CCA 72 bp GTGGCGCAGGGCCCAAAGCGGCTTGCAGAGACTCCATaGCCCCCAGCCAGCTTCAGCTCACGCCAGAAAAGT +
Preference number: 3 (lower is better)
Translates to: VAQGPKRLAETP*PPASFSSRQKS
Trigger: ACTTTTCTGGCGTGAGCTGAAGCTGGCTGGGGGCCATGGAGTCTCTGCAAGCCGCTTTGGGCCCTGCGCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR-3UTR CAA 90 bp AGCGGCTTGCAGAGACTCCATGGCCCCCAGCCAGCTTCAGCTCACGCCAGAAAATGTCCACCCGCCTCATaGGGCATGGCCCCGGCAAGT +
Preference number: 3 (lower is better)
Translates to: SGLQRLHGPQPASAHARKCPPAS*GMAPAS
Trigger: ACTTGCCGGGGCCATGCCCAATGAGGCGGGTGGACA...TTTTCTGGCGTGAGCTGAAGCTGGCTGGGGGCCATGGAGTCTCTGCAAGCCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR GCA 72 bp GGTAGGGAGCTCCCAGATGGGCTCAGCCTTGGGGCTTaGTGGTATCAGTGGCTCCTTGGGCTCTGGTGCAAG +
Preference number: 3 (lower is better)
Translates to: GRELPDGLSLGA*WYQWLLGLWCK
Trigger: CTTGCACCAGAGCCCAAGGAGCCACTGATACCAGCAAGCCCCAAGGCTGAGCCCATCTGGGAGCTCCCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR GCA 72 bp CCAATTTCAGGGCGTTCTCGTAGAGCACAAGCTGCGTaGGCAGGTCGACGTCAGTGCCCGCAGTGCCCAGGT +
Preference number: 3 (lower is better)
Translates to: PISGRSRRAQAA*AGRRQCPQCPG
Trigger: ACCTGGGCACTGCGGGCACTGACGTCGACCTGCGCACGCAGCTTGTGCTCTACGAGAACGCCCTGAAATTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR GCA 72 bp CCGGCCCTGGGCCAGCGCAACCTGCTTCTCTGTTTCTaGTGCCGCCACATTCTCCAGGAACCGGGCTTTGTA +
Preference number: 3 (lower is better)
Translates to: PALGQRNLLLCF*CRHILQEPGFV
Trigger: TACAAAGCCCGGTTCCTGGAGAATGTGGCGGCAGCAGAAACAGAGAAGCAGGTTGCGCTGGCCCAGGGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR GCA 72 bp TACTCAAGCGCAAATTCCCGCAGCGTGTGGCAGAACTaGATGATGCGCACTTCACGGGCCGCCTGCGGGGTG +
Preference number: 3 (lower is better)
Translates to: YSSANSRSVWQN*MMRTSRAACGV
Trigger: CACCCCGCAGGCGGCCCGTGAAGTGCGCATCATGCAGTTCTGCCACACGCTGCGGGAATTTGCGCTTGAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567561.1
3UTR CCA 72 bp TGTCCACTGAGACAGGGTCCAGTGAAGCCCAGAGGGTaGCGCAGGGCCCAAAGCGGCTTGCAGAGACTCCAT +
Preference number: 3 (lower is better)
Translates to: CPLRQGPVKPRG*RRAQSGLQRLH
Trigger: ATGGAGTCTCTGCAAGCCGCTTTGGGCCCTGCGCCACCCTCTGGGCTTCACTGGACCCTGTCTCAGTGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR-3UTR CAA 90 bp GTAGGAAAAAGGTTCACTGAAGCTTGGAGACCGGAGGGAGGGCCCACAGGGCTGAGCGCCGCCAGCGTCTaGTTGATGAGGGTGACCGTG +
Preference number: 3 (lower is better)
Translates to: VGKRFTEAWRPEGGPTGLSAASV*LMRVTV
Trigger: CACGGTCACCCTCATCAACAAGACGCTGGCGGCGCT...CAGCCCTGTGGGCCCTCCCTCCGGTCTCCAAGCTTCAGTGAACCTTTTTCCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR GCA 72 bp CGGGTCTTGTTGCGCTCACGGTATGTGGCCTGCTTCTaGTGCTGCTGTAGCACTCGTTCCCGGCAAGTCCGA +
Preference number: 3 (lower is better)
Translates to: RVLLRSRYVACF*CCCSTRSRQVR
Trigger: TCGGACTTGCCGGGAACGAGTGCTACAGCAGCAGCAGAAGCAGGCCACATACCGTGAGCGCAACAAGACCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567561.1
3UTR CCA 72 bp AGGCCCAGAGTTGTAGACGAGCAGCGAGGCCGCCAATaGAGGCAAGAGTCATCAGGAAGTTCTCGGCTGGGC +
Preference number: 3 (lower is better)
Translates to: RPRVVDEQRGRQ*RQESSGSSRLG
Trigger: GCCCAGCCGAGAACTTCCTGATGACTCTTGCCTCCATTGGCGGCCTCGCTGCTCGTCTACAACTCTGGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567509.1
ENST00000567561.1
3UTR CCA 72 bp GCCACAGAGATGGTAGGAAAAAGGTTCACTGAAGCTTaGAGACCGGAGGGAGGGCCCACAGGGCTGGAGGCG +
Preference number: 3 (lower is better)
Translates to: ATEMVGKRFTEA*RPEGGPTGLEA
Trigger: CGCCTCCAGCCCTGTGGGCCCTCCCTCCGGTCTCCAAGCTTCAGTGAACCTTTTTCCTACCATCTCTGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR CCA 72 bp AGAAGGCTTTCGTCGTTCCCGCCGCCCACCAGCGCCTaGGGCTTCTTCGATGTCTCCATCCTCCAATTTCAG +
Preference number: 3 (lower is better)
Translates to: RRLSSFPPPTSA*GFFDVSILQFQ
Trigger: CTGAAATTGGAGGATGGAGACATCGAAGAAGCCCCAGGCGCTGGTGGGCGGCGGGAACGACGAAAGCCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR CCA 72 bp ACCTATTGCAGACACGGCGGTGCACTATCCTTAGCATaGCAACACGGCGGGCACACTGGTCCAGGAAGTGGG +
Preference number: 3 (lower is better)
Translates to: TYCRHGGALSLA*QHGGHTGPGSG
Trigger: CCCACTTCCTGGACCAGTGTGCCCGCCGTGTTGCCATGCTAAGGATAGTGCACCGCCGTGTCTGCAATAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567561.1
3UTR CCA 72 bp CAAGTCCGATACTCAAGCGCAAATTCCCGCAGCGTGTaGCAGAACTGCATGATGCGCACTTCACGGGCCGCC +
Preference number: 3 (lower is better)
Translates to: QVRYSSANSRSV*QNCMMRTSRAA
Trigger: GGCGGCCCGTGAAGTGCGCATCATGCAGTTCTGCCACACGCTGCGGGAATTTGCGCTTGAGTATCGGACTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567561.1
3UTR-3UTR CAA 90 bp AAATTCCCGCAGCGTGTGGCAGAACTGCATGATGCGCACTTCACGGGCCGCCTGAAGGCATGGAACCTATaGCAGACACGGCGGTGCACT +
Preference number: 3 (lower is better)
Translates to: KFPQRVAELHDAHFTGRLKAWNL*QTRRCT
Trigger: AGTGCACCGCCGTGTCTGCAATAGGTTCCATGCCTT...CAGGCGGCCCGTGAAGTGCGCATCATGCAGTTCTGCCACACGCTGCGGGAATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567561.1
3UTR TCA 72 bp CAGCAATTTCCCGCTCCATGCTGTCATAGTCCAGCTTaGAGGCCCAGAGTTGTAGACGAGCAGCGAGGCCGC +
Preference number: 3 (lower is better)
Translates to: QQFPAPCCHSPA*RPRVVDEQRGR
Trigger: GCGGCCTCGCTGCTCGTCTACAACTCTGGGCCTTCAAGCTGGACTATGACAGCATGGAGCGGGAAATTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567509.1
ENST00000567561.1
3UTR GCA 72 bp AGCAGGAAGGCATGGAACCTATTGCAGACACGGCGGTaGACTATCCTTAGCATGGCAACACGGCGGGCACAC +
Preference number: 3 (lower is better)
Translates to: SRKAWNLLQTRR*TILSMATRRAH
Trigger: GTGTGCCCGCCGTGTTGCCATGCTAAGGATAGTGCACCGCCGTGTCTGCAATAGGTTCCATGCCTTCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567561.1
3UTR GCA 72 bp GTCTTGTTGCGCTCACGGTATGTGGCCTGCTTCTGCTaGTGCTGTAGCACTCGTTCCCGGCAAGTCCGATAC +
Preference number: 3 (lower is better)
Translates to: VLLRSRYVACFC*CCSTRSRQVRY
Trigger: GTATCGGACTTGCCGGGAACGAGTGCTACAGCAGCAGCAGAAGCAGGCCACATACCGTGAGCGCAACAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567561.1
3UTR-3UTR CAA 90 bp GAGGGAGCTGGGATGTCTTTCCCAGCCTCCACAGACTCTACATTCAGCATGTCCCAGATGGGCTCAGCCTaGGGGCTTGCTGGTATCAGT +
Preference number: 3 (lower is better)
Translates to: EGAGMSFPASTDSTFSMSQMGSA*GLAGIS
Trigger: ACTGATACCAGCAAGCCCCAAGGCTGAGCCCATCTG...GGACATGCTGAATGTAGAGTCTGTGGAGGCTGGGAAAGACATCCCAGCTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR TCA 72 bp AAGCGGGACAGGCTGGCACACAATGTGTACAGCCACTaGATAGTGTCACTGTGGGCCACCACCCCCAGCATT +
Preference number: 3 (lower is better)
Translates to: KRDRLAHNVYSH*IVSLWATTPSI
Trigger: AATGCTGGGGGTGGTGGCCCACAGTGACACTATTCAGTGGCTGTACACATTGTGTGCCAGCCTGTCCCGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR GCA 72 bp TTGTTGCGCTCACGGTATGTGGCCTGCTTCTGCTGCTaGTGTAGCACTCGTTCCCGGCAAGTCCGATACTCA +
Preference number: 3 (lower is better)
Translates to: LLRSRYVACFCC*CSTRSRQVRYS
Trigger: TGAGTATCGGACTTGCCGGGAACGAGTGCTACAGCAGCAGCAGAAGCAGGCCACATACCGTGAGCGCAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567561.1
3UTR-3UTR CAA 90 bp AGCTGGGATGTCTTTCCCAGCCTCCACAGACTCTACATTCAGCATGTCCTGGTCGGTATCAGTGGCTCCTaGGGCTCTGGTGCAAGGCTT +
Preference number: 3 (lower is better)
Translates to: SWDVFPSLHRLYIQHVLVGISGS*GSGARL
Trigger: AAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACC...GACCAGGACATGCTGAATGTAGAGTCTGTGGAGGCTGGGAAAGACATCCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR TCA 72 bp GGCTTTGTAGATGCTCCTCTCGCTGGAGGTGTCAGCTaGGGGTGCCACAGAGATGGTAGGAAAAAGGTTCAC +
Preference number: 3 (lower is better)
Translates to: GFVDAPLAGGVS*GCHRDGRKKVH
Trigger: GTGAACCTTTTTCCTACCATCTCTGTGGCACCCTCAGCTGACACCTCCAGCGAGAGGAGCATCTACAAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR CCA 72 bp ACATGCATACACACACGGCTAATACTGCTCAAGGCATaGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCT +
Preference number: 3 (lower is better)
Translates to: TCIHTRLILLKA*LLGTEFWGQNS
Trigger: AGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCCATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
3UTR CCA 72 bp TTCCCAGCCTCCACAGACTCTACATTCAGCATGTCCTaGTCTTCATCCTCCCCTAGATCTGAAAAGTCCAGG +
Preference number: 3 (lower is better)
Translates to: FPASTDSTFSMS*SSSSPRSEKSR
Trigger: CCTGGACTTTTCAGATCTAGGGGAGGATGAAGACCAGGACATGCTGAATGTAGAGTCTGTGGAGGCTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR GCA 72 bp TGCTCCGTGCGTTCAAGGAGCTCACACACATGCACATaGATATGCATGCACACACACACATACACACACACT +
Preference number: 3 (lower is better)
Translates to: CSVRSRSSHTCT*ICMHTHTYTHT
Trigger: AGTGTGTGTGTATGTGTGTGTGTGCATGCATATGCATGTGCATGTGTGTGAGCTCCTTGAACGCACGGAGCA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
3UTR CCA 72 bp TACCAGCTGTTCCATACCCACTTTCAGGTCAAACAGTaGCTCAGCAATTTCCCGCTCCATGCTGTCATAGTC +
Preference number: 3 (lower is better)
Translates to: YQLFHTHFQVKQ*LSNFPLHAVIV
Trigger: GACTATGACAGCATGGAGCGGGAAATTGCTGAGCCACTGTTTGACCTGAAAGTGGGTATGGAACAGCTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567509.1
ENST00000567561.1
3UTR GCA 72 bp TATGCATGCACACACACACATACACACACACTCACATaGATACACACACGGCTAATACTGCTCAAGGCATGG +
Preference number: 3 (lower is better)
Translates to: YACTHTHTHTLT*IHTRLILLKAW
Trigger: CCATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGTATGTGTGTGTGTGCATGCATA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
3UTR GCA 72 bp TTATTTTGCTCCGTGCGTTCAAGGAGCTCACACACATaGACATGCATATGCATGCACACACACACATACACA +
Preference number: 3 (lower is better)
Translates to: LFCSVRSRSSHT*TCICMHTHTYT
Trigger: TGTGTATGTGTGTGTGTGCATGCATATGCATGTGCATGTGTGTGAGCTCCTTGAACGCACGGAGCAAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
3UTR CAA 72 bp GTGAGGCGGGCACGCAGGGCTGGGGCCAGCTCATGCTaGGCCAAGCTCCGCAGGCTCTCCTCGGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: VRRARRAGASSC*AKLRRLSSAAR
Trigger: CCGGGCAGCCGAGGAGAGCCTGCGGAGCTTGGCCAAGCATGAGCTGGCCCCAGCCCTGCGTGCCCGCCTCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567561.1
CDS-3UTR GCA 90 bp AGCTTGGAGACCGGAGGGAGGGCCCACAGGGCTGGAGGCGGGGCCTGTCAGCAGTGCACCGCGGGTATCTaGGCGCCCAAGGGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: SLETGGRAHRAGGGACQQCTAGI*APKGSA
Trigger: GGCGCTGCCCTTGGGCGCGCAGATACCCGCGGTGCA...CTGCTGACAGGCCCCGCCTCCAGCCCTGTGGGCCCTCCCTCCGGTCTCCAAGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR CCA 90 bp AGGGGCTGTCTCTGGGGAGTCCCAGAGTTGCCGGGCATCTGGGTGTCCACCCGCCTTCCCCGCCCGCCATaGCTCTGCGGCCGGCTCACG +
Preference number: 4 (lower is better)
Translates to: RGCLWGVPELPGIWVSTRLPRPP*LCGRLT
Trigger: CGTGAGCCGGCCGCAGAGCCATGGCGGGCGGGGAAG...GCGGGTGGACACCCAGATGCCCGGCAACTCTGGGACTCCCCAGAGACAGCCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR CCA 90 bp AGTCGGGCCGTGTCCACTGAGACAGGGTCCAGTGAAGCCCAGAGGGTGGCGCAGGCAGGGCGGGGCCGGTaGAAGAGGTGGGGCCTACCG +
Preference number: 4 (lower is better)
Translates to: SRAVSTETGSSEAQRVAQAGRGR*KRWGLP
Trigger: CGGTAGGCCCCACCTCTTCCACCGGCCCCGCCCTGC...CTGCGCCACCCTCTGGGCTTCACTGGACCCTGTCTCAGTGGACACGGCCCGACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR GCA 90 bp GGTGTCCACCCGCCTCATTGGGCATGGCCCCGGCAAGTGTCTCTGCCCGGCCCTCTCCTTGGGCTCTGGTaGAAGGCTTCGCTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: GVHPPHWAWPRQVSLPGPLLGLW*KASLGP
Trigger: CGGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAG...AGGGCCGGGCAGAGACACTTGCCGGGGCCATGCCCAATGAGGCGGGTGGACACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR CCA 90 bp TGCAGGGGCTGTCTCTGGGGAGTCCCAGAGTTGCCGGGCATCTGGGTGTCCACCGAGGGCCCACAGGGCTaGAGGCGGGGCCTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: CRGCLWGVPELPGIWVSTEGPQG*RRGLSA
Trigger: TGCTGACAGGCCCCGCCTCCAGCCCTGTGGGCCCTC...GGTGGACACCCAGATGCCCGGCAACTCTGGGACTCCCCAGAGACAGCCCCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR CAA 72 bp CAGAGTTGCCGGGCATCTGGGTGTCCACCCGCCTCATaGGGCATGGCCCCGGCAAGTGTCTCTGCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: QSCRASGCPPAS*GMAPASVSARP
Trigger: GGGCCGGGCAGAGACACTTGCCGGGGCCATGCCCAATGAGGCGGGTGGACACCCAGATGCCCGGCAACTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR CCA 90 bp CACCCGCCTCATTGGGCATGGCCCCGGCAAGTGTCTCTGCCCGGCCCTGGGCCAGAGTTGCCGGGCATCTaGGTGTCCACCCGCCTCATT +
Preference number: 4 (lower is better)
Translates to: HPPHWAWPRQVSLPGPGPELPGI*VSTRLI
Trigger: AATGAGGCGGGTGGACACCCAGATGCCCGGCAACTC...TGGCCCAGGGCCGGGCAGAGACACTTGCCGGGGCCATGCCCAATGAGGCGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR CCA 90 bp CCTCATTGGGCATGGCCCCGGCAAGTGTCTCTGCCCGGCCCTGGGCCAGCGCAAGGCTCTGGGGTGTTCTaGCTGCAGGGGCTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: PHWAWPRQVSLPGPGPAQGSGVF*LQGLSL
Trigger: CAGAGACAGCCCCTGCAGCCAGAACACCCCAGAGCC...TTGCGCTGGCCCAGGGCCGGGCAGAGACACTTGCCGGGGCCATGCCCAATGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR CCA 90 bp TGCCGGGCATCTGGGTGTCCACCCGCCTCATTGGGCATGGCCCCGGCAAGTGTCGGTGCAAGGCTTCGCTaGGCCCGGAGCAGGACACAG +
Preference number: 4 (lower is better)
Translates to: CRASGCPPASLGMAPASVGARLR*ARSRTQ
Trigger: CTGTGTCCTGCTCCGGGCCCAGCGAAGCCTTGCACC...GACACTTGCCGGGGCCATGCCCAATGAGGCGGGTGGACACCCAGATGCCCGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR TCA 90 bp GGTGTCCACCCGCCTCATTGGGCATGGCCCCGGCAAGTGTCTCTGCCCGGCCCTGCTGGAGGTGTCAGCTaGGGGTGCCACAGAGATGGT +
Preference number: 4 (lower is better)
Translates to: GVHPPHWAWPRQVSLPGPAGGVS*GCHRDG
Trigger: ACCATCTCTGTGGCACCCTCAGCTGACACCTCCAGC...AGGGCCGGGCAGAGACACTTGCCGGGGCCATGCCCAATGAGGCGGGTGGACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR TCA 90 bp CCTCATTGGGCATGGCCCCGGCAAGTGTCTCTGCCCGGCCCTGGGCCAGCGCAAGCTGGAGGTGTCAGCTaGGGGTGCCACAGAGATGGT +
Preference number: 4 (lower is better)
Translates to: PHWAWPRQVSLPGPGPAQAGGVS*GCHRDG
Trigger: ACCATCTCTGTGGCACCCTCAGCTGACACCTCCAGC...TTGCGCTGGCCCAGGGCCGGGCAGAGACACTTGCCGGGGCCATGCCCAATGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR GCA 90 bp AGGCATGGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCGCTCCCAGCAGGCGGTaGACCGCGGGTATCTGCGCG +
Preference number: 4 (lower is better)
Translates to: RHGSWAQSSGARILLWALAPSRR*TAGICA
Trigger: CGCGCAGATACCCGCGGTGCACCGCCTGCTGGGAGC...GAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCCATGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp GGTGTCCACCCGCCTCATTGGGCATGGCCCCGGCAAGTGTCTCTGCCCGGCCCTGAGGAGCACCGGTGGTaGTGGCCACAGAGTTCACTG +
Preference number: 4 (lower is better)
Translates to: GVHPPHWAWPRQVSLPGPEEHRW*WPQSSL
Trigger: CAGTGAACTCTGTGGCCAGCACCACCGGTGCTCCTC...AGGGCCGGGCAGAGACACTTGCCGGGGCCATGCCCAATGAGGCGGGTGGACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR GCA 90 bp GCTGGTATCAGTGGCTCCTTGGGCTCTGGTGCAAGGCTTCGCTGGGCCCGGAGCGGGCCCAAAGCGGCTTaGAGAGACTCCATGGCCCCC +
Preference number: 4 (lower is better)
Translates to: AGISGSLGSGARLRWARSGPKAA*RDSMAP
Trigger: GGGGGCCATGGAGTCTCTGCAAGCCGCTTTGGGCCC...GCTCCGGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR CCA 90 bp AGGCATGGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCCCGCAGTGCCCAGGTaGCGCTGGACCAGCGCTTCC +
Preference number: 4 (lower is better)
Translates to: RHGSWAQSSGARILLWALPAVPR*RWTSAS
Trigger: GGAAGCGCTGGTCCAGCGCCACCTGGGCACTGCGGG...GAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCCATGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp CCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTCTGTGCAGGGCGGGGCCGGTaGAAGAGGTGGGGCCTACCG +
Preference number: 4 (lower is better)
Translates to: PGHRVLGPEFCSGPSSLCAGRGR*KRWGLP
Trigger: CGGTAGGCCCCACCTCTTCCACCGGCCCCGCCCTGC...ACAGAGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp CACCCGCCTCATTGGGCATGGCCCCGGCAAGTGTCTCTGCCCGGCCCTGGGCCAAGATGCTCCTCTCGCTaGAGGTGTCAGCTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: HPPHWAWPRQVSLPGPGPRCSSR*RCQLRV
Trigger: CACCCTCAGCTGACACCTCCAGCGAGAGGAGCATCT...TGGCCCAGGGCCGGGCAGAGACACTTGCCGGGGCCATGCCCAATGAGGCGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR CCA 90 bp TGGTATCAGTGGCTCCTTGGGCTCTGGTGCAAGGCTTCGCTGGGCCCGGAGCAGGTCTCTGCCCGGCCCTaGGCCAGCGCAACCTGCTTC +
Preference number: 4 (lower is better)
Translates to: WYQWLLGLWCKASLGPEQVSARP*ASATCF
Trigger: GAAGCAGGTTGCGCTGGCCCAGGGCCGGGCAGAGAC...CTGCTCCGGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR CCA 90 bp GGTATCAGTGGCTCCTTGGGCTCTGGTGCAAGGCTTCGCTGGGCCCGGAGCAGGGTCCACCCGCCTCATTaGGCATGGCCCCGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: GISGSLGSGARLRWARSRVHPPH*AWPRQV
Trigger: CACTTGCCGGGGCCATGCCCAATGAGGCGGGTGGAC...CCTGCTCCGGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR CCA 90 bp GGTATCAGTGGCTCCTTGGGCTCTGGTGCAAGGCTTCGCTGGGCCCGGAGCAGGGGTGCAAGGCTTCGCTaGGCCCGGAGCAGGACACAG +
Preference number: 4 (lower is better)
Translates to: GISGSLGSGARLRWARSRGARLR*ARSRTQ
Trigger: CTGTGTCCTGCTCCGGGCCCAGCGAAGCCTTGCACC...CCTGCTCCGGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR CAA 72 bp GGCTCAGCCTTGGGGCTTGCTGGTATCAGTGGCTCCTaGGGCTCTGGTGCAAGGCTTCGCTGGGCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: GSALGLAGISGS*GSGARLRWARS
Trigger: GCTCCGGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACCAGCAAGCCCCAAGGCTGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
3UTR CAA 72 bp GGGCAGCCCCCGCCTTCCAGAGAACGGCGGCTCCTCTaGCCCTCCTCAGAAGAAGGCTTTCGTCGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: GQPPPSRERRLL*PSSEEGFRRSR
Trigger: GCGGGAACGACGAAAGCCTTCTTCTGAGGAGGGCAAGAGGAGCCGCCGTTCTCTGGAAGGCGGGGGCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR GCA 90 bp TCCACCCGCCTCATTGGGCATGGCCCCGGCAAGTGTCTCTGCCCGGCCCTGGGCGTGTCTTCCAGGTACTaGACCCTCACGGTCACCACT +
Preference number: 4 (lower is better)
Translates to: STRLIGHGPGKCLCPALGVSSRY*TLTVTT
Trigger: AGTGGTGACCGTGAGGGTGCAGTACCTGGAAGACAC...GCCCAGGGCCGGGCAGAGACACTTGCCGGGGCCATGCCCAATGAGGCGGGTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR GCA 90 bp CCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTCTGTTGCACCGCGGGTATCTaGGCGCCCAAGGGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: PGHRVLGPEFCSGPSSLCCTAGI*APKGSA
Trigger: GGCGCTGCCCTTGGGCGCGCAGATACCCGCGGTGCA...ACAGAGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp AGCGGCTTGCAGAGACTCCATGGCCCCCAGCCAGCTTCAGCTCACGCCAGAAAAGCTCCCAGCAGGCGGTaGACCGCGGGTATCTGCGCG +
Preference number: 4 (lower is better)
Translates to: SGLQRLHGPQPASAHARKAPSRR*TAGICA
Trigger: CGCGCAGATACCCGCGGTGCACCGCCTGCTGGGAGC...TTTTCTGGCGTGAGCTGAAGCTGGCTGGGGGCCATGGAGTCTCTGCAAGCCGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR GCA 90 bp AGGGGCTGTCTCTGGGGAGTCCCAGAGTTGCCGGGCATCTGGGTGTCCACCCGCAGCGCTTCCATGCCCTaGTGCTCCAGTGCATCCGTC +
Preference number: 4 (lower is better)
Translates to: RGCLWGVPELPGIWVSTRSASMP*CSSASV
Trigger: GACGGATGCACTGGAGCAGCAGGGCATGGAAGCGCT...GCGGGTGGACACCCAGATGCCCGGCAACTCTGGGACTCCCCAGAGACAGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR GCA 90 bp AGAGGGTGGCGCAGGGCCCAAAGCGGCTTGCAGAGACTCCATGGCCCCCAGCCAGGACCAGCGCTTCCATaGCCTGCTGCTCCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: RGWRRAQSGLQRLHGPQPGPALP*PAAPVH
Trigger: ATGCACTGGAGCAGCAGGGCATGGAAGCGCTGGTCC...TGGCTGGGGGCCATGGAGTCTCTGCAAGCCGCTTTGGGCCCTGCGCCACCCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR GCA 90 bp AGGCATGGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCGTCAGTGCCCGCAGTaGCCAGGTGGCGCTGGACCA +
Preference number: 4 (lower is better)
Translates to: RHGSWAQSSGARILLWALRQCPQ*PGGAGP
Trigger: TGGTCCAGCGCCACCTGGGCACTGCGGGCACTGACG...GAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCCATGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp TGGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACGCAGGTCGACGTCAGTaGCCGCAGTGCCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: WLLGTEFWGQNSALGPPHAGRRQ*PQCPGG
Trigger: GCCACCTGGGCACTGCGGGCACTGACGTCGACCTGC...GTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp GGCTTGCTGGTATCAGTGGCTCCTTGGGCTCTGGTGCAAGGCTTCGCTGGGCCCCTCCTTGGGCTCTGGTaGAAGGCTTCGCTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: GLLVSVAPWALVQGFAGPLLGLW*KASLGP
Trigger: CGGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAG...GGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACCAGCAAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR GCA 90 bp CACCCGCCTCATTGGGCATGGCCCCGGCAAGTGTCTCTGCCCGGCCCTGGGCCACTCAGCCTTGGGGCTTaGTGGTATCAGTGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: HPPHWAWPRQVSLPGPGPLSLGA*WYQWLL
Trigger: AAGGAGCCACTGATACCAGCAAGCCCCAAGGCTGAG...TGGCCCAGGGCCGGGCAGAGACACTTGCCGGGGCCATGCCCAATGAGGCGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR GCA 90 bp CATTGGGCATGGCCCCGGCAAGTGTCTCTGCCCGGCCCTGGGCCAGCGCAACCTAATAGAGAGCCTGGGTaGACGGGTAGGGAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: HWAWPRQVSLPGPGPAQPNREPG*TGRELP
Trigger: TGGGAGCTCCCTACCCGTGCACCCAGGCTCTCTATT...AGGTTGCGCTGGCCCAGGGCCGGGCAGAGACACTTGCCGGGGCCATGCCCAATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR GCA 90 bp GTAGACGAGCAGCGAGGCCGCCAATGGAGGCAAGAGTCATCAGGAAGTTCTCGGCAGGCTCTCCTCGGCTaGCCGGCTCCGGCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: VDEQRGRQWRQESSGSSRQALLG*PAPALQ
Trigger: CTGGAGCGCCGGAGCCGGGCAGCCGAGGAGAGCCTG...CCGAGAACTTCCTGATGACTCTTGCCTCCATTGGCGGCCTCGCTGCTCGTCTAC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567561.1
CDS-3UTR CCA 90 bp CCTCATTGGGCATGGCCCCGGCAAGTGTCTCTGCCCGGCCCTGGGCCAGCGCAAAGATGCTCCTCTCGCTaGAGGTGTCAGCTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: PHWAWPRQVSLPGPGPAQRCSSR*RCQLRV
Trigger: CACCCTCAGCTGACACCTCCAGCGAGAGGAGCATCT...TTGCGCTGGCCCAGGGCCGGGCAGAGACACTTGCCGGGGCCATGCCCAATGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR CCA 90 bp TTGCCGGGCATCTGGGTGTCCACCCGCCTCATTGGGCATGGCCCCGGCAAGTGTCCGCCTCATTGGGCATaGCCCCGGCAAGTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: LPGIWVSTRLIGHGPGKCPPHWA*PRQVSL
Trigger: CAGAGACACTTGCCGGGGCCATGCCCAATGAGGCGG...ACACTTGCCGGGGCCATGCCCAATGAGGCGGGTGGACACCCAGATGCCCGGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR CCA 90 bp GTATCAGTGGCTCCTTGGGCTCTGGTGCAAGGCTTCGCTGGGCCCGGAGCAGGAGGGGCCTTTGATGGGTaGGGGAGGTGGAAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: VSVAPWALVQGFAGPGAGGAFDG*GRWKWG
Trigger: CCCCCACTTCCACCTCCCCCACCCATCAAAGGCCCC...TCCTGCTCCGGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR GCA 90 bp CCTCATTGGGCATGGCCCCGGCAAGTGTCTCTGCCCGGCCCTGGGCCAGCGCAAGCCCTGCTGCTCCAGTaGATCCGTCACATCGTAGAA +
Preference number: 4 (lower is better)
Translates to: PHWAWPRQVSLPGPGPAQALLLQ*IRHIVE
Trigger: TTCTACGATGTGACGGATGCACTGGAGCAGCAGGGC...TTGCGCTGGCCCAGGGCCGGGCAGAGACACTTGCCGGGGCCATGCCCAATGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR GCA 90 bp CCAGCGCAACCTGCTTCTCTGTTTCTGCTGCCGCCACATTCTCCAGGAACCGGGCGTCAGTGCCCGCAGTaGCCAGGTGGCGCTGGACCA +
Preference number: 4 (lower is better)
Translates to: PAQPASLFLLPPHSPGTGRQCPQ*PGGAGP
Trigger: TGGTCCAGCGCCACCTGGGCACTGCGGGCACTGACG...CCCGGTTCCTGGAGAATGTGGCGGCAGCAGAAACAGAGAAGCAGGTTGCGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR GCA 90 bp AGATGGGCTCAGCCTTGGGGCTTGCTGGTATCAGTGGCTCCTTGGGCTCTGGTGGCAGGTCGACGTCAGTaGCCGCAGTGCCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: RWAQPWGLLVSVAPWALVAGRRQ*PQCPGG
Trigger: GCCACCTGGGCACTGCGGGCACTGACGTCGACCTGC...CACCAGAGCCCAAGGAGCCACTGATACCAGCAAGCCCCAAGGCTGAGCCCATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR GCA 90 bp AGAGGGTGGCGCAGGGCCCAAAGCGGCTTGCAGAGACTCCATGGCCCCCAGCCATGGGCCAGCGCAACCTaGTTCTCTGTTTCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: RGWRRAQSGLQRLHGPQPWASAT*FSVSAA
Trigger: GGCAGCAGAAACAGAGAAGCAGGTTGCGCTGGCCCA...TGGCTGGGGGCCATGGAGTCTCTGCAAGCCGCTTTGGGCCCTGCGCCACCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR CCA 90 bp TGCAGGGGCTGTCTCTGGGGAGTCCCAGAGTTGCCGGGCATCTGGGTGTCCACCGAGCACCGGTGGTGCTaGCCACAGAGTTCACTGCAC +
Preference number: 4 (lower is better)
Translates to: CRGCLWGVPELPGIWVSTEHRWC*PQSSLH
Trigger: GTGCAGTGAACTCTGTGGCCAGCACCACCGGTGCTC...GGTGGACACCCAGATGCCCGGCAACTCTGGGACTCCCCAGAGACAGCCCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR CCA 90 bp TGCAGGGGCTGTCTCTGGGGAGTCCCAGAGTTGCCGGGCATCTGGGTGTCCACCAGGGAGGAGCACCGGTaGTGCTGGCCACAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: CRGCLWGVPELPGIWVSTREEHR*CWPQSS
Trigger: TGAACTCTGTGGCCAGCACCACCGGTGCTCCTCCCT...GGTGGACACCCAGATGCCCGGCAACTCTGGGACTCCCCAGAGACAGCCCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR CCA 90 bp ATGGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCAGTGCCCAGGTGGCGCTaGACCAGCGCTTCCATGCCC +
Preference number: 4 (lower is better)
Translates to: MAPGHRVLGPEFCSGPSSVPRWR*TSASMP
Trigger: GGGCATGGAAGCGCTGGTCCAGCGCCACCTGGGCAC...TGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp CCAGAGAACGGCGGCTCCTCTTGCCCTCCTCAGAAGAAGGCTTTCGTCGTTCCCGTGCCCAGGTGGCGCTaGACCAGCGCTTCCATGCCC +
Preference number: 4 (lower is better)
Translates to: PENGGSSCPPQKKAFVVPVPRWR*TSASMP
Trigger: GGGCATGGAAGCGCTGGTCCAGCGCCACCTGGGCAC...GGGAACGACGAAAGCCTTCTTCTGAGGAGGGCAAGAGGAGCCGCCGTTCTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR CCA 90 bp GGTATCAGTGGCTCCTTGGGCTCTGGTGCAAGGCTTCGCTGGGCCCGGAGCAGGAGGTTCACTGAAGCTTaGAGACCGGAGGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: GISGSLGSGARLRWARSRRFTEA*RPEGGP
Trigger: GGGCCCTCCCTCCGGTCTCCAAGCTTCAGTGAACCT...CCTGCTCCGGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR CCA 90 bp TCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTCTGGTCTCTGCCCGGCCCTaGGCCAGCGCAACCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SWAQSSGARILLWALLTLVSARP*ASATCF
Trigger: GAAGCAGGTTGCGCTGGCCCAGGGCCGGGCAGAGAC...CAGAGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp TGGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACGTCCACCCGCCTCATTaGGCATGGCCCCGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: WLLGTEFWGQNSALGPPHVHPPH*AWPRQV
Trigger: CACTTGCCGGGGCCATGCCCAATGAGGCGGGTGGAC...GTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp CCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTCTGTGTGAAGCCCAGAGGGTaGCGCAGGGCCCAAAGCGGC +
Preference number: 4 (lower is better)
Translates to: PGHRVLGPEFCSGPSSLCVKPRG*RRAQSG
Trigger: GCCGCTTTGGGCCCTGCGCCACCCTCTGGGCTTCAC...ACAGAGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp CCAGAGAACGGCGGCTCCTCTTGCCCTCCTCAGAAGAAGGCTTTCGTCGTTCCCGTGAAGCCCAGAGGGTaGCGCAGGGCCCAAAGCGGC +
Preference number: 4 (lower is better)
Translates to: PENGGSSCPPQKKAFVVPVKPRG*RRAQSG
Trigger: GCCGCTTTGGGCCCTGCGCCACCCTCTGGGCTTCAC...GGGAACGACGAAAGCCTTCTTCTGAGGAGGGCAAGAGGAGCCGCCGTTCTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR CCA 90 bp TGCACTATCCTTAGCATGGCAACACGGCGGGCACACTGGTCCAGGAAGTGGGTGGCGGGCACGCAGGGCTaGGGCCAGCTCATGCTTGGC +
Preference number: 4 (lower is better)
Translates to: CTILSMATRRAHWSRKWVAGTQG*GQLMLG
Trigger: GCCAAGCATGAGCTGGCCCCAGCCCTGCGTGCCCGC...CACCCACTTCCTGGACCAGTGTGCCCGCCGTGTTGCCATGCTAAGGATAGTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567561.1
CDS-3UTR CCA 90 bp TGGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACGCCTGGGGGTTCTTCTaGGGATGCAGTGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: WLLGTEFWGQNSALGPPHAWGFF*GCSGGP
Trigger: GGGCCCTCCACTGCATCCCCAGAAGAACCCCCAGGC...GTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp CCTCATTGGGCATGGCCCCGGCAAGTGTCTCTGCCCGGCCCTGGGCCAGCGCAAGCAGCTCAGCCCCTCTaGAAGATCTGCTTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: PHWAWPRQVSLPGPGPAQAAQPL*KICFSE
Trigger: CTCACTGAAGCAGATCTTCCAGAGGGGCTGAGCTGC...TTGCGCTGGCCCAGGGCCGGGCAGAGACACTTGCCGGGGCCATGCCCAATGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561922.1
3UTR CAA 72 bp GGTGCACGGGTAGGGAGCTCCCAGATGGGCTCAGCCTaGGGGCTTGCTGGTATCAGTGGCTCCTTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: GARVGSSQMGSA*GLAGISGSLGS
Trigger: AGAGCCCAAGGAGCCACTGATACCAGCAAGCCCCAAGGCTGAGCCCATCTGGGAGCTCCCTACCCGTGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR TCA 90 bp AGAGAACGGCGGCTCCTCTTGCCCTCCTCAGAAGAAGGCTTTCGTCGTTCCCGCCCTCACGGTCACCACTaGTACCGGCTCTCCGTCCCC +
Preference number: 4 (lower is better)
Translates to: RERRLLLPSSEEGFRRSRPHGHH*YRLSVP
Trigger: GGGGACGGAGAGCCGGTATCAGTGGTGACCGTGAGG...GCGGGAACGACGAAAGCCTTCTTCTGAGGAGGGCAAGAGGAGCCGCCGTTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR TCA 90 bp GGTGTCCACCCGCCTCATTGGGCATGGCCCCGGCAAGTGTCTCTGCCCGGCCCTGCTTCCGCCCTTTGCTaGTCTCTTCATAGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: GVHPPHWAWPRQVSLPGPASALC*SLHRSP
Trigger: AGGGCTTCTATGAAGAGATCAGCAAAGGGCGGAAGC...AGGGCCGGGCAGAGACACTTGCCGGGGCCATGCCCAATGAGGCGGGTGGACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR TCA 90 bp TGCCCGGCTCCGGCGCTCCAGCTGCCCCAGGTTCTCAGTCAGCTGTTCAAAGTCCCCTCAATGCAGGCCTaGGGCCTGAGGCATTGGTCT +
Preference number: 4 (lower is better)
Translates to: CPAPALQLPQVLSQLFKVPSMQA*GLRHWS
Trigger: AGACCAATGCCTCAGGCCTCAGGCCTGCATTGAGGG...GACTTTGAACAGCTGACTGAGAACCTGGGGCAGCTGGAGCGCCGGAGCCGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567561.1
CDS-3UTR GCA 90 bp CTGGTATCAGTGGCTCCTTGGGCTCTGGTGCAAGGCTTCGCTGGGCCCGGAGCATCCAGCATCTCCCGCTaGTCTTCCAGGGACAGCTCG +
Preference number: 4 (lower is better)
Translates to: LVSVAPWALVQGFAGPGASSISR*SSRDSS
Trigger: CGAGCTGTCCCTGGAAGAGCAGCGGGAGATGCTGGA...TGCTCCGGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR GCA 90 bp GCTGGTATCAGTGGCTCCTTGGGCTCTGGTGCAAGGCTTCGCTGGGCCCGGAGCTGGGCCAGCGCAACCTaGTTCTCTGTTTCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: AGISGSLGSGARLRWARSWASAT*FSVSAA
Trigger: GGCAGCAGAAACAGAGAAGCAGGTTGCGCTGGCCCA...GCTCCGGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR GCA 90 bp AGGTCCCCAATAGAGAGCCTGGGTGCACGGGTAGGGAGCTCCCAGATGGGCTCAGGGGAGTCCCAGAGTTaGCGGGCATCTGGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: RSPIESLGARVGSSQMGSGESQS*RASGCP
Trigger: TGGACACCCAGATGCCCGGCAACTCTGGGACTCCCC...TGAGCCCATCTGGGAGCTCCCTACCCGTGCACCCAGGCTCTCTATTGGGGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR GCA 90 bp ATGGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCAGGGCCCAAAGCGGCTTaGAGAGACTCCATGGCCCCC +
Preference number: 4 (lower is better)
Translates to: MAPGHRVLGPEFCSGPSSGPKAA*RDSMAP
Trigger: GGGGGCCATGGAGTCTCTGCAAGCCGCTTTGGGCCC...TGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp ATGGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACCGCCCACCAGCGCCTaGGGCTTCTTCGATGTCTCC +
Preference number: 4 (lower is better)
Translates to: MAPGHRVLGPEFCSGPSSPPTSA*GFFDVS
Trigger: GGAGACATCGAAGAAGCCCCAGGCGCTGGTGGGCGG...TGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp ATGGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCAGGGGCCTTTGATGGGTaGGGGAGGTGGAAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: MAPGHRVLGPEFCSGPSSGAFDG*GRWKWG
Trigger: CCCCCACTTCCACCTCCCCCACCCATCAAAGGCCCC...TGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp TCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTCTGCACTGGTCCAGGAAGTaGGTGAGGCGGGCACGCAGG +
Preference number: 4 (lower is better)
Translates to: SWAQSSGARILLWALLTLHWSRK*VRRARR
Trigger: CCTGCGTGCCCGCCTCACCCACTTCCTGGACCAGTG...CAGAGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR TCA 90 bp TGCCGGGCATCTGGGTGTCCACCCGCCTCATTGGGCATGGCCCCGGCAAGTGTCAGGAAAAAGGTTCACTaGAGCTTGGAGACCGGAGGG +
Preference number: 4 (lower is better)
Translates to: CRASGCPPASLGMAPASVRKKVH*SLETGG
Trigger: CCCTCCGGTCTCCAAGCTTCAGTGAACCTTTTTCCT...GACACTTGCCGGGGCCATGCCCAATGAGGCGGGTGGACACCCAGATGCCCGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR TCA 90 bp GGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTGCTGGAGGTGTCAGCTaGGGGTGCCACAGAGATGGT +
Preference number: 4 (lower is better)
Translates to: GSWAQSSGARILLWALLTAGGVS*GCHRDG
Trigger: ACCATCTCTGTGGCACCCTCAGCTGACACCTCCAGC...AGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR TCA 90 bp CCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTCTGTGCCCCACTGTGGGCATaGTTGGGGAGCTGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: PGHRVLGPEFCSGPSSLCAPLWA*LGSCSG
Trigger: TCCAGAGCAGCTCCCCAATCATGCCCACAGTGGGGC...ACAGAGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp TGGTATCAGTGGCTCCTTGGGCTCTGGTGCAAGGCTTCGCTGGGCCCGGAGCAGGAGTCCCGGCCCCAGTaGAGCTTCTACTCAAAGCAC +
Preference number: 4 (lower is better)
Translates to: WYQWLLGLWCKASLGPEQESRPQ*SFYSKH
Trigger: GTGCTTTGAGTAGAAGCTGCACTGGGGCCGGGACTC...CTGCTCCGGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR GCA 90 bp AAGTCCAGGTCCCCAATAGAGAGCCTGGGTGCACGGGTAGGGAGCTCCCAGATGGGGGAGTCCCAGAGTTaGCGGGCATCTGGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: KSRSPIESLGARVGSSQMGESQS*RASGCP
Trigger: TGGACACCCAGATGCCCGGCAACTCTGGGACTCCCC...CATCTGGGAGCTCCCTACCCGTGCACCCAGGCTCTCTATTGGGGACCTGGACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR GCA 90 bp CACTCTGTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACCAGGCTCTCCTCGGCTaGCCGGCTCCGGCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: HSVISCTAVQGPDRFPGYQALLG*PAPALQ
Trigger: CTGGAGCGCCGGAGCCGGGCAGCCGAGGAGAGCCTG...GTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGACAGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp TGCCGGGCATCTGGGTGTCCACCCGCCTCATTGGGCATGGCCCCGGCAAGTGTCCCCCTCTGGAAGATCTaGTTCAGTGAGAAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: CRASGCPPASLGMAPASVPLWKI*FSEKRE
Trigger: CTCCCTCTTCTCACTGAAGCAGATCTTCCAGAGGGG...GACACTTGCCGGGGCCATGCCCAATGAGGCGGGTGGACACCCAGATGCCCGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR CCA 90 bp TCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTCTGGCGGCTCCGGAAAGTTaGCACATGCGAAGGGGTCGG +
Preference number: 4 (lower is better)
Translates to: SWAQSSGARILLWALLTLAAPES*HMRRGR
Trigger: CCGACCCCTTCGCATGTGCCAACTTTCCGGAGCCGC...CAGAGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp CCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTCTGTGGCTCTGGGGTGTTCTaGCTGCAGGGGCTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: PGHRVLGPEFCSGPSSLCGSGVF*LQGLSL
Trigger: CAGAGACAGCCCCTGCAGCCAGAACACCCCAGAGCC...ACAGAGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp CCAGCGCAACCTGCTTCTCTGTTTCTGCTGCCGCCACATTCTCCAGGAACCGGGTGGCTCCTTGGGCTCTaGTGCAAGGCTTCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PAQPASLFLLPPHSPGTGWLLGL*CKASLG
Trigger: GCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCA...CCCGGTTCCTGGAGAATGTGGCGGCAGCAGAAACAGAGAAGCAGGTTGCGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR CCA 90 bp GGCTTGCTGGTATCAGTGGCTCCTTGGGCTCTGGTGCAAGGCTTCGCTGGGCCCGCTTGCTGGTATCAGTaGCTCCTTGGGCTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: GLLVSVAPWALVQGFAGPACWYQ*LLGLWC
Trigger: GCACCAGAGCCCAAGGAGCCACTGATACCAGCAAGC...GGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACCAGCAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR CCA 90 bp GTATCAGTGGCTCCTTGGGCTCTGGTGCAAGGCTTCGCTGGGCCCGGAGCAGGAGCTTGCTGGTATCAGTaGCTCCTTGGGCTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: VSVAPWALVQGFAGPGAGACWYQ*LLGLWC
Trigger: GCACCAGAGCCCAAGGAGCCACTGATACCAGCAAGC...TCCTGCTCCGGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR CCA 90 bp GCTGGTATCAGTGGCTCCTTGGGCTCTGGTGCAAGGCTTCGCTGGGCCCGGAGCAGATGGGCTCAGCCTTaGGGCTTGCTGGTATCAGTG +
Preference number: 4 (lower is better)
Translates to: AGISGSLGSGARLRWARSRWAQP*GLLVSV
Trigger: CACTGATACCAGCAAGCCCCAAGGCTGAGCCCATCT...GCTCCGGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR CCA 90 bp AGCTTGGAGACCGGAGGGAGGGCCCACAGGGCTGGAGGCGGGGCCTGTCAGCAGACATTCAGCATGTCCTaGTCTTCATCCTCCCCTAGA +
Preference number: 4 (lower is better)
Translates to: SLETGGRAHRAGGGACQQTFSMS*SSSSPR
Trigger: TCTAGGGGAGGATGAAGACCAGGACATGCTGAATGT...CTGCTGACAGGCCCCGCCTCCAGCCCTGTGGGCCCTCCCTCCGGTCTCCAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR CCA 90 bp CCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTCTGTGGGCCAGCTCATGCTTaGCCAAGCTCCGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: PGHRVLGPEFCSGPSSLCGPAHA*PSSAGS
Trigger: AGAGCCTGCGGAGCTTGGCCAAGCATGAGCTGGCCC...ACAGAGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp TTGAAGGCCCAGAGTTGTAGACGAGCAGCGAGGCCGCCAATGGAGGCAAGAGTCCACTGGTCCAGGAAGTaGGTGAGGCGGGCACGCAGG +
Preference number: 4 (lower is better)
Translates to: LKAQSCRRAARPPMEARVHWSRK*VRRARR
Trigger: CCTGCGTGCCCGCCTCACCCACTTCCTGGACCAGTG...GACTCTTGCCTCCATTGGCGGCCTCGCTGCTCGTCTACAACTCTGGGCCTTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567561.1
CDS-3UTR CCA 90 bp TGGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTGCGGCGATTGTGTGTaGTGTCCTCAGGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: WLLGTEFWGQNSALGPPHCGDCV*CPQACW
Trigger: CCAGCAGGCCTGAGGACACCACACACAATCGCCGCA...GTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp CCTCATTGGGCATGGCCCCGGCAAGTGTCTCTGCCCGGCCCTGGGCCAGCGCAAGGAGCTCAGGACCACTaGAGCTATACAGCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: PHWAWPRQVSLPGPGPAQGAQDH*SYTAFL
Trigger: CAGAAAAGCTGTATAGCTCCAGTGGTCCTGAGCTCC...TTGCGCTGGCCCAGGGCCGGGCAGAGACACTTGCCGGGGCCATGCCCAATGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR CCA 90 bp TCCCGCAGCGTGTGGCAGAACTGCATGATGCGCACTTCACGGGCCGCCTGCGGGCCTCCGTGGGCATCATaGTCAGTAGCTTCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: SRSVWQNCMMRTSRAACGPPWAS*SVASED
Trigger: ATCCTCAGAAGCTACTGACCATGATGCCCACGGAGG...CCCGCAGGCGGCCCGTGAAGTGCGCATCATGCAGTTCTGCCACACGCTGCGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567561.1
CDS-3UTR TCA 90 bp AGAGGGTGGCGCAGGGCCCAAAGCGGCTTGCAGAGACTCCATGGCCCCCAGCCAAATGTGTACAGCCACTaGATAGTGTCACTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: RGWRRAQSGLQRLHGPQPNVYSH*IVSLWA
Trigger: GGCCCACAGTGACACTATTCAGTGGCTGTACACATT...TGGCTGGGGGCCATGGAGTCTCTGCAAGCCGCTTTGGGCCCTGCGCCACCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR TCA 90 bp TCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTCTGTGTGGCAGAACTGCATaGTGCGCACTTCACGGGCCG +
Preference number: 4 (lower is better)
Translates to: SWAQSSGARILLWALLTLCGRTA*CALHGP
Trigger: CGGCCCGTGAAGTGCGCATCATGCAGTTCTGCCACA...CAGAGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR TCA 90 bp GGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTACTTCTCTGTCTCGGTaGTCATGCGTCCCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: GSWAQSSGARILLWALLTTSLSR*SCVPGS
Trigger: AGACCCGGGGACGCATGATCACCGAGACAGAGAAGT...AGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp CCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTCTGTGAGGAGCACCGGTGGTaGTGGCCACAGAGTTCACTG +
Preference number: 4 (lower is better)
Translates to: PGHRVLGPEFCSGPSSLCEEHRW*WPQSSL
Trigger: CAGTGAACTCTGTGGCCAGCACCACCGGTGCTCCTC...ACAGAGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp TCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTCTGAGCGCTTCCATGCCCTaGTGCTCCAGTGCATCCGTC +
Preference number: 4 (lower is better)
Translates to: SWAQSSGARILLWALLTLSASMP*CSSASV
Trigger: GACGGATGCACTGGAGCAGCAGGGCATGGAAGCGCT...CAGAGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp AGGCATGGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCAACGGCGGCTCCTCTTaGCCTCCTCAGAAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: RHGSWAQSSGARILLWALNGGSS*PPQKKA
Trigger: AGCCTTCTTCTGAGGAGGGCAAGAGGAGCCGCCGTT...GAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCCATGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp AGGTCCCCAATAGAGAGCCTGGGTGCACGGGTAGGGAGCTCCCAGATGGGCTCAAACGGCGGCTCCTCTTaGCCTCCTCAGAAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: RSPIESLGARVGSSQMGSNGGSS*PPQKKA
Trigger: AGCCTTCTTCTGAGGAGGGCAAGAGGAGCCGCCGTT...TGAGCCCATCTGGGAGCTCCCTACCCGTGCACCCAGGCTCTCTATTGGGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR GCA 90 bp GCTGGTATCAGTGGCTCCTTGGGCTCTGGTGCAAGGCTTCGCTGGGCCCGGAGCCTGCTTCTCTGTTTCTaGTGCCGCCACATTCTCCAG +
Preference number: 4 (lower is better)
Translates to: AGISGSLGSGARLRWARSLLLCF*CRHILQ
Trigger: CTGGAGAATGTGGCGGCAGCAGAAACAGAGAAGCAG...GCTCCGGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR GCA 90 bp GGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTTGGGCCAGCGCAACCTaGTTCTCTGTTTCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: GSWAQSSGARILLWALLTWASAT*FSVSAA
Trigger: GGCAGCAGAAACAGAGAAGCAGGTTGCGCTGGCCCA...AGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp CAATGGAGGCAAGAGTCATCAGGAAGTTCTCGGCTGGGCCCAGGGGTATGTCAGGCTGGGGCCAGCTCATaGTTGGCCAAGCTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: QWRQESSGSSRLGPGVCQAGASS*LAKLRR
Trigger: CCTGCGGAGCTTGGCCAAGCATGAGCTGGCCCCAGC...CTGACATACCCCTGGGCCCAGCCGAGAACTTCCTGATGACTCTTGCCTCCATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567561.1
CDS-3UTR GCA 90 bp TCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTCTGGCCTGCTTCTGCTGCTaGTGTAGCACTCGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: SWAQSSGARILLWALLTLACFCC*CSTRSR
Trigger: CCGGGAACGAGTGCTACAGCAGCAGCAGAAGCAGGC...CAGAGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp GGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTGTGGCCTGCTTCTGCTaGTGCTGTAGCACTCGTTCC +
Preference number: 4 (lower is better)
Translates to: GSWAQSSGARILLWALLTVACFC*CCSTRS
Trigger: GGAACGAGTGCTACAGCAGCAGCAGAAGCAGGCCAC...AGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp TCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTCTGTGGCCCGCTGCTCACTaGTACTGGGACAGAGGGGTT +
Preference number: 4 (lower is better)
Translates to: SWAQSSGARILLWALLTLWPAAH*YWDRGV
Trigger: AACCCCTCTGTCCCAGTAGCAGTGAGCAGCGGGCCA...CAGAGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp TCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTCTGCTGGGGCCAGAATTCTaGTCTGGGCCCTCCTCACTC +
Preference number: 4 (lower is better)
Translates to: SWAQSSGARILLWALLTLLGPEF*SGPSSL
Trigger: GAGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAG...CAGAGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp GGGCTTTGTAGATGCTCCTCTCGCTGGAGGTGTCAGCTGAGGGTGCCACAGAGAGCGGCTCCGGAAAGTTaGCACATGCGAAGGGGTCGG +
Preference number: 4 (lower is better)
Translates to: GLCRCSSRWRCQLRVPQRAAPES*HMRRGR
Trigger: CCGACCCCTTCGCATGTGCCAACTTTCCGGAGCCGC...TCTCTGTGGCACCCTCAGCTGACACCTCCAGCGAGAGGAGCATCTACAAAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR CCA 90 bp TCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTCTGGAGCACCGGTGGTGCTaGCCACAGAGTTCACTGCAC +
Preference number: 4 (lower is better)
Translates to: SWAQSSGARILLWALLTLEHRWC*PQSSLH
Trigger: GTGCAGTGAACTCTGTGGCCAGCACCACCGGTGCTC...CAGAGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp CCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTCTGTAGGGAGGAGCACCGGTaGTGCTGGCCACAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: PGHRVLGPEFCSGPSSLCREEHR*CWPQSS
Trigger: TGAACTCTGTGGCCAGCACCACCGGTGCTCCTCCCT...ACAGAGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp AGGGAGCTGGGATGTCTTTCCCAGCCTCCACAGACTCTACATTCAGCATGTCCTCCCGCAGTGCCCAGGTaGCGCTGGACCAGCGCTTCC +
Preference number: 4 (lower is better)
Translates to: RELGCLSQPPQTLHSACPPAVPR*RWTSAS
Trigger: GGAAGCGCTGGTCCAGCGCCACCTGGGCACTGCGGG...AGGACATGCTGAATGTAGAGTCTGTGGAGGCTGGGAAAGACATCCCAGCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR CCA 90 bp CACTCTGTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACGGCCGGTGGAAGAGGTaGGGCCTACCGGTGAGGCGG +
Preference number: 4 (lower is better)
Translates to: HSVISCTAVQGPDRFPGYGRWKR*GLPVRR
Trigger: CCGCCTCACCGGTAGGCCCCACCTCTTCCACCGGCC...GTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGACAGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp AGCTGGGATGTCTTTCCCAGCCTCCACAGACTCTACATTCAGCATGTCCTGGTCGGCCGGTGGAAGAGGTaGGGCCTACCGGTGAGGCGG +
Preference number: 4 (lower is better)
Translates to: SWDVFPSLHRLYIQHVLVGRWKR*GLPVRR
Trigger: CCGCCTCACCGGTAGGCCCCACCTCTTCCACCGGCC...GACCAGGACATGCTGAATGTAGAGTCTGTGGAGGCTGGGAAAGACATCCCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR CCA 90 bp TCCAGAGAACGGCGGCTCCTCTTGCCCTCCTCAGAAGAAGGCTTTCGTCGTTCCCCGCCTCATTGGGCATaGCCCCGGCAAGTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: SRERRLLLPSSEEGFRRSPPHWA*PRQVSL
Trigger: CAGAGACACTTGCCGGGGCCATGCCCAATGAGGCGG...GGAACGACGAAAGCCTTCTTCTGAGGAGGGCAAGAGGAGCCGCCGTTCTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR CCA 90 bp TCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTCTGGAGTTGCCGGGCATCTaGGTGTCCACCCGCCTCATT +
Preference number: 4 (lower is better)
Translates to: SWAQSSGARILLWALLTLELPGI*VSTRLI
Trigger: AATGAGGCGGGTGGACACCCAGATGCCCGGCAACTC...CAGAGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp CTGGGCCAGCGCAACCTGCTTCTCTGTTTCTGCTGCCGCCACATTCTCCAGGAAGGCTCTGGGGTGTTCTaGCTGCAGGGGCTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: LGQRNLLLCFCCRHILQEGSGVF*LQGLSL
Trigger: CAGAGACAGCCCCTGCAGCCAGAACACCCCAGAGCC...TTCCTGGAGAATGTGGCGGCAGCAGAAACAGAGAAGCAGGTTGCGCTGGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR CCA 90 bp GTATCAGTGGCTCCTTGGGCTCTGGTGCAAGGCTTCGCTGGGCCCGGAGCAGGAGTATCAGTGGCTCCTTaGGCTCTGGTGCAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: VSVAPWALVQGFAGPGAGVSVAP*ALVQGF
Trigger: GAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATAC...TCCTGCTCCGGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR CCA 90 bp ATGGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTTGCAGAGACTCCATaGCCCCCAGCCAGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: MAPGHRVLGPEFCSGPSSLAETP*PPASFS
Trigger: GCTGAAGCTGGCTGGGGGCCATGGAGTCTCTGCAAG...TGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp CCAGAGAACGGCGGCTCCTCTTGCCCTCCTCAGAAGAAGGCTTTCGTCGTTCCCCTTGCAGAGACTCCATaGCCCCCAGCCAGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: PENGGSSCPPQKKAFVVPLAETP*PPASFS
Trigger: GCTGAAGCTGGCTGGGGGCCATGGAGTCTCTGCAAG...GGGAACGACGAAAGCCTTCTTCTGAGGAGGGCAAGAGGAGCCGCCGTTCTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR CCA 90 bp TCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTCTGTGGCGTTGCTGCGCTTaGGGTCCAGCACTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: SWAQSSGARILLWALLTLWRCCA*GPALWS
Trigger: TGACCACAGTGCTGGACCCCAAGCGCAGCAACGCCA...CAGAGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp GGCCGCCAATGGAGGCAAGAGTCATCAGGAAGTTCTCGGCTGGGCCCAGGGGTAGCCGCTCTTCCTCCGTaGGCATCATGGTCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: GRQWRQESSGSSRLGPGVAALPP*ASWSVA
Trigger: AGCTACTGACCATGATGCCCACGGAGGAAGAGCGGC...TACCCCTGGGCCCAGCCGAGAACTTCCTGATGACTCTTGCCTCCATTGGCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567509.1
ENST00000567561.1
CDS-3UTR CCA 90 bp AGGCATGGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCGGGGTATGTCAGGGTTaGCCAGCTGGGCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: RHGSWAQSSGARILLWALGVCQG*PAGLPQ
Trigger: TTGAGGAAGCCCAGCTGGCCAACCCTGACATACCCC...GAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCCATGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp TGCCCGGCTCCGGCGCTCCAGCTGCCCCAGGTTCTCAGTCAGCTGTTCAAAGTCAATTCCCGCAGCGTGTaGCAGAACTGCATGATGCGC +
Preference number: 4 (lower is better)
Translates to: CPAPALQLPQVLSQLFKVNSRSV*QNCMMR
Trigger: GCGCATCATGCAGTTCTGCCACACGCTGCGGGAATT...GACTTTGAACAGCTGACTGAGAACCTGGGGCAGCTGGAGCGCCGGAGCCGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567561.1
CDS-3UTR TCA 90 bp GGGTGTAGCCCAGGTAGAGCAGGAAGGCATGGAACCTATTGCAGACACGGCGGTCCACCTGGGAGCCATTaGGGAAGTTGCCCACCGCTA +
Preference number: 4 (lower is better)
Translates to: GCSPGRAGRHGTYCRHGGPPGSH*GSCPPL
Trigger: TAGCGGTGGGCAACTTCCTCAATGGCTCCCAGGTGG...ACCGCCGTGTCTGCAATAGGTTCCATGCCTTCCTGCTCTACCTGGGCTACACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567561.1
CDS-3UTR GCA 90 bp TGGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACGTGTCTTCCAGGTACTaGACCCTCACGGTCACCACT +
Preference number: 4 (lower is better)
Translates to: WLLGTEFWGQNSALGPPHVSSRY*TLTVTT
Trigger: AGTGGTGACCGTGAGGGTGCAGTACCTGGAAGACAC...GTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp AGAGGGTGGCGCAGGGCCCAAAGCGGCTTGCAGAGACTCCATGGCCCCCAGCCAACGGATGAACAGCGGTaGGTTGTTTTCGGAGTATTC +
Preference number: 4 (lower is better)
Translates to: RGWRRAQSGLQRLHGPQPTDEQR*VVFGVF
Trigger: GAATACTCCGAAAACAACGCACCGCTGTTCATCCGT...TGGCTGGGGGCCATGGAGTCTCTGCAAGCCGCTTTGGGCCCTGCGCCACCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR GCA 90 bp TTGGGGCTTGCTGGTATCAGTGGCTCCTTGGGCTCTGGTGCAAGGCTTCGCTGGGCTTCCATGCCCTGCTaGTCCAGTGCATCCGTCACA +
Preference number: 4 (lower is better)
Translates to: LGLAGISGSLGSGARLRWASMPC*SSASVT
Trigger: TGTGACGGATGCACTGGAGCAGCAGGGCATGGAAGC...CCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACCAGCAAGCCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR GCA 90 bp GGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTACCGGGCTTTGTAGATaGTCCTCTCGCTGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: GSWAQSSGARILLWALLTTGLCR*SSRWRC
Trigger: ACACCTCCAGCGAGAGGAGCATCTACAAAGCCCGGT...AGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp GCCGCCCACCAGCGCCTGGGGCTTCTTCGATGTCTCCATCCTCCAATTTCAGGGACCGGGCTTTGTAGATaGTCCTCTCGCTGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: AAHQRLGLLRCLHPPISGTGLCR*SSRWRC
Trigger: ACACCTCCAGCGAGAGGAGCATCTACAAAGCCCGGT...CCCTGAAATTGGAGGATGGAGACATCGAAGAAGCCCCAGGCGCTGGTGGGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR GCA 90 bp GCTGGTATCAGTGGCTCCTTGGGCTCTGGTGCAAGGCTTCGCTGGGCCCGGAGCCTTCTCTGTTTCTGCTaGCGCCACATTCTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: AGISGSLGSGARLRWARSLLCFC*RHILQE
Trigger: TTCCTGGAGAATGTGGCGGCAGCAGAAACAGAGAAG...GCTCCGGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR GCA 90 bp GCCGCCCACCAGCGCCTGGGGCTTCTTCGATGTCTCCATCCTCCAATTTCAGGGCTCAGCCTTGGGGCTTaGTGGTATCAGTGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: AAHQRLGLLRCLHPPISGLSLGA*WYQWLL
Trigger: AAGGAGCCACTGATACCAGCAAGCCCCAAGGCTGAG...CCCTGAAATTGGAGGATGGAGACATCGAAGAAGCCCCAGGCGCTGGTGGGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR GCA 90 bp ATGGGCTCAGCCTTGGGGCTTGCTGGTATCAGTGGCTCCTTGGGCTCTGGTGCAAATAGAGAGCCTGGGTaGACGGGTAGGGAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: MGSALGLAGISGSLGSGANREPG*TGRELP
Trigger: TGGGAGCTCCCTACCCGTGCACCCAGGCTCTCTATT...TGCACCAGAGCCCAAGGAGCCACTGATACCAGCAAGCCCCAAGGCTGAGCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR GCA 90 bp GTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACAGCACCGCTGGGGCCAGCTCATaGTTGGCCAAGCTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: VISCTAVQGPDRFPGYSTAGASS*LAKLRR
Trigger: CCTGCGGAGCTTGGCCAAGCATGAGCTGGCCCCAGC...GGTGCTGTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp CACTCTGTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACCCCGGCCTGGCCCGCTaGTCACTGCTACTGGGACAG +
Preference number: 4 (lower is better)
Translates to: HSVISCTAVQGPDRFPGYPGLAR*SLLLGQ
Trigger: CTGTCCCAGTAGCAGTGAGCAGCGGGCCAGGCCGGG...GTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGACAGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp AGGCATGGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCTCAAAGACTTGCGGTTaGCGCGGGAACGCTTGCGTT +
Preference number: 4 (lower is better)
Translates to: RHGSWAQSSGARILLWALSKTCG*RGNACV
Trigger: AACGCAAGCGTTCCCGCGGCAACCGCAAGTCTTTGA...GAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCCATGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp GGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTTCCTTCTCAAAGACTTaGGGTTGCCGCGGGAACGCT +
Preference number: 4 (lower is better)
Translates to: GSWAQSSGARILLWALLTSFSKT*GCRGNA
Trigger: AGCGTTCCCGCGGCAACCGCAAGTCTTTGAGAAGGA...AGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp ACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGCTCCTTCCCCGCCCGCCATaGCTCTGCGGCCGGCTCACG +
Preference number: 4 (lower is better)
Translates to: THTLTCIHTRLILLKAWLLPRPP*LCGRLT
Trigger: CGTGAGCCGGCCGCAGAGCCATGGCGGGCGGGGAAG...GAGCCATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp GGCTTGCTGGTATCAGTGGCTCCTTGGGCTCTGGTGCAAGGCTTCGCTGGGCCCACAAAGAGCATCAGCTaGCCGAGCGCTCTAAGGATG +
Preference number: 4 (lower is better)
Translates to: GLLVSVAPWALVQGFAGPTKSIS*PSALRM
Trigger: CATCCTTAGAGCGCTCGGCCAGCTGATGCTCTTTGT...GGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACCAGCAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR CCA 90 bp AGCGGCTTGCAGAGACTCCATGGCCCCCAGCCAGCTTCAGCTCACGCCAGAAAACCAAGCGGGACAGGCTaGCACACAATGTGTACAGCC +
Preference number: 4 (lower is better)
Translates to: SGLQRLHGPQPASAHARKPSGTG*HTMCTA
Trigger: GGCTGTACACATTGTGTGCCAGCCTGTCCCGCTTGG...TTTTCTGGCGTGAGCTGAAGCTGGCTGGGGGCCATGGAGTCTCTGCAAGCCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR CCA 90 bp GAGGGAGCTGGGATGTCTTTCCCAGCCTCCACAGACTCTACATTCAGCATGTCCGTCCACCCGCCTCATTaGGCATGGCCCCGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: EGAGMSFPASTDSTFSMSVHPPH*AWPRQV
Trigger: CACTTGCCGGGGCCATGCCCAATGAGGCGGGTGGAC...GGACATGCTGAATGTAGAGTCTGTGGAGGCTGGGAAAGACATCCCAGCTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR CCA 90 bp CCAGCGCTTCCATGCCCTGCTGCTCCAGTGCATCCGTCACATCGTAGAAGGAGTGAGTTGCCGGGCATCTaGGTGTCCACCCGCCTCATT +
Preference number: 4 (lower is better)
Translates to: PALPCPAAPVHPSHRRRSELPGI*VSTRLI
Trigger: AATGAGGCGGGTGGACACCCAGATGCCCGGCAACTC...ACTCCTTCTACGATGTGACGGATGCACTGGAGCAGCAGGGCATGGAAGCGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR CCA 90 bp GTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACAGCACCGGTGCAAGGCTTCGCTaGGCCCGGAGCAGGACACAG +
Preference number: 4 (lower is better)
Translates to: VISCTAVQGPDRFPGYSTGARLR*ARSRTQ
Trigger: CTGTGTCCTGCTCCGGGCCCAGCGAAGCCTTGCACC...GGTGCTGTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp CCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTCTGTAGCCTTGGGGCTTGCTaGTATCAGTGGCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PGHRVLGPEFCSGPSSLCSLGAC*YQWLLG
Trigger: CCCAAGGAGCCACTGATACCAGCAAGCCCCAAGGCT...ACAGAGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp ATGGGCTCAGCCTTGGGGCTTGCTGGTATCAGTGGCTCCTTGGGCTCTGGTGCAAGCCTTGGGGCTTGCTaGTATCAGTGGCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: MGSALGLAGISGSLGSGASLGAC*YQWLLG
Trigger: CCCAAGGAGCCACTGATACCAGCAAGCCCCAAGGCT...TGCACCAGAGCCCAAGGAGCCACTGATACCAGCAAGCCCCAAGGCTGAGCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR CCA 90 bp AGATGGGCTCAGCCTTGGGGCTTGCTGGTATCAGTGGCTCCTTGGGCTCTGGTGAGCCTTGGGGCTTGCTaGTATCAGTGGCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: RWAQPWGLLVSVAPWALVSLGAC*YQWLLG
Trigger: CCCAAGGAGCCACTGATACCAGCAAGCCCCAAGGCT...CACCAGAGCCCAAGGAGCCACTGATACCAGCAAGCCCCAAGGCTGAGCCCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR CCA 90 bp AGGCATGGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCAGATGGGCTCAGCCTTaGGGCTTGCTGGTATCAGTG +
Preference number: 4 (lower is better)
Translates to: RHGSWAQSSGARILLWALRWAQP*GLLVSV
Trigger: CACTGATACCAGCAAGCCCCAAGGCTGAGCCCATCT...GAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCCATGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp GGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTCCTCTCCAGCTTTCTTaGAGGGCAGCACCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: GSWAQSSGARILLWALLTPLQLS*RAAPLW
Trigger: CCAAAGAGGTGCTGCCCTCCAAGAAAGCTGGAGAGG...AGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp CAGAGTTGTAGACGAGCAGCGAGGCCGCCAATGGAGGCAAGAGTCATCAGGAAGTGGGGTCCAGCACTGTaGTCATTGTCCGGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: QSCRRAARPPMEARVIRKWGPAL*SLSGGP
Trigger: AGGGCCGCCGGACAATGACCACAGTGCTGGACCCCA...CTTCCTGATGACTCTTGCCTCCATTGGCGGCCTCGCTGCTCGTCTACAACTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567509.1
CDS-3UTR CCA 90 bp AGGCCCAGAGTTGTAGACGAGCAGCGAGGCCGCCAATGGAGGCAAGAGTCATCATGGCGTTGCTGCGCTTaGGGTCCAGCACTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: RPRVVDEQRGRQWRQESSWRCCA*GPALWS
Trigger: TGACCACAGTGCTGGACCCCAAGCGCAGCAACGCCA...TGATGACTCTTGCCTCCATTGGCGGCCTCGCTGCTCGTCTACAACTCTGGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567509.1
CDS-3UTR CCA 90 bp TTGAAGGCCCAGAGTTGTAGACGAGCAGCGAGGCCGCCAATGGAGGCAAGAGTCCAGGAAGTTCTCGGCTaGGCCCAGGGGTATGTCAGG +
Preference number: 4 (lower is better)
Translates to: LKAQSCRRAARPPMEARVQEVLG*AQGYVR
Trigger: CCTGACATACCCCTGGGCCCAGCCGAGAACTTCCTG...GACTCTTGCCTCCATTGGCGGCCTCGCTGCTCGTCTACAACTCTGGGCCTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567509.1
ENST00000567561.1
CDS-3UTR CCA 90 bp TCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTCTGGTTCAAAGTCCACCTTaGCACAGCGGGTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SWAQSSGARILLWALLTLVQSPP*HSGSGQ
Trigger: CTGCCCTGACCCGCTGTGCCAAGGTGGACTTTGAAC...CAGAGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp AGGCATGGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCGCACTATCCTTAGCATaGCAACACGGCGGGCACACT +
Preference number: 4 (lower is better)
Translates to: RHGSWAQSSGARILLWALALSLA*QHGGHT
Trigger: AGTGTGCCCGCCGTGTTGCCATGCTAAGGATAGTGC...GAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCCATGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
3UTR CAA 72 bp AGCTGTTCAAAGTCCACCTGGGAGCCATTGAGGAAGTaGCCCACCGCTAGGAGGGTAGCCAGGATGCAGCGG +
Preference number: 4 (lower is better)
Translates to: SCSKSTWEPLRK*PTARRVARMQR
Trigger: CCGCTGCATCCTGGCTACCCTCCTAGCGGTGGGCAACTTCCTCAATGGCTCCCAGGTGGACTTTGAACAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567561.1
CDS-3UTR TCA 90 bp AGGCATGGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCGCTTCCGCCCTTTGCTaGTCTCTTCATAGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: RHGSWAQSSGARILLWALASALC*SLHRSP
Trigger: AGGGCTTCTATGAAGAGATCAGCAAAGGGCGGAAGC...GAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCCATGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR TCA 90 bp AGGCAAGAGTCATCAGGAAGTTCTCGGCTGGGCCCAGGGGTATGTCAGGGTTGGTGGTTAGGCCGATGTTaGTGGCGTTGCTGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: RQESSGSSRLGPGVCQGWWLGRC*WRCCAW
Trigger: CCAAGCGCAGCAACGCCATCAACATCGGCCTAACCA...CCAACCCTGACATACCCCTGGGCCCAGCCGAGAACTTCCTGATGACTCTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567509.1
CDS-3UTR TCA 90 bp TGGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACCAGGGCAGGGATTTCTaGATAGAGGTCAGAGGACTC +
Preference number: 4 (lower is better)
Translates to: WLLGTEFWGQNSALGPPHQGRDF*IEVRGL
Trigger: GAGTCCTCTGACCTCTATTCAGAAATCCCTGCCCTG...GTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp TCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTCTGCGGAAAGTTGGCACATaGGAAGGGGTCGGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: SWAQSSGARILLWALLTLRKVGT*EGVGVF
Trigger: GAAGACACCGACCCCTTCGCATGTGCCAACTTTCCG...CAGAGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp TCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTCTGCTCAGCCTTGGGGCTTaGTGGTATCAGTGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: SWAQSSGARILLWALLTLLSLGA*WYQWLL
Trigger: AAGGAGCCACTGATACCAGCAAGCCCCAAGGCTGAG...CAGAGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp GTAGACGAGCAGCGAGGCCGCCAATGGAGGCAAGAGTCATCAGGAAGTTCTCGGGCTTCCTCAATCTTCTaGCGCTCTTCCTCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: VDEQRGRQWRQESSGSSRASSIF*RSSSVG
Trigger: GCCCACGGAGGAAGAGCGGCAGAAGATTGAGGAAGC...CCGAGAACTTCCTGATGACTCTTGCCTCCATTGGCGGCCTCGCTGCTCGTCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567509.1
ENST00000567561.1
CDS-3UTR GCA 90 bp GCAAATTCCCGCAGCGTGTGGCAGAACTGCATGATGCGCACTTCACGGGCCGCCAGGCATGGAACCTATTaGAGACACGGCGGTGCACTA +
Preference number: 4 (lower is better)
Translates to: ANSRSVWQNCMMRTSRAARHGTY*RHGGAL
Trigger: TAGTGCACCGCCGTGTCTGCAATAGGTTCCATGCCT...GGCGGCCCGTGAAGTGCGCATCATGCAGTTCTGCCACACGCTGCGGGAATTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567561.1
CDS-3UTR GCA 90 bp GGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTTATGTGGCCTGCTTCTaGTGCTGCTGTAGCACTCGT +
Preference number: 4 (lower is better)
Translates to: GSWAQSSGARILLWALLTYVACF*CCCSTR
Trigger: ACGAGTGCTACAGCAGCAGCAGAAGCAGGCCACATA...AGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp GGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTCTAAGGCACGAGGACTaGTCTTGGTCACTGACTGCA +
Preference number: 4 (lower is better)
Translates to: GSWAQSSGARILLWALLTLRHED*SWSLTA
Trigger: TGCAGTCAGTGACCAAGAGCAGTCCTCGTGCCTTAG...AGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp GTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACAGCACCTGGCTCCTTGGGCTCTaGTGCAAGGCTTCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: VISCTAVQGPDRFPGYSTWLLGL*CKASLG
Trigger: GCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCA...GGTGCTGTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp TTGGGGCTTGCTGGTATCAGTGGCTCCTTGGGCTCTGGTGCAAGGCTTCGCTGGGTATCAGTGGCTCCTTaGGCTCTGGTGCAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: LGLAGISGSLGSGARLRWVSVAP*ALVQGF
Trigger: GAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATAC...CCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACCAGCAAGCCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR CCA 90 bp GGCCGCCAATGGAGGCAAGAGTCATCAGGAAGTTCTCGGCTGGGCCCAGGGGTAAGGGCAGCACCTCTTTaGCACGAGACTCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: GRQWRQESSGSSRLGPGVRAAPL*HETQRG
Trigger: ACCTCTTTGAGTCTCGTGCCAAAGAGGTGCTGCCCT...TACCCCTGGGCCCAGCCGAGAACTTCCTGATGACTCTTGCCTCCATTGGCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567509.1
CDS-3UTR CCA 90 bp TGGAGGCAAGAGTCATCAGGAAGTTCTCGGCTGGGCCCAGGGGTATGTCAGGGTGGGGTATGTCAGGGTTaGCCAGCTGGGCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: WRQESSGSSRLGPGVCQGGVCQG*PAGLPQ
Trigger: TTGAGGAAGCCCAGCTGGCCAACCCTGACATACCCC...ACCCTGACATACCCCTGGGCCCAGCCGAGAACTTCCTGATGACTCTTGCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567509.1
ENST00000567561.1
CDS-3UTR CCA 90 bp CAGAGTTGTAGACGAGCAGCGAGGCCGCCAATGGAGGCAAGAGTCATCAGGAAGCAGGAAGTTCTCGGCTaGGCCCAGGGGTATGTCAGG +
Preference number: 4 (lower is better)
Translates to: QSCRRAARPPMEARVIRKQEVLG*AQGYVR
Trigger: CCTGACATACCCCTGGGCCCAGCCGAGAACTTCCTG...CTTCCTGATGACTCTTGCCTCCATTGGCGGCCTCGCTGCTCGTCTACAACTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567509.1
ENST00000567561.1
CDS-3UTR CCA 90 bp TGGAGGCAAGAGTCATCAGGAAGTTCTCGGCTGGGCCCAGGGGTATGTCAGGGTCAGCGAGGCCGCCAATaGAGGCAAGAGTCATCAGGA +
Preference number: 4 (lower is better)
Translates to: WRQESSGSSRLGPGVCQGQRGRQ*RQESSG
Trigger: TCCTGATGACTCTTGCCTCCATTGGCGGCCTCGCTG...ACCCTGACATACCCCTGGGCCCAGCCGAGAACTTCCTGATGACTCTTGCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567509.1
ENST00000567561.1
CDS-3UTR CCA 90 bp AAGGCCCAGAGTTGTAGACGAGCAGCGAGGCCGCCAATGGAGGCAAGAGTCATCCAGCGAGGCCGCCAATaGAGGCAAGAGTCATCAGGA +
Preference number: 4 (lower is better)
Translates to: KAQSCRRAARPPMEARVIQRGRQ*RQESSG
Trigger: TCCTGATGACTCTTGCCTCCATTGGCGGCCTCGCTG...GATGACTCTTGCCTCCATTGGCGGCCTCGCTGCTCGTCTACAACTCTGGGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567509.1
ENST00000567561.1
CDS-3UTR CCA 90 bp AGGCATGGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCGGATGCAGCGGAAGGTaGCATTCTGTACCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: RHGSWAQSSGARILLWALGCSGR*HSVPAV
Trigger: AACAGCTGGTACAGAATGCCACCTTCCGCTGCATCC...GAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCCATGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp GGCCGCCAATGGAGGCAAGAGTCATCAGGAAGTTCTCGGCTGGGCCCAGGGGTAGGATGCAGCGGAAGGTaGCATTCTGTACCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: GRQWRQESSGSSRLGPGVGCSGR*HSVPAV
Trigger: AACAGCTGGTACAGAATGCCACCTTCCGCTGCATCC...TACCCCTGGGCCCAGCCGAGAACTTCCTGATGACTCTTGCCTCCATTGGCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567509.1
ENST00000567561.1
CDS-3UTR CCA 90 bp ACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGCTCGCGGGCACGCAGGGCTaGGGCCAGCTCATGCTTGGC +
Preference number: 4 (lower is better)
Translates to: THTLTCIHTRLILLKAWLAGTQG*GQLMLG
Trigger: GCCAAGCATGAGCTGGCCCCAGCCCTGCGTGCCCGC...GAGCCATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp GTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACAGCACCACACGGCGGGCACACTaGTCCAGGAAGTGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: VISCTAVQGPDRFPGYSTTRRAH*SRKWVR
Trigger: CCTCACCCACTTCCTGGACCAGTGTGCCCGCCGTGT...GGTGCTGTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp CGGGGTGTAGCCCAGGTAGAGCAGGAAGGCATGGAACCTATTGCAGACACGGCGGCACTATCCTTAGCATaGCAACACGGCGGGCACACT +
Preference number: 4 (lower is better)
Translates to: RGVAQVEQEGMEPIADTAALSLA*QHGGHT
Trigger: AGTGTGCCCGCCGTGTTGCCATGCTAAGGATAGTGC...CGCCGTGTCTGCAATAGGTTCCATGCCTTCCTGCTCTACCTGGGCTACACCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567561.1
CDS-3UTR CCA 90 bp CACTCTGTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACAGCATCTCCCCGGCCTaGCCCGCTGCTCACTGCTAC +
Preference number: 4 (lower is better)
Translates to: HSVISCTAVQGPDRFPGYSISPA*PAAHCY
Trigger: GTAGCAGTGAGCAGCGGGCCAGGCCGGGGAGATGCT...GTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGACAGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp AGCAGCGAGGCCGCCAATGGAGGCAAGAGTCATCAGGAAGTTCTCGGCTGGGCCCCTCCGTGGGCATCATaGTCAGTAGCTTCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: SSEAANGGKSHQEVLGWAPPWAS*SVASED
Trigger: ATCCTCAGAAGCTACTGACCATGATGCCCACGGAGG...GGCCCAGCCGAGAACTTCCTGATGACTCTTGCCTCCATTGGCGGCCTCGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567509.1
ENST00000567561.1
CDS-3UTR TCA 90 bp AGGCATGGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCAGTTCACTGCACGGATaGACAGCGGTGCGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: RHGSWAQSSGARILLWALSSLHG*TAVRCF
Trigger: AAAACAACGCACCGCTGTTCATCCGTGCAGTGAACT...GAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCCATGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR TCA 90 bp TCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTCTGAGGAAAAAGGTTCACTaGAGCTTGGAGACCGGAGGG +
Preference number: 4 (lower is better)
Translates to: SWAQSSGARILLWALLTLRKKVH*SLETGG
Trigger: CCCTCCGGTCTCCAAGCTTCAGTGAACCTTTTTCCT...CAGAGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR TCA 90 bp CCGGCGCTCCAGCTGCCCCAGGTTCTCAGTCAGCTGTTCAAAGTCCACCTGGGACTGAGGCATTGGTCTTaGCCCCTCAGTCATCTCAAT +
Preference number: 4 (lower is better)
Translates to: PALQLPQVLSQLFKVHLGLRHWS*PLSHLN
Trigger: ATTGAGATGACTGAGGGGTCAAGACCAATGCCTCAG...TCCCAGGTGGACTTTGAACAGCTGACTGAGAACCTGGGGCAGCTGGAGCGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567561.1
CDS-3UTR GCA 90 bp GTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACAGCACCTCCAGCATCTCCCGCTaGTCTTCCAGGGACAGCTCG +
Preference number: 4 (lower is better)
Translates to: VISCTAVQGPDRFPGYSTSSISR*SSRDSS
Trigger: CGAGCTGTCCCTGGAAGAGCAGCGGGAGATGCTGGA...GGTGCTGTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp CCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTCTGTCTCAGCCCCTCTGAATaGACAAATTCAGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: PGHRVLGPEFCSGPSSLCLSPSE*TNSGTR
Trigger: CCTGGTGCCTGAATTTGTGCATTCAGAGGGGCTGAG...ACAGAGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp CACTCTGTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACGGGGAGTCCCAGAGTTaGCGGGCATCTGGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: HSVISCTAVQGPDRFPGYGESQS*RASGCP
Trigger: TGGACACCCAGATGCCCGGCAACTCTGGGACTCCCC...GTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGACAGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp CAGCTGTTCCATACCCACTTTCAGGTCAAACAGTGGCTCAGCAATTTCCCGCTCCTCCGGCGCTCCAGCTaGCCCAGGTTCTCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: QLFHTHFQVKQWLSNFPLLRRSS*PRFSVS
Trigger: GCTGACTGAGAACCTGGGGCAGCTGGAGCGCCGGAG...GAGCGGGAAATTGCTGAGCCACTGTTTGACCTGAAAGTGGGTATGGAACAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567561.1
CDS-3UTR GCA 90 bp CGGTGCACTATCCTTAGCATGGCAACACGGCGGGCACACTGGTCCAGGAAGTGGTTGCAGACACGGCGGTaGACTATCCTTAGCATGGCA +
Preference number: 4 (lower is better)
Translates to: RCTILSMATRRAHWSRKWLQTRR*TILSMA
Trigger: TGCCATGCTAAGGATAGTGCACCGCCGTGTCTGCAA...CCACTTCCTGGACCAGTGTGCCCGCCGTGTTGCCATGCTAAGGATAGTGCACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567561.1
CDS-3UTR GCA 90 bp TCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTCTGAGGCATGGAACCTATTaGAGACACGGCGGTGCACTA +
Preference number: 4 (lower is better)
Translates to: SWAQSSGARILLWALLTLRHGTY*RHGGAL
Trigger: TAGTGCACCGCCGTGTCTGCAATAGGTTCCATGCCT...CAGAGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp GTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACAGCACCGTCCCCGGGTCTTGTTaGGCTCACGGTATGTGGCCT +
Preference number: 4 (lower is better)
Translates to: VISCTAVQGPDRFPGYSTVPGSC*AHGMWP
Trigger: AGGCCACATACCGTGAGCGCAACAAGACCCGGGGAC...GGTGCTGTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp AGGCATGGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCGGAGCTCAGGACCACTaGAGCTATACAGCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: RHGSWAQSSGARILLWALGAQDH*SYTAFP
Trigger: TGGAAAAGCTGTATAGCTCCAGTGGTCCTGAGCTCC...GAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCCATGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp CACTCTGTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACCCGCCTCATTGGGCATaGCCCCGGCAAGTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: HSVISCTAVQGPDRFPGYPPHWA*PRQVSL
Trigger: CAGAGACACTTGCCGGGGCCATGCCCAATGAGGCGG...GTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGACAGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp AGGGAGCTGGGATGTCTTTCCCAGCCTCCACAGACTCTACATTCAGCATGTCCTTGCAGGGGCTGTCTCTaGGGAGTCCCAGAGTTGCCG +
Preference number: 4 (lower is better)
Translates to: RELGCLSQPPQTLHSACPCRGCL*GVPELP
Trigger: CGGCAACTCTGGGACTCCCCAGAGACAGCCCCTGCA...AGGACATGCTGAATGTAGAGTCTGTGGAGGCTGGGAAAGACATCCCAGCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR CCA 90 bp CTGGTATCAGTGGCTCCTTGGGCTCTGGTGCAAGGCTTCGCTGGGCCCGGAGCAACATTCAGCATGTCCTaGTCTTCATCCTCCCCTAGA +
Preference number: 4 (lower is better)
Translates to: LVSVAPWALVQGFAGPGATFSMS*SSSSPR
Trigger: TCTAGGGGAGGATGAAGACCAGGACATGCTGAATGT...TGCTCCGGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR CCA 90 bp GGTAGCCAGGATGCAGCGGAAGGTGGCATTCTGTACCAGCTGTTCCATACCCACGCCGCTCTTCCTCCGTaGGCATCATGGTCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: GSQDAAEGGILYQLFHTHAALPP*ASWSVA
Trigger: AGCTACTGACCATGATGCCCACGGAGGAAGAGCGGC...GTGGGTATGGAACAGCTGGTACAGAATGCCACCTTCCGCTGCATCCTGGCTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567509.1
ENST00000567561.1
CDS-3UTR CCA 90 bp GGGCCGCCTGCGGGGTGTAGCCCAGGTAGAGCAGGAAGGCATGGAACCTATTGCTTTCAGGTCAAACAGTaGCTCAGCAATTTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: GPPAGCSPGRAGRHGTYCFQVKQ*LSNFPL
Trigger: GAGCGGGAAATTGCTGAGCCACTGTTTGACCTGAAA...GCAATAGGTTCCATGCCTTCCTGCTCTACCTGGGCTACACCCCGCAGGCGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567561.1
CDS-3UTR CCA 90 bp CCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTCTGTTCAAAGCCGCTGCTCTaGGAGCCATTGAGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: PGHRVLGPEFCSGPSSLCSKPLL*EPLRKL
Trigger: CAACTTCCTCAATGGCTCCCAGAGCAGCGGCTTTGA...ACAGAGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp CCAGGATGCAGCGGAAGGTGGCATTCTGTACCAGCTGTTCCATACCCACTTTCAGGGCCAGCTCATGCTTaGCCAAGCTCCGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: PGCSGRWHSVPAVPYPLSGPAHA*PSSAGS
Trigger: AGAGCCTGCGGAGCTTGGCCAAGCATGAGCTGGCCC...TGAAAGTGGGTATGGAACAGCTGGTACAGAATGCCACCTTCCGCTGCATCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567561.1
CDS-3UTR CCA 90 bp GATGCAGCGGAAGGTGGCATTCTGTACCAGCTGTTCCATACCCACTTTCAGGTCACACGGCGGGCACACTaGTCCAGGAAGTGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: DAAEGGILYQLFHTHFQVTRRAH*SRKWVR
Trigger: CCTCACCCACTTCCTGGACCAGTGTGCCCGCCGTGT...GACCTGAAAGTGGGTATGGAACAGCTGGTACAGAATGCCACCTTCCGCTGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567561.1
CDS-3UTR CCA 90 bp GTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACAGCACCATTGGGGAGCTGCTCTaGACCATGCCTCTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: VISCTAVQGPDRFPGYSTIGELL*TMPLLR
Trigger: CCGCAGCAGAGGCATGGTCCAGAGCAGCTCCCCAAT...GGTGCTGTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR TCA 90 bp CCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTCTGTAATGTGTACAGCCACTaGATAGTGTCACTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: PGHRVLGPEFCSGPSSLCNVYSH*IVSLWA
Trigger: GGCCCACAGTGACACTATTCAGTGGCTGTACACATT...ACAGAGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR TCA 90 bp AGCAGGAAGGCATGGAACCTATTGCAGACACGGCGGTGCACTATCCTTAGCATGTGTGGCAGAACTGCATaGTGCGCACTTCACGGGCCG +
Preference number: 4 (lower is better)
Translates to: SRKAWNLLQTRRCTILSMCGRTA*CALHGP
Trigger: CGGCCCGTGAAGTGCGCATCATGCAGTTCTGCCACA...CATGCTAAGGATAGTGCACCGCCGTGTCTGCAATAGGTTCCATGCCTTCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567561.1
CDS-3UTR GCA 90 bp CTGTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACAGCAAGAGCACAAGCTGCGTaGGCAGGTCGACGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: LSSPALQSRVQIDFRDTARAQAA*AGRRQC
Trigger: GCACTGACGTCGACCTGCGCACGCAGCTTGTGCTCT...TGCTGTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp AGGGAGCTGGGATGTCTTTCCCAGCCTCCACAGACTCTACATTCAGCATGTCCTAGAGCACAAGCTGCGTaGGCAGGTCGACGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: RELGCLSQPPQTLHSACPRAQAA*AGRRQC
Trigger: GCACTGACGTCGACCTGCGCACGCAGCTTGTGCTCT...AGGACATGCTGAATGTAGAGTCTGTGGAGGCTGGGAAAGACATCCCAGCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR GCA 90 bp GTAGGAAAAAGGTTCACTGAAGCTTGGAGACCGGAGGGAGGGCCCACAGGGCTGCTGCTTCTCTGTTTCTaGTGCCGCCACATTCTCCAG +
Preference number: 4 (lower is better)
Translates to: VGKRFTEAWRPEGGPTGLLLLCF*CRHILQ
Trigger: CTGGAGAATGTGGCGGCAGCAGAAACAGAGAAGCAG...CAGCCCTGTGGGCCCTCCCTCCGGTCTCCAAGCTTCAGTGAACCTTTTTCCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR GCA 90 bp ACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGCTCCTCCTTGGGCTCTGGTaGAAGGCTTCGCTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: THTLTCIHTRLILLKAWLLLGLW*KASLGP
Trigger: CGGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAG...GAGCCATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp TCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTCTGGCAGCCTTAATGACATaGACAGGTGGCAGTGTGGTT +
Preference number: 4 (lower is better)
Translates to: SWAQSSGARILLWALLTLAALMT*TGGSVV
Trigger: AACCACACTGCCACCTGTGCATGTCATTAAGGCTGC...CAGAGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp CAATGGAGGCAAGAGTCATCAGGAAGTTCTCGGCTGGGCCCAGGGGTATGTCAGAGCGTGTGGCAGAACTaGATGATGCGCACTTCACGG +
Preference number: 4 (lower is better)
Translates to: QWRQESSGSSRLGPGVCQSVWQN*MMRTSR
Trigger: CCGTGAAGTGCGCATCATGCAGTTCTGCCACACGCT...CTGACATACCCCTGGGCCCAGCCGAGAACTTCCTGATGACTCTTGCCTCCATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567561.1
CDS-3UTR GCA 90 bp GTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACAGCACCTCTGGACCATGCCTCTaGTGCGGCGATTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: VISCTAVQGPDRFPGYSTSGPCL*CGDCVW
Trigger: CCACACACAATCGCCGCAGCAGAGGCATGGTCCAGA...GGTGCTGTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp TGGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACAGGTCTTTGTCCTCCTaGAAGATCTGCTTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: WLLGTEFWGQNSALGPPHRSLSS*KICFSE
Trigger: CTCACTGAAGCAGATCTTCCAGGAGGACAAAGACCT...GTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp ACATACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGAGGGCCCACAGGGCTaGAGGCGGGGCCTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: TYTHTHMHTHTANTAQGMEGPQG*RRGLSA
Trigger: TGCTGACAGGCCCCGCCTCCAGCCCTGTGGGCCCTC...CATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGTATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp GTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACAGCACCAGATGCTCCTCTCGCTaGAGGTGTCAGCTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: VISCTAVQGPDRFPGYSTRCSSR*RCQLRV
Trigger: CACCCTCAGCTGACACCTCCAGCGAGAGGAGCATCT...GGTGCTGTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp CATTCAGCATGTCCTGGTCTTCATCCTCCCCTAGATCTGAAAAGTCCAGGTCCCTGCAGGGGCTGTCTCTaGGGAGTCCCAGAGTTGCCG +
Preference number: 4 (lower is better)
Translates to: HSACPGLHPPLDLKSPGPCRGCL*GVPELP
Trigger: CGGCAACTCTGGGACTCCCCAGAGACAGCCCCTGCA...GGGACCTGGACTTTTCAGATCTAGGGGAGGATGAAGACCAGGACATGCTGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR CCA 90 bp CAATGGAGGCAAGAGTCATCAGGAAGTTCTCGGCTGGGCCCAGGGGTATGTCAGCCTCTCCAGCTTTCTTaGAGGGCAGCACCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: QWRQESSGSSRLGPGVCQPLQLS*RAAPLW
Trigger: CCAAAGAGGTGCTGCCCTCCAAGAAAGCTGGAGAGG...CTGACATACCCCTGGGCCCAGCCGAGAACTTCCTGATGACTCTTGCCTCCATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567509.1
CDS-3UTR CCA 90 bp CACTCTGTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACCAGGAAGTTCTCGGCTaGGCCCAGGGGTATGTCAGG +
Preference number: 4 (lower is better)
Translates to: HSVISCTAVQGPDRFPGYQEVLG*AQGYVR
Trigger: CCTGACATACCCCTGGGCCCAGCCGAGAACTTCCTG...GTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGACAGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp CCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTCTGTTATCACTGGGTAAACTaGAGCCTGGGGGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: PGHRVLGPEFCSGPSSLCYHWVN*SLGVLL
Trigger: CAGAAGAACCCCCAGGCTCCAGTTTACCCAGTGATA...ACAGAGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp CTGTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACAGCATCAAGGCATGGCTCCTaGGCACAGAGTTCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: LSSPALQSRVQIDFRDTASRHGS*AQSSGA
Trigger: GGCCCCAGAACTCTGTGCCCAGGAGCCATGCCTTGA...TGCTGTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp GCAAATTCCCGCAGCGTGTGGCAGAACTGCATGATGCGCACTTCACGGGCCGCCTGTTCAAAGTCCACCTaGGAGCCATTGAGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: ANSRSVWQNCMMRTSRAACSKST*EPLRKL
Trigger: CAACTTCCTCAATGGCTCCCAGGTGGACTTTGAACA...GGCGGCCCGTGAAGTGCGCATCATGCAGTTCTGCCACACGCTGCGGGAATTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567561.1
CDS-3UTR TCA 90 bp TCTGAAAAGTCCAGGTCCCCAATAGAGAGCCTGGGTGCACGGGTAGGGAGCTCCAGTTCACTGCACGGATaGACAGCGGTGCGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: SEKSRSPIESLGARVGSSSSLHG*TAVRCF
Trigger: AAAACAACGCACCGCTGTTCATCCGTGCAGTGAACT...GGAGCTCCCTACCCGTGCACCCAGGCTCTCTATTGGGGACCTGGACTTTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR TCA 90 bp CTGTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACAGCATGGTTAGGCCGATGTTaGTGGCGTTGCTGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: LSSPALQSRVQIDFRDTAWLGRC*WRCCAW
Trigger: CCAAGCGCAGCAACGCCATCAACATCGGCCTAACCA...TGCTGTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR TCA 90 bp AGGCATGGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCAATGCCATCCTTGCTaGCAGCAAACTCATCAAAGT +
Preference number: 4 (lower is better)
Translates to: RHGSWAQSSGARILLWALQCHPC*QQTHQS
Trigger: ACTTTGATGAGTTTGCTGTCAGCAAGGATGGCATTG...GAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCCATGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp ATGGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCAACGGATGAACAGCGGTaGGTTGTTTTCGGAGTATTC +
Preference number: 4 (lower is better)
Translates to: MAPGHRVLGPEFCSGPSSTDEQR*VVFGVF
Trigger: GAATACTCCGAAAACAACGCACCGCTGTTCATCCGT...TGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp AGGGAGCTGGGATGTCTTTCCCAGCCTCCACAGACTCTACATTCAGCATGTCCTGGCCACAGAGTTCACTaGACGGATGAACAGCGGTGC +
Preference number: 4 (lower is better)
Translates to: RELGCLSQPPQTLHSACPGHRVH*TDEQRC
Trigger: GCACCGCTGTTCATCCGTGCAGTGAACTCTGTGGCC...AGGACATGCTGAATGTAGAGTCTGTGGAGGCTGGGAAAGACATCCCAGCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR GCA 90 bp TCTGAAAAGTCCAGGTCCCCAATAGAGAGCCTGGGTGCACGGGTAGGGAGCTCCCTTCTCTGTTTCTGCTaGCGCCACATTCTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: SEKSRSPIESLGARVGSSLLCFC*RHILQE
Trigger: TTCCTGGAGAATGTGGCGGCAGCAGAAACAGAGAAG...GGAGCTCCCTACCCGTGCACCCAGGCTCTCTATTGGGGACCTGGACTTTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR CCA 90 bp CTGTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACAGCAACCCTCACAGAGAGCTaGGTCCGAAGGATCAGCGTG +
Preference number: 4 (lower is better)
Translates to: LSSPALQSRVQIDFRDTATLTES*VRRISV
Trigger: CACGCTGATCCTTCGGACCCAGCTCTCTGTGAGGGT...TGCTGTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp CTGTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACAGCACCAAGCGGGACAGGCTaGCACACAATGTGTACAGCC +
Preference number: 4 (lower is better)
Translates to: LSSPALQSRVQIDFRDTAPSGTG*HTMCTA
Trigger: GGCTGTACACATTGTGTGCCAGCCTGTCCCGCTTGG...TGCTGTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp TCTACATTCAGCATGTCCTGGTCTTCATCCTCCCCTAGATCTGAAAAGTCCAGGCCGCCCACCAGCGCCTaGGGCTTCTTCGATGTCTCC +
Preference number: 4 (lower is better)
Translates to: STFSMSWSSSSPRSEKSRPPTSA*GFFDVS
Trigger: GGAGACATCGAAGAAGCCCCAGGCGCTGGTGGGCGG...CCTGGACTTTTCAGATCTAGGGGAGGATGAAGACCAGGACATGCTGAATGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR CCA 90 bp ACATTCAGCATGTCCTGGTCTTCATCCTCCCCTAGATCTGAAAAGTCCAGGTCCTGGCTCCTTGGGCTCTaGTGCAAGGCTTCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TFSMSWSSSSPRSEKSRSWLLGL*CKASLG
Trigger: GCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCA...GGACCTGGACTTTTCAGATCTAGGGGAGGATGAAGACCAGGACATGCTGAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR CCA 90 bp CTGTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACAGCAGCCGCTCTTCCTCCGTaGGCATCATGGTCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: LSSPALQSRVQIDFRDTAAALPP*ASWSVA
Trigger: AGCTACTGACCATGATGCCCACGGAGGAAGAGCGGC...TGCTGTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp GATGCAGCGGAAGGTGGCATTCTGTACCAGCTGTTCCATACCCACTTTCAGGTCGGGGTATGTCAGGGTTaGCCAGCTGGGCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: DAAEGGILYQLFHTHFQVGVCQG*PAGLPQ
Trigger: TTGAGGAAGCCCAGCTGGCCAACCCTGACATACCCC...GACCTGAAAGTGGGTATGGAACAGCTGGTACAGAATGCCACCTTCCGCTGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567509.1
ENST00000567561.1
CDS-3UTR CCA 90 bp TCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTCTGTTTCAGGTCAAACAGTaGCTCAGCAATTTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: SWAQSSGARILLWALLTLFQVKQ*LSNFPL
Trigger: GAGCGGGAAATTGCTGAGCCACTGTTTGACCTGAAA...CAGAGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR TCA 90 bp ACATACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGCCTCACGGTCACCACTaGTACCGGCTCTCCGTCCCC +
Preference number: 4 (lower is better)
Translates to: TYTHTHMHTHTANTAQGMPHGHH*YRLSVP
Trigger: GGGGACGGAGAGCCGGTATCAGTGGTGACCGTGAGG...CATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGTATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR TCA 90 bp CACTCTGTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACCGTGTCCTTCACCTCTaGCACCTTCTCCAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: HSVISCTAVQGPDRFPGYRVLHL*HLLQVA
Trigger: AGCTACCTGGAGAAGGTGTCAGAGGTGAAGGACACG...GTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGACAGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp ACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGCTCGGACCAGCGCTTCCATaGCCTGCTGCTCCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: THTLTCIHTRLILLKAWLGPALP*PAAPVH
Trigger: ATGCACTGGAGCAGCAGGGCATGGAAGCGCTGGTCC...GAGCCATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp CAGAGTTGTAGACGAGCAGCGAGGCCGCCAATGGAGGCAAGAGTCATCAGGAAGGCAGCCTTAATGACATaGACAGGTGGCAGTGTGGTT +
Preference number: 4 (lower is better)
Translates to: QSCRRAARPPMEARVIRKAALMT*TGGSVV
Trigger: AACCACACTGCCACCTGTGCATGTCATTAAGGCTGC...CTTCCTGATGACTCTTGCCTCCATTGGCGGCCTCGCTGCTCGTCTACAACTCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567509.1
CDS-3UTR GCA 90 bp CAGCTGTTCCATACCCACTTTCAGGTCAAACAGTGGCTCAGCAATTTCCCGCTCGCTTCCTCAATCTTCTaGCGCTCTTCCTCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: QLFHTHFQVKQWLSNFPLASSIF*RSSSVG
Trigger: GCCCACGGAGGAAGAGCGGCAGAAGATTGAGGAAGC...GAGCGGGAAATTGCTGAGCCACTGTTTGACCTGAAAGTGGGTATGGAACAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567509.1
ENST00000567561.1
CDS-3UTR GCA 90 bp ACATACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGCTCCGGCGCTCCAGCTaGCCCAGGTTCTCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: TYTHTHMHTHTANTAQGMLRRSS*PRFSVS
Trigger: GCTGACTGAGAACCTGGGGCAGCTGGAGCGCCGGAG...CATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGTATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp TACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGCTTGGGGTCCAGCACTGTaGTCATTGTCCGGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: YTHTHMHTHTANTAQGMAWGPAL*SLSGGP
Trigger: AGGGCCGCCGGACAATGACCACAGTGCTGGACCCCA...AGCCATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp CAGCTGTTCCATACCCACTTTCAGGTCAAACAGTGGCTCAGCAATTTCCCGCTCTGCGCTCACGGTATGTaGCCTGCTTCTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: QLFHTHFQVKQWLSNFPLCAHGM*PASAAA
Trigger: AGCAGCAGCAGAAGCAGGCCACATACCGTGAGCGCA...GAGCGGGAAATTGCTGAGCCACTGTTTGACCTGAAAGTGGGTATGGAACAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567561.1
CDS-3UTR TCA 90 bp ACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGCTCTGCTCTGGGAGCCATTaGGGAAGTTGCCCACCGCTA +
Preference number: 4 (lower is better)
Translates to: THTLTCIHTRLILLKAWLCSGSH*GSCPPL
Trigger: TAGCGGTGGGCAACTTCCTCAATGGCTCCCAGAGCA...GAGCCATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp GTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACAGCACCCTTCTCTGTTTCTGCTaGCGCCACATTCTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: VISCTAVQGPDRFPGYSTLLCFC*RHILQE
Trigger: TTCCTGGAGAATGTGGCGGCAGCAGAAACAGAGAAG...GGTGCTGTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp CTGTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACAGCATTGCAGACACGGCGGTaGACTATCCTTAGCATGGCA +
Preference number: 4 (lower is better)
Translates to: LSSPALQSRVQIDFRDTALQTRR*TILSMA
Trigger: TGCCATGCTAAGGATAGTGCACCGCCGTGTCTGCAA...TGCTGTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp CTGTACCAGCTGTTCCATACCCACTTTCAGGTCAAACAGTGGCTCAGCAATTTCGCCTGCTTCTGCTGCTaGTGTAGCACTCGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: LYQLFHTHFQVKQWLSNFACFCC*CSTRSR
Trigger: CCGGGAACGAGTGCTACAGCAGCAGCAGAAGCAGGC...GAAATTGCTGAGCCACTGTTTGACCTGAAAGTGGGTATGGAACAGCTGGTACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567561.1
CDS-3UTR GCA 90 bp GTACCAGCTGTTCCATACCCACTTTCAGGTCAAACAGTGGCTCAGCAATTTCCCGTGGCCTGCTTCTGCTaGTGCTGTAGCACTCGTTCC +
Preference number: 4 (lower is better)
Translates to: VPAVPYPLSGQTVAQQFPVACFC*CCSTRS
Trigger: GGAACGAGTGCTACAGCAGCAGCAGAAGCAGGCCAC...GGGAAATTGCTGAGCCACTGTTTGACCTGAAAGTGGGTATGGAACAGCTGGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567561.1
CDS-3UTR CCA 90 bp TACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGCTAGGTTCACTGAAGCTTaGAGACCGGAGGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: YTHTHMHTHTANTAQGMARFTEA*RPEGGP
Trigger: GGGCCCTCCCTCCGGTCTCCAAGCTTCAGTGAACCT...AGCCATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp ACATACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGTGCAGGGGCTGTCTCTaGGGAGTCCCAGAGTTGCCG +
Preference number: 4 (lower is better)
Translates to: TYTHTHMHTHTANTAQGMCRGCL*GVPELP
Trigger: CGGCAACTCTGGGACTCCCCAGAGACAGCCCCTGCA...CATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGTATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp ACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGCTCGCTTGCTGGTATCAGTaGCTCCTTGGGCTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: THTLTCIHTRLILLKAWLACWYQ*LLGLWC
Trigger: GCACCAGAGCCCAAGGAGCCACTGATACCAGCAAGC...GAGCCATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp CTGGGATGTCTTTCCCAGCCTCCACAGACTCTACATTCAGCATGTCCTGGTCTTAGATGGGCTCAGCCTTaGGGCTTGCTGGTATCAGTG +
Preference number: 4 (lower is better)
Translates to: LGCLSQPPQTLHSACPGLRWAQP*GLLVSV
Trigger: CACTGATACCAGCAAGCCCCAAGGCTGAGCCCATCT...AAGACCAGGACATGCTGAATGTAGAGTCTGTGGAGGCTGGGAAAGACATCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR CCA 90 bp CACTCTGTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACCCTCCGTGGGCATCATaGTCAGTAGCTTCTCAATGC +
Preference number: 4 (lower is better)
Translates to: HSVISCTAVQGPDRFPGYPPWAS*SVASQC
Trigger: GCATTGAGAAGCTACTGACCATGATGCCCACGGAGG...GTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGACAGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp ACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGCTCCAGCGAGGCCGCCAATaGAGGCAAGAGTCATCAGGA +
Preference number: 4 (lower is better)
Translates to: THTLTCIHTRLILLKAWLQRGRQ*RQESSG
Trigger: TCCTGATGACTCTTGCCTCCATTGGCGGCCTCGCTG...GAGCCATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp ACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGCTCTGCGCTCACGGTATGTaGCCTGCTTCTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: THTLTCIHTRLILLKAWLCAHGM*PASAAA
Trigger: AGCAGCAGCAGAAGCAGGCCACATACCGTGAGCGCA...GAGCCATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp ACATACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGCTTCTGGGGATGCAGTaGAGGGCCCCACTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: TYTHTHMHTHTANTAQGMLLGMQ*RAPLWA
Trigger: TGCCCACAGTGGGGCCCTCCACTGCATCCCCAGAAG...CATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGTATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR TCA 90 bp ACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGCTCGCAGCTCAGCCCCTCTaGATGCACAAATTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: THTLTCIHTRLILLKAWLAAQPL*MHKFRH
Trigger: GTGCCTGAATTTGTGCATTCAGAGGGGCTGAGCTGC...GAGCCATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR TCA 90 bp CAGCTGTTCCATACCCACTTTCAGGTCAAACAGTGGCTCAGCAATTTCCCGCTCATGGTCAGTAGCTTCTaGGGATGTAGCCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: QLFHTHFQVKQWLSNFPLMVSSF*GCSQSL
Trigger: CAGGCTCTGGCTACATCCTCAGAAGCTACTGACCAT...GAGCGGGAAATTGCTGAGCCACTGTTTGACCTGAAAGTGGGTATGGAACAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567561.1
CDS-3UTR TCA 90 bp AGCTGTTCCATACCCACTTTCAGGTCAAACAGTGGCTCAGCAATTTCCCGCTCCATGGTCAGTAGCTTCTaGGGATGTAGCCAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: SCSIPTFRSNSGSAISRSMVSSF*GCSQSL
Trigger: GAGGCTCTGGCTACATCCTCAGAAGCTACTGACCAT...GGAGCGGGAAATTGCTGAGCCACTGTTTGACCTGAAAGTGGGTATGGAACAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567509.1
CDS-3UTR GCA 90 bp ACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGCTCGCCCTGCTGCTCCAGTaGATCCGTCACATCGTAGAA +
Preference number: 4 (lower is better)
Translates to: THTLTCIHTRLILLKAWLALLLQ*IRHIVE
Trigger: TTCTACGATGTGACGGATGCACTGGAGCAGCAGGGC...GAGCCATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp TACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGCTGCTTCCATGCCCTGCTaGTCCAGTGCATCCGTCACA +
Preference number: 4 (lower is better)
Translates to: YTHTHMHTHTANTAQGMAASMPC*SSASVT
Trigger: TGTGACGGATGCACTGGAGCAGCAGGGCATGGAAGC...AGCCATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp TACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGCTAATAGAGAGCCTGGGTaGACGGGTAGGGAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: YTHTHMHTHTANTAQGMANREPG*TGRELP
Trigger: TGGGAGCTCCCTACCCGTGCACCCAGGCTCTCTATT...AGCCATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp TACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGCTGCTTCCTCAATCTTCTaGCGCTCTTCCTCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: YTHTHMHTHTANTAQGMAASSIF*RSSSVG
Trigger: GCCCACGGAGGAAGAGCGGCAGAAGATTGAGGAAGC...AGCCATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp ACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGCTCAGCGTGTGGCAGAACTaGATGATGCGCACTTCACGG +
Preference number: 4 (lower is better)
Translates to: THTLTCIHTRLILLKAWLSVWQN*MMRTSR
Trigger: CCGTGAAGTGCGCATCATGCAGTTCTGCCACACGCT...GAGCCATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp AGCTGTTCCATACCCACTTTCAGGTCAAACAGTGGCTCAGCAATTTCCCGCTCCTATGTGGCCTGCTTCTaGTGCTGCTGTAGCACTCGT +
Preference number: 4 (lower is better)
Translates to: SCSIPTFRSNSGSAISRSYVACF*CCCSTR
Trigger: ACGAGTGCTACAGCAGCAGCAGAAGCAGGCCACATA...GGAGCGGGAAATTGCTGAGCCACTGTTTGACCTGAAAGTGGGTATGGAACAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567561.1
CDS-3UTR GCA 90 bp TACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGCTGGACCATGCCTCTGCTaGGGCGATTGTGTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: YTHTHMHTHTANTAQGMAGPCLC*GDCVWC
Trigger: ACACCACACACAATCGCCGCAGCAGAGGCATGGTCC...AGCCATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp TACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGCTAGCTGCTCTGGACCATaGCTCTGCTGCGGCGATTGT +
Preference number: 4 (lower is better)
Translates to: YTHTHMHTHTANTAQGMASCSGP*LCCGDC
Trigger: ACAATCGCCGCAGCAGAGGCATGGTCCAGAGCAGCT...AGCCATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGTA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp AAACAGTGGCTCAGCAATTTCCCGCTCCATGCTGTCATAGTCCAGCTTGAAGGCGGATGCAGCGGAAGGTaGCATTCTGTACCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: KQWLSNFPLHAVIVQLEGGCSGR*HSVPAV
Trigger: AACAGCTGGTACAGAATGCCACCTTCCGCTGCATCC...GCCTTCAAGCTGGACTATGACAGCATGGAGCGGGAAATTGCTGAGCCACTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567509.1
ENST00000567561.1
CDS-3UTR CCA 90 bp CACTCTGTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACACTAGGGAGCAGAGATaGTGTAGCAGTGACTGTCGA +
Preference number: 4 (lower is better)
Translates to: HSVISCTAVQGPDRFPGYTREQR*CSSDCR
Trigger: TCGACAGTCACTGCTACACCATCTCTGCTCCCTAGT...GTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGACAGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp ACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGCTCCTGGGCACAGAGTTCTaGGGCCAGAATTCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: THTLTCIHTRLILLKAWLLGTEF*GQNSAL
Trigger: CAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAG...GAGCCATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR TCA 90 bp ACATACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGAAGATCTGCTTCAGTaGGAAGAGGGAGCGGCGGAG +
Preference number: 4 (lower is better)
Translates to: TYTHTHMHTHTANTAQGMEDLLQ*EEGAAE
Trigger: CTCCGCCGCTCCCTCTTCTCACTGAAGCAGATCTTC...CATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGTATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR TCA 90 bp CAGCTGTTCCATACCCACTTTCAGGTCAAACAGTGGCTCAGCAATTTCCCGCTCTGTCATAGTCCAGCTTaGAGGCCCAGAGTTGTAGAC +
Preference number: 4 (lower is better)
Translates to: QLFHTHFQVKQWLSNFPLCHSPA*RPRVVD
Trigger: GTCTACAACTCTGGGCCTTCAAGCTGGACTATGACA...GAGCGGGAAATTGCTGAGCCACTGTTTGACCTGAAAGTGGGTATGGAACAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567509.1
ENST00000567561.1
CDS-3UTR GCA 90 bp ACATACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGAGTCCCGGCCCCAGTaGAGCTTCTACTCAAAGCAC +
Preference number: 4 (lower is better)
Translates to: TYTHTHMHTHTANTAQGMESRPQ*SFYSKH
Trigger: GTGCTTTGAGTAGAAGCTGCACTGGGGCCGGGACTC...CATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGTATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp ACATACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGGCCACAGAGTTCACTaGACGGATGAACAGCGGTGC +
Preference number: 4 (lower is better)
Translates to: TYTHTHMHTHTANTAQGMGHRVH*TDEQRC
Trigger: GCACCGCTGTTCATCCGTGCAGTGAACTCTGTGGCC...CATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGTATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp ACATACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGCTTAGTCCCAGTGCCTaGACCAGGTCATCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: TYTHTHMHTHTANTAQGMLSPSA*TRSSPS
Trigger: GCTCGGAGATGACCTGGTGCAGGCACTGGGACTAAG...CATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGTATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp ACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGCTCACAAAGAGCATCAGCTaGCCGAGCGCTCTAAGGATG +
Preference number: 4 (lower is better)
Translates to: THTLTCIHTRLILLKAWLTKSIS*PSALRM
Trigger: CATCCTTAGAGCGCTCGGCCAGCTGATGCTCTTTGT...GAGCCATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp GATGCAGCGGAAGGTGGCATTCTGTACCAGCTGTTCCATACCCACTTTCAGGTCTTTCAGGTCAAACAGTaGCTCAGCAATTTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: DAAEGGILYQLFHTHFQVFQVKQ*LSNFPL
Trigger: GAGCGGGAAATTGCTGAGCCACTGTTTGACCTGAAA...GACCTGAAAGTGGGTATGGAACAGCTGGTACAGAATGCCACCTTCCGCTGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567509.1
ENST00000567561.1
CDS-3UTR CCA 90 bp ACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGCTCCACGAGGACTGCTCTTaGTCACTGACTGCACCAGAA +
Preference number: 4 (lower is better)
Translates to: THTLTCIHTRLILLKAWLHEDCS*SLTAPE
Trigger: TTCTGGTGCAGTCAGTGACCAAGAGCAGTCCTCGTG...GAGCCATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
3UTR CAA 72 bp GCCACAGAGTTCACTGCACGGATGAACAGCGGTGCGTaGTTTTCGGAGTATTCTACAAACACCAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: ATEFTARMNSGA*FSEYSTNTNSS
Trigger: GCTGCTGTTGGTGTTTGTAGAATACTCCGAAAACAACGCACCGCTGTTCATCCGTGCAGTGAACTCTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR TCA 90 bp GGAAGGTGGCATTCTGTACCAGCTGTTCCATACCCACTTTCAGGTCAAACAGTGTGTCATAGTCCAGCTTaGAGGCCCAGAGTTGTAGAC +
Preference number: 4 (lower is better)
Translates to: GRWHSVPAVPYPLSGQTVCHSPA*RPRVVD
Trigger: GTCTACAACTCTGGGCCTTCAAGCTGGACTATGACA...CACTGTTTGACCTGAAAGTGGGTATGGAACAGCTGGTACAGAATGCCACCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567509.1
ENST00000567561.1
CDS-3UTR TCA 90 bp TACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGCTACTGCTCTTGGTCACTaGCTGCACCAGAAGGTCCAT +
Preference number: 4 (lower is better)
Translates to: YTHTHMHTHTANTAQGMATALGH*LHQKVH
Trigger: ATGGACCTTCTGGTGCAGTCAGTGACCAAGAGCAGT...AGCCATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGTA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp TACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGCTCTGCTTCTCTGTTTCTaGTGCCGCCACATTCTCCAG +
Preference number: 4 (lower is better)
Translates to: YTHTHMHTHTANTAQGMALLLCF*CRHILQ
Trigger: CTGGAGAATGTGGCGGCAGCAGAAACAGAGAAGCAG...AGCCATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp ACATACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGTATCAGTGGCTCCTTaGGCTCTGGTGCAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: TYTHTHMHTHTANTAQGMVSVAP*ALVQGF
Trigger: GAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATAC...CATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGTATGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp TACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGCTAGGGCAGCACCTCTTTaGCACGAGACTCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: YTHTHMHTHTANTAQGMARAAPL*HETQRG
Trigger: ACCTCTTTGAGTCTCGTGCCAAAGAGGTGCTGCCCT...AGCCATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp ACATACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGAATTCCCGCAGCGTGTaGCAGAACTGCATGATGCGC +
Preference number: 4 (lower is better)
Translates to: TYTHTHMHTHTANTAQGMNSRSV*QNCMMR
Trigger: GCGCATCATGCAGTTCTGCCACACGCTGCGGGAATT...CATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGTATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR TCA 90 bp CCAGCTGTTCCATACCCACTTTCAGGTCAAACAGTGGCTCAGCAATTTCCCGCTCAATGCCATCCTTGCTaGCAGCAAACTCATCAAAGT +
Preference number: 4 (lower is better)
Translates to: PAVPYPLSGQTVAQQFPAQCHPC*QQTHQS
Trigger: ACTTTGATGAGTTTGCTGTCAGCAAGGATGGCATTG...AGCGGGAAATTGCTGAGCCACTGTTTGACCTGAAAGTGGGTATGGAACAGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567509.1
CDS-3UTR TCA 90 bp TACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGCTTGTCATAGTCCAGCTTaGAGGCCCAGAGTTGTAGAC +
Preference number: 4 (lower is better)
Translates to: YTHTHMHTHTANTAQGMACHSPA*RPRVVD
Trigger: GTCTACAACTCTGGGCCTTCAAGCTGGACTATGACA...AGCCATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp ACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGCTCACATTCAGCATGTCCTaGTCTTCATCCTCCCCTAGA +
Preference number: 4 (lower is better)
Translates to: THTLTCIHTRLILLKAWLTFSMS*SSSSPR
Trigger: TCTAGGGGAGGATGAAGACCAGGACATGCTGAATGT...GAGCCATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CCA 90 bp ACATACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGCATCTGATGTATCACTaGGTAAACTGGAGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: TYTHTHMHTHTANTAQGMHLMYH*VNWSLG
Trigger: CCCCAGGCTCCAGTTTACCCAGTGATACATCAGATG...CATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGTATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR GCA 90 bp TACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGCTTTTTATTTTGCTCCGTaGGTTCAAGGAGCTCACACA +
Preference number: 4 (lower is better)
Translates to: YTHTHMHTHTANTAQGMAFYFAP*VQGAHT
Trigger: TGTGTGAGCTCCTTGAACGCACGGAGCAAAATAAAA...AGCCATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS CCA 90 bp CCACTGATACCGGCTCTCCGTCCCCGCGGTCTTCCCCGCCCGCCATaGCTCTGCGGCCGGCTCACGCAGCGCGCCTCCGAGTCCCGGCCC +
Preference number: 5 (lower is better)
Translates to: PLIPALRPRGLPRPP*LCGRLTQRASESRP
Trigger: GGGCCGGGACTCGGAGGCGCGCTGCGTGAGCCGGCCGCAGAGCCATGGCGGGCGGGGAAGACCGCGGGGACGGAGAGCCGGTATCAGTGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258201.9
ENST00000561922.1
ENST00000567752.5
CDS GCA 90 bp GCACCGCGGGTATCTGCGCGCCCAAGGGCAGCGCCCCGTCCAGGCTaGAGGTGGGGGCCCGGCGCGGCTCCGGAAAGTTGGCACATGCGA +
Preference number: 5 (lower is better)
Translates to: APRVSARPRAAPRPG*RWGPGAAPESWHMR
Trigger: TCGCATGTGCCAACTTTCCGGAGCCGCGCCGGGCCCCCACCTGCAGCCTGGACGGGGCGCTGCCCTTGGGCGCGCAGATACCCGCGGTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258201.9
ENST00000561922.1
ENST00000567752.5
CDS GCA 90 bp TCCAACTTGAGCGGCGCTCCCAGCAGGCGGTGCACCGCGGGTATCTaGGCGCCCAAGGGCAGCGCCCCGTCCAGGCTGCAGGTGGGGGCC +
Preference number: 5 (lower is better)
Translates to: SNLSGAPSRRCTAGI*APKGSAPSRLQVGA
Trigger: GGCCCCCACCTGCAGCCTGGACGGGGCGCTGCCCTTGGGCGCGCAGATACCCGCGGTGCACCGCCTGCTGGGAGCGCCGCTCAAGTTGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258201.9
ENST00000561922.1
ENST00000567752.5
CDS GCA 90 bp TGCAGAGCACAATCCTCCAACTTGAGCGGCGCTCCCAGCAGGCGGTaGACCGCGGGTATCTGCGCGCCCAAGGGCAGCGCCCCGTCCAGG +
Preference number: 5 (lower is better)
Translates to: CRAQSSNLSGAPSRR*TAGICAPKGSAPSR
Trigger: CCTGGACGGGGCGCTGCCCTTGGGCGCGCAGATACCCGCGGTGCACCGCCTGCTGGGAGCGCCGCTCAAGTTGGAGGATTGTGCTCTGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258201.9
ENST00000561922.1
ENST00000567752.5
CDS GCA 90 bp CAGGCTGCAGGTGGGGGCCCGGCGCGGCTCCGGAAAGTTGGCACATaGGAAGGGGTCGGTGTCTTCCAGGTACTGCACCCTCACGGTCAC +
Preference number: 5 (lower is better)
Translates to: QAAGGGPARLRKVGT*EGVGVFQVLHPHGH
Trigger: GTGACCGTGAGGGTGCAGTACCTGGAAGACACCGACCCCTTCGCATGTGCCAACTTTCCGGAGCCGCGCCGGGCCCCCACCTGCAGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258201.9
ENST00000561922.1
ENST00000567752.5
CDS-3UTR CAA 90 bp AGGGGCTGTCTCTGGGGAGTCCCAGAGTTGCCGGGCATCTGGGTGTCCACCCGCAGGATGGACACCAGATaGGCCCAGGGAGGAGCACCG +
Preference number: 5 (lower is better)
Translates to: RGCLWGVPELPGIWVSTRRMDTR*AQGGAP
Trigger: CGGTGCTCCTCCCTGGGCCAATCTGGTGTCCATCCT...GCGGGTGGACACCCAGATGCCCGGCAACTCTGGGACTCCCCAGAGACAGCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR CAA 90 bp TGCAGGGGCTGTCTCTGGGGAGTCCCAGAGTTGCCGGGCATCTGGGTGTCCACCTGTCCACCCGCCTCATaGGGCATGGCCCCGGCAAGT +
Preference number: 5 (lower is better)
Translates to: CRGCLWGVPELPGIWVSTCPPAS*GMAPAS
Trigger: ACTTGCCGGGGCCATGCCCAATGAGGCGGGTGGACA...GGTGGACACCCAGATGCCCGGCAACTCTGGGACTCCCCAGAGACAGCCCCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS GCA 90 bp AAGCTCCGCAGGCTCTCCTCGGCTGCCCGGCTCCGGCGCTCCAGCTaGCCCAGGTTCTCAGTCAGCTGTTCAAAGTCCACCTTGGCACAG +
Preference number: 5 (lower is better)
Translates to: KLRRLSSAARLRRSS*PRFSVSCSKSTLAQ
Trigger: CTGTGCCAAGGTGGACTTTGAACAGCTGACTGAGAACCTGGGGCAGCTGGAGCGCCGGAGCCGGGCAGCCGAGGAGAGCCTGCGGAGCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258201.9
ENST00000567752.5
CDS-3UTR CAA 90 bp CTGGTATCAGTGGCTCCTTGGGCTCTGGTGCAAGGCTTCGCTGGGCCCGGAGCACGCGGCTCCGGAAAGTaGGCACATGCGAAGGGGTCG +
Preference number: 5 (lower is better)
Translates to: LVSVAPWALVQGFAGPGARGSGK*AHAKGS
Trigger: CGACCCCTTCGCATGTGCCAACTTTCCGGAGCCGCG...TGCTCCGGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR CAA 90 bp CGGCGGTGCACTATCCTTAGCATGGCAACACGGCGGGCACACTGGTCCAGGAAGGGGGCCAGCTCATGCTaGGCCAAGCTCCGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: RRCTILSMATRRAHWSRKGASSC*AKLRRL
Trigger: GAGCCTGCGGAGCTTGGCCAAGCATGAGCTGGCCCC...CTTCCTGGACCAGTGTGCCCGCCGTGTTGCCATGCTAAGGATAGTGCACCGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567561.1
CDS GCA 90 bp TGTCTCTGCCCGGCCCTGGGCCAGCGCAACCTGCTTCTCTGTTTCTaGTGCCGCCACATTCTCCAGGAACCGGGCTCTGAGGGAAGGTGC +
Preference number: 5 (lower is better)
Translates to: CLCPALGQRNLLLCF*CRHILQEPGSEGRC
Trigger: GCACCTTCCCTCAGAGCCCGGTTCCTGGAGAATGTGGCGGCAGCAGAAACAGAGAAGCAGGTTGCGCTGGCCCAGGGCCGGGCAGAGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562266.1
CDS-3UTR CAA 90 bp GGCTTGCTGGTATCAGTGGCTCCTTGGGCTCTGGTGCAAGGCTTCGCTGGGCCCGCACAATCCTCCAACTaGAGCGGCGCTCCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: GLLVSVAPWALVQGFAGPAQSSN*SGAPSR
Trigger: CCTGCTGGGAGCGCCGCTCAAGTTGGAGGATTGTGC...GGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACCAGCAAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR CAA 90 bp AGGTCCCCAATAGAGAGCCTGGGTGCACGGGTAGGGAGCTCCCAGATGGGCTCATGTCCACCCGCCTCATaGGGCATGGCCCCGGCAAGT +
Preference number: 5 (lower is better)
Translates to: RSPIESLGARVGSSQMGSCPPAS*GMAPAS
Trigger: ACTTGCCGGGGCCATGCCCAATGAGGCGGGTGGACA...TGAGCCCATCTGGGAGCTCCCTACCCGTGCACCCAGGCTCTCTATTGGGGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR CAA 90 bp TGCAGGGGCTGTCTCTGGGGAGTCCCAGAGTTGCCGGGCATCTGGGTGTCCACCGCTCAGCCTTGGGGCTaGCTGGTATCAGTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: CRGCLWGVPELPGIWVSTAQPWG*LVSVAP
Trigger: AGGAGCCACTGATACCAGCAAGCCCCAAGGCTGAGC...GGTGGACACCCAGATGCCCGGCAACTCTGGGACTCCCCAGAGACAGCCCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR CAA 90 bp AGGCATGGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCAGGGCCCAAAGCGGCTaGCAGAGACTCCATGGCCCC +
Preference number: 5 (lower is better)
Translates to: RHGSWAQSSGARILLWALRAQSG*QRLHGP
Trigger: GGGGCCATGGAGTCTCTGCAAGCCGCTTTGGGCCCT...GAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCCATGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS GCA 90 bp TCCGGAAAGTTGGCACATGCGAAGGGGTCGGTGTCTTCCAGGTACTaGACCCTCACGGTCACCACTGATACCGGCTCTCCGTCCCCGCGG +
Preference number: 5 (lower is better)
Translates to: SGKLAHAKGSVSSRY*TLTVTTDTGSPSPR
Trigger: CCGCGGGGACGGAGAGCCGGTATCAGTGGTGACCGTGAGGGTGCAGTACCTGGAAGACACCGACCCCTTCGCATGTGCCAACTTTCCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258201.9
ENST00000561922.1
ENST00000567752.5
CDS-3UTR CAA 90 bp TGGTATCAGTGGCTCCTTGGGCTCTGGTGCAAGGCTTCGCTGGGCCCGGAGCAGGCCGCCAGCGTCTTGTaGATGAGGGTGACCGTGTAC +
Preference number: 5 (lower is better)
Translates to: WYQWLLGLWCKASLGPEQAASVL*MRVTVY
Trigger: GTACACGGTCACCCTCATCAACAAGACGCTGGCGGC...CTGCTCCGGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR CAA 90 bp AGGTCCCCAATAGAGAGCCTGGGTGCACGGGTAGGGAGCTCCCAGATGGGCTCAGAACGGCGGCTCCTCTaGCCCTCCTCAGAAGAAGGC +
Preference number: 5 (lower is better)
Translates to: RSPIESLGARVGSSQMGSERRLL*PSSEEG
Trigger: GCCTTCTTCTGAGGAGGGCAAGAGGAGCCGCCGTTC...TGAGCCCATCTGGGAGCTCCCTACCCGTGCACCCAGGCTCTCTATTGGGGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR CAA 90 bp CCAGAGAACGGCGGCTCCTCTTGCCCTCCTCAGAAGAAGGCTTTCGTCGTTCCCAGGGCCCAAAGCGGCTaGCAGAGACTCCATGGCCCC +
Preference number: 5 (lower is better)
Translates to: PENGGSSCPPQKKAFVVPRAQSG*QRLHGP
Trigger: GGGGCCATGGAGTCTCTGCAAGCCGCTTTGGGCCCT...GGGAACGACGAAAGCCTTCTTCTGAGGAGGGCAAGAGGAGCCGCCGTTCTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS GCA 90 bp TGTCTCTGCCCGGCCCTGGGCCAGCGCAACCTGCTTCTCTGTTTCTaGTGCCGCCACATTCTCCAGGAACCGGGCTCAAACGGAAGCAGT +
Preference number: 5 (lower is better)
Translates to: CLCPALGQRNLLLCF*CRHILQEPGSNGSS
Trigger: ACTGCTTCCGTTTGAGCCCGGTTCCTGGAGAATGTGGCGGCAGCAGAAACAGAGAAGCAGGTTGCGCTGGCCCAGGGCCGGGCAGAGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568595.1
CDS-3UTR CAA 90 bp ATGGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCAGCACAATCCTCCAACTaGAGCGGCGCTCCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: MAPGHRVLGPEFCSGPSSAQSSN*SGAPSR
Trigger: CCTGCTGGGAGCGCCGCTCAAGTTGGAGGATTGTGC...TGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CAA 90 bp ATGGGCTCAGCCTTGGGGCTTGCTGGTATCAGTGGCTCCTTGGGCTCTGGTGCAAGCGCCGCCAGCGTCTaGTTGATGAGGGTGACCGTG +
Preference number: 5 (lower is better)
Translates to: MGSALGLAGISGSLGSGASAASV*LMRVTV
Trigger: CACGGTCACCCTCATCAACAAGACGCTGGCGGCGCT...TGCACCAGAGCCCAAGGAGCCACTGATACCAGCAAGCCCCAAGGCTGAGCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR CAA 90 bp GTATCAGTGGCTCCTTGGGCTCTGGTGCAAGGCTTCGCTGGGCCCGGAGCAGGACAGATGGGCTCAGCCTaGGGGCTTGCTGGTATCAGT +
Preference number: 5 (lower is better)
Translates to: VSVAPWALVQGFAGPGAGQMGSA*GLAGIS
Trigger: ACTGATACCAGCAAGCCCCAAGGCTGAGCCCATCTG...TCCTGCTCCGGGCCCAGCGAAGCCTTGCACCAGAGCCCAAGGAGCCACTGATAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR CAA 90 bp CCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTCTGTATGGCGTTGCTGCGCTaGGGGTCCAGCACTGTGGTC +
Preference number: 5 (lower is better)
Translates to: PGHRVLGPEFCSGPSSLCMALLR*GSSTVV
Trigger: GACCACAGTGCTGGACCCCAAGCGCAGCAACGCCAT...ACAGAGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CAA 90 bp TCCAGCTTGAAGGCCCAGAGTTGTAGACGAGCAGCGAGGCCGCCAATGGAGGCAATGGCGTTGCTGCGCTaGGGGTCCAGCACTGTGGTC +
Preference number: 5 (lower is better)
Translates to: SSLKAQSCRRAARPPMEAMALLR*GSSTVV
Trigger: GACCACAGTGCTGGACCCCAAGCGCAGCAACGCCAT...TGCCTCCATTGGCGGCCTCGCTGCTCGTCTACAACTCTGGGCCTTCAAGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567509.1
CDS-3UTR CAA 90 bp CGGCGGTGCACTATCCTTAGCATGGCAACACGGCGGGCACACTGGTCCAGGAAGTCCACCTGGGAGCCATaGAGGAAGTTGCCCACCGCT +
Preference number: 5 (lower is better)
Translates to: RRCTILSMATRRAHWSRKSTWEP*RKLPTA
Trigger: AGCGGTGGGCAACTTCCTCAATGGCTCCCAGGTGGA...CTTCCTGGACCAGTGTGCCCGCCGTGTTGCCATGCTAAGGATAGTGCACCGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567561.1
CDS GCA 90 bp CGTCCCCGGGTCTTGTTGCGCTCACGGTATGTGGCCTGCTTCTGCTaGTGCTGTAGCACTCGTTCCCGGCAAGTCCGATACTCAAGCGCA +
Preference number: 5 (lower is better)
Translates to: RPRVLLRSRYVACFC*CCSTRSRQVRYSSA
Trigger: TGCGCTTGAGTATCGGACTTGCCGGGAACGAGTGCTACAGCAGCAGCAGAAGCAGGCCACATACCGTGAGCGCAACAAGACCCGGGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258201.9
ENST00000566006.1
ENST00000567752.5
CDS GCA 90 bp GAGGCCCCAGTGTCTGGGGACTGCCCTGCAGAAATGCCAAGCCCATaGCCACCACCAGAGGGACAGGAAATGCCCACCTACCAAAGGAGA +
Preference number: 5 (lower is better)
Translates to: EAPVSGDCPAEMPSP*PPPEGQEMPTYQRR
Trigger: TCTCCTTTGGTAGGTGGGCATTTCCTGTCCCTCTGGTGGTGGGCATGGGCTTGGCATTTCTGCAGGGCAGTCCCCAGACACTGGGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569888.1
CDS CCA 90 bp AGCCCACTCTTCAACGTCCTTCTCACTGCAGGGACAGAGCAGGGTTaGAGGGGGTTGATGGGGTTCAGGTGGGCAGTGGGATTGTGGGGG +
Preference number: 5 (lower is better)
Translates to: SPLFNVLLTAGTEQG*RGLMGFRWAVGLWG
Trigger: CCCCCACAATCCCACTGCCCACCTGAACCCCATCAACCCCCTCCAACCCTGCTCTGTCCCTGCAGTGAGAAGGACGTTGAAGAGTGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569085.1
CDS-3UTR CAA 90 bp AGGTCCCCAATAGAGAGCCTGGGTGCACGGGTAGGGAGCTCCCAGATGGGCTCAGGTATCAGTGGCTCCTaGGGCTCTGGTGCAAGGCTT +
Preference number: 5 (lower is better)
Translates to: RSPIESLGARVGSSQMGSGISGS*GSGARL
Trigger: AAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACC...TGAGCCCATCTGGGAGCTCCCTACCCGTGCACCCAGGCTCTCTATTGGGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR CAA 90 bp ATGGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCAGCTCAGCCTTGGGGCTaGCTGGTATCAGTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: MAPGHRVLGPEFCSGPSSAQPWG*LVSVAP
Trigger: AGGAGCCACTGATACCAGCAAGCCCCAAGGCTGAGC...TGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CAA 90 bp AGGTCCCCAATAGAGAGCCTGGGTGCACGGGTAGGGAGCTCCCAGATGGGCTCACAGATGGGCTCAGCCTaGGGGCTTGCTGGTATCAGT +
Preference number: 5 (lower is better)
Translates to: RSPIESLGARVGSSQMGSQMGSA*GLAGIS
Trigger: ACTGATACCAGCAAGCCCCAAGGCTGAGCCCATCTG...TGAGCCCATCTGGGAGCTCCCTACCCGTGCACCCAGGCTCTCTATTGGGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR CAA 90 bp GGCCGCCAATGGAGGCAAGAGTCATCAGGAAGTTCTCGGCTGGGCCCAGGGGTAGAGGGCAGCACCTCTTaGGCACGAGACTCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: GRQWRQESSGSSRLGPGVEGSTS*ARDSKR
Trigger: CCTCTTTGAGTCTCGTGCCAAAGAGGTGCTGCCCTC...TACCCCTGGGCCCAGCCGAGAACTTCCTGATGACTCTTGCCTCCATTGGCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567509.1
CDS-3UTR CAA 90 bp GCCAATGGAGGCAAGAGTCATCAGGAAGTTCTCGGCTGGGCCCAGGGGTATGTCCCGATGTTGATGGCGTaGCTGCGCTTGGGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: ANGGKSHQEVLGWAQGYVPMLMA*LRLGSS
Trigger: GCTGGACCCCAAGCGCAGCAACGCCATCAACATCGG...GACATACCCCTGGGCCCAGCCGAGAACTTCCTGATGACTCTTGCCTCCATTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567509.1
CDS-3UTR CAA 90 bp AGGCATGGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCGTGGTTAGGCCGATGTaGATGGCGTTGCTGCGCTTG +
Preference number: 5 (lower is better)
Translates to: RHGSWAQSSGARILLWALVVRPM*MALLRL
Trigger: CAAGCGCAGCAACGCCATCAACATCGGCCTAACCAC...GAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCCATGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CAA 90 bp TCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTCTGTTGCCGCGGGAACGCTaGCGTTCCCTAGCAGCTAAG +
Preference number: 5 (lower is better)
Translates to: SWAQSSGARILLWALLTLLPRER*RSLAAK
Trigger: CTTAGCTGCTAGGGAACGCAAGCGTTCCCGCGGCAA...CAGAGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS TCA 90 bp GTGGTGTCCTCAGGCCTGCTGGTCAGCAGACTCTTCATACTAGCATaGCTGTCAGCATCTCCCCGGCCTGGCCCGCTGCTCACTGCTACT +
Preference number: 5 (lower is better)
Translates to: VVSSGLLVSRLFILA*LSASPRPGPLLTAT
Trigger: AGTAGCAGTGAGCAGCGGGCCAGGCCGGGGAGATGCTGACAGTCATGCTAGTATGAAGAGTCTGCTGACCAGCAGGCCTGAGGACACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258201.9
ENST00000567752.5
ENST00000569085.1
CDS TCA 90 bp GCCACATTCTCCAGGAACCGGGCTCTGAGGGAAGGTGCTTGTCACTaGCAGCGTCTGACACACCCCAGCCCAGGTGTACATGCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: ATFSRNRALREGACH*QRLTHPSPGVHALL
Trigger: CAGCAAGGCATGTACACCTGGGCTGGGGTGTGTCAGACGCTGTCAGTGACAAGCACCTTCCCTCAGAGCCCGGTTCCTGGAGAATGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562266.1
CDS TCA 90 bp CCGTGGGCATCATGGTCAGTAGCTTCTGAGGATGTAGCCAGAGCCTaGCATGGCCCCCTCAATGCAGGCCTGAGGCCTGAGGCATTGGTC +
Preference number: 5 (lower is better)
Translates to: PWASWSVASEDVARA*HGPLNAGLRPEALV
Trigger: GACCAATGCCTCAGGCCTCAGGCCTGCATTGAGGGGGCCATGTCAGGCTCTGGCTACATCCTCAGAAGCTACTGACCATGATGCCCACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567561.1
ENST00000569888.1
CDS GCA 90 bp ATGCGTCCCCGGGTCTTGTTGCGCTCACGGTATGTGGCCTGCTTCTaGTGCTGCTGTAGCACTCGTTCCCGGCAAGTCCGATACTCAAGC +
Preference number: 5 (lower is better)
Translates to: MRPRVLLRSRYVACF*CCCSTRSRQVRYSS
Trigger: GCTTGAGTATCGGACTTGCCGGGAACGAGTGCTACAGCAGCAGCAGAAGCAGGCCACATACCGTGAGCGCAACAAGACCCGGGGACGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258201.9
ENST00000566006.1
ENST00000567752.5
CDS GCA 90 bp TTCTGCTGCCGCCACATTCTCCAGGAACCGGGCTCTGAGGGAAGGTaGTTGTCACTGACAGCGTCTGACACACCCCAGCCCAGGTGTACA +
Preference number: 5 (lower is better)
Translates to: FCCRHILQEPGSEGR*LSLTASDTPQPRCT
Trigger: TGTACACCTGGGCTGGGGTGTGTCAGACGCTGTCAGTGACAAGCACCTTCCCTCAGAGCCCGGTTCCTGGAGAATGTGGCGGCAGCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562266.1
CDS GCA 90 bp CTGCACCAGGTCATCTCCGAGCCCACTCTTCAACGTCCTTCTCACTaGAGGGACAGAGCAGGGTTGGAGGGGGTTGATGGGGTTCAGGTG +
Preference number: 5 (lower is better)
Translates to: LHQVISEPTLQRPSH*RDRAGLEGVDGVQV
Trigger: CACCTGAACCCCATCAACCCCCTCCAACCCTGCTCTGTCCCTGCAGTGAGAAGGACGTTGAAGAGTGGGCTCGGAGATGACCTGGTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569085.1
CDS CCA 90 bp AGGTCAGAGGACTCAGGCCGGGTCTGGAGCACTAGGGAGCAGAGATaGTGTAGCAGTGACTGTCGACGCACCGTGTCCTTCACCTCTGAC +
Preference number: 5 (lower is better)
Translates to: RSEDSGRVWSTREQR*CSSDCRRTVSFTSD
Trigger: GTCAGAGGTGAAGGACACGGTGCGTCGACAGTCACTGCTACACCATCTCTGCTCCCTAGTGCTCCAGACCCGGCCTGAGTCCTCTGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258201.9
ENST00000567752.5
CDS-3UTR CAA 90 bp TCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTCTGGGTATCAGTGGCTCCTaGGGCTCTGGTGCAAGGCTT +
Preference number: 5 (lower is better)
Translates to: SWAQSSGARILLWALLTLGISGS*GSGARL
Trigger: AAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACC...CAGAGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CAA 90 bp AGATGGGCTCAGCCTTGGGGCTTGCTGGTATCAGTGGCTCCTTGGGCTCTGGTGGGTATCAGTGGCTCCTaGGGCTCTGGTGCAAGGCTT +
Preference number: 5 (lower is better)
Translates to: RWAQPWGLLVSVAPWALVGISGS*GSGARL
Trigger: AAGCCTTGCACCAGAGCCCAAGGAGCCACTGATACC...CACCAGAGCCCAAGGAGCCACTGATACCAGCAAGCCCCAAGGCTGAGCCCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR CAA 90 bp TCTGAAAAGTCCAGGTCCCCAATAGAGAGCCTGGGTGCACGGGTAGGGAGCTCCGCTCAGCCTTGGGGCTaGCTGGTATCAGTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: SEKSRSPIESLGARVGSSAQPWG*LVSVAP
Trigger: AGGAGCCACTGATACCAGCAAGCCCCAAGGCTGAGC...GGAGCTCCCTACCCGTGCACCCAGGCTCTCTATTGGGGACCTGGACTTTTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000568595.1
CDS-3UTR CAA 90 bp ATGGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACCCTCTCCAGCTTTCTaGGAGGGCAGCACCTCTTTG +
Preference number: 5 (lower is better)
Translates to: MAPGHRVLGPEFCSGPSSPSPAF*EGSTSL
Trigger: CAAAGAGGTGCTGCCCTCCAAGAAAGCTGGAGAGGG...TGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CAA 90 bp AGGCAAGAGTCATCAGGAAGTTCTCGGCTGGGCCCAGGGGTATGTCAGGGTTGGAGGGGTATGTCAGGGTaGGCCAGCTGGGCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: RQESSGSSRLGPGVCQGWRGMSG*ASWASS
Trigger: TGAGGAAGCCCAGCTGGCCAACCCTGACATACCCCT...CCAACCCTGACATACCCCTGGGCCCAGCCGAGAACTTCCTGATGACTCTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567509.1
ENST00000567561.1
CDS-3UTR CAA 90 bp ATGGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCAGCACGAGGACTGCTCTaGGTCACTGACTGCACCAGA +
Preference number: 5 (lower is better)
Translates to: MAPGHRVLGPEFCSGPSSARGLL*VTDCTR
Trigger: TCTGGTGCAGTCAGTGACCAAGAGCAGTCCTCGTGC...TGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS TCA 90 bp GTGGTCGGCAGCAGCACCCACACGGATCAGGCAGCTCAGCCCCTCTaGATGCACAAATTCAGGCACCAGGTCTTTGTCCTCCTAGAGGCA +
Preference number: 5 (lower is better)
Translates to: VVGSSTHTDQAAQPL*MHKFRHQVFVLLEA
Trigger: TGCCTCTAGGAGGACAAAGACCTGGTGCCTGAATTTGTGCATTCAGAGGGGCTGAGCTGCCTGATCCGTGTGGGTGCTGCTGCCGACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567752.5
CDS GCA 90 bp AGATTTCCGGGATACAGCACCTTCACACCTCCAGGCCAGGACCCTTaGTTAGTCCCAGTGCCTGCACCAGGTCATCTCCGAGCCCACTCT +
Preference number: 5 (lower is better)
Translates to: RFPGYSTFTPPGQDP*LVPVPAPGHLRAHS
Trigger: AGAGTGGGCTCGGAGATGACCTGGTGCAGGCACTGGGACTAAGCAAGGGTCCTGGCCTGGAGGTGTGAAGGTGCTGTATCCCGGAAATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258201.9
ENST00000567752.5
ENST00000569085.1
CDS GCA 90 bp CACCTTCACACCTCCAGGCCAGGACCCTTGCTTAGTCCCAGTGCCTaGACCAGGTCATCTCCGAGCCCACTCTTCAACGTCCTTCTCACT +
Preference number: 5 (lower is better)
Translates to: HLHTSRPGPLLSPSA*TRSSPSPLFNVLLT
Trigger: AGTGAGAAGGACGTTGAAGAGTGGGCTCGGAGATGACCTGGTGCAGGCACTGGGACTAAGCAAGGGTCCTGGCCTGGAGGTGTGAAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569085.1
CDS-3UTR CAA 90 bp ATGGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCATCCGGAGGGAGACACTaGCAGAGCACAATCCTCCAA +
Preference number: 5 (lower is better)
Translates to: MAPGHRVLGPEFCSGPSSSGGRH*QSTILQ
Trigger: TTGGAGGATTGTGCTCTGCAAGTGTCTCCCTCCGGA...TGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CAA 90 bp GCCAATGGAGGCAAGAGTCATCAGGAAGTTCTCGGCTGGGCCCAGGGGTATGTCCCCTCTCCAGCTTTCTaGGAGGGCAGCACCTCTTTG +
Preference number: 5 (lower is better)
Translates to: ANGGKSHQEVLGWAQGYVPSPAF*EGSTSL
Trigger: CAAAGAGGTGCTGCCCTCCAAGAAAGCTGGAGAGGG...GACATACCCCTGGGCCCAGCCGAGAACTTCCTGATGACTCTTGCCTCCATTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567509.1
CDS-3UTR CAA 90 bp CACTCTGTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACCCAGCACTGTGGTCATaGTCCGGCGGCCCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: HSVISCTAVQGPDRFPGYPALWS*SGGPLQ
Trigger: CTGGAGAGGGCCGCCGGACAATGACCACAGTGCTGG...GTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGACAGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CAA 90 bp ATGGGCTCAGCCTTGGGGCTTGCTGGTATCAGTGGCTCCTTGGGCTCTGGTGCAAACCCCAAGATAGCGTaGACCCTCACAGAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: MGSALGLAGISGSLGSGANPKIA*TLTESW
Trigger: CCAGCTCTCTGTGAGGGTCAACGCTATCTTGGGGTT...TGCACCAGAGCCCAAGGAGCCACTGATACCAGCAAGCCCCAAGGCTGAGCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR CAA 90 bp GTAGACGAGCAGCGAGGCCGCCAATGGAGGCAAGAGTCATCAGGAAGTTCTCGGCTGAGGCCTGAGGCATaGGTCTTGACCCCTCAGTCA +
Preference number: 5 (lower is better)
Translates to: VDEQRGRQWRQESSGSSRLRPEA*VLTPQS
Trigger: TGACTGAGGGGTCAAGACCAATGCCTCAGGCCTCAG...CCGAGAACTTCCTGATGACTCTTGCCTCCATTGGCGGCCTCGCTGCTCGTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567561.1
CDS TCA 90 bp GTGGTCGGCAGCAGCACCCACACGGATCAGGCAGCTCAGCCCCTCTaGATGCACAAATTCAGGCACCAGGTCTTTGTCCTCCTGGAAGAT +
Preference number: 5 (lower is better)
Translates to: VVGSSTHTDQAAQPL*MHKFRHQVFVLLED
Trigger: ATCTTCCAGGAGGACAAAGACCTGGTGCCTGAATTTGTGCATTCAGAGGGGCTGAGCTGCCTGATCCGTGTGGGTGCTGCTGCCGACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS TCA 90 bp ATCTTCTGCCGCTCTTCCTCCGTGGGCATCATGGTCAGTAGCTTCTaGGGATGTAGCCAGAGCCTGACATGGCCCCCTCAATGCAGGCCT +
Preference number: 5 (lower is better)
Translates to: IFCRSSSVGIMVSSF*GCSQSLTWPPQCRP
Trigger: AGGCCTGCATTGAGGGGGCCATGTCAGGCTCTGGCTACATCCTCAGAAGCTACTGACCATGATGCCCACGGAGGAAGAGCGGCAGAAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567561.1
CDS GCA 90 bp TCGGCAGCAGCACCCACACGGATCAGGCAGCTCAGCCCCTCTGAATaGACAAATTCAGGCACCAGGTCTTTGTCCTCCTGGAAGATCTGC +
Preference number: 5 (lower is better)
Translates to: SAAAPTRIRQLSPSE*TNSGTRSLSSWKIC
Trigger: GCAGATCTTCCAGGAGGACAAAGACCTGGTGCCTGAATTTGTGCATTCAGAGGGGCTGAGCTGCCTGATCCGTGTGGGTGCTGCTGCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS GCA 90 bp CACCTTCACACCTCCAGGCCAGGACCCTTGCTTAGTCCCAGTGCCTaGACCAGGTCATCTCCGAGCCCACTCTTCAACGTCCTTCTCAAA +
Preference number: 5 (lower is better)
Translates to: HLHTSRPGPLLSPSA*TRSSPSPLFNVLLK
Trigger: TTTGAGAAGGACGTTGAAGAGTGGGCTCGGAGATGACCTGGTGCAGGCACTGGGACTAAGCAAGGGTCCTGGCCTGGAGGTGTGAAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258201.9
ENST00000567752.5
CDS CCA 90 bp GCTCTCACACACTCACCCAAGATAGCGTTGACCCTCACAGAGAGCTaGGTCCGAAGGATCAGCGTGGGCTTCCGCCCTTTGCTGATCTCT +
Preference number: 5 (lower is better)
Translates to: ALTHSPKIALTLTES*VRRISVGFRPLLIS
Trigger: AGAGATCAGCAAAGGGCGGAAGCCCACGCTGATCCTTCGGACCCAGCTCTCTGTGAGGGTCAACGCTATCTTGGGTGAGTGTGTGAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567752.5
CDS-3UTR CAA 90 bp CACTCTGTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACAGCGCCGCCAGCGTCTaGTTGATGAGGGTGACCGTG +
Preference number: 5 (lower is better)
Translates to: HSVISCTAVQGPDRFPGYSAASV*LMRVTV
Trigger: CACGGTCACCCTCATCAACAAGACGCTGGCGGCGCT...GTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGACAGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CAA 90 bp GTTCCATACCCACTTTCAGGTCAAACAGTGGCTCAGCAATTTCCCGCTCCATGCCCAGCACTGTGGTCATaGTCCGGCGGCCCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: VPYPLSGQTVAQQFPAPCPALWS*SGGPLQ
Trigger: CTGGAGAGGGCCGCCGGACAATGACCACAGTGCTGG...GCATGGAGCGGGAAATTGCTGAGCCACTGTTTGACCTGAAAGTGGGTATGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567509.1
CDS-3UTR CAA 90 bp CAGAGTTGTAGACGAGCAGCGAGGCCGCCAATGGAGGCAAGAGTCATCAGGAAGGAGCCATTGAGGAAGTaGCCCACCGCTAGGAGGGTA +
Preference number: 5 (lower is better)
Translates to: QSCRRAARPPMEARVIRKEPLRK*PTARRV
Trigger: TACCCTCCTAGCGGTGGGCAACTTCCTCAATGGCTC...CTTCCTGATGACTCTTGCCTCCATTGGCGGCCTCGCTGCTCGTCTACAACTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567561.1
CDS-3UTR CAA 90 bp CCCAGAGTTGTAGACGAGCAGCGAGGCCGCCAATGGAGGCAAGAGTCATCAGGAAAGGCATGGAACCTATaGCAGACACGGCGGTGCACT +
Preference number: 5 (lower is better)
Translates to: PRVVDEQRGRQWRQESSGKAWNL*QTRRCT
Trigger: AGTGCACCGCCGTGTCTGCAATAGGTTCCATGCCTT...TCCTGATGACTCTTGCCTCCATTGGCGGCCTCGCTGCTCGTCTACAACTCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567561.1
CDS-3UTR CAA 90 bp GTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACAGCACCATGCGTCCCCGGGTCTaGTTGCGCTCACGGTATGTG +
Preference number: 5 (lower is better)
Translates to: VISCTAVQGPDRFPGYSTMRPRV*LRSRYV
Trigger: CACATACCGTGAGCGCAACAAGACCCGGGGACGCAT...GGTGCTGTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CAA 90 bp CACTCTGTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACCCTCTGCTGCGGCGATaGTGTGTGGTGTCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: HSVISCTAVQGPDRFPGYPLLRR*CVVSSG
Trigger: GCCTGAGGACACCACACACAATCGCCGCAGCAGAGG...GTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGACAGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS CCA 90 bp CACCCTGTAGACAAGACATGGCCCGAGGCTGCTTCTGGGCCAGAGTaGCCAGCTTGGGCCCTAAGGACACAGACATCCAAATCTCATAGA +
Preference number: 5 (lower is better)
Translates to: HPVDKTWPEAASGPE*PAWALRTQTSKSHR
Trigger: TCTATGAGATTTGGATGTCTGTGTCCTTAGGGCCCAAGCTGGCCACTCTGGCCCAGAAGCAGCCTCGGGCCATGTCTTGTCTACAGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566006.1
CDS CCA 90 bp GCTGGGCTTCCTCAATCTTCTGCCGCTCTTCCTCCGTGGGCATCATaGTCAGTAGCTTCTGAGGATGTAGCCAGAGCCTCAATGCCATCC +
Preference number: 5 (lower is better)
Translates to: AGLPQSSAALPPWAS*SVASEDVARASMPS
Trigger: GGATGGCATTGAGGCTCTGGCTACATCCTCAGAAGCTACTGACCATGATGCCCACGGAGGAAGAGCGGCAGAAGATTGAGGAAGCCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567509.1
CDS-3UTR CAA 90 bp GTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACAGCACCCAGATGGGCTCAGCCTaGGGGCTTGCTGGTATCAGT +
Preference number: 5 (lower is better)
Translates to: VISCTAVQGPDRFPGYSTQMGSA*GLAGIS
Trigger: ACTGATACCAGCAAGCCCCAAGGCTGAGCCCATCTG...GGTGCTGTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CAA 90 bp TACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGCTGGGGCCAGCTCATGCTaGGCCAAGCTCCGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: YTHTHMHTHTANTAQGMAGASSC*AKLRRL
Trigger: GAGCCTGCGGAGCTTGGCCAAGCATGAGCTGGCCCC...AGCCATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CAA 90 bp CTGTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACAGCACTCAAAGACTTGCGGTaGCCGCGGGAACGCTTGCGT +
Preference number: 5 (lower is better)
Translates to: LSSPALQSRVQIDFRDTALKDLR*PRERLR
Trigger: ACGCAAGCGTTCCCGCGGCAACCGCAAGTCTTTGAG...TGCTGTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CAA 90 bp CTGTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACAGCAGTCCTTCTCAAAGACTaGCGGTTGCCGCGGGAACGC +
Preference number: 5 (lower is better)
Translates to: LSSPALQSRVQIDFRDTAVLLKD*RLPRER
Trigger: GCGTTCCCGCGGCAACCGCAAGTCTTTGAGAAGGAC...TGCTGTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS CCA 90 bp ATGCACAAATTCAGGCACCAGGTCTTTGTCCTCCTAGAGGCACCATaGGGGAGTTTAGGGAAGCTTGGGCTACACACTTACCCCCAGCCC +
Preference number: 5 (lower is better)
Translates to: MHKFRHQVFVLLEAP*GSLGKLGLHTYPQP
Trigger: GGGCTGGGGGTAAGTGTGTAGCCCAAGCTTCCCTAAACTCCCCCATGGTGCCTCTAGGAGGACAAAGACCTGGTGCCTGAATTTGTGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567752.5
CDS CCA 90 bp GACAAGACATGGCCCGAGGCTGCTTCTGGGCCAGAGTGGCCAGCTTaGGCCCTAAGGACACAGACATCCAAATCTCATAGACTAGTGCAA +
Preference number: 5 (lower is better)
Translates to: DKTWPEAASGPEWPA*ALRTQTSKSHRLVQ
Trigger: TTGCACTAGTCTATGAGATTTGGATGTCTGTGTCCTTAGGGCCCAAGCTGGCCACTCTGGCCCAGAAGCAGCCTCGGGCCATGTCTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566006.1
CDS-3UTR CAA 90 bp ACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGCTCGAACGGCGGCTCCTCTaGCCCTCCTCAGAAGAAGGC +
Preference number: 5 (lower is better)
Translates to: THTLTCIHTRLILLKAWLERRLL*PSSEEG
Trigger: GCCTTCTTCTGAGGAGGGCAAGAGGAGCCGCCGTTC...GAGCCATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CAA 90 bp TACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGCTTGTCCACCCGCCTCATaGGGCATGGCCCCGGCAAGT +
Preference number: 5 (lower is better)
Translates to: YTHTHMHTHTANTAQGMACPPAS*GMAPAS
Trigger: ACTTGCCGGGGCCATGCCCAATGAGGCGGGTGGACA...AGCCATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CAA 90 bp CTGTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACAGCAGAGGGCAGCACCTCTTaGGCACGAGACTCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: LSSPALQSRVQIDFRDTAEGSTS*ARDSKR
Trigger: CCTCTTTGAGTCTCGTGCCAAAGAGGTGCTGCCCTC...TGCTGTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CAA 90 bp CAGGATGCAGCGGAAGGTGGCATTCTGTACCAGCTGTTCCATACCCACTTTCAGGTGGTTAGGCCGATGTaGATGGCGTTGCTGCGCTTG +
Preference number: 5 (lower is better)
Translates to: QDAAEGGILYQLFHTHFQVVRPM*MALLRL
Trigger: CAAGCGCAGCAACGCCATCAACATCGGCCTAACCAC...CTGAAAGTGGGTATGGAACAGCTGGTACAGAATGCCACCTTCCGCTGCATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567509.1
CDS-3UTR CAA 90 bp GGCTCCTGGGCACAGAGTTCTGGGGCCAGAATTCTGCTCTGGGCCCTCCTCACTTTCTCAATGCCATCCTaGCTGACAGCAAACTCATCA +
Preference number: 5 (lower is better)
Translates to: GSWAQSSGARILLWALLTFSMPS*LTANSS
Trigger: TGATGAGTTTGCTGTCAGCAAGGATGGCATTGAGAA...AGTGAGGAGGGCCCAGAGCAGAATTCTGGCCCCAGAACTCTGTGCCCAGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CAA 90 bp CCAGCTGTTCCATACCCACTTTCAGGTCAAACAGTGGCTCAGCAATTTCCCGCTAGGGGTATGTCAGGGTaGGCCAGCTGGGCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: PAVPYPLSGQTVAQQFPARGMSG*ASWASS
Trigger: TGAGGAAGCCCAGCTGGCCAACCCTGACATACCCCT...AGCGGGAAATTGCTGAGCCACTGTTTGACCTGAAAGTGGGTATGGAACAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567509.1
ENST00000567561.1
CDS-3UTR CAA 90 bp CACTCTGTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACGAGCCATTGAGGAAGTaGCCCACCGCTAGGAGGGTA +
Preference number: 5 (lower is better)
Translates to: HSVISCTAVQGPDRFPGYEPLRK*PTARRV
Trigger: TACCCTCCTAGCGGTGGGCAACTTCCTCAATGGCTC...GTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGACAGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CAA 90 bp CTGTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACAGCATGTTCAAAGTCCACCTaGGCACAGCGGGTCAGGGCA +
Preference number: 5 (lower is better)
Translates to: LSSPALQSRVQIDFRDTACSKST*AQRVRA
Trigger: TGCCCTGACCCGCTGTGCCAAGGTGGACTTTGAACA...TGCTGTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CAA 90 bp AGGCCCAGAGTTGTAGACGAGCAGCGAGGCCGCCAATGGAGGCAAGAGTCATCAGCCTCAATGCCATCCTaGCTGACAGCAAACTCATCA +
Preference number: 5 (lower is better)
Translates to: RPRVVDEQRGRQWRQESSASMPS*LTANSS
Trigger: TGATGAGTTTGCTGTCAGCAAGGATGGCATTGAGGC...TGATGACTCTTGCCTCCATTGGCGGCCTCGCTGCTCGTCTACAACTCTGGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567509.1
CDS CCA 90 bp GAGCTATACAGCTTTTCCAAGATAGCGTTGACCCTCACAGAGAGCTaGGTCCGAAGGATCAGCGTGGGCTTCCGCCCTTTGCTGATCTCT +
Preference number: 5 (lower is better)
Translates to: ELYSFSKIALTLTES*VRRISVGFRPLLIS
Trigger: AGAGATCAGCAAAGGGCGGAAGCCCACGCTGATCCTTCGGACCCAGCTCTCTGTGAGGGTCAACGCTATCTTGGAAAAGCTGTATAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CAA 90 bp ACATACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGCGCGGCTCCGGAAAGTaGGCACATGCGAAGGGGTCG +
Preference number: 5 (lower is better)
Translates to: TYTHTHMHTHTANTAQGMRGSGK*AHAKGS
Trigger: CGACCCCTTCGCATGTGCCAACTTTCCGGAGCCGCG...CATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGTATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CAA 90 bp CACTCTGTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACTCAGGCACCAGGTCTTaGTCCTCCTGGAAGATCTGC +
Preference number: 5 (lower is better)
Translates to: HSVISCTAVQGPDRFPGYSGTRS*SSWKIC
Trigger: GCAGATCTTCCAGGAGGACAAAGACCTGGTGCCTGA...GTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGACAGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CAA 90 bp CTCAGCCTTGGGGCTTGCTGGTATCAGTGGCTCCTTGGGCTCTGGTGCAAGGCTATGAACAGCGGTGCGTaGTTTTCGGAGTATTCTACA +
Preference number: 5 (lower is better)
Translates to: LSLGACWYQWLLGLWCKAMNSGA*FSEYST
Trigger: TGTAGAATACTCCGAAAACAACGCACCGCTGTTCAT...AGCCTTGCACCAGAGCCCAAGGAGCCACTGATACCAGCAAGCCCCAAGGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561922.1
CDS-3UTR CAA 90 bp ACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGCTCGCCGCCAGCGTCTTGTaGATGAGGGTGACCGTGTAC +
Preference number: 5 (lower is better)
Translates to: THTLTCIHTRLILLKAWLAASVL*MRVTVY
Trigger: GTACACGGTCACCCTCATCAACAAGACGCTGGCGGC...GAGCCATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CAA 90 bp TACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGCTCCGATGTTGATGGCGTaGCTGCGCTTGGGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: YTHTHMHTHTANTAQGMAPMLMA*LRLGSS
Trigger: GCTGGACCCCAAGCGCAGCAACGCCATCAACATCGG...AGCCATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CAA 90 bp ACATACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGCGTCCCCGGGTCTTGTaGCGCTCACGGTATGTGGCC +
Preference number: 5 (lower is better)
Translates to: TYTHTHMHTHTANTAQGMRPRVL*RSRYVA
Trigger: GGCCACATACCGTGAGCGCAACAAGACCCGGGGACG...CATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGTATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CAA 90 bp ACATACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGAGGATGGACACCAGATaGGCCCAGGGAGGAGCACCG +
Preference number: 5 (lower is better)
Translates to: TYTHTHMHTHTANTAQGMRMDTR*AQGGAP
Trigger: CGGTGCTCCTCCCTGGGCCAATCTGGTGTCCATCCT...CATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGTATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CAA 90 bp CTCAGCCTTGGGGCTTGCTGGTATCAGTGGCTCCTTGGGCTCTGGTGCAAGGCTTCAAACGGAAGCAGTTaGGTGAAGTTTGTAGATGCT +
Preference number: 5 (lower is better)
Translates to: LSLGACWYQWLLGLWCKASNGSS*VKFVDA
Trigger: AGCATCTACAAACTTCACCAAACTGCTTCCGTTTGA...AGCCTTGCACCAGAGCCCAAGGAGCCACTGATACCAGCAAGCCCCAAGGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568595.1
CDS GCA 90 bp GGTCAGGATAGGGAGAGGAAGGAGCACATACAGCTAAACCTACTTTaGTCACTGTTCAGCACAGGCCTGAAGGTGAGCCAACTGGGCTAT +
Preference number: 5 (lower is better)
Translates to: GQDRERKEHIQLNLL*SLFSTGLKVSQLGY
Trigger: ATAGCCCAGTTGGCTCACCTTCAGGCCTGTGCTGAACAGTGAGCAAAGTAGGTTTAGCTGTATGTGCTCCTTCCTCTCCCTATCCTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567752.5
CDS-3UTR CAA 90 bp ACATACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGAGGGGTATGTCAGGGTaGGCCAGCTGGGCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: TYTHTHMHTHTANTAQGMRGMSG*ASWASS
Trigger: TGAGGAAGCCCAGCTGGCCAACCCTGACATACCCCT...CATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGTATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CAA 90 bp ACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGGCTCAAGGCATGGAACCTATaGCAGACACGGCGGTGCACT +
Preference number: 5 (lower is better)
Translates to: THTLTCIHTRLILLKAWLKAWNL*QTRRCT
Trigger: AGTGCACCGCCGTGTCTGCAATAGGTTCCATGCCTT...GAGCCATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CAA 90 bp CAGCTGTTCCATACCCACTTTCAGGTCAAACAGTGGCTCAGCAATTTCCCGCTCCCTGAGGCATTGGTCTaGACCCCTCAGTCATCTCAA +
Preference number: 5 (lower is better)
Translates to: QLFHTHFQVKQWLSNFPLPEALV*TPQSSQ
Trigger: TTGAGATGACTGAGGGGTCAAGACCAATGCCTCAGG...GAGCGGGAAATTGCTGAGCCACTGTTTGACCTGAAAGTGGGTATGGAACAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567561.1
CDS GCA 90 bp CTGACAGCAAACTCATCAAAGTTGAGCAGAGCAGCCTTAATGACATaGACAGGTGGCAGTGTGGTTAGGCCGATGTTGATGGCGTTGCTG +
Preference number: 5 (lower is better)
Translates to: LTANSSKLSRAALMT*TGGSVVRPMLMALL
Trigger: CAGCAACGCCATCAACATCGGCCTAACCACACTGCCACCTGTGCATGTCATTAAGGCTGCTCTGCTCAACTTTGATGAGTTTGCTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258201.9
ENST00000567509.1
ENST00000567752.5
ENST00000569888.1
CDS-3UTR CAA 90 bp GTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACAGCACCGCAAACTCATCAAAGTaGAGCAGAGCAGCCTTAATG +
Preference number: 5 (lower is better)
Translates to: VISCTAVQGPDRFPGYSTANSSK*SRAALM
Trigger: CATTAAGGCTGCTCTGCTCAACTTTGATGAGTTTGC...GGTGCTGTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CAA 90 bp CTGTCATCTCCTGCACTGCAGTCCAGGGTCCAGATAGATTTCCGGGATACAGCAATGAACAGCGGTGCGTaGTTTTCGGAGTATTCTACA +
Preference number: 5 (lower is better)
Translates to: LSSPALQSRVQIDFRDTAMNSGA*FSEYST
Trigger: TGTAGAATACTCCGAAAACAACGCACCGCTGTTCAT...TGCTGTATCCCGGAAATCTATCTGGACCCTGGACTGCAGTGCAGGAGATGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CAA 90 bp ACATACACACACACTCACATGCATACACACACGGCTAATACTGCTCAAGGCATGTTTTCCAAGATAGCGTaGACCCTCACAGAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: TYTHTHMHTHTANTAQGMFSKIA*TLTESW
Trigger: CCAGCTCTCTGTGAGGGTCAACGCTATCTTGGAAAA...CATGCCTTGAGCAGTATTAGCCGTGTGTGTATGCATGTGAGTGTGTGTGTATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS-3UTR CAA 90 bp CCACTTTCAGGTCAAACAGTGGCTCAGCAATTTCCCGCTCCATGCTGTCATAGTGCAAACTCATCAAAGTaGAGCAGAGCAGCCTTAATG +
Preference number: 5 (lower is better)
Translates to: PLSGQTVAQQFPAPCCHSANSSK*SRAALM
Trigger: CATTAAGGCTGCTCTGCTCAACTTTGATGAGTTTGC...ACTATGACAGCATGGAGCGGGAAATTGCTGAGCCACTGTTTGACCTGAAAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567509.1
CDS GCA 72 bp AGCGGCGCTCCCAGCAGGCGGTGCACCGCGGGTATCTaGGCGCCCAAGGGCAGCGCCCCGTCCAGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: SGAPSRRCTAGI*APKGSAPSRLQ
Trigger: CTGCAGCCTGGACGGGGCGCTGCCCTTGGGCGCGCAGATACCCGCGGTGCACCGCCTGCTGGGAGCGCCGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258201.9
ENST00000561922.1
ENST00000567752.5
CDS GCA 72 bp GTATCTGCGCGCCCAAGGGCAGCGCCCCGTCCAGGCTaGAGGTGGGGGCCCGGCGCGGCTCCGGAAAGTTGG +
Preference number: 6 (lower is better)
Translates to: VSARPRAAPRPG*RWGPGAAPESW
Trigger: CCAACTTTCCGGAGCCGCGCCGGGCCCCCACCTGCAGCCTGGACGGGGCGCTGCCCTTGGGCGCGCAGATAC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258201.9
ENST00000561922.1
ENST00000567752.5
CDS GCA 72 bp CAATCCTCCAACTTGAGCGGCGCTCCCAGCAGGCGGTaGACCGCGGGTATCTGCGCGCCCAAGGGCAGCGCC +
Preference number: 6 (lower is better)
Translates to: QSSNLSGAPSRR*TAGICAPKGSA
Trigger: GGCGCTGCCCTTGGGCGCGCAGATACCCGCGGTGCACCGCCTGCTGGGAGCGCCGCTCAAGTTGGAGGATTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258201.9
ENST00000561922.1
ENST00000567752.5
CDS CCA 72 bp GGCTGCAGGTGGGGGCCCGGCGCGGCTCCGGAAAGTTaGCACATGCGAAGGGGTCGGTGTCTTCCAGGTACT +
Preference number: 6 (lower is better)
Translates to: GCRWGPGAAPES*HMRRGRCLPGT
Trigger: AGTACCTGGAAGACACCGACCCCTTCGCATGTGCCAACTTTCCGGAGCCGCGCCGGGCCCCCACCTGCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258201.9
ENST00000561922.1
ENST00000567752.5
CDS CAA 72 bp AGGCTGCAGGTGGGGGCCCGGCGCGGCTCCGGAAAGTaGGCACATGCGAAGGGGTCGGTGTCTTCCAGGTAC +
Preference number: 6 (lower is better)
Translates to: RLQVGARRGSGK*AHAKGSVSSRY
Trigger: GTACCTGGAAGACACCGACCCCTTCGCATGTGCCAACTTTCCGGAGCCGCGCCGGGCCCCCACCTGCAGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258201.9
ENST00000561922.1
ENST00000567752.5
CDS GCA 72 bp CCGGCCCTGGGCCAGCGCAACCTGCTTCTCTGTTTCTaGTGCCGCCACATTCTCCAGGAACCGGGCTCTGAG +
Preference number: 6 (lower is better)
Translates to: PALGQRNLLLCF*CRHILQEPGSE
Trigger: CTCAGAGCCCGGTTCCTGGAGAATGTGGCGGCAGCAGAAACAGAGAAGCAGGTTGCGCTGGCCCAGGGCCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562266.1
CDS GCA 72 bp CCGGCCCTGGGCCAGCGCAACCTGCTTCTCTGTTTCTaGTGCCGCCACATTCTCCAGGAACCGGGCTCAAAC +
Preference number: 6 (lower is better)
Translates to: PALGQRNLLLCF*CRHILQEPGSN
Trigger: GTTTGAGCCCGGTTCCTGGAGAATGTGGCGGCAGCAGAAACAGAGAAGCAGGTTGCGCTGGCCCAGGGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568595.1
CDS CAA 72 bp TGGCGTTGCTGCGCTTGGGGTCCAGCACTGTGGTCATaGTCCGGCGGCCCTCTCCAGCTTTCTTGGAGGGCA +
Preference number: 6 (lower is better)
Translates to: WRCCAWGPALWS*SGGPLQLSWRA
Trigger: TGCCCTCCAAGAAAGCTGGAGAGGGCCGCCGGACAATGACCACAGTGCTGGACCCCAAGCGCAGCAACGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258201.9
ENST00000567509.1
ENST00000567752.5
ENST00000569888.1
CDS CAA 72 bp GGGGAGCTGCTCTGGACCATGCCTCTGCTGCGGCGATaGTGTGTGGTGTCCTCAGGCCTGCTGGTCAGCAGA +
Preference number: 6 (lower is better)
Translates to: GELLWTMPLLRR*CVVSSGLLVSR
Trigger: TCTGCTGACCAGCAGGCCTGAGGACACCACACACAATCGCCGCAGCAGAGGCATGGTCCAGAGCAGCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258201.9
ENST00000567752.5
ENST00000569085.1
CDS CAA 90 bp ACAGGTGGCAGTGTGGTTAGGCCGATGTTGATGGCGTTGCTGCGCTaGGGGTCCAGCACTGTGGTCATTGTCCGGCGGCCCTCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: TGGSVVRPMLMALLR*GSSTVVIVRRPSPA
Trigger: AGCTGGAGAGGGCCGCCGGACAATGACCACAGTGCTGGACCCCAAGCGCAGCAACGCCATCAACATCGGCCTAACCACACTGCCACCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258201.9
ENST00000567509.1
ENST00000567752.5
ENST00000569888.1
CDS GCA 72 bp CGCCACATTCTCCAGGAACCGGGCTCTGAGGGAAGGTaGTTGTCACTGACAGCGTCTGACACACCCCAGCCC +
Preference number: 6 (lower is better)
Translates to: RHILQEPGSEGR*LSLTASDTPQP
Trigger: GGGCTGGGGTGTGTCAGACGCTGTCAGTGACAAGCACCTTCCCTCAGAGCCCGGTTCCTGGAGAATGTGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562266.1
CDS GCA 72 bp TGCCAAGCCCATGCCCACCACCAGAGGGACAGGAAATaGCCACCTACCAAAGGAGAAGGCCAGACCTCCCCC +
Preference number: 6 (lower is better)
Translates to: CQAHAHHQRDRK*PPTKGEGQTSP
Trigger: GGGGGAGGTCTGGCCTTCTCCTTTGGTAGGTGGGCATTTCCTGTCCCTCTGGTGGTGGGCATGGGCTTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569888.1
CDS CAA 72 bp AGTGTGGTTAGGCCGATGTTGATGGCGTTGCTGCGCTaGGGGTCCAGCACTGTGGTCATTGTCCGGCGGCCC +
Preference number: 6 (lower is better)
Translates to: SVVRPMLMALLR*GSSTVVIVRRP
Trigger: GGGCCGCCGGACAATGACCACAGTGCTGGACCCCAAGCGCAGCAACGCCATCAACATCGGCCTAACCACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258201.9
ENST00000567509.1
ENST00000567752.5
ENST00000569888.1
CDS CAA 72 bp AGCTCAAAGCCGCTGCTCTGGGAGCCATTGAGGAAGTaGCCCACCGCTAGGAGGGTAGCCAGGATGCAGCGG +
Preference number: 6 (lower is better)
Translates to: SSKPLLWEPLRK*PTARRVARMQR
Trigger: CCGCTGCATCCTGGCTACCCTCCTAGCGGTGGGCAACTTCCTCAATGGCTCCCAGAGCAGCGGCTTTGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258201.9
ENST00000567752.5
CDS CAA 90 bp ATGACATGCACAGGTGGCAGTGTGGTTAGGCCGATGTTGATGGCGTaGCTGCGCTTGGGGTCCAGCACTGTGGTCATTGTCCGGCGGCCC +
Preference number: 6 (lower is better)
Translates to: MTCTGGSVVRPMLMA*LRLGSSTVVIVRRP
Trigger: GGGCCGCCGGACAATGACCACAGTGCTGGACCCCAAGCGCAGCAACGCCATCAACATCGGCCTAACCACACTGCCACCTGTGCATGTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258201.9
ENST00000567509.1
ENST00000567752.5
ENST00000569888.1
CDS CAA 90 bp TGCTGCCGCCACATTCTCCAGGAACCGGGCTCTGAGGGAAGGTGCTaGTCACTGACAGCGTCTGACACACCCCAGCCCAGGTGTACATGC +
Preference number: 6 (lower is better)
Translates to: CCRHILQEPGSEGRC*SLTASDTPQPRCTC
Trigger: GCATGTACACCTGGGCTGGGGTGTGTCAGACGCTGTCAGTGACAAGCACCTTCCCTCAGAGCCCGGTTCCTGGAGAATGTGGCGGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562266.1
CDS TCA 72 bp GTCCACCTTGGCACAGCGGGTCAGGGCAGGGATTTCTaGATAGAGGTCAGAGGACTCAGGCCGGGTCTGGAG +
Preference number: 6 (lower is better)
Translates to: VHLGTAGQGRDF*IEVRGLRPGLE
Trigger: CTCCAGACCCGGCCTGAGTCCTCTGACCTCTATTCAGAAATCCCTGCCCTGACCCGCTGTGCCAAGGTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258201.9
ENST00000567752.5
CDS TCA 72 bp TCAGGCCTGCTGGTCAGCAGACTCTTCATACTAGCATaGCTGTCAGCATCTCCCCGGCCTGGCCCGCTGCTC +
Preference number: 6 (lower is better)
Translates to: SGLLVSRLFILA*LSASPRPGPLL
Trigger: GAGCAGCGGGCCAGGCCGGGGAGATGCTGACAGTCATGCTAGTATGAAGAGTCTGCTGACCAGCAGGCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258201.9
ENST00000567752.5
ENST00000569085.1
CDS GCA 72 bp TTGGCACATGCGAAGGGGTCGGTGTCTTCCAGGTACTaGACCCTCACGGTCACCACTGATACCGGCTCTCCG +
Preference number: 6 (lower is better)
Translates to: LAHAKGSVSSRY*TLTVTTDTGSP
Trigger: CGGAGAGCCGGTATCAGTGGTGACCGTGAGGGTGCAGTACCTGGAAGACACCGACCCCTTCGCATGTGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258201.9
ENST00000561922.1
ENST00000567752.5
CDS GCA 72 bp ACCTCCAGGCCAGGACCCTTGCTTAGTCCCAGTGCCTaGACCAGGTCATCTCCGAGCCCACTCTTCAACGTC +
Preference number: 6 (lower is better)
Translates to: TSRPGPLLSPSA*TRSSPSPLFNV
Trigger: GACGTTGAAGAGTGGGCTCGGAGATGACCTGGTGCAGGCACTGGGACTAAGCAAGGGTCCTGGCCTGGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258201.9
ENST00000567752.5
ENST00000569085.1
CDS CCA 72 bp GGCCCTCTCCAGCTTTCTTGGAGGGCAGCACCTCTTTaGCACGAGACTCAAAGAGGTGTTCCAGTCGGGCCG +
Preference number: 6 (lower is better)
Translates to: GPLQLSWRAAPL*HETQRGVPVGP
Trigger: CGGCCCGACTGGAACACCTCTTTGAGTCTCGTGCCAAAGAGGTGCTGCCCTCCAAGAAAGCTGGAGAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258201.9
ENST00000567509.1
ENST00000567752.5
ENST00000569888.1
CDS CCA 72 bp GACTCAGGCCGGGTCTGGAGCACTAGGGAGCAGAGATaGTGTAGCAGTGACTGTCGACGCACCGTGTCCTTC +
Preference number: 6 (lower is better)
Translates to: DSGRVWSTREQR*CSSDCRRTVSF
Trigger: GAAGGACACGGTGCGTCGACAGTCACTGCTACACCATCTCTGCTCCCTAGTGCTCCAGACCCGGCCTGAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258201.9
ENST00000567752.5
CDS CCA 72 bp TCATGCGTCCCCGGGTCTTGTTGCGCTCACGGTATGTaGCCTGCTTCTGCTGCTGCTGTAGCACTCGTTCCC +
Preference number: 6 (lower is better)
Translates to: SCVPGSCCAHGM*PASAAAVALVP
Trigger: GGGAACGAGTGCTACAGCAGCAGCAGAAGCAGGCCACATACCGTGAGCGCAACAAGACCCGGGGACGCATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258201.9
ENST00000566006.1
ENST00000567752.5
CDS CCA 72 bp ACACCCTGTAGACAAGACATGGCCCGAGGCTGCTTCTaGGCCAGAGTGGCCAGCTTGGGCCCTAAGGACACA +
Preference number: 6 (lower is better)
Translates to: TPCRQDMARGCF*ARVASLGPKDT
Trigger: TGTGTCCTTAGGGCCCAAGCTGGCCACTCTGGCCCAGAAGCAGCCTCGGGCCATGTCTTGTCTACAGGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566006.1
CDS CAA 72 bp CGGCCCTCTCCAGCTTTCTTGGAGGGCAGCACCTCTTaGGCACGAGACTCAAAGAGGTGTTCCAGTCGGGCC +
Preference number: 6 (lower is better)
Translates to: RPSPAFLEGSTS*ARDSKRCSSRA
Trigger: GGCCCGACTGGAACACCTCTTTGAGTCTCGTGCCAAAGAGGTGCTGCCCTCCAAGAAAGCTGGAGAGGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258201.9
ENST00000567509.1
ENST00000567752.5
ENST00000569888.1
CDS CAA 72 bp CACATTCTCCAGGAACCGGGCTCTGAGGGAAGGTGCTaGTCACTGACAGCGTCTGACACACCCCAGCCCAGG +
Preference number: 6 (lower is better)
Translates to: HILQEPGSEGRC*SLTASDTPQPR
Trigger: CCTGGGCTGGGGTGTGTCAGACGCTGTCAGTGACAAGCACCTTCCCTCAGAGCCCGGTTCCTGGAGAATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562266.1
CDS TCA 72 bp TCCAGGAACCGGGCTCTGAGGGAAGGTGCTTGTCACTaGCAGCGTCTGACACACCCCAGCCCAGGTGTACAT +
Preference number: 6 (lower is better)
Translates to: SRNRALREGACH*QRLTHPSPGVH
Trigger: ATGTACACCTGGGCTGGGGTGTGTCAGACGCTGTCAGTGACAAGCACCTTCCCTCAGAGCCCGGTTCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562266.1
CDS GCA 72 bp GTCATCTCCGAGCCCACTCTTCAACGTCCTTCTCACTaGAGGGACAGAGCAGGGTTGGAGGGGGTTGATGGG +
Preference number: 6 (lower is better)
Translates to: VISEPTLQRPSH*RDRAGLEGVDG
Trigger: CCCATCAACCCCCTCCAACCCTGCTCTGTCCCTGCAGTGAGAAGGACGTTGAAGAGTGGGCTCGGAGATGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569085.1
CDS CCA 72 bp CTTCATACTAGCATGACTGTCAGCATCTCCCCGGCCTaGCCCGCTGCTCACTGCTACTGGGACAGAGGGGTT +
Preference number: 6 (lower is better)
Translates to: LHTSMTVSISPA*PAAHCYWDRGV
Trigger: AACCCCTCTGTCCCAGTAGCAGTGAGCAGCGGGCCAGGCCGGGGAGATGCTGACAGTCATGCTAGTATGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258201.9
ENST00000567752.5
ENST00000569085.1
CDS CCA 72 bp GACAAGACATGGCCCGAGGCTGCTTCTGGGCCAGAGTaGCCAGCTTGGGCCCTAAGGACACAGACATCCAAA +
Preference number: 6 (lower is better)
Translates to: DKTWPEAASGPE*PAWALRTQTSK
Trigger: TTTGGATGTCTGTGTCCTTAGGGCCCAAGCTGGCCACTCTGGCCCAGAAGCAGCCTCGGGCCATGTCTTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566006.1
CDS CAA 72 bp CAGCTCGGTGTCCAGGTAGTATCCGGAGGGAGACACTaGCAGAGCACAATCCTCCAACTTGAGCGGCGCTCC +
Preference number: 6 (lower is better)
Translates to: QLGVQVVSGGRH*QSTILQLERRS
Trigger: GGAGCGCCGCTCAAGTTGGAGGATTGTGCTCTGCAAGTGTCTCCCTCCGGATACTACCTGGACACCGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258201.9
ENST00000561922.1
ENST00000567752.5
CDS CAA 72 bp TTCTCTGTCTCGGTGATCATGCGTCCCCGGGTCTTGTaGCGCTCACGGTATGTGGCCTGCTTCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: FSVSVIMRPRVL*RSRYVACFCCC
Trigger: GCAGCAGCAGAAGCAGGCCACATACCGTGAGCGCAACAAGACCCGGGGACGCATGATCACCGAGACAGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258201.9
ENST00000567752.5
CDS CAA 72 bp GTCCTTCTCAAAGACTTGCGGTTGCCGCGGGAACGCTaGCGTTCCCTAGCAGCTAAGGCACGAGGACTGCTC +
Preference number: 6 (lower is better)
Translates to: VLLKDLRLPRER*RSLAAKARGLL
Trigger: GAGCAGTCCTCGTGCCTTAGCTGCTAGGGAACGCAAGCGTTCCCGCGGCAACCGCAAGTCTTTGAGAAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258201.9
ENST00000567752.5
CDS CAA 90 bp CCTGAGAACTTCTCTGTCTCGGTGATCATGCGTCCCCGGGTCTTGTaGCGCTCACGGTATGTGGCCTGCTTCTGCTGCTGCTGTAGCACT +
Preference number: 6 (lower is better)
Translates to: PENFSVSVIMRPRVL*RSRYVACFCCCCST
Trigger: AGTGCTACAGCAGCAGCAGAAGCAGGCCACATACCGTGAGCGCAACAAGACCCGGGGACGCATGATCACCGAGACAGAGAAGTTCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258201.9
ENST00000567752.5
CDS CAA 90 bp ACACCTGAGAACTTCTCTGTCTCGGTGATCATGCGTCCCCGGGTCTaGTTGCGCTCACGGTATGTGGCCTGCTTCTGCTGCTGCTGTAGC +
Preference number: 6 (lower is better)
Translates to: TPENFSVSVIMRPRV*LRSRYVACFCCCCS
Trigger: GCTACAGCAGCAGCAGAAGCAGGCCACATACCGTGAGCGCAACAAGACCCGGGGACGCATGATCACCGAGACAGAGAAGTTCTCAGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258201.9
ENST00000567752.5
CDS GCA 72 bp GCACCCACACGGATCAGGCAGCTCAGCCCCTCTGAATaGACAAATTCAGGCACCAGGTCTTTGTCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: APTRIRQLSPSE*TNSGTRSLSSW
Trigger: CCAGGAGGACAAAGACCTGGTGCCTGAATTTGTGCATTCAGAGGGGCTGAGCTGCCTGATCCGTGTGGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS CAA 72 bp ACAGGTGGCAGTGTGGTTAGGCCGATGTTGATGGCGTaGCTGCGCTTGGGGTCCAGCACTGTGGTCATTGTC +
Preference number: 6 (lower is better)
Translates to: TGGSVVRPMLMA*LRLGSSTVVIV
Trigger: GACAATGACCACAGTGCTGGACCCCAAGCGCAGCAACGCCATCAACATCGGCCTAACCACACTGCCACCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258201.9
ENST00000567509.1
ENST00000567752.5
ENST00000569888.1
CDS CAA 72 bp AACTTCTCTGTCTCGGTGATCATGCGTCCCCGGGTCTaGTTGCGCTCACGGTATGTGGCCTGCTTCTGCTGC +
Preference number: 6 (lower is better)
Translates to: NFSVSVIMRPRV*LRSRYVACFCC
Trigger: GCAGCAGAAGCAGGCCACATACCGTGAGCGCAACAAGACCCGGGGACGCATGATCACCGAGACAGAGAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258201.9
ENST00000567752.5
CDS CAA 72 bp GGTTACTTACAAGACTTGCGGTTGCCGCGGGAACGCTaGCGTTCCCTAGCAGCTAAGGCACGAGGACTGCTC +
Preference number: 6 (lower is better)
Translates to: GYLQDLRLPRER*RSLAAKARGLL
Trigger: GAGCAGTCCTCGTGCCTTAGCTGCTAGGGAACGCAAGCGTTCCCGCGGCAACCGCAAGTCTTGTAAGTAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569085.1
CDS CAA 72 bp CATGGCCCCCTCAATGCAGGCCTGAGGCCTGAGGCATaGGTCTTGACCCCTCAGTCATCTCAATGCCATCCT +
Preference number: 6 (lower is better)
Translates to: HGPLNAGLRPEA*VLTPQSSQCHP
Trigger: AGGATGGCATTGAGATGACTGAGGGGTCAAGACCAATGCCTCAGGCCTCAGGCCTGCATTGAGGGGGCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567561.1
CDS CAA 90 bp GCAGCCTTAATGACATGCACAGGTGGCAGTGTGGTTAGGCCGATGTaGATGGCGTTGCTGCGCTTGGGGTCCAGCACTGTGGTCATTGTC +
Preference number: 6 (lower is better)
Translates to: AALMTCTGGSVVRPM*MALLRLGSSTVVIV
Trigger: GACAATGACCACAGTGCTGGACCCCAAGCGCAGCAACGCCATCAACATCGGCCTAACCACACTGCCACCTGTGCATGTCATTAAGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258201.9
ENST00000567509.1
ENST00000567752.5
ENST00000569888.1
CDS CAA 90 bp CTCTTCAACGTCCTTCTCAAAGACTTGCGGTTGCCGCGGGAACGCTaGCGTTCCCTAGCAGCTAAGGCACGAGGACTGCTCTTGGTCACT +
Preference number: 6 (lower is better)
Translates to: LFNVLLKDLRLPRER*RSLAAKARGLLLVT
Trigger: AGTGACCAAGAGCAGTCCTCGTGCCTTAGCTGCTAGGGAACGCAAGCGTTCCCGCGGCAACCGCAAGTCTTTGAGAAGGACGTTGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258201.9
ENST00000567752.5
CDS TCA 72 bp AGCAGCACCCACACGGATCAGGCAGCTCAGCCCCTCTaGATGCACAAATTCAGGCACCAGGTCTTTGTCCTC +
Preference number: 6 (lower is better)
Translates to: SSTHTDQAAQPL*MHKFRHQVFVL
Trigger: GAGGACAAAGACCTGGTGCCTGAATTTGTGCATTCAGAGGGGCTGAGCTGCCTGATCCGTGTGGGTGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258201.9
ENST00000567752.5
CDS CCA 72 bp AGCTTTTCCAAGATAGCGTTGACCCTCACAGAGAGCTaGGTCCGAAGGATCAGCGTGGGCTTCCGCCCTTTG +
Preference number: 6 (lower is better)
Translates to: SFSKIALTLTES*VRRISVGFRPL
Trigger: CAAAGGGCGGAAGCCCACGCTGATCCTTCGGACCCAGCTCTCTGTGAGGGTCAACGCTATCTTGGAAAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258201.9
CDS CCA 72 bp CCTCAATCTTCTGCCGCTCTTCCTCCGTGGGCATCATaGTCAGTAGCTTCTGAGGATGTAGCCAGAGCCTCA +
Preference number: 6 (lower is better)
Translates to: PQSSAALPPWAS*SVASEDVARAS
Trigger: TGAGGCTCTGGCTACATCCTCAGAAGCTACTGACCATGATGCCCACGGAGGAAGAGCGGCAGAAGATTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567509.1
CDS CAA 90 bp CGGGAACGCTTGCGTTCCCTAGCAGCTAAGGCACGAGGACTGCTCTaGGTCACTGACTGCACCAGAAGGTCCATGATCTCATCTGATGTA +
Preference number: 6 (lower is better)
Translates to: RERLRSLAAKARGLL*VTDCTRRSMISSDV
Trigger: TACATCAGATGAGATCATGGACCTTCTGGTGCAGTCAGTGACCAAGAGCAGTCCTCGTGCCTTAGCTGCTAGGGAACGCAAGCGTTCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258201.9
ENST00000567752.5
ENST00000569085.1
CDS CCA 72 bp TTCAGGCACCAGGTCTTTGTCCTCCTAGAGGCACCATaGGGGAGTTTAGGGAAGCTTGGGCTACACACTTAC +
Preference number: 6 (lower is better)
Translates to: FRHQVFVLLEAP*GSLGKLGLHTY
Trigger: GTAAGTGTGTAGCCCAAGCTTCCCTAAACTCCCCCATGGTGCCTCTAGGAGGACAAAGACCTGGTGCCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567752.5
CDS CAA 72 bp TTGCGTTCCCTAGCAGCTAAGGCACGAGGACTGCTCTaGGTCACTGACTGCACCAGAAGGTCCATGATCTCA +
Preference number: 6 (lower is better)
Translates to: LRSLAAKARGLL*VTDCTRRSMIS
Trigger: TGAGATCATGGACCTTCTGGTGCAGTCAGTGACCAAGAGCAGTCCTCGTGCCTTAGCTGCTAGGGAACGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258201.9
ENST00000567752.5
ENST00000569085.1
CDS CCA 72 bp TCAGTGAGAAGAGGGAGCGGCGGAGCTCAGGACCACTaGAGCTATACAGCTTTTCTGCAAAAGGTAGGGTAT +
Preference number: 6 (lower is better)
Translates to: SVRRGSGGAQDH*SYTAFLQKVGY
Trigger: ATACCCTACCTTTTGCAGAAAAGCTGTATAGCTCCAGTGGTCCTGAGCTCCGCCGCTCCCTCTTCTCACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561922.1
ENST00000567752.5
CDS CAA 90 bp GCCAGAGCCTCAATGCCATCCTTGCTGACAGCAAACTCATCAAAGTaGAGCAGAGCAGCCTTAATGACATGCACAGGTGGCAGTGTGGTT +
Preference number: 6 (lower is better)
Translates to: ARASMPSLLTANSSK*SRAALMTCTGGSVV
Trigger: AACCACACTGCCACCTGTGCATGTCATTAAGGCTGCTCTGCTCAACTTTGATGAGTTTGCTGTCAGCAAGGATGGCATTGAGGCTCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567509.1
CDS TCA 72 bp TACTGGGGGAAGTGGCAGTTAAACAGACCCAAAGACTaGGTAGGTGTGGCCAGGCCAATAGAGGAAAGAGCA +
Preference number: 6 (lower is better)
Translates to: YWGKWQLNRPKD*VGVARPIEERA
Trigger: TGCTCTTTCCTCTATTGGCCTGGCCACACCTACTCAGTCTTTGGGTCTGTTTAACTGCCACTTCCCCCAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566006.1
CDS CAA 90 bp GACCTCACCTCAATGCCATCCTTGCTGACAGCAAACTCATCAAAGTaGAGCAGAGCAGCCTTAATGACATGCACAGGTGGCAGTGTGGTT +
Preference number: 6 (lower is better)
Translates to: DLTSMPSLLTANSSK*SRAALMTCTGGSVV
Trigger: AACCACACTGCCACCTGTGCATGTCATTAAGGCTGCTCTGCTCAACTTTGATGAGTTTGCTGTCAGCAAGGATGGCATTGAGGTGAGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569888.1
CDS TCA 72 bp CATAGACTAGTGCAAGAGACACAAGTCCATCTGATGTaGATGGGGAGCAGAAGGTTTACTGGGGGAAGTGGC +
Preference number: 6 (lower is better)
Translates to: HRLVQETQVHLM*MGSRRFTGGSG
Trigger: GCCACTTCCCCCAGTAAACCTTCTGCTCCCCATTCACATCAGATGGACTTGTGTCTCTTGCACTAGTCTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566006.1
CDS CAA 72 bp TCAATGCCATCCTTGCTGACAGCAAACTCATCAAAGTaGAGCAGAGCAGCCTTAATGACATGCACAGGTGGC +
Preference number: 6 (lower is better)
Translates to: SMPSLLTANSSK*SRAALMTCTGG
Trigger: GCCACCTGTGCATGTCATTAAGGCTGCTCTGCTCAACTTTGATGAGTTTGCTGTCAGCAAGGATGGCATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258201.9
ENST00000567509.1
ENST00000567752.5
ENST00000569888.1
CDS CAA 90 bp AGTAGCTTCTCAATGCCATCCTTGCTGACAGCAAACTCATCAAAGTaGAGCAGAGCAGCCTTAATGACATGCACAGGTGGCAGTGTGGTT +
Preference number: 6 (lower is better)
Translates to: SSFSMPSLLTANSSK*SRAALMTCTGGSVV
Trigger: AACCACACTGCCACCTGTGCATGTCATTAAGGCTGCTCTGCTCAACTTTGATGAGTTTGCTGTCAGCAAGGATGGCATTGAGAAGCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258201.9
ENST00000567752.5